Citrus Sinensis ID: 003836

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790--
Protein Sequence
MAFHLLSLLFLLLLPCLTAAQSNGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAVNPAPRGSKLRLTANRGLVLEDPEGREIWKSEISTGQAAFGVLYDTGNFLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWSNTFDTNRSNAGYRVVFNESGQLYVLRENKQRASLVPETVSAKENYLRATLNFDGVFIFYSHPKNNSTGDAIWSVSDVLPENICINNDIRKGLGSGICGFNSICSISGAKRPICQCPKGFSLLDPDDAYGSCKPDFILGCEEDGKKSGEDLYYIEELRNTDWPTSDYEQISPYGKDECVSSCLKDCQCSAAVLRDDTCWKKKLPLSYGKTDRDETGTTFIKIRKVPSGGKKKVDVLIPVVSVLFGSSALINLLLVSACCLGFLVVNRKKFMRPHQEDQGVSYMNLRCFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPIPPCPWTLNITS
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEcccccEEEEEEcccccccEEEEEEEEccccccEEEEcccccccccccEEEEEEcccEEEEcccccEEEEcccccccccEEEEEccccEEEEccccccEEccccccccccccccccccccEEEEccccccccccEEEEEEEccccEEEEEEEcccccccccccccccccccccccccEEEEcccccEEEEEccccEEEEEEEEccccccEEEEEEcccccEEEEEEccccccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccccccccccccccHHHHHHHHHcccccEEEEEccccccccccccccccccccccccEEEEEEcccccccccccccccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEHHHHHHHHcccccccccccccccEEEEEccccccEEEEEEcccccHHHHHHHHHHHHHHHHHcccccccEEEEEcccccEEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEccccccccccccccccccccccccccccccccccccEEEccccccHHHHccccccEEEEEEEEcEEEEEEEEEcccccccccccccccHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEccccEEEEEEEcccccccEEEEEEEEcccccEEEEEEcccccccccccEEEEcccEEEEEEccccEEEEEccccccccEEEEEccccEEEEEccccEEEEEccccccccccccccccccEEEccccccccccccEEEEEccccccEEEEEEcccEEEEEEcccccEEEEcccccccccccccccEEEEEEEccccEEEEEEEEEcccEEEEEEEccccEEEEEEEEccccccEEEEEEEEccccccccccccccccEHHccccccEEccccccccccccccccccccccccccccEEccEcEcccccccccccccEEEEEcccccccccHHHHccccHHHHHHHHHHcccEEEEEEcccccccccEEEEEccHccccccccEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEcHHHHHHHHHccHHHccccccccEEEcEccccccEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEcccccHcHHEcccccccHHHHHHHHHHHHHHHHHHHHccccEEEcccccHHHEEEcccccEEEccccccEEcccccEEcccccccccccccHHHHHHcEEcHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHccccHHHccHHHcccccHHHHHHHHHHHHHHHcccccccccHHHHHHEccccccccccccccEEEEcc
Coil and Loop (DISEMBL)
MAFHLLSLLFLLLLPcltaaqsngtisigqqltaaestepwlspskdfalgfhqldskdlflpaiwyykipskTIVWYASavnpaprgsklrltanrglvledpegreiwKSEISTGQAAFGVLYDTGNFLIVNtnserlwqsfdhptdtllptqtmerggvvssrrkdtyfsrgrfQFRLLEDGNAVLNTINlesgfaydayfwsntfdtnrsnagyRVVFNESGQLYVLREnkqraslvpetvSAKENYLRATLNFDGVFIfyshpknnstgdaiwsvsdvlpenicinndirkglgsgicgfnsicsisgakrpicqcpkgfslldpddaygsckpdfilgceedgkksgEDLYYIEElrntdwptsdyeqispygkdecvssclkdcqcsaavlrddtcwkkklplsygktdrdetgttfikirkvpsggkkkvdvlIPVVSVLFGSSALINLLLVSACCLGFLVvnrkkfmrphqedqgvsymnlrCFTYKELVEVTRGFkeelgrgafgtVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSngtvasflfgdskpnwkLRTEIAMGIAGGLFYLHEECCtqiihcdikpqnillddhynarisDFGLAKLLTLdqshtntairgtkgyvapewfrnmpitvkvDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCiqedpshrptmRKVTQMLEGvvevpippcpwtlnits
Flexible Loop (DISEMBL)
MAFHLLSLLFLLLLPCLTAAQSNGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAVnpaprgsklrltanrglvledpegreIWKSEISTGQAAFGVLYDTGNFLIVNTNSERLWQSfdhptdtllptqtmerggvvssrrkdtyfsRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWSNTFDTNRSNAGYRVVFNESGQLYVLRENKQRASLVPETVSAKENYLRATLNFDGVFIFYSHPKNNSTGDAIWSVSDVLPENICINNDIRKGLGSGICGFNSICSISGAKRPICQCPKGFSLLDPDDAYGSCKPDFILGCEEDGKKSGEDLYYIEELrntdwptsdYEQISPYGKDECVSSCLKDCQCSAavlrddtcwkkklplsygktdrdetgttfikirkvpsggkkkvdVLIPVVSVLFGSSALINLLLVSACCLGFLVVNRKkfmrphqedqgvsymnlRCFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLdqshtntairgtkgyvapewfrnMPITVKVDVYSYGVLLLEIICLRrnidneiskvdkailtdWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEgvvevpippcpwtlnits
Low Complexity Region (SEG)
MAFHllsllfllllpclTAAQSNGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAVNPAPRGSKLRLTANRGLVLEDPEGREIWKSEISTGQAAFGVLYDTGNFLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWSNTFDTNRSNAGYRVVFNESGQLYVLRENKQRASLVPETVSAKENYLRATLNFDGVFIFYSHPKNNSTGDAIWSVSDVLPENICINNDIRKGLGSGICGFNSICSISGAKRPICQCPKGFSLLDPDDAYGSCKPDFILGCEEDGKKSGEDLYYIEELRNTDWPTSDYEQISPYGKDECVSSCLKDCQCSAAVLRDDTCWKKKLPLSYGKTDRDETGTTFIKIRKVPSGGKKKVDVLIPVVSVLFGSSALINLLLVSACCLGFLVVNRKKFMRPHQEDQGVSYMNLRCFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPIPPCPWTLNITS
Disordered region (IsUnstruct)
**FHLLSLLFLLLLPCLTAAQSNGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAVNPAPRGSKLRLTANRGLVLEDPEGREIWKSEISTGQAAFGVLYDTGNFLIVNTNSERLWQSFDHPTDTLLP********VV***RKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWSNTFDTNRSNAGYRVVFNESGQLYVLRENKQRASLVPETVSAKENYLRATLNFDGVFIFYSHPKNNSTGDAIWSVSDVLPENICINNDIRKGLGSGICGFNSICSISGAKRPICQCPKGFSLLDPDDAYGSCKPDFILGCEEDGKKSGEDLYYIEELRNTDWPTSDYEQISPYGKDECVSSCLKDCQCSAAVLRDDTCWKKKLPLSYGKTDRDETGTTFIKIRKVPSGGKKKVDVLIPVVSVLFGSSALINLLLVSACCLGFLVVNRKKFMRPHQEDQGVSYMNLRCFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQED*******RKVTQMLEGVVEVPIPPCPWTLN***
Disordered Region (DISOPRED)
MAFHLLSLLFLLLLPCLTAAQSNGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAVNPAPRGSKLRLTANRGLVLEDPEGREIWKSEIS****AFGVLYDTGNFLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWSNTFDTNRSNAGYRVVFNESGQLYVLRENKQRASLVPETVSAKENYLRATLNFDGVFIFYSHPKNNSTGDAIWSVSDVLPENICINNDIRKGLGSGICGFNSICSISGAKRPICQCPKGFSLLDPDDAYGSCK**FI*************LYYIEELRNTDWPTSDYEQISPYGKDECVSSCLKDCQCSAAVLRDDTCWKKKLPLSYGKTDRDETGTTFI*******************VSVLFGSSALINLLLVSACCLGFLVVN********************CFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNI******VDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPIPPCPWTLNI**
Disordered Region (DISEMBL)
MAFHLLSLLFLLLLPCLTAAQSNGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAVNPAPRGSKLRLTANRGLVLEDPEGREIWKSEISTGQAAFGVLYDTGNFLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWSNTFDTNRSNAGYRVVFNESGQLYVLRENKQRASLVPETVSAKENYLRATLNFDGVFIFYSHPKNNSTGDAIWSVSDVLPENICINNDIRKGLGSGICGFNSICSISGAKRPICQCPKGFSLLDPDDAYGSCKPDFILGCEEDGKKSGEDLYYIEELRNTDWPTSDYEQISPYGKDECVSSCLKDCQCSAAVLRDDTCWKKKLPLSYGKTDRDETGTTFIKIRKVPSGGKKKVDVLIPVVSVLFGSSALINLLLVSACCLGFLVVNRKKFMRPHQEDQGVSYMNLRCFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPIPPCPWTLNITS
Disordered Region (DISPRO)
MAFHLLSLLFLLLLPCLTAAQSNGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAVNPAPRGSKLRLTANRGLVLEDPEGREIWKSEISTGQAAFGVLYDTGNFLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWSNTFDTNRSNAGYRVVFNESGQLYVLRENKQRASLVPETVSAKENYLRATLNFDGVFIFYSHPKNNSTGDAIWSVSDVLPENICINNDIRKGLGSGICGFNSICSISGAKRPICQCPKGFSLLDPDDAYGSCKPDFILGCEEDGKKSGEDLYYIEELRNTDWPTSDYEQISPYGKDECVSSCLKDCQCSAAVLRDDTCWKKKLPLSYGKTDRDETGTTFIKIRKVPSGGKKKVDVLIPVVSVLFGSSALINLLLVSACCLGFLVVNRKKF**********SYMNLRCFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPIPPCPWTLNIT*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAFHLLSLLFLLLLPCLTAAQSNGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAVNPAPRGSKLRLTANRGLVLEDPEGREIWKSEISTGQAAFGVLYDTGNFLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWSNTFDTNRSNAGYRVVFNESGQLYVLRENKQRASLVPETVSAKENYLRATLNFDGVFIFYSHPKNNSTGDAIWSVSDVLPENICINNDIRKGLGSGICGFNSICSISGAKRPICQCPKGFSLLDPDDAYGSCKPDFILGCEEDGKKSGEDLYYIEELRNTDWPTSDYEQISPYGKDECVSSCLKDCQCSAAVLRDDTCWKKKLPLSYGKTDRDETGTTFIKIRKVPSGGKKKVDVLIPVVSVLFGSSALINLLLVSACCLGFLVVNRKKFMRPHQEDQGVSYMNLRCFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPIPPCPWTLNITS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	792	2.2.26 [Sep-21-2011]
Q39202	832	G-type lectin S-receptor-	yes	no	0.962	0.915	0.466	0.0
Q9FLV4	872	G-type lectin S-receptor-	no	no	0.945	0.858	0.334	1e-109
Q9XID3	829	G-type lectin S-receptor-	no	no	0.904	0.863	0.345	1e-107
Q8RWZ5	821	G-type lectin S-receptor-	no	no	0.926	0.894	0.322	7e-91
P17801	817	Putative receptor protein	N/A	no	0.909	0.881	0.336	3e-89
Q39203	797	G-type lectin S-receptor-	no	no	0.861	0.855	0.323	6e-84
O64477	828	G-type lectin S-receptor-	no	no	0.877	0.839	0.315	5e-81
O81906	849	G-type lectin S-receptor-	no	no	0.926	0.864	0.288	7e-72
O64783	814	G-type lectin S-receptor-	no	no	0.920	0.895	0.286	6e-69
Q9SXB3	820	G-type lectin S-receptor-	no	no	0.917	0.886	0.293	2e-68

>sp|Q39202|RLK1_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana GN=RLK1 PE=2 SV=2

 Score =  693 bits (1788), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/824 (46%), Positives = 509/824 (61%), Gaps = 62/824 (7%)

Query: 3   FHLLSLLFLLLLPCLTAAQSNGTISIGQQLTAAESTE---PWLSPSKDFALGFHQLDSKD 59
            HL+ +L L      +    NG++ +G+ LTA+ES +    W SPS DFA GF ++   D
Sbjct: 9   IHLVLILQLQTFFVFSQNIRNGSVPVGESLTASESQQISSSWRSPSGDFAFGFRKIQPND 68

Query: 60  LFLPAIWYYKIPSKTIVWYASAVNPA----PRGSKLRLTANRGLVLEDPEGREIWKSEIS 115
            F  +IW+ KI  KTIVW+A AVN      P GSK+ LTA+ GLV+ DP G+E+W++ +S
Sbjct: 69  GFTLSIWFDKISDKTIVWHAQAVNTTTGLVPNGSKVTLTADGGLVIADPRGQELWRA-LS 127

Query: 116 TGQAAFGVLYDTGNFLIVNTNSER----LWQSFDHPTDTLLPTQTMERGGVVSSRRKDTY 171
            G  + G   D GNF++    SE     LW SF++PTDTLLP Q +E G  +SSRR +T 
Sbjct: 128 GGSVSRGRFTDDGNFVLFRDGSEDSDEVLWSSFENPTDTLLPNQNIEVGRNLSSRRTETS 187

Query: 172 FSRGRFQFRLLEDGNAVLNTINLESGFA---YDAYFWSNTFDTNRSNAGYRVVFNESGQL 228
           F +GRF  RL +DGN  L+++N E+      Y  Y+ SNT D N  N G ++VFN+SG++
Sbjct: 188 FKKGRFSLRLEDDGNLQLHSLNAETASESDIYSQYYESNTNDPN--NPGIQLVFNQSGEI 245

Query: 229 YVLRENKQRASLV---PETVSAKENYLRATLNFDGVFIFYSHPKNNS--TGDAIWSVSDV 283
           YVL+ N  R  +    P+   A   Y+       G  +    PK      G  +  +   
Sbjct: 246 YVLQRNNSRFVVKDRDPDFSIAAPFYIST-----GFLLSTIIPKEARRIVGGCLLGLCR- 299

Query: 284 LPENICINNDIRKGLGSGICGFNSICSISGAKRPICQCPKGFSLLDPDDAYGSCKPDF-I 342
             +N+C  +D    LG+  CG+N+ICS+   KRP C+CP+ F L DP + YG C PDF +
Sbjct: 300 --DNMCSPDD---ALGNMACGYNNICSLGNNKRPKCECPERFVLKDPSNEYGDCLPDFEM 354

Query: 343 LGCEEDGKKSGED--LYYIEELRNTDWPTSDYEQISPYGKDECVSSCLKDCQCSAAVL-- 398
             C  + + +  D  LY    L  T+WP  DYE  + Y ++ C +SCL DC C+A +   
Sbjct: 355 QTCRPENQTANSDVNLYEFITLEKTNWPFGDYESYANYDEERCKASCLSDCLCAAVIFGT 414

Query: 399 -RDDTCWKKKLPLSYGKTDRDETGTTFIKIRK-----VPSGGK--KKVDVLIPVVSVLFG 450
            RD  CWKKK PLS+G+        TFIK+R      VP  G   KK+D LI   SVL G
Sbjct: 415 NRDLKCWKKKFPLSHGERSPRGDSDTFIKVRNRSIADVPVTGNRAKKLDWLIIACSVLLG 474

Query: 451 SSALINLLLVSACCLGFLVVNRKKFMRPHQEDQG-------VSYMNLRCFTYKELVEVTR 503
           +SA +   +    C        K  M+    D G        + +NLR FTY EL E TR
Sbjct: 475 TSAFV---IFDTSCSYRKTKKSKNMMKNQARDIGRTTATTTANELNLRVFTYGELAEATR 531

Query: 504 GFKEELGRGAFGTVYKGFVNM--GSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
            F EELGRGAFG VYKG++ +  GS   VAVKKL+ +  D+EKEFK EV  IGQ HHKNL
Sbjct: 532 DFTEELGRGAFGIVYKGYLEVAGGSEVTVAVKKLDRLDLDNEKEFKNEVKVIGQIHHKNL 591

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           VRL+G+C+EGQ++++VYEF+  GT+A+FLF   +P+W+ R  IA+ IA G+ YLHEEC  
Sbjct: 592 VRLIGFCNEGQSQMIVYEFLPQGTLANFLFRRPRPSWEDRKNIAVAIARGILYLHEECSE 651

Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT 681
           QIIHCDIKPQNILLD++Y  RISDFGLAKLL ++Q++T T IRGTKGYVAPEWFRN PIT
Sbjct: 652 QIIHCDIKPQNILLDEYYTPRISDFGLAKLLLMNQTYTLTNIRGTKGYVAPEWFRNSPIT 711

Query: 682 VKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN 741
            KVDVYSYGV+LLEI+C ++ +D E    D  IL +WAYD +++  LE L E+D EAMN+
Sbjct: 712 SKVDVYSYGVMLLEIVCCKKAVDLE----DNVILINWAYDCFRQGRLEDLTEDDSEAMND 767

Query: 742 VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPIPPCP 785
           +  + R+V +A WCIQE+   RP MR VTQMLEGV++V  PP P
Sbjct: 768 METVERYVKIAIWCIQEEHGMRPNMRNVTQMLEGVIQVFDPPNP 811

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9FLV4|Y5248_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 OS=Arabidopsis thaliana GN=At5g24080 PE=2 SV=1

 Score =  397 bits (1021), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 280/836 (33%), Positives = 426/836 (50%), Gaps = 87/836 (10%)

Query: 9   LFLLLLPCLTAAQSNGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYY 68
           LF      L +  +   I +G +L A+E    W+S +  FA+GF +    D FL +IW+ 
Sbjct: 13  LFSFFCFFLVSLATEPHIGLGSKLKASEPNRAWVSANGTFAIGFTRFKPTDRFLLSIWFA 72

Query: 69  KIPSK-TIVWYASAVNPAPRGSKLRLTANRGLVLEDPEGREIWKSEISTGQAAFGVLYDT 127
           ++P   TIVW  +  +P  + + L L A   LVL D +   +W S  S       V+ ++
Sbjct: 73  QLPGDPTIVWSPNRNSPVTKEAVLELEATGNLVLSD-QNTVVWTSNTSNHGVESAVMSES 131

Query: 128 GNFLIVNTN---SERLWQSFDHPTDTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLLED 184
           GNFL++ T       +WQSF  P+DTLLP Q +     ++S    +    G +  ++L+ 
Sbjct: 132 GNFLLLGTEVTAGPTIWQSFSQPSDTLLPNQPLTVSLELTSNPSPS--RHGHYSLKMLQQ 189

Query: 185 GNAV----LNTINLESGFAYDAYFWSNTFDTNRS---------NAGYRVVFNES--GQLY 229
             ++       INL+    Y   +WS    +N +            +++V+ ES  G +Y
Sbjct: 190 HTSLSLGLTYNINLDPHANYS--YWSGPDISNVTGDVTAVLDDTGSFKIVYGESSIGAVY 247

Query: 230 VLR----ENKQRASLVPETVSAKENYLRATLNFDGVFIFYSHPKNNSTGDAIWSVSDVLP 285
           V +    +N+   +     ++      R  L  +G    Y    N+  G + W     +P
Sbjct: 248 VYKNPVDDNRNYNNSSNLGLTKNPVLRRLVLENNGNLRLYRW-DNDMNGSSQW-----VP 301

Query: 286 ENICINN--DIRKGLGSGICGFNSICSISGAKRPI-CQC-PKGFSLLDPDDA-YGSCKPD 340
           E   ++N  DI     +GICG N +C++   K+   C C P    L D ++A   S    
Sbjct: 302 EWAAVSNPCDI-----AGICG-NGVCNLDRTKKNADCLCLPGSVKLPDQENAKLCSDNSS 355

Query: 341 FILGCEEDGKKSGEDLYYIEELRNTDWPTSD---YEQISPYGK-DECVSSCLKDCQCSAA 396
            +  CE +  ++G   + I  ++ T++  S+    E IS      +C   CL DC+C A+
Sbjct: 356 LVQECESNINRNGS--FKISTVQETNYYFSERSVIENISDISNVRKCGEMCLSDCKCVAS 413

Query: 397 V--LRDDT--CWKKKLPLSYGKTDRDETGTTFIKIRKV---------------PSGGKKK 437
           V  L D+   CW  K  L++G   RD   T F+K R                  S G ++
Sbjct: 414 VYGLDDEKPYCWILK-SLNFGGF-RDPGSTLFVKTRANESYPSNSNNNDSKSRKSHGLRQ 471

Query: 438 VDVLIPVVSVLFGSSALINLLLVSACCLGFLVVNRKKFMRPHQEDQGVSYMNLRCFTYKE 497
             ++IP+V  +    AL+ +LL       +  ++RK+ ++   ++  +   +   FTY++
Sbjct: 472 KVLVIPIVVGMLVLVALLGMLL-------YYNLDRKRTLKRAAKNSLILCDSPVSFTYRD 524

Query: 498 LVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH 557
           L   T  F + LG G FGTVYKG V       VAVK+L+      E+EF  EVN IG  H
Sbjct: 525 LQNCTNNFSQLLGSGGFGTVYKGTV--AGETLVAVKRLDRALSHGEREFITEVNTIGSMH 582

Query: 558 HKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP----NWKLRTEIAMGIAGGLF 613
           H NLVRL GYC E  +RLLVYE+M NG++  ++F   +     +W+ R EIA+  A G+ 
Sbjct: 583 HMNLVRLCGYCSEDSHRLLVYEYMINGSLDKWIFSSEQTANLLDWRTRFEIAVATAQGIA 642

Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE 673
           Y HE+C  +IIHCDIKP+NILLDD++  ++SDFGLAK++  + SH  T IRGT+GY+APE
Sbjct: 643 YFHEQCRNRIIHCDIKPENILLDDNFCPKVSDFGLAKMMGREHSHVVTMIRGTRGYLAPE 702

Query: 674 WFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVE 733
           W  N PITVK DVYSYG+LLLEI+  RRN+D      D      WAY      T    V+
Sbjct: 703 WVSNRPITVKADVYSYGMLLLEIVGGRRNLDMSYDAED-FFYPGWAYKELTNGTSLKAVD 761

Query: 734 NDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV-EVPIPPCPWTL 788
             L+ +     + + + VAFWCIQ++ S RP+M +V ++LEG   E+ +PP P T+
Sbjct: 762 KRLQGVAEEEEVVKALKVAFWCIQDEVSMRPSMGEVVKLLEGTSDEINLPPMPQTI 817

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9XID3|Y1343_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 OS=Arabidopsis thaliana GN=At1g34300 PE=1 SV=1

 Score =  388 bits (997), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 277/802 (34%), Positives = 409/802 (50%), Gaps = 86/802 (10%)

Query: 25  TISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYY-KIPSKTIVWYASAVN 83
           TI +G  + A+ S + W SP+  F++ F    S + FL A+ +   +P    +W A  V+
Sbjct: 26  TIPLGSVIYASGSNQNWPSPNSTFSVSFVPSPSPNSFLAAVSFAGSVP----IWSAGTVD 81

Query: 84  PAPRGSKLRLTANRGLVLEDPEGREIWKSEISTGQAAFGVLYDTGNFLIVNTNSERLWQS 143
              RGS LRL  +  L L +  G  +W S+        G + DTG F+++N  S  +W S
Sbjct: 82  S--RGS-LRLHTSGSLRLTNGSGTTVWDSKTDRLGVTSGSIEDTGEFILLNNRSVPVWSS 138

Query: 144 FDHPTDTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAY 203
           FD+PTDT++ +Q    G ++ S         G + F+L   GN  L        +   A 
Sbjct: 139 FDNPTDTIVQSQNFTAGKILRS---------GLYSFQLERSGNLTLR-------WNTSAI 182

Query: 204 FWSNTFDTNRSNAGY--RVVFNESGQLYVLRENK-QRASLVPETVSAKENYLR-ATLNFD 259
           +W++  +++ S+     R+    +G + +   N    A +V        N  R   L+ D
Sbjct: 183 YWNHGLNSSFSSNLSSPRLSLQTNGVVSIFESNLLGGAEIVYSGDYGDSNTFRFLKLDDD 242

Query: 260 G-VFIFYSHPKNNSTGDAIWSVSDVLPENICINNDIRKGLGSGICGFNSICSISGAKRPI 318
           G + I+ S  +N+   +A WS  D             + L  G CG   ICS +    PI
Sbjct: 243 GNLRIYSSASRNSGPVNAHWSAVD-------------QCLVYGYCGNFGICSYNDTN-PI 288

Query: 319 CQCP-KGFSLLDPDDAYGSCKPDFILGCEEDGKKSGEDLYYIEELRNTDWPTSDYEQISP 377
           C CP + F  +D +D    CK    L  +  G  +  DL +       D P S+      
Sbjct: 289 CSCPSRNFDFVDVNDRRKGCKRKVELS-DCSGNTTMLDLVHTRLFTYEDDPNSESFFA-- 345

Query: 378 YGKDECVSSCLKDCQCSAAVLRDD---TCWKKKLPLSY--GKTDRDETGTTFIKI----- 427
            G   C ++CL    C A+V   D    CW+K  P S+  G        T+++K+     
Sbjct: 346 -GSSPCRANCLSSVLCLASVSMSDGSGNCWQKH-PGSFFTGYQWPSVPSTSYVKVCGPVV 403

Query: 428 ----RKVPSG--GKKKVDVLIPVVSVLFGSSALI--NLLLVSACCLG---FLVVNRKKFM 476
                +   G     KV + I  V+V+ G   L+   + L   CC     F  ++    +
Sbjct: 404 ANTLERATKGDDNNSKVHLWIVAVAVIAGLLGLVAVEIGLWWCCCRKNPRFGTLSSHYTL 463

Query: 477 RPHQEDQGVSYMNLRCFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN 536
             +     V       FTYKEL   T+ FKE+LG G FGTVY+G +   +   VAVK+L 
Sbjct: 464 LEYASGAPVQ------FTYKELQRCTKSFKEKLGAGGFGTVYRGVLT--NRTVVAVKQLE 515

Query: 537 SVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP 596
            + Q  EK+F+ EV  I  THH NLVRL+G+C +G++RLLVYEFM NG++ +FLF     
Sbjct: 516 GIEQ-GEKQFRMEVATISSTHHLNLVRLIGFCSQGRHRLLVYEFMRNGSLDNFLFTTDSA 574

Query: 597 ---NWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT 653
               W+ R  IA+G A G+ YLHEEC   I+HCDIKP+NIL+DD++ A++SDFGLAKLL 
Sbjct: 575 KFLTWEYRFNIALGTAKGITYLHEECRDCIVHCDIKPENILVDDNFAAKVSDFGLAKLLN 634

Query: 654 -LDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDK 712
             D  +  +++RGT+GY+APEW  N+PIT K DVYSYG++LLE++  +RN D    K + 
Sbjct: 635 PKDNRYNMSSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLELVSGKRNFDVS-EKTNH 693

Query: 713 AILTDWAYDRYQERTLEALVENDLEAMNNVTM--LHRFVMVAFWCIQEDPSHRPTMRKVT 770
              + WAY+ +++   +A+++  L     V M  + R V  +FWCIQE P  RPTM KV 
Sbjct: 694 KKFSIWAYEEFEKGNTKAILDTRLSEDQTVDMEQVMRMVKTSFWCIQEQPLQRPTMGKVV 753

Query: 771 QMLEGVVEVPIPPCPWTLNITS 792
           QMLEG+ E+  P CP T++  S
Sbjct: 754 QMLEGITEIKNPLCPKTISEVS 775

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8RWZ5|SD25_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana GN=SD25 PE=1 SV=1

 Score =  335 bits (860), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 265/822 (32%), Positives = 408/822 (49%), Gaps = 88/822 (10%)

Query: 5   LLSLLFLLLLPCLTAAQSNGTISIG---QQLTAAESTEPWL-SPSKDFALGF-HQLDSKD 59
           +++ L  L  P      S G+I+ G    Q+    +   +L S +  F  GF    DS  
Sbjct: 8   IVTCLVFLPDPLRAGVASIGSITPGFGGSQMNYINNDGIFLESNNSAFGFGFVTTQDSVT 67

Query: 60  LFLPAIWYYKIPSKTIVWYASAVNPAPRGSKLRLTANRGLVLEDPEGREIWKSEISTGQA 119
           LF  +I +    S  ++W A+  +P     K     N  +V+E   G E+W+ + S   A
Sbjct: 68  LFTLSIIHKS--STKLIWSANRASPVSNSDKFVFDDNGNVVME---GTEVWRLDNSGKNA 122

Query: 120 AFGVLYDTGNFLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSSRRKDTYFSRGRFQF 179
           +   L D+GN ++V+ +   +W+SFDHPTDTL+  Q  + G  ++S       S     +
Sbjct: 123 SRIELRDSGNLVVVSVDGTSIWESFDHPTDTLITNQAFKEGMKLTSSP-----SSSNMTY 177

Query: 180 RL-LEDGNAVLNTINLESGFAYDAYFWSNTFDTNRSNAGYRVVFNESGQLY-------VL 231
            L ++ G+ VL+  +L         +WS       +NA  R++  + G +          
Sbjct: 178 ALEIKSGDMVLSVNSLTP-----QVYWS------MANARERIINKDGGVVTSSSLLGNSW 226

Query: 232 RENKQRASLVPETVSA--KENYLR--ATLNFDGVFIFYSHPKNNSTGDAIWSVSDVLPEN 287
           R   Q+  L+ + V +  K++     A L  +GV  F +     S  D+    S  +P +
Sbjct: 227 RFFDQKQVLLWQFVFSDNKDDNTTWIAVLGNNGVISFSNLGSGASAADS----STKIPSD 282

Query: 288 ICINNDIRKGLGSGICGFNSICSISGAKRPICQCPKGFSLLDPDDAYGSCKPDFILGCEE 347
           +C   +         CG   +C  SG+K  +C C  G S    D     CK      C++
Sbjct: 283 LCGTPE--------PCGPYYVC--SGSK--VCGCVSGLSRARSD-----CKTGITSPCKK 325

Query: 348 DGKKSGEDLYYIEELRNTDWPTSDYEQISPYGK----DECVSSCLKDCQCSAAVLRDDT- 402
               +   L  +      D+    Y    P+ K    D C   C  +C C     ++ + 
Sbjct: 326 TKDNATLPLQLVSAGDGVDYFALGYAP--PFSKKTDLDSCKEFCHNNCSCLGLFFQNSSG 383

Query: 403 -CWKKKLPLSYGKTDRDETG-TTFIKIRKVPSGGKKKVDVLIPVVSVLFGSSALINLLLV 460
            C+      S+  +    +G  ++IKI    SGG    +        +     +   ++ 
Sbjct: 384 NCFLFDYIGSFKTSGNGGSGFVSYIKIASTGSGGGDNGEDDGKHFPYVVIIVVVTVFIIA 443

Query: 461 SACCLGFLVVNRKKFM-----RPHQED---QGVSYMNLRCFTYKELVEVTRGFKEELGRG 512
               + F +  RKK +        +ED   + +S M +R F YK+L   T  F  +LG+G
Sbjct: 444 VLIFVAFRIHKRKKMILEAPQESSEEDNFLENLSGMPIR-FAYKDLQSATNNFSVKLGQG 502

Query: 513 AFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQ 572
            FG+VY+G +  GS   +AVKKL  + Q  +KEF+AEV+ IG  HH +LVRL G+C EG 
Sbjct: 503 GFGSVYEGTLPDGS--RLAVKKLEGIGQ-GKKEFRAEVSIIGSIHHLHLVRLRGFCAEGA 559

Query: 573 NRLLVYEFMSNGTVASFLF----GDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDI 628
           +RLL YEF+S G++  ++F    GD   +W  R  IA+G A GL YLHE+C  +I+HCDI
Sbjct: 560 HRLLAYEFLSKGSLERWIFRKKDGDVLLDWDTRFNIALGTAKGLAYLHEDCDARIVHCDI 619

Query: 629 KPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYS 688
           KP+NILLDD++NA++SDFGLAKL+T +QSH  T +RGT+GY+APEW  N  I+ K DVYS
Sbjct: 620 KPENILLDDNFNAKVSDFGLAKLMTREQSHVFTTMRGTRGYLAPEWITNYAISEKSDVYS 679

Query: 689 YGVLLLEIICLRRNID-NEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV-TMLH 746
           YG++LLE+I  R+N D +E S  +K     +A+ + +E  L  +V+  ++ ++     + 
Sbjct: 680 YGMVLLELIGGRKNYDPSETS--EKCHFPSFAFKKMEEGKLMDIVDGKMKNVDVTDERVQ 737

Query: 747 RFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPIPPCPWTL 788
           R +  A WCIQED   RP+M KV QMLEGV  V  PP   T+
Sbjct: 738 RAMKTALWCIQEDMQTRPSMSKVVQMLEGVFPVVQPPSSSTM 779

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P17801|KPRO_MAIZE Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2

 Score =  330 bits (846), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 283/841 (33%), Positives = 409/841 (48%), Gaps = 121/841 (14%)

Query: 9   LFLLLLPCLTAAQSNGTISIGQQLTAAESTEPWLSPSKD--FALGFHQLDSKDLFLPAIW 66
            F+ L P   AA S   + +G  L   ES E     S D  F+ GF+++ +   F  ++W
Sbjct: 17  FFIALFP--RAASSRDILPLGSSL-VVESYESSTLQSSDGTFSSGFYEVYTH-AFTFSVW 72

Query: 67  YYKIPS-----KTIVWYASAVNPA-PRGSKLRLTANRGLVLEDPEGREIWKSEISTGQAA 120
           Y K  +     KTIVW A+   P   R S L L  +  +VL D +G  +W+++   G   
Sbjct: 73  YSKTEAAAANNKTIVWSANPDRPVHARRSALTLQKDGNMVLTDYDGAAVWRAD---GNNF 129

Query: 121 FGV----LYDTGNFLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSSRRKDTYFSR-- 174
            GV    L DTGN +I ++    +WQSFD PTDT LPTQ +      ++R   T  SR  
Sbjct: 130 TGVQRARLLDTGNLVIEDSGGNTVWQSFDSPTDTFLPTQLI----TAATRLVPTTQSRSP 185

Query: 175 GRFQFRLLEDGNAVLNTINLESGFAYDAYFWSNTFDTNRSNAGYRVVFNESGQLYVLREN 234
           G + FR  +   +VL+ I      + D Y W +  D N    G R  +N S +L +L ++
Sbjct: 186 GNYIFRFSD--LSVLSLIYHVPQVS-DIY-WPDP-DQNLYQDG-RNQYN-STRLGMLTDS 238

Query: 235 KQRAS--------LVPETVSAKENYLRATLNFDGVFIFYSHPKNNSTGDAIWSVSDVLPE 286
              AS        LV   V       R TL+ DG    YS   N+S G   WSVS V   
Sbjct: 239 GVLASSDFADGQALVASDVGPGVKR-RLTLDPDGNLRLYS--MNDSDGS--WSVSMVAMT 293

Query: 287 NICINNDIRKGLGSGICGFNSICSISGAKRPICQCPKGFSLLDPDDAYGSCKPDFILGCE 346
             C   +I      G+CG N IC  S    P C CP G++  +P +    C       C+
Sbjct: 294 QPC---NIH-----GLCGPNGICHYS--PTPTCSCPPGYATRNPGNWTEGCMAIVNTTCD 343

Query: 347 EDGKKSGEDLYYIEELRNTDWPTSDYEQISPYGKDECVSSCLKDCQCSAAVLRDDT--CW 404
              K+S   + ++  L NTD+  SD + +       C   C+ DC C     ++ T  C+
Sbjct: 344 RYDKRS---MRFVR-LPNTDFWGSDQQHLLSVSLRTCRDICISDCTCKGFQYQEGTGSCY 399

Query: 405 KKKLPLSYGKTDRDETGTTFIKIRKVPSGGKKKVDVLIPVVSVL---------------- 448
            K    S       +  T ++K+   P+G     + LIP   V                 
Sbjct: 400 PKAYLFSGRTYPTSDVRTIYLKL---PTGVSVS-NALIPRSDVFDSVPRRLDCDRMNKSI 455

Query: 449 --------------------FGSSALINLLLVSACCLGFLVVNRKKFMRPHQ---EDQGV 485
                               +G  A   ++ VS     +  V +++ +RP +    ++G 
Sbjct: 456 REPFPDVHKTGGGESKWFYFYGFIAAFFVVEVSFISFAWFFVLKRE-LRPSELWASEKGY 514

Query: 486 SYM--NLRCFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE 543
             M  N R ++Y+ELV+ TR FK ELGRG  GTVYKG +      HVAVKKL +V Q  E
Sbjct: 515 KAMTSNFRRYSYRELVKATRKFKVELGRGESGTVYKGVLE--DDRHVAVKKLENVRQGKE 572

Query: 544 KEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLF---GDSKPNWKL 600
             F+AE++ IG+ +H NLVR+ G+C EG +RLLV E++ NG++A+ LF   G+   +W+ 
Sbjct: 573 V-FQAELSVIGRINHMNLVRIWGFCSEGSHRLLVSEYVENGSLANILFSEGGNILLDWEG 631

Query: 601 RTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN 660
           R  IA+G+A GL YLH EC   +IHCD+KP+NILLD  +  +I+DFGL KLL    S  N
Sbjct: 632 RFNIALGVAKGLAYLHHECLEWVIHCDVKPENILLDQAFEPKITDFGLVKLLNRGGSTQN 691

Query: 661 TA-IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRR------NIDNEISKVDKA 713
            + +RGT GY+APEW  ++PIT KVDVYSYGV+LLE++   R        D   S + K 
Sbjct: 692 VSHVRGTLGYIAPEWVSSLPITAKVDVYSYGVVLLELLTGTRVSELVGGTDEVHSMLRKL 751

Query: 714 ILTDWAYDRYQERT-LEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM 772
           +    A    +E++ ++  +++ L    N       + +A  C++ED S RPTM    Q 
Sbjct: 752 VRMLSAKLEGEEQSWIDGYLDSKLNRPVNYVQARTLIKLAVSCLEEDRSKRPTMEHAVQT 811

Query: 773 L 773
           L
Sbjct: 812 L 812

Probable receptor. Interaction with a ligand in the extracellular domain triggers the protein kinase activity of the cytoplasmic domain.

Zea mays (taxid: 4577)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q39203|SD22_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2 OS=Arabidopsis thaliana GN=SD22 PE=1 SV=1

 Score =  312 bits (800), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 242/747 (32%), Positives = 359/747 (48%), Gaps = 65/747 (8%)

Query: 48  FALGFHQL--DSKDLFLPAIWYYKIPSKTIVWYASAVNPA--PRGSKLRLTANRGLVLED 103
           F LGF      S + +L  I Y  +P+ T VW A+ + P   P  S L LT+   L++ +
Sbjct: 40  FRLGFFSTTNGSSNWYL-GISYASMPTPTHVWVANRIRPVSDPDSSTLELTSTGYLIVSN 98

Query: 104 PEGREIWKSEISTGQAAFGVLYDTGNFLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVV 163
                +W+++       F    +TGN +++N +   +WQSFD+PTDT LP   +     +
Sbjct: 99  LRDGVVWQTDNKQPGTDF-RFSETGNLILINDDGSPVWQSFDNPTDTWLPGMNVTGLTAM 157

Query: 164 SSRRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWSNTFDTNRSNAGY-RVVF 222
           +S R     S G +  RL    N        +  +     +WS    T  +  G   +  
Sbjct: 158 TSWRSLFDPSPGFYSLRLSPSFN------EFQLVYKGTTPYWSTGNWTGEAFVGVPEMTI 211

Query: 223 NESGQLYVLRENKQRAS---LVPETVSAKENYL-RATLNFDGVFIFYSHPKNNSTGDAIW 278
               + + +      AS   +VP   S  E  L R  +  +G    Y+      + +  W
Sbjct: 212 PYIYRFHFVNPYTPTASFWYIVPPLDSVSEPRLTRFMVGANGQLKQYTWDPQTQSWNMFW 271

Query: 279 SVSDVLPENIC-INNDIRKGLGSGICGFNSICSISGAKRPICQCPKGFSLLDPDDAYGSC 337
               + PE+ C + N         +CG    CS S   +P C C +GF   + D A+ S 
Sbjct: 272 ----LQPEDPCRVYN---------LCGQLGFCS-SELLKP-CACIRGFRPRN-DAAWRS- 314

Query: 338 KPDFILGCEEDGKKSGEDLYYIEELRNTDWPTSDYEQISPYGKDECVSSCLKDCQCSAAV 397
             D+  GC  +   SGE     E + +  +            K  C  +CL +  C    
Sbjct: 315 -DDYSDGCRRENGDSGEKSDTFEAVGDLRYDGDVKMSRLQVSKSSCAKTCLGNSSCVGFY 373

Query: 398 LRDDTCWKKKLPLSYGKTDRDETGTTFIKIRKVPSGGKKKVDVLIPVVSVLFGSSALINL 457
            ++ +   K L L      ++  G              K + +L  VV    GS +++  
Sbjct: 374 HKEKSNLCKIL-LESPNNLKNSKGNI-----------SKSIIILCSVV----GSISVLGF 417

Query: 458 LLVSACCLGFLVVNRKKFMRPHQEDQGVSYMNLRCFTYKELVEVTRGFKEELGRGAFGTV 517
            L+    L  L  +RK+     Q++ G + +NL+ F++KEL   T GF +++G G FG V
Sbjct: 418 TLLVPLIL--LKRSRKRKKTRKQDEDGFAVLNLKVFSFKELQSATNGFSDKVGHGGFGAV 475

Query: 518 YKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLV 577
           +KG +  GSS  VAVK+L       E EF+AEV  IG   H NLVRL G+C E  +RLLV
Sbjct: 476 FKGTLP-GSSTFVAVKRLERP-GSGESEFRAEVCTIGNIQHVNLVRLRGFCSENLHRLLV 533

Query: 578 YEFMSNGTVASFLFGDSKP--NWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILL 635
           Y++M  G+++S+L   S    +W+ R  IA+G A G+ YLHE C   IIHCDIKP+NILL
Sbjct: 534 YDYMPQGSLSSYLSRTSPKLLSWETRFRIALGTAKGIAYLHEGCRDCIIHCDIKPENILL 593

Query: 636 DDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLE 695
           D  YNA++SDFGLAKLL  D S     +RGT GYVAPEW   +PIT K DVYS+G+ LLE
Sbjct: 594 DSDYNAKVSDFGLAKLLGRDFSRVLATMRGTWGYVAPEWISGLPITTKADVYSFGMTLLE 653

Query: 696 IICLRRNI-------DNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRF 748
           +I  RRN+         + ++ +K     WA     +  ++++V++ L    N   + R 
Sbjct: 654 LIGGRRNVIVNSDTLGEKETEPEKWFFPPWAAREIIQGNVDSVVDSRLNGEYNTEEVTRM 713

Query: 749 VMVAFWCIQEDPSHRPTMRKVTQMLEG 775
             VA WCIQ++   RP M  V +MLEG
Sbjct: 714 ATVAIWCIQDNEEIRPAMGTVVKMLEG 740

Serine/threonine-protein kinase.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O64477|Y2913_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 OS=Arabidopsis thaliana GN=At2g19130 PE=2 SV=1

 Score =  303 bits (775), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 249/789 (31%), Positives = 379/789 (48%), Gaps = 94/789 (11%)

Query: 42  LSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAVNP-APRGSKLRLTANRGLV 100
           +S    + +GF +  S   F   +WY ++ S+TI+W A+     + + S +   +N  L+
Sbjct: 39  VSSDGTYEMGFFKPGSSSNFYIGMWYKQL-SQTILWVANRDKAVSDKNSSVFKISNGNLI 97

Query: 101 LEDPEGRE-IWKSEI---STGQAAFGVLYDTGNFLIVNTNSER----LWQSFDHPTDTLL 152
           L D   +  +W + +   S+  A   VL D GN ++    S      LWQSFDHP DT L
Sbjct: 98  LLDGNYQTPVWSTGLNSTSSVSALEAVLQDDGNLVLRTGGSSLSANVLWQSFDHPGDTWL 157

Query: 153 PTQTMERGGVVSSRRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAY------FWS 206
           P       GV     K T  S+    ++ LED +  L ++ L+   AY         +WS
Sbjct: 158 P-------GVKIRLDKRTGKSQRLTSWKSLEDPSPGLFSLELDESTAYKILWNGSNEYWS 210

Query: 207 N--------TFDT---NRSNAGYRVVFNESGQLYVLRENKQRASLVPETVSAKENYLRAT 255
           +         FD+    R N  Y   F           +    S    ++  + N  R  
Sbjct: 211 SGPWNPQSRIFDSVPEMRLNYIYNFSFF----------SNTTDSYFTYSIYNQLNVSRFV 260

Query: 256 LNFDGVFIFYSHPKNNSTGDAIWSVSDVLPENICINNDIRKGLGS-GICGFNSICSISGA 314
           ++  G    ++  + N   +  WS     P   C    + +  GS GIC        S  
Sbjct: 261 MDVSGQIKQFTWLEGNKAWNLFWS----QPRQQC---QVYRYCGSFGIC--------SDK 305

Query: 315 KRPICQCPKGFSLLDPDDAYGSCKPDFILGC--EEDGKKSGEDLYYIEELRNTDWPTSDY 372
             P C+CP+GF  +   D       D+  GC  + + + S  D+     L N      + 
Sbjct: 306 SEPFCRCPQGFRPMSQKDWD---LKDYSAGCVRKTELQCSRGDINQFFRLPNMKL-ADNS 361

Query: 373 EQISPYGKDECVSSCLKDCQCSAAVLRDDT----CWKKKLPLSYGKTDRDETGTTF---I 425
           E ++      C S+C  DC C A    + +     W K +       D +  G  F   +
Sbjct: 362 EVLTRTSLSICASACQGDCSCKAYAYDEGSSKCLVWSKDVLNLQQLEDENSEGNIFYLRL 421

Query: 426 KIRKVPS-GGKKKVDVLIPVVSVLFGSSALINLLLVSACCLGFLVVNRKKFMRPHQEDQG 484
               VP+ G   K +    +   + GS   + ++++    +  ++  R++     ++  G
Sbjct: 422 AASDVPNVGASGKSNNKGLIFGAVLGS---LGVIVLVLLVVILILRYRRRKRMRGEKGDG 478

Query: 485 VSYMNLRCFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEK 544
                L  F+Y+EL   T+ F ++LG G FG+V+KG   +  S+ +AVK+L  + Q  EK
Sbjct: 479 T----LSAFSYRELQNATKNFSDKLGGGGFGSVFKG--ALPDSSDIAVKRLEGISQ-GEK 531

Query: 545 EFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP-----NWK 599
           +F+ EV  IG   H NLVRL G+C EG  +LLVY++M NG++ S LF +         WK
Sbjct: 532 QFRTEVVTIGTIQHVNLVRLRGFCSEGSKKLLVYDYMPNGSLDSHLFLNQVEEKIVLGWK 591

Query: 600 LRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT 659
           LR +IA+G A GL YLH+EC   IIHCDIKP+NILLD  +  +++DFGLAKL+  D S  
Sbjct: 592 LRFQIALGTARGLAYLHDECRDCIIHCDIKPENILLDSQFCPKVADFGLAKLVGRDFSRV 651

Query: 660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNID-NEISKVDKAILTDW 718
            T +RGT+GY+APEW   + IT K DVYSYG++L E++  RRN + +E  KV       W
Sbjct: 652 LTTMRGTRGYLAPEWISGVAITAKADVYSYGMMLFELVSGRRNTEQSENEKV--RFFPSW 709

Query: 719 AYD-RYQERTLEALVENDLEA-MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV 776
           A     ++  + +LV+  LE    ++  + R   VA WCIQ++ SHRP M +V Q+LEGV
Sbjct: 710 AATILTKDGDIRSLVDPRLEGDAVDIEEVTRACKVACWCIQDEESHRPAMSQVVQILEGV 769

Query: 777 VEVPIPPCP 785
           +EV  PP P
Sbjct: 770 LEVNPPPFP 778

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O81906|B120_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana GN=B120 PE=1 SV=1

 Score =  272 bits (696), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 240/832 (28%), Positives = 373/832 (44%), Gaps = 98/832 (11%)

Query: 2   AFHLLSLLFLLLLPCLTAAQSNGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLF 61
           + +L   L+  L     AA    TI  G+ L    + +P +SP K F LGF    S    
Sbjct: 8   SLYLSLFLYFFLYESSMAAN---TIRRGESLRDGINHKPLVSPQKTFELGFFSPGSSTHR 64

Query: 62  LPAIWYYKIPSKTIVWYASAVNPAPRGSKLRLTANRG-LVLEDPEGREIWKSEISTGQA- 119
              IWY  I  K +VW A+   P    S + + +N G LVL D +   +W S I +    
Sbjct: 65  FLGIWYGNIEDKAVVWVANRATPISDQSGVLMISNDGNLVLLDGKNITVWSSNIESSTTN 124

Query: 120 ---AFGVLYDTGNFLIVNTNSER-LWQSFDHPTDTLLPT-------QTMERGGVVSSRRK 168
                  ++DTGNF++  T+++R +W+SF+HPTDT LP        QT +    V S R 
Sbjct: 125 NNNRVVSIHDTGNFVLSETDTDRPIWESFNHPTDTFLPQMRVRVNPQTGDNHAFV-SWRS 183

Query: 169 DTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWSNTFDTNRSNA--------GYRV 220
           +T  S G +   +   G   +          + +  W++   T   N         G+++
Sbjct: 184 ETDPSPGNYSLGVDPSGAPEIVLWEGNKTRKWRSGQWNSAIFTGIPNMSLLTNYLYGFKL 243

Query: 221 VF--NESGQLYVLRENKQRASLVPETVSAKENYLRATLNFDGVFIFYSHPKNNSTGDAIW 278
               +E+G +Y         + VP   S     LR  + ++G        + N T    W
Sbjct: 244 SSPPDETGSVYF--------TYVPSDPSV---LLRFKVLYNGT---EEELRWNETLKK-W 288

Query: 279 SVSDVLPENICINNDIRKGLGSGICGFNSICSISGAKRPICQCPKGFSLLDPDDAYGSCK 338
           +     P++ C  +   +    GIC              IC C  G+  +   +    C+
Sbjct: 289 TKFQSEPDSEC--DQYNRCGKFGICDMK-------GSNGICSCIHGYEQVSVGNWSRGCR 339

Query: 339 PDFILGCEEDGKKSGEDLYYIEELRNTDWPTSDYEQISPYGKDECVSSCLKDCQCSAAVL 398
               L CE +     ++   ++ ++  D+   ++  + P   ++C   CL++C C+A  L
Sbjct: 340 RRTPLKCERNISVGEDEFLTLKSVKLPDFEIPEHNLVDP---EDCRERCLRNCSCNAYSL 396

Query: 399 RDD---TCWKKKLPLSYGKTDRDETGTTFIKIR----KVPSGGKKKVDVLIPVV--SVLF 449
                   W + L        + E G + + IR    +V    K K+ V++ V+   +L 
Sbjct: 397 VGGIGCMIWNQDLV----DLQQFEAGGSSLHIRLADSEVGENRKTKIAVIVAVLVGVILI 452

Query: 450 GSSALINLLL-----VSACCLG------FLVVNRKKFMRPHQ----------EDQGVSYM 488
           G  AL+         VS    G       +V +  K                E + V+  
Sbjct: 453 GIFALLLWRFKRKKDVSGAYCGKNTDTSVVVADLTKSKETTSAFSGSVDIMIEGKAVNTS 512

Query: 489 NLRCFTYKELVEVTRGF--KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEF 546
            L  F+   +   T  F  + ELGRG FG VYKG +  G    +AVK+L+        EF
Sbjct: 513 ELPVFSLNAIAIATNDFCKENELGRGGFGPVYKGVLEDG--REIAVKRLSGKSGQGVDEF 570

Query: 547 KAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP---NWKLRTE 603
           K E+  I +  H+NLVRLLG C EG+ ++LVYE+M N ++  FLF ++K    +WKLR  
Sbjct: 571 KNEIILIAKLQHRNLVRLLGCCFEGEEKMLVYEYMPNKSLDFFLFDETKQALIDWKLRFS 630

Query: 604 IAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA- 662
           I  GIA GL YLH +   +IIH D+K  N+LLD   N +ISDFG+A++   +Q+  NT  
Sbjct: 631 IIEGIARGLLYLHRDSRLRIIHRDLKVSNVLLDAEMNPKISDFGMARIFGGNQNEANTVR 690

Query: 663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDR 722
           + GT GY++PE+      +VK DVYS+GVLLLEI+  +RN    +   +   L  +A+  
Sbjct: 691 VVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIVSGKRN--TSLRSSEHGSLIGYAWYL 748

Query: 723 YQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
           Y     E LV+  +    +     R + VA  C+Q+  + RP M  V  MLE
Sbjct: 749 YTHGRSEELVDPKIRVTCSKREALRCIHVAMLCVQDSAAERPNMASVLLMLE 800

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O64783|Y1137_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 OS=Arabidopsis thaliana GN=At1g61370 PE=3 SV=2

 Score =  262 bits (670), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 236/824 (28%), Positives = 384/824 (46%), Gaps = 95/824 (11%)

Query: 7   SLLFLLLL--PCLTAAQSNGT-ISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLP 63
           SLLFLL++   C  AA +  + +SIGQ L+         SP+  + LGF   ++      
Sbjct: 11  SLLFLLIIFPSCAFAAITRASPLSIGQTLS---------SPNGTYELGFFSPNNSRNQYV 61

Query: 64  AIWYYKIPSKTIVWYASAVNPAPR-GSKLRLTANRGLVLEDPEGREIWK-SEISTGQAAF 121
            IW+  I  + +VW A+   P     + L + +N  L+L + E   +W   E  +     
Sbjct: 62  GIWFKNITPRVVVWVANRDKPVTNNAANLTINSNGSLILVEREQNVVWSIGETFSSNELR 121

Query: 122 GVLYDTGNFLIVNTNSER-LWQSFDHPTDTLLPTQTM------ERGGVVSSRRKDTYFSR 174
             L + GN ++++  SER LW+SF+H  DT+L   ++       +  V+SS +  T  S 
Sbjct: 122 AELLENGNLVLIDGVSERNLWESFEHLGDTMLLESSVMYDVPNNKKRVLSSWKNPTDPSP 181

Query: 175 GRFQFRLLEDGNAVLNTINLESGFAYDAY--FWSNTFDTNRSNAGYRVVFNESGQLYVLR 232
           G F         A L T     GF       +W       R     RV F    ++    
Sbjct: 182 GEFV--------AELTTQVPPQGFIMRGSRPYW-------RGGPWARVRFTGIPEMDGSH 226

Query: 233 ENKQRASLVPETVSAKENYLRATLNFDGVFIFYSHPKNNSTGDAIWS-----VSDV-LPE 286
            +K   S   + V+A    L  +L      + Y+   +  +   IW+     V+D+  P 
Sbjct: 227 VSKFDIS---QDVAAGTGSLTYSLERRNSNLSYTTLTSAGSLKIIWNNGSGWVTDLEAPV 283

Query: 287 NICINNDIRKGLGSGICGFNSICSISGAKRPICQCPKGFSLLDPDDAY------GSCKPD 340
           + C   D+        CG   +C  S    P C+C KGF +   D+ +      G C   
Sbjct: 284 SSC---DVYN-----TCGPFGLCIRSNP--PKCECLKGF-VPKSDEEWNKRNWTGGCMRR 332

Query: 341 FILGCEEDGKKSGE----DLYYIEELRNTDWPTSDYEQISPYGKDECVSSCLKDCQCSA- 395
             L C+ +   + +    D++ I  + N   P   YE +S   +++C   CL +C C+A 
Sbjct: 333 TNLSCDVNSSATAQANNGDIFDI--VANVK-PPDFYEYLSLINEEDCQQRCLGNCSCTAF 389

Query: 396 AVLRDDTC--WKKKLPLSYGKTDRDETGTTFIKIRKVPSGGKKKVDVLIP-VVSVLFGSS 452
           + +    C  W ++L          ET +  I++      G  +V +++  +VS+    S
Sbjct: 390 SYIEQIGCLVWNRELVDVMQFVAGGETLS--IRLASSELAGSNRVKIIVASIVSI----S 443

Query: 453 ALINLLLVSACCLGFLVVNRKKFMRPHQEDQGVSYMNLR-----CFTYKELVEVTRGFKE 507
             + L+  S     +          P +  Q      L+      F  + ++ +T  F  
Sbjct: 444 VFMILVFASYWYWRYKAKQNDSNPIPLETSQDAWREQLKPQDVNFFDMQTILTITNNFSM 503

Query: 508 E--LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           E  LG+G FG VYKG  N+     +A+K+L+S      +EF  E+  I +  H+NLVRLL
Sbjct: 504 ENKLGQGGFGPVYKG--NLQDGKEIAIKRLSSTSGQGLEEFMNEIILISKLQHRNLVRLL 561

Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKP---NWKLRTEIAMGIAGGLFYLHEECCTQ 622
           G C EG+ +LL+YEFM+N ++ +F+F  +K    +W  R EI  GIA GL YLH + C +
Sbjct: 562 GCCIEGEEKLLIYEFMANKSLNTFIFDSTKKLELDWPKRFEIIQGIACGLLYLHRDSCLR 621

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT-AIRGTKGYVAPEWFRNMPIT 681
           ++H D+K  NILLD+  N +ISDFGLA++    Q   NT  + GT GY++PE+      +
Sbjct: 622 VVHRDMKVSNILLDEEMNPKISDFGLARMFQGTQHQANTRRVVGTLGYMSPEYAWTGMFS 681

Query: 682 VKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN 741
            K D+Y++GVLLLEII  +R     I +  K +L ++A+D + E     L++ D+ +  +
Sbjct: 682 EKSDIYAFGVLLLEIITGKRISSFTIGEEGKTLL-EFAWDSWCESGGSDLLDQDISSSGS 740

Query: 742 VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPIPPCP 785
            + + R V +   CIQ+    RP + +V  ML   +++P P  P
Sbjct: 741 ESEVARCVQIGLLCIQQQAGDRPNIAQVMSMLTTTMDLPKPKQP 784

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SXB3|Y1112_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g11280 OS=Arabidopsis thaliana GN=At1g11280 PE=2 SV=1

 Score =  261 bits (666), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 242/825 (29%), Positives = 368/825 (44%), Gaps = 98/825 (11%)

Query: 8   LLFLLLLPCLTAAQSNGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWY 67
           L   L L C  AA     I+I   LT  ++     SP   + LGF   ++       IW+
Sbjct: 17  LWLSLFLSCGYAA-----ITISSPLTLGQTLS---SPGGFYELGFFSPNNSQNQYVGIWF 68

Query: 68  YKIPSKTIVWYASAVNPAPRG-SKLRLTANRGLVLEDPEGREIWKSE-ISTGQAAFGVLY 125
            KI  + +VW A+   P     + L ++ N  L+L D     +W +   S        L 
Sbjct: 69  KKITPRVVVWVANREKPITTPVANLTISRNGSLILLDSSKNVVWSTRRPSISNKCHAKLL 128

Query: 126 DTGNFLIVNTNSERL-WQSFDHPTDTLLPTQTME------RGGVVSSRRKDTYFSRGRFQ 178
           DTGN +IV+  SE L WQSF++P DT+LP  ++          V+SS +  T  S G F 
Sbjct: 129 DTGNLVIVDDVSENLLWQSFENPGDTMLPYSSLMYNLATGEKRVLSSWKSHTDPSPGDFV 188

Query: 179 FRLLEDGNAVLNTINLESGFAYDAYFWSNTFDTNRS--NAGYRVVFNES---GQLYVLRE 233
            RL     A + T+   S +      W+ T  T     +  Y   F+ S   G    L  
Sbjct: 189 VRLTPQVPAQIVTMRGSSVYKRSGP-WAKTGFTGVPLMDESYTSPFSLSQDVGNGTGLFS 247

Query: 234 NKQRASLVPETVSAKENYLRATLNFDGVFIFYSHPKNNSTGDAIWSVSDVLPENICINND 293
             QR+S +   +   E YL+ T  ++G            TG   W +  + P N+C   D
Sbjct: 248 YLQRSSELTRVIITSEGYLK-TFRYNG------------TG---WVLDFITPANLC---D 288

Query: 294 IRKGLGSGICGFNSICSISGAKRPICQCPKGF-----SLLDPDDAYGSCKPDFILGCEED 348
           +      G CG   +C  S   +  C+C KGF           +    C     L C+ +
Sbjct: 289 LY-----GACGPFGLCVTSNPTK--CKCMKGFVPKYKEEWKRGNMTSGCMRRTELSCQAN 341

Query: 349 ----GKKSGEDLYYIEELRNTDWPTSDYEQISPYGKDECVSSCLKDCQCSA-AVLRDDTC 403
                +  G D++Y   L N   P   YE  S    D+C   CL +C CSA A +    C
Sbjct: 342 LSTKTQGKGVDVFY--RLANVK-PPDLYEYASFVDADQCHQGCLSNCSCSAFAYITGIGC 398

Query: 404 --WKKKLPLSYGKTDRDETGTTFIKIRKVPS--GGKKKVDVLIPVVSV------LFGSSA 453
             W  +L      T R   G  F+ IR   S   G ++  +++  +S+       FGS  
Sbjct: 399 LLWNHELI----DTIRYSVGGEFLSIRLASSELAGSRRTKIIVGSISLSIFVILAFGSYK 454

Query: 454 LINLLLVSACCLGFLVVNR-----KKFMRPHQEDQGVSYMNLRCFTYKELVEVTRGF--K 506
                        +   N      K  + P QE  G+++     F    +   T  F   
Sbjct: 455 YWRYRAKQNVGPTWAFFNNSQDSWKNGLEP-QEISGLTF-----FEMNTIRAATNNFNVS 508

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
            +LG+G FG VYKG   +     +AVK+L+S      +EF  E+  I +  H+NLVRLLG
Sbjct: 509 NKLGQGGFGPVYKG--TLSDKKDIAVKRLSSSSGQGTEEFMNEIKLISKLQHRNLVRLLG 566

Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDS---KPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
            C +G+ +LL+YEF+ N ++ +FLF  +   + +W  R  I  G++ GL YLH + C ++
Sbjct: 567 CCIDGEEKLLIYEFLVNKSLDTFLFDLTLKLQIDWPKRFNIIQGVSRGLLYLHRDSCMRV 626

Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT-AIRGTKGYVAPEWFRNMPITV 682
           IH D+K  NILLDD  N +ISDFGLA++    Q   NT  + GT GY++PE+      + 
Sbjct: 627 IHRDLKVSNILLDDKMNPKISDFGLARMFQGTQHQDNTRKVVGTLGYMSPEYAWTGMFSE 686

Query: 683 KVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV 742
           K D+Y++GVLLLEII  ++ I +     +   L   A++ + E     L++ D+ +  + 
Sbjct: 687 KSDIYAFGVLLLEIISGKK-ISSFCCGEEGKTLLGHAWECWLETGGVDLLDEDISSSCSP 745

Query: 743 TMLH--RFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPIPPCP 785
             +   R V +   CIQ+    RP + +V  M+    ++P P  P
Sbjct: 746 VEVEVARCVQIGLLCIQQQAVDRPNIAQVVTMMTSATDLPRPKQP 790

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	792
224099309	801	predicted protein [Populus trichocarpa]	0.972	0.961	0.581	0.0
224057535	775	predicted protein [Populus trichocarpa]	0.963	0.984	0.572	0.0
255544746	800	ATP binding protein, putative [Ricinus c	0.949	0.94	0.585	0.0
224053032	752	predicted protein [Populus trichocarpa]	0.935	0.985	0.575	0.0
356575025	800	PREDICTED: G-type lectin S-receptor-like	0.960	0.951	0.551	0.0
224103119	799	predicted protein [Populus trichocarpa]	0.982	0.973	0.558	0.0
109676362	2037	CCHC-type integrase [Populus trichocarpa	0.933	0.362	0.582	0.0
224073224	699	predicted protein [Populus trichocarpa]	0.862	0.977	0.560	0.0
224143661	691	predicted protein [Populus trichocarpa]	0.863	0.989	0.568	0.0
356555135	815	PREDICTED: G-type lectin S-receptor-like	0.987	0.959	0.544	0.0

>gi|224099309|ref|XP_002334494.1| predicted protein [Populus trichocarpa] gi|222872794|gb|EEF09925.1| predicted protein [Populus trichocarpa]

 Score =  911 bits (2355), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 459/789 (58%), Positives = 569/789 (72%), Gaps = 19/789 (2%)

Query: 1   MAFHLLSLLF--LLLLPCLTAAQSNGTISIGQQLTAAESTEPWLSPSKDFALGFHQL-DS 57
           MAF +L L F  L++LP    +Q+ G I++G  L+ +E+T  WLSPS DFA GFH L  +
Sbjct: 1   MAFPILHLSFSLLIMLPPFAVSQTGGNITVGASLSTSENTS-WLSPSGDFAFGFHPLYGN 59

Query: 58  KDLFLPAIWYYKIPSKTIVWYASAVNPAPRGSKLRLTANRGLVLEDPEGREIWKSEISTG 117
           K LFL AIWY KIP KTIVWYA+   PAP GSK  LTANRG+ L DP+GRE+W+SE   G
Sbjct: 60  KYLFLLAIWYDKIPEKTIVWYANGDKPAPTGSKAVLTANRGISLTDPQGRELWRSETIIG 119

Query: 118 QAAFGVLYDTGNFLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSSRRKDTYFSRGRF 177
             A+G + D GNF++ +  S++LW+SF +P DTLLP+Q ++RG  +SSR+ +  FS GRF
Sbjct: 120 VVAYGAMTDKGNFVLQDRVSDKLWESFKNPADTLLPSQVLDRGMTLSSRQSENNFSMGRF 179

Query: 178 QFRLLEDGNAVLNTINLESGFAYDAYFWSNT-FDTNRSNAGYRVVFNESGQLYVLRENKQ 236
           Q +L +DGN  L TINL S +  + Y+ S T    + S+ GY+VVFNESG LY+LREN Q
Sbjct: 180 QLKLTDDGNLELATINLPSDYTNEPYYKSGTDGGLDSSSPGYQVVFNESGYLYILRENDQ 239

Query: 237 RASLVPE-TVSAKENYLRATLNFDGVFIFYSHPKNNSTGDAIWSVSDVLPENICINNDIR 295
             SL    T S  + Y RATLNFDG+F  Y HPK  STG+  W+     P+NIC  + + 
Sbjct: 240 IFSLTQRVTASTGDFYRRATLNFDGLFTQYYHPKA-STGNERWTPIWSQPDNICQASFVS 298

Query: 296 KGLGSGICGFNSICSISGAKRPICQCPKGFSLLDPDDAYGSCKPDFILGCEEDGKKSGED 355
            G  SG CGFNS+C ++  +RPIC+CP G+SLLDP D YGSC+P++   CEED     ED
Sbjct: 299 SG--SGTCGFNSVCRLNSDRRPICECPGGYSLLDPSDQYGSCRPNYTQSCEEDEVAPVED 356

Query: 356 LYYIEELRNTDWPTSDYEQISPYGKDECVSSCLKDCQCSAAVLRD-DTCWKKKLPLSYGK 414
           LY  EEL NTDWPTSDY  + P+ +++C  SCL DC C+ A+ R  D CWKKKLPLS G+
Sbjct: 357 LYDFEELTNTDWPTSDYALLKPFTEEKCRQSCLNDCMCAVAIFRSGDMCWKKKLPLSNGR 416

Query: 415 TDRDETGTTFIKIRKVP--------SGGKKKVDVLIPVVSVLFGSSALINLLLVSACCLG 466
              +  G   +K+R+             KK  D LI V SV  G S  +N LLV A  + 
Sbjct: 417 VQTNLDGKALLKVRRSNVNPRSPYFPNNKKDRDGLILVGSVFLGCSVFVNFLLVCAIFMC 476

Query: 467 FLVVNRKKFMRPHQEDQGVSYMNLRCFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGS 526
           F  + R++  R  Q+D  V   NLRCFTY+EL E T GFKEELGRGAFG VYKG V++GS
Sbjct: 477 FFFIYRRRTKRIPQKDGAVE-TNLRCFTYQELAEATEGFKEELGRGAFGVVYKGVVHIGS 535

Query: 527 SNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTV 586
           S  VAVKKLN+V +D  +EFK EVN IGQTHHKNLVRLLG+C+EG  RLLVYEFMSNG++
Sbjct: 536 SIVVAVKKLNNVAEDRVREFKTEVNVIGQTHHKNLVRLLGFCEEGDQRLLVYEFMSNGSL 595

Query: 587 ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDF 646
           +SF+F D+KP WK+R +IA G+A GL YLHEEC  QIIHCDIKPQNILLD++YNARISDF
Sbjct: 596 SSFIFQDAKPGWKIRIQIAFGVARGLLYLHEECSNQIIHCDIKPQNILLDEYYNARISDF 655

Query: 647 GLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNE 706
           GLAKLL LDQS T+TAIRGTKGYVAPEWFRN+P+TVKVDVYSYGVLLLEIIC RRN+D++
Sbjct: 656 GLAKLLLLDQSQTHTAIRGTKGYVAPEWFRNLPVTVKVDVYSYGVLLLEIICCRRNVDSK 715

Query: 707 ISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTM 766
            +  ++AILTDWAYD Y+E TL+ALV +D  A++++  L RF+M+AFWCIQEDPS RPTM
Sbjct: 716 ATIEEQAILTDWAYDCYREGTLDALVGSDTGALDDIEKLERFLMIAFWCIQEDPSLRPTM 775

Query: 767 RKVTQMLEG 775
           RKVTQMLEG
Sbjct: 776 RKVTQMLEG 784

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224057535|ref|XP_002299255.1| predicted protein [Populus trichocarpa] gi|222846513|gb|EEE84060.1| predicted protein [Populus trichocarpa]

 Score =  908 bits (2346), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 460/804 (57%), Positives = 567/804 (70%), Gaps = 41/804 (5%)

Query: 1   MAFHLLSLL--FLLLLPCLTAAQSNGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSK 58
           MAF L  +L  F LL P    AQ NG  ++G  LTA +    WLSP++DFA GF QLD K
Sbjct: 1   MAFDLPCILYFFFLLFPSSLVAQRNGNATVGDSLTAGDEATLWLSPAEDFAFGFRQLDKK 60

Query: 59  DLFLPAIWYYKIPSKTIVWYASAVNPAPRGSKLRLTANRGLVLEDPEGREIWKSEISTGQ 118
           DL+L AIWY KIP KTIVWYA+   PAP+ S ++LTA  G+VL +P+G EIWKS    G+
Sbjct: 61  DLYLLAIWYNKIPDKTIVWYANGDRPAPKKSTVKLTAELGVVLNNPQGGEIWKSGPGNGE 120

Query: 119 AAFGVLYDTGNFLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSSRRKDTYFSRGRFQ 178
           AA+G + DTGNFL+ N N E+LWQSF+  TDTLLPTQ ME+GG++SSR  +T FS+GRFQ
Sbjct: 121 AAYGFMNDTGNFLVANANGEKLWQSFELLTDTLLPTQIMEKGGILSSRLSETNFSQGRFQ 180

Query: 179 FRLLEDGNAVLNTINLESGFAYDAYFWSNTFDTNRSNAGYRVVFNESGQLYVLRENKQRA 238
           FRL+ DGNAVLNTINL +GF Y+AYFWS T D+N SNAGY+VVFNESG LYVLR N  R 
Sbjct: 181 FRLIPDGNAVLNTINLPTGFPYEAYFWSKTVDSNSSNAGYQVVFNESGYLYVLRANNTRE 240

Query: 239 SL-VPETVSAKENYLRATLNFDGVFIFYSHPKNNSTGDAIWSVSDVLPENICINNDIRKG 297
           +L +   V A ENY RATL+FDGVF+ YSHPK NS G+  WSV   +PENIC    + +G
Sbjct: 241 ALTLGRVVPATENYHRATLHFDGVFVLYSHPK-NSPGNENWSVVRTMPENICT---VVRG 296

Query: 298 L-GSGICGFNSICSISGAKRPICQCPKGFSLLDPDDAYGSCKPDFILG-CEEDGKKSGED 355
           L GSG CG+N +C+IS  KR IC+CP+ FSLLDPDD YG CKPDF    C E+   + ED
Sbjct: 297 LKGSGPCGYNGVCTISTDKRAICRCPQRFSLLDPDDPYGGCKPDFPTQVCAEEVPNAPED 356

Query: 356 LYYIEELRNTDWPTSDYEQISPYGKDECVSSCLKDCQCSAAVLRDDTCWKKKLPLSYGKT 415
            Y +  L N DWP SDYE  +PY  ++C  +CL+D  C+  V  + TCWKK+LPLS G+ 
Sbjct: 357 -YELVPLTNIDWPESDYEMYTPYNIEDCKKACLQDFFCNVIVFGEGTCWKKRLPLSNGRQ 415

Query: 416 DRDETGTTFIKIRK-------VPSGGKKKVDVLIPVVSVLFGSSALINLLLVSACCLGFL 468
                G +F+K+RK        P   KK     + VVSVL G S   N +LV      F 
Sbjct: 416 GESVNGASFMKVRKGNYTLPGPPPIPKKN----LLVVSVLLGGSVFFNFVLVGVVSFAFF 471

Query: 469 VVNRKKFMRPHQEDQGVSYMNLRCFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSN 528
            +   KF R  Q ++ V   NLRCF+YKEL+E T GFKEELGRGAFG VYKG   +GS  
Sbjct: 472 FIYHNKFTRTPQVERAVQ-SNLRCFSYKELMEATNGFKEELGRGAFGIVYKGLTQIGSGV 530

Query: 529 HVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVAS 588
            VA+KK++   ++S+KEFK EV+            ++G+CDEGQ+R+LVYEF+SNG +AS
Sbjct: 531 PVAIKKVDRFVKESDKEFKTEVD------------VIGFCDEGQHRMLVYEFLSNGALAS 578

Query: 589 FLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGL 648
           FLFGD K +W  RT+IA GIA GL YLH+EC TQIIHCDIKPQNILLD+HY+ARI+DFGL
Sbjct: 579 FLFGDVKLSWNQRTQIAFGIARGLLYLHDECSTQIIHCDIKPQNILLDEHYDARIADFGL 638

Query: 649 AKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEIS 708
           AKL        N   +GTKGYVAPEWFRNM ITVKVDVY++GVLLLEIIC RR++D E+ 
Sbjct: 639 AKLF------RNPQHKGTKGYVAPEWFRNMLITVKVDVYNFGVLLLEIICCRRSVDTEVG 692

Query: 709 KVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRK 768
           + ++AILTDWAYD YQE  + ALVE+D EA+N++  L RFVMVA WCIQEDP+ RPTM+ 
Sbjct: 693 E-ERAILTDWAYDCYQEGMMHALVESDEEALNDMKKLERFVMVAIWCIQEDPNLRPTMKM 751

Query: 769 VTQMLEGVVEVPIPPCPWTLNITS 792
           V  MLEG+++VP+PPCP   +I S
Sbjct: 752 VMLMLEGIIQVPVPPCPSPFSIAS 775

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255544746|ref|XP_002513434.1| ATP binding protein, putative [Ricinus communis] gi|223547342|gb|EEF48837.1| ATP binding protein, putative [Ricinus communis]

 Score =  900 bits (2326), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/775 (58%), Positives = 557/775 (71%), Gaps = 23/775 (2%)

Query: 20  AQSNGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYA 79
           AQ+  TI +G  L AA+  E WLSPS DFA GF QL++K+L+L AI Y KI  KTIVWYA
Sbjct: 23  AQNGDTIIVGDFLAAADPAESWLSPSGDFAFGFRQLENKNLYLLAICYNKISDKTIVWYA 82

Query: 80  SAVNPAPRGSKLRLTANRGLVLEDPEGREIWKSEISTGQAAFGVLYDTGNFLIVNTNSER 139
           +  +PAP GSK+ LTA+RGLVL  P+G+EIWKS I+ G AA G++ DTGNF IVNT  E+
Sbjct: 83  NGDDPAPTGSKVELTADRGLVLTSPQGKEIWKSGINIGDAARGMMNDTGNFRIVNTGGEK 142

Query: 140 LWQSFDHPTDTLLPTQTMERGG-VVSSRRKDTYFSRGRFQFRLLEDGNAVLNTINLESGF 198
           LWQ+FD P DTLLP Q +ERGG ++SSR ++T FSRGRFQFRL+ DGN VLN  NL +G 
Sbjct: 143 LWQTFDDPKDTLLPGQALERGGKILSSRLRETNFSRGRFQFRLIPDGNGVLNANNLRTGD 202

Query: 199 AYDAYFWSNTFDTNRSNAGYRVVFNESGQLYVLRENKQRASLVPE-TVSAKENYLRATLN 257
           AYDAY+W+NT D N SNAG R+VFNESG LY LR + +R  + PE  V   E Y R TLN
Sbjct: 203 AYDAYYWTNTVDANLSNAGLRIVFNESGYLYTLRASNKRELITPERVVPTTEYYHRVTLN 262

Query: 258 FDGVFIFYSHPKNNSTGDAIWSVSDVLPENICINNDIRKGLGSGICGFNSICSISGAKRP 317
           FDGV   YSHPKN ST +  WS+    PENIC    +   +G+G CGFNS+C ++  +R 
Sbjct: 263 FDGVLTQYSHPKN-STDNGNWSIIFSAPENICF---LITDIGTGPCGFNSVCQLNADQRA 318

Query: 318 ICQCPKGFSLLDPDDAYGSCKPDFILGCEEDGKKSGEDLYYIEELRNTDWPTSDYEQISP 377
           IC+CP  FS +DP D Y  CKPDF     ED   +  + Y   EL NTDWPTSDYE+   
Sbjct: 319 ICRCPPRFSSVDPGDDYAGCKPDFSTQFCEDAPSTSPEDYDFLELTNTDWPTSDYERYDS 378

Query: 378 YGKDECVSSCLKDCQCSAAVLRDDTCWKKKLPLSYGKTDRDETGTTFIKIRKVPSGG--- 434
           Y  +EC  +C++DC C+  V R  +CWKKKLPLS G+      G  FIK+RK    G   
Sbjct: 379 YNIEECQKACIQDCFCNVVVFRG-SCWKKKLPLSNGRQSEKVNGRAFIKVRKDDYMGRGL 437

Query: 435 --------KKKVDVLIPVVSVLFGSSALINLLLVSACCLGFLVVNRKKFMRPHQEDQGVS 486
                   K+  D L+ V+SVL GSS  IN +L+      FL    KK     Q ++   
Sbjct: 438 PPRPFPNAKEDQDSLVLVISVLLGSSVFINFILIGLVTFCFLFFYHKKSTGIPQGEKS-- 495

Query: 487 YMNLRCFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEF 546
             NLRCF+YKELVE T+GFKEELGRG+FG VYKG + MG++  VAVKKL+ V +  EKE+
Sbjct: 496 --NLRCFSYKELVEATKGFKEELGRGSFGIVYKGLIEMGTTVPVAVKKLDRVVEYGEKEY 553

Query: 547 KAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM 606
           KAEV  IGQTHHKNLV+LLG+CDEGQ +LLVYE +SNGT+A+FLFGD+K +WK RT+IA 
Sbjct: 554 KAEVKAIGQTHHKNLVQLLGFCDEGQQKLLVYELLSNGTLANFLFGDTKLSWKQRTQIAF 613

Query: 607 GIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGT 666
           GIA GL YLHEEC TQIIHCDIKPQNIL+D++Y+A+ISDFGLAKLL LDQS T T IRGT
Sbjct: 614 GIARGLVYLHEECNTQIIHCDIKPQNILVDEYYDAKISDFGLAKLLLLDQSQTFTTIRGT 673

Query: 667 KGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQER 726
           KGYVAPEWFRN+PITVKVD YS+GVLLLEIIC RR++D EIS  ++AILTDWAYD Y E 
Sbjct: 674 KGYVAPEWFRNVPITVKVDAYSFGVLLLEIICSRRSVDTEISG-ERAILTDWAYDCYMEG 732

Query: 727 TLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPI 781
            ++ LVEND EA++++  + RF+MVA WCIQEDP+ RPTM+ V  MLEG+++V +
Sbjct: 733 RIDDLVENDEEALSDLKKVERFLMVAIWCIQEDPTLRPTMKTVILMLEGIIQVAV 787

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224053032|ref|XP_002297673.1| predicted protein [Populus trichocarpa] gi|222844931|gb|EEE82478.1| predicted protein [Populus trichocarpa]

 Score =  894 bits (2309), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/780 (57%), Positives = 555/780 (71%), Gaps = 39/780 (5%)

Query: 23  NGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAV 82
           NG  ++G  LTA +    WLSP++DFA GF QLD KDL+L AIWY KIP KTIVWYA+  
Sbjct: 2   NGNATVGDSLTAGDEATLWLSPAEDFAFGFRQLDKKDLYLLAIWYNKIPDKTIVWYANGD 61

Query: 83  NPAPRGSKLRLTANRGLVLEDPEGREIWKSEISTGQAAFGVLYDTGNFLIVNTNSERLWQ 142
            PAP+ S ++LTA  G+VL +P+G EIWKS    G+AA+G + DTGNFL+ N N E+LWQ
Sbjct: 62  RPAPKKSTVKLTAELGVVLNNPQGGEIWKSGPGNGEAAYGFMNDTGNFLVANANGEKLWQ 121

Query: 143 SFDHPTDTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDA 202
           SF+  TDTLLPTQ ME+GG++SSR  +T FS+GRFQFRL+ DGNAVLNTINL +GF Y+A
Sbjct: 122 SFELLTDTLLPTQIMEKGGILSSRLSETNFSQGRFQFRLIPDGNAVLNTINLPTGFPYEA 181

Query: 203 YFWSNTFDTNRSNAGYRVVFNESGQLYVLRENKQRASL-VPETVSAKENYLRATLNFDGV 261
           YFWS T D+N SNAGY+VVFNESG LYVLR N  R +L +   V A ENY RATL+FDGV
Sbjct: 182 YFWSKTVDSNSSNAGYQVVFNESGYLYVLRANNTREALTLGRVVPATENYHRATLHFDGV 241

Query: 262 FIFYSHPKNNSTGDAIWSVSDVLPENICINNDIRKGL-GSGICGFNSICSISGAKRPICQ 320
           F+ YSHPK NS G+  WSV   +PENIC    + +GL GSG CG+N +C+IS  KR IC+
Sbjct: 242 FVLYSHPK-NSPGNENWSVVRTMPENICT---VVRGLKGSGPCGYNGVCTISTDKRAICR 297

Query: 321 CPKGFSLLDPDDAYGSCKPDFILG-CEEDGKKSGEDLYYIEELRNTDWPTSDYEQISPYG 379
           CP+ FSLLDPDD YG CKPDF    C E+   + ED Y +  L N DWP SDYE  +PY 
Sbjct: 298 CPQRFSLLDPDDPYGGCKPDFPTQVCAEEVPNAPED-YELVPLTNIDWPESDYEMYTPYN 356

Query: 380 KDECVSSCLKDCQCSAAVLRDDTCWKKKLPLSYGKTDRDETGTTFIKIRK-------VPS 432
            ++C  +CL+D  C+  V  + TCWKK+LPLS G+      G +F+K+RK        P 
Sbjct: 357 IEDCKKACLQDFFCNVIVFGEGTCWKKRLPLSNGRQGESVNGASFMKVRKGNYTLPGPPP 416

Query: 433 GGKKKVDVLIPVVSVLFGSSALINLLLVSACCLGFLVVNRKKFMRPHQEDQGVSYMNLRC 492
             KK     + VVSVL G S   N +LV      F  +   KF R  Q ++ V   NLRC
Sbjct: 417 IPKKN----LLVVSVLLGGSVFFNFVLVGVVSFAFFFIYHNKFTRTPQVERAVQ-SNLRC 471

Query: 493 FTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG 552
           F+YKEL+E T GFKEELGRGAFG VYKG   +GS   VA+KK++   ++S+KEFK EV+ 
Sbjct: 472 FSYKELMEATNGFKEELGRGAFGIVYKGLTQIGSGVPVAIKKVDRFVKESDKEFKTEVD- 530

Query: 553 IGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGL 612
                      ++G+CDEGQ+R+LVYEF+SNG +ASFLFGD K +W  RT+IA GIA GL
Sbjct: 531 -----------VIGFCDEGQHRMLVYEFLSNGALASFLFGDVKLSWNQRTQIAFGIARGL 579

Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAP 672
            YLH+EC TQIIHCDIKPQNILLD+HY+ARI+DFGLAKL        N   +GTKGYVAP
Sbjct: 580 LYLHDECSTQIIHCDIKPQNILLDEHYDARIADFGLAKLF------RNPQHKGTKGYVAP 633

Query: 673 EWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALV 732
           EWFRNM ITVKVDVY++GVLLLEIIC RR++D E+ + ++AILTDWAYD YQE  + ALV
Sbjct: 634 EWFRNMLITVKVDVYNFGVLLLEIICCRRSVDTEVGE-ERAILTDWAYDCYQEGMMHALV 692

Query: 733 ENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPIPPCPWTLNITS 792
           E+D EA+N++  L RFVMVA WCIQEDP+ RPTM+ V  MLEG+++VP+PPCP   +I S
Sbjct: 693 ESDEEALNDMKKLERFVMVAIWCIQEDPNLRPTMKMVMLMLEGIIQVPVPPCPSPFSIAS 752

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356575025|ref|XP_003555643.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Glycine max]

 Score =  875 bits (2260), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 437/793 (55%), Positives = 562/793 (70%), Gaps = 32/793 (4%)

Query: 8   LLFLLLLPCLTAAQSNGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWY 67
           LL LL LP ++A      +SIG+ L A    + WLSPS+DFA GFHQLD+ DL+L AI Y
Sbjct: 14  LLPLLQLPYVSATN----VSIGETLVAGNGGKRWLSPSEDFAFGFHQLDN-DLYLLAISY 68

Query: 68  YKIPSKTIVWYASAVNPAPRGSKLRLTANRGLVLEDPEGREIWKSEISTGQAAFGVLYDT 127
             IP  + +WYA+  NPAP+GSKL L    GLVL+ P+G E+W S++ +G  ++G++ DT
Sbjct: 69  QNIPRDSFIWYANGDNPAPKGSKLELNQYTGLVLKSPQGVELWTSQLISGTISYGLMNDT 128

Query: 128 GNFLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLLEDGNA 187
           GNF +++ NS+ LW SF +PTDTL+PTQ ME  G +SSR+K+  FSRGRFQFRLL DGNA
Sbjct: 129 GNFQLLDENSQVLWDSFSNPTDTLVPTQIMEVKGTLSSRQKEANFSRGRFQFRLLPDGNA 188

Query: 188 VLNTINLESGFAYDAYFWSNTFD-TNRSNAGYRVVFNESGQLYVLRENKQRASLV--PET 244
           VLN INL + + YDA++ S T+D TN +N+G++V+F+ SG LY+L+ + ++  +    + 
Sbjct: 189 VLNPINLPTNYTYDAHYISATYDSTNTTNSGFQVIFDNSG-LYILKRSGEKVYITNPKDA 247

Query: 245 VSAKENYLRATLNFDGVFIFYSHPKNNSTGDAIWSVSDVLPENICINNDIRKGLGSGICG 304
           +S    Y RAT+NFDG F   ++PKN ++  + W+V   LP+NIC+N     G GSG+CG
Sbjct: 248 LSTDSYYYRATINFDGTFTISNYPKNPASNPS-WTVMKTLPDNICMNLLGNTG-GSGVCG 305

Query: 305 FNSICSISGAKRPICQCPKGFSLLDPDDAYGSCKPDFILGCEEDGKKSGEDLYYIEELRN 364
           FNSIC++   +RP C CP+G+S LD  D YGSCKP+  LGC   G+    DLY+++E+ N
Sbjct: 306 FNSICTLKADQRPKCSCPEGYSPLDSRDEYGSCKPNLELGCGSSGQSLQGDLYFMKEMAN 365

Query: 365 TDWPTSDYEQISPYGKDECVSSCLKDCQCSAAVLRDDTCWKKKLPLSYGKTDRDETGTTF 424
           TDWP SDYE   PY  ++C +SCL+DC C+ ++ RDD+C+KKKLPLS G+ DR    + F
Sbjct: 366 TDWPVSDYELYKPYNSEDCKTSCLQDCLCAVSIFRDDSCYKKKLPLSNGRRDRAVGASAF 425

Query: 425 IKIRK-----VPSGG-------KKKVDVLIPVVSVLFGSSALINLLLVSACCLGFLVVNR 472
           IK+ K      P          KK  D LI V+SVL G S   NL  VSA  +GF     
Sbjct: 426 IKLMKNGVSLSPPNPFIEEKKYKKDQDTLITVISVLLGGSVFFNL--VSAVWVGFYFYYN 483

Query: 473 KKFMRPHQEDQGVSYMNLRCFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAV 532
           KK       ++  +  NL  FT+ ELV+ T  FKEELGRG+ G VYKG  N+ +   +AV
Sbjct: 484 KK----SSTNKTATESNLCSFTFAELVQATDNFKEELGRGSCGIVYKGTTNLAT---IAV 536

Query: 533 KKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFG 592
           KKL+ V +D +KEFK EVN IGQTHHK+LVRLLGYCDE Q+R+LVYEF+SNGT+A+FLFG
Sbjct: 537 KKLDKVLKDCDKEFKTEVNVIGQTHHKSLVRLLGYCDEEQHRILVYEFLSNGTLANFLFG 596

Query: 593 DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLL 652
           D KPNW  R +IA GIA GL YLHEECCTQIIHCDIKPQNILLD+ YNARISDFGL+KLL
Sbjct: 597 DFKPNWNQRVQIAFGIARGLVYLHEECCTQIIHCDIKPQNILLDEQYNARISDFGLSKLL 656

Query: 653 TLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDK 712
            +++SHT T IRGTKGYVAP+WFR+ PIT KVDVYS+GVLLLEIIC RRN+D E+   +K
Sbjct: 657 KINESHTETGIRGTKGYVAPDWFRSAPITTKVDVYSFGVLLLEIICCRRNVDGEVGNEEK 716

Query: 713 AILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM 772
           AILTDWAYD Y+   ++ L+END EA+++   L RFVMVA WC+QEDPS RP M+KV  M
Sbjct: 717 AILTDWAYDCYRAGRIDILLENDDEAIDDTNRLERFVMVAIWCLQEDPSLRPPMKKVMLM 776

Query: 773 LEGVVEVPIPPCP 785
           LEG+  V IPP P
Sbjct: 777 LEGIAPVTIPPSP 789

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103119|ref|XP_002334088.1| predicted protein [Populus trichocarpa] gi|222839594|gb|EEE77931.1| predicted protein [Populus trichocarpa]

 Score =  870 bits (2249), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/799 (55%), Positives = 560/799 (70%), Gaps = 21/799 (2%)

Query: 1   MAFHLLSLLF--LLLLPCLTAAQSNGTISIGQQLTAAESTEPWLSPSKDFALGFHQL-DS 57
           MAF +L L F  L++LP    +Q+ G I++G  L+ +++T  WLSPS DFA GF+QL  +
Sbjct: 1   MAFPILHLSFSLLIMLPPFAVSQTGGNITVGASLSTSDNTS-WLSPSGDFAFGFYQLYGN 59

Query: 58  KDLFLPAIWYYKIPSKTIVWYASAVNPAPRGSKLRLTANRGLVLEDPEGREIWKSEISTG 117
           KDLFL AIWY KIP KTIVWYA+   PAP GSK  LTANRG+ L DP+GRE+W+SE   G
Sbjct: 60  KDLFLLAIWYDKIPDKTIVWYANGDKPAPTGSKAVLTANRGISLTDPQGRELWRSETIIG 119

Query: 118 QAAFGVLYDTGNFLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSSRRKDTYFSRGRF 177
             A+G + DTGNF++ +  S++LW+SF +P DTLLP+Q ++RG  +SSR+ +T FS GRF
Sbjct: 120 DVAYGAMTDTGNFVLRDRVSDKLWESFKNPADTLLPSQVLDRGMTLSSRQSETNFSMGRF 179

Query: 178 QFRLLEDGNAVLNTINLESGFAYDAYFWSNT-FDTNRSNAGYRVVFNESGQLYVLRENKQ 236
           Q +L +DGN VL TINL S +  + Y+ S T    + S+ GY+VVFNESG LY+LR+N Q
Sbjct: 180 QLKLRDDGNLVLATINLPSDYTNEPYYKSGTDGGLDSSSPGYQVVFNESGYLYILRKNDQ 239

Query: 237 RASLVPE-TVSAKENYLRATLNFDGVFIFYSHPKNNSTGDAIWSVSDVLPENICINNDIR 295
             SL    T S  + Y RATLNFDGVF  Y HPK  STG+  W+     P+NIC  + + 
Sbjct: 240 IFSLTQRVTASTGDFYHRATLNFDGVFTQYYHPKA-STGNERWTPIWSQPDNICQASSVS 298

Query: 296 KGLGSGICGFNSICSISGAKRPICQCPKGFSLLDPDDAYGSCKPDFILGCEEDGKKSGED 355
            G  SG CGFNS+C ++   RPIC+CP G+SLLDP D YGSC+P++   CEED     ED
Sbjct: 299 AG--SGTCGFNSVCRLNSDGRPICECPGGYSLLDPSDQYGSCRPNYTQSCEEDEVAPVED 356

Query: 356 LYYIEELRNTDWPTSDYEQISPYGKDECVSSCLKDCQCSAAVLRD-DTCWKKKLPLSYGK 414
           LY  EEL NTDWPTSDY  + P+ +++C  SCL DC C+ A+ R  D CWKKKLPLS G+
Sbjct: 357 LYDFEELTNTDWPTSDYALLQPFTEEKCRQSCLNDCMCAVAIFRSGDMCWKKKLPLSNGR 416

Query: 415 TDRDETGTTFIKIRKVP--------SGGKKKVDVLIPVVSVLFGSSALINLLLVSACCLG 466
                     +K+R+             KK  D LI V SV  G S  +N LLV A C+G
Sbjct: 417 VQTIVDAKALLKVRRSNVNPRSPYFPNNKKDRDGLILVGSVFLGCSVFVNFLLVCAICMG 476

Query: 467 FLVVNRKKFMRPHQEDQGVSYMNLRCFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGS 526
           F  + R++  R  Q+D  V   NLRCFTY+EL E T GFKEELGRGAFG VY+G V++GS
Sbjct: 477 FFFIYRRRTKRIPQKDGAVE-TNLRCFTYQELAEATEGFKEELGRGAFGVVYRGVVHIGS 535

Query: 527 SNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTV 586
           S  VAVKKLN+V +D  +EFK EVN IGQTHHKNLVRLLG+C+EG  RLLVYEFMSNG++
Sbjct: 536 SIVVAVKKLNNVAEDRVREFKTEVNVIGQTHHKNLVRLLGFCEEGDQRLLVYEFMSNGSL 595

Query: 587 ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDF 646
           +SF+F D+KP WK+R +IA G+A GL YLHE+  +QIIHCDIKPQNILLD+  NARISDF
Sbjct: 596 SSFIFQDAKPGWKIRIQIAFGVARGLLYLHED--SQIIHCDIKPQNILLDESLNARISDF 653

Query: 647 GLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNE 706
           GLAKLL  DQ+ T TAIRGTKGYVAPEWF+N+P+T KVD YS+G+LLLE++C R+N +  
Sbjct: 654 GLAKLLKTDQTKTTTAIRGTKGYVAPEWFKNLPVTTKVDTYSFGILLLELVCCRKNFEIN 713

Query: 707 ISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTM 766
             +  + +L DWA D  +E  L  LVE D EAM ++  + RFVMVA WCIQEDPS RP M
Sbjct: 714 AMQEHQIVLADWACDCLKEGKLNLLVEEDEEAMEDMKRVERFVMVAIWCIQEDPSLRPGM 773

Query: 767 RKVTQMLEGVVEVPIPPCP 785
           +KV QMLEG V+V +PP P
Sbjct: 774 KKVVQMLEGGVQVSVPPDP 792

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|109676362|gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]

 Score =  870 bits (2248), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 443/761 (58%), Positives = 538/761 (70%), Gaps = 22/761 (2%)

Query: 9   LFLLLLPCLTAAQSNGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYY 68
           L ++LL  +  AQ+NG +  G  +TA + +  W S S +FA GF QL++KD FL +IWY 
Sbjct: 43  LTMVLLQLMAVAQTNGRVPTGASITATDDSPSWPSASGEFAFGFRQLENKDYFLLSIWYE 102

Query: 69  KIPSKTIVWYASAVNP-----APRGSKLRLTANRGLVLEDPEGREIWKSEISTGQA-AFG 122
           KIP KT+VWYA   +P      PRGSKL LT +RGL+L DP+G +IW S I  G A + G
Sbjct: 103 KIPEKTVVWYAIGEDPTDDPAVPRGSKLELTDDRGLLLADPQGNQIWSSGIPPGAAVSSG 162

Query: 123 VLYDTGNFLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLL 182
           V+ DTGNF++ N NS RLW+SF++PTDTLLPTQ ME GGVVSSRR +T FS GRFQ RLL
Sbjct: 163 VMNDTGNFVLQNRNSFRLWESFNNPTDTLLPTQIMEVGGVVSSRRTETNFSLGRFQLRLL 222

Query: 183 EDGNAVLNTINLESGFAYDAYFWSNTFD-TNRSNAGYRVVFNESGQLYVLRENKQRASLV 241
           ++GN VLN +NL + F YD Y+ S T D +N SN+GYR++FNESG +Y+LR N     L 
Sbjct: 223 DNGNLVLNYMNLPTKFVYDDYYSSETSDASNSSNSGYRLIFNESGYMYILRRNGLIEDLT 282

Query: 242 PETVSAKENYLRATLNFDGVFIFYSHPKNNSTGDAIWSVSDVLPENICINNDIRKGLGSG 301
              +   + Y RATLNFDGVF  Y +PK  S+G+  WS     P++IC+N  +   LGSG
Sbjct: 283 KTALPTIDFYHRATLNFDGVFTQYFYPKA-SSGNRSWSSVWSKPDDICVN--MGADLGSG 339

Query: 302 ICGFNSICSISGAKRPICQCPKGFSLLDPDDAYGSCKPDFILGCEEDGKKSGEDLYYIEE 361
            CG+NSIC++   KRP C+CP+GFSLLD +D YGSC PDF L C +DG  S ED Y   E
Sbjct: 340 ACGYNSICNLKADKRPECKCPQGFSLLDQNDKYGSCIPDFELSCRDDGLNSTEDQYDFVE 399

Query: 362 LRNTDWPTSDYEQISPYGKDECVSSCLKDCQCSAAVLRDDTCWKKKLPLSYGKTDRDETG 421
           L N DWPTSDYE+  P  +DEC  SCL DC CS A+ RD  CWKKKLPLS G+ D    G
Sbjct: 400 LINVDWPTSDYERYKPINEDECRKSCLNDCLCSVAIFRDG-CWKKKLPLSNGRFDIGMNG 458

Query: 422 TTFIKIRK--VP--------SGGKKKVDVLIPVVSVLFGSSALINLLLVSACCLGFLVVN 471
             F+K  K  VP         G KKK D+     SV+ G+S  +N +LV A CL    + 
Sbjct: 459 KAFLKFPKGYVPLDRPPPQLPGEKKKPDIKFITGSVVLGTSVFVNFVLVGAFCLTSSFIY 518

Query: 472 RKKFMRPHQEDQGVSYMNLRCFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVA 531
           RKK  +  +   G+   NLR FTYKEL E T  FK+E+GRG FG VYKG +  GS+  VA
Sbjct: 519 RKKTEKVKEGGSGLE-TNLRYFTYKELAEATNDFKDEVGRGGFGVVYKGTIQAGSTRVVA 577

Query: 532 VKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLF 591
           VKKL+ V QD EKEFK EV  IGQTHHKNLVRLLG+CDEGQNRLLVYEF+SNGT+A+FLF
Sbjct: 578 VKKLDKVVQDGEKEFKTEVQVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLSNGTLANFLF 637

Query: 592 GDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKL 651
           G SKPNWK RT+IA GIA GL YLHEEC TQIIHCDIKPQNILLD++YNARISDFGLAKL
Sbjct: 638 GCSKPNWKQRTQIAFGIARGLLYLHEECGTQIIHCDIKPQNILLDNYYNARISDFGLAKL 697

Query: 652 LTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVD 711
           L +DQS T TAIRGTKGYVAPEWFRN PITVKVDVYS+GV+LLEIIC RRN+D EI +V+
Sbjct: 698 LVMDQSKTQTAIRGTKGYVAPEWFRNRPITVKVDVYSFGVMLLEIICCRRNVDLEIGEVE 757

Query: 712 KAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVA 752
             +LTDWAYD Y + +L+ L+ +D EA N+++ L R +  A
Sbjct: 758 NPVLTDWAYDCYMDGSLDVLIGDDTEAKNDISTLERLLKPA 798

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224073224|ref|XP_002304031.1| predicted protein [Populus trichocarpa] gi|222841463|gb|EEE79010.1| predicted protein [Populus trichocarpa]

 Score =  842 bits (2176), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/776 (56%), Positives = 521/776 (67%), Gaps = 93/776 (11%)

Query: 17  LTAAQSNGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIV 76
           +  AQ+NG + +G  +TA + +  WLS S +FA GF QL++KD FL +IWY KIP KT+V
Sbjct: 1   MAVAQTNGRVPVGASITATDDSPSWLSASGEFAFGFRQLENKDYFLLSIWYEKIPEKTVV 60

Query: 77  WYASAVNP-----APRGSKLRLTANRGLVLEDPEGREIWKSEISTGQAAFGVLYDTGNFL 131
           WYA   +P      PRGSK+ LT +RGL+L DP+G  IW S I  G  + GV+ DTGNF+
Sbjct: 61  WYAIGEDPTDDPAVPRGSKVELTDDRGLLLADPQGNLIWTSRILLGAVSSGVMNDTGNFV 120

Query: 132 IVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLLEDGNAVLNT 191
           + N NSERLW+SF++PTDTLLPTQ ME GGVVSSRR +T FS GRFQ RLL++GN VLN+
Sbjct: 121 LQNRNSERLWESFNNPTDTLLPTQIMEAGGVVSSRRTETNFSLGRFQLRLLDNGNLVLNS 180

Query: 192 INLESGFAYDAYFWSNTFD-TNRSNAGYRVVFNESGQLYVLRENKQRASLVPETVSAKEN 250
           +NL + FAYD Y+ S T D +N SN GYR++FNESG  Y+L       S +   +SA  +
Sbjct: 181 MNLSTKFAYDDYYRSGTSDASNSSNTGYRLLFNESG--YILWRPPPSPSSL---ISADIH 235

Query: 251 YLRATLNFDGVFIFYSHPKNNSTGDAIWSVSDVLPENICINNDIRKGLGSGICGFNSICS 310
           Y+++                       WS     P++IC+N  +   LGSG CG+NSIC+
Sbjct: 236 YIQS-----------------------WSSVWSKPDDICVN--MGADLGSGACGYNSICN 270

Query: 311 ISGAKRPICQCPKGFSLLDPDDAYGSCKPDFILGCEEDGKKSGEDLYYIEELRNTDWPTS 370
           +   KRP C+CP+GFSLLD +D YGSC PDF L C +DG  S ED Y   EL N DWPTS
Sbjct: 271 LKADKRPECKCPQGFSLLDQNDKYGSCIPDFELSCRDDGLNSTEDQYDFVELINVDWPTS 330

Query: 371 DYEQISPYGKDECVSSCLKDCQCSAAVLRDDTCWKKKLPLSYGKTDRDETGTTFIKIRKV 430
           DYE+  P  +DEC  SCL DC CS A+ RD  CWKKKLPLS G+ D    G  F+K    
Sbjct: 331 DYERYKPINEDECRKSCLNDCLCSVAIFRD-GCWKKKLPLSNGRFDIGMNGKAFLKF--- 386

Query: 431 PSGGKKKVDVLIPVVSVLFGSSALINLLLVSACCLGFLVVNRKKFMRPHQEDQGVSYMNL 490
           P G                                                     Y NL
Sbjct: 387 PKG-----------------------------------------------------YTNL 393

Query: 491 RCFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEV 550
           R FTYKEL E T  FK+E+GRG FG VYKG +  GS+  VAVKKL+ V QD EKEFK EV
Sbjct: 394 RYFTYKELAEATNDFKDEVGRGGFGVVYKGTIQAGSTRVVAVKKLDKVVQDGEKEFKTEV 453

Query: 551 NGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAG 610
             IGQTHHKNLVRLLG+CDEGQNRLLVYEF+SNGT+A+FLFG SKPNWK RT+IA GIA 
Sbjct: 454 QVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLSNGTLANFLFGCSKPNWKQRTQIAFGIAR 513

Query: 611 GLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV 670
           GL YLHEEC TQIIHCDIKPQNILLD++YNARISDFGLAKLL +DQS T TAIRGTKGYV
Sbjct: 514 GLLYLHEECGTQIIHCDIKPQNILLDNYYNARISDFGLAKLLVMDQSKTQTAIRGTKGYV 573

Query: 671 APEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEA 730
           APEWFRN PITVKVDVYS+GV+LLEIIC RRN+D EI +V+  +LTDWAYD Y + +L+ 
Sbjct: 574 APEWFRNRPITVKVDVYSFGVMLLEIICCRRNVDLEIGEVENPVLTDWAYDCYMDGSLDV 633

Query: 731 LVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPIPPCPW 786
           L+ +D EA N+++ L R + V  WCIQEDPS RPTMRKVTQMLEGVVEVP  P P+
Sbjct: 634 LIGDDTEAKNDISTLERLLKVGIWCIQEDPSLRPTMRKVTQMLEGVVEVPAAPNPF 689

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224143661|ref|XP_002336066.1| predicted protein [Populus trichocarpa] gi|222869874|gb|EEF07005.1| predicted protein [Populus trichocarpa]

 Score =  842 bits (2175), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/765 (56%), Positives = 510/765 (66%), Gaps = 81/765 (10%)

Query: 23  NGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAV 82
           NG++ +G  +TA +    WLS S +FA GF  L+ KD FL +IWY KIP KTIVWYA+  
Sbjct: 1   NGSMPVGAFITATDDAPSWLSSSGEFAFGFQPLEYKDHFLLSIWYAKIPEKTIVWYANGD 60

Query: 83  NPAPRGSKLRLTANRGLVLEDPEGREIWKSEISTGQAAFGVLYDTGNFLIVNTNSERLWQ 142
           NPAPR SK+ L  + GLVL DP+G  IW S    G  + GV+ DTGNF++ N+NS RLW+
Sbjct: 61  NPAPRESKVELRGDSGLVLTDPQGNLIWSSGSLLGTVSSGVMNDTGNFVLQNSNSFRLWE 120

Query: 143 SFDHPTDTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDA 202
           SF +PTDTLLPTQ ME GGVVSSRR +T FS GRFQ RLL++GN VLN +NL + F YD 
Sbjct: 121 SFSNPTDTLLPTQIMEVGGVVSSRRTETNFSLGRFQLRLLDNGNLVLNYMNLPTKFVYDD 180

Query: 203 YFWSNTFD-TNRSNAGYRVVFNESGQLYVLRENKQRASLVPETVSAKENYLRATLNFDGV 261
           Y+ S T D +N SN+GYR++FNESG +Y+LR N     L    +   + Y RATLNFD  
Sbjct: 181 YYSSETSDASNSSNSGYRLIFNESGYMYILRRNGLIEDLTKTALPTIDFYHRATLNFDA- 239

Query: 262 FIFYSHPKNNSTGDAIWSVSDVLPENICINNDIRKGLGSGICGFNSICSISGAKRPICQC 321
                                               LGSG CG+NSIC++   KRP C+C
Sbjct: 240 -----------------------------------DLGSGACGYNSICNLKADKRPECKC 264

Query: 322 PKGFSLLDPDDAYGSCKPDFILGCEEDGKKSGEDLYYIEELRNTDWPTSDYEQISPYGKD 381
           P+GFSLLD +D YGSC PDF L C +DG  S ED Y   EL N DWPTSDYE+  P  +D
Sbjct: 265 PQGFSLLDQNDKYGSCIPDFELSCRDDGLNSTEDQYDFVELINVDWPTSDYERYKPINED 324

Query: 382 ECVSSCLKDCQCSAAVLRDDTCWKKKLPLSYGKTDRDETGTTFIKIRKVPSGGKKKVDVL 441
           EC  SCL DC CS A+ RD  CWKKKLPLS G+ D    G  F+K    P G K +    
Sbjct: 325 ECRKSCLNDCLCSVAIFRD-GCWKKKLPLSNGRFDIGMNGKAFLKF---PKGYKTE---- 376

Query: 442 IPVVSVLFGSSALINLLLVSACCLGFLVVNRKKFMRPHQEDQGVSYMNLRCFTYKELVEV 501
                V  G S L                                  NLR FTYKEL E 
Sbjct: 377 ----KVKEGGSGL--------------------------------ETNLRYFTYKELAEA 400

Query: 502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           T  FK+E+GRG FG VYKG +  GS+  VAVKKL+ V QD EKEFK EV  IGQTHHKNL
Sbjct: 401 TNDFKDEVGRGGFGVVYKGTIQAGSTRVVAVKKLDKVVQDGEKEFKTEVQVIGQTHHKNL 460

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           VRLLG+CDEGQNRLLVYEF+SNGT+A+FLFG SKPNWK RT+IA GIA GL YLHEEC T
Sbjct: 461 VRLLGFCDEGQNRLLVYEFLSNGTLANFLFGCSKPNWKQRTQIAFGIARGLLYLHEECGT 520

Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT 681
           QIIHCDIKPQNILLD++YNARISDFGLAKLL +DQS T TAIRGTKGYVAPEWFRN PIT
Sbjct: 521 QIIHCDIKPQNILLDNYYNARISDFGLAKLLVMDQSKTQTAIRGTKGYVAPEWFRNRPIT 580

Query: 682 VKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN 741
           VKVDVYS+GV+LLEIIC RRN+D EI +V+  +LTDWAYD Y + +L+ L+ +D EA N+
Sbjct: 581 VKVDVYSFGVMLLEIICCRRNVDLEIGEVENPVLTDWAYDCYMDGSLDVLIGDDTEAKND 640

Query: 742 VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPIPPCPW 786
           ++ L R + V  WCIQEDPS RPTMRKVTQMLEGVVEVP  P P+
Sbjct: 641 ISTLERLLKVGIWCIQEDPSLRPTMRKVTQMLEGVVEVPAAPNPF 685

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555135|ref|XP_003545892.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1-like [Glycine max]

 Score =  834 bits (2154), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 441/810 (54%), Positives = 557/810 (68%), Gaps = 28/810 (3%)

Query: 1   MAFHLLSLLFL--LLLPCL---TAAQSNGTISIGQQLTAAESTEPWL--SPSKDFALGFH 53
           MA  LL  LFL  +LLP       AQ+   I+IG   TA  ST PWL  SPS DFA GF 
Sbjct: 1   MASPLLPFLFLSMVLLPFQHINVMAQTKSNIAIGDSHTAGASTSPWLVSSPSGDFAFGFL 60

Query: 54  QL-DSKDLFLPAIWYYKIPSKTIVWYASAVNPAPRGSKLRLTANRGLVL-EDPEGREIWK 111
            L D+ D F+  IWY KI  KTIVW+A+   PAP+GSK+ LTA+ GLVL   P G ++WK
Sbjct: 61  PLEDTPDHFMLCIWYAKIQDKTIVWFANRDKPAPKGSKVVLTADDGLVLITAPNGNQLWK 120

Query: 112 SEISTGQAAFGVLYDTGNFLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSSRRKDTY 171
           +   T + + GVL +TGNF++ + +S  +W+SF    DTLLP QTMERG  +SS+ +  Y
Sbjct: 121 TGGLTVRVSSGVLNNTGNFVLQDGDSNTVWESFKDYRDTLLPYQTMERGQKLSSKLRRNY 180

Query: 172 FSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWSNTFDTNRSNAGYRVVFNESGQLYVL 231
           F++GRF      DGN V+++INL SG+A + Y+ S T ++N S+AG ++VF+ SG +YVL
Sbjct: 181 FNKGRFVLFFQNDGNLVMHSINLPSGYANEHYYESGTVESNISSAGTQLVFDGSGDMYVL 240

Query: 232 RENKQRASLVPETVSAKEN----YLRATLNFDGVFIFYSHPKNNSTGDAIWSVSDVLPEN 287
           REN ++ +L      A       YLRATL+FDGVF  Y HPK  S+G   W+     P+N
Sbjct: 241 RENNEKYNLSRGGSGASSTTQFFYLRATLDFDGVFTLYQHPKG-SSGTGGWTPVWSHPDN 299

Query: 288 ICINNDIRKGLGSGICGFNSICSISGAKRPICQCPKGFSLLDPDDAYGSCKPDFILGCEE 347
           IC   D     GSG+CG+NSICS+   KRP C+CPK +SL+DP+D  GSCKPDF+  C  
Sbjct: 300 IC--KDYVASAGSGVCGYNSICSLRDDKRPNCKCPKWYSLVDPNDPNGSCKPDFVQACAV 357

Query: 348 DGKKSGEDLYYIEELRNTDWPTSDYEQISPYGKDECVSSCLKDCQCSAAVLR-DDTCWKK 406
           D   + +DLY  E L +TDWP SDY    P+ +++C  SC++DC CS A+ R  D+CWKK
Sbjct: 358 DELSNRKDLYDFEVLIDTDWPQSDYVLQRPFNEEQCRQSCMEDCMCSVAIFRLGDSCWKK 417

Query: 407 KLPLSYGKTDRDETGT-TFIKIRK------VPSG-GKKKVDVLIPVVSVLFGSSALINLL 458
           KLPLS G+ D    G   F+K+RK      VP+    K  +  I V SVL GSSA +NL+
Sbjct: 418 KLPLSNGRVDATLNGAKAFMKVRKDNSSLIVPTIIVNKNRNTSILVGSVLLGSSAFLNLI 477

Query: 459 LVSACCLGFLVVNR-KKFMRPHQEDQGVSYMNLRCFTYKELVEVTRGFKEELGRGAFGTV 517
           L+ A CL    V R KK +R       +   NLRCFTYKEL + T GF + LG+GAFG V
Sbjct: 478 LLGAICLSTSYVFRYKKKLRSIGRSDTIVETNLRCFTYKELEKATDGFDKVLGKGAFGIV 537

Query: 518 YKGFVNMGSSNHVAVKKLNS-VFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLL 576
           Y+G +NMGS   VAVK+LN+ + +D  KEFK E+N IG THHKNLVR+LG+C+  + RLL
Sbjct: 538 YEGVINMGSDTRVAVKRLNTFLLEDVHKEFKNELNAIGLTHHKNLVRILGFCETEEKRLL 597

Query: 577 VYEFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILL 635
           VYE+MSNGT+AS LF    KP+W+LR +IA+G+A GL YLHEEC TQIIHCDIKPQNILL
Sbjct: 598 VYEYMSNGTLASLLFNILEKPSWELRLQIAIGVARGLLYLHEECSTQIIHCDIKPQNILL 657

Query: 636 DDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLE 695
           DD+YNARISDFGLAKLL ++QS TNTAIRGTKGYVA EWF+NMPIT KVDVYSYGVLLLE
Sbjct: 658 DDYYNARISDFGLAKLLNMNQSRTNTAIRGTKGYVALEWFKNMPITAKVDVYSYGVLLLE 717

Query: 696 IICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWC 755
           I+  R++++ E    +KAIL +WAYD Y ERTL ALVE D EA++++  L + VM+A WC
Sbjct: 718 IVSCRKSVEFETEDKEKAILAEWAYDCYTERTLHALVEGDKEALDDMKNLEKLVMIALWC 777

Query: 756 IQEDPSHRPTMRKVTQMLEGVVEVPIPPCP 785
           +QEDP  RPTMR VTQMLEGVVEV +PPCP
Sbjct: 778 VQEDPDLRPTMRNVTQMLEGVVEVKVPPCP 807

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	792
TAIR|locus:2026155	829	AT1G34300 [Arabidopsis thalian	0.835	0.798	0.359	5e-99
TAIR|locus:2116525	821	SD2-5 "S-domain-2 5" [Arabidop	0.897	0.866	0.335	2.5e-90
TAIR|locus:2059103	828	AT2G19130 [Arabidopsis thalian	0.887	0.849	0.331	3.3e-86
TAIR|locus:2141176	849	B120 [Arabidopsis thaliana (ta	0.366	0.341	0.403	9.2e-73
TAIR|locus:2197649	821	AT1G61360 [Arabidopsis thalian	0.604	0.583	0.315	3.7e-72
TAIR|locus:2197734	814	AT1G61370 [Arabidopsis thalian	0.590	0.574	0.309	2.3e-70
TAIR|locus:2197714	792	AT1G61440 [Arabidopsis thalian	0.609	0.609	0.319	8.6e-67
TAIR|locus:2200908	842	AT1G61610 [Arabidopsis thalian	0.377	0.355	0.389	4.7e-66
TAIR|locus:2197729	805	SD1-29 "S-domain-1 29" [Arabid	0.608	0.598	0.314	5.2e-66
TAIR|locus:2200923	802	AT1G61550 [Arabidopsis thalian	0.597	0.589	0.319	7.3e-64

TAIR|locus:2026155 AT1G34300 [Arabidopsis thaliana (taxid:3702)]

 Score = 983 (351.1 bits), Expect = 5.0e-99, P = 5.0e-99
 Identities = 265/737 (35%), Positives = 378/737 (51%)

Query:    87 RGSKLRLTANRGLVLEDPEGREIWKSEISTGQAAFGVLYDTGNFLIVNTNSERLWQSFDH 146
             RGS LRL  +  L L +  G  +W S+        G + DTG F+++N  S  +W SFD+
Sbjct:    83 RGS-LRLHTSGSLRLTNGSGTTVWDSKTDRLGVTSGSIEDTGEFILLNNRSVPVWSSFDN 141

Query:   147 PTDTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWS 206
             PTDT++ +Q    G ++ S         G + F+L   GN    T+   +   Y  +  +
Sbjct:   142 PTDTIVQSQNFTAGKILRS---------GLYSFQLERSGNL---TLRWNTSAIYWNHGLN 189

Query:   207 NTFDTNRSNAGYRVVFNESGQLYVLRENKQR-ASLVPETVSAKENYLR-ATLNFDGVFIF 264
             ++F +N S+   R+    +G + +   N    A +V        N  R   L+ DG    
Sbjct:   190 SSFSSNLSSP--RLSLQTNGVVSIFESNLLGGAEIVYSGDYGDSNTFRFLKLDDDGNLRI 247

Query:   265 YSHPKNNSTG-DAIWSVSDVLPENICINNDIRKGLGSGICGFNSICSISGAKRPICQCP- 322
             YS    NS   +A WS  D      C        L  G CG   ICS +    PIC CP 
Sbjct:   248 YSSASRNSGPVNAHWSAVDQ-----C--------LVYGYCGNFGICSYNDTN-PICSCPS 293

Query:   323 KGFSLLDPDDAYGSCKPDFILGCEEDGKKSGEDLYYIEELRNTDWPTSDYEQISPYGKDE 382
             + F  +D +D    CK    L  +  G  +  DL +       D P S  E     G   
Sbjct:   294 RNFDFVDVNDRRKGCKRKVELS-DCSGNTTMLDLVHTRLFTYEDDPNS--ESFFA-GSSP 349

Query:   383 CVSSCLKDCQCSAAVLRDD---TCWKKKLPLSY--GKTDRDETGTTFIKI---------R 428
             C ++CL    C A+V   D    CW+K  P S+  G        T+++K+          
Sbjct:   350 CRANCLSSVLCLASVSMSDGSGNCWQKH-PGSFFTGYQWPSVPSTSYVKVCGPVVANTLE 408

Query:   429 KVPSG--GKKKVDVLIPVVSVLFGSSALI--NLLLVSACCLG---FLVVNRKKFMRPHQE 481
             +   G     KV + I  V+V+ G   L+   + L   CC     F  ++    +  +  
Sbjct:   409 RATKGDDNNSKVHLWIVAVAVIAGLLGLVAVEIGLWWCCCRKNPRFGTLSSHYTLLEYAS 468

Query:   482 DQGVSYMNLRCFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD 541
                V       FTYKEL   T+ FKE+LG G FGTVY+G +   +   VAVK+L  + Q 
Sbjct:   469 GAPVQ------FTYKELQRCTKSFKEKLGAGGFGTVYRGVLT--NRTVVAVKQLEGIEQ- 519

Query:   542 SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFG-DSKP--NW 598
              EK+F+ EV  I  THH NLVRL+G+C +G++RLLVYEFM NG++ +FLF  DS     W
Sbjct:   520 GEKQFRMEVATISSTHHLNLVRLIGFCSQGRHRLLVYEFMRNGSLDNFLFTTDSAKFLTW 579

Query:   599 KLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT-LDQS 657
             + R  IA+G A G+ YLHEEC   I+HCDIKP+NIL+DD++ A++SDFGLAKLL   D  
Sbjct:   580 EYRFNIALGTAKGITYLHEECRDCIVHCDIKPENILVDDNFAAKVSDFGLAKLLNPKDNR 639

Query:   658 HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTD 717
             +  +++RGT+GY+APEW  N+PIT K DVYSYG++LLE++  +RN D    K +    + 
Sbjct:   640 YNMSSVRGTRGYLAPEWLANLPITSKSDVYSYGMVLLELVSGKRNFDVS-EKTNHKKFSI 698

Query:   718 WAYDRYQERTLEALVENDLEAMNNVTM--LHRFVMVAFWCIQEDPSHRPTMRKVTQMLEG 775
             WAY+ +++   +A+++  L     V M  + R V  +FWCIQE P  RPTM KV QMLEG
Sbjct:   699 WAYEEFEKGNTKAILDTRLSEDQTVDMEQVMRMVKTSFWCIQEQPLQRPTMGKVVQMLEG 758

Query:   776 VVEVPIPPCPWTLNITS 792
             + E+  P CP T++  S
Sbjct:   759 ITEIKNPLCPKTISEVS 775

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0006487 "protein N-linked glycosylation" evidence=RCA

TAIR|locus:2116525 SD2-5 "S-domain-2 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 901 (322.2 bits), Expect = 2.5e-90, P = 2.5e-90
 Identities = 266/794 (33%), Positives = 404/794 (50%)

Query:    29 GQQLTAAESTEPWLSPSKDFALGFHQLDSKD-LFLPAIWYYKIPSKTIVWYASAVNPAPR 87
             G Q+    +   +L  S + A GF  + ++D + L  +      S  ++W A+  +P   
Sbjct:    35 GSQMNYINNDGIFLE-SNNSAFGFGFVTTQDSVTLFTLSIIHKSSTKLIWSANRASPVSN 93

Query:    88 GSKLRLTANRGLVLEDPEGREIWKSEISTGQAAFGVLYDTGNFLIVNTNSERLWQSFDHP 147
               K     N  +V+E   G E+W+ + S   A+   L D+GN ++V+ +   +W+SFDHP
Sbjct:    94 SDKFVFDDNGNVVME---GTEVWRLDNSGKNASRIELRDSGNLVVVSVDGTSIWESFDHP 150

Query:   148 TDTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRL-LEDGNAVLNTINLESGFAYDAYFWS 206
             TDTL+  Q  + G  ++S       S     + L ++ G+ VL+  +L         +WS
Sbjct:   151 TDTLITNQAFKEGMKLTSSP-----SSSNMTYALEIKSGDMVLSVNSLTP-----QVYWS 200

Query:   207 NTFDTNRS-NAGYRVVFNES--GQLYVLRENKQRASLVPETVSA--KENYLR--ATLNFD 259
                   R  N    VV + S  G  +   + KQ   L+ + V +  K++     A L  +
Sbjct:   201 MANARERIINKDGGVVTSSSLLGNSWRFFDQKQ--VLLWQFVFSDNKDDNTTWIAVLGNN 258

Query:   260 GVFIFYSHPKNNSTGDAIWSVSDVLPENICINNDIRKGLGSGICGFNSICSISGAKRPIC 319
             GV  F +     S  D+    S  +P ++C       G     CG   +CS  G+K  +C
Sbjct:   259 GVISFSNLGSGASAADS----STKIPSDLC-------GTPEP-CGPYYVCS--GSK--VC 302

Query:   320 QCPKGFSLLDPDDAYGSCKPDFILGCEEDGKKSGEDLYYIEELRNTDWPTSDYEQISPYG 379
              C  G S    D     CK      C++    +   L  +      D+    Y    P+ 
Sbjct:   303 GCVSGLSRARSD-----CKTGITSPCKKTKDNATLPLQLVSAGDGVDYFALGYAP--PFS 355

Query:   380 K----DECVSSCLKDCQCSAAVLRDDT--CWKKKLPLSYGKTDRDETG-TTFIKIRKVPS 432
             K    D C   C  +C C     ++ +  C+      S+  +    +G  ++IKI    S
Sbjct:   356 KKTDLDSCKEFCHNNCSCLGLFFQNSSGNCFLFDYIGSFKTSGNGGSGFVSYIKIASTGS 415

Query:   433 GGKKKVD---VLIPVVSVLFGSSALINLLLVSACCLGFLVVNRKKFM--RPHQ---ED-- 482
             GG    +      P V ++   +  I  +L+    + F +  RKK +   P +   ED  
Sbjct:   416 GGGDNGEDDGKHFPYVVIIVVVTVFIIAVLIF---VAFRIHKRKKMILEAPQESSEEDNF 472

Query:   483 -QGVSYMNLRCFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD 541
              + +S M +R F YK+L   T  F  +LG+G FG+VY+G +  GS   +AVKKL  + Q 
Sbjct:   473 LENLSGMPIR-FAYKDLQSATNNFSVKLGQGGFGSVYEGTLPDGS--RLAVKKLEGIGQ- 528

Query:   542 SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLF----GDSKPN 597
              +KEF+AEV+ IG  HH +LVRL G+C EG +RLL YEF+S G++  ++F    GD   +
Sbjct:   529 GKKEFRAEVSIIGSIHHLHLVRLRGFCAEGAHRLLAYEFLSKGSLERWIFRKKDGDVLLD 588

Query:   598 WKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS 657
             W  R  IA+G A GL YLHE+C  +I+HCDIKP+NILLDD++NA++SDFGLAKL+T +QS
Sbjct:   589 WDTRFNIALGTAKGLAYLHEDCDARIVHCDIKPENILLDDNFNAKVSDFGLAKLMTREQS 648

Query:   658 HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNID-NEISKVDKAILT 716
             H  T +RGT+GY+APEW  N  I+ K DVYSYG++LLE+I  R+N D +E S  +K    
Sbjct:   649 HVFTTMRGTRGYLAPEWITNYAISEKSDVYSYGMVLLELIGGRKNYDPSETS--EKCHFP 706

Query:   717 DWAYDRYQERTLEALVENDLEAMNNVT--MLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
              +A+ + +E  L  +V+  ++ ++ VT   + R +  A WCIQED   RP+M KV QMLE
Sbjct:   707 SFAFKKMEEGKLMDIVDGKMKNVD-VTDERVQRAMKTALWCIQEDMQTRPSMSKVVQMLE 765

Query:   775 GVVEVPIPPCPWTL 788
             GV  V  PP   T+
Sbjct:   766 GVFPVVQPPSSSTM 779

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0046777 "protein autophosphorylation" evidence=RCA;IDA

TAIR|locus:2059103 AT2G19130 [Arabidopsis thaliana (taxid:3702)]

 Score = 862 (308.5 bits), Expect = 3.3e-86, P = 3.3e-86
 Identities = 259/781 (33%), Positives = 389/781 (49%)

Query:    42 LSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAVNP-APRGSKLRLTANRGLV 100
             +S    + +GF +  S   F   +WY ++ S+TI+W A+     + + S +   +N  L+
Sbjct:    39 VSSDGTYEMGFFKPGSSSNFYIGMWYKQL-SQTILWVANRDKAVSDKNSSVFKISNGNLI 97

Query:   101 LEDPEGRE-IWKSEI-STGQ--AAFGVLYDTGNFLIVNTNSERL-----WQSFDHPTDTL 151
             L D   +  +W + + ST    A   VL D GN L++ T    L     WQSFDHP DT 
Sbjct:    98 LLDGNYQTPVWSTGLNSTSSVSALEAVLQDDGN-LVLRTGGSSLSANVLWQSFDHPGDTW 156

Query:   152 LPTQTMERGGVVSSRRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFW--SNTF 209
             LP       GV     K T  S+    ++ LED +  L ++ L+   AY    W  SN +
Sbjct:   157 LP-------GVKIRLDKRTGKSQRLTSWKSLEDPSPGLFSLELDESTAYKI-LWNGSNEY 208

Query:   210 -DTNRSNAGYRVVFNESGQL---YVLREN---KQRASLVPETVSAKENYLRATLNFDGVF 262
               +   N   R+ F+   ++   Y+   +       S    ++  + N  R  ++  G  
Sbjct:   209 WSSGPWNPQSRI-FDSVPEMRLNYIYNFSFFSNTTDSYFTYSIYNQLNVSRFVMDVSGQI 267

Query:   263 IFYSHPKNNSTGDAIWSVSDVLPENICINNDIRKGLGSGICGFNSICSISGAKRPICQCP 322
               ++  + N   +  WS     P   C    + +      CG   ICS      P C+CP
Sbjct:   268 KQFTWLEGNKAWNLFWSQ----PRQQC---QVYR-----YCGSFGICS--DKSEPFCRCP 313

Query:   323 KGFSLLDPDDAYGSCKPDFILGC--EEDGKKSGEDLYYIEELRNTDWPTSDYEQISPYGK 380
             +GF  +   D     K D+  GC  + + + S  D+     L N     +  E ++    
Sbjct:   314 QGFRPMSQKD--WDLK-DYSAGCVRKTELQCSRGDINQFFRLPNMKLADNS-EVLTRTSL 369

Query:   381 DECVSSCLKDCQCSAAVLRDDT--C--WKKK-LPLSYGKTDRDETGTTFIKIRK--VPS- 432
               C S+C  DC C A    + +  C  W K  L L   + +  E    ++++    VP+ 
Sbjct:   370 SICASACQGDCSCKAYAYDEGSSKCLVWSKDVLNLQQLEDENSEGNIFYLRLAASDVPNV 429

Query:   433 GGKKKVDVLIPVVSVLFGSSALINLLLVSACCLGFLVVNRKKFMRPHQEDQGVSYMNLRC 492
             G   K +    +   + GS  +I L+L+    +  L   R+K MR  + D G     L  
Sbjct:   430 GASGKSNNKGLIFGAVLGSLGVIVLVLLVVILI--LRYRRRKRMRGEKGD-GT----LSA 482

Query:   493 FTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG 552
             F+Y+EL   T+ F ++LG G FG+V+KG   +  S+ +AVK+L  + Q  EK+F+ EV  
Sbjct:   483 FSYRELQNATKNFSDKLGGGGFGSVFKGA--LPDSSDIAVKRLEGISQ-GEKQFRTEVVT 539

Query:   553 IGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPN-----WKLRTEIAMG 607
             IG   H NLVRL G+C EG  +LLVY++M NG++ S LF +         WKLR +IA+G
Sbjct:   540 IGTIQHVNLVRLRGFCSEGSKKLLVYDYMPNGSLDSHLFLNQVEEKIVLGWKLRFQIALG 599

Query:   608 IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK 667
              A GL YLH+EC   IIHCDIKP+NILLD  +  +++DFGLAKL+  D S   T +RGT+
Sbjct:   600 TARGLAYLHDECRDCIIHCDIKPENILLDSQFCPKVADFGLAKLVGRDFSRVLTTMRGTR 659

Query:   668 GYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNID-NEISKVDKAILTDWAYDRY-QE 725
             GY+APEW   + IT K DVYSYG++L E++  RRN + +E  KV       WA     ++
Sbjct:   660 GYLAPEWISGVAITAKADVYSYGMMLFELVSGRRNTEQSENEKV--RFFPSWAATILTKD 717

Query:   726 RTLEALVENDLEA-MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPIPPC 784
               + +LV+  LE    ++  + R   VA WCIQ++ SHRP M +V Q+LEGV+EV  PP 
Sbjct:   718 GDIRSLVDPRLEGDAVDIEEVTRACKVACWCIQDEESHRPAMSQVVQILEGVLEVNPPPF 777

Query:   785 P 785
             P
Sbjct:   778 P 778

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2141176 B120 [Arabidopsis thaliana (taxid:3702)]

 Score = 511 (184.9 bits), Expect = 9.2e-73, Sum P(3) = 9.2e-73
 Identities = 121/300 (40%), Positives = 170/300 (56%)

Query:   481 EDQGVSYMNLRCFTYKELVEVTRGF-KE-ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV 538
             E + V+   L  F+   +   T  F KE ELGRG FG VYKG +  G    +AVK+L+  
Sbjct:   505 EGKAVNTSELPVFSLNAIAIATNDFCKENELGRGGFGPVYKGVLEDG--REIAVKRLSGK 562

Query:   539 FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP-- 596
                   EFK E+  I +  H+NLVRLLG C EG+ ++LVYE+M N ++  FLF ++K   
Sbjct:   563 SGQGVDEFKNEIILIAKLQHRNLVRLLGCCFEGEEKMLVYEYMPNKSLDFFLFDETKQAL 622

Query:   597 -NWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD 655
              +WKLR  I  GIA GL YLH +   +IIH D+K  N+LLD   N +ISDFG+A++   +
Sbjct:   623 IDWKLRFSIIEGIARGLLYLHRDSRLRIIHRDLKVSNVLLDAEMNPKISDFGMARIFGGN 682

Query:   656 QSHTNTA-IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAI 714
             Q+  NT  + GT GY++PE+      +VK DVYS+GVLLLEI+  +RN    +   +   
Sbjct:   683 QNEANTVRVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIVSGKRN--TSLRSSEHGS 740

Query:   715 LTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
             L  +A+  Y     E LV+  +    +     R + VA  C+Q+  + RP M  V  MLE
Sbjct:   741 LIGYAWYLYTHGRSEELVDPKIRVTCSKREALRCIHVAMLCVQDSAAERPNMASVLLMLE 800

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0006979 "response to oxidative stress" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2197649 AT1G61360 [Arabidopsis thaliana (taxid:3702)]

 Score = 581 (209.6 bits), Expect = 3.7e-72, Sum P(2) = 3.7e-72
 Identities = 164/520 (31%), Positives = 262/520 (50%)

Query:   301 GICGFNSICSISGAKRPICQCPKGFS-LLDPDDAYGS----CKPDFILGCEEDG--KKSG 353
             G CG   +C  SG   P+CQC KGF    D +   G+    C     L C+ +   +  G
Sbjct:   284 GRCGPFGLCVRSGT--PMCQCLKGFEPKSDEEWRSGNWSRGCVRRTNLSCQGNSSVETQG 341

Query:   354 ED---LYYIEELRNTDWPTSDYEQISPYGKDECVSSCLKDCQCSA-AVLRDDTC--WKKK 407
             +D    Y++  ++    P   YE  S   +++C   CL++C C+A + +    C  W ++
Sbjct:   342 KDRDVFYHVSNIK----PPDSYELASFSNEEQCHQGCLRNCSCTAFSYVSGIGCLVWNQE 397

Query:   408 LPLSYGKTDRDETGTTFIKIRKVPSGGKKKVDVLIPVVSVLFGSSALINLLLVSACCL-- 465
             L  +       ET +  +++      G+K++ ++   V+ L  S  LI +L+   C    
Sbjct:   398 LLDTVKFIGGGETLS--LRLAHSELTGRKRIKII--TVATLSLSVCLILVLVACGCWRYR 453

Query:   466 ----GFLVVNRKKFMRPHQED-QGVSYMNLRCFTYKELVEVTRGFK--EELGRGAFGTVY 518
                 G  +V++       + D Q      L  F   +L   T  F    +LG+G FGTVY
Sbjct:   454 VKQNGSSLVSKDNVEGAWKSDLQSQDVSGLNFFEIHDLQTATNNFSVLNKLGQGGFGTVY 513

Query:   519 KGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVY 578
             KG +  G    +AVK+L S      +EF  E+  I +  H+NL+RLLG C +G+ +LLVY
Sbjct:   514 KGKLQDGKE--IAVKRLTSSSVQGTEEFMNEIKLISKLQHRNLLRLLGCCIDGEEKLLVY 571

Query:   579 EFMSNGTVASFLFGDSKP---NWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILL 635
             E+M N ++  F+F   K    +W  R  I  GIA GL YLH +   +++H D+K  NILL
Sbjct:   572 EYMVNKSLDIFIFDLKKKLEIDWATRFNIIQGIARGLLYLHRDSFLRVVHRDLKVSNILL 631

Query:   636 DDHYNARISDFGLAKLLTLDQSHTNT-AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLL 694
             D+  N +ISDFGLA+L   +Q   +T ++ GT GY++PE+      + K D+YS+GVL+L
Sbjct:   632 DEKMNPKISDFGLARLFHGNQHQDSTGSVVGTLGYMSPEYAWTGTFSEKSDIYSFGVLML 691

Query:   695 EIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLH--RFVMVA 752
             EII  +        K +K +L+ +A+D + E     L++ DL+  ++V  +   R V + 
Sbjct:   692 EIITGKEISSFSYGKDNKNLLS-YAWDSWSENGGVNLLDQDLDDSDSVNSVEAGRCVHIG 750

Query:   753 FWCIQEDPSHRPTMRKVTQMLEGVVEVPIPPCPWTLNITS 792
               C+Q     RP +++V  ML    ++P P  P  +  TS
Sbjct:   751 LLCVQHQAIDRPNIKQVMSMLTSTTDLPKPTQPMFVLETS 790

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

TAIR|locus:2197734 AT1G61370 [Arabidopsis thaliana (taxid:3702)]

 Score = 584 (210.6 bits), Expect = 2.3e-70, Sum P(2) = 2.3e-70
 Identities = 157/508 (30%), Positives = 257/508 (50%)

Query:   303 CGFNSICSISGAKRPICQCPKGFSLLDPDDAY------GSCKPDFILGCEEDGKKSGE-- 354
             CG   +C  S    P C+C KGF +   D+ +      G C     L C+ +   + +  
Sbjct:   292 CGPFGLCIRSNP--PKCECLKGF-VPKSDEEWNKRNWTGGCMRRTNLSCDVNSSATAQAN 348

Query:   355 --DLYYIEELRNTDWPTSDYEQISPYGKDECVSSCLKDCQCSA-AVLRDDTC--WKKKLP 409
               D++ I  + N   P   YE +S   +++C   CL +C C+A + +    C  W ++L 
Sbjct:   349 NGDIFDI--VANVK-PPDFYEYLSLINEEDCQQRCLGNCSCTAFSYIEQIGCLVWNRELV 405

Query:   410 LSYGKTDRDETGTTFIKIRKVPSGGKKKVDVLIP-VVSVLFGSSALINLLLVSACCLGFL 468
                      ET +  I++      G  +V +++  +VS+    S  + L+  S     + 
Sbjct:   406 DVMQFVAGGETLS--IRLASSELAGSNRVKIIVASIVSI----SVFMILVFASYWYWRYK 459

Query:   469 VVNRKKFMRPHQEDQG-----VSYMNLRCFTYKELVEVTRGFKEE--LGRGAFGTVYKGF 521
                      P +  Q      +   ++  F  + ++ +T  F  E  LG+G FG VYKG 
Sbjct:   460 AKQNDSNPIPLETSQDAWREQLKPQDVNFFDMQTILTITNNFSMENKLGQGGFGPVYKG- 518

Query:   522 VNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM 581
              N+     +A+K+L+S      +EF  E+  I +  H+NLVRLLG C EG+ +LL+YEFM
Sbjct:   519 -NLQDGKEIAIKRLSSTSGQGLEEFMNEIILISKLQHRNLVRLLGCCIEGEEKLLIYEFM 577

Query:   582 SNGTVASFLFGDSKP---NWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH 638
             +N ++ +F+F  +K    +W  R EI  GIA GL YLH + C +++H D+K  NILLD+ 
Sbjct:   578 ANKSLNTFIFDSTKKLELDWPKRFEIIQGIACGLLYLHRDSCLRVVHRDMKVSNILLDEE 637

Query:   639 YNARISDFGLAKLLTLDQSHTNTA-IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEII 697
              N +ISDFGLA++    Q   NT  + GT GY++PE+      + K D+Y++GVLLLEII
Sbjct:   638 MNPKISDFGLARMFQGTQHQANTRRVVGTLGYMSPEYAWTGMFSEKSDIYAFGVLLLEII 697

Query:   698 CLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQ 757
               +R     I +  K +L ++A+D + E     L++ D+ +  + + + R V +   CIQ
Sbjct:   698 TGKRISSFTIGEEGKTLL-EFAWDSWCESGGSDLLDQDISSSGSESEVARCVQIGLLCIQ 756

Query:   758 EDPSHRPTMRKVTQMLEGVVEVPIPPCP 785
             +    RP + +V  ML   +++P P  P
Sbjct:   757 QQAGDRPNIAQVMSMLTTTMDLPKPKQP 784

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2197714 AT1G61440 [Arabidopsis thaliana (taxid:3702)]

 Score = 566 (204.3 bits), Expect = 8.6e-67, Sum P(2) = 8.6e-67
 Identities = 167/523 (31%), Positives = 252/523 (48%)

Query:   278 WSVSDVLPENICINNDIRKGLGSGICGFNSICSISGAKRPICQCPKGFSLLDPDD-AYGS 336
             W  S   P N C   DI      G+CG    C IS    P C+C KGF     ++   G+
Sbjct:   264 WKSSYEGPANSC---DIY-----GVCGPFGFCVISDP--PKCKCFKGFVPKSIEEWKRGN 313

Query:   337 ----CKPDFILGCEEDGKKSGEDLYYIEELRNTDWPTSDYEQISPYGKDECVSSCLKDCQ 392
                 C     L C+  G  +G+D      + N   P   YE  +    + C  SCL +C 
Sbjct:   314 WTSGCARRTELHCQ--GNSTGKDANVFHTVPNIK-PPDFYEYANSVDAEGCYQSCLHNCS 370

Query:   393 CSA-AVLRDDTC--WKKKLPLSYGKTDRDETGTTFIKIRKVPSGGKKKVDVLIPVVSVLF 449
             C A A +    C  W K L      T +   G   + IR   S    ++DV    ++++ 
Sbjct:   371 CLAFAYIPGIGCLMWSKDLM----DTMQFSAGGEILSIRLAHS----ELDVHKRKMTIVA 422

Query:   450 GSSALINLLLVSACCLGFLVVNRKKFMRPHQED-QGVSYMNLRCFTYKELVEVTRGFK-- 506
              + +L   +++     GF   NR K     + D Q      L  F    +   T  F   
Sbjct:   423 STVSLTLFVILGFATFGFWR-NRVKHHDAWRNDLQSQDVPGLEFFEMNTIQTATSNFSLS 481

Query:   507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
              +LG G FG+VYKG +  G    +AVK+L+S  +  ++EF  E+  I +  H+NLVR+LG
Sbjct:   482 NKLGHGGFGSVYKGKLQDG--REIAVKRLSSSSEQGKQEFMNEIVLISKLQHRNLVRVLG 539

Query:   567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKP---NWKLRTEIAMGIAGGLFYLHEECCTQI 623
              C EG+ +LL+YEFM N ++ +F+FG  K    +W  R +I  GI  GL YLH +   ++
Sbjct:   540 CCVEGKEKLLIYEFMKNKSLDTFVFGSRKRLELDWPKRFDIIQGIVRGLLYLHRDSRLRV 599

Query:   624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA-IRGTKGYVAPEWFRNMPITV 682
             IH D+K  NILLD+  N +ISDFGLA+L    Q    T  + GT GY++PE+      + 
Sbjct:   600 IHRDLKVSNILLDEKMNPKISDFGLARLFQGSQYQDKTRRVVGTLGYMSPEYAWTGVFSE 659

Query:   683 KVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV 742
             K D+YS+GVLLLEII   +       +  KA+L  + ++ + E     L++  L+  ++ 
Sbjct:   660 KSDIYSFGVLLLEIISGEKISRFSYGEEGKALLA-YVWECWCETRGVNLLDQALDDSSHP 718

Query:   743 TMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPIPPCP 785
               + R V +   C+Q  P+ RP   ++  ML    ++P+P  P
Sbjct:   719 AEVGRCVQIGLLCVQHQPADRPNTLELLSMLTTTSDLPLPKQP 761

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

TAIR|locus:2200908 AT1G61610 [Arabidopsis thaliana (taxid:3702)]

 Score = 524 (189.5 bits), Expect = 4.7e-66, Sum P(3) = 4.7e-66
 Identities = 121/311 (38%), Positives = 175/311 (56%)

Query:   482 DQGVSYMNLRCFTYKELVEVTRGFKEE--LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF 539
             DQ V   +L  F++  +   T  F EE  LG+G FGTVYKG  N      +AVK+L+   
Sbjct:   503 DQ-VDTPDLPIFSFDSVASATGDFAEENKLGQGGFGTVYKG--NFSEGREIAVKRLSGKS 559

Query:   540 QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP--- 596
             +   +EFK E+  I +  H+NLVRLLG C E   ++L+YE+M N ++  FLF +SK    
Sbjct:   560 KQGLEEFKNEILLIAKLQHRNLVRLLGCCIEDNEKMLLYEYMPNKSLDRFLFDESKQGSL 619

Query:   597 NWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ 656
             +W+ R E+  GIA GL YLH +   +IIH D+K  NILLD   N +ISDFG+A++    Q
Sbjct:   620 DWRKRWEVIGGIARGLLYLHRDSRLKIIHRDLKASNILLDTEMNPKISDFGMARIFNYRQ 679

Query:   657 SHTNTA-IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAIL 715
              H NT  + GT GY+APE+      + K DVYS+GVL+LEI+  R+N+       D   L
Sbjct:   680 DHANTIRVVGTYGYMAPEYAMEGIFSEKSDVYSFGVLILEIVSGRKNVS--FRGTDHGSL 737

Query:   716 TDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEG 775
               +A+  + +   + +++  ++   +VT   R + V   C Q+   HRP M  V  MLE 
Sbjct:   738 IGYAWHLWSQGKTKEMIDPIVKDTRDVTEAMRCIHVGMLCTQDSVIHRPNMGSVLLMLES 797

Query:   776 VV-EVPIPPCP 785
                ++P P  P
Sbjct:   798 QTSQLPPPRQP 808

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

TAIR|locus:2197729 SD1-29 "S-domain-1 29" [Arabidopsis thaliana (taxid:3702)]

 Score = 555 (200.4 bits), Expect = 5.2e-66, Sum P(2) = 5.2e-66
 Identities = 166/528 (31%), Positives = 249/528 (47%)

Query:   278 WSVSDVLPENICINNDIRKGLGSGICGFNSICSISGAKRPICQCPKGFSLLDPDDAYGS- 336
             W +   LPEN C   D+      G CG   +C  S    P C+C KGF +   D+ +G  
Sbjct:   270 WKLHLSLPENPC---DLY-----GRCGPYGLCVRSDP--PKCECLKGF-VPKSDEEWGKG 318

Query:   337 -----CKPDFILGCEEDG--KKSGED--LYYIEELRNTDWPTSDYEQISPY-GKDECVSS 386
                  C     L C+     K  G+D  ++Y    R TD  T D  Q + +   ++C   
Sbjct:   319 NWTSGCVRRTKLSCQAKSSMKTQGKDTDIFY----RMTDVKTPDLHQFASFLNAEQCYQG 374

Query:   387 CLKDCQCSA-AVLRDDTC--WKKKLPLSYGKTDRDETGTTFIKIRKVPSGGKKKVDVLIP 443
             CL +C C+A A +    C  W  +L  +       E    FI++      G  +  +++ 
Sbjct:   375 CLGNCSCTAFAYISGIGCLVWNGELADTVQFLSSGEF--LFIRLASSELAGSSRRKIIVG 432

Query:   444 VVSVLFGSSALINLLLVSACCLGFLVVNRKKFMRPHQEDQGVSYMNLRCFTYKELVEVTR 503
                 L    ++  +L+ +A  L      +    +   E Q VS +N   F    +   T 
Sbjct:   433 TTVSL----SIFLILVFAAIMLWRYRAKQNDAWKNGFERQDVSGVNF--FEMHTIRTATN 486

Query:   504 GFK--EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
              F    +LG+G FG VYKG   +     + VK+L S      +EF  E+  I +  H+NL
Sbjct:   487 NFSPSNKLGQGGFGPVYKG--KLVDGKEIGVKRLASSSGQGTEEFMNEITLISKLQHRNL 544

Query:   562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDS---KPNWKLRTEIAMGIAGGLFYLHEE 618
             VRLLGYC +G+ +LL+YEFM N ++  F+F      + +W  R  I  GIA GL YLH +
Sbjct:   545 VRLLGYCIDGEEKLLIYEFMVNKSLDIFIFDPCLKFELDWPKRFNIIQGIARGLLYLHRD 604

Query:   619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA-IRGTKGYVAPEWFRN 677
                ++IH D+K  NILLDD  N +ISDFGLA++    Q   NT  + GT GY++PE+   
Sbjct:   605 SRLRVIHRDLKVSNILLDDRMNPKISDFGLARMFQGTQYQDNTRRVVGTLGYMSPEYAWA 664

Query:   678 MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLE 737
                + K D+YS+GVL+LEII  +R I   I   +   L  + +D + E     L++ DL 
Sbjct:   665 GLFSEKSDIYSFGVLMLEIISGKR-ISRFIYGDESKGLLAYTWDSWCETGGSNLLDRDLT 723

Query:   738 AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPIPPCP 785
                    + R V +   C+Q +   RP   +V  ML    ++P+P  P
Sbjct:   724 DTCQAFEVARCVQIGLLCVQHEAVDRPNTLQVLSMLTSATDLPVPKQP 771

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

GO:0031625 "ubiquitin protein ligase binding" evidence=IPI

GO:0046777 "protein autophosphorylation" evidence=RCA;IDA

TAIR|locus:2200923 AT1G61550 [Arabidopsis thaliana (taxid:3702)]

 Score = 546 (197.3 bits), Expect = 7.3e-64, Sum P(2) = 7.3e-64
 Identities = 161/504 (31%), Positives = 241/504 (47%)

Query:   301 GICGFNSICSISGAKRPICQCPKGFSLLDPDDAY-----GSCKPDFILGCEEDGKKSGED 355
             G+CG   +C +S    P C+C KGF     ++       G C     L C+  G  +G  
Sbjct:   281 GVCGPFGLCVMSIP--PKCKCFKGFVPQFSEEWKRGNWTGGCVRRTELLCQ--GNSTGRH 336

Query:   356 LYYIEELRNTDWPTSDYEQISPYGKDECVSSCLKDCQCSA-AVLRDDTC--WKKKLPLSY 412
             +     + N   P   YE +S    +EC  SCL +C C A A +    C  W ++L    
Sbjct:   337 VNVFHPVANIK-PPDFYEFVSSGSAEECYQSCLHNCSCLAFAYINGIGCLIWNQELM--- 392

Query:   413 GKTDRDETGTTFIKIRKVPS---GGKKKVDVLIPVVSV-LFGSSALINLLLVSACCLGFL 468
                 +   G   + IR   S   G ++K  ++  +VS+ LF + A               
Sbjct:   393 -DVMQFSVGGELLSIRLASSEMGGNQRKKTIIASIVSISLFVTLASAAFGFWRYRLKHNA 451

Query:   469 VVNRKKFMRPHQED-QGVSYMNLRCFTYKELVEVTRGFK--EELGRGAFGTVYKGFVNMG 525
             +V++       + D +      L  F  K +   T  F    +LG+G FG VYKG +  G
Sbjct:   452 IVSKVSLQGAWRNDLKSEDVSGLYFFEMKTIEIATNNFSLVNKLGQGGFGPVYKGKLQDG 511

Query:   526 SSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGT 585
                 +AVK+L+S     ++EF  E+  I +  H NLVR+LG C EG+ RLLVYEFM N +
Sbjct:   512 KE--IAVKRLSSSSGQGKEEFMNEILLISKLQHINLVRILGCCIEGEERLLVYEFMVNKS 569

Query:   586 VASFLFGDSKP---NWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNAR 642
             + +F+F   K    +W  R  I  GIA GL YLH +   +IIH D+K  NILLDD  N +
Sbjct:   570 LDTFIFDSRKRVEIDWPKRFSIIQGIARGLLYLHRDSRLRIIHRDVKVSNILLDDKMNPK 629

Query:   643 ISDFGLAKLLTLDQSHTNTA-IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRR 701
             ISDFGLA++    +   NT  I GT GY++PE+      + K D YS+GVLLLE+I   +
Sbjct:   630 ISDFGLARMYEGTKYQDNTRRIVGTLGYMSPEYAWTGVFSEKSDTYSFGVLLLEVISGEK 689

Query:   702 NIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPS 761
                    K  K +L  +A++ + E      ++ D     + + + R V +   C+Q  P+
Sbjct:   690 ISRFSYDKERKNLLA-YAWESWCENGGVGFLDKDATDSCHPSEVGRCVQIGLLCVQHQPA 748

Query:   762 HRPTMRKVTQMLEGVVEVPIPPCP 785
              RP   ++  ML    ++P+P  P
Sbjct:   749 DRPNTLELLSMLTTTSDLPLPKEP 772

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030246 "carbohydrate binding" evidence=IEA;ISS

GO:0048544 "recognition of pollen" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q39202	RLK1_ARATH	2, ., 7, ., 1, 1, ., 1	0.4660	0.9621	0.9158	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!
3rd Layer	2.7.11	0.921

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	792
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	4e-47
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	7e-46
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	7e-46
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	4e-44
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	9e-44
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	3e-43
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	1e-39
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-33
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	6e-33
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	1e-30
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	8e-29
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	9e-29
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	9e-29
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	8e-28
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	1e-26
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	2e-25
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	8e-25
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	1e-24
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	1e-24
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	6e-24
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	1e-23
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	1e-23
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	3e-23
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	6e-23
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	8e-23
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	9e-23
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	1e-22
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	2e-22
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	5e-22
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	6e-22
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	6e-22
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	1e-21
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	2e-21
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	2e-21
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	9e-21
pfam01453	109	pfam01453, B_lectin, D-mannose binding lectin	1e-20
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	1e-20
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	1e-20
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	1e-20
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	1e-20
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	2e-20
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	2e-20
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	3e-20
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	3e-20
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	4e-20
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	5e-20
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	7e-20
cd00028	116	cd00028, B_lectin, Bulb-type mannose-specific lect	8e-20
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	2e-19
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	2e-19
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	4e-19
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	5e-19
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	6e-19
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	6e-19
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	6e-19
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	8e-19
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	1e-18
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	2e-18
smart00108	114	smart00108, B_lectin, Bulb-type mannose-specific l	2e-18
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	3e-18
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	3e-18
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	4e-18
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	4e-18
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	4e-18
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	6e-18
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	7e-18
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	7e-18
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	9e-18
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	1e-17
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	1e-17
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	1e-17
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	2e-17
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	2e-17
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	2e-17
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	2e-17
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	3e-17
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	3e-17
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	4e-17
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	4e-17
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	4e-17
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	4e-17
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	5e-17
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	5e-17
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	6e-17
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	7e-17
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	8e-17
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	1e-16
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	1e-16
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	1e-16
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	1e-16
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	2e-16
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	3e-16
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	5e-16
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	5e-16
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	9e-16
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	9e-16
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	1e-15
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	2e-15
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	2e-15
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	2e-15
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	2e-15
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	2e-15
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	2e-15
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	2e-15
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	4e-15
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	4e-15
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	7e-15
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	8e-15
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	1e-14
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	1e-14
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	1e-14
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	1e-14
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	1e-14
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	2e-14
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	2e-14
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	2e-14
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	2e-14
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	3e-14
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	3e-14
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	4e-14
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	4e-14
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	4e-14
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	5e-14
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	5e-14
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	6e-14
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	7e-14
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	8e-14
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	1e-13
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	1e-13
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	2e-13
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	2e-13
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	2e-13
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	2e-13
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	2e-13
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	2e-13
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	2e-13
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	3e-13
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	3e-13
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	3e-13
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	3e-13
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	3e-13
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	4e-13
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	5e-13
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	7e-13
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	7e-13
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	1e-12
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	1e-12
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	1e-12
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	1e-12
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	1e-12
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	2e-12
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	2e-12
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	2e-12
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	2e-12
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	2e-12
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	2e-12
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	2e-12
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	4e-12
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	4e-12
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	5e-12
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	6e-12
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	6e-12
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	6e-12
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	6e-12
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	7e-12
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	8e-12
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	9e-12
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	9e-12
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	1e-11
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	1e-11
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	1e-11
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	1e-11
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	1e-11
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	2e-11
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	2e-11
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	2e-11
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	2e-11
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	2e-11
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	2e-11
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	2e-11
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	3e-11
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	3e-11
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	3e-11
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	3e-11
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	4e-11
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	4e-11
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	5e-11
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	5e-11
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	5e-11
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	5e-11
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	7e-11
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	8e-11
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	8e-11
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	8e-11
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	9e-11
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	1e-10
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	1e-10
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	2e-10
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	2e-10
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	2e-10
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	2e-10
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	2e-10
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	2e-10
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	3e-10
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	3e-10
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	3e-10
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	4e-10
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	4e-10
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	5e-10
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	5e-10
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	7e-10
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	7e-10
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	7e-10
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	7e-10
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	8e-10
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	9e-10
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	1e-09
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	1e-09
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	1e-09
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	1e-09
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	1e-09
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	1e-09
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	2e-09
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	2e-09
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	3e-09
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	4e-09
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	4e-09
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	4e-09
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	4e-09
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	5e-09
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	8e-09
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	1e-08
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	1e-08
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	1e-08
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	1e-08
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	1e-08
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	2e-08
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	4e-08
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	4e-08
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	4e-08
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	4e-08
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	5e-08
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	6e-08
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	6e-08
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	6e-08
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	7e-08
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	7e-08
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	7e-08
cd05077	262	cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do	7e-08
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	7e-08
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	8e-08
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	1e-07
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	1e-07
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	1e-07
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	1e-07
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	2e-07
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	2e-07
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	2e-07
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	2e-07
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	2e-07
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	2e-07
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	2e-07
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	2e-07
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	3e-07
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	3e-07
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	3e-07
cd01098	84	cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain	3e-07
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	3e-07
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	3e-07
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	4e-07
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	5e-07
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	5e-07
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	6e-07
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	8e-07
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	9e-07
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	1e-06
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	1e-06
cd05086	268	cd05086, PTKc_Aatyk2, Catalytic domain of the Prot	1e-06
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	1e-06
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	3e-06
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	3e-06
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	4e-06
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	6e-06
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	6e-06
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	6e-06
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	8e-06
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	9e-06
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	1e-05
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	4e-05
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	4e-05
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	4e-05
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	5e-05
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	7e-05
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	1e-04
PHA02988	283	PHA02988, PHA02988, hypothetical protein; Provisio	2e-04
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	2e-04
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	4e-04
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	4e-04
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	5e-04
PTZ00284	467	PTZ00284, PTZ00284, protein kinase; Provisional	5e-04
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	0.001
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	0.001
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	0.001
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	0.002
PHA02882	294	PHA02882, PHA02882, putative serine/threonine kina	0.003
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	0.004
smart00090	237	smart00090, RIO, RIO-like kinase	0.004

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  166 bits (422), Expect = 4e-47
 Identities = 69/201 (34%), Positives = 104/201 (51%), Gaps = 9/201 (4%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           LG G FGTVY    +  +   VA+K +         +E   E+  + + +H N+V+L G 
Sbjct: 1   LGEGGFGTVYLAR-DKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGV 59

Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKP-NWKLRTEIAMGIAGGLFYLHEECCTQIIHC 626
            ++  +  LV E+   G++   L  +    +      I + I  GL YLH      IIH 
Sbjct: 60  FEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSN---GIIHR 116

Query: 627 DIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE-WFRNMPITVKV 684
           D+KP+NILLD D+   +++DFGL+KLLT D+S   T I GT  Y+APE        + K 
Sbjct: 117 DLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKT-IVGTPAYMAPEVLLGKGYYSEKS 175

Query: 685 DVYSYGVLLLEIICLRRNIDN 705
           D++S GV+L E+  L+  I  
Sbjct: 176 DIWSLGVILYELPELKDLIRK 196

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score =  164 bits (418), Expect = 7e-46
 Identities = 87/281 (30%), Positives = 134/281 (47%), Gaps = 37/281 (13%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH---VAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKN 560
             ++LG GAFG VYKG +          VAVK L     + E+ EF  E + + +  H N
Sbjct: 3   LGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPN 62

Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFL-FGDSKPNWKLRTEIAMGIAGGLFYLHEEC 619
           +VRLLG C +G+   +V E+M  G +  FL     K   K   ++A+ IA G+ YL  + 
Sbjct: 63  IVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEKLTLKDLLQMALQIAKGMEYLESKN 122

Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG---YVAPEWFR 676
               +H D+  +N L+ ++   +ISDFGL++ +  D  +      G K    ++APE  +
Sbjct: 123 F---VHRDLAARNCLVTENLVVKISDFGLSRDIYEDDYYRKR--GGGKLPIKWMAPESLK 177

Query: 677 NMPITVKVDVYSYGVLLLEIICLRR----NIDNEISKVDKAILTDWAYDRYQERTLEALV 732
           +   T K DV+S+GVLL EI  L       + NE  +V + +      D Y+   L    
Sbjct: 178 DGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNE--EVLELL-----EDGYR---LPRP- 226

Query: 733 ENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQML 773
           EN  + +  + ML         C   DP  RPT  ++ + L
Sbjct: 227 ENCPDELYEL-MLQ--------CWAYDPEDRPTFSELVEDL 258

Length = 258

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  164 bits (417), Expect = 7e-46
 Identities = 83/275 (30%), Positives = 130/275 (47%), Gaps = 37/275 (13%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE--FKAEVNGIGQTHHKNLV 562
              +LG G+FGTVYK   + G+   VAVK L    + S+K+   + E+  + +  H N+V
Sbjct: 3   LLRKLGSGSFGTVYKA-KHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIV 61

Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           RL+   ++  +  LV E+   G +  +L      +     +IA+ I  GL YLH      
Sbjct: 62  RLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYLHSN---G 118

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEW-FRNMPIT 681
           IIH D+KP+NILLD++   +I+DFGLAK L    S   T   GT  Y+APE         
Sbjct: 119 IIHRDLKPENILLDENGVVKIADFGLAKKLLKSSSSLTT-FVGTPWYMAPEVLLGGNGYG 177

Query: 682 VKVDVYSYGVLLLEIICLR-----RNIDNEISKVDKAILTDWAYDRYQER----TLEALV 732
            KVDV+S GV+L E++  +      NI +++  + + +     +D  +        + L+
Sbjct: 178 PKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGSEEAKDLI 237

Query: 733 ENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMR 767
           +                     C+ +DPS RPT  
Sbjct: 238 K--------------------KCLNKDPSKRPTAE 252

Length = 260

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score =  159 bits (405), Expect = 4e-44
 Identities = 83/284 (29%), Positives = 124/284 (43%), Gaps = 44/284 (15%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH---VAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKN 560
             ++LG GAFG VYKG +          VAVK L     + + +EF  E   + +  H N
Sbjct: 3   LGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPN 62

Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYLHEE 618
           +V+LLG C E +   +V E+M  G + S+L   ++P   L      A+ IA G+ YL  +
Sbjct: 63  VVKLLGVCTEEEPLYIVMEYMEGGDLLSYL-RKNRPKLSLSDLLSFALQIARGMEYLESK 121

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV---APEWF 675
                IH D+  +N L+ ++   +ISDFGL++ L           RG K  +   APE  
Sbjct: 122 NF---IHRDLAARNCLVGENLVVKISDFGLSRDLY---DDDYYRKRGGKLPIRWMAPESL 175

Query: 676 RNMPITVKVDVYSYGVLLLEIICL----RRNIDNEISKVDKAILTDWAYDRYQERTLEAL 731
           +    T K DV+S+GVLL EI  L       + NE                     +   
Sbjct: 176 KEGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNE--------------------EVLEY 215

Query: 732 VEND--LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQML 773
           ++N   L    N         +   C  EDP  RPT  ++ ++L
Sbjct: 216 LKNGYRLPQPPNCP--PELYDLMLQCWAEDPEDRPTFSELVEIL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  158 bits (402), Expect = 9e-44
 Identities = 69/280 (24%), Positives = 113/280 (40%), Gaps = 43/280 (15%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE-FKAEVNGIGQTHHKNLVR 563
             E+LG G+FG VY    +  +   VA+K +       ++E    E+  + +  H N+VR
Sbjct: 3   ILEKLGEGSFGKVYLA-RDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVR 61

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG-----IAGGLFYLHEE 618
           L    ++     LV E+   G +   L    K   +L +E         I   L YLH +
Sbjct: 62  LYDVFEDEDKLYLVMEYCEGGDLFDLL----KKRGRL-SEDEARFYLRQILSALEYLHSK 116

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               I+H D+KP+NILLD+  + +++DFGLA+ L        T + GT  Y+APE     
Sbjct: 117 ---GIVHRDLKPENILLDEDGHVKLADFGLARQLD-PGEKLTTFV-GTPEYMAPEVLLGK 171

Query: 679 PITVKVDVYSYGVLLLEIICLRR------NIDNEISKVDKAILTDWAYDRYQERTLEALV 732
                VD++S GV+L E++  +        +     K+ K        +       + L+
Sbjct: 172 GYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWDISPEAKDLI 231

Query: 733 ENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM 772
                                  + +DP  R T  +  Q 
Sbjct: 232 RK--------------------LLVKDPEKRLTAEEALQH 251

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score =  157 bits (399), Expect = 3e-43
 Identities = 82/285 (28%), Positives = 122/285 (42%), Gaps = 45/285 (15%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH---VAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKN 560
             ++LG GAFG VYKG +          VAVK L     +   +EF  E   + +  H N
Sbjct: 3   LGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPN 62

Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPN---WKLRTEIAMGIAGGLFYLHE 617
           +V+LLG C E +  ++V E+M  G +  +L   ++P           A+ IA G+ YL  
Sbjct: 63  IVKLLGVCTEEEPLMIVMEYMPGGDLLDYL-RKNRPKELSLSDLLSFALQIARGMEYLES 121

Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ----SHTNTAIRGTKGYVAPE 673
           +     IH D+  +N L+ ++   +ISDFGL++ L  D           IR    ++APE
Sbjct: 122 KNF---IHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPIR----WMAPE 174

Query: 674 WFRNMPITVKVDVYSYGVLLLEIICL----RRNIDNEISKVDKAILTDWAYDRYQERTLE 729
             +    T K DV+S+GVLL EI  L       + N                      LE
Sbjct: 175 SLKEGKFTSKSDVWSFGVLLWEIFTLGEEPYPGMSN-------------------AEVLE 215

Query: 730 ALVEND-LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQML 773
            L +   L    N         +   C  EDP  RPT  ++ ++L
Sbjct: 216 YLKKGYRLPKPPNCP--PELYKLMLQCWAEDPEDRPTFSELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score =  146 bits (372), Expect = 1e-39
 Identities = 86/291 (29%), Positives = 126/291 (43%), Gaps = 52/291 (17%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNH--VAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKNLVR 563
           ++LG GAFG VYKG +         VAVK L     + E K+F  E   + +  H N+VR
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVR 60

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFL---------FGDSKPNWKLRTEIAMGIAGGLFY 614
           LLG C E +   LV E+M  G +  +L            S  + K     A+ IA G+ Y
Sbjct: 61  LLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEY 120

Query: 615 LHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV---- 670
           L  +   + +H D+  +N L+ +    +ISDFGL++ +  D  +       T G +    
Sbjct: 121 LASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKK----TGGKLPIRW 173

Query: 671 -APEWFRNMPITVKVDVYSYGVLLLEIICLRR----NIDNEISKVDKAILTDWAYDRYQE 725
            APE  ++   T K DV+S+GVLL EI  L       + N                   E
Sbjct: 174 MAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN-------------------E 214

Query: 726 RTLEALVE-NDLEAMNNVT-MLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
             LE L +   L         L+  ++    C Q DP  RPT  ++ + LE
Sbjct: 215 EVLEYLRKGYRLPKPEYCPDELYELML---SCWQLDPEDRPTFSELVERLE 262

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  129 bits (326), Expect = 2e-33
 Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 22/221 (9%)

Query: 500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE--KEFKAEVNGIGQTH 557
           E TRG  E LGRG+FG+VY    +  +   +AVK +       E  +  + E+  +    
Sbjct: 1   EWTRG--ELLGRGSFGSVYLAL-DKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQ 57

Query: 558 HKNLVRLLG-YCDEGQNRLLVY-EFMSNGTVASFLFGDSKPNWKLR-TEI---AMGIAGG 611
           H N+VR  G   DE +N L ++ E++S G+++S L    K   KL    I      I  G
Sbjct: 58  HPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLL----KKFGKLPEPVIRKYTRQILEG 113

Query: 612 LFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLL-TLDQSHTNTAIRGTKGYV 670
           L YLH      I+H DIK  NIL+D     +++DFG AK L  ++      ++RGT  ++
Sbjct: 114 LAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWM 170

Query: 671 APEWFRNMPITVKVDVYSYGVLLLEIICLRR---NIDNEIS 708
           APE  R        D++S G  ++E+   +     + N ++
Sbjct: 171 APEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMA 211

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  127 bits (321), Expect = 6e-33
 Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 15/195 (7%)

Query: 506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
            E++G+G FG VYK      +   VA+K +    ++ +++   E+  + +  H N+V+  
Sbjct: 5   LEKIGKGGFGEVYKARHKR-TGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYY 63

Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTE-----IAMGIAGGLFYLHEECC 620
           G   +     +V EF S G++   L    K   +  TE     +   +  GL YLH    
Sbjct: 64  GSYLKKDELWIVMEFCSGGSLKDLL----KSTNQTLTESQIAYVCKELLKGLEYLHSN-- 117

Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPI 680
             IIH DIK  NILL      ++ DFGL+  L+  ++       GT  ++APE     P 
Sbjct: 118 -GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMV--GTPYWMAPEVINGKPY 174

Query: 681 TVKVDVYSYGVLLLE 695
             K D++S G+  +E
Sbjct: 175 DYKADIWSLGITAIE 189

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score =  121 bits (305), Expect = 1e-30
 Identities = 55/210 (26%), Positives = 99/210 (47%), Gaps = 27/210 (12%)

Query: 506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA---EVNGIGQTHHKNLV 562
            +++G+G+FG VY             +K+++ +   SEKE +    EV  + + +H N++
Sbjct: 5   IKQIGKGSFGKVYLV-RRKSDGKLYVLKEID-LSNMSEKEREDALNEVKILKKLNHPNII 62

Query: 563 RLLGYCD---EGQNRLLVYEFMSNGTVASFLFGDSKPN--------WKLRTEIAMGIAGG 611
           +   Y +   E     +V E+   G ++  +    K               ++ +     
Sbjct: 63  K---YYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLA---- 115

Query: 612 LFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVA 671
           L YLH     +I+H DIKPQNI L  +   ++ DFG++K+L+       T + GT  Y++
Sbjct: 116 LKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVV-GTPYYLS 171

Query: 672 PEWFRNMPITVKVDVYSYGVLLLEIICLRR 701
           PE  +N P   K D++S G +L E+  L+ 
Sbjct: 172 PELCQNKPYNYKSDIWSLGCVLYELCTLKH 201

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score =  119 bits (297), Expect = 8e-29
 Identities = 71/280 (25%), Positives = 114/280 (40%), Gaps = 32/280 (11%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE---FKAEVNGIGQT--HHK 559
              +LG G+FG VY           VA+K L    +   KE   F  E+  I  +  H  
Sbjct: 4   ILRKLGEGSFGEVYLARDRK----LVALKVLAKKLESKSKEVERFLREI-QILASLNHPP 58

Query: 560 NLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTE----IAMGIAGGLFYL 615
           N+V+L  +  +  +  LV E++  G++   L         L       I   I   L YL
Sbjct: 59  NIVKLYDFFQDEGSLYLVMEYVDGGSLED-LLKKIGRKGPLSESEALFILAQILSALEYL 117

Query: 616 HEECCTQIIHCDIKPQNILLDDHYN-ARISDFGLAKLLTLDQSHTN-----TAIRGTKGY 669
           H +    IIH DIKP+NILLD      ++ DFGLAKLL    S ++     +   GT GY
Sbjct: 118 HSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGY 174

Query: 670 VAPEWFRNM---PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQER 726
           +APE    +     +   D++S G+ L E++      + E +    +       +     
Sbjct: 175 MAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPS 234

Query: 727 TLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTM 766
               L  ++ E ++        +      + +DP +R + 
Sbjct: 235 LASPLSPSNPELISKA--ASDLLKK---LLAKDPKNRLSS 269

Length = 384

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score =  115 bits (291), Expect = 9e-29
 Identities = 67/197 (34%), Positives = 98/197 (49%), Gaps = 14/197 (7%)

Query: 506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           + +LG G FG V+ G  N   +  VAVK L       E  F  E   + +  H  LV+L 
Sbjct: 11  ERKLGAGQFGEVWMGTWN--GTTKVAVKTLKPGTMSPE-AFLQEAQIMKKLRHDKLVQLY 67

Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG--IAGGLFYLHEECCTQI 623
             C E +   +V E+MS G++  FL        +L   + M   IA G+ YL        
Sbjct: 68  AVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR---NY 124

Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMPI 680
           IH D+  +NIL+ ++   +I+DFGLA+L+  D+    TA  G K    + APE       
Sbjct: 125 IHRDLAARNILVGENLVCKIADFGLARLIEDDEY---TAREGAKFPIKWTAPEAANYGRF 181

Query: 681 TVKVDVYSYGVLLLEII 697
           T+K DV+S+G+LL EI+
Sbjct: 182 TIKSDVWSFGILLTEIV 198

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score =  115 bits (290), Expect = 9e-29
 Identities = 73/278 (26%), Positives = 121/278 (43%), Gaps = 41/278 (14%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
               +G+G FG V  G         VAVK L      + + F AE + +    H NLV+L
Sbjct: 10  LGATIGKGEFGDVMLGDY---RGQKVAVKCLKDD-STAAQAFLAEASVMTTLRHPNLVQL 65

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFL--FGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           LG   +G    +V E+M+ G++  +L   G +      +   A+ +  G+ YL E+    
Sbjct: 66  LGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK---N 122

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            +H D+  +N+L+ +   A++SDFGLAK  +  Q      ++ T    APE  R    + 
Sbjct: 123 FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKWT----APEALREKKFST 178

Query: 683 KVDVYSYGVLLLEIICLRRN------IDNEISKVDKAILTDWAYDRYQERTLEALVENDL 736
           K DV+S+G+LL EI    R       + + +  V+K          Y+    E       
Sbjct: 179 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKG---------YRMEAPEGCPPEVY 229

Query: 737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
           + M +             C + DP+ RPT +++ + L 
Sbjct: 230 KVMKD-------------CWELDPAKRPTFKQLREQLA 254

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score =  112 bits (283), Expect = 8e-28
 Identities = 56/199 (28%), Positives = 104/199 (52%), Gaps = 15/199 (7%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKK--LNSVFQDSEKEFKAEVNGIGQTHHKNLV 562
             + +GRGAFG VYKG +N+ + + VA+K+  L  + +++ K    E++ +    H N+V
Sbjct: 4   LGDLIGRGAFGVVYKG-LNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIV 62

Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKL-RTEIAMGIAG---GLFYLHEE 618
           + +G  +   +  ++ E+  NG++   +    K       + +A+ +     GL YLHE+
Sbjct: 63  KYIGSIETSDSLYIILEYAENGSLRQII----KKFGPFPESLVAVYVYQVLQGLAYLHEQ 118

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               +IH DIK  NIL       +++DFG+A  L  D S  + ++ GT  ++APE     
Sbjct: 119 ---GVIHRDIKAANILTTKDGVVKLADFGVATKLN-DVSKDDASVVGTPYWMAPEVIEMS 174

Query: 679 PITVKVDVYSYGVLLLEII 697
             +   D++S G  ++E++
Sbjct: 175 GASTASDIWSLGCTVIELL 193

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score =  109 bits (275), Expect = 1e-26
 Identities = 73/281 (25%), Positives = 132/281 (46%), Gaps = 40/281 (14%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNH--VAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLVR 563
           + +G G FG V +G + +       VA+K L +   D ++ +F  E + +GQ  H N++R
Sbjct: 10  KVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIR 69

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFL-FGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           L G   + +  +++ E+M NG++  FL   D K        +  GIA G+ YL E     
Sbjct: 70  LEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMN--- 126

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA-----IRGTKGYVAPEWFRN 677
            +H D+  +NIL++ +   ++SDFGL++ L   ++   T      IR T    APE    
Sbjct: 127 YVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWT----APEAIAY 182

Query: 678 MPITVKVDVYSYGVLLLEIICLRR----NIDNEISKVDKAILTDWAYDRYQERTLEALVE 733
              T   DV+S+G+++ E++        ++ N+   V KA+   +   R           
Sbjct: 183 RKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ--DVIKAVEDGY---RLP--------- 228

Query: 734 NDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
                M+  + L++ ++    C Q+D + RPT  ++   L+
Sbjct: 229 ---PPMDCPSALYQLML---DCWQKDRNERPTFSQIVSTLD 263

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score =  105 bits (265), Expect = 2e-25
 Identities = 59/195 (30%), Positives = 98/195 (50%), Gaps = 8/195 (4%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
              +LG G FG V++G  N  ++  VAVK L     D  K+F AE   + +  H  L++L
Sbjct: 10  LLRKLGAGQFGEVWEGLWN--NTTPVAVKTLKPGTMD-PKDFLAEAQIMKKLRHPKLIQL 66

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG--IAGGLFYLHEECCTQ 622
              C   +   +V E M  G++  +L G +    KL   I M   +A G+ YL  +    
Sbjct: 67  YAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ---N 123

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH D+  +N+L+ ++   +++DFGLA+++  D        +    + APE       ++
Sbjct: 124 YIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSI 183

Query: 683 KVDVYSYGVLLLEII 697
           K DV+S+G+LL EI+
Sbjct: 184 KSDVWSFGILLTEIV 198

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score =  104 bits (261), Expect = 8e-25
 Identities = 58/192 (30%), Positives = 94/192 (48%), Gaps = 11/192 (5%)

Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS-EKEFKAEVNGIGQTHHKNLVRLLG 566
            LG+G+ G VYK   +  +    A+KK++    +   K+   E+  +       +V+  G
Sbjct: 8   VLGQGSSGVVYKV-RHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYG 66

Query: 567 -YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR--TEIAMGIAGGLFYLHEECCTQI 623
            +  EG+  + V E+M  G++A  L               IA  I  GL YLH +    I
Sbjct: 67  AFYKEGEISI-VLEYMDGGSLADLL--KKVGKIPEPVLAYIARQILKGLDYLHTK--RHI 121

Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVK 683
           IH DIKP N+L++     +I+DFG++K+L       NT + GT  Y++PE  +    +  
Sbjct: 122 IHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFV-GTVTYMSPERIQGESYSYA 180

Query: 684 VDVYSYGVLLLE 695
            D++S G+ LLE
Sbjct: 181 ADIWSLGLTLLE 192

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score =  103 bits (259), Expect = 1e-24
 Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 16/197 (8%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNS-VFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           E++G+G FG VYKG +   +   VAVK   S +  D +++F  E   + Q  H N+V+L+
Sbjct: 1   EKIGKGNFGDVYKGVLKGNTE--VAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLI 58

Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGI--AGGLFYLHEECCTQI 623
           G C + Q   +V E +  G++ +FL    K    ++  + M +  A G+ YL  + C   
Sbjct: 59  GVCVQKQPIYIVMELVPGGSLLTFLRK-KKNRLTVKKLLQMSLDAAAGMEYLESKNC--- 114

Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK----GYVAPEWFRNMP 679
           IH D+  +N L+ ++   +ISDFG+++    ++    T   G K     + APE      
Sbjct: 115 IHRDLAARNCLVGENNVLKISDFGMSR---EEEGGIYTVSDGLKQIPIKWTAPEALNYGR 171

Query: 680 ITVKVDVYSYGVLLLEI 696
            T + DV+SYG+LL E 
Sbjct: 172 YTSESDVWSYGILLWET 188

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score =  103 bits (259), Expect = 1e-24
 Identities = 67/195 (34%), Positives = 96/195 (49%), Gaps = 11/195 (5%)

Query: 507 EELGRGAFGTVYKGFVNM--GSSNHVAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVR 563
           +ELG G FG+V KG   M  G    VAVK L        +KEF  E + + Q  H  +VR
Sbjct: 1   KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVR 60

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           L+G C +G+  +LV E    G +  +L    +       E+A  +A G+ YL E      
Sbjct: 61  LIGVC-KGEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYL-ESK--HF 116

Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRG---TKGYVAPEWFRNMPI 680
           +H D+  +N+LL + + A+ISDFG+++ L     +      G    K Y APE       
Sbjct: 117 VHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWY-APECINYGKF 175

Query: 681 TVKVDVYSYGVLLLE 695
           + K DV+SYGV L E
Sbjct: 176 SSKSDVWSYGVTLWE 190

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score =  102 bits (256), Expect = 6e-24
 Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 20/205 (9%)

Query: 505 FKEELGRGAFGTVYKG---FVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKN 560
           F ++LG G FG V       +   +   VAVK LN S  +    +F+ E+  +    H+N
Sbjct: 8   FIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHEN 67

Query: 561 LVRLLGYCDE--GQNRLLVYEFMSNGTVASFL-FGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           +V+  G C++  G++  L+ E++ +G++  +L     + N K     +  I  G+ YL  
Sbjct: 68  IVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGS 127

Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD------QSHTNTAIRGTKGYVA 671
           +   + IH D+  +NIL++     +ISDFGLAK+L  D      +    + I     + A
Sbjct: 128 Q---RYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIF----WYA 180

Query: 672 PEWFRNMPITVKVDVYSYGVLLLEI 696
           PE  R    +   DV+S+GV L E+
Sbjct: 181 PECLRTSKFSSASDVWSFGVTLYEL 205

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score =  101 bits (253), Expect = 1e-23
 Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 29/213 (13%)

Query: 508 ELGRGAFGTVYKGFVNMGSSNH----VAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLV 562
           ELG+G+FG VY+G             VA+K +N      E+ EF  E + + + +  ++V
Sbjct: 13  ELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVV 72

Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFL-----------FGDSKPNWKLRTEIAMGIAGG 611
           RLLG    GQ  L+V E M+ G + S+L                P  +   ++A  IA G
Sbjct: 73  RLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGP-PTLQKFIQMAAEIADG 131

Query: 612 LFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG--- 668
           + YL      + +H D+  +N ++ +    +I DFG+ +    D   T+   +G KG   
Sbjct: 132 MAYLAA---KKFVHRDLAARNCMVAEDLTVKIGDFGMTR----DIYETDYYRKGGKGLLP 184

Query: 669 --YVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
             ++APE  ++   T K DV+S+GV+L E+  L
Sbjct: 185 VRWMAPESLKDGVFTTKSDVWSFGVVLWEMATL 217

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score =  100 bits (251), Expect = 1e-23
 Identities = 60/197 (30%), Positives = 99/197 (50%), Gaps = 18/197 (9%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNH--VAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            +LG G FG V++G       N   VA+K L S     +++F+ EV  + +  HK+L+ L
Sbjct: 12  RKLGSGYFGEVWEGL----WKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISL 67

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG--IAGGLFYLHEECCTQ 622
              C  G+   ++ E M  G++ +FL         + + I M   +A G+ YL E+    
Sbjct: 68  FAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ---N 124

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLD---QSHTNTAIRGTKGYVAPEWFRNMP 679
            IH D+  +NIL+ +    +++DFGLA+L+  D    S      + T    APE   +  
Sbjct: 125 SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWT----APEAASHGT 180

Query: 680 ITVKVDVYSYGVLLLEI 696
            + K DV+S+G+LL E+
Sbjct: 181 FSTKSDVWSFGILLYEM 197

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 99.5 bits (248), Expect = 3e-23
 Identities = 65/200 (32%), Positives = 99/200 (49%), Gaps = 15/200 (7%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           ++LG G FG V+ G+ N      VA+K L       E  F AE N + Q  H  LVRL  
Sbjct: 12  KKLGAGQFGEVWMGYYN--GHTKVAIKSLKQGSMSPEA-FLAEANLMKQLQHPRLVRLYA 68

Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG--IAGGLFYLHEECCTQII 624
              + +   ++ E+M NG++  FL         +   I M   IA G+ ++  +     I
Sbjct: 69  VVTQ-EPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK---NYI 124

Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMPIT 681
           H D++  NIL+ +    +I+DFGLA+L+  ++    TA  G K    + APE       T
Sbjct: 125 HRDLRAANILVSETLCCKIADFGLARLIEDNEY---TAREGAKFPIKWTAPEAINYGTFT 181

Query: 682 VKVDVYSYGVLLLEIICLRR 701
           +K DV+S+G+LL EI+   R
Sbjct: 182 IKSDVWSFGILLTEIVTYGR 201

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 99.5 bits (248), Expect = 6e-23
 Identities = 65/218 (29%), Positives = 105/218 (48%), Gaps = 33/218 (15%)

Query: 505 FKEELGRGAFGTVYKGFV----NMGSSNHVAVKKL-NSVFQDSEKEFKAEVNGIGQTHHK 559
           F EELG GAFG VYKG +       S+  VA+K L  +     ++EF+ E   +    H 
Sbjct: 9   FLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHP 68

Query: 560 NLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDS---------------KPNWKLR-TE 603
           N+V LLG C + Q   +++E++++G +  FL  +S                         
Sbjct: 69  NIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLH 128

Query: 604 IAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLL-TLD----QSH 658
           IA+ IA G+ YL        +H D+  +N L+ +    +ISDFGL++ + + D    QS 
Sbjct: 129 IAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSK 185

Query: 659 TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEI 696
           +   +R    ++ PE       T + D++S+GV+L EI
Sbjct: 186 SLLPVR----WMPPEAILYGKFTTESDIWSFGVVLWEI 219

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 98.5 bits (246), Expect = 8e-23
 Identities = 78/282 (27%), Positives = 123/282 (43%), Gaps = 55/282 (19%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK---AEVNGIGQTHHKNLVR 563
           E +G+G+FGTV K  V   S   + V K       +EKE +   +EVN + +  H N+VR
Sbjct: 6   ETIGKGSFGTVRK--VRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVR 63

Query: 564 LLGYCDEGQNR-----LLVYEFMSNGTVASFLFGDSKPN--------WKLRTEIAMGIAG 610
              Y D   +R      +V E+   G +A  +    K          W++ T++ +    
Sbjct: 64  ---YYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLA--- 117

Query: 611 GLFYLH--EECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG 668
            L+  H   +    ++H D+KP NI LD + N ++ DFGLAK+L  D S   T + GT  
Sbjct: 118 -LYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYV-GTPY 175

Query: 669 YVAPEWFRNMPITVKVDVYSYGVLLLEIICLR-----RNIDNEISKVDKAILTDWAYDRY 723
           Y++PE   +M    K D++S G L+ E+  L      RN     SK+ +       Y RY
Sbjct: 176 YMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRRIPY-RY 234

Query: 724 QERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPT 765
               L  ++++                     +  DP  RP+
Sbjct: 235 SS-ELNEVIKS--------------------MLNVDPDKRPS 255

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 98.1 bits (244), Expect = 9e-23
 Identities = 70/194 (36%), Positives = 100/194 (51%), Gaps = 11/194 (5%)

Query: 508 ELGRGAFGTVYKGFVNMGSSNH-VAVKKLNSVFQDS--EKEFKAEVNGIGQTHHKNLVRL 564
           ELG G FGTV KG   M  S   VAVK L +   D   + E   E N + Q  +  +VR+
Sbjct: 2   ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRM 61

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
           +G C E ++ +LV E    G +  FL  +     K  TE+   ++ G+ YL E   T  +
Sbjct: 62  IGIC-EAESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEE---TNFV 117

Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRG---TKGYVAPEWFRNMPIT 681
           H D+  +N+LL   + A+ISDFGL+K L  D+++      G    K Y APE       +
Sbjct: 118 HRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWY-APECMNYYKFS 176

Query: 682 VKVDVYSYGVLLLE 695
            K DV+S+GVL+ E
Sbjct: 177 SKSDVWSFGVLMWE 190

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 97.7 bits (243), Expect = 1e-22
 Identities = 57/198 (28%), Positives = 101/198 (51%), Gaps = 9/198 (4%)

Query: 500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHK 559
           E+T    +E+G G FG V+ G+        VA+K +      SE++F  E   + +  H 
Sbjct: 5   ELT--LVQEIGSGQFGLVWLGY--WLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHP 59

Query: 560 NLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEE 618
            LV+L G C E     LV+EFM +G ++ +L     K + +    + + +  G+ YL   
Sbjct: 60  KLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESS 119

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               +IH D+  +N L+ ++   ++SDFG+ + +  DQ  ++T  +    + +PE F   
Sbjct: 120 N---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFS 176

Query: 679 PITVKVDVYSYGVLLLEI 696
             + K DV+S+GVL+ E+
Sbjct: 177 KYSSKSDVWSFGVLMWEV 194

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 97.6 bits (243), Expect = 2e-22
 Identities = 66/198 (33%), Positives = 105/198 (53%), Gaps = 17/198 (8%)

Query: 506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE--KEFKAEVNGIGQTHHKNLVR 563
           K +LG G +G VY+G V    S  VAVK L    +D+   +EF  E   + +  H NLV+
Sbjct: 11  KHKLGGGQYGEVYEG-VWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQ 66

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFL--FGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           LLG C       ++ EFM+ G +  +L      + N  +   +A  I+  + YL ++   
Sbjct: 67  LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK--- 123

Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNM 678
             IH D+  +N L+ +++  +++DFGL++L+T D   T TA  G K    + APE     
Sbjct: 124 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAHAGAKFPIKWTAPESLAYN 180

Query: 679 PITVKVDVYSYGVLLLEI 696
             ++K DV+++GVLL EI
Sbjct: 181 KFSIKSDVWAFGVLLWEI 198

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 95.7 bits (239), Expect = 5e-22
 Identities = 67/205 (32%), Positives = 100/205 (48%), Gaps = 32/205 (15%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKLN--SVFQDSEKEF-KAEVNGIGQTHHKNLVRL 564
           LG+G+FG V    V    +  + A+K L    + +  E E    E N + + +H  +V+L
Sbjct: 1   LGKGSFGKVLL--VRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKL 58

Query: 565 LGYCDEGQNRL-LVYEFMSNGTVASFL-----FGDSKPNWKLRT-----EIAMGIAGGLF 613
             Y  + + +L LV E+   G + S L     F +       R      EI + +     
Sbjct: 59  H-YAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEE------RARFYAAEIVLALE---- 107

Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE 673
           YLH      II+ D+KP+NILLD   + +++DFGLAK L+ + S TNT   GT  Y+APE
Sbjct: 108 YLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFC-GTPEYLAPE 163

Query: 674 WFRNMPITVKVDVYSYGVLLLEIIC 698
                     VD +S GVLL E++ 
Sbjct: 164 VLLGKGYGKAVDWWSLGVLLYEMLT 188

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 96.0 bits (239), Expect = 6e-22
 Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 19/199 (9%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           F +ELG G FG V+ G         VA+K +      SE +F  E   + +  H NLV+L
Sbjct: 8   FLKELGSGQFGVVHLGKWR--GKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQL 64

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG----IAGGLFYLHEECC 620
            G C + +   +V E+M+NG + ++L        KL TE  +     +   + YL     
Sbjct: 65  YGVCTKQRPIFIVTEYMANGCLLNYLRERKG---KLGTEWLLDMCSDVCEAMEYLESNG- 120

Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRN 677
              IH D+  +N L+ +    ++SDFGLA+ +  DQ    T+ +GTK    +  PE F  
Sbjct: 121 --FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY---TSSQGTKFPVKWAPPEVFDY 175

Query: 678 MPITVKVDVYSYGVLLLEI 696
              + K DV+S+GVL+ E+
Sbjct: 176 SRFSSKSDVWSFGVLMWEV 194

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 96.6 bits (240), Expect = 6e-22
 Identities = 82/293 (27%), Positives = 138/293 (47%), Gaps = 55/293 (18%)

Query: 508 ELGRGAFGTVYKG----FVNMGSSNHVAVKKLNSVFQDSEK-EF--KAEVNGIGQTHHKN 560
           ELG+G+FG VY+G     +   +   VAVK +N      E+ EF  +A V      HH  
Sbjct: 13  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH-- 70

Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLF----------GDSKPNWKLRTEIAMGIAG 610
           +VRLLG   +GQ  L+V E M++G + S+L           G   P  +   ++A  IA 
Sbjct: 71  VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIAD 130

Query: 611 GLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG-- 668
           G+ YL+ +   + +H D+  +N ++   +  +I DFG    +T D   T+   +G KG  
Sbjct: 131 GMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFG----MTRDIYETDYYRKGGKGLL 183

Query: 669 ---YVAPEWFRNMPITVKVDVYSYGVLLLEIICLR----RNIDNEISKVDKAILTDWAYD 721
              ++APE  ++   T   D++S+GV+L EI  L     + + NE  +V K ++     D
Sbjct: 184 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE--QVLKFVMDGGYLD 241

Query: 722 RYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
           +          +N  E + ++  +         C Q +P  RPT  ++  +L+
Sbjct: 242 Q---------PDNCPERVTDLMRM---------CWQFNPKMRPTFLEIVNLLK 276

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 95.3 bits (237), Expect = 1e-21
 Identities = 79/282 (28%), Positives = 134/282 (47%), Gaps = 31/282 (10%)

Query: 506 KEELGRGAFGTVYKGFVNMGS--SNHVAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKNLV 562
           +E +G G FG V +G + +       VA+K L S + + + ++F +E + +GQ  H N++
Sbjct: 9   EEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNII 68

Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFL-FGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
            L G   + +  +++ EFM NG + SFL   D +        +  GIA G+ YL E    
Sbjct: 69  HLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSE---M 125

Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH-TNTAIRGTK---GYVAPEWFRN 677
             +H D+  +NIL++ +   ++SDFGL++ L  D S  T T+  G K    + APE    
Sbjct: 126 NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAY 185

Query: 678 MPITVKVDVYSYGVLLLEIICL--RRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND 735
              T   DV+SYG+++ E++    R   D     V  AI  D+                 
Sbjct: 186 RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRLP-------------- 231

Query: 736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV 777
              M+  T LH+ ++    C Q+D + RP   ++   L+ ++
Sbjct: 232 -PPMDCPTALHQLMLD---CWQKDRNARPKFGQIVSTLDKMI 269

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 99.5 bits (248), Expect = 2e-21
 Identities = 86/343 (25%), Positives = 153/343 (44%), Gaps = 35/343 (10%)

Query: 448 LFGSSALINLLLVSACCLGFLVVNRKKFM---RPHQED-----QGVSYMNLRCFTYKELV 499
            + +  L   L+++    GF+ +  +  +   R   ED     Q       +  T  +++
Sbjct: 630 FYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITINDIL 689

Query: 500 EVTRGFKEE--LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH 557
                 KEE  + RG  G  YKG           VK++N V  +S     +E+  +G+  
Sbjct: 690 SSL---KEENVISRGKKGASYKGKSIKNGM-QFVVKEINDV--NSIPS--SEIADMGKLQ 741

Query: 558 HKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           H N+V+L+G C   +   L++E++    ++  L   S   W+ R +IA+GIA  L +LH 
Sbjct: 742 HPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRNLS---WERRRKIAIGIAKALRFLHC 798

Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
            C   ++  ++ P+ I++D      +    L  LL  D     ++      YVAPE    
Sbjct: 799 RCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKCFISS-----AYVAPETRET 852

Query: 678 MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLE 737
             IT K D+Y +G++L+E++  +   D E   V  +I+ +WA   Y +  L+  ++  + 
Sbjct: 853 KDITEKSDIYGFGLILIELLTGKSPADAE-FGVHGSIV-EWARYCYSDCHLDMWIDPSIR 910

Query: 738 A---MNNVTMLHRFVM-VAFWCIQEDPSHRPTMRKVTQMLEGV 776
               +N   ++   VM +A  C   DP+ RP    V + LE  
Sbjct: 911 GDVSVNQNEIVE--VMNLALHCTATDPTARPCANDVLKTLESA 951

Length = 968

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 94.8 bits (236), Expect = 2e-21
 Identities = 64/205 (31%), Positives = 102/205 (49%), Gaps = 30/205 (14%)

Query: 509 LGRGAFGTVYKG-FVNMGSSNH--VAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG GAFGTVYKG ++  G      VA+K L       + KE   E   +    H ++VRL
Sbjct: 15  LGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRL 74

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFG-----DSKP--NWKLRTEIAMGIAGGLFYLHE 617
           LG C       L+ + M  G +  ++        S+   NW ++      IA G+ YL E
Sbjct: 75  LGIC-LSSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQ------IAKGMSYLEE 127

Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN-----TAIRGTKGYVAP 672
           +   +++H D+  +N+L+    + +I+DFGLAKLL +D+   +       I+    ++A 
Sbjct: 128 K---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIK----WMAL 180

Query: 673 EWFRNMPITVKVDVYSYGVLLLEII 697
           E   +   T K DV+SYGV + E++
Sbjct: 181 ESILHRIYTHKSDVWSYGVTVWELM 205

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 92.4 bits (230), Expect = 9e-21
 Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 25/214 (11%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE----KEFKAEVNGIGQTHHKNLVRL 564
           +G G FG VY   VN+ +   +AVK++    QD++    KE   E+  +    H NLV+ 
Sbjct: 8   IGGGTFGKVYTA-VNLDTGELMAVKEIR--IQDNDPKTIKEIADEMKVLELLKHPNLVKY 64

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
            G     +   +  E+ S GT+   L      +  +     + +  GL YLH      I+
Sbjct: 65  YGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSH---GIV 121

Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA------IRGTKGYVAPEWFRNM 678
           H DIKP NI LD +   ++ DFG A  L   +++T T       + GT  Y+APE     
Sbjct: 122 HRDIKPANIFLDHNGVIKLGDFGCAVKL---KNNTTTMGEEVQSLAGTPAYMAPEVITGG 178

Query: 679 PITVK---VDVYSYGVLLLEIICLRR---NIDNE 706
                    D++S G ++LE+   +R    +DNE
Sbjct: 179 KGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE 212

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|216511 pfam01453, B_lectin, D-mannose binding lectin

 Score = 87.4 bits (217), Expect = 1e-20
 Identities = 40/98 (40%), Positives = 54/98 (55%), Gaps = 2/98 (2%)

Query: 72  SKTIVWYASAVNP-APRGSKLRLTANRGLVLEDPEGREIWKS-EISTGQAAFGVLYDTGN 129
           ++T+VW A+ +NP       L L ++  LVL D  GR +W S     G     VL D GN
Sbjct: 1   NQTVVWVANRLNPLTDSSYTLILQSDGNLVLYDGNGRVVWSSNTSGKGSGCVAVLQDDGN 60

Query: 130 FLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSSRR 167
            ++ + + + LWQSFDHPTDTLLP Q      +  SRR
Sbjct: 61  LVLYDNSGKVLWQSFDHPTDTLLPGQKDGNVVIGGSRR 98

These proteins include mannose-specific lectins from plants as well as bacteriocins from bacteria. Length = 109

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 91.9 bits (229), Expect = 1e-20
 Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 24/201 (11%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
             E+LG G++G+VYK  ++  +   VA+K +  V +D + E   E++ + Q     +V+ 
Sbjct: 7   ILEKLGEGSYGSVYKA-IHKETGQVVAIKVV-PVEEDLQ-EIIKEISILKQCDSPYIVKY 63

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT------EIAM---GIAGGLFYL 615
            G   +  +  +V E+   G+V+  +        K+        EIA        GL YL
Sbjct: 64  YGSYFKNTDLWIVMEYCGAGSVSDIM--------KITNKTLTEEEIAAILYQTLKGLEYL 115

Query: 616 HEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF 675
           H     + IH DIK  NILL++   A+++DFG++  LT   +  NT I GT  ++APE  
Sbjct: 116 HSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVI-GTPFWMAPEVI 171

Query: 676 RNMPITVKVDVYSYGVLLLEI 696
           + +    K D++S G+  +E+
Sbjct: 172 QEIGYNNKADIWSLGITAIEM 192

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 91.9 bits (228), Expect = 1e-20
 Identities = 78/282 (27%), Positives = 132/282 (46%), Gaps = 37/282 (13%)

Query: 497 ELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT 556
            L ++T G  E +G G FG V +G    G    VAVK +      + + F  E   + + 
Sbjct: 4   NLQKLTLG--EIIGEGEFGAVLQGEY-TGQK--VAVKNIKC--DVTAQAFLEETAVMTKL 56

Query: 557 HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLF--GDSKPNWKLRTEIAMGIAGGLFY 614
           HHKNLVRLLG         +V E MS G + +FL   G +  +     + ++ +A G+ Y
Sbjct: 57  HHKNLVRLLGVILH-NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEY 115

Query: 615 LHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEW 674
           L  +   +++H D+  +NIL+ +   A++SDFGLA++ ++   ++   ++ T    APE 
Sbjct: 116 LESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWT----APEA 168

Query: 675 FRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEN 734
            ++   + K DV+SYGVLL E+    R                  Y +   + ++  VE 
Sbjct: 169 LKHKKFSSKSDVWSYGVLLWEVFSYGRA----------------PYPKMSLKEVKECVEK 212

Query: 735 D--LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
              +E           +M + W  + +P  RP+  K+ + LE
Sbjct: 213 GYRMEPPEGCPADVYVLMTSCW--ETEPKKRPSFHKLREKLE 252

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 92.1 bits (229), Expect = 1e-20
 Identities = 68/212 (32%), Positives = 100/212 (47%), Gaps = 29/212 (13%)

Query: 509 LGRGAFGTVYKGFV----NMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVR 563
           LG GAFG VY+G             VAVK L     +  E +F  E   + + +H+N+VR
Sbjct: 14  LGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVR 73

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIAGGLFYL 615
           L+G   E   R ++ E M+ G + SFL  +++P  +  + + M         +A G  YL
Sbjct: 74  LIGVSFERLPRFILLELMAGGDLKSFL-RENRPRPERPSSLTMKDLLFCARDVAKGCKYL 132

Query: 616 HEECCTQIIHCDIKPQNILLDDHYNAR---ISDFGLAKLLTLDQSHTNTAIRGTKG---- 668
            E      IH DI  +N LL      R   I+DFG+A+    D    +   +G +     
Sbjct: 133 EEN---HFIHRDIAARNCLLTCKGPGRVAKIADFGMAR----DIYRASYYRKGGRAMLPI 185

Query: 669 -YVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
            ++ PE F +   T K DV+S+GVLL EI  L
Sbjct: 186 KWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSL 217

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 92.0 bits (228), Expect = 1e-20
 Identities = 57/196 (29%), Positives = 103/196 (52%), Gaps = 11/196 (5%)

Query: 509 LGRGAFGTVYKGFVNMG--SSNHVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLVRLL 565
           +G G FG V++G + M       VA+K L   + + ++ +F +E + +GQ  H N++RL 
Sbjct: 13  IGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLE 72

Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--GIAGGLFYLHEECCTQI 623
           G   + +  +++ E+M NG +  +L  D    +     + M  GIA G+ YL +      
Sbjct: 73  GVVTKFKPAMIITEYMENGALDKYL-RDHDGEFSSYQLVGMLRGIAAGMKYLSD---MNY 128

Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG--YVAPEWFRNMPIT 681
           +H D+  +NIL++ +   ++SDFGL+++L  D   T T   G     + APE       T
Sbjct: 129 VHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFT 188

Query: 682 VKVDVYSYGVLLLEII 697
              DV+S+G+++ E++
Sbjct: 189 SASDVWSFGIVMWEVM 204

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 91.7 bits (228), Expect = 2e-20
 Identities = 66/216 (30%), Positives = 101/216 (46%), Gaps = 31/216 (14%)

Query: 505 FKEELGRGAFGTVYKG----FVNMGSSNHVAVKKL-NSVFQDSEKEFKAEVNGIGQTHHK 559
            K ELG GAFG V+ G             VAVK L  +   D+ K+F+ E   +    H+
Sbjct: 9   LKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHE 68

Query: 560 NLVRLLGYCDEGQNRLLVYEFMSNGTVASFL--------FGDSKPNWKLR------TEIA 605
           N+V+  G C EG   ++V+E+M +G +  FL        F  S  +           +IA
Sbjct: 69  NIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIA 128

Query: 606 MGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLD----QSHTN 660
           + IA G+ YL  +     +H D+  +N L+      +I DFG+++ + T D      HT 
Sbjct: 129 VQIASGMVYLASQ---HFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTM 185

Query: 661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEI 696
             IR    ++ PE       T + DV+S+GV+L EI
Sbjct: 186 LPIR----WMPPESIMYRKFTTESDVWSFGVVLWEI 217

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 91.3 bits (227), Expect = 2e-20
 Identities = 60/202 (29%), Positives = 99/202 (49%), Gaps = 24/202 (11%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE-----KEFKAEVNGIGQTHHKNL 561
           E LG G+FG+VY+G  N+   +  AVK+++            K+ + E+  + +  H N+
Sbjct: 6   ELLGSGSFGSVYEGL-NLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNI 64

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEE 618
           V+ LG   E  N  +  E +  G++A  L  +G   +P  +L T     I  GL YLH+ 
Sbjct: 65  VQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTR---QILLGLEYLHDR 121

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG---YVAPEWF 675
                +H DIK  NIL+D +   +++DFG+AK     Q    +  +  KG   ++APE  
Sbjct: 122 ---NTVHRDIKGANILVDTNGVVKLADFGMAK-----QVVEFSFAKSFKGSPYWMAPEVI 173

Query: 676 RNM-PITVKVDVYSYGVLLLEI 696
                  +  D++S G  +LE+
Sbjct: 174 AQQGGYGLAADIWSLGCTVLEM 195

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 91.2 bits (226), Expect = 3e-20
 Identities = 65/212 (30%), Positives = 108/212 (50%), Gaps = 27/212 (12%)

Query: 508 ELGRGAFGTVY----KGFVNMGSSNHVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLV 562
           ELG+G+FG VY    KG V       VA+K +N      E+ EF  E + + + +  ++V
Sbjct: 13  ELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 72

Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLF----------GDSKPNWKLRTEIAMGIAGGL 612
           RLLG   +GQ  L++ E M+ G + S+L             + P+ K   ++A  IA G+
Sbjct: 73  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGM 132

Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG---- 668
            YL+     + +H D+  +N ++ + +  +I DFG    +T D   T+   +G KG    
Sbjct: 133 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPV 185

Query: 669 -YVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
            +++PE  ++   T   DV+S+GV+L EI  L
Sbjct: 186 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 217

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 90.9 bits (225), Expect = 3e-20
 Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 14/196 (7%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           ++LG G FG V+ G+ N  +S  VAVK L      S + F  E N +    H  LVRL  
Sbjct: 12  KKLGAGQFGEVWMGYYN--NSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYA 68

Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQII 624
              + +   ++ E+M+ G++  FL  D      L   I  +  IA G+ Y+  +     I
Sbjct: 69  VVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYI 125

Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMPIT 681
           H D++  N+L+ +    +I+DFGLA+++  ++    TA  G K    + APE       T
Sbjct: 126 HRDLRAANVLVSESLMCKIADFGLARVIEDNEY---TAREGAKFPIKWTAPEAINFGSFT 182

Query: 682 VKVDVYSYGVLLLEII 697
           +K DV+S+G+LL EI+
Sbjct: 183 IKSDVWSFGILLYEIV 198

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 91.1 bits (227), Expect = 4e-20
 Identities = 58/230 (25%), Positives = 97/230 (42%), Gaps = 53/230 (23%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH-VAVK-----------KLNSVFQDSEKEFKAEVNG 552
           F + +G G+F TV         +N   A+K           K+  V    EKE    +NG
Sbjct: 5   FGKIIGEGSFSTVVLAKEK--ETNKEYAIKILDKRQLIKEKKVKYVKI--EKEVLTRLNG 60

Query: 553 IGQTHHKNLVRLLGYCDEGQNRL-LVYEFMSNGTVASFL--FGD-SKPNWKLRT-EIAMG 607
                H  +++L  Y  + +  L  V E+  NG +  ++  +G   +   +    EI + 
Sbjct: 61  -----HPGIIKLY-YTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLA 114

Query: 608 IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR--- 664
           +     YLH +    IIH D+KP+NILLD   + +I+DFG AK+L  + S  +       
Sbjct: 115 LE----YLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATN 167

Query: 665 ----------------GTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC 698
                           GT  YV+PE     P     D+++ G ++ +++ 
Sbjct: 168 IDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLT 217

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 90.7 bits (226), Expect = 5e-20
 Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 17/199 (8%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
             E++G GA G VYK   +  +   VA+KK+  + + +++    E+  +    H N+V  
Sbjct: 23  NLEKIGEGASGEVYKA-TDRATGKEVAIKKMR-LRKQNKELIINEILIMKDCKHPNIVDY 80

Query: 565 LGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTE-----IAMGIAGGLFYLHEE 618
                   + L +V E+M  G++   +      N+    E     +   +  GL YLH  
Sbjct: 81  YD-SYLVGDELWVVMEYMDGGSLTDII----TQNFVRMNEPQIAYVCREVLQGLEYLHS- 134

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               +IH DIK  NILL    + +++DFG A  LT ++S  N+ + GT  ++APE  +  
Sbjct: 135 --QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNS-VVGTPYWMAPEVIKRK 191

Query: 679 PITVKVDVYSYGVLLLEII 697
               KVD++S G++ +E+ 
Sbjct: 192 DYGPKVDIWSLGIMCIEMA 210

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 89.4 bits (222), Expect = 7e-20
 Identities = 75/278 (26%), Positives = 123/278 (44%), Gaps = 48/278 (17%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKLNSVFQDSEKEFKAEVNGI---GQTHHKNLVR- 563
           LG+G++G+VYK  V   S N   A+K+++ +   S+KE +  VN I      +H N++  
Sbjct: 8   LGKGSYGSVYK--VKRLSDNQFYALKEVD-LGSMSQKEREDAVNEIRILASVNHPNIISY 64

Query: 564 ----LLGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTE-----IAMGIAGGLF 613
               L G      N+L +V E+   G ++  +    K   KL  E     I + +  GL 
Sbjct: 65  KEAFLDG------NKLCIVMEYAPFGDLSKAI-SKRKKKRKLIPEQEIWRIFIQLLRGLQ 117

Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE 673
            LHE+   +I+H D+K  NILL  +   +I D G++K+L   ++   T I GT  Y+APE
Sbjct: 118 ALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLK--KNMAKTQI-GTPHYMAPE 171

Query: 674 WFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVE 733
            ++  P + K D++S G LL E+       +          + D  Y + Q      +  
Sbjct: 172 VWKGRPYSYKSDIWSLGCLLYEMATFAPPFEAR-------SMQDLRY-KVQRGKYPPIPP 223

Query: 734 NDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ 771
              + + N              +Q  P  RP   K+  
Sbjct: 224 IYSQDLQNFIR---------SMLQVKPKLRPNCDKILA 252

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|237995 cd00028, B_lectin, Bulb-type mannose-specific lectin

 Score = 85.4 bits (212), Expect = 8e-20
 Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 11/126 (8%)

Query: 23  NGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAV 82
           +  +S GQ L ++ S          F LGF +L  +      I Y    S+T+VW A+  
Sbjct: 1   SNPLSSGQTLVSSGSL---------FELGFFKLIMQSRDYNLILYKGS-SRTVVWVANRD 50

Query: 83  NPAPRGSKLRLTANRGLVLEDPEGREIWKSEISTGQAAFG-VLYDTGNFLIVNTNSERLW 141
           NP+     L L ++  LV+ D  G  +W S  +     +  VL D GN ++ +++   LW
Sbjct: 51  NPSGSSCTLTLQSDGNLVIYDGSGTVVWSSNTTRVNGNYVLVLLDDGNLVLYDSDGNFLW 110

Query: 142 QSFDHP 147
           QSFD+P
Sbjct: 111 QSFDYP 116

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses. Length = 116

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 88.8 bits (220), Expect = 2e-19
 Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 22/208 (10%)

Query: 502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKK--LNSVFQD-SEKEFKA---EVNGIGQ 555
           T+G  E LG+GA+GTVY G  N G    +AVK+  L++     +EKE++    EV+ +  
Sbjct: 3   TKG--EVLGKGAYGTVYCGLTNQGQL--IAVKQVELDTSNVLAAEKEYEKLQEEVDLLKS 58

Query: 556 THHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFL--FGDSKPNWKLRTEIAMGIAGGLF 613
             H N+V+ LG C +     +  EF+  G+++S L  FG   P      +    I  G+ 
Sbjct: 59  LKHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFG-PLPEPVFC-KYTKQILDGVA 116

Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLL---TLDQSHTNT--AIRGTKG 668
           YLH  C   ++H DIK  N++L  +   ++ DFG A+ L    L  +H+N   ++ GT  
Sbjct: 117 YLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPY 173

Query: 669 YVAPEWFRNMPITVKVDVYSYGVLLLEI 696
           ++APE         K D++S G  + E+
Sbjct: 174 WMAPEVINESGYGRKSDIWSIGCTVFEM 201

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 88.3 bits (219), Expect = 2e-19
 Identities = 77/288 (26%), Positives = 118/288 (40%), Gaps = 47/288 (16%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN-------SVFQDSEKEFK---AEVNGIG-Q 555
           E LG GAFG VYK        N +A+K++N          ++ +K      +EV  I  Q
Sbjct: 6   EHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQ 65

Query: 556 THHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTE-----IAMGIAG 610
             H N+VR      E     +V + +    +    F   K   +  TE     I + +  
Sbjct: 66  LRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGE-HFNSLKEKKQRFTEERIWNIFVQMVL 124

Query: 611 GLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN---TAIRGTK 667
            L YLH+E   +I+H D+ P NI+L +     I+DFGLAK     Q       T++ GT 
Sbjct: 125 ALRYLHKE--KRIVHRDLTPNNIMLGEDDKVTITDFGLAK-----QKQPESKLTSVVGTI 177

Query: 668 GYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNI--DNEISKVDKAILTDWAYDRYQE 725
            Y  PE  +N P   K DV+++G +L ++  L+      N +S   K             
Sbjct: 178 LYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATK------------- 224

Query: 726 RTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQML 773
                +VE   E +           V   C+  D   RP + +V+ M+
Sbjct: 225 -----IVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMI 267

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 87.8 bits (218), Expect = 4e-19
 Identities = 68/233 (29%), Positives = 93/233 (39%), Gaps = 57/233 (24%)

Query: 510 GRGAFGTVYKGFVN------------MGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH 557
           G+GAFG V    V             M     V    + +V    E+    E+N      
Sbjct: 9   GKGAFGKVCI--VQKRDTKKMFAMKYMNKQKCVEKGSVRNVLN--ERRILQELN------ 58

Query: 558 HKNLVRL-LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG--------- 607
           H  LV L   + DE +N  LV + +        L GD      LR  ++           
Sbjct: 59  HPFLVNLWYSFQDE-ENMYLVVDLL--------LGGD------LRYHLSQKVKFSEEQVK 103

Query: 608 -----IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA 662
                I   L YLH +    IIH DIKP NILLD+  +  I+DF +A  +T D   T+T+
Sbjct: 104 FWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTS 160

Query: 663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAIL 715
             GT GY+APE       +V VD +S GV   E +  +R        +   I 
Sbjct: 161 --GTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIR 211

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 87.6 bits (217), Expect = 5e-19
 Identities = 74/280 (26%), Positives = 134/280 (47%), Gaps = 35/280 (12%)

Query: 509 LGRGAFGTVYKGFVNMGSSNH--VAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLVRLL 565
           +G G FG V  G + +       VA+K L + + + ++ +F +E + +GQ  H N++ L 
Sbjct: 12  IGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLE 71

Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM-----GIAGGLFYLHEECC 620
           G   + +  ++V E+M NG++ +FL    + +    T I +     GIA G+ YL +   
Sbjct: 72  GVVTKSKPVMIVTEYMENGSLDAFL----RKHDGQFTVIQLVGMLRGIASGMKYLSD--- 124

Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRN 677
              +H D+  +NIL++ +   ++SDFGL+++L  D     T  RG K    + APE    
Sbjct: 125 MGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTT-RGGKIPIRWTAPEAIAY 183

Query: 678 MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLE 737
              T   DV+SYG+++ E++        E+S  D     +  Y       L A       
Sbjct: 184 RKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGY------RLPA------- 230

Query: 738 AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV 777
            M+    LH+ ++    C Q+D + RP   ++  +L+ ++
Sbjct: 231 PMDCPAALHQLMLD---CWQKDRNERPKFEQIVSILDKLI 267

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 87.9 bits (218), Expect = 6e-19
 Identities = 86/311 (27%), Positives = 134/311 (43%), Gaps = 52/311 (16%)

Query: 487 YMNLRCFTYKELVEVTRG---FKEELGRGAFGTVYK----GFVNMGSSNHVAVKKLNSVF 539
           Y++     Y    E  R    F + LG GAFG V +    G     +   VAVK L    
Sbjct: 18  YIDPTQLPYDLKWEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA 77

Query: 540 QDSEKE-FKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPN 597
             SE+E   +E+  +    +H+N+V LLG C  G   L++ E+   G + +FL    K  
Sbjct: 78  HSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFL--RRKRE 135

Query: 598 WKLRTEIAMG----IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT 653
             L  E  +     +A G+ +L  + C   IH D+  +N+LL      +I DFGLA+ + 
Sbjct: 136 SFLTLEDLLSFSYQVAKGMAFLASKNC---IHRDLAARNVLLTHGKIVKICDFGLARDIM 192

Query: 654 LDQSHTNTAIRGTK----GYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRN------I 703
            D   +N  ++G       ++APE   N   T + DV+SYG+LL EI  L  N      +
Sbjct: 193 ND---SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPV 249

Query: 704 DNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHR 763
           D++  K+ K        + Y+    E       + M               C   DP  R
Sbjct: 250 DSKFYKLIK--------EGYRMAQPEHAPAEIYDIMKT-------------CWDADPLKR 288

Query: 764 PTMRKVTQMLE 774
           PT +++ Q++ 
Sbjct: 289 PTFKQIVQLIG 299

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 86.8 bits (215), Expect = 6e-19
 Identities = 62/221 (28%), Positives = 110/221 (49%), Gaps = 23/221 (10%)

Query: 506 KEELGRGAFGTVYKGFVNMGSSNHV-AVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLV 562
             ++G+G+FG V+K  V   +   V A+K+++    +  +  +A  E   + +     ++
Sbjct: 5   LNKIGKGSFGVVFK--VVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYII 62

Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFL---FGDSKPN---WKLRTEIAMGIAGGLFYLH 616
           R      +     +V E+  NG +   L    G   P    W+   +I +G+A    +LH
Sbjct: 63  RYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLA----HLH 118

Query: 617 EECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR 676
            +   +I+H DIK  N+ LD + N +I D G+AKLL+ + +  NT I GT  Y++PE   
Sbjct: 119 SK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANT-IVGTPYYLSPELCE 174

Query: 677 NMPITVKVDVYSYGVLLLEIICLRR---NIDNEISKVDKAI 714
           + P   K DV++ GV+L E  C  +   + +N+ + + K I
Sbjct: 175 DKPYNEKSDVWALGVVLYE-CCTGKHPFDANNQGALILKII 214

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 87.3 bits (217), Expect = 6e-19
 Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 17/197 (8%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE---FKAEVNGIGQTHHKNLVR 563
           E +G+G+FG VYK      ++  VA+K ++   +++E E    + E+  + Q     + +
Sbjct: 7   ECIGKGSFGEVYKAIDK-RTNQVVAIKVID--LEEAEDEIEDIQQEIQFLSQCRSPYITK 63

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM---GIAGGLFYLHEECC 620
             G   +G    ++ E+   G+    L    KP     T IA     +  GL YLHEE  
Sbjct: 64  YYGSFLKGSKLWIIMEYCGGGSCLDLL----KPGKLDETYIAFILREVLLGLEYLHEE-- 117

Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPI 680
              IH DIK  NILL +  + +++DFG++  LT   S  NT + GT  ++APE  +    
Sbjct: 118 -GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFV-GTPFWMAPEVIKQSGY 175

Query: 681 TVKVDVYSYGVLLLEII 697
             K D++S G+  +E+ 
Sbjct: 176 DEKADIWSLGITAIELA 192

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 86.5 bits (214), Expect = 8e-19
 Identities = 74/271 (27%), Positives = 120/271 (44%), Gaps = 33/271 (12%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVK--KLNSVFQDSEKEFKAEVNGIGQTHHKNLV 562
           F +ELG G FG V  G         VA+K  K  S+   SE EF  E   + +  H+ LV
Sbjct: 8   FLKELGTGQFGVVKYG--KWRGQYDVAIKMIKEGSM---SEDEFIEEAKVMMKLSHEKLV 62

Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLF-GDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           +L G C + +   +V E+MSNG + ++L     +       E+   +  G+ YL  +   
Sbjct: 63  QLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESK--- 119

Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV---APEWFRNM 678
           Q IH D+  +N L+DD    ++SDFGL++ + LD  +T++   G+K  V    PE     
Sbjct: 120 QFIHRDLAARNCLVDDQGCVKVSDFGLSRYV-LDDEYTSSV--GSKFPVRWSPPEVLLYS 176

Query: 679 PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA 738
             + K DV+++GVL+ E+  L +                  Y+R+        V   L  
Sbjct: 177 KFSSKSDVWAFGVLMWEVYSLGKM----------------PYERFNNSETVEKVSQGLRL 220

Query: 739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKV 769
                   +   + + C  E    RPT +++
Sbjct: 221 YRPHLASEKVYAIMYSCWHEKAEERPTFQQL 251

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 86.8 bits (216), Expect = 1e-18
 Identities = 66/230 (28%), Positives = 106/230 (46%), Gaps = 45/230 (19%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE-----FKAEVNGIGQTHHKNL 561
            ++G G +G VYK   N  +   VA+KK+     ++EKE        E+  + +  H N+
Sbjct: 5   AQIGEGTYGQVYKA-RNKKTGELVALKKIRM---ENEKEGFPITAIREIKLLQKLRHPNI 60

Query: 562 VRLLG-YCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTE-----IAMGIAGGLFY 614
           VRL      +G+  + +V+E+M +  +   L     P  K  TE         +  GL Y
Sbjct: 61  VRLKEIVTSKGKGSIYMVFEYMDH-DLTGLL---DSPEVKF-TESQIKCYMKQLLEGLQY 115

Query: 615 LHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH--TNTAIRGTKGYVAP 672
           LH      I+H DIK  NIL+++    +++DFGLA+  T   S   TN  I  T  Y  P
Sbjct: 116 LHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVI--TLWYRPP 170

Query: 673 EWFRNMPI-------TVKVDVYSYGVLLLEIICLRRNI---DNEISKVDK 712
           E      +         +VD++S G +L E+  L + I     E+ +++K
Sbjct: 171 E------LLLGATRYGPEVDMWSVGCILAELF-LGKPIFQGSTELEQLEK 213

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 85.7 bits (212), Expect = 2e-18
 Identities = 74/275 (26%), Positives = 123/275 (44%), Gaps = 46/275 (16%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA---EVNGIGQTHHKNLVRLL 565
           +GRGAFG V+           V +K++  V Q ++ E  A   E   +    H N++   
Sbjct: 8   VGRGAFGIVHL-CRRKADQKLVIIKQIP-VEQMTKDERLAAQNECQVLKLLSHPNIIEYY 65

Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL------FGDSKPNWKLRTEIAMGIAGGLFYLHEEC 619
               E +  ++V E+   GT+A ++        D         +I +     L ++H + 
Sbjct: 66  ENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLA----LHHVHTK- 120

Query: 620 CTQIIHCDIKPQNILLDDHYN-ARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
              I+H D+K QNILLD H    +I DFG++K+L+  +S   T + GT  Y++PE     
Sbjct: 121 --LILHRDLKTQNILLDKHKMVVKIGDFGISKILS-SKSKAYTVV-GTPCYISPELCEGK 176

Query: 679 PITVKVDVYSYGVLLLEIICLRRNID--NEISKVDKAILTDWA--YDRYQERTLEALVEN 734
           P   K D+++ G +L E+  L+R  +  N  + V K +   +A   DRY    L  L+ +
Sbjct: 177 PYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPISDRYSPD-LRQLILS 235

Query: 735 DLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKV 769
                    ML+            DPS RP + ++
Sbjct: 236 ---------MLNL-----------DPSKRPQLSQI 250

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|214519 smart00108, B_lectin, Bulb-type mannose-specific lectin

 Score = 81.2 bits (201), Expect = 2e-18
 Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 3/111 (2%)

Query: 37  STEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAVNPAPRGSKLRLTAN 96
           S +  +S +  F LGF  L  ++ +   I Y    S+T+VW A+  NP      L L ++
Sbjct: 6   SGQTLVSGNSLFELGFFTLIMQNDYN-LILYKSS-SRTVVWVANRDNPVSDSCTLTLQSD 63

Query: 97  RGLVLEDPEGREIWKSEISTGQAAFG-VLYDTGNFLIVNTNSERLWQSFDH 146
             LVL D +GR +W S  +     +  VL D GN +I +++   LWQSFD+
Sbjct: 64  GNLVLYDGDGRVVWSSNTTGANGNYVLVLLDDGNLVIYDSDGNFLWQSFDY 114

Length = 114

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 85.3 bits (211), Expect = 3e-18
 Identities = 67/285 (23%), Positives = 121/285 (42%), Gaps = 53/285 (18%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           F +ELG G FG V+ G     +   VA+K +N     SE++F  E   + +  H  LV+L
Sbjct: 8   FMKELGSGQFGVVHLG--KWRAQIKVAIKAINEGAM-SEEDFIEEAKVMMKLSHPKLVQL 64

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG----IAGGLFYLHEECC 620
            G C + +   +V EFM NG + ++L    +   KL  ++ +     +  G+ YL     
Sbjct: 65  YGVCTQQKPLYIVTEFMENGCLLNYL---RQRQGKLSKDMLLSMCQDVCEGMEYLER--- 118

Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPI 680
              IH D+  +N L+      ++SDFG+ + +  D+  +++  +    +  PE F     
Sbjct: 119 NSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKY 178

Query: 681 TVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN 740
           + K DV+S+GVL+ E+                          + E  +    +++ E + 
Sbjct: 179 SSKSDVWSFGVLMWEV--------------------------FTEGKMPFEKKSNYEVVE 212

Query: 741 NVTMLHRF------------VMVAFWCIQEDPSHRPTMRKVTQML 773
            ++   R             VM + W   E P  RPT  ++ + +
Sbjct: 213 MISRGFRLYRPKLASMTVYEVMYSCW--HEKPEGRPTFAELLRAI 255

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 84.8 bits (210), Expect = 3e-18
 Identities = 60/198 (30%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 509 LGRGAFGTVYKGFV--NMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKNLVRLL 565
           +G+G FG VY G +  + G   H AVK LN +    E ++F  E   +    H N++ LL
Sbjct: 3   IGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLL 62

Query: 566 GYC--DEGQNRLLVYEFMSNGTVASFLFGDSK-PNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           G C   EG   L+V  +M +G + +F+  ++  P  K      + +A G+ YL  +   +
Sbjct: 63  GICLPSEGSP-LVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK---K 118

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLL---TLDQSHTNTAIRGTKGYVAPEWFRNMP 679
            +H D+  +N +LD+ +  +++DFGLA+ +        H +T  +    ++A E  +   
Sbjct: 119 FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQK 178

Query: 680 ITVKVDVYSYGVLLLEII 697
            T K DV+S+GVLL E++
Sbjct: 179 FTTKSDVWSFGVLLWELM 196

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 84.9 bits (210), Expect = 4e-18
 Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 20/205 (9%)

Query: 509 LGRGAFGTVYKGFVNM--GSSNHVAVK--KLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG G FG+V +G ++   GS   VAVK  KL+       +EF +E   +    H N+++L
Sbjct: 7   LGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKL 66

Query: 565 LGYCDEGQNR------LLVYEFMSNGTVASFLF----GDSKPNWKLRT--EIAMGIAGGL 612
           +G C E  +       +++  FM +G + SFL     G       L+T  +  + IA G+
Sbjct: 67  IGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGM 126

Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAI-RGTKGYVA 671
            YL        IH D+  +N +L +     ++DFGL+K +     +    I +    ++A
Sbjct: 127 EYLSNR---NFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIA 183

Query: 672 PEWFRNMPITVKVDVYSYGVLLLEI 696
            E   +   T K DV+++GV + EI
Sbjct: 184 IESLADRVYTSKSDVWAFGVTMWEI 208

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 85.0 bits (211), Expect = 4e-18
 Identities = 59/181 (32%), Positives = 89/181 (49%), Gaps = 21/181 (11%)

Query: 506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQ-THHKNLVRL 564
            E +G G +G VYK   +  +   VA+K ++ + +D E+E K E N + + ++H N+   
Sbjct: 11  VEVIGEGTYGKVYKA-RHKKTGQLVAIKIMDII-EDEEEEIKEEYNILRKYSNHPNIATF 68

Query: 565 LG-------YCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTE----IAMGIAGGL 612
            G         ++ Q  L LV E    G+V   + G  K   +L+ E    I      GL
Sbjct: 69  YGAFIKKNPPGNDDQ--LWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGL 126

Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAP 672
            YLHE    ++IH DIK QNILL  +   ++ DFG++  L       NT I GT  ++AP
Sbjct: 127 AYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNTFI-GTPYWMAP 182

Query: 673 E 673
           E
Sbjct: 183 E 183

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 84.8 bits (210), Expect = 4e-18
 Identities = 58/210 (27%), Positives = 109/210 (51%), Gaps = 21/210 (10%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKL----------NSVFQDSEKEFKAEVNGIGQT 556
           E +G+G +G VY   +N+ +   +AVK++          +S  +D  K  ++E+  +   
Sbjct: 7   ELIGKGTYGRVYLA-LNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL 65

Query: 557 HHKNLVRLLGYCDEGQNRLLVY-EFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYL 615
            H N+V+ LG  +  +  L ++ E++  G++ S L    +   +L       +  GL YL
Sbjct: 66  DHLNIVQYLG-FETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYL 124

Query: 616 HEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD--QSHTNTAIRGTKGYVAPE 673
           H +    I+H D+K  N+L+D     +ISDFG++K  + D   +  N +++G+  ++APE
Sbjct: 125 HSK---GILHRDLKADNLLVDADGICKISDFGISK-KSDDIYDNDQNMSMQGSVFWMAPE 180

Query: 674 WFRN--MPITVKVDVYSYGVLLLEIICLRR 701
              +     + KVD++S G ++LE+   RR
Sbjct: 181 VIHSYSQGYSAKVDIWSLGCVVLEMFAGRR 210

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 84.3 bits (208), Expect = 6e-18
 Identities = 79/273 (28%), Positives = 119/273 (43%), Gaps = 31/273 (11%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           ++LG G FG V+ G  N   +  VAVK L       E  F  E   + +  H  LV+L  
Sbjct: 12  KKLGNGQFGEVWMGTWN--GNTKVAVKTLKPGTMSPES-FLEEAQIMKKLRHDKLVQLYA 68

Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR--TEIAMGIAGGLFYLHEECCTQII 624
              E +   +V E+MS G++  FL        KL    ++A  +A G+ Y+        I
Sbjct: 69  VVSE-EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER---MNYI 124

Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMPIT 681
           H D++  NIL+ D    +I+DFGLA+L+   + +  TA +G K    + APE       T
Sbjct: 125 HRDLRSANILVGDGLVCKIADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFT 181

Query: 682 VKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN 741
           +K DV+S+G+LL E++   R        V    + +       ER        D     +
Sbjct: 182 IKSDVWSFGILLTELVTKGR--------VPYPGMNNREVLEQVERGYRMPCPQDCPISLH 233

Query: 742 VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
             ML         C ++DP  RPT   +   LE
Sbjct: 234 ELMLQ--------CWKKDPEERPTFEYLQSFLE 258

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 83.9 bits (208), Expect = 7e-18
 Identities = 64/269 (23%), Positives = 116/269 (43%), Gaps = 23/269 (8%)

Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE--KEFKAEVNGIGQTHHKNLVRLL 565
           ELG G  G V K  V    +  +   K   +  +    K+   E++ + + +   +V   
Sbjct: 8   ELGAGNSGVVSK--VLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFY 65

Query: 566 GYC-DEGQNRLLVYEFMSNGTVASFLFGDSKP-NWKLRTEIAMGIAGGLFYLHEECCTQI 623
           G   + G   + + E+M  G++   L         ++  +IA+ +  GL YLHE+   +I
Sbjct: 66  GAFYNNGDISICM-EYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEK--HKI 122

Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVK 683
           IH D+KP NIL++     ++ DFG++  L    + T     GT  Y+APE  +    +VK
Sbjct: 123 IHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFV---GTSSYMAPERIQGNDYSVK 179

Query: 684 VDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVT 743
            D++S G+ L+E+   R     E +     I             L+ +V      + +  
Sbjct: 180 SDIWSLGLSLIELATGRFPYPPE-NDPPDGIF----------ELLQYIVNEPPPRLPSGK 228

Query: 744 MLHRFVMVAFWCIQEDPSHRPTMRKVTQM 772
               F      C+ +DP  RP+ +++ + 
Sbjct: 229 FSPDFQDFVNLCLIKDPRERPSYKELLEH 257

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 84.4 bits (209), Expect = 7e-18
 Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 23/214 (10%)

Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE--KEFKAEVNGI 553
           +++VE++R     LG GA G+V K    + ++  +   K  +   + +  K+   E+   
Sbjct: 1   EKIVELSR-----LGEGAGGSVTK--CRLKNTGMIFALKTITTDPNPDLQKQILRELEIN 53

Query: 554 GQTHHKNLVRLLG-YCDEGQNRL-LVYEFMSNGTVASFLFGDSKP-----NWKLRTEIAM 606
                  +V+  G + DE  + + +  E+   G++ S ++   K        K+  +IA 
Sbjct: 54  KSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDS-IYKKVKKRGGRIGEKVLGKIAE 112

Query: 607 GIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGT 666
            +  GL YLH     +IIH DIKP NILL      ++ DFG++  L    + T T   GT
Sbjct: 113 SVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGTFT---GT 166

Query: 667 KGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLR 700
             Y+APE  +  P ++  DV+S G+ LLE+   R
Sbjct: 167 SFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNR 200

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 84.1 bits (208), Expect = 9e-18
 Identities = 72/231 (31%), Positives = 106/231 (45%), Gaps = 21/231 (9%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKLNSVFQDSEKEFKAEVNG--IGQTHHKNLVRLL 565
           LG+G FG V      + ++  + A KKL+       K  +  +N   I +      +  L
Sbjct: 1   LGKGGFGEVCA--CQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSL 58

Query: 566 GYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQ 622
            Y  E ++ L LV   M+ G +   ++   +P +     I  A  I  GL +LH+    +
Sbjct: 59  AYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR---R 115

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           I++ D+KP+N+LLDDH N RISD GLA  + L          GT GY+APE  +      
Sbjct: 116 IVYRDLKPENVLLDDHGNVRISDLGLA--VELKGGKKIKGRAGTPGYMAPEVLQGEVYDF 173

Query: 683 KVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVE 733
            VD ++ G  L E+I  R        KV+K  L        + RTLE  VE
Sbjct: 174 SVDWFALGCTLYEMIAGRSPFRQRKEKVEKEEL--------KRRTLEMAVE 216

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 84.0 bits (208), Expect = 1e-17
 Identities = 66/222 (29%), Positives = 101/222 (45%), Gaps = 42/222 (18%)

Query: 509 LGRGAFGTV----YKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG------IGQTHH 558
           LG GAFG V      G  N   ++ VAVK L      +EK+    V+       IG+  H
Sbjct: 20  LGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKD--DATEKDLSDLVSEMEMMKMIGK--H 75

Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR----------------T 602
           KN++ LLG C +     +V E+ ++G +  FL     P                      
Sbjct: 76  KNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLV 135

Query: 603 EIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA 662
             A  +A G+ +L  + C   IH D+  +N+L+ + +  +I+DFGLA+    D  H +  
Sbjct: 136 SFAYQVARGMEFLASKKC---IHRDLAARNVLVTEDHVMKIADFGLAR----DIHHIDYY 188

Query: 663 IRGTKG-----YVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
            + T G     ++APE   +   T + DV+S+GVLL EI  L
Sbjct: 189 RKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTL 230

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 83.4 bits (206), Expect = 1e-17
 Identities = 65/204 (31%), Positives = 106/204 (51%), Gaps = 20/204 (9%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKK--LNSVFQDSEKEFKA-------EVNGIGQTHHK 559
           +G G+FG+VY G +N  S   +AVK+  L SV   S+   ++       E+  + +  H+
Sbjct: 8   IGSGSFGSVYLG-MNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHE 66

Query: 560 NLVRLLGYCDEGQNRLLVY-EFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
           N+V+ LG      + L ++ E++  G+VA+ L         L       I  GL YLH  
Sbjct: 67  NIVQYLG-SSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNR 125

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT-----AIRGTKGYVAPE 673
               IIH DIK  NIL+D+    +ISDFG++K L  +   T T     +++G+  ++APE
Sbjct: 126 ---GIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPE 182

Query: 674 WFRNMPITVKVDVYSYGVLLLEII 697
             +    T K D++S G L++E++
Sbjct: 183 VVKQTSYTRKADIWSLGCLVVEML 206

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 83.2 bits (205), Expect = 1e-17
 Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 15/194 (7%)

Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           +LG+G FG V+ G  N   +  VA+K L       E  F  E   + +  H+ LV+L   
Sbjct: 13  KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 69

Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR--TEIAMGIAGGLFYLHEECCTQIIH 625
             E +   +V E+MS G++  FL G+     +L    ++A  IA G+ Y+        +H
Sbjct: 70  VSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 125

Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMPITV 682
            D++  NIL+ ++   +++DFGLA+L+   + +  TA +G K    + APE       T+
Sbjct: 126 RDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTI 182

Query: 683 KVDVYSYGVLLLEI 696
           K DV+S+G+LL E+
Sbjct: 183 KSDVWSFGILLTEL 196

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 83.5 bits (207), Expect = 2e-17
 Identities = 76/305 (24%), Positives = 131/305 (42%), Gaps = 72/305 (23%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT---------- 556
            E+G GA+GTVYK   ++ +   VA+KK+      SE        GI  +          
Sbjct: 5   AEIGEGAYGTVYKA-RDLNTGRFVALKKVR--VPLSE-------EGIPLSTLREIALLKQ 54

Query: 557 ----HHKNLVRLLGYC-----DEGQNRLLVYEFMSNGTVASFLFGDSKPN---WKLRTEI 604
                H N+VRLL  C     D      LV+E +    +A++L    KP      ++ ++
Sbjct: 55  LESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIK-DL 112

Query: 605 AMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR 664
              +  G+ +LH     +I+H D+KPQNIL+      +I+DFGLA++ + + + T+  + 
Sbjct: 113 MRQLLRGVDFLH---SHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMALTSVVV- 168

Query: 665 GTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNI---DNEISKVDKAIL------ 715
            T  Y APE          VD++S G +  E+   RR +    +E  ++DK I       
Sbjct: 169 -TLWYRAPEVLLQSSYATPVDMWSVGCIFAELF-RRRPLFRGTSEADQLDK-IFDVIGLP 225

Query: 716 --TDW---------AYDRYQERTLEALV-ENDLEAMNNVTMLHRFVMVAFWCIQEDPSHR 763
              +W         ++  Y  R+ ++ V E   E    + +L +        +  +P  R
Sbjct: 226 SEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEG---LDLLKK-------MLTFNPHKR 275

Query: 764 PTMRK 768
            +  +
Sbjct: 276 ISAFE 280

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 82.4 bits (203), Expect = 2e-17
 Identities = 61/200 (30%), Positives = 96/200 (48%), Gaps = 15/200 (7%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLL 565
           E +GRG FG V+ G +    +  VAVK        D + +F  E   + Q  H N+VRL+
Sbjct: 1   ERIGRGNFGEVFSGRLR-ADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 59

Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--GIAGGLFYLHEECCTQI 623
           G C + Q   +V E +  G   +FL  +  P  K++  I M    A G+ YL  + C   
Sbjct: 60  GVCTQKQPIYIVMELVQGGDFLTFLRTEG-PRLKVKELIQMVENAAAGMEYLESKHC--- 115

Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK----GYVAPEWFRNMP 679
           IH D+  +N L+ +    +ISDFG+++    ++     +  G K     + APE      
Sbjct: 116 IHRDLAARNCLVTEKNVLKISDFGMSR---EEEDGVYASTGGMKQIPVKWTAPEALNYGR 172

Query: 680 ITVKVDVYSYGVLLLEIICL 699
            + + DV+S+G+LL E   L
Sbjct: 173 YSSESDVWSFGILLWEAFSL 192

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 82.7 bits (204), Expect = 2e-17
 Identities = 62/197 (31%), Positives = 98/197 (49%), Gaps = 17/197 (8%)

Query: 508 ELGRGAFGTVYKGFVNMGSSN-HVAVKKLNSVFQDSEKEFKAEVNGIGQTHHK----NLV 562
           ELG G FG V KG   M      VA+K L     ++EK  + E+    +  H+     +V
Sbjct: 2   ELGSGNFGCVKKGVYKMRKKQIDVAIKVLK---NENEKSVRDEMMREAEIMHQLDNPYIV 58

Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFG--DSKPNWKLRTEIAMGIAGGLFYLHEECC 620
           R++G C E +  +LV E  S G +  FL G  D      +  E+   ++ G+ YL  +  
Sbjct: 59  RMIGVC-EAEALMLVMEMASGGPLNKFLSGKKDEITVSNV-VELMHQVSMGMKYLEGK-- 114

Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH--TNTAIRGTKGYVAPEWFRNM 678
              +H D+  +N+LL + + A+ISDFGL+K L  D S+    +A +    + APE     
Sbjct: 115 -NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFR 173

Query: 679 PITVKVDVYSYGVLLLE 695
             + + DV+SYG+ + E
Sbjct: 174 KFSSRSDVWSYGITMWE 190

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 82.3 bits (203), Expect = 2e-17
 Identities = 74/277 (26%), Positives = 124/277 (44%), Gaps = 43/277 (15%)

Query: 509 LGRGAFGTV----YKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           +G+G FG V    Y+G       N VAVK + +    + + F AE + + Q  H NLV+L
Sbjct: 14  IGKGEFGDVMLGDYRG-------NKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQL 64

Query: 565 LGYCDEGQNRL-LVYEFMSNGTVASFLF--GDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           LG   E +  L +V E+M+ G++  +L   G S        + ++ +   + YL      
Sbjct: 65  LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEA---N 121

Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT 681
             +H D+  +N+L+ +   A++SDFGL K  +  Q      ++ T    APE  R    +
Sbjct: 122 NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFS 177

Query: 682 VKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEN--DLEAM 739
            K DV+S+G+LL EI    R                  Y R   + +   VE    ++A 
Sbjct: 178 TKSDVWSFGILLWEIYSFGR----------------VPYPRIPLKDVVPRVEKGYKMDAP 221

Query: 740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV 776
           +    +   VM   W +  D + RP+  ++ + LE +
Sbjct: 222 DGCPPVVYDVMKQCWHL--DAATRPSFLQLREQLEHI 256

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 82.0 bits (202), Expect = 3e-17
 Identities = 61/197 (30%), Positives = 100/197 (50%), Gaps = 11/197 (5%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLL 565
           E LG+G FG V+KG   +     VAVK       Q+ + +F +E   + Q  H N+V+L+
Sbjct: 1   ELLGKGNFGEVFKG--TLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLI 58

Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR--TEIAMGIAGGLFYLHEECCTQI 623
           G C + Q   +V E +  G   SFL    K   K +   + A+  A G+ YL  + C   
Sbjct: 59  GVCTQRQPIYIVMELVPGGDFLSFL-RKKKDELKTKQLVKFALDAAAGMAYLESKNC--- 114

Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK-GYVAPEWFRNMPITV 682
           IH D+  +N L+ ++   +ISDFG+++    D  ++++ ++     + APE       + 
Sbjct: 115 IHRDLAARNCLVGENNVLKISDFGMSRQED-DGIYSSSGLKQIPIKWTAPEALNYGRYSS 173

Query: 683 KVDVYSYGVLLLEIICL 699
           + DV+SYG+LL E   L
Sbjct: 174 ESDVWSYGILLWETFSL 190

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 82.4 bits (203), Expect = 3e-17
 Identities = 61/194 (31%), Positives = 98/194 (50%), Gaps = 13/194 (6%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           E +G+G+FG VYKG  N  +   VA+K ++    +D  ++ + E+  + Q     + R  
Sbjct: 10  ERIGKGSFGEVYKGIDNR-TKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYY 68

Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM---GIAGGLFYLHEECCTQ 622
           G   +G    ++ E++  G+    L    KP     T IA     I  GL YLH E   +
Sbjct: 69  GSYLKGTKLWIIMEYLGGGSALDLL----KPGPLEETYIATILREILKGLDYLHSE---R 121

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH DIK  N+LL +  + +++DFG+A  LT  Q   NT + GT  ++APE  +      
Sbjct: 122 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDF 180

Query: 683 KVDVYSYGVLLLEI 696
           K D++S G+  +E+
Sbjct: 181 KADIWSLGITAIEL 194

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 81.8 bits (202), Expect = 4e-17
 Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 18/204 (8%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN------SVFQDSEKEFKAEVNGIGQTHHKN 560
           ++LG GAF + Y    ++ +   +AVK++       S  ++  +  + E+  + + +H +
Sbjct: 6   QQLGTGAFSSCY-QARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPH 64

Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFL--FGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
           ++R+LG   E  +  L  E+M+ G+V+  L  +G  K    +       +  GL YLHE 
Sbjct: 65  IIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIIN--YTEQLLRGLSYLHEN 122

Query: 619 CCTQIIHCDIKPQNILLDDH-YNARISDFGLAKLLTLDQSHTNT---AIRGTKGYVAPEW 674
              QIIH D+K  N+L+D      RI+DFG A  L    +        + GT  ++APE 
Sbjct: 123 ---QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEV 179

Query: 675 FRNMPITVKVDVYSYGVLLLEIIC 698
            R        DV+S G +++E+  
Sbjct: 180 LRGEQYGRSCDVWSVGCVIIEMAT 203

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 82.4 bits (204), Expect = 4e-17
 Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 12/199 (6%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRL 564
            ++G G +G VYK   +  +   VA+KK+   F+       A  E+  + + +H N+++L
Sbjct: 5   GKIGEGTYGVVYKAR-DKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKL 63

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSK--PNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           L       +  LV+EFM    +   +    +  P   +++ +   +  GL + H      
Sbjct: 64  LDVFRHKGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQ-LLQGLAFCHSH---G 118

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPI-T 681
           I+H D+KP+N+L++     +++DFGLA+          T    T+ Y APE        +
Sbjct: 119 ILHRDLKPENLLINTEGVLKLADFGLARSFGSPVR-PYTHYVVTRWYRAPELLLGDKGYS 177

Query: 682 VKVDVYSYGVLLLEIICLR 700
             VD++S G +  E++  R
Sbjct: 178 TPVDIWSVGCIFAELLSRR 196

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 82.1 bits (204), Expect = 4e-17
 Identities = 61/238 (25%), Positives = 105/238 (44%), Gaps = 62/238 (26%)

Query: 506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT--------- 556
            E+LG G +G VYK   +  +   VA+KK   +  D+E+E      GI  T         
Sbjct: 4   LEKLGEGTYGVVYKAR-DKKTGEIVALKK---IRLDNEEE------GIPSTALREISLLK 53

Query: 557 --HHKNLVRLLGYCDEGQNRLLVYEFMSN---------------GTVASFLFGDSKPNWK 599
              H N+V+LL      +   LV+E+                    + S ++        
Sbjct: 54  ELKHPNIVKLLDVIHTERKLYLVFEYCDMDLKKYLDKRPGPLSPNLIKSIMY-------- 105

Query: 600 LRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSH 658
              ++  G+A    Y H     +I+H D+KPQNIL++     +++DFGLA+   +  +++
Sbjct: 106 ---QLLRGLA----YCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTY 155

Query: 659 TNTAIRGTKGYVAPEWFRNMPI-TVKVDVYSYGVLLLEIICLRRNI---DNEISKVDK 712
           T+  +  T  Y APE        +  VD++S G +  E+I   + +   D+EI ++ K
Sbjct: 156 THEVV--TLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMI-TGKPLFPGDSEIDQLFK 210

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 82.3 bits (203), Expect = 4e-17
 Identities = 77/302 (25%), Positives = 131/302 (43%), Gaps = 61/302 (20%)

Query: 509 LGRGAFGTVYKGFV----NMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKNLVR 563
           LG G FG V K              VAVK L      SE ++  +E N + Q +H ++++
Sbjct: 8   LGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIK 67

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFL-----------------------FGDSKP-NWK 599
           L G C +    LL+ E+   G++ SFL                         D +     
Sbjct: 68  LYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMG 127

Query: 600 LRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT 659
                A  I+ G+ YL E    +++H D+  +N+L+ +    +ISDFGL++    D    
Sbjct: 128 DLISFAWQISRGMQYLAE---MKLVHRDLAARNVLVAEGRKMKISDFGLSR----DVYEE 180

Query: 660 NTAIRGTKG-----YVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEIS--KVDK 712
           ++ ++ +KG     ++A E   +   T + DV+S+GVLL EI+ L  N    I+  ++  
Sbjct: 181 DSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFN 240

Query: 713 AILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM 772
            + T +  +R          EN  E M N+ +          C +++P  RPT   +++ 
Sbjct: 241 LLKTGYRMER---------PENCSEEMYNLMLT---------CWKQEPDKRPTFADISKE 282

Query: 773 LE 774
           LE
Sbjct: 283 LE 284

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 82.0 bits (202), Expect = 5e-17
 Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 33/218 (15%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH---VAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKN 560
           F EELG  AFG +YKG + +   +H   VA+K L  +    +  EF+ E + + + HH N
Sbjct: 9   FMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPN 68

Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLF---------GDSKPNWKLRT--------E 603
           +V LLG   + Q   +++E+++ G +  FL            S  +  +++         
Sbjct: 69  IVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLH 128

Query: 604 IAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLD----QSH 658
           IA+ IA G+ YL        +H D+  +NIL+ +  + +ISD GL++ + + D    Q  
Sbjct: 129 IAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPK 185

Query: 659 TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEI 696
           +   IR    ++ PE       +   D++S+GV+L EI
Sbjct: 186 SLLPIR----WMPPEAIMYGKFSSDSDIWSFGVVLWEI 219

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 82.0 bits (202), Expect = 5e-17
 Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 29/214 (13%)

Query: 505 FKEELGRGAFGTVYKG-FVNMGSSNH---VAVKKLNSVFQDSEKEFKAEVNGIGQTHHKN 560
            K ELG GAFG V+     N+        VAVK L     ++ K+F  E   +    H++
Sbjct: 9   LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 68

Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASF---------LFGDSKPNWKLRT----EIAMG 607
           +V+  G C EG   ++V+E+M +G +  F         L  +     +L       IA  
Sbjct: 69  IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQ 128

Query: 608 IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLDQ----SHTNTA 662
           IA G+ YL  +     +H D+  +N L+ ++   +I DFG+++ + + D      HT   
Sbjct: 129 IAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 185

Query: 663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEI 696
           IR    ++ PE       T + DV+S GV+L EI
Sbjct: 186 IR----WMPPESIMYRKFTTESDVWSLGVVLWEI 215

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 81.3 bits (200), Expect = 6e-17
 Identities = 82/279 (29%), Positives = 127/279 (45%), Gaps = 45/279 (16%)

Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           +LG+G FG V+ G  N   +  VA+K L       E  F  E   + +  H  LV L   
Sbjct: 13  KLGQGCFGEVWMGTWN--GTTKVAIKTLKPGTMMPEA-FLQEAQIMKKLRHDKLVPLYAV 69

Query: 568 CDEGQNRLLVYEFMSNGTVASFLF-GDSKPNWKLR--TEIAMGIAGGLFYLHEECCTQII 624
             E +   +V EFM  G++  FL  GD K   KL    ++A  IA G+ Y+        I
Sbjct: 70  VSE-EPIYIVTEFMGKGSLLDFLKEGDGK-YLKLPQLVDMAAQIADGMAYIER---MNYI 124

Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMPIT 681
           H D++  NIL+ D+   +I+DFGLA+L+   + +  TA +G K    + APE       T
Sbjct: 125 HRDLRAANILVGDNLVCKIADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFT 181

Query: 682 VKVDVYSYGVLLLEIICLRR-----NIDNEI-SKVDKAILTDWAYDRYQERTLEALVEND 735
           +K DV+S+G+LL E++   R      ++ E+  +V++          Y+    +   E+ 
Sbjct: 182 IKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERG---------YRMPCPQGCPESL 232

Query: 736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
            E M               C ++DP  RPT   +   LE
Sbjct: 233 HELMKL-------------CWKKDPDERPTFEYIQSFLE 258

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 81.6 bits (201), Expect = 7e-17
 Identities = 61/217 (28%), Positives = 98/217 (45%), Gaps = 33/217 (15%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH----VAVKKLNSVFQDSEKEFKAEVNGIGQTHHKN 560
            K ELG GAFG V+    +          VAVK L    + + ++F+ E   +    H++
Sbjct: 9   LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQH 68

Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTE----------------I 604
           +VR  G C EG+  L+V+E+M +G +  FL     P+ K+                   I
Sbjct: 69  IVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHG-PDAKILAGGEDVAPGQLTLGQMLAI 127

Query: 605 AMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLDQ----SHT 659
           A  IA G+ YL        +H D+  +N L+      +I DFG+++ + + D       T
Sbjct: 128 ASQIASGMVYL---ASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 184

Query: 660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEI 696
              IR    ++ PE       T + D++S+GV+L EI
Sbjct: 185 MLPIR----WMPPESILYRKFTTESDIWSFGVVLWEI 217

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 80.6 bits (199), Expect = 8e-17
 Identities = 67/276 (24%), Positives = 121/276 (43%), Gaps = 40/276 (14%)

Query: 509 LGRGAFG--TVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGI---GQTHHKNLVR 563
           LG+GAFG  T+Y+        + + V K  ++ + SEKE +  +N I       H N++ 
Sbjct: 8   LGKGAFGEATLYR----RTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIA 63

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--GIAGGLFYLHEECCT 621
              +  +    L+  E+ + GT+   +       ++    +     I   + Y+H+    
Sbjct: 64  YYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA--- 120

Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT 681
            I+H DIK  NI L      ++ DFG++K+L  + S   T + GT  Y++PE  + +   
Sbjct: 121 GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVV-GTPYYMSPELCQGVKYN 179

Query: 682 VKVDVYSYGVLLLEIICLRRNID--NEISKVDKAILTDWA--YDRYQERTLEALVENDLE 737
            K D+++ G +L E++ L+R  D  N ++ V K +  ++      Y    L +LV +   
Sbjct: 180 FKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVSVYSSE-LISLVHS--- 235

Query: 738 AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQML 773
                             +Q+DP  RPT  +V    
Sbjct: 236 -----------------LLQQDPEKRPTADEVLDQP 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 80.2 bits (198), Expect = 1e-16
 Identities = 57/199 (28%), Positives = 90/199 (45%), Gaps = 17/199 (8%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT-------HHKNL 561
           LG+GAFG VY    ++ +   +AVK++   F     E K EVN +           H+ +
Sbjct: 10  LGQGAFGRVYL-CYDVDTGRELAVKQVP--FDPDSPETKKEVNALECEIQLLKNLQHERI 66

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           V+  G   + +   +  E+M  G+V   L         +  +    I  G+ YLH     
Sbjct: 67  VQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSN--- 123

Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR---GTKGYVAPEWFRNM 678
            I+H DIK  NIL D   N ++ DFG +K L    S   T ++   GT  +++PE     
Sbjct: 124 MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSG-TGMKSVTGTPYWMSPEVISGE 182

Query: 679 PITVKVDVYSYGVLLLEII 697
               K DV+S G  ++E++
Sbjct: 183 GYGRKADVWSVGCTVVEML 201

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 80.5 bits (198), Expect = 1e-16
 Identities = 55/191 (28%), Positives = 98/191 (51%), Gaps = 7/191 (3%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           E +G+G+FG V+KG  N  +   VA+K ++    +D  ++ + E+  + Q     + +  
Sbjct: 10  ERIGKGSFGEVFKGIDNR-TQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 68

Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           G   +G    ++ E++  G+    L       +++ T +   I  GL YLH E   + IH
Sbjct: 69  GSYLKGTKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKE-ILKGLDYLHSE---KKIH 124

Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            DIK  N+LL +  + +++DFG+A  LT  Q   NT + GT  ++APE  +      K D
Sbjct: 125 RDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQSAYDSKAD 183

Query: 686 VYSYGVLLLEI 696
           ++S G+  +E+
Sbjct: 184 IWSLGITAIEL 194

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 79.7 bits (197), Expect = 1e-16
 Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 11/197 (5%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNH--VAVKKLNS-VFQDSEKEFKAEVNGIGQTHHKNLVR 563
           ++LG G+FG V +G  +        VAVK L S    D   +F  E   +    H+NL+R
Sbjct: 1   KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIR 60

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYLHEECCT 621
           L G        ++V E    G++   L  D+  ++ + T  + A+ IA G+ YL  +   
Sbjct: 61  LYGVVLT-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK--- 116

Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH--TNTAIRGTKGYVAPEWFRNMP 679
           + IH D+  +NILL      +I DFGL + L  ++ H      ++    + APE  R   
Sbjct: 117 RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRT 176

Query: 680 ITVKVDVYSYGVLLLEI 696
            +   DV+ +GV L E+
Sbjct: 177 FSHASDVWMFGVTLWEM 193

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 80.6 bits (199), Expect = 1e-16
 Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 44/233 (18%)

Query: 500 EVTRG---FKEELGRGAFGTVYK----GFVNMGSSNHVAVKKL-NSVFQDSEKEFKAEVN 551
           E  R    +  ++G+GAFG V++    G +       VAVK L      D + +F+ E  
Sbjct: 1   EYPRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 60

Query: 552 GIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNW---------KLRT 602
            + +  H N+V+LLG C  G+   L++E+M+ G +  FL   S P             R 
Sbjct: 61  LMAEFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRS-PRAQCSLSHSTSSARK 119

Query: 603 E--------------IAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGL 648
                          IA  +A G+ YL E    + +H D+  +N L+ ++   +I+DFGL
Sbjct: 120 CGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGL 176

Query: 649 A-KLLTLD--QSHTNTA--IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEI 696
           +  + + D  ++  N A  IR    ++ PE       T + DV++YGV+L EI
Sbjct: 177 SRNIYSADYYKASENDAIPIR----WMPPESIFYNRYTTESDVWAYGVVLWEI 225

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 80.4 bits (198), Expect = 2e-16
 Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 32/217 (14%)

Query: 505 FKEELGRGAFGTVYKG-FVNMGSSNH---VAVKKLNSVFQDSEKEFKAEVNGIGQTHHKN 560
            K ELG GAFG V+     N+  +     VAVK L      + K+F+ E   +    H++
Sbjct: 9   LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 68

Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFG---------DSKP---NWKL----RTEI 604
           +V+  G C +G   ++V+E+M +G +  FL           D +P     +L       I
Sbjct: 69  IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 128

Query: 605 AMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLDQ----SHT 659
           A  IA G+ YL  +     +H D+  +N L+  +   +I DFG+++ + + D      HT
Sbjct: 129 ASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHT 185

Query: 660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEI 696
              IR    ++ PE       T + DV+S+GV+L EI
Sbjct: 186 MLPIR----WMPPESIMYRKFTTESDVWSFGVILWEI 218

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 79.1 bits (195), Expect = 3e-16
 Identities = 82/288 (28%), Positives = 129/288 (44%), Gaps = 44/288 (15%)

Query: 509 LGRGAFGTVYKG----FVNMGSS-NHVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLV 562
           LG GAFG VY+G     +  GS    VAVK L     D EK EF  E + +   +H N+V
Sbjct: 3   LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIV 62

Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFL-------FGDSKPNWKLRTEIAMGIAGGLFYL 615
           +LLG C   + + ++ E M  G + S+L       FG      K   +I + +A G  YL
Sbjct: 63  KLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYL 122

Query: 616 HEECCTQIIHCDIKPQNILLDDH-YNAR----ISDFGLAKLLTLDQSHTNTAIRGTK--- 667
            +      IH D+  +N L+ +  Y+A     I DFGLA+ +     +      G     
Sbjct: 123 EQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYR---KEGEGLLP 176

Query: 668 -GYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQER 726
             ++APE   +   T + DV+S+GVL+ EI+ L +     ++  +  +L    +     R
Sbjct: 177 VRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE--VL---QHVTAGGR 231

Query: 727 TLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
                    L+   N       +M   W   +DPS RPT  ++ ++L+
Sbjct: 232 ---------LQKPENCPDKIYQLMTNCW--AQDPSERPTFDRIQEILQ 268

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 79.3 bits (195), Expect = 5e-16
 Identities = 68/198 (34%), Positives = 104/198 (52%), Gaps = 16/198 (8%)

Query: 509 LGRGAFGTVYKG-FVNMGSSNH--VAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG GAFGTVYKG +V  G +    VA+K LN +    +  EF  E   +    H +LVRL
Sbjct: 15  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 74

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNW--KLRTEIAMGIAGGLFYLHEECCTQ 622
           LG C     +L V + M +G +  ++  + K N   +L     + IA G+ YL E    +
Sbjct: 75  LGVCLSPTIQL-VTQLMPHGCLLDYVH-EHKDNIGSQLLLNWCVQIAKGMMYLEER---R 129

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMP 679
           ++H D+  +N+L+    + +I+DFGLA+LL  D+   N    G K    ++A E      
Sbjct: 130 LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA--DGGKMPIKWMALECIHYRK 187

Query: 680 ITVKVDVYSYGVLLLEII 697
            T + DV+SYGV + E++
Sbjct: 188 FTHQSDVWSYGVTIWELM 205

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 78.8 bits (194), Expect = 5e-16
 Identities = 67/232 (28%), Positives = 103/232 (44%), Gaps = 31/232 (13%)

Query: 509 LGRGAFGTV----YKGFVNMGSSNHVAVKKLNSVFQDS----EKEFKAEVNGIGQTHHKN 560
           LG+G FG V     K    M +   +  K+L     +     EKE   +VN         
Sbjct: 1   LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSP------- 53

Query: 561 LVRLLGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHE 617
            +  L Y  E +  L LV   M+ G +   ++   +   ++   I  +  I  G+ +LH 
Sbjct: 54  FIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHS 113

Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                I++ D+KP+N+LLDD  N R+SD GLA  + L    T T   GT GY+APE  + 
Sbjct: 114 ---MDIVYRDMKPENVLLDDQGNCRLSDLGLA--VELKDGKTITQRAGTNGYMAPEILKE 168

Query: 678 MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLE 729
            P +  VD ++ G  + E++  R    +   KV K        +  + RTLE
Sbjct: 169 EPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAK--------EELKRRTLE 212

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 77.7 bits (192), Expect = 9e-16
 Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 27/204 (13%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
             + +G G +G VYK   ++ +   VA+K +     D  +  + E++ + +  H N+V  
Sbjct: 7   LIQRIGSGTYGDVYKA-RDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAY 65

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG---IA-------GGLFY 614
            G         +V E+   G++               T   +    IA        GL Y
Sbjct: 66  FGSYLRRDKLWIVMEYCGGGSLQDIY---------QVTRGPLSELQIAYVCRETLKGLAY 116

Query: 615 LHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEW 674
           LHE   T  IH DIK  NILL +  + +++DFG++  LT   +   + I GT  ++APE 
Sbjct: 117 LHE---TGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFI-GTPYWMAPEV 172

Query: 675 F---RNMPITVKVDVYSYGVLLLE 695
               R      K D+++ G+  +E
Sbjct: 173 AAVERKGGYDGKCDIWALGITAIE 196

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 78.3 bits (193), Expect = 9e-16
 Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 17/203 (8%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH---VAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F ++LG+G FG+V     +    N    VAVKKL     +  ++F+ E+  +    H N+
Sbjct: 8   FIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNI 67

Query: 562 VRLLGYC-DEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTE----IAMGIAGGLFYL 615
           V+  G C   G+  L LV E++  G++  +L    K   +L        A  I  G+ YL
Sbjct: 68  VKYKGVCYSAGRRNLRLVMEYLPYGSLRDYL---QKHRERLDHRKLLLYASQICKGMEYL 124

Query: 616 HEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG--YVAPE 673
             +     +H D+  +NIL++     +I DFGL K+L  D+ +      G     + APE
Sbjct: 125 GSKRY---VHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPE 181

Query: 674 WFRNMPITVKVDVYSYGVLLLEI 696
                  +V  DV+S+GV+L E+
Sbjct: 182 SLTESKFSVASDVWSFGVVLYEL 204

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 78.1 bits (192), Expect = 1e-15
 Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 34/219 (15%)

Query: 505 FKEELGRGAFGTVYKGFVNM-GSSNHVAVKKLNS-VFQDSEKEFKAEVNGIGQT-HHKNL 561
           F++ +G G FG V K  +   G     A+K++     +D  ++F  E+  + +  HH N+
Sbjct: 11  FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 70

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFG----DSKPNWKLRTEIA------------ 605
           + LLG C+      L  E+  +G +  FL      ++ P + +    A            
Sbjct: 71  INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 130

Query: 606 MGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRG 665
             +A G+ YL ++   Q IH D+  +NIL+ ++Y A+I+DFGL++            ++ 
Sbjct: 131 ADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR-------GQEVYVKK 180

Query: 666 TKGYVAPEWFR----NMPI-TVKVDVYSYGVLLLEIICL 699
           T G +   W      N  + T   DV+SYGVLL EI+ L
Sbjct: 181 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSL 219

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 77.5 bits (191), Expect = 2e-15
 Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 27/203 (13%)

Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEK--EFKAEVNGIGQTHHKNLVRLL 565
           ELG GAFG VYK   +  +    A K +    +  E+  +F  E++ + +  H N+V L 
Sbjct: 12  ELGDGAFGKVYKA-QHKETGLFAAAKIIQ--IESEEELEDFMVEIDILSECKHPNIVGLY 68

Query: 566 -GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTE-----IAMGIAGGLFYLHEEC 619
             Y  E +  +L+ EF   G + S +    +      TE     +   +   L +LH   
Sbjct: 69  EAYFYENKLWILI-EFCDGGALDSIMLELERG----LTEPQIRYVCRQMLEALNFLHSH- 122

Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGL-AKLLTLDQSHTNTAIRGTKGYVAP-----E 673
             ++IH D+K  NILL    + +++DFG+ AK  +  Q   +T I GT  ++AP     E
Sbjct: 123 --KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKR-DTFI-GTPYWMAPEVVACE 178

Query: 674 WFRNMPITVKVDVYSYGVLLLEI 696
            F++ P   K D++S G+ L+E+
Sbjct: 179 TFKDNPYDYKADIWSLGITLIEL 201

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 76.9 bits (190), Expect = 2e-15
 Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 22/204 (10%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHV----AVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           + +GA+G V+       S+  +     +KK + + ++   +   E + + Q     +V+L
Sbjct: 1   ISKGAYGRVF--LAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKL 58

Query: 565 LGYCDEGQNRL-LVYEFMSNGTVASFL--FGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
             Y  +G+  L LV E++  G +AS L   G S      R  IA  I   L YLH     
Sbjct: 59  Y-YSFQGKKNLYLVMEYLPGGDLASLLENVG-SLDEDVARIYIAE-IVLALEYLHS---N 112

Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKL----LTLDQSHTNTAIR---GTKGYVAPEW 674
            IIH D+KP NIL+D + + +++DFGL+K+      ++ +      +   GT  Y+APE 
Sbjct: 113 GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEV 172

Query: 675 FRNMPITVKVDVYSYGVLLLEIIC 698
                 +  VD +S G +L E + 
Sbjct: 173 ILGQGHSKTVDWWSLGCILYEFLV 196

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 77.0 bits (190), Expect = 2e-15
 Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 16/203 (7%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVR 563
             E +G GA   VY     + ++  VA+K+++    Q S  E + EV  + Q +H N+V+
Sbjct: 5   LIEVIGVGATAVVYAAIC-LPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVK 63

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTE--IAM---GIAGGLFYLHEE 618
                  G    LV  ++S G++   +   S        E  IA     +  GL YLH  
Sbjct: 64  YYTSFVVGDELWLVMPYLSGGSLLDIM--KSSYPRGGLDEAIIATVLKEVLKGLEYLHSN 121

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLL---TLDQSHTNTAIRGTKGYVAPEWF 675
                IH DIK  NILL +  + +I+DFG++  L               GT  ++APE  
Sbjct: 122 ---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVM 178

Query: 676 RNMP-ITVKVDVYSYGVLLLEII 697
             +     K D++S+G+  +E+ 
Sbjct: 179 EQVHGYDFKADIWSFGITAIELA 201

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 77.2 bits (190), Expect = 2e-15
 Identities = 76/248 (30%), Positives = 114/248 (45%), Gaps = 26/248 (10%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKLNSVFQDSEKEFKA---EVNGIGQTHHKNLVRL 564
           LG+G FG V      M ++  + A KKLN       K ++    E   + + H + +V L
Sbjct: 1   LGKGGFGEVSA--CQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSL 58

Query: 565 LGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAM----GIAGGLFYLHEEC 619
             Y  + +  L LV   M+ G +   ++   + N       A      I  GL +LH+  
Sbjct: 59  -AYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR- 116

Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP 679
             +II+ D+KP+N+LLD+  N RISD GLA  L   QS T     GT G++APE  +   
Sbjct: 117 --RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTK-GYAGTPGFMAPELLQGEE 173

Query: 680 ITVKVDVYSYGVLLLEIICLR-----RNIDNEISKVDKAILTDWAY--DRYQERT---LE 729
               VD ++ GV L E+I  R     R    E  ++ + IL D     D++   +    E
Sbjct: 174 YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCE 233

Query: 730 ALVENDLE 737
           AL+  D E
Sbjct: 234 ALLAKDPE 241

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 77.4 bits (191), Expect = 2e-15
 Identities = 64/214 (29%), Positives = 103/214 (48%), Gaps = 21/214 (9%)

Query: 493 FTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNS-VFQDSEKEFKAEVN 551
           FT ++L +       E+GRGAFGTV K  ++  S   +AVK++ S V +  +K    +++
Sbjct: 1   FTAEDLKD-----LGEIGRGAFGTVNK-MLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLD 54

Query: 552 GIGQTHH-KNLVRLLGYC-DEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI----A 605
            + ++     +V+  G    EG +  +  E M       + +        +  EI    A
Sbjct: 55  VVMRSSDCPYIVKFYGALFREG-DCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIA 113

Query: 606 MGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRG 665
           +     L YL EE   +IIH D+KP NILLD + N ++ DFG++  L    + T  A  G
Sbjct: 114 VATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAKTRDA--G 169

Query: 666 TKGYVAPEW---FRNMPITVKVDVYSYGVLLLEI 696
            + Y+APE           V+ DV+S G+ L E+
Sbjct: 170 CRPYMAPERIDPSARDGYDVRSDVWSLGITLYEV 203

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 77.0 bits (189), Expect = 2e-15
 Identities = 58/194 (29%), Positives = 99/194 (51%), Gaps = 13/194 (6%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           E++G+G+FG V+KG  N  +   VA+K ++    +D  ++ + E+  + Q     + +  
Sbjct: 10  EKIGKGSFGEVFKGIDNR-TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 68

Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM---GIAGGLFYLHEECCTQ 622
           G   +     ++ E++  G+    L    +P     T+IA     I  GL YLH E   +
Sbjct: 69  GSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSE---K 121

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH DIK  N+LL +H   +++DFG+A  LT  Q   NT + GT  ++APE  +      
Sbjct: 122 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDS 180

Query: 683 KVDVYSYGVLLLEI 696
           K D++S G+  +E+
Sbjct: 181 KADIWSLGITAIEL 194

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 77.2 bits (191), Expect = 2e-15
 Identities = 59/201 (29%), Positives = 92/201 (45%), Gaps = 19/201 (9%)

Query: 505 FKEELGRGAFGTV----YKGFVNMGSSNHVAVKKLNS---VFQDSEKEFKAEVNGIGQTH 557
           F + LG G+FG V    +KG     S  + A+K L+    V     +    E   +    
Sbjct: 5   FIKTLGTGSFGRVMLVRHKG-----SGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIR 59

Query: 558 HKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           H  LV L G   +  N  LV E++  G + S L    +    +    A  +   L YLH 
Sbjct: 60  HPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHS 119

Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                I++ D+KP+N+LLD     +I+DFG AK +   +  T T + GT  Y+APE   +
Sbjct: 120 L---DIVYRDLKPENLLLDSDGYIKITDFGFAKRV---KGRTYT-LCGTPEYLAPEIILS 172

Query: 678 MPITVKVDVYSYGVLLLEIIC 698
                 VD ++ G+L+ E++ 
Sbjct: 173 KGYGKAVDWWALGILIYEMLA 193

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 79.9 bits (197), Expect = 4e-15
 Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 18/187 (9%)

Query: 526 SSNHVAVKKLNSVFQDSEKE---FKAEVNGIGQTHHKNLVRLLGYCDEGQNRLL-VYEFM 581
           + + VA+K L +   + E +   F+ E     + +H N+V LL   +     L  V+E++
Sbjct: 2   TGHEVAIKLLRTDAPEEEHQRARFRRETALCARLYHPNIVALLDSGEAPPGLLFAVFEYV 61

Query: 582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILL---DDH 638
              T+   L  D          + + +   L   H +    I+H D+KPQNI++      
Sbjct: 62  PGRTLREVLAADGALPAGETGRLMLQVLDALACAHNQ---GIVHRDLKPQNIMVSQTGVR 118

Query: 639 YNARISDFGLAKLL-----TLDQSHTNTA-IRGTKGYVAPEWFRNMPITVKVDVYSYGVL 692
            +A++ DFG+  LL         + T T  + GT  Y APE  R  P+T   D+Y++G++
Sbjct: 119 PHAKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLYAWGLI 178

Query: 693 LLEIICL 699
            LE  CL
Sbjct: 179 FLE--CL 183

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 76.2 bits (188), Expect = 4e-15
 Identities = 60/211 (28%), Positives = 90/211 (42%), Gaps = 41/211 (19%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRL 564
             +G GA+G V K   N  +   VA+KK      D + +  A  EV  + Q  H+N+V L
Sbjct: 7   GVVGEGAYGVVLKC-RNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNL 65

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPN-----------WKLRTEIAMGIAGGLF 613
                      LV+E++   T+   L  ++ P            W+L   IA        
Sbjct: 66  KEAFRRKGRLYLVFEYVER-TLLELL--EASPGGLPPDAVRSYIWQLLQAIA-------- 114

Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE 673
           Y H      IIH DIKP+NIL+ +    ++ DFG A+ L         A   T  YVA  
Sbjct: 115 YCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARAL-----RARPASPLTD-YVATR 165

Query: 674 WFRNMPITVK-------VDVYSYGVLLLEII 697
           W+R   + V        VDV++ G ++ E++
Sbjct: 166 WYRAPELLVGDTNYGKPVDVWAIGCIMAELL 196

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 75.6 bits (186), Expect = 7e-15
 Identities = 56/196 (28%), Positives = 96/196 (48%), Gaps = 11/196 (5%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQTHH---KNLV 562
           E +GRGA+G VY+G  ++ +   VA+K +N    D +  + + EV  + Q       N+ 
Sbjct: 7   ELIGRGAYGAVYRG-KHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNIT 65

Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           +  G   +G    ++ E+   G+V + L        K  + I   +   L Y+H+     
Sbjct: 66  KYYGSYLKGPRLWIIMEYAEGGSVRT-LMKAGPIAEKYISVIIREVLVALKYIHK---VG 121

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN-MPIT 681
           +IH DIK  NIL+ +  N ++ DFG+A LL  + S  +T + GT  ++APE         
Sbjct: 122 VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFV-GTPYWMAPEVITEGKYYD 180

Query: 682 VKVDVYSYGVLLLEII 697
            K D++S G+ + E+ 
Sbjct: 181 TKADIWSLGITIYEMA 196

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 75.1 bits (184), Expect = 8e-15
 Identities = 63/211 (29%), Positives = 105/211 (49%), Gaps = 17/211 (8%)

Query: 497 ELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT 556
           E+   +   +++LG G FG V+    N  +   V   K  S+   S + F AE N +   
Sbjct: 2   EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM---SVEAFLAEANVMKTL 58

Query: 557 HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLF---GDSKPNWKLRTEIAMGIAGGLF 613
            H  LV+L     + +   ++ EFM+ G++  FL    G  +P  KL  + +  IA G+ 
Sbjct: 59  QHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL-IDFSAQIAEGMA 116

Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYV 670
           ++ +      IH D++  NIL+      +I+DFGLA+++   + +  TA  G K    + 
Sbjct: 117 FIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVI---EDNEYTAREGAKFPIKWT 170

Query: 671 APEWFRNMPITVKVDVYSYGVLLLEIICLRR 701
           APE       T+K DV+S+G+LL+EI+   R
Sbjct: 171 APEAINFGSFTIKSDVWSFGILLMEIVTYGR 201

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 75.1 bits (184), Expect = 1e-14
 Identities = 65/197 (32%), Positives = 95/197 (48%), Gaps = 17/197 (8%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH-----HKNLVR 563
           LG+G FG V    V   +    A KKL    +   K+ K E   + +       +   V 
Sbjct: 8   LGKGGFGEVCACQVR-ATGKMYACKKLE---KKRIKKRKGESMALNEKQILEKVNSRFVV 63

Query: 564 LLGYCDEGQNRL-LVYEFMSNGTVASFLF--GDSKPNWKLRTEIAMGIAGGLFYLHEECC 620
            L Y  E ++ L LV   M+ G +   ++  G++          A  I  GL  LH+E  
Sbjct: 64  SLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE-- 121

Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPI 680
            +I++ D+KP+NILLDDH + RISD GLA  + + +  T     GT GY+APE  +N   
Sbjct: 122 -RIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRVGTVGYMAPEVVKNERY 178

Query: 681 TVKVDVYSYGVLLLEII 697
           T   D ++ G LL E+I
Sbjct: 179 TFSPDWWALGCLLYEMI 195

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 74.8 bits (184), Expect = 1e-14
 Identities = 72/290 (24%), Positives = 118/290 (40%), Gaps = 50/290 (17%)

Query: 502 TRGFKEE--LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA----EVNGIGQ 555
              FK E  +G+G F  VYK  + +     VA+KK+  +F+  + + +     E++ + Q
Sbjct: 1   LGNFKIEKKIGKGQFSVVYKA-ICLLDGRVVALKKVQ-IFEMMDAKARQDCLKEIDLLKQ 58

Query: 556 THHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIA-----MGIAG 610
             H N+++ L    E     +V E    G + S +    K   +L  E       + +  
Sbjct: 59  LDHPNVIKYLASFIENNELNIVLELADAGDL-SRMIKHFKKQKRLIPERTIWKYFVQLCS 117

Query: 611 GLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA--IRGTKG 668
            L ++H +   +I+H DIKP N+ +      ++ D GL +  +   S T  A  + GT  
Sbjct: 118 ALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFS---SKTTAAHSLVGTPY 171

Query: 669 YVAPEWFRNMPITVKVDVYSYGVLLLEIICLRR-------NIDNEISKVDKAILTDWAYD 721
           Y++PE         K D++S G LL E+  L+        N+ +   K++K        D
Sbjct: 172 YMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPAD 231

Query: 722 RYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ 771
            Y E  L  LV                      CI  DP  RP +  V Q
Sbjct: 232 HYSEE-LRDLVSR--------------------CINPDPEKRPDISYVLQ 260

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 74.5 bits (183), Expect = 1e-14
 Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 11/194 (5%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYC 568
           LG+G +G VY    ++ +   +A+K++        +    E+       H+N+V+ LG  
Sbjct: 16  LGKGTYGIVYAA-RDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSD 74

Query: 569 DEGQNRLLVYEFMSNGTVASFL---FGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
            E     +  E +  G++++ L   +G  K N +        I  GL YLH+    QI+H
Sbjct: 75  SENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVH 131

Query: 626 CDIKPQNILLDDHYNA-RISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP--ITV 682
            DIK  N+L++ +    +ISDFG +K L      T T   GT  Y+APE     P     
Sbjct: 132 RDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTET-FTGTLQYMAPEVIDKGPRGYGA 190

Query: 683 KVDVYSYGVLLLEI 696
             D++S G  ++E+
Sbjct: 191 PADIWSLGCTIVEM 204

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 75.6 bits (186), Expect = 1e-14
 Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 30/212 (14%)

Query: 495 YKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS-EKEFKAEVNGI 553
             EL  V R     +G GA GTVYK  ++  +    A+K +    +D+  ++   E+  +
Sbjct: 73  LSELERVNR-----IGSGAGGTVYK-VIHRPTGRLYALKVIYGNHEDTVRRQICREIEIL 126

Query: 554 GQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLF 613
              +H N+V+     D      ++ EFM  G++      D +       ++A  I  G+ 
Sbjct: 127 RDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTHIADEQ----FLADVARQILSGIA 182

Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE 673
           YLH      I+H DIKP N+L++   N +I+DFG++++L       N+++ GT  Y++PE
Sbjct: 183 YLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSV-GTIAYMSPE 238

Query: 674 WFRNMPITVKV----------DVYSYGVLLLE 695
                 I   +          D++S GV +LE
Sbjct: 239 -----RINTDLNHGAYDGYAGDIWSLGVSILE 265

Length = 353

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 74.6 bits (183), Expect = 1e-14
 Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 30/205 (14%)

Query: 509 LGRGAFGTVYKGF-VNMGSSNH--VAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG G FGTV+KG  +  G S    VA+K + +   + + +E    +  +G   H  +VRL
Sbjct: 15  LGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRL 74

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLF---GDSKP----NWKLRTEIAMGIAGGLFYLHE 617
           LG C  G +  LV +    G++   +        P    NW ++      IA G++YL E
Sbjct: 75  LGIC-PGASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQ------IAKGMYYLEE 127

Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ-----SHTNTAIRGTKGYVAP 672
                ++H ++  +NILL      +I+DFG+A LL  D      S   T I+    ++A 
Sbjct: 128 HR---MVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIK----WMAL 180

Query: 673 EWFRNMPITVKVDVYSYGVLLLEII 697
           E       T + DV+SYGV + E++
Sbjct: 181 ESILFGRYTHQSDVWSYGVTVWEMM 205

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 74.5 bits (184), Expect = 2e-14
 Identities = 62/227 (27%), Positives = 93/227 (40%), Gaps = 43/227 (18%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT-----------H 557
           LG G +  VYK      +   VA+KK+         E K   +GI  T            
Sbjct: 8   LGEGTYAVVYKARDKE-TGRIVAIKKIKL------GERKEAKDGINFTALREIKLLQELK 60

Query: 558 HKNLVRLLGYCDEGQNRLLVYEFMS-------NGTVASFLFGDSKPNWKLRTEIAMGIAG 610
           H N++ LL       N  LV+EFM                  D K          +    
Sbjct: 61  HPNIIGLLDVFGHKSNINLVFEFMETDLEKVIKDKSIVLTPADIK-------SYMLMTLR 113

Query: 611 GLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLL-TLDQSHTNTAIRGTKGY 669
           GL YLH      I+H D+KP N+L+      +++DFGLA+   + ++  T+  +  T+ Y
Sbjct: 114 GLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVV--TRWY 168

Query: 670 VAPE-WFRNMPITVKVDVYSYGVLLLEIICLRRNI---DNEISKVDK 712
            APE  F      V VD++S G +  E + LR      D++I ++ K
Sbjct: 169 RAPELLFGARHYGVGVDMWSVGCIFAE-LLLRVPFLPGDSDIDQLGK 214

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 74.6 bits (183), Expect = 2e-14
 Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 38/226 (16%)

Query: 505 FKEELGRGAFGTVY-------KGFVNMGSS------NHVAVKKLNS-VFQDSEKEFKAEV 550
            KE+LG G FG V+         F+  G+         VAVK L + V + +  +F  E+
Sbjct: 9   LKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEI 68

Query: 551 NGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFL----------FGDSKPNWKL 600
             + +  + N++RLLG C       ++ E+M NG +  FL            ++ P+  +
Sbjct: 69  KIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSI 128

Query: 601 RTEIAMG--IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLD-- 655
              + M   IA G+ YL        +H D+  +N L+ +HY  +I+DFG+++ L + D  
Sbjct: 129 ANLLYMAVQIASGMKYL---ASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYY 185

Query: 656 --QSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
             Q      IR    ++A E       T   DV+++GV L E+  L
Sbjct: 186 RIQGRAVLPIR----WMAWESILLGKFTTASDVWAFGVTLWEMFTL 227

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 73.8 bits (182), Expect = 2e-14
 Identities = 56/193 (29%), Positives = 86/193 (44%), Gaps = 9/193 (4%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHV--AVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           LG G FG V    V   +       VKK + V    ++   +E   + + +H  +V+L  
Sbjct: 1   LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYR 60

Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSK-PNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
              + +   ++ E+   G + + L        +  R  IA  +     YLH      II+
Sbjct: 61  TFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIAC-VVLAFEYLHNR---GIIY 116

Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D+KP+N+LLD +   ++ DFG AK L      T T   GT  YVAPE   N      VD
Sbjct: 117 RDLKPENLLLDSNGYVKLVDFGFAKKLK-SGQKTWTFC-GTPEYVAPEIILNKGYDFSVD 174

Query: 686 VYSYGVLLLEIIC 698
            +S G+LL E++ 
Sbjct: 175 YWSLGILLYELLT 187

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 74.2 bits (182), Expect = 2e-14
 Identities = 77/288 (26%), Positives = 122/288 (42%), Gaps = 30/288 (10%)

Query: 507 EELGRGAFGTV----YKGFVNMGSSNHVAVKKLNS-VFQDSEKEFKAEVNGIGQTHHKNL 561
             LG G FG V    Y    N G+   VAVK L     Q +   +K E+N +   +H+N+
Sbjct: 10  RVLGEGHFGKVSLYCYDP-ANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENI 68

Query: 562 VRLLGYCDE--GQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTE----IAMGIAGGLFYL 615
           V+  G C E  G+   L+ E++  G++  +L     P  KL        A  I  G+ YL
Sbjct: 69  VKYKGCCSEQGGKGLQLIMEYVPLGSLRDYL-----PKHKLNLAQLLLFAQQICEGMAYL 123

Query: 616 HEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG--YVAPE 673
           H +     IH D+  +N+LLD+    +I DFGLAK +     +      G     + A E
Sbjct: 124 HSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVE 180

Query: 674 WFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAI-LTDWAYDRYQERTLEALV 732
             +    +   DV+S+GV L E++    + D++ S   K   +      +     L  L+
Sbjct: 181 CLKENKFSYASDVWSFGVTLYELLT---HCDSKQSPPKKFEEMIGPKQGQMTVVRLIELL 237

Query: 733 END--LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
           E    L    N       +M   W  + +   RPT R +  +L+ +  
Sbjct: 238 ERGMRLPCPKNCPQEVYILMKNCW--ETEAKFRPTFRSLIPILKEMHH 283

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 74.0 bits (181), Expect = 3e-14
 Identities = 52/191 (27%), Positives = 98/191 (51%), Gaps = 6/191 (3%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           E++G+GA GTVY   +++ +   VA+K++N   Q  ++    E+  + +  + N+V  L 
Sbjct: 25  EKIGQGASGTVYTA-IDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLD 83

Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHC 626
               G    +V E+++ G++   +        ++   +       L +LH     Q+IH 
Sbjct: 84  SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI-AAVCRECLQALDFLHS---NQVIHR 139

Query: 627 DIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDV 686
           DIK  NILL    + +++DFG    +T +QS  +T + GT  ++APE         KVD+
Sbjct: 140 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDI 198

Query: 687 YSYGVLLLEII 697
           +S G++ +E++
Sbjct: 199 WSLGIMAIEMV 209

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 73.7 bits (181), Expect = 3e-14
 Identities = 62/222 (27%), Positives = 100/222 (45%), Gaps = 30/222 (13%)

Query: 493 FTYKELVEVTRGFKEELGRGAFGTVY----KGFVNMGSSNHVAVKKLNSV-FQDSEKEFK 547
           F    L E+T      LGRG FG V+    KG    G    V VK L     ++ + EF+
Sbjct: 2   FPRSNLQEIT-----TLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFR 56

Query: 548 AEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKL------- 600
            E++   +  HKN+VRLLG C E +   ++ E+   G +  FL      + KL       
Sbjct: 57  RELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLST 116

Query: 601 --RTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ-- 656
             +  +   IA G+ +L      + +H D+  +N L+      ++S   L+K +   +  
Sbjct: 117 KQKVALCTQIALGMDHLSN---ARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYY 173

Query: 657 SHTNTAI--RGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEI 696
              N  I  R    ++APE  +    + K DV+S+GVL+ E+
Sbjct: 174 KLRNALIPLR----WLAPEAVQEDDFSTKSDVWSFGVLMWEV 211

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 73.5 bits (180), Expect = 4e-14
 Identities = 56/195 (28%), Positives = 97/195 (49%), Gaps = 11/195 (5%)

Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           ELG GAFG VYK   N  +    A K +++  ++  +++  E++ +    H N+V+LL  
Sbjct: 12  ELGDGAFGKVYKA-QNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 70

Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIA-MGIAGGLFYLHEECCTQIIHC 626
                N  ++ EF + G V + +    +P  + +  +        L YLHE    +IIH 
Sbjct: 71  FYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHE---NKIIHR 127

Query: 627 DIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF-----RNMPIT 681
           D+K  NIL     + +++DFG++   T      ++ I GT  ++APE       ++ P  
Sbjct: 128 DLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI-GTPYWMAPEVVMCETSKDRPYD 186

Query: 682 VKVDVYSYGVLLLEI 696
            K DV+S G+ L+E+
Sbjct: 187 YKADVWSLGITLIEM 201

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 73.0 bits (179), Expect = 4e-14
 Identities = 59/211 (27%), Positives = 91/211 (43%), Gaps = 30/211 (14%)

Query: 507 EELGRGAFGTVYKGFVNMG-SSNHVAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           +E+G G FG V  G  + G S   V VK+L  S   D +  F  EV    + +H N+++ 
Sbjct: 1   DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQC 60

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFL-------FGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           LG C E    LLV EF   G + ++L          ++ +   R  +A  +A GL +LH+
Sbjct: 61  LGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQR--MACEVASGLLWLHQ 118

Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEW--- 674
                 IH D+  +N  L    + +I D+GLA    L+Q   +  I      V   W   
Sbjct: 119 ---ADFIHSDLALRNCQLTADLSVKIGDYGLA----LEQYPEDYYITKDCHAVPLRWLAP 171

Query: 675 ---------FRNMPITVKVDVYSYGVLLLEI 696
                          T K +++S GV + E+
Sbjct: 172 ELVEIRGQDLLPKDQTKKSNIWSLGVTMWEL 202

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 73.9 bits (182), Expect = 4e-14
 Identities = 58/202 (28%), Positives = 90/202 (44%), Gaps = 25/202 (12%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE--KEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G V   F +  +   VA+KKL+  FQ +   K    E+  +    H+N++ LL 
Sbjct: 23  VGSGAYGQVCSAF-DTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLD 81

Query: 567 -YC-----DEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
            +      ++ Q+  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 82  VFTPASSLEDFQDVYLVTHLMGADLNNIVKCQKLSDDHIQF-----LVYQILRGLKYIHS 136

Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP NI +++    +I DFGLA+          T    T+ Y APE   N
Sbjct: 137 ---AGIIHRDLKPSNIAVNEDCELKILDFGLARHT----DDEMTGYVATRWYRAPEIMLN 189

Query: 678 -MPITVKVDVYSYGVLLLEIIC 698
            M     VD++S G ++ E++ 
Sbjct: 190 WMHYNQTVDIWSVGCIMAELLT 211

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 73.0 bits (179), Expect = 5e-14
 Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 20/206 (9%)

Query: 509 LGRGAFGTVYKGFVNM--GSSNHVAVKKLNS-VFQDSE-KEFKAEVNGIGQTHHKNLVRL 564
           LG+G FG+V +  +    GS   VAVK L + +F  S+ +EF  E   + +  H N+++L
Sbjct: 7   LGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKL 66

Query: 565 LGYC--DEGQNRL----LVYEFMSNGTVASFLF----GDSKPNWKLRT--EIAMGIAGGL 612
           +G       + RL    ++  FM +G + +FL     G+      L+T     + IA G+
Sbjct: 67  IGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGM 126

Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLA-KLLTLDQSHTNTAIRGTKGYVA 671
            YL  +     IH D+  +N +L+++    ++DFGL+ K+ + D      A +    ++A
Sbjct: 127 EYLSSK---NFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLA 183

Query: 672 PEWFRNMPITVKVDVYSYGVLLLEII 697
            E   +   T   DV+++GV + EI+
Sbjct: 184 LESLADNVYTTHSDVWAFGVTMWEIM 209

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 72.6 bits (178), Expect = 5e-14
 Identities = 72/278 (25%), Positives = 123/278 (44%), Gaps = 33/278 (11%)

Query: 509 LGRGAFGTVYKGFVNMGSSNH--VAVKKLNSVFQDSEKE-FKAEVNGIGQTHHKNLVRLL 565
           LG G FG + +G + + S     VA+  L +   D ++  F AE   +GQ  H N+VRL 
Sbjct: 13  LGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLE 72

Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM----GIAGGLFYLHEECCT 621
           G    G   ++V E+MSNG + SFL    K   +L     M    G+A G+ YL E    
Sbjct: 73  GVITRGNTMMIVTEYMSNGALDSFL---RKHEGQLVAGQLMGMLPGLASGMKYLSE---M 126

Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT 681
             +H  +    +L++     +IS F   +    +  +T  + +    + APE  +    +
Sbjct: 127 GYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFS 186

Query: 682 VKVDVYSYGVLLLEIICL--RRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM 739
              DV+S+G+++ E++    R   D     V KA+      D ++   L A         
Sbjct: 187 SASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAV-----EDGFR---LPAPR------- 231

Query: 740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV 777
           N   +LH+ ++    C Q++   RP   ++  +L  +V
Sbjct: 232 NCPNLLHQLMLD---CWQKERGERPRFSQIHSILSKMV 266

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 73.0 bits (179), Expect = 6e-14
 Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 26/201 (12%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           E++G+GA GTVY   +++ +   VA+K++N   Q  ++    E+  + +  H N+V  L 
Sbjct: 25  EKIGQGASGTVYTA-IDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLD 83

Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG---IAG-------GLFYLH 616
               G    +V E+++ G++   +           TE  M    IA         L +LH
Sbjct: 84  SYLVGDELWVVMEYLAGGSLTDVV-----------TETCMDEGQIAAVCRECLQALEFLH 132

Query: 617 EECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR 676
                Q+IH DIK  NILL    + +++DFG    +T +QS  +T + GT  ++APE   
Sbjct: 133 SN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVT 188

Query: 677 NMPITVKVDVYSYGVLLLEII 697
                 KVD++S G++ +E++
Sbjct: 189 RKAYGPKVDIWSLGIMAIEMV 209

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 73.1 bits (179), Expect = 7e-14
 Identities = 73/279 (26%), Positives = 115/279 (41%), Gaps = 50/279 (17%)

Query: 509 LGRGAFGTVYKGFVNMGSSN---HVAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG GAFGTVYKG            VA+K+L  +    + KE   E   +    + ++ RL
Sbjct: 15  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 74

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASF-------LFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           LG C     +L + + M  G +  +       +      NW ++      IA G+ YL E
Sbjct: 75  LGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ------IAKGMNYLEE 127

Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
               +++H D+  +N+L+    + +I+DFGLAKLL  D+           G V  +W   
Sbjct: 128 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEK----EYHAEGGKVPIKWMAL 180

Query: 678 MPI-----TVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALV 732
             I     T + DV+SYGV + E++                      YD      + +++
Sbjct: 181 ESILHRIYTHQSDVWSYGVTVWELMTFGSK----------------PYDGIPASEISSIL 224

Query: 733 END--LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKV 769
           E    L      T+    +MV  W I  D   RP  R++
Sbjct: 225 EKGERLPQPPICTIDVYMIMVKCWMI--DADSRPKFREL 261

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 71.7 bits (176), Expect = 8e-14
 Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 21/199 (10%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE---FKAE-VNGIGQTHHKNLV 562
           + + +GAFG+VY       + ++ A+K L      ++ +    KAE    + Q     + 
Sbjct: 2   KPISKGAFGSVYLA-KKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVA 60

Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFL--FGDSKPNW--KLRTEIAMGIAGGLFYLHEE 618
           +L           LV E+++ G  AS +   G    +W  +   E+ +G+      LH+ 
Sbjct: 61  KLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVE----DLHQR 116

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               IIH DIKP+N+L+D   + +++DFGL++         N    GT  Y+APE    +
Sbjct: 117 ---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-----NKKFVGTPDYLAPETILGV 168

Query: 679 PITVKVDVYSYGVLLLEII 697
                 D +S G ++ E +
Sbjct: 169 GDDKMSDWWSLGCVIFEFL 187

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 71.7 bits (175), Expect = 1e-13
 Identities = 64/206 (31%), Positives = 100/206 (48%), Gaps = 24/206 (11%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQ-THHKNLVRLL 565
           E +G G +G VYKG      +  +A  K+  V  D E+E K E+N + + +HH+N+    
Sbjct: 12  ELVGNGTYGQVYKG--RHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYY 69

Query: 566 GYCDEGQ------NRLLVYEFMSNGTVASFLFGDSKPNWKLRTE----IAMGIAGGLFYL 615
           G   +           LV EF   G+V   L  ++K N  L+ E    I   I  GL +L
Sbjct: 70  GAFIKKNPPGMDDQLWLVMEFCGAGSVTD-LIKNTKGN-TLKEEWIAYICREILRGLSHL 127

Query: 616 HEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF 675
           H+    ++IH DIK QN+LL ++   ++ DFG++  L       NT I GT  ++APE  
Sbjct: 128 HQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAPEVI 183

Query: 676 R-----NMPITVKVDVYSYGVLLLEI 696
                 +     K D++S G+  +E+
Sbjct: 184 ACDENPDATYDFKSDLWSLGITAIEM 209

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 71.5 bits (176), Expect = 1e-13
 Identities = 44/168 (26%), Positives = 80/168 (47%), Gaps = 8/168 (4%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNS--VFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA G V+K   +  +   VA+KK+    +      +   E+  +    H  +V+LL 
Sbjct: 8   IGEGAHGIVFKA-KDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLD 66

Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTE-IAMGIAGGLFYLHEECCTQIIH 625
               G   +LV E+M    ++  L  + +P  + + +     +  G+ Y+H      I+H
Sbjct: 67  VFPHGSGFVLVMEYMP-SDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHAN---GIMH 122

Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE 673
            D+KP N+L+      +I+DFGLA+L + ++    +    T+ Y APE
Sbjct: 123 RDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPE 170

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 71.2 bits (174), Expect = 2e-13
 Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 21/205 (10%)

Query: 509 LGRGAFGTVYKGFVNMGSSN-HVAVKKLN-SVFQDSEKE-FKAEVNGIGQTHHKNLVRLL 565
           LG G FG+V +G +N   S   VAVK +  ++   SE E F +E   + +  H N++RL+
Sbjct: 7   LGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLI 66

Query: 566 GYCDEGQNR------LLVYEFMSNGTVASFLF----GDSKPNW---KLRTEIAMGIAGGL 612
           G C +          +++  FM +G + SFL     GD  P +   ++  +    IA G+
Sbjct: 67  GVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDC-PQYLPTQMLVKFMTDIASGM 125

Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLA-KLLTLDQSHTNTAIRGTKGYVA 671
            YL  +     IH D+  +N +L+++ N  ++DFGL+ K+   D        +    ++A
Sbjct: 126 EYLSSK---SFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIA 182

Query: 672 PEWFRNMPITVKVDVYSYGVLLLEI 696
            E   +   T K DV+S+GV + EI
Sbjct: 183 IESLADRVYTTKSDVWSFGVTMWEI 207

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 71.6 bits (175), Expect = 2e-13
 Identities = 69/217 (31%), Positives = 106/217 (48%), Gaps = 33/217 (15%)

Query: 497 ELVEVTRGFKEELGRGAFGTVYKG-FVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQ 555
           ELVEV       +G G +G VYKG  V  G    +A  K+  V +D E+E K E+N + +
Sbjct: 19  ELVEV-------VGNGTYGQVYKGRHVKTG---QLAAIKVMDVTEDEEEEIKLEINMLKK 68

Query: 556 -THHKNLVRLLGY----CDEGQNR--LLVYEFMSNGTVASFLFGDSKPNWKLRTE----I 604
            +HH+N+    G        G +    LV EF   G+V   L  ++K N  L+ +    I
Sbjct: 69  YSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTD-LVKNTKGN-ALKEDWIAYI 126

Query: 605 AMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR 664
              I  GL +LH     ++IH DIK QN+LL ++   ++ DFG++  L       NT I 
Sbjct: 127 CREILRGLAHLHAH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI- 182

Query: 665 GTKGYVAPEWFR-----NMPITVKVDVYSYGVLLLEI 696
           GT  ++APE        +     + D++S G+  +E+
Sbjct: 183 GTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEM 219

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 71.7 bits (175), Expect = 2e-13
 Identities = 50/191 (26%), Positives = 98/191 (51%), Gaps = 6/191 (3%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           E++G+GA GTV+   +++ +   VA+K++N   Q  ++    E+  + +  + N+V  L 
Sbjct: 25  EKIGQGASGTVFTA-IDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLD 83

Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHC 626
               G    +V E+++ G++   +        ++   +       L +LH     Q+IH 
Sbjct: 84  SFLVGDELFVVMEYLAGGSLTDVVTETCMDEAQI-AAVCRECLQALEFLH---ANQVIHR 139

Query: 627 DIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDV 686
           DIK  N+LL    + +++DFG    +T +QS  +T + GT  ++APE         KVD+
Sbjct: 140 DIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDI 198

Query: 687 YSYGVLLLEII 697
           +S G++ +E++
Sbjct: 199 WSLGIMAIEMV 209

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 71.4 bits (175), Expect = 2e-13
 Identities = 64/200 (32%), Positives = 92/200 (46%), Gaps = 23/200 (11%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH-----HKNLVR 563
           LG+G FG V    V   +    A KKL    +   K+ K E   + +       +   V 
Sbjct: 8   LGKGGFGEVCACQVR-ATGKMYACKKLE---KKRIKKRKGEAMALNEKQILEKVNSRFVV 63

Query: 564 LLGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECC 620
            L Y  E ++ L LV   M+ G +   ++    P +     +  A  I  GL  LH E  
Sbjct: 64  SLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE-- 121

Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR---GTKGYVAPEWFRN 677
            +I++ D+KP+NILLDD+ + RISD GLA      +      IR   GT GY+APE  +N
Sbjct: 122 -RIVYRDLKPENILLDDYGHIRISDLGLAV-----EIPEGETIRGRVGTVGYMAPEVVKN 175

Query: 678 MPITVKVDVYSYGVLLLEII 697
              T   D +  G L+ E+I
Sbjct: 176 ERYTFSPDWWGLGCLIYEMI 195

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 71.3 bits (174), Expect = 2e-13
 Identities = 52/191 (27%), Positives = 98/191 (51%), Gaps = 6/191 (3%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           E++G+GA GTVY   +++ +   VA++++N   Q  ++    E+  + +  + N+V  L 
Sbjct: 26  EKIGQGASGTVYTA-MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD 84

Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHC 626
               G    +V E+++ G++   +        ++   +       L +LH     Q+IH 
Sbjct: 85  SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI-AAVCRECLQALEFLHS---NQVIHR 140

Query: 627 DIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDV 686
           DIK  NILL    + +++DFG    +T +QS  +T + GT  ++APE         KVD+
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDI 199

Query: 687 YSYGVLLLEII 697
           +S G++ +E+I
Sbjct: 200 WSLGIMAIEMI 210

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 70.8 bits (173), Expect = 2e-13
 Identities = 78/290 (26%), Positives = 118/290 (40%), Gaps = 50/290 (17%)

Query: 509 LGRGAFGTVYKGFVNMGSSN---HVAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG GAFGTVYKG       N    VA+K L  +    + KE   E   +       + RL
Sbjct: 15  LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRL 74

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP-------NWKLRTEIAMGIAGGLFYLHE 617
           LG C     +L V + M  G +  ++  +          NW ++      IA G+ YL E
Sbjct: 75  LGICLTSTVQL-VTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQ------IAKGMSYLEE 127

Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
               +++H D+  +N+L+    + +I+DFGLA+LL +D+    T      G V  +W   
Sbjct: 128 ---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDE----TEYHADGGKVPIKWMAL 180

Query: 678 MPI-----TVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALV 732
             I     T + DV+SYGV + E++                      YD    R +  L+
Sbjct: 181 ESILHRRFTHQSDVWSYGVTVWELMTFGAK----------------PYDGIPAREIPDLL 224

Query: 733 E--NDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
           E    L      T+    +MV  W I  D   RP  R++      +   P
Sbjct: 225 EKGERLPQPPICTIDVYMIMVKCWMI--DSECRPRFRELVDEFSRMARDP 272

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 71.0 bits (174), Expect = 2e-13
 Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 21/197 (10%)

Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAE-VNGIGQTHHKN---LVR 563
           +LG G  G+V K  V    +  V  KK   V   ++   + + +  +   H      +V 
Sbjct: 12  DLGAGNGGSVSK--VKHIPTGTVMAKK--VVHIGAKSSVRKQILRELQIMHECRSPYIVS 67

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTE----IAMGIAGGLFYLHEEC 619
             G      N  +  EFM  G+    L    K    +  E    IA+ +  GL YL+   
Sbjct: 68  FYGAFLNENNICMCMEFMDCGS----LDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNV- 122

Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP 679
             +I+H DIKP NIL++     ++ DFG++  L    S  +T + GT  Y++PE  +   
Sbjct: 123 -HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELI--NSIADTFV-GTSTYMSPERIQGGK 178

Query: 680 ITVKVDVYSYGVLLLEI 696
            TVK DV+S G+ ++E+
Sbjct: 179 YTVKSDVWSLGISIIEL 195

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 70.8 bits (173), Expect = 3e-13
 Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 23/206 (11%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQ-THHKNLVRLL 565
           E +G+G +G VYK   N    +  AVK L+ +  D ++E +AE N +    +H N+V+  
Sbjct: 28  ETIGKGTYGKVYK-VTNKKDGSLAAVKILDPI-SDVDEEIEAEYNILQSLPNHPNVVKFY 85

Query: 566 G------YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR----TEIAMGIAGGLFYL 615
           G          GQ   LV E  + G+V   + G      +L     + I  G   GL +L
Sbjct: 86  GMFYKADKLVGGQ-LWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHL 144

Query: 616 HEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF 675
           H     +IIH D+K  NILL      ++ DFG++  LT  +   NT++ GT  ++APE  
Sbjct: 145 HN---NRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSV-GTPFWMAPEVI 200

Query: 676 R-----NMPITVKVDVYSYGVLLLEI 696
                 +     + DV+S G+  +E+
Sbjct: 201 ACEQQYDYSYDARCDVWSLGITAIEL 226

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 70.4 bits (172), Expect = 3e-13
 Identities = 60/205 (29%), Positives = 98/205 (47%), Gaps = 26/205 (12%)

Query: 509 LGRGAFGTVY--KGFVNMGSSNHVAVKKLN-SVFQDSEKEF-KAEVNGIGQTHHKNLVRL 564
           +G G+FG +Y  K   +   S H  +K+++ +     EKE  K EV  + +  H N+V  
Sbjct: 8   IGEGSFGKIYLAKAKSD---SEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTF 64

Query: 565 LGYCDEGQNRLLVYEFMSNGTVAS-------FLFG-DSKPNWKLRTEIAMGIAGGLFYLH 616
                E     +V E+   G +          LF  D   +W ++      I+ GL ++H
Sbjct: 65  FASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQ------ISLGLKHIH 118

Query: 617 EECCTQIIHCDIKPQNILLDDH-YNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF 675
           +    +I+H DIK QNI L  +   A++ DFG+A+ L        T + GT  Y++PE  
Sbjct: 119 DR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCV-GTPYYLSPEIC 174

Query: 676 RNMPITVKVDVYSYGVLLLEIICLR 700
           +N P   K D++S G +L E+  L+
Sbjct: 175 QNRPYNNKTDIWSLGCVLYELCTLK 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 70.8 bits (173), Expect = 3e-13
 Identities = 57/219 (26%), Positives = 104/219 (47%), Gaps = 34/219 (15%)

Query: 505 FKEELGRGAFGTVYKGFVNM-GSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQT-HHKNL 561
           F++ +G G FG V +  +   G   + A+K L     +++ ++F  E+  + +  HH N+
Sbjct: 6   FEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNI 65

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFG----DSKPNW------------KLRTEIA 605
           + LLG C+      +  E+   G +  FL      ++ P +            +   + A
Sbjct: 66  INLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFA 125

Query: 606 MGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRG 665
             +A G+ YL E+   Q IH D+  +N+L+ ++  ++I+DFGL++            ++ 
Sbjct: 126 SDVATGMQYLSEK---QFIHRDLAARNVLVGENLASKIADFGLSR-------GEEVYVKK 175

Query: 666 TKGYVAPEWFR----NMPI-TVKVDVYSYGVLLLEIICL 699
           T G +   W      N  + T K DV+S+GVLL EI+ L
Sbjct: 176 TMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSL 214

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 71.2 bits (174), Expect = 3e-13
 Identities = 61/239 (25%), Positives = 99/239 (41%), Gaps = 36/239 (15%)

Query: 558 HKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP----------------NWKLR 601
           HKN++ LLG C +     ++ E+ S G +  +L     P                 +K  
Sbjct: 77  HKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDL 136

Query: 602 TEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLDQSHTN 660
              A  +A G+ YL  + C   IH D+  +N+L+ +    +I+DFGLA+ +  +D     
Sbjct: 137 VSCAYQVARGMEYLASQKC---IHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKT 193

Query: 661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAY 720
           T  R    ++APE   +   T + DV+S+GVLL EI  L  +                 Y
Sbjct: 194 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGS----------------PY 237

Query: 721 DRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEV 779
                  L  L++            H   M+   C    PS RPT +++ + L+ V+ V
Sbjct: 238 PGIPVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTV 296

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 70.5 bits (173), Expect = 3e-13
 Identities = 69/283 (24%), Positives = 118/283 (41%), Gaps = 45/283 (15%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQTHH-KNLVRL 564
           EELGRGA+G V K   ++ +   +AVK++ +     E K    +++   ++      V  
Sbjct: 7   EELGRGAYGVVDK-MRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTF 65

Query: 565 LGYC-DEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT------EIAMGIAGGLFYLHE 617
            G    EG     V+  M     +   F     +  L        +IA+ I   L YLH 
Sbjct: 66  YGALFREGD----VWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHS 121

Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
           +    +IH D+KP N+L++ +   ++ DFG++  L    + T  A  G K Y+APE  R 
Sbjct: 122 K--LSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKTIDA--GCKPYMAPE--RI 175

Query: 678 MPIT------VKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQE--RTLE 729
            P        VK DV+S G+ ++E+   R                 + YD ++   + L+
Sbjct: 176 NPELNQKGYDVKSDVWSLGITMIELATGR-----------------FPYDSWKTPFQQLK 218

Query: 730 ALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM 772
            +VE     +        F      C++++   RP   ++ Q 
Sbjct: 219 QVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 70.8 bits (173), Expect = 4e-13
 Identities = 62/208 (29%), Positives = 96/208 (46%), Gaps = 11/208 (5%)

Query: 504 GFKEELGRGAFGTVYKGFVNMGSSNHV-AVK--KLNSVFQDSEKEFK-AEVNGIGQTHHK 559
            F   LG+G+FG V         ++ + A+K  K + V QD + E    E   +      
Sbjct: 3   NFLMVLGKGSFGKVM--LAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKP 60

Query: 560 NLVRLLGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
             +  L  C +  +RL  V E+++ G +   +    K         A  I+ GLF+LH  
Sbjct: 61  PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRR 120

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               II+ D+K  N++LD   + +I+DFG+ K   +D   T T   GT  Y+APE     
Sbjct: 121 ---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRTFC-GTPDYIAPEIIAYQ 176

Query: 679 PITVKVDVYSYGVLLLEIICLRRNIDNE 706
           P    VD ++YGVLL E++  +   D E
Sbjct: 177 PYGKSVDWWAYGVLLYEMLAGQPPFDGE 204

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 70.6 bits (173), Expect = 5e-13
 Identities = 66/198 (33%), Positives = 97/198 (48%), Gaps = 21/198 (10%)

Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEK--EFKAEVNGIGQTHHKNLVRL 564
           E+G G+FG VY    ++ ++  VA+KK++ S  Q +EK  +   EV  + Q  H N +  
Sbjct: 22  EIGHGSFGAVYFAR-DVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEY 80

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIA---MGIAGGLFYLHEECCT 621
            G         LV E+   G+ +  L    KP  ++  EIA    G   GL YLH     
Sbjct: 81  KGCYLREHTAWLVMEYCL-GSASDILEVHKKPLQEV--EIAAICHGALQGLAYLHSHE-- 135

Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM--- 678
             IH DIK  NILL +    +++DFG A L+    S  N+ + GT  ++APE    M   
Sbjct: 136 -RIHRDIKAGNILLTEPGTVKLADFGSASLV----SPANSFV-GTPYWMAPEVILAMDEG 189

Query: 679 PITVKVDVYSYGVLLLEI 696
               KVDV+S G+  +E+
Sbjct: 190 QYDGKVDVWSLGITCIEL 207

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 70.3 bits (173), Expect = 7e-13
 Identities = 60/218 (27%), Positives = 110/218 (50%), Gaps = 46/218 (21%)

Query: 506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ---DSEKEFKAEVNGIGQ-THHKNL 561
            ++LG+GA+G V+K  ++  +   VA+KK+   F+   D+++ F+ E+  + +   H N+
Sbjct: 12  LQKLGKGAYGIVWKA-IDRRTKEVVALKKIFDAFRNATDAQRTFR-EIMFLQELGDHPNI 69

Query: 562 VRLLGY--CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGI----------- 608
           V+LL     +  ++  LV+E+M           ++  +  +R  I   +           
Sbjct: 70  VKLLNVIKAENDKDIYLVFEYM-----------ETDLHAVIRANILEDVHKRYIMYQLLK 118

Query: 609 AGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT-LDQSHTNTAIRGTK 667
           A  L Y+H      +IH D+KP NILL+     +++DFGLA+ L+ L+++  N  +  T 
Sbjct: 119 A--LKYIHS---GNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVL--TD 171

Query: 668 GYVAPEWFRNMPITVK-------VDVYSYGVLLLEIIC 698
            YVA  W+R   I +        VD++S G +L E++ 
Sbjct: 172 -YVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLL 208

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 69.6 bits (170), Expect = 7e-13
 Identities = 62/202 (30%), Positives = 90/202 (44%), Gaps = 27/202 (13%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH-----HKNLVR 563
           LG+G FG V    V   +    A KKL    +   K+ K E   + +       +   V 
Sbjct: 8   LGKGGFGEVCACQVR-ATGKMYACKKLE---KKRIKKRKGEAMALNEKRILEKVNSRFVV 63

Query: 564 LLGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECC-- 620
            L Y  E ++ L LV   M+ G +   ++    P +  +  I        FY  E CC  
Sbjct: 64  SLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAI--------FYAAELCCGL 115

Query: 621 -----TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF 675
                 +I++ D+KP+NILLDD  + RISD GLA  + + +  T     GT GY+APE  
Sbjct: 116 EDLQRERIVYRDLKPENILLDDRGHIRISDLGLA--VQIPEGETVRGRVGTVGYMAPEVI 173

Query: 676 RNMPITVKVDVYSYGVLLLEII 697
            N   T   D +  G L+ E+I
Sbjct: 174 NNEKYTFSPDWWGLGCLIYEMI 195

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 69.1 bits (170), Expect = 1e-12
 Identities = 73/319 (22%), Positives = 127/319 (39%), Gaps = 96/319 (30%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE-----KEFKA--EVNGIGQTHHK 559
           ++LG G FG+VY    N  +   VA+KK+   F   E     +E K+  ++N      H 
Sbjct: 5   KQLGDGTFGSVYLA-RNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLN-----EHP 58

Query: 560 NLVRLLGYCDEGQNRLLVYEFM----------------SNGTVASFLFGDSKPNWKLRTE 603
           N+V+L     E      V+E+M                S   + S ++           +
Sbjct: 59  NIVKLKEVFRENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIY-----------Q 107

Query: 604 IAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAI 663
           I  G+A    ++H+       H D+KP+N+L+      +I+DFGLA+   +      T  
Sbjct: 108 ILQGLA----HIHK---HGFFHRDLKPENLLVSGPEVVKIADFGLAR--EIRSRPPYTDY 158

Query: 664 RGTKGYVAPEW-----FRNMPITVKVDVYSYGVLLLEIICLR-----RNIDNEISKVDK- 712
             T+ Y APE        + P    VD+++ G ++ E+  LR         +EI ++ K 
Sbjct: 159 VSTRWYRAPEILLRSTSYSSP----VDIWALGCIMAELYTLRPLFPGS---SEIDQLYKI 211

Query: 713 -AIL-----TDW------------AYDRYQERTLEALVEN-DLEAMNNVTMLHRFVMVAF 753
            ++L      DW             + ++   +L  L+ N   EA++          +  
Sbjct: 212 CSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAID----------LIK 261

Query: 754 WCIQEDPSHRPTMRKVTQM 772
             ++ DP  RPT  +  Q 
Sbjct: 262 DMLRWDPKKRPTASQALQH 280

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 68.5 bits (167), Expect = 1e-12
 Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 15/199 (7%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKL--NSVFQDSEKEFKA---EVNGIGQTHHKNLVR 563
           LGRGAFG VY  + +  +   +AVK++  +   Q++ KE  A   E+  +    H  +V+
Sbjct: 10  LGRGAFGEVYLCY-DADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQ 68

Query: 564 LLGYC--DEGQNRLLVY-EFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECC 620
             G C  D  + +L ++ E+M  G++   L         +       I  G+ YLH    
Sbjct: 69  YYG-CLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHS--- 124

Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLDQSHTN-TAIRGTKGYVAPEWFRNM 678
             I+H DIK  NIL D   N ++ DFG +K + T+  S T   ++ GT  +++PE     
Sbjct: 125 NMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGE 184

Query: 679 PITVKVDVYSYGVLLLEII 697
               K DV+S    ++E++
Sbjct: 185 GYGRKADVWSVACTVVEML 203

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 68.9 bits (168), Expect = 1e-12
 Identities = 50/190 (26%), Positives = 92/190 (48%), Gaps = 6/190 (3%)

Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           ++G G+ G V        +   VAVKK++   Q   +    EV  +   HH+N+V +   
Sbjct: 29  KIGEGSTGIVCIA-TEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNS 87

Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCD 627
              G    +V EF+  G +   +   ++ N +    + + +   L YLH +    +IH D
Sbjct: 88  YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQ---GVIHRD 143

Query: 628 IKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVY 687
           IK  +ILL      ++SDFG    ++ +     + + GT  ++APE    +P   +VD++
Sbjct: 144 IKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLV-GTPYWMAPEVISRLPYGTEVDIW 202

Query: 688 SYGVLLLEII 697
           S G++++E+I
Sbjct: 203 SLGIMVIEMI 212

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 68.9 bits (169), Expect = 1e-12
 Identities = 63/233 (27%), Positives = 98/233 (42%), Gaps = 47/233 (20%)

Query: 505 FKEELGRGAFGTVY---------------KGFVNMGSSNHVAVKKLN-SVFQDSEKEFKA 548
           F E+LG G FG V+                   N  +   VAVK L      ++ ++F  
Sbjct: 9   FVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLK 68

Query: 549 EVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFL----FGDSKPNWKLRT-- 602
           EV  + +    N+ RLLG C       ++ E+M NG +  FL       S      ++  
Sbjct: 69  EVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLS 128

Query: 603 -----EIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLDQ 656
                 +A  IA G+ YL        +H D+  +N L+  +Y  +I+DFG+++ L + D 
Sbjct: 129 FSTLLYMATQIASGMRYLES---LNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDY 185

Query: 657 SHTNTAIRGTKGYVAPEWFRNMP--------ITVKVDVYSYGVLLLEIICLRR 701
                 ++G     AP   R M          T K DV+++GV L EI+ L R
Sbjct: 186 YR----VQGR----APLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCR 230

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 68.8 bits (168), Expect = 1e-12
 Identities = 60/197 (30%), Positives = 92/197 (46%), Gaps = 17/197 (8%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH-----HKNLVR 563
           LG+G FG V    V   +    A K+L    +   K+ K E   + +       +   V 
Sbjct: 8   LGKGGFGEVCACQVR-ATGKMYACKRLE---KKRIKKRKGESMALNEKQILEKVNSQFVV 63

Query: 564 LLGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECC 620
            L Y  E ++ L LV   M+ G +   ++    P ++    +  A  I  GL  LH E  
Sbjct: 64  NLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE-- 121

Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPI 680
              ++ D+KP+NILLDD+ + RISD GLA  + + +  +     GT GY+APE   N   
Sbjct: 122 -NTVYRDLKPENILLDDYGHIRISDLGLA--VKIPEGESIRGRVGTVGYMAPEVLNNQRY 178

Query: 681 TVKVDVYSYGVLLLEII 697
           T+  D +  G L+ E+I
Sbjct: 179 TLSPDYWGLGCLIYEMI 195

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 68.9 bits (169), Expect = 2e-12
 Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 4/94 (4%)

Query: 605 AMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR 664
           A  I  GL +LHE     II+ D+K  N+LLD   + +I+DFG+ K   L    T+T   
Sbjct: 102 AAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFC- 157

Query: 665 GTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC 698
           GT  Y+APE     P    VD ++ GVLL E++ 
Sbjct: 158 GTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLA 191

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 68.6 bits (168), Expect = 2e-12
 Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 36/206 (17%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE--KEFKA----EVNGIGQTHHKNLV 562
           +G G++G V K   +  +   VA+KK    F +SE  K  K     E+  + Q  H+NLV
Sbjct: 9   VGEGSYGMVMK-CKHKETGQIVAIKK----FLESEDDKMVKKIAMREIRMLKQLRHENLV 63

Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPN---WKLRTEIAMGIAGGLFYLHEEC 619
            L+      +   LV+EF+ + TV   L  +  PN        +    I  G+ + H   
Sbjct: 64  NLIEVFRRKKRLYLVFEFVDH-TVLDDL--EKYPNGLDESRVRKYLFQILRGIEFCHSH- 119

Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPEWFRNM 678
              IIH DIKP+NIL+      ++ DFG A+ L    + +T+        YVA  W+R  
Sbjct: 120 --NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTD--------YVATRWYRAP 169

Query: 679 PITVK-------VDVYSYGVLLLEII 697
            + V        VD+++ G L+ E++
Sbjct: 170 ELLVGDTKYGRAVDIWAVGCLVTEML 195

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 68.9 bits (168), Expect = 2e-12
 Identities = 76/266 (28%), Positives = 114/266 (42%), Gaps = 35/266 (13%)

Query: 508 ELGRGAFGTVYKGFVNMGSSNH-VAVKKLN-SVFQDSEK--EFKAEVNGIGQTHHKNLVR 563
           E+G G+FG VY  F     +N  VAVKK++ S  Q +EK  +   EV  + Q  H N + 
Sbjct: 28  EIGHGSFGAVY--FATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIE 85

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR-TEIAMGIAGGLFYLHEECCTQ 622
             G   +     LV E+   G+ +  L    KP  ++    I  G   GL YLH      
Sbjct: 86  YKGCYLKEHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN--- 141

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM---P 679
           +IH DIK  NILL +    +++DFG A   +   S       GT  ++APE    M    
Sbjct: 142 MIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFV-----GTPYWMAPEVILAMDEGQ 196

Query: 680 ITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM 739
              KVDV+S G     I C+      E+++    +     ++      L  + +ND   +
Sbjct: 197 YDGKVDVWSLG-----ITCI------ELAERKPPL-----FNMNAMSALYHIAQNDSPTL 240

Query: 740 NNVTMLHRFVMVAFWCIQEDPSHRPT 765
            +      F     +C+Q+ P  RP 
Sbjct: 241 QSNEWTDSFRGFVDYCLQKIPQERPA 266

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 68.5 bits (167), Expect = 2e-12
 Identities = 55/199 (27%), Positives = 101/199 (50%), Gaps = 19/199 (9%)

Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG- 566
           ELG GAFG VYK   N  +    A K + +  ++  +++  E+  +   +H  +V+LLG 
Sbjct: 19  ELGDGAFGKVYKA-KNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGA 77

Query: 567 YCDEGQNRLLVYEFMSNGTVASFLF----GDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           +  +G+  +++ EF   G V + +     G ++P  ++   I   +   L YLH     +
Sbjct: 78  FYWDGKLWIMI-EFCPGGAVDAIMLELDRGLTEPQIQV---ICRQMLEALQYLHSM---K 130

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAP-----EWFRN 677
           IIH D+K  N+LL    + +++DFG++          ++ I GT  ++AP     E  ++
Sbjct: 131 IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFI-GTPYWMAPEVVMCETMKD 189

Query: 678 MPITVKVDVYSYGVLLLEI 696
            P   K D++S G+ L+E+
Sbjct: 190 TPYDYKADIWSLGITLIEM 208

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 68.6 bits (168), Expect = 2e-12
 Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 37/209 (17%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHV-AVKKL-NSVFQDSEKEFKAEVNGIGQTHH-KNLVR 563
            E+G G  G VYK  +    + HV AVK++  +  ++  K    +++ + ++H    +V+
Sbjct: 21  GEIGSGTCGQVYK--MRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVK 78

Query: 564 LLGYCDEGQNRLLVYEFMS----------NGTVASFLFGDSKPNWKLRTEIAMGIAGGLF 613
             GY     +  +  E MS           G +   + G          ++ + I   L 
Sbjct: 79  CYGYFITDSDVFICMELMSTCLDKLLKRIQGPIPEDILG----------KMTVAIVKALH 128

Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE 673
           YL E+    +IH D+KP NILLD   N ++ DFG++  L   ++ T +A  G   Y+APE
Sbjct: 129 YLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRSA--GCAAYMAPE 184

Query: 674 WFRNMPIT------VKVDVYSYGVLLLEI 696
             R  P        ++ DV+S G+ L+E+
Sbjct: 185 --RIDPPDPNPKYDIRADVWSLGISLVEL 211

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 68.0 bits (166), Expect = 2e-12
 Identities = 50/153 (32%), Positives = 72/153 (47%), Gaps = 12/153 (7%)

Query: 507 EELGRGAFGTVYKGFVNMG-SSNHVAVKKL--NSVFQDSEKEFKAEVNGIGQTHHKNLVR 563
           +E+G G FG V  G VN G +   V VK+L  ++  Q+ + +F  E        H NL++
Sbjct: 1   KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQE-QMKFLEEAQPYRSLQHSNLLQ 59

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSK-----PNWKLRTEIAMGIAGGLFYLHEE 618
            LG C E    LLV EF   G +  +L    K     P+      +A  IA GL +LH+ 
Sbjct: 60  CLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN 119

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKL 651
                IH D+  +N LL      +I D+GL+  
Sbjct: 120 ---NFIHSDLALRNCLLTADLTVKIGDYGLSHN 149

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 68.9 bits (169), Expect = 2e-12
 Identities = 57/226 (25%), Positives = 92/226 (40%), Gaps = 47/226 (20%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKLNS---VFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           +GRGAFG V+   V    +  V A+K L     + ++     +AE + +       +V+L
Sbjct: 9   IGRGAFGEVW--LVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKL 66

Query: 565 LGYCDEGQNRL-LVYEFMSNGTVASFL--FGDSKPNWK--LRTEIAMGIAGGLFYLHEEC 619
             Y  + +  L LV E+M  G + + L                E+ + +      +H+  
Sbjct: 67  Y-YSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALD----SVHKLG 121

Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAK-------------LLTLDQSHTNTAIR-- 664
               IH DIKP NIL+D   + +++DFGL K                      N  +R  
Sbjct: 122 F---IHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRR 178

Query: 665 -------------GTKGYVAPEWFRNMPITVKVDVYSYGVLLLEII 697
                        GT  Y+APE  R  P  ++ D +S GV+L E++
Sbjct: 179 DHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEML 224

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 67.5 bits (165), Expect = 4e-12
 Identities = 50/192 (26%), Positives = 94/192 (48%), Gaps = 11/192 (5%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLN---SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           +G G FG V+     +    + A+K +     +    E+    E   + +  H  ++RL 
Sbjct: 9   VGTGTFGRVHLVRDRISEH-YYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLF 67

Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
               + +   ++ E++  G + S+L    + +       A  I   L YLH +   +I++
Sbjct: 68  WTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSK---EIVY 124

Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D+KP+NILLD   + +++DFG AK L  D++ T   + GT  Y+APE  ++      VD
Sbjct: 125 RDLKPENILLDKEGHIKLTDFGFAKKLR-DRTWT---LCGTPEYLAPEVIQSKGHNKAVD 180

Query: 686 VYSYGVLLLEII 697
            ++ G+L+ E++
Sbjct: 181 WWALGILIYEML 192

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 67.9 bits (166), Expect = 4e-12
 Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 13/195 (6%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVK--KLNSVFQDSEKE---FKAEVNGIGQTHHKNLVR 563
           LG+G+FG V       G+    A+K  K + + QD + E    +  V  +        + 
Sbjct: 8   LGKGSFGKVMLA-ERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPP--FLT 64

Query: 564 LLGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
            L  C +  +RL  V E+++ G +   +    K         A  IA GLF+LH +    
Sbjct: 65  QLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSK---G 121

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           II+ D+K  N++LD   + +I+DFG+ K        T T   GT  Y+APE     P   
Sbjct: 122 IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFC-GTPDYIAPEIIAYQPYGK 180

Query: 683 KVDVYSYGVLLLEII 697
            VD +++GVLL E++
Sbjct: 181 SVDWWAFGVLLYEML 195

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 67.3 bits (164), Expect = 5e-12
 Identities = 76/303 (25%), Positives = 123/303 (40%), Gaps = 62/303 (20%)

Query: 509 LGRGAFGTVYKGFVNMGSSNH-------VAVKKLNSVFQDSEKEFKAEVNG------IGQ 555
           LG G FG V      +G           VAVK L S    +EK+    ++       IG+
Sbjct: 26  LGEGCFGQVVMAEA-IGLDKEKPNRVTKVAVKMLKS--DATEKDLSDLISEMEMMKMIGK 82

Query: 556 THHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP----------------NWK 599
             HKN++ LLG C +     ++ E+ S G +  +L     P                ++K
Sbjct: 83  --HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFK 140

Query: 600 LRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT 659
                A  +A G+ YL  + C   IH D+  +N+L+ +    +I+DFGLA+    D  H 
Sbjct: 141 DLVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLAR----DIHHI 193

Query: 660 NTAIRGTKG-----YVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAI 714
           +   + T G     ++APE   +   T + DV+S+GVLL EI  L  +            
Sbjct: 194 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS------------ 241

Query: 715 LTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
                Y       L  L++            +   M+   C    PS RPT +++ + L+
Sbjct: 242 ----PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 297

Query: 775 GVV 777
            ++
Sbjct: 298 RIL 300

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 67.6 bits (166), Expect = 6e-12
 Identities = 60/229 (26%), Positives = 98/229 (42%), Gaps = 68/229 (29%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNLVR 563
           +G GA+G V    V+  +   VA+KK+++VF D      A     E+  +    H+N++ 
Sbjct: 8   IGSGAYGVVCSA-VDKRTGRKVAIKKISNVFDD---LIDAKRILREIKLLRHLRHENIIG 63

Query: 564 LLGYCD-------EGQNRL-LVYEFM--------------SNGTVASFLFGDSKPNWKLR 601
           LL   D       E  N + +V E M              ++  +  FL+        LR
Sbjct: 64  LL---DILRPPSPEDFNDVYIVTELMETDLHKVIKSPQPLTDDHIQYFLYQ------ILR 114

Query: 602 TEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN- 660
                    GL YLH      +IH D+KP NIL++ + + +I DFGLA+ +  D+     
Sbjct: 115 ---------GLKYLHS---ANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGF 162

Query: 661 -TAIRGTKGYVAPEWFR-------NMPITVKVDVYSYGVLLLEIICLRR 701
            T       YV   W+R       +   T  +D++S G +  E++  R+
Sbjct: 163 LT------EYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELL-TRK 204

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 67.0 bits (163), Expect = 6e-12
 Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 21/205 (10%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGI-GQTHHKNLVRLL 565
           E +G+G +G V+K  +N  + +  AVK L+ +  D ++E +AE N +   + H N+V+  
Sbjct: 24  ETIGKGTYGKVFK-VLNKKNGSKAAVKILDPI-HDIDEEIEAEYNILKALSDHPNVVKFY 81

Query: 566 GY-----CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAG----GLFYLH 616
           G         G    LV E  + G+V   + G  K   ++   I   I      GL +LH
Sbjct: 82  GMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLH 141

Query: 617 EECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR 676
                + IH D+K  NILL      ++ DFG++  LT  +   NT++ GT  ++APE   
Sbjct: 142 V---NKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSV-GTPFWMAPEVIA 197

Query: 677 -----NMPITVKVDVYSYGVLLLEI 696
                +     + DV+S G+  +E+
Sbjct: 198 CEQQLDSTYDARCDVWSLGITAIEL 222

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 69.0 bits (169), Expect = 6e-12
 Identities = 60/224 (26%), Positives = 92/224 (41%), Gaps = 37/224 (16%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE---KEFKAEVNGIGQTHHKNLVRLL 565
           +G+G  G VY  + +   S  VA+KK+     ++    K F  E        H  +V + 
Sbjct: 10  IGKGGMGEVYLAY-DPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVY 68

Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWK---LRTEIAMGIAGGLFY--LHEECC 620
             C +G        ++   T+ S L    K  W+   L  E+A   + G F    H+ C 
Sbjct: 69  SICSDGDPVYYTMPYIEGYTLKSLL----KSVWQKESLSKELAEKTSVGAFLSIFHKICA 124

Query: 621 T-------QIIHCDIKPQNILLDDHYNARISDFGLAK--------LLTLDQSHTNTA--- 662
           T        ++H D+KP NILL       I D+G A         LL +D    N     
Sbjct: 125 TIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSS 184

Query: 663 ------IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLR 700
                 I GT  Y+APE    +P +   D+Y+ GV+L +++ L 
Sbjct: 185 MTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLS 228

Length = 932

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 67.2 bits (164), Expect = 6e-12
 Identities = 60/196 (30%), Positives = 96/196 (48%), Gaps = 13/196 (6%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVK--KLNSVFQDSEKEFK-AEVNGIGQTHHKNLVRL 564
           LG+G+FG V      +  S  + AVK  K + + QD + E    E   +    +   +  
Sbjct: 3   LGKGSFGKVM--LARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQ 60

Query: 565 LGYCDEGQNRLL-VYEFMSNGTVASFLFGDSKPNWKLRTEI-AMGIAGGLFYLHEECCTQ 622
           L  C +  +RL  V EF++ G +  F    S+   + R    A  I   L +LH++    
Sbjct: 61  LYCCFQTPDRLFFVMEFVNGGDLM-FHIQKSRRFDEARARFYAAEITSALMFLHDK---G 116

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           II+ D+K  N+LLD   + +++DFG+ K    +   T+T   GT  Y+APE  + M    
Sbjct: 117 IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFC-GTPDYIAPEILQEMLYGP 175

Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVLL E++C
Sbjct: 176 SVDWWAMGVLLYEMLC 191

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 66.6 bits (162), Expect = 7e-12
 Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 35/219 (15%)

Query: 505 FKEELGRGAFGTVYKGFVNMGS-----SNHVAVKKLNSVFQDS-EKEFKAEVNGIGQTHH 558
           F EELG   FG VYKG +  G+     +  VA+K L    +    +EFK E     +  H
Sbjct: 9   FMEELGEDRFGKVYKGHL-FGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQH 67

Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLF--------GDSKPNWKLRT-------- 602
            N+V LLG   + Q   +++ + S+  +  FL         G +  +  +++        
Sbjct: 68  PNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFV 127

Query: 603 EIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLD----QS 657
            I   IA G+ +L       ++H D+  +N+L+ D  N +ISD GL + +   D      
Sbjct: 128 HIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMG 184

Query: 658 HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEI 696
           ++   IR    +++PE       ++  D++SYGV+L E+
Sbjct: 185 NSLLPIR----WMSPEAIMYGKFSIDSDIWSYGVVLWEV 219

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 66.3 bits (162), Expect = 8e-12
 Identities = 63/217 (29%), Positives = 114/217 (52%), Gaps = 30/217 (13%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE-----FKAEVNGIGQTHHKNL 561
           E++G G +G VYKG  N  +   VA+KK+     +SE+E        E++ + +  H N+
Sbjct: 6   EKIGEGTYGVVYKG-RNKKTGQIVAMKKIR---LESEEEGVPSTAIREISLLKELQHPNI 61

Query: 562 VRLLGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWK-LRTEIAMG----IAGGLFYL 615
           V L     + ++RL L++EF+S   +  +L  DS P  + +  E+       I  G+ + 
Sbjct: 62  VCLQDVLMQ-ESRLYLIFEFLSM-DLKKYL--DSLPKGQYMDAELVKSYLYQILQGILFC 117

Query: 616 HEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD-QSHTNTAIRGTKGYVAPEW 674
           H     +++H D+KPQN+L+D+    +++DFGLA+   +  + +T+  +  T  Y APE 
Sbjct: 118 HSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVV--TLWYRAPEV 172

Query: 675 FRNMP-ITVKVDVYSYGVLLLEIICLRRNI---DNEI 707
               P  +  VD++S G +  E+   ++ +   D+EI
Sbjct: 173 LLGSPRYSTPVDIWSIGTIFAEMA-TKKPLFHGDSEI 208

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 66.7 bits (163), Expect = 9e-12
 Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 4/93 (4%)

Query: 605 AMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR 664
           A  IA  L YLH      II+ D+KP+NILLD   +  ++DFGL K   ++ S T +   
Sbjct: 102 AAEIASALGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCK-EGIEHSKTTSTFC 157

Query: 665 GTKGYVAPEWFRNMPITVKVDVYSYGVLLLEII 697
           GT  Y+APE  R  P    VD +  G +L E++
Sbjct: 158 GTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEML 190

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 66.1 bits (161), Expect = 9e-12
 Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 12/199 (6%)

Query: 508 ELGRGAFGTVYKGFVNMGSSN---HVAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKNLVR 563
           +LG G FG V     +    N    VAVK L      +   + K E+  +   +H+N+V+
Sbjct: 11  DLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVK 70

Query: 564 LLGYCDEGQNR--LLVYEFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECC 620
             G C E       L+ EF+ +G++  +L  + +K N K + + A+ I  G+ YL     
Sbjct: 71  YKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSR-- 128

Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA--IRGTKGYVAPEWFRNM 678
            Q +H D+  +N+L++  +  +I DFGL K +  D+ +      +     + APE     
Sbjct: 129 -QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQS 187

Query: 679 PITVKVDVYSYGVLLLEII 697
              +  DV+S+GV L E++
Sbjct: 188 KFYIASDVWSFGVTLYELL 206

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 66.1 bits (161), Expect = 1e-11
 Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 23/203 (11%)

Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-------AEVNGIGQTHHKN 560
           E+G GA+GTVYK   +  S + VA+K +    Q +E           A +  +    H N
Sbjct: 7   EIGVGAYGTVYKA-RDPHSGHFVALKSVR--VQTNEDGLPLSTVREVALLKRLEAFDHPN 63

Query: 561 LVRLLGYC-----DEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLF 613
           +VRL+  C     D      LV+E +    + ++L     P     T  ++      GL 
Sbjct: 64  IVRLMDVCATSRTDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLD 122

Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE 673
           +LH  C   I+H D+KP+NIL+      +++DFGLA++ +   + T   +  T  Y APE
Sbjct: 123 FLHANC---IVHRDLKPENILVTSGGQVKLADFGLARIYSCQMALTPVVV--TLWYRAPE 177

Query: 674 WFRNMPITVKVDVYSYGVLLLEI 696
                     VD++S G +  E+
Sbjct: 178 VLLQSTYATPVDMWSVGCIFAEM 200

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 65.5 bits (160), Expect = 1e-11
 Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 12/198 (6%)

Query: 506 KEELGRGAFGTVYKG-FVNM-GSSNHVAVK--KLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
              +G G FG VY+G +++       VAVK  K  +     EK F  E   + Q  H ++
Sbjct: 11  GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREK-FLQEAYIMRQFDHPHI 69

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEEC 619
           V+L+G   E     +V E    G + S+L   +K +  L + I  +  ++  L YL    
Sbjct: 70  VKLIGVITE-NPVWIVMELAPLGELRSYL-QVNKYSLDLASLILYSYQLSTALAYLES-- 125

Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP 679
             + +H DI  +N+L+      ++ DFGL++ L  +  +  +  +    ++APE      
Sbjct: 126 -KRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRR 184

Query: 680 ITVKVDVYSYGVLLLEII 697
            T   DV+ +GV + EI+
Sbjct: 185 FTSASDVWMFGVCMWEIL 202

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 66.2 bits (161), Expect = 1e-11
 Identities = 49/190 (25%), Positives = 91/190 (47%), Gaps = 6/190 (3%)

Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           ++G G+ G V    V   S   VAVKK++   Q   +    EV  +    H+N+V +   
Sbjct: 27  KIGEGSTGIVCIATVK-SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 85

Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCD 627
              G    +V EF+  G +   +   ++ N +    + + +   L  LH +    +IH D
Sbjct: 86  YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRD 141

Query: 628 IKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVY 687
           IK  +ILL      ++SDFG    ++ +     + + GT  ++APE    +P   +VD++
Sbjct: 142 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLV-GTPYWMAPELISRLPYGPEVDIW 200

Query: 688 SYGVLLLEII 697
           S G++++E++
Sbjct: 201 SLGIMVIEMV 210

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 66.0 bits (161), Expect = 1e-11
 Identities = 61/219 (27%), Positives = 111/219 (50%), Gaps = 29/219 (13%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E        E++ + + +H N+
Sbjct: 6   EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 61

Query: 562 VRLLGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG----IAGGLFYLH 616
           V+LL      +N+L LV+EF+         F D+ P   +   +       +  GL + H
Sbjct: 62  VKLLDVI-HTENKLYLVFEFLHQDLKK---FMDASPLSGIPLPLIKSYLFQLLQGLAFCH 117

Query: 617 EECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD-QSHTNTAIRGTKGYVAPEWF 675
                +++H D+KPQN+L++     +++DFGLA+   +  +++T+  +  T  Y APE  
Sbjct: 118 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEIL 172

Query: 676 RNMPI-TVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
                 +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 173 LGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 210

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 65.5 bits (159), Expect = 1e-11
 Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 34/215 (15%)

Query: 509 LGRGAFGTVYKGFVNM-GSSNHVAVKKLNS-VFQDSEKEFKAEVNGIGQT-HHKNLVRLL 565
           +G G FG V K  +   G     A+K++     +D  ++F  E+  + +  HH N++ LL
Sbjct: 3   IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 62

Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFG----DSKPNW------------KLRTEIAMGIA 609
           G C+      L  E+  +G +  FL      ++ P +            +     A  +A
Sbjct: 63  GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 122

Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGY 669
            G+ YL ++   Q IH D+  +NIL+ ++Y A+I+DFGL++            ++ T G 
Sbjct: 123 RGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR-------GQEVYVKKTMGR 172

Query: 670 VAPEWFR----NMPI-TVKVDVYSYGVLLLEIICL 699
           +   W      N  + T   DV+SYGVLL EI+ L
Sbjct: 173 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSL 207

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 65.5 bits (160), Expect = 2e-11
 Identities = 47/190 (24%), Positives = 90/190 (47%), Gaps = 6/190 (3%)

Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           ++G G+ G V        +   VAVKK++   Q   +    EV  +    H N+V +   
Sbjct: 26  KIGEGSTGIVCIATD-KSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSS 84

Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCD 627
              G    +V EF+  G +   +   ++ N +    + + +   L +LH +    +IH D
Sbjct: 85  YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLAVLKALSFLHAQ---GVIHRD 140

Query: 628 IKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVY 687
           IK  +ILL      ++SDFG    ++ +     + + GT  ++APE    +P   +VD++
Sbjct: 141 IKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLV-GTPYWMAPEVISRLPYGTEVDIW 199

Query: 688 SYGVLLLEII 697
           S G++++E++
Sbjct: 200 SLGIMVIEMV 209

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 65.8 bits (160), Expect = 2e-11
 Identities = 58/237 (24%), Positives = 101/237 (42%), Gaps = 36/237 (15%)

Query: 558 HKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIA------------ 605
           HKN++ LLG C +     ++ E+ S G +  +L     P  +   +IA            
Sbjct: 80  HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDL 139

Query: 606 ----MGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLDQSHTN 660
                 +A G+ YL  + C   IH D+  +N+L+ ++   +I+DFGLA+ +  +D     
Sbjct: 140 VSCTYQVARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKT 196

Query: 661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAY 720
           T  R    ++APE   +   T + DV+S+GVL+ EI  L  +                 Y
Sbjct: 197 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS----------------PY 240

Query: 721 DRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV 777
                  L  L++            +   M+   C    PSHRPT +++ + L+ ++
Sbjct: 241 PGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRIL 297

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 65.8 bits (161), Expect = 2e-11
 Identities = 55/221 (24%), Positives = 96/221 (43%), Gaps = 44/221 (19%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ--DSEKEFKAEVNGIGQTHHKNLVRL 564
           E +G GA+G V    ++  S   VA+KK+   F      K    E+  +    H N++ +
Sbjct: 11  ENIGSGAYGVVCSA-IDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAI 69

Query: 565 LGYC----DEGQNRLLVYEFM---------SNGT-----VASFLFGDSKPNWKLRTEIAM 606
                    + ++  +V + M         S+       +  FL+        LR     
Sbjct: 70  RDILRPPGADFKDVYVVMDLMESDLHHIIHSDQPLTEEHIRYFLYQ------LLR----- 118

Query: 607 GIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT---LDQSHTNTAI 663
               GL Y+H      +IH D+KP N+L+++    RI DFG+A+ L+    +  +  T  
Sbjct: 119 ----GLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEY 171

Query: 664 RGTKGYVAPEWFRNMP-ITVKVDVYSYGVLLLEIICLRRNI 703
             T+ Y APE   ++P  T  +D++S G +  E++  RR +
Sbjct: 172 VATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEML-GRRQL 211

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 65.1 bits (159), Expect = 2e-11
 Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 36/209 (17%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE------KEFKAEVNGIGQTHHKN 560
            ++G G++G V+K   N  +   VA+KK    F +SE      K    E+  + Q  H N
Sbjct: 7   SKIGEGSYGVVFK-CRNRETGQIVAIKK----FVESEDDPVIKKIALREIRMLKQLKHPN 61

Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNW---KLRTEIAMGIAGGLFYLHE 617
           LV L+      +   LV+E+  + TV + L  +  P      L  +I       + + H+
Sbjct: 62  LVNLIEVFRRKRKLHLVFEYCDH-TVLNEL--EKNPRGVPEHLIKKIIWQTLQAVNFCHK 118

Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT-LDQSHTNTAIRGTKGYVAPEWFR 676
             C   IH D+KP+NIL+      ++ DFG A++LT     +T+        YVA  W+R
Sbjct: 119 HNC---IHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTD--------YVATRWYR 167

Query: 677 NMPITV-------KVDVYSYGVLLLEIIC 698
              + V        VDV++ G +  E++ 
Sbjct: 168 APELLVGDTQYGPPVDVWAIGCVFAELLT 196

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 64.5 bits (157), Expect = 2e-11
 Identities = 58/221 (26%), Positives = 101/221 (45%), Gaps = 30/221 (13%)

Query: 507 EELGRGAFGTVYKGFV--NMGSSNHVAVKKLN-SVFQDSEK-EFKAEVNGIGQTHHKNLV 562
           +++G G+FG   K  +  +        +K++N S     E+ E + EV  +    H N+V
Sbjct: 6   KKIGEGSFG---KAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIV 62

Query: 563 RLLGYCDEGQNRLLVYEFMSNGTV-------ASFLFG-DSKPNWKLRTEIAMGIAGGLFY 614
           +     +E  N  +V ++   G +          LF  D   +W ++      I   L +
Sbjct: 63  QYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQ------ICLALKH 116

Query: 615 LHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEW 674
           +H+    +I+H DIK QNI L      ++ DFG+A++L        T I GT  Y++PE 
Sbjct: 117 VHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELARTCI-GTPYYLSPEI 172

Query: 675 FRNMPITVKVDVYSYGVLLLEIICLRR-----NIDNEISKV 710
             N P   K D+++ G +L E+  L+      N+ N + K+
Sbjct: 173 CENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKI 213

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 65.4 bits (159), Expect = 2e-11
 Identities = 60/197 (30%), Positives = 93/197 (47%), Gaps = 9/197 (4%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVK--KLNSVFQDSEKEFK-AEVNGIGQTHHKNL 561
           F   LG+G+FG V       G+    A+K  K + V QD + E    E   +  +     
Sbjct: 4   FLMVLGKGSFGKVMLA-ERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPF 62

Query: 562 VRLLGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECC 620
           +  L  C +  +RL  V E+++ G +   +    +         A  IA GLF+LH +  
Sbjct: 63  LTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSK-- 120

Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPI 680
             II+ D+K  N++LD   + +I+DFG+ K    D   T T   GT  Y+APE     P 
Sbjct: 121 -GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFC-GTPDYIAPEIIAYQPY 178

Query: 681 TVKVDVYSYGVLLLEII 697
              VD +++GVLL E++
Sbjct: 179 GKSVDWWAFGVLLYEML 195

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 65.4 bits (159), Expect = 2e-11
 Identities = 59/194 (30%), Positives = 92/194 (47%), Gaps = 11/194 (5%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKL--NSVFQDSEKE---FKAEVNGIGQTHHKNLVR 563
           LG+G+FG V+   +  G++   A+K L  + V  D + E    +  V  +    H  L  
Sbjct: 3   LGKGSFGKVFLAELK-GTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW-EHPFLTH 60

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           L       +N   V E+++ G +   +    K +    T  A  I  GL +LH +    I
Sbjct: 61  LYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSK---GI 117

Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVK 683
           ++ D+K  NILLD   + +I+DFG+ K   L  + T T   GT  Y+APE          
Sbjct: 118 VYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFC-GTPDYIAPEILLGQKYNTS 176

Query: 684 VDVYSYGVLLLEII 697
           VD +S+GVLL E++
Sbjct: 177 VDWWSFGVLLYEML 190

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 64.6 bits (158), Expect = 3e-11
 Identities = 60/215 (27%), Positives = 107/215 (49%), Gaps = 27/215 (12%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   +  +   VA+KK+     ++E E        E++ + + +H N+
Sbjct: 5   EKIGEGTYGVVYKA-RDKLTGEIVALKKIR---LETEDEGVPSTAIREISLLKELNHPNI 60

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG----IAGGLFYLHE 617
           VRLL          LV+EF+ +  +  ++  DS P   L   +       +  G+ Y H 
Sbjct: 61  VRLLDVVHSENKLYLVFEFL-DLDLKKYM--DSSPLTGLDPPLIKSYLYQLLQGIAYCHS 117

Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD-QSHTNTAIRGTKGYVAPEWFR 676
               +++H D+KPQN+L+D     +++DFGLA+   +  +++T+  +  T  Y APE   
Sbjct: 118 H---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 172

Query: 677 NMP-ITVKVDVYSYGVLLLEIICLRRNI---DNEI 707
                +  VD++S G +  E +  RR +   D+EI
Sbjct: 173 GSRQYSTPVDIWSIGCIFAE-MVNRRPLFPGDSEI 206

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 64.2 bits (156), Expect = 3e-11
 Identities = 63/207 (30%), Positives = 98/207 (47%), Gaps = 22/207 (10%)

Query: 505 FKEELGRGAFGTVYKGFVNMGS-SNHVAVKKLNSVFQDSEKEFKA---EVNGIGQTHHKN 560
           F   +G+G++G V    V   +      +KKLN +   S +E KA   E   + Q  H N
Sbjct: 4   FVRVVGKGSYGEV--SLVRHRTDGKQYVIKKLN-LRNASRRERKAAEQEAQLLSQLKHPN 60

Query: 561 LVRLLGYCD--EGQNRLL--VYEFMSNGTVASFLFGDSKPNWKLRTEIA---MGIAGGLF 613
           +V    Y +  EG++ LL  V  F   G +   L  + K       ++    + IA  L 
Sbjct: 61  IV---AYRESWEGEDGLLYIVMGFCEGGDLYHKL-KEQKGKLLPENQVVEWFVQIAMALQ 116

Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE 673
           YLHE+    I+H D+K QN+ L      ++ D G+A++L       +T I GT  Y++PE
Sbjct: 117 YLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMASTLI-GTPYYMSPE 172

Query: 674 WFRNMPITVKVDVYSYGVLLLEIICLR 700
            F N P   K DV++ G  + E+  L+
Sbjct: 173 LFSNKPYNYKSDVWALGCCVYEMATLK 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 64.3 bits (156), Expect = 3e-11
 Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 15/199 (7%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKL--NSVFQDSEKEFKA---EVNGIGQTHHKNLVR 563
           LG+GAFG VY  + ++ +   +A K++  +    ++ KE  A   E+  +    H+ +V+
Sbjct: 10  LGQGAFGRVYLCY-DVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQ 68

Query: 564 LLGYC--DEGQNRLLVY-EFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECC 620
             G C  D  +  L ++ E+M  G+V   L         +  +    I  G+ YLH    
Sbjct: 69  YYG-CLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHS--- 124

Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLDQSHTNT-AIRGTKGYVAPEWFRNM 678
             I+H DIK  NIL D   N ++ DFG +K L T+  S T   ++ GT  +++PE     
Sbjct: 125 NMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGE 184

Query: 679 PITVKVDVYSYGVLLLEII 697
               K DV+S G  ++E++
Sbjct: 185 GYGRKADVWSLGCTVVEML 203

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 66.0 bits (161), Expect = 3e-11
 Identities = 37/96 (38%), Positives = 51/96 (53%), Gaps = 1/96 (1%)

Query: 612 LFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS-HTNTAIRGTKGYV 670
           L  +H      +IH DIK  NILL  +   ++ DFG +K+     S        GT  YV
Sbjct: 153 LLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYV 212

Query: 671 APEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNE 706
           APE +R  P + K D++S GVLL E++ L+R  D E
Sbjct: 213 APEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGE 248

Length = 496

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 63.8 bits (155), Expect = 4e-11
 Identities = 34/90 (37%), Positives = 55/90 (61%), Gaps = 4/90 (4%)

Query: 611 GLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV 670
           G+ ++HE+   +++H DIK +NI L  +   ++ DFG A+LLT   ++  T + GT  YV
Sbjct: 112 GVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYV-GTPYYV 167

Query: 671 APEWFRNMPITVKVDVYSYGVLLLEIICLR 700
            PE + NMP   K D++S G +L E+  L+
Sbjct: 168 PPEIWENMPYNNKSDIWSLGCILYELCTLK 197

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 64.3 bits (156), Expect = 4e-11
 Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 23/219 (10%)

Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-------AEVNGIGQTHHKN 560
           E+G GA+G V+K          VA+K++    Q  E+          A +  +    H N
Sbjct: 8   EIGEGAYGKVFKARDLKNGGRFVALKRVR--VQTGEEGMPLSTIREVAVLRHLETFEHPN 65

Query: 561 LVRLLGYC-----DEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLF 613
           +VRL   C     D      LV+E +    + ++L    +P     T  ++   +  GL 
Sbjct: 66  VVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMMFQLLRGLD 124

Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE 673
           +LH     +++H D+KPQNIL+      +++DFGLA++ +   + T+  +  T  Y APE
Sbjct: 125 FLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPE 179

Query: 674 WFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDK 712
                     VD++S G +  E+   R+ +    S VD+
Sbjct: 180 VLLQSSYATPVDLWSVGCIFAEMF-RRKPLFRGSSDVDQ 217

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 64.4 bits (157), Expect = 5e-11
 Identities = 67/213 (31%), Positives = 103/213 (48%), Gaps = 39/213 (18%)

Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE-FKA----EVNGIGQTHHKNLV 562
           ++G G +G VYK   +  +   VA+KK   V  D+EKE F      E+  + Q +H+N+V
Sbjct: 14  QIGEGTYGQVYKA-RDKDTGELVALKK---VRLDNEKEGFPITAIREIKILRQLNHRNIV 69

Query: 563 RLLGYCDEGQNRL----------LVYEFMSN---GTVASFLFGDSKPNWKLRTEIAMGIA 609
            L     + Q+ L          LV+E+M +   G + S L   S+ + K        + 
Sbjct: 70  NLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIK---SFMKQLL 126

Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS--HTNTAIRGTK 667
            GL Y H+      +H DIK  NILL++    +++DFGLA+L   ++S  +TN  I  T 
Sbjct: 127 EGLNYCHK---KNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVI--TL 181

Query: 668 GYVAPEWF----RNMPITVKVDVYSYGVLLLEI 696
            Y  PE      R  P    +DV+S G +L E+
Sbjct: 182 WYRPPELLLGEERYGP---AIDVWSCGCILGEL 211

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 64.3 bits (157), Expect = 5e-11
 Identities = 63/229 (27%), Positives = 98/229 (42%), Gaps = 49/229 (21%)

Query: 491 RCFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-- 548
           RC +  E  ++ R     +G G +G VY+   +  S   VA+KK   V  D+E++     
Sbjct: 2   RCRSVTEFEKLNR-----IGEGTYGIVYRA-RDTTSGEIVALKK---VRMDNERDGIPIS 52

Query: 549 ---EVNGIGQTHHKNLVRLL---------------GYCDEGQNRLLVYEFMSNGTVASFL 590
              E+  +    H N+V L                 YC++    LL  + M       F 
Sbjct: 53  SLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCEQDLASLL--DNMP----TPF- 105

Query: 591 FGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK 650
              S+   K    + + +  GL YLHE     IIH D+K  N+LL D    +I+DFGLA+
Sbjct: 106 ---SESQVKC---LMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLAR 156

Query: 651 LLTL-DQSHTNTAIRGTKGYVAPE-WFRNMPITVKVDVYSYGVLLLEII 697
              L  +  T   +  T  Y APE        T  +D+++ G +L E++
Sbjct: 157 TYGLPAKPMTPKVV--TLWYRAPELLLGCTTYTTAIDMWAVGCILAELL 203

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 64.1 bits (156), Expect = 5e-11
 Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 26/207 (12%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKNLVR 563
             +ELG+G +G+VYK   +  +   +A+K++     +S+  +   E++ + +     +V 
Sbjct: 5   VLDELGKGNYGSVYKVL-HRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVD 63

Query: 564 LLG-YCDEGQNRLLVY---EFMSNGTVASFLFGDS----KPNWKLRTEIAMGIAGGLFYL 615
             G +  EG     VY   E+M  G++     G       P   LR  I   +  GL +L
Sbjct: 64  FYGAFFIEGA----VYMCMEYMDAGSLDKLYAGGVATEGIPEDVLR-RITYAVVKGLKFL 118

Query: 616 HEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF 675
            EE    IIH D+KP N+L++ +   ++ DFG++  L    + TN    G + Y+APE  
Sbjct: 119 KEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTNI---GCQSYMAPERI 173

Query: 676 R------NMPITVKVDVYSYGVLLLEI 696
           +      N   TV+ DV+S G+ +LE+
Sbjct: 174 KSGGPNQNPTYTVQSDVWSLGLSILEM 200

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 63.5 bits (154), Expect = 5e-11
 Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 13/201 (6%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKL--NSVFQDSEKEFKA---EVNGIGQTHHKNLVR 563
           LG+GAFG VY  + +  +   +AVK++  +    ++ KE  A   E+  +    H+ +V+
Sbjct: 10  LGQGAFGRVYLCY-DADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQ 68

Query: 564 LLGYCDEGQNRLL--VYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
             G   +   R L    E M  G++   L         +  +    I  G+ YLH     
Sbjct: 69  YYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHS---N 125

Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLDQSHTN-TAIRGTKGYVAPEWFRNMP 679
            I+H DIK  NIL D   N ++ DFG +K L T+  S T   ++ GT  +++PE      
Sbjct: 126 MIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEG 185

Query: 680 ITVKVDVYSYGVLLLEIICLR 700
              K D++S G  ++E++  +
Sbjct: 186 YGRKADIWSVGCTVVEMLTEK 206

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 64.1 bits (156), Expect = 7e-11
 Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 34/203 (16%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS--EKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GAFG V      +   N VA+KK+   F      K    E+  +    H+N++ L  
Sbjct: 18  VGMGAFGLVCSARDQLTGQN-VAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISL-- 74

Query: 567 YCD----EGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM----GIAGGLFYLHEE 618
             D      ++   V E +    +   L   S+P   L  +        I  GL Y+H  
Sbjct: 75  -SDIFISPLEDIYFVTELLGT-DLHRLL--TSRP---LEKQFIQYFLYQILRGLKYVHS- 126

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE----W 674
               ++H D+KP NIL++++ + +I DFGLA++    Q    T    T+ Y APE    W
Sbjct: 127 --AGVVHRDLKPSNILINENCDLKICDFGLARI----QDPQMTGYVSTRYYRAPEIMLTW 180

Query: 675 FRNMPITVKVDVYSYGVLLLEII 697
            +     V+VD++S G +  E++
Sbjct: 181 QK---YDVEVDIWSAGCIFAEML 200

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 63.8 bits (155), Expect = 8e-11
 Identities = 75/300 (25%), Positives = 127/300 (42%), Gaps = 56/300 (18%)

Query: 509 LGRGAFGTVYK--GF-VNMGSSNH---VAVKKL--NSVFQD-----SEKEFKAEVNGIGQ 555
           LG G FG V +   + ++    +    VAVK L  N+  +D     SE E    +     
Sbjct: 20  LGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIG---- 75

Query: 556 THHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI----------- 604
             HKN++ LLG C +     ++ E+ + G +  FL     P      +I           
Sbjct: 76  -KHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFK 134

Query: 605 -----AMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLDQSH 658
                A  +A G+ YL    C   IH D+  +N+L+ +    +I+DFGLA+ +  +D   
Sbjct: 135 DLVSCAYQVARGMEYLESRRC---IHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYK 191

Query: 659 TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW 718
             +  R    ++APE   +   T + DV+S+G+L+ EI  L  +    I           
Sbjct: 192 KTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIP---------- 241

Query: 719 AYDRYQERTLEALVE-NDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV 777
                 E   + L E + ++  +N T  H   M+   C    P+ RPT +++ + L+ V+
Sbjct: 242 -----VEELFKLLREGHRMDKPSNCT--HELYMLMRECWHAVPTQRPTFKQLVEALDKVL 294

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 63.8 bits (155), Expect = 8e-11
 Identities = 63/215 (29%), Positives = 98/215 (45%), Gaps = 33/215 (15%)

Query: 495 YKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS--EKEFKAEVNG 552
           Y++L +V        G GA+GTV    ++  +   VA+KKL   FQ     K    E+  
Sbjct: 17  YRDLKQV--------GSGAYGTVCSA-LDRRTGAKVAIKKLYRPFQSELFAKRAYRELRL 67

Query: 553 IGQTHHKNLVRLLGY------CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM 606
           +    H+N++ LL         D   +  LV  FM  GT    L    K +      +  
Sbjct: 68  LKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM--GTDLGKLMKHEKLSEDRIQFLVY 125

Query: 607 GIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRG- 665
            +  GL Y+H      IIH D+KP N+ +++    +I DFGLA+        T++ + G 
Sbjct: 126 QMLKGLKYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR-------QTDSEMTGY 175

Query: 666 --TKGYVAPEWFRN-MPITVKVDVYSYGVLLLEII 697
             T+ Y APE   N M  T  VD++S G ++ E++
Sbjct: 176 VVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEML 210

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 63.8 bits (155), Expect = 8e-11
 Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 32/204 (15%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE---KEFKAEVNGIGQTHHKNLVRLL 565
           +G GA+G+V    ++  +   VA+KKL+  FQ SE   K    E+  +    H+N++ LL
Sbjct: 23  VGSGAYGSVCSA-IDKRTGEKVAIKKLSRPFQ-SEIFAKRAYRELTLLKHMQHENVIGLL 80

Query: 566 GY------CDEGQNRLLVYEFMSN--GTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                    DE Q+  LV  +M      +      + K  + +   +      GL Y+H 
Sbjct: 81  DVFTSAVSGDEFQDFYLVMPYMQTDLQKIMGHPLSEDKVQYLVYQMLC-----GLKYIHS 135

Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRG---TKGYVAPEW 674
                IIH D+KP N+ +++    +I DFGLA+       H +  + G   T+ Y APE 
Sbjct: 136 ---AGIIHRDLKPGNLAVNEDCELKILDFGLAR-------HADAEMTGYVVTRWYRAPEV 185

Query: 675 FRN-MPITVKVDVYSYGVLLLEII 697
             N M     VD++S G ++ E++
Sbjct: 186 ILNWMHYNQTVDIWSVGCIMAEML 209

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 64.0 bits (156), Expect = 9e-11
 Identities = 59/200 (29%), Positives = 91/200 (45%), Gaps = 21/200 (10%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA G V   + +  +  +VA+KKL+  FQ+    K    E+  +   +HKN++ LL 
Sbjct: 24  IGSGAQGIVCAAY-DTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLN 82

Query: 567 Y------CDEGQNRLLVYEFMSNG--TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
                   +E Q+  LV E M      V        + ++ L   +      G+ +LH  
Sbjct: 83  VFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLC-----GIKHLHS- 136

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               IIH D+KP NI++      +I DFGLA+  T   S   T    T+ Y APE    M
Sbjct: 137 --AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 192

Query: 679 PITVKVDVYSYGVLLLEIIC 698
                VD++S G ++ E+I 
Sbjct: 193 GYKENVDIWSVGCIMGEMIR 212

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 63.3 bits (154), Expect = 1e-10
 Identities = 57/200 (28%), Positives = 102/200 (51%), Gaps = 22/200 (11%)

Query: 509 LGRGAFGTVYKGFVNMGS-SNHV----AVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVR 563
           LG+G+FG V+      G  +  +     +KK     +D  +  K E + + + +H  +V+
Sbjct: 4   LGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRT-KMERDILAEVNHPFIVK 62

Query: 564 LLGYCDEGQNRL-LVYEFMSNGTVASFL-----FGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           L  Y  + + +L L+ +F+  G + + L     F +    + L  E+A+     L +LH 
Sbjct: 63  L-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL-AELALA----LDHLHS 116

Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                II+ D+KP+NILLD+  + +++DFGL+K  ++D      +  GT  Y+APE    
Sbjct: 117 ---LGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYMAPEVVNR 172

Query: 678 MPITVKVDVYSYGVLLLEII 697
              T   D +S+GVL+ E++
Sbjct: 173 RGHTQSADWWSFGVLMFEML 192

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 62.8 bits (152), Expect = 1e-10
 Identities = 61/196 (31%), Positives = 93/196 (47%), Gaps = 17/196 (8%)

Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEK--EFKAEVNGIGQTHHKNLVRL 564
           E+G G+FG VY    ++ ++  VA+KK++ S  Q +EK  +   EV  + +  H N +  
Sbjct: 32  EIGHGSFGAVYFAR-DVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEY 90

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR-TEIAMGIAGGLFYLHEECCTQI 623
            G         LV E+   G+ +  L    KP  ++    I  G   GL YLH      +
Sbjct: 91  KGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NM 146

Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM---PI 680
           IH DIK  NILL +    +++DFG A + +   S       GT  ++APE    M     
Sbjct: 147 IHRDIKAGNILLTEPGQVKLADFGSASIASPANSFV-----GTPYWMAPEVILAMDEGQY 201

Query: 681 TVKVDVYSYGVLLLEI 696
             KVDV+S G+  +E+
Sbjct: 202 DGKVDVWSLGITCIEL 217

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 63.3 bits (154), Expect = 2e-10
 Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 37/177 (20%)

Query: 608 IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK 667
           +A G+ +L  + C   IH D+  +N+LL D   A+I DFGLA+ +  D   +N  ++G  
Sbjct: 221 VAQGMDFLASKNC---IHRDVAARNVLLTDGRVAKICDFGLARDIMND---SNYVVKGNA 274

Query: 668 ----GYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRN------IDNEISKVDKAILTD 717
                ++APE   +   TV+ DV+SYG+LL EI  L ++      ++++  K+ K     
Sbjct: 275 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVK----- 329

Query: 718 WAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
                YQ      +   D       +     +M   W +  +P+ RPT  +++Q+++
Sbjct: 330 ---RGYQ------MSRPDFAPPEIYS-----IMKMCWNL--EPTERPTFSQISQLIQ 370

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 63.2 bits (154), Expect = 2e-10
 Identities = 61/211 (28%), Positives = 92/211 (43%), Gaps = 41/211 (19%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLL- 565
           +G GAFG V+    +      VA+KK+ +VFQ+  S K    E+  +    H N++  L 
Sbjct: 8   IGYGAFGVVW-SVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALD 66

Query: 566 ----GYCDEGQNRLLVYEFM--------------SNGTVASFLFGDSKPNWKLRTEIAMG 607
                + D  +   +V E M              S+  V  FL+                
Sbjct: 67  ILQPPHIDPFEEIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQ--------------- 111

Query: 608 IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK 667
           I  GL YLH      I+H DIKP N+L++ +   +I DFGLA++   D+S   T    T+
Sbjct: 112 ILRGLKYLHS---AGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQ 168

Query: 668 GYVAPEWFRNMP-ITVKVDVYSYGVLLLEII 697
            Y APE        T  VD++S G +  E++
Sbjct: 169 YYRAPEILMGSRHYTSAVDIWSVGCIFAELL 199

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 62.8 bits (153), Expect = 2e-10
 Identities = 56/224 (25%), Positives = 87/224 (38%), Gaps = 60/224 (26%)

Query: 508 ELGRGAFGTVYKG-FVNMGSSNHVAVKKLNSVFQDS--------EKEFKAEVNGIGQTHH 558
           ELG+GA+G V             VA+KK+ +VF           E +      G     H
Sbjct: 7   ELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRG-----H 61

Query: 559 KNLVRL--LGYCDEGQ-NRLLVY-EFM--------------SNGTVASFLFGDSKPNWKL 600
           KN+  L  +     G  N L +Y E M              ++    SF++         
Sbjct: 62  KNITCLYDMDIVFPGNFNELYLYEELMEADLHQIIRSGQPLTDAHFQSFIYQ-------- 113

Query: 601 RTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN 660
                  I  GL Y+H      ++H D+KP N+L++     +I DFGLA+  + +     
Sbjct: 114 -------ILCGLKYIHS---ANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENA 163

Query: 661 TAIRGTKGYVAPEWFR-------NMPITVKVDVYSYGVLLLEII 697
             +     YVA  W+R           T  +DV+S G +L E++
Sbjct: 164 GFM---TEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELL 204

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 62.9 bits (153), Expect = 2e-10
 Identities = 59/201 (29%), Positives = 102/201 (50%), Gaps = 23/201 (11%)

Query: 506 KEELGRGAFGTVYKGFVNMGSSNHVAVK--KLNSVFQDSEKEFKAEVNGIGQT-HHKNLV 562
            E LG G+FG V +   + G+  + A+K  K   + +  + +  A+   I     H  +V
Sbjct: 23  GETLGTGSFGRV-RIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIV 81

Query: 563 RLL-GYCDEGQNRL-LVYEFMSNGTVASFLFGDSK-PNWKLR---TEIAMGIAGGLFYLH 616
            ++  + DE  NR+  + EF+  G + + L    + PN   +    E+ +       YLH
Sbjct: 82  NMMCSFQDE--NRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFE----YLH 135

Query: 617 EECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR 676
            +    II+ D+KP+N+LLD+  + +++DFG AK +  D++ T   + GT  Y+APE  +
Sbjct: 136 SK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVP-DRTFT---LCGTPEYLAPEVIQ 188

Query: 677 NMPITVKVDVYSYGVLLLEII 697
           +      VD ++ GVLL E I
Sbjct: 189 SKGHGKAVDWWTMGVLLYEFI 209

Length = 329

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 62.6 bits (152), Expect = 2e-10
 Identities = 40/107 (37%), Positives = 58/107 (54%), Gaps = 5/107 (4%)

Query: 612 LFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVA 671
           L  LH+     +I+ D+KP+NILLD   +  + DFGL KL   D   TNT   GT  Y+A
Sbjct: 106 LENLHK---FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFC-GTPEYLA 161

Query: 672 PEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTD 717
           PE       T  VD ++ GVLL E++  L    D  ++++ + IL +
Sbjct: 162 PELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQE 208

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 62.5 bits (152), Expect = 2e-10
 Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 11/194 (5%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNS--VFQDSEKE---FKAEVNGIGQTHHKNLVR 563
           LG+G+FG V    +  G++   A+K L    V +D + E    +  V  +    H  L  
Sbjct: 3   LGKGSFGKVMLAELK-GTNEFFAIKALKKDVVLEDDDVECTMVERRVLALA-WEHPFLTH 60

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           L       ++   V E+++ G +   +    + +       A  I  GL +LH++    I
Sbjct: 61  LFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKK---GI 117

Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVK 683
           I+ D+K  N+LLD   + +I+DFG+ K     +   +T   GT  Y+APE  +       
Sbjct: 118 IYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFC-GTPDYIAPEILKGQKYNES 176

Query: 684 VDVYSYGVLLLEII 697
           VD +S+GVLL E++
Sbjct: 177 VDWWSFGVLLYEML 190

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 62.0 bits (150), Expect = 3e-10
 Identities = 59/197 (29%), Positives = 91/197 (46%), Gaps = 19/197 (9%)

Query: 508 ELGRGAFGTVYKGFVNMGSSNHV-AVKKLN-SVFQDSEK--EFKAEVNGIGQTHHKNLVR 563
           E+G G+FG VY  F     ++ V A+KK++ S  Q +EK  +   EV  + +  H N ++
Sbjct: 22  EIGHGSFGAVY--FARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ 79

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR-TEIAMGIAGGLFYLHEECCTQ 622
             G         LV E+   G+ +  L    KP  ++    +  G   GL YLH      
Sbjct: 80  YRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---N 135

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM---P 679
           +IH D+K  NILL +    ++ DFG A ++            GT  ++APE    M    
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVILAMDEGQ 190

Query: 680 ITVKVDVYSYGVLLLEI 696
              KVDV+S G+  +E+
Sbjct: 191 YDGKVDVWSLGITCIEL 207

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 61.9 bits (151), Expect = 3e-10
 Identities = 65/232 (28%), Positives = 99/232 (42%), Gaps = 54/232 (23%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE-FKA----EVNGIGQTHHKNL 561
            +LG G FG VYK    + +   VA+KK+      +EK+ F      E+  + +  H N+
Sbjct: 14  GKLGEGTFGEVYKA-RQIKTGRVVALKKI---LMHNEKDGFPITALREIKILKKLKHPNV 69

Query: 562 VRLLG----YCDEGQN-RLLVYEFMSNGTVASFLFGD-----SKPNWKLRTE-----IAM 606
           V L+       D+ +  R  VY       V  ++  D       P+ KL TE       +
Sbjct: 70  VPLIDMAVERPDKSKRKRGSVY------MVTPYMDHDLSGLLENPSVKL-TESQIKCYML 122

Query: 607 GIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT------------L 654
            +  G+ YLH      I+H DIK  NIL+D+    +I+DFGLA+                
Sbjct: 123 QLLEGINYLH---ENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGG 179

Query: 655 DQSHTNTAIRGTKGYVAPEWF---RNMPITVKVDVYSYGVLLLEIICLRRNI 703
            + +TN  +  T+ Y  PE     R    T  VD++  G +  E+   RR I
Sbjct: 180 TRKYTNLVV--TRWYRPPELLLGERRY--TTAVDIWGIGCVFAEMF-TRRPI 226

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 61.9 bits (150), Expect = 3e-10
 Identities = 61/194 (31%), Positives = 93/194 (47%), Gaps = 11/194 (5%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNS---VFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           +G+G+FG V      +    + AVK L     + +  +K   AE N + +      +  L
Sbjct: 3   IGKGSFGKVLLAKRKLDGKCY-AVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGL 61

Query: 566 GYCDEGQNRL-LVYEFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
            Y  +   +L  V +F++ G +   L  + S P  + R   A  IA  L YLH      I
Sbjct: 62  HYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAE-IASALGYLHS---INI 117

Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVK 683
           ++ D+KP+NILLD   +  ++DFGL K   + QS T T   GT  Y+APE  R  P    
Sbjct: 118 VYRDLKPENILLDSQGHVVLTDFGLCK-EGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNT 176

Query: 684 VDVYSYGVLLLEII 697
           VD +  G +L E++
Sbjct: 177 VDWWCLGAVLYEML 190

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 62.0 bits (150), Expect = 4e-10
 Identities = 60/210 (28%), Positives = 92/210 (43%), Gaps = 37/210 (17%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 25  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 83

Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 84  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIHS 138

Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 139 ---ADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 185

Query: 678 -------MPITVKVDVYSYGVLLLEIICLR 700
                  M     VD++S G ++ E++  R
Sbjct: 186 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 215

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 61.4 bits (149), Expect = 4e-10
 Identities = 73/295 (24%), Positives = 132/295 (44%), Gaps = 57/295 (19%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRL 564
           E++G G +G VYK   +  ++  +A+KK+    +D      A  E++ + +  H N+VRL
Sbjct: 8   EKIGEGTYGVVYKA-RDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRL 66

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNW----KLRTEIAMGIAGGLFYLHEECC 620
                  +   LV+E++ +  +   +  DS P++    +L       I  G+ Y H    
Sbjct: 67  QDVVHSEKRLYLVFEYL-DLDLKKHM--DSSPDFAKNPRLIKTYLYQILRGIAYCHSH-- 121

Query: 621 TQIIHCDIKPQNILLDDHYNA-RISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP 679
            +++H D+KPQN+L+D   NA +++DFGLA+   +        +R     V   W+R   
Sbjct: 122 -RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGI-------PVRTFTHEVVTLWYRAPE 173

Query: 680 I-------TVKVDVYSYGVLLLEIICLRRNI--DNEISKVDK----------------AI 714
           I       +  VD++S G +  E++  +     D+EI ++ K                  
Sbjct: 174 ILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTS 233

Query: 715 LTDW--AYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMR 767
           L D+  A+ ++  + L  +V   LE    V +L + + +       DPS R T R
Sbjct: 234 LPDYKSAFPKWPPKDLATVVPT-LEP-AGVDLLSKMLRL-------DPSKRITAR 279

Length = 294

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 62.0 bits (150), Expect = 5e-10
 Identities = 58/200 (29%), Positives = 91/200 (45%), Gaps = 21/200 (10%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   + +     +VA+KKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 32  IGSGAQGIVCAAY-DAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN 90

Query: 567 Y------CDEGQNRLLVYEFMSNG--TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
                   +E Q+  +V E M      V        + ++ L   +      G+ +LH  
Sbjct: 91  VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHS- 144

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               IIH D+KP NI++      +I DFGLA+  T   S   T    T+ Y APE    M
Sbjct: 145 --AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 200

Query: 679 PITVKVDVYSYGVLLLEIIC 698
                VD++S G ++ E+I 
Sbjct: 201 GYKENVDIWSVGCIMGEMIK 220

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 60.9 bits (148), Expect = 5e-10
 Identities = 53/219 (24%), Positives = 89/219 (40%), Gaps = 51/219 (23%)

Query: 512 GAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEF--KAEVNGIGQT------------- 556
           G FG ++ G              L       E+E   K   +   +              
Sbjct: 17  GTFGRIFYG-------------ILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLY 63

Query: 557 --HHKNLVRLLGYCDEGQNRLLV-YEFMSNGTVASFL----FGDSKPNWKLRT----EIA 605
              H+N++ +L  C E      V Y +M+ G +  FL     G++     L T     +A
Sbjct: 64  GLSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMA 123

Query: 606 MGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT-----N 660
           + IA G+ YLH+     +IH DI  +N ++D+    +I+D  L++ L     H      N
Sbjct: 124 IQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNEN 180

Query: 661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
             ++    ++A E   N   +   DV+S+GVLL E++ L
Sbjct: 181 RPVK----WMALESLVNKEYSSASDVWSFGVLLWELMTL 215

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 61.2 bits (148), Expect = 7e-10
 Identities = 61/198 (30%), Positives = 93/198 (46%), Gaps = 19/198 (9%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   F  +   N VAVKKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 29  IGSGAQGIVCAAFDTVLGIN-VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLN 87

Query: 567 Y------CDEGQNRLLVYEFM-SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEEC 619
                   +E Q+  LV E M +N      +  D +    L  ++  GI     +LH   
Sbjct: 88  VFTPQKSLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIK----HLHS-- 141

Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP 679
              IIH D+KP NI++      +I DFGLA+    +   T   +  T+ Y APE    M 
Sbjct: 142 -AGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVV--TRYYRAPEVILGMG 198

Query: 680 ITVKVDVYSYGVLLLEII 697
               VD++S G ++ E++
Sbjct: 199 YKENVDIWSVGCIMGELV 216

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 61.1 bits (148), Expect = 7e-10
 Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 16/199 (8%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKLNSVFQDSEKEFK---AEVNGIGQTHHKNLVRL 564
           +G+G FG VY+  V    +  + A+K L+     ++KE      E N + +T       +
Sbjct: 1   IGKGTFGQVYQ--VRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFI 58

Query: 565 LGYCDEGQ---NRLLVYEFMSNGTVASFLFGDSK-PNWKLRTEIAMGIAGGLFYLHEECC 620
           +G     Q   +  LV ++MS G +   L  + +    + +  IA  +   L +LH+   
Sbjct: 59  VGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLA-LEHLHKY-- 115

Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE-WFRNMP 679
             I++ D+KP+NILLD   +  + DFGL+K    D   TNT   GT  Y+APE       
Sbjct: 116 -DIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFC-GTTEYLAPEVLLDEKG 173

Query: 680 ITVKVDVYSYGVLLLEIIC 698
            T  VD +S GVL+ E+ C
Sbjct: 174 YTKHVDFWSLGVLVFEMCC 192

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 60.2 bits (146), Expect = 7e-10
 Identities = 71/290 (24%), Positives = 121/290 (41%), Gaps = 64/290 (22%)

Query: 507 EELGRGAFGTVYKGF---VNMGSSNH---VAVKKLNSVFQDSEKEFKAEVNGIGQTHHKN 560
           E LG+G F  ++KG    V      H   V +K L+   ++  + F    + + Q  HK+
Sbjct: 1   ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKH 60

Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPN-------WKLRTEIAMGIAGGLF 613
           LV   G C  G   ++V E++  G++ ++L    K N       WKL  E+A  +A  L 
Sbjct: 61  LVLNYGVCVCGDESIMVQEYVKFGSLDTYL----KKNKNLINISWKL--EVAKQLAWALH 114

Query: 614 YLHEECCTQIIHCDIKPQNILL----DDHYNA----RISDFG-----LAKLLTLDQSHTN 660
           +L ++    + H ++  +N+LL    D         ++SD G     L K + L++    
Sbjct: 115 FLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKEILLERI--- 168

Query: 661 TAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWA 719
                   +V PE   N   +++  D +S+G  L EI       D  +S +D      + 
Sbjct: 169 -------PWVPPECIENPQNLSLAADKWSFGTTLWEIFS---GGDKPLSALDSQKKLQFY 218

Query: 720 YDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKV 769
            DR+Q   L A    +L  + N             C+  +P  RP+ R +
Sbjct: 219 EDRHQ---LPAPKWTELANLINQ------------CMDYEPDFRPSFRAI 253

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 60.0 bits (145), Expect = 7e-10
 Identities = 60/286 (20%), Positives = 119/286 (41%), Gaps = 50/286 (17%)

Query: 506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ----DSEKEFKAEVNGIGQTHHKNL 561
           ++++GRG F  VY+    +     VA+KK+  +F+     + ++   E++ + Q +H N+
Sbjct: 7   EKKIGRGQFSEVYRATCLL-DRKPVALKKVQ-IFEMMDAKARQDCVKEIDLLKQLNHPNV 64

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPN--------WKLRTEIAMGIAGGLF 613
           ++ L    E     +V E    G ++  +    K          WK   ++   +     
Sbjct: 65  IKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVE---- 120

Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE 673
           ++H     +++H DIKP N+ +      ++ D GL +  +   +  ++ + GT  Y++PE
Sbjct: 121 HMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSPE 176

Query: 674 WFRNMPITVKVDVYSYGVLLLEIICL-------RRNIDNEISKVDKAILTDWAYDRYQER 726
                    K D++S G LL E+  L       + N+ +   K+++        + Y E+
Sbjct: 177 RIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEK 236

Query: 727 TLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM 772
                   +L +M               CI  DP  RP +  V Q+
Sbjct: 237 L------RELVSM---------------CIYPDPDQRPDIGYVHQI 261

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 60.7 bits (147), Expect = 8e-10
 Identities = 74/277 (26%), Positives = 120/277 (43%), Gaps = 24/277 (8%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKL--NSVFQDSEKEFKAEVNGIGQTHHKN--LVRL 564
           LG+G+FG V    +  G   + AVK L  + V  D + E       +     +N  L  L
Sbjct: 3   LGKGSFGKVLLAELK-GKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHL 61

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
                  ++   V EF++ G +   +    + +    T  A  I  GL +LH +    II
Sbjct: 62  YCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSK---GII 118

Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKV 684
           + D+K  N++LD   + +I+DFG+ K      +  +T   GT  Y+APE  + +  T  V
Sbjct: 119 YRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFC-GTPDYIAPEILQGLKYTFSV 177

Query: 685 DVYSYGVLLLEIICLRRNI--DNEISKVDKAILTDWAYDRY----QERTLEALVEND--- 735
           D +S+GVLL E++  +     D+E    +   +    Y R+     +  LE L E D   
Sbjct: 178 DWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDILEKLFERDPTR 237

Query: 736 -LEAMNNVTMLHRFVMVAFWCIQE----DPSHRPTMR 767
            L  + N+   H F     W   E    DP  +P ++
Sbjct: 238 RLGVVGNIR-GHPFFKTINWTALEKRELDPPFKPKVK 273

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 60.4 bits (146), Expect = 9e-10
 Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 5/172 (2%)

Query: 526 SSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGT 585
           S   VAVK ++   Q   +    EV  +    H+N+V +      G+   ++ EF+  G 
Sbjct: 45  SGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA 104

Query: 586 VASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISD 645
           +   +   ++ N +    +   +   L YLH +    +IH DIK  +ILL      ++SD
Sbjct: 105 LTD-IVSQTRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSD 160

Query: 646 FGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEII 697
           FG    ++ D     + + GT  ++APE     P   +VD++S G++++E++
Sbjct: 161 FGFCAQISKDVPKRKSLV-GTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMV 211

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 60.5 bits (147), Expect = 1e-09
 Identities = 32/94 (34%), Positives = 58/94 (61%), Gaps = 5/94 (5%)

Query: 603 EIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA 662
           +I++ +  GL YL E+   +I+H D+KP NIL++     ++ DFG++  L    S  N+ 
Sbjct: 103 KISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSF 158

Query: 663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEI 696
           + GT+ Y++PE  +    TV+ D++S G+ L+E+
Sbjct: 159 V-GTRSYMSPERLQGTHYTVQSDIWSLGLSLVEM 191

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 59.8 bits (145), Expect = 1e-09
 Identities = 52/217 (23%), Positives = 92/217 (42%), Gaps = 56/217 (25%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE-----FKAEVNGIGQTHHKNL 561
           E++G G +GTV+K   N  +   VA+K+   V  D + E        E+  + +  HKN+
Sbjct: 6   EKIGEGTYGTVFKA-KNRETHEIVALKR---VRLDDDDEGVPSSALREICLLKELKHKNI 61

Query: 562 VRLLGYCDEGQNRLLVYEF---------------MSNGTVASFLFGDSKPNWKLRTEIAM 606
           VRL       +   LV+E+               +    V SF+F        L+     
Sbjct: 62  VRLYDVLHSDKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQ------LLK----- 110

Query: 607 GIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGT 666
               GL + H      ++H D+KPQN+L++ +   +++DFGLA+   +        +R  
Sbjct: 111 ----GLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGI-------PVRCY 156

Query: 667 KGYVAPEWFRNMPI-------TVKVDVYSYGVLLLEI 696
              V   W+R   +       +  +D++S G +  E+
Sbjct: 157 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 193

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 60.4 bits (146), Expect = 1e-09
 Identities = 40/137 (29%), Positives = 74/137 (54%), Gaps = 5/137 (3%)

Query: 579 EFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH 638
           E M  G++   L    +   ++  ++++ +  GL YL E+   QI+H D+KP NIL++  
Sbjct: 83  EHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSR 140

Query: 639 YNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC 698
              ++ DFG++  L    S  N+ + GT+ Y++PE  +    +V+ D++S G+ L+E+  
Sbjct: 141 GEIKLCDFGVSGQLI--DSMANSFV-GTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAI 197

Query: 699 LRRNIDNEISKVDKAIL 715
            R  I    +K  +AI 
Sbjct: 198 GRYPIPPPDAKELEAIF 214

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 59.9 bits (145), Expect = 1e-09
 Identities = 61/227 (26%), Positives = 97/227 (42%), Gaps = 39/227 (17%)

Query: 505 FKEELGRGAFGTVY------------KGFVNMGSSNH---VAVKKLNS-VFQDSEKEFKA 548
           FKE+LG G FG V+            K F    S N    VAVK L     +++  +F  
Sbjct: 9   FKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLK 68

Query: 549 EVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTE----- 603
           E+  + +    N++RLL  C       ++ E+M NG +  FL          + +     
Sbjct: 69  EIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTIS 128

Query: 604 ------IAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS 657
                 +A  IA G+ YL        +H D+  +N L+  +Y  +I+DFG+++ L    S
Sbjct: 129 YSTLIFMATQIASGMKYLSS---LNFVHRDLATRNCLVGKNYTIKIADFGMSRNL---YS 182

Query: 658 HTNTAIRGTKGYVAPEWFRNMPI-----TVKVDVYSYGVLLLEIICL 699
                I+G +  +   W     I     T   DV+++GV L EI+ L
Sbjct: 183 GDYYRIQG-RAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTL 228

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 59.8 bits (145), Expect = 1e-09
 Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 50/226 (22%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA----EVNGIGQTHHKNLV 562
           E+LG G + TVYKG  N  +   VA+K+++    D+E+   +    E++ + +  H+N+V
Sbjct: 6   EKLGEGTYATVYKG-RNRTTGEIVALKEIH---LDAEEGTPSTAIREISLMKELKHENIV 61

Query: 563 RLLGYCDEGQNRLLVYEFMSN-----------------GTVASFLFGDSKPNWKLRTEIA 605
           RL          +LV+E+M                    TV SF +           ++ 
Sbjct: 62  RLHDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTY-----------QLL 110

Query: 606 MGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD-QSHTNTAIR 664
            GIA    + HE    +++H D+KPQN+L++     +++DFGLA+   +   + +N  + 
Sbjct: 111 KGIA----FCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVV- 162

Query: 665 GTKGYVAPE-WFRNMPITVKVDVYSYGVLLLEIIC---LRRNIDNE 706
            T  Y AP+    +   +  +D++S G ++ E+I    L    +NE
Sbjct: 163 -TLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNE 207

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 59.6 bits (145), Expect = 1e-09
 Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 24/203 (11%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQ-------THHKNL 561
           +G G F  V K   +  +  + A+K +   F+  E     +VN + +       + H N+
Sbjct: 7   IGEGTFSEVLKA-QSRKTGKYYAIKCMKKHFKSLE-----QVNNLREIQALRRLSPHPNI 60

Query: 562 VRLLGYC-DEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAM-GIAGGLFYLHEE 618
           +RL+    D    RL LV+E M +  +   + G  +P  + R +  M  +   L ++H  
Sbjct: 61  LRLIEVLFDRKTGRLALVFELM-DMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRN 119

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               I H DIKP+NIL+ D    +++DFG  +   +      T    T+ Y APE     
Sbjct: 120 ---GIFHRDIKPENILIKD-DILKLADFGSCR--GIYSKPPYTEYISTRWYRAPECLLTD 173

Query: 679 PI-TVKVDVYSYGVLLLEIICLR 700
                K+D+++ G +  EI+ L 
Sbjct: 174 GYYGPKMDIWAVGCVFFEILSLF 196

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 59.2 bits (143), Expect = 2e-09
 Identities = 61/237 (25%), Positives = 100/237 (42%), Gaps = 47/237 (19%)

Query: 505 FKEELGRGAFGTVYKGFV-------------NM--GSSNHVAVKKLNS-VFQDSEKEFKA 548
           FKE+LG G FG V+   V             N+  G    VAVK L     +++  +F  
Sbjct: 9   FKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLK 68

Query: 549 EVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFL-------------FGDSK 595
           EV  + +    N++RLLG C +     ++ E+M NG +  FL                  
Sbjct: 69  EVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPP 128

Query: 596 ------PNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLA 649
                  ++     +A+ IA G+ YL        +H D+  +N L+ ++   +I+DFG++
Sbjct: 129 AHCLPAISYSSLLHVALQIASGMKYLSS---LNFVHRDLATRNCLVGENLTIKIADFGMS 185

Query: 650 KLLTLD-----QSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRR 701
           + L        Q      IR    ++A E       T   DV+++GV L EI+ L +
Sbjct: 186 RNLYAGDYYRIQGRAVLPIR----WMAWECILMGKFTTASDVWAFGVTLWEILMLCK 238

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 59.3 bits (144), Expect = 2e-09
 Identities = 55/186 (29%), Positives = 87/186 (46%), Gaps = 33/186 (17%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE-FKA----EVNGIGQTHHKNLVR 563
           +G+G FG V+K   +  +   VA+KK   V  ++EKE F      E+  +    H+N+V 
Sbjct: 20  IGQGTFGEVFKA-RHKKTKQIVALKK---VLMENEKEGFPITALREIKILQLLKHENVVN 75

Query: 564 LLGYCD---EGQNR-----LLVYEFMSNGTVASFLFGDSKPNWK-----LRTEIAMGIAG 610
           L+  C       NR      LV+EF  +  +A  L   S  N K     ++  + M +  
Sbjct: 76  LIEICRTKATPYNRYKGSFYLVFEFCEH-DLAGLL---SNKNVKFTLSEIKKVMKM-LLN 130

Query: 611 GLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK---LLTLDQSHTNTAIRGTK 667
           GL+Y+H     +I+H D+K  NIL+      +++DFGLA+   L    + +  T    T 
Sbjct: 131 GLYYIHR---NKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTL 187

Query: 668 GYVAPE 673
            Y  PE
Sbjct: 188 WYRPPE 193

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 58.8 bits (142), Expect = 3e-09
 Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 4/93 (4%)

Query: 605 AMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR 664
           A  +A  + YLH      II+ D+KP+NILLD   +  ++DFGL K   ++   T +   
Sbjct: 102 AAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCK-EGVEPEETTSTFC 157

Query: 665 GTKGYVAPEWFRNMPITVKVDVYSYGVLLLEII 697
           GT  Y+APE  R  P    VD +  G +L E++
Sbjct: 158 GTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEML 190

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 58.9 bits (142), Expect = 4e-09
 Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 21/199 (10%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   +  +   N VA+KKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 25  IGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN 83

Query: 567 Y------CDEGQNRLLVYEFMSNG--TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
                   +E Q+  LV E M      V        + ++ L   +      G+ +LH  
Sbjct: 84  VFTPQKSLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHS- 137

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               IIH D+KP NI++      +I DFGLA+  T   S   T    T+ Y APE    M
Sbjct: 138 --AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 193

Query: 679 PITVKVDVYSYGVLLLEII 697
                VD++S G ++ E++
Sbjct: 194 GYKENVDIWSVGCIMGEMV 212

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 59.1 bits (143), Expect = 4e-09
 Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 37/177 (20%)

Query: 608 IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK 667
           +A G+ +L  + C   IH D+  +NILL      +I DFGLA+ +  D   +N  ++G  
Sbjct: 223 VAKGMSFLASKNC---IHRDLAARNILLTHGRITKICDFGLARDIRND---SNYVVKGNA 276

Query: 668 ----GYVAPEWFRNMPITVKVDVYSYGVLLLEIICL------RRNIDNEISKVDKAILTD 717
                ++APE   N   T + DV+SYG+LL EI  L         +D++  K+ K     
Sbjct: 277 RLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIK----- 331

Query: 718 WAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
              + Y+  + E       + M +             C   DP  RPT +++ Q++E
Sbjct: 332 ---EGYRMLSPECAPSEMYDIMKS-------------CWDADPLKRPTFKQIVQLIE 372

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 59.5 bits (144), Expect = 4e-09
 Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 14/152 (9%)

Query: 511 RGAFGTVYKGFVNMGSSNHV--AVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYC 568
           RGAFG VY G     S  +    VKK + + ++   + +AE + +  +    +V L    
Sbjct: 14  RGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSL 73

Query: 569 DEGQNRLLVYEFMSNGTVASFL--FG--DSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
               N  LV E++  G V S L  +G  D +   K  +E+A+     L YLH      II
Sbjct: 74  QSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALA----LDYLHRH---GII 126

Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQ 656
           H D+KP N+L+ +  + +++DFGL+K +TL++
Sbjct: 127 HRDLKPDNMLISNEGHIKLTDFGLSK-VTLNR 157

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 58.5 bits (141), Expect = 4e-09
 Identities = 34/118 (28%), Positives = 67/118 (56%), Gaps = 5/118 (4%)

Query: 579 EFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH 638
           E M  G++   L    +   ++  ++++ +  GL YL E+   +I+H D+KP NIL++  
Sbjct: 83  EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSR 140

Query: 639 YNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEI 696
              ++ DFG++  L    S  N+ + GT+ Y++PE  +    +V+ D++S G+ L+E+
Sbjct: 141 GEIKLCDFGVSGQLI--DSMANSFV-GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEM 195

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 57.6 bits (139), Expect = 5e-09
 Identities = 65/271 (23%), Positives = 119/271 (43%), Gaps = 39/271 (14%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVR 563
           ++E LG G  GTVYK +  + +   +AVK +   +  + +K+  +E+  + +     ++ 
Sbjct: 5   YQEILGHGNGGTVYKAYH-LLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIG 63

Query: 564 LLGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
             G     +NR+ +  EFM  G++  +      P   L   IA+ +  GL YL      +
Sbjct: 64  FYGAFFV-ENRISICTEFMDGGSLDVY---RKIPEHVL-GRIAVAVVKGLTYLWS---LK 115

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           I+H D+KP N+L++     ++ DFG++  L    S   T + GT  Y+APE        +
Sbjct: 116 ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLV--NSIAKTYV-GTNAYMAPERISGEQYGI 172

Query: 683 KVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQE--------RTLEALVEN 734
             DV+S G+  +E+                  L  + Y + Q+        + L+ +V+ 
Sbjct: 173 HSDVWSLGISFMEL-----------------ALGRFPYPQIQKNQGSLMPLQLLQCIVDE 215

Query: 735 DLEAMNNVTMLHRFVMVAFWCIQEDPSHRPT 765
           D   +       +FV     C+++ P  RP 
Sbjct: 216 DPPVLPVGQFSEKFVHFITQCMRKQPKERPA 246

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 58.1 bits (140), Expect = 8e-09
 Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 35/226 (15%)

Query: 495 YKELVEVTRGFKEE---------LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE 545
           Y+++V   R  + +         +GRGAFG V    V   SS  V   KL S F+  ++ 
Sbjct: 28  YEKIVRKIRKLQMKAEDYDVVKVIGRGAFGEVQ--LVRHKSSQKVYAMKLLSKFEMIKRS 85

Query: 546 ----FKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFG-DSKPNW-K 599
               F  E + +   +   +V+L     + +   +V E+M  G + + +   D    W K
Sbjct: 86  DSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAK 145

Query: 600 LRT-EIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS- 657
             T E+ + +      +H      +IH D+KP N+LLD H + +++DFG    + +D++ 
Sbjct: 146 FYTAEVVLALDA----IHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTC--MKMDETG 196

Query: 658 --HTNTAIRGTKGYVAPEWFRNMP----ITVKVDVYSYGVLLLEII 697
               +TA+ GT  Y++PE  ++         + D +S GV L E++
Sbjct: 197 MVRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEML 241

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 57.3 bits (138), Expect = 1e-08
 Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 12/197 (6%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNS---VFQDSEKEFKAEVNGIGQTHHKNL 561
           F   LG G+FG V            VA+K+      + Q       +E   +   +H   
Sbjct: 34  FIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFC 93

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           V L G   +     LV EF+  G   +FL    + N +   ++    A  +  + E   +
Sbjct: 94  VNLYGSFKDESYLYLVLEFVIGGEFFTFL----RRNKRFPNDVGCFYAAQIVLIFEYLQS 149

Query: 622 -QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPI 680
             I++ D+KP+N+LLD     +++DFG AK++    + T T + GT  Y+APE   N+  
Sbjct: 150 LNIVYRDLKPENLLLDKDGFIKMTDFGFAKVV---DTRTYT-LCGTPEYIAPEILLNVGH 205

Query: 681 TVKVDVYSYGVLLLEII 697
               D ++ G+ + EI+
Sbjct: 206 GKAADWWTLGIFIYEIL 222

Length = 340

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 57.3 bits (138), Expect = 1e-08
 Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 4/93 (4%)

Query: 605 AMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR 664
           A  IA  L YLH      I++ D+KP+NILLD   +  ++DFGL K   ++ + T +   
Sbjct: 102 AAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCK-ENIEHNGTTSTFC 157

Query: 665 GTKGYVAPEWFRNMPITVKVDVYSYGVLLLEII 697
           GT  Y+APE     P    VD +  G +L E++
Sbjct: 158 GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEML 190

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 56.6 bits (136), Expect = 1e-08
 Identities = 62/286 (21%), Positives = 115/286 (40%), Gaps = 50/286 (17%)

Query: 506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA----EVNGIGQTHHKNL 561
           ++++GRG F  VY+    +     VA+KK+  +F   + + +A    E++ + Q +H N+
Sbjct: 7   EKKIGRGQFSEVYRATCLLDGVP-VALKKVQ-IFDLMDAKARADCIKEIDLLKQLNHPNV 64

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFL--------FGDSKPNWKLRTEIAMGIAGGLF 613
           ++      E     +V E    G ++  +            K  WK   ++       L 
Sbjct: 65  IKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLC----SALE 120

Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE 673
           ++H     +++H DIKP N+ +      ++ D GL +  +   +  ++ + GT  Y++PE
Sbjct: 121 HMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSPE 176

Query: 674 WFRNMPITVKVDVYSYGVLLLEIICL-------RRNIDNEISKVDKAILTDWAYDRYQER 726
                    K D++S G LL E+  L       + N+ +   K+++        D Y E 
Sbjct: 177 RIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEE 236

Query: 727 TLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM 772
            L  LV                      CI  DP  RP +  V  +
Sbjct: 237 -LRQLVN--------------------MCINPDPEKRPDITYVYDV 261

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 56.6 bits (136), Expect = 1e-08
 Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 11/117 (9%)

Query: 605 AMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR 664
           A  I  GL ++H      +++ D+KP NILLD+H + RISD GLA   +  + H +    
Sbjct: 103 ATEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 156

Query: 665 GTKGYVAPEWF-RNMPITVKVDVYSYGVLLLEII----CLRRNIDNEISKVDKAILT 716
           GT GY+APE   +        D +S G +L +++      R++   +  ++D+  LT
Sbjct: 157 GTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT 213

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 57.0 bits (138), Expect = 1e-08
 Identities = 54/218 (24%), Positives = 94/218 (43%), Gaps = 56/218 (25%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ---DSEKEFKAEVNGIGQTHHKNLVRLL 565
           +GRGA+G V     N  ++  VA+KK+ + F    D+++  + E+  +    H+N++ + 
Sbjct: 13  IGRGAYGIVCSA-KNSETNEKVAIKKIANAFDNRIDAKRTLR-EIKLLRHLDHENVIAIK 70

Query: 566 GYCDEGQNR-----LLVYEFM---------SNGTVAS-----FLFGDSKPNWKLRTEIAM 606
                          +VYE M         S+ T++      FL+        LR     
Sbjct: 71  DIMPPPHREAFNDVYIVYELMDTDLHQIIRSSQTLSDDHCQYFLYQ------LLR----- 119

Query: 607 GIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGT 666
               GL Y+H      ++H D+KP N+LL+ + + +I DFGLA+        T+      
Sbjct: 120 ----GLKYIHS---ANVLHRDLKPSNLLLNANCDLKICDFGLART-------TSEKGDFM 165

Query: 667 KGYVAPEWFRNMPI-------TVKVDVYSYGVLLLEII 697
             YV   W+R   +       T  +DV+S G +  E++
Sbjct: 166 TEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELL 203

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 56.6 bits (136), Expect = 2e-08
 Identities = 56/208 (26%), Positives = 90/208 (43%), Gaps = 39/208 (18%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD---SEKEFKAEVNGIGQTHHKNLVRLL 565
           +G GA+G+V   + +      VAVKKL+  FQ    + + ++ E+  +    H+N++ LL
Sbjct: 23  VGSGAYGSVCSAY-DTRLRQKVAVKKLSRPFQSLIHARRTYR-ELRLLKHMKHENVIGLL 80

Query: 566 GY------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLH 616
                    +      LV   M    N  V      D    +     +   +  GL Y+H
Sbjct: 81  DVFTPATSIENFNEVYLVTNLMGADLNNIVKCQKLSDEHVQF-----LIYQLLRGLKYIH 135

Query: 617 EECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR 676
                 IIH D+KP N+ +++    RI DFGLA+    D   T        GYVA  W+R
Sbjct: 136 S---AGIIHRDLKPSNVAVNEDCELRILDFGLAR--QADDEMT--------GYVATRWYR 182

Query: 677 NMPITVK-------VDVYSYGVLLLEII 697
              I +        VD++S G ++ E++
Sbjct: 183 APEIMLNWMHYNQTVDIWSVGCIMAELL 210

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 55.3 bits (133), Expect = 4e-08
 Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 16/137 (11%)

Query: 611 GLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV 670
           GL ++H      +++ D+KP NILLD+H + RISD GLA   +  + H +    GT GY+
Sbjct: 109 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYM 162

Query: 671 APEWF-RNMPITVKVDVYSYGVLLLEII----CLRRNIDNEISKVDKAILT---DWAYDR 722
           APE   + +      D +S G +L +++      R++   +  ++D+  LT   +     
Sbjct: 163 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF 222

Query: 723 YQERT--LEALVENDLE 737
             E    LE L++ D+ 
Sbjct: 223 SPELRSLLEGLLQRDVN 239

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 54.8 bits (132), Expect = 4e-08
 Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 39/216 (18%)

Query: 507 EELGRGAFGTVYKG-------FVNMGSSNHVAV--KKLNSVFQDSEKEFKAEVNGIGQTH 557
           E LG+G F  +YKG          +G    V+V  K L S  +DS   F    + + Q  
Sbjct: 1   EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSL-AFFETASLMSQLS 59

Query: 558 HKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPN-----WKLRTEIAMGIAGGL 612
           HK+LV+L G C   +N ++V E++  G +  FL    + N     WKL  ++A  +A  L
Sbjct: 60  HKHLVKLYGVCVRDEN-IMVEEYVKFGPLDVFL--HREKNNVSLHWKL--DVAKQLASAL 114

Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYN-------ARISDFGLAK-LLTLDQSHTNTAIR 664
            YL ++   +++H ++  +NIL+  +          ++SD G+   +L+ ++        
Sbjct: 115 HYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREERVERIP-- 169

Query: 665 GTKGYVAPEWFRNMP--ITVKVDVYSYGVLLLEIIC 698
               ++APE  RN    +T+  D +S+G  LLEI  
Sbjct: 170 ----WIAPECIRNGQASLTIAADKWSFGTTLLEICS 201

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 55.4 bits (133), Expect = 4e-08
 Identities = 63/260 (24%), Positives = 114/260 (43%), Gaps = 22/260 (8%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHV---AVKKLNSVFQDSEKEF-KAEVNGIGQTHHKNLVRL 564
           +GRG++  V    V +  ++ +    V K   V  D + ++ + E +   Q      +  
Sbjct: 3   IGRGSYAKVL--LVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVG 60

Query: 565 LGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           L  C +  +RL LV E+++ G +   +    K   +     A  I   L +LHE     I
Sbjct: 61  LHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHER---GI 117

Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVK 683
           I+ D+K  N+LLD   + +++D+G+ K   L    T +   GT  Y+APE  R       
Sbjct: 118 IYRDLKLDNVLLDADGHIKLTDYGMCKE-GLGPGDTTSTFCGTPNYIAPEILRGEEYGFS 176

Query: 684 VDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVT 743
           VD ++ GVL+ E++  R   D         I+TD      ++   + ++E  +     ++
Sbjct: 177 VDWWALGVLMFEMMAGRSPFD---------IITDNPDMNTEDYLFQVILEKPIRIPRFLS 227

Query: 744 MLHRFVMVAFWCIQEDPSHR 763
           +    V+  F  + +DP  R
Sbjct: 228 VKASHVLKGF--LNKDPKER 245

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 55.6 bits (134), Expect = 4e-08
 Identities = 59/188 (31%), Positives = 89/188 (47%), Gaps = 36/188 (19%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKLN--SVFQDSEKE-FKAE----VNG----IGQT 556
           +GRGAFG V    V M ++  V A+K LN   + + +E   F+ E    VNG    I   
Sbjct: 9   IGRGAFGEV--AVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNL 66

Query: 557 HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFL--FGDSKPNWKLR---TEIAMGIAGG 611
           H+        + DE  N  LV ++   G + + L  F D  P    R    E+ + I   
Sbjct: 67  HY-------AFQDE-NNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDS- 117

Query: 612 LFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFG-LAKLLTLDQSHTNTAIRGTKGYV 670
              +H+      +H DIKP N+LLD + + R++DFG   +LL      +N A+ GT  Y+
Sbjct: 118 ---VHQ---LGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAV-GTPDYI 170

Query: 671 APEWFRNM 678
           +PE  + M
Sbjct: 171 SPEILQAM 178

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 55.1 bits (132), Expect = 5e-08
 Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 23/201 (11%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE-KEFKA--EVNGIGQTHHKNLVR 563
           E+LG G++ TVYKG   + +   VA+K +    Q+ E   F A  E + +    H N+V 
Sbjct: 11  EKLGEGSYATVYKGKSKV-NGKLVALKVIR--LQEEEGTPFTAIREASLLKGLKHANIVL 67

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP------NWKLRTEIAMGIAGGLFYLHE 617
           L       +   LV+E++         + D  P      N KL       +  GL Y+H+
Sbjct: 68  LHDIIHTKETLTLVFEYVHTDLCQ---YMDKHPGGLHPENVKL---FLFQLLRGLSYIHQ 121

Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE-WFR 676
                I+H D+KPQN+L+ D    +++DFGLA+  ++  SHT +    T  Y  P+    
Sbjct: 122 R---YILHRDLKPQNLLISDTGELKLADFGLARAKSV-PSHTYSNEVVTLWYRPPDVLLG 177

Query: 677 NMPITVKVDVYSYGVLLLEII 697
           +   +  +D++  G + +E+I
Sbjct: 178 STEYSTCLDMWGVGCIFVEMI 198

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 55.1 bits (133), Expect = 6e-08
 Identities = 52/207 (25%), Positives = 87/207 (42%), Gaps = 35/207 (16%)

Query: 507 EELGRGAFGTVY-------KGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHK 559
            ++G+G +G V+          V +       + KLN V     +    E + +  T  +
Sbjct: 7   TQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEV-----RHVLTERDILTTTKSE 61

Query: 560 NLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEEC 619
            LV+LL    + +   L  E++  G   + L         L  + A       FY+ E  
Sbjct: 62  WLVKLLYAFQDDEYLYLAMEYVPGGDFRTLL----NNLGVLSEDHAR------FYMAEMF 111

Query: 620 CT-------QIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLDQSHTNTAIRGTKGYVA 671
                      IH D+KP+N L+D   + +++DFGL+K ++T   S     + G+  Y+A
Sbjct: 112 EAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANS-----VVGSPDYMA 166

Query: 672 PEWFRNMPITVKVDVYSYGVLLLEIIC 698
           PE  R       VD +S G +L E +C
Sbjct: 167 PEVLRGKGYDFTVDYWSLGCMLYEFLC 193

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 54.8 bits (132), Expect = 6e-08
 Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 20/200 (10%)

Query: 509 LGRGAFGTVYKGFVNMGSSNH--VAVKKLNSVF----QDSEKEFKAEVNGIGQTHHKNLV 562
           LG+G +G V++     G+      A+K L        Q      KAE N +    H  +V
Sbjct: 4   LGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIV 63

Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFL-----FGDSKPNWKLRTEIAMGIAGGLFYLHE 617
            L+     G    L+ E++S G +   L     F +    + L +EI++ +     +LH+
Sbjct: 64  DLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYL-SEISLALE----HLHQ 118

Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
           +    II+ D+KP+NILLD   + +++DFGL K    + + T+T   GT  Y+APE    
Sbjct: 119 Q---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTFC-GTIEYMAPEILMR 174

Query: 678 MPITVKVDVYSYGVLLLEII 697
                 VD +S G L+ +++
Sbjct: 175 SGHGKAVDWWSLGALMYDML 194

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 55.0 bits (133), Expect = 6e-08
 Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 14/94 (14%)

Query: 611 GLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV 670
           GL Y+H      ++H D+KP N+LL+ + + +I DFGLA++   +  HT         YV
Sbjct: 118 GLKYIHS---ANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHT----GFLTEYV 170

Query: 671 APEWFRNMPI-------TVKVDVYSYGVLLLEII 697
           A  W+R   I       T  +D++S G +L E++
Sbjct: 171 ATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEML 204

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 55.0 bits (132), Expect = 7e-08
 Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 29/206 (14%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKLN--SVFQDSEKE-FKAE----VNGIGQTHHKN 560
           +GRGAFG V    V M  +  + A+K LN   + + +E   F+ E    VNG  Q     
Sbjct: 9   IGRGAFGEV--AVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQ----- 61

Query: 561 LVRLLGYCDEGQNRL-LVYEFMSNGTVASFL--FGDSKPNWKLRTEIA-MGIAGGLFYLH 616
            +  L Y  + +N L LV ++   G + + L  F D  P    R  IA M +A  +  +H
Sbjct: 62  WITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLA--IHSIH 119

Query: 617 EECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR 676
           +      +H DIKP N+LLD + + R++DFG    +  D +  ++   GT  Y++PE  +
Sbjct: 120 QL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQ 176

Query: 677 NMPITV-----KVDVYSYGVLLLEII 697
            M   +     + D +S GV + E++
Sbjct: 177 AMEDGMGKYGPECDWWSLGVCMYEML 202

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 55.0 bits (132), Expect = 7e-08
 Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 31/173 (17%)

Query: 608 IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT-AIRGT 666
           +A G+ +L    C   IH D+  +NILL ++   +I DFGLA+ +  D  +    + R  
Sbjct: 183 VARGMEFLASRKC---IHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLP 239

Query: 667 KGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRN------IDNEISKVDKAILTDWAY 720
             ++APE   +   T + DV+S+GVLL EI  L  +      I+ E  +           
Sbjct: 240 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQ----------- 288

Query: 721 DRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQML 773
            R ++ T        + A  N T     +M+A W  Q DP  RPT   + ++L
Sbjct: 289 -RLKDGT-------RMRAPENATPEIYRIMLACW--QGDPKERPTFSALVEIL 331

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 54.7 bits (131), Expect = 7e-08
 Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 12/203 (5%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNS---VFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG V        S  + A+K L     + +D       E   +  T H  L  L 
Sbjct: 3   LGKGTFGKVIL-VREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSL- 60

Query: 566 GYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEI-AMGIAGGLFYLHEECCTQI 623
            Y  + ++RL  V E+++ G +  F     +   + RT      I   L YLH     +I
Sbjct: 61  KYSFQTKDRLCFVMEYVNGGELF-FHLSRERVFSEDRTRFYGAEIVSALDYLHS---GKI 116

Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVK 683
           ++ D+K +N++LD   + +I+DFGL K    D +   T   GT  Y+APE   +      
Sbjct: 117 VYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFC-GTPEYLAPEVLEDNDYGRA 175

Query: 684 VDVYSYGVLLLEIICLRRNIDNE 706
           VD +  GV++ E++C R    N+
Sbjct: 176 VDWWGLGVVMYEMMCGRLPFYNQ 198

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 54.2 bits (130), Expect = 7e-08
 Identities = 71/288 (24%), Positives = 119/288 (41%), Gaps = 56/288 (19%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNH-----------VAVKKLNSVFQDSEKEFKAEVNGIGQ 555
           E LGRG    +Y G +N    +            V +K L+   +D    F    + + Q
Sbjct: 1   EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQ 60

Query: 556 THHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP---NWKLRTEIAMGIAGGL 612
             HK++V L G C      ++V EF+  G +  F+   S      WK +  +A  +A  L
Sbjct: 61  VSHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFK--VAKQLASAL 118

Query: 613 FYLHEECCTQIIHCDIKPQNILL-----DDHYNA--RISDFGLAKLLTLDQSHTNTAIRG 665
            YL ++    ++H ++  +NILL     D       ++SD G+  +  L +      I  
Sbjct: 119 SYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIP-ITVLSRQECVERIP- 173

Query: 666 TKGYVAPEWFRNMP-ITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQ 724
              ++APE   +   +++  D +S+G  L E IC     + EI   DK +         +
Sbjct: 174 ---WIAPECVEDSKNLSIAADKWSFGTTLWE-ICY----NGEIPLKDKTLAE-------K 218

Query: 725 ERTLEA---LVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKV 769
           ER  E    LV    + + ++ M H        C+  DP+ RP  R +
Sbjct: 219 ERFYEGQCMLVTPSCKELADL-MTH--------CMNYDPNQRPFFRAI 257

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 54.7 bits (131), Expect = 7e-08
 Identities = 51/201 (25%), Positives = 94/201 (46%), Gaps = 11/201 (5%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKLNSVFQDSEKEF---KAEVNGIGQTHHKNLVRL 564
           +GRG++  V    V +  +  + A+K +     + +++    + E +   Q  +   +  
Sbjct: 3   IGRGSYAKVL--LVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 60

Query: 565 LGYCDEGQNRLL-VYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           L  C + ++RL  V E+++ G +   +    K   +     +  I+  L YLHE     I
Sbjct: 61  LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GI 117

Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVK 683
           I+ D+K  N+LLD   + +++D+G+ K   L    T +   GT  Y+APE  R       
Sbjct: 118 IYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSTFCGTPNYIAPEILRGEDYGFS 176

Query: 684 VDVYSYGVLLLEIICLRRNID 704
           VD ++ GVL+ E++  R   D
Sbjct: 177 VDWWALGVLMFEMMAGRSPFD 197

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 54.5 bits (131), Expect = 8e-08
 Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 15/196 (7%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVK--KLNSVFQDSEKE---FKAEVNGIGQTHHKNLVR 563
           LG+G+FG V    +  G+    A+K  K + + QD + +    +  +  +   H    + 
Sbjct: 3   LGKGSFGKVMLAELK-GTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKH--PFLT 59

Query: 564 LLGYCDEGQNRLL-VYEFMSNGTVASFLFGDSKPNWKLRTEI-AMGIAGGLFYLHEECCT 621
            L  C + ++RL  V E++ NG    F    S+   + R+   A  +   L +LH     
Sbjct: 60  ALHCCFQTKDRLFFVMEYV-NGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRH--- 115

Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT 681
            +I+ D+K  NILLD   + +++DFG+ K   +    T T   GT  Y+APE  + +   
Sbjct: 116 GVIYRDLKLDNILLDAEGHCKLADFGMCKE-GILNGVTTTTFCGTPDYIAPEILQELEYG 174

Query: 682 VKVDVYSYGVLLLEII 697
             VD ++ GVL+ E++
Sbjct: 175 PSVDWWALGVLMYEMM 190

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 54.5 bits (131), Expect = 1e-07
 Identities = 42/159 (26%), Positives = 66/159 (41%), Gaps = 15/159 (9%)

Query: 549 EVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM-- 606
           E++ +    H+ ++ L+      + +  V   M       F + D      L   I +  
Sbjct: 136 EIDILKTISHRAIINLI---HAYRWKSTVCMVMPKYKCDLFTYVDRSGPLPLEQAITIQR 192

Query: 607 GIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT----A 662
            +   L YLH      IIH D+K +NI LD+  NA + DFG A  L    +H +T     
Sbjct: 193 RLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLD---AHPDTPQCYG 246

Query: 663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRR 701
             GT    +PE     P   K D++S G++L E+     
Sbjct: 247 WSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNV 285

Length = 392

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 54.3 bits (130), Expect = 1e-07
 Identities = 51/196 (26%), Positives = 84/196 (42%), Gaps = 9/196 (4%)

Query: 509 LGRGAFGTVYKGFVNMGSSNH---VAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG V    V   ++     + + K   +    E       N + Q      +  L
Sbjct: 3   LGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 60

Query: 566 GYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
            Y  +  +RL  V E+ + G +   L  +   +          I   L YLH E    ++
Sbjct: 61  KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE--KNVV 118

Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKV 684
           + D+K +N++LD   + +I+DFGL K    D +   T   GT  Y+APE   +      V
Sbjct: 119 YRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC-GTPEYLAPEVLEDNDYGRAV 177

Query: 685 DVYSYGVLLLEIICLR 700
           D +  GV++ E++C R
Sbjct: 178 DWWGLGVVMYEMMCGR 193

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 54.3 bits (131), Expect = 1e-07
 Identities = 61/243 (25%), Positives = 94/243 (38%), Gaps = 72/243 (29%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKLNS---VFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           +GRGAFG V    V    + H+ A+KKL     + ++     +AE + + +  +  +V+L
Sbjct: 9   IGRGAFGEVR--LVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKL 66

Query: 565 LGYC---DEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
             Y    DE     L+ E++  G + + L    K +     E         FY+  E   
Sbjct: 67  --YYSFQDE-NYLYLIMEYLPGGDMMTLLM---KKD-TFTEEET------RFYI-AETIL 112

Query: 622 QI--------IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR--------- 664
            I        IH DIKP N+LLD   + ++SDFGL     L +SH     R         
Sbjct: 113 AIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCT--GLKKSHRTEFYRILSHALPSN 170

Query: 665 ------------------------------GTKGYVAPEWFRNMPITVKVDVYSYGVLLL 694
                                         GT  Y+APE F       + D +S GV++ 
Sbjct: 171 FLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMY 230

Query: 695 EII 697
           E++
Sbjct: 231 EML 233

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 53.4 bits (128), Expect = 1e-07
 Identities = 62/282 (21%), Positives = 119/282 (42%), Gaps = 46/282 (16%)

Query: 506 KEELGRGAFGTVY-------KGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHH 558
           ++ LG+G+FGTVY            +     + V +LN    +   +   E   + +  H
Sbjct: 5   QQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNP---NETVQANQEAQLLSKLDH 61

Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM-----GIAGGLF 613
             +V+      E     ++ E+   G        + K   K  +E  +      +  G+ 
Sbjct: 62  PAIVKFHASFLERDAFCIITEY-CEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVH 120

Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE 673
           Y+H+    +I+H D+K +NI L ++   +I DFG+++LL +      T   GT  Y++PE
Sbjct: 121 YMHQR---RILHRDLKAKNIFLKNNL-LKIGDFGVSRLL-MGSCDLATTFTGTPYYMSPE 175

Query: 674 WFRNMPITVKVDVYSYGVLLLEIICLRRNID--NEISKVDKAILTDWAY--DRYQERTLE 729
             ++     K D++S G +L E+ CL    +  N +S V + +        + Y  R L 
Sbjct: 176 ALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPETY-SRQLN 234

Query: 730 ALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ 771
           +++++ L                     +DPS RP+  ++ +
Sbjct: 235 SIMQSMLN--------------------KDPSLRPSAAEILR 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 53.3 bits (128), Expect = 2e-07
 Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 2/77 (2%)

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPI-- 680
           II+ DIK +NILLD   +  ++DFGL+K    ++     +  GT  Y+APE  R      
Sbjct: 126 IIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGH 185

Query: 681 TVKVDVYSYGVLLLEII 697
              VD +S GVL  E++
Sbjct: 186 DKAVDWWSLGVLTFELL 202

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 53.4 bits (129), Expect = 2e-07
 Identities = 43/179 (24%), Positives = 66/179 (36%), Gaps = 63/179 (35%)

Query: 510 GRGAFGTVYKGFVNMGSSNHV-AVKKLNSVFQDSEKEFKAEVNGIGQT-----------H 557
           GRG +G VYK     G      A+KK         K  K +  GI Q+            
Sbjct: 9   GRGTYGRVYKAKRKNGKDGKEYAIKKF--------KGDKEQYTGISQSACREIALLRELK 60

Query: 558 HKNLVRLLGYCDEGQNRL--LVYEF-------------------MSNGTVASFLFGDSKP 596
           H+N+V L+    E  ++   L++++                   +    V S L+     
Sbjct: 61  HENVVSLVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQ---- 116

Query: 597 NWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILL----DDHYNARISDFGLAKL 651
                      I  G+ YLH      ++H D+KP NIL+     +    +I D GLA+L
Sbjct: 117 -----------ILNGVHYLHS---NWVLHRDLKPANILVMGEGPERGVVKIGDLGLARL 161

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 53.7 bits (129), Expect = 2e-07
 Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 4/93 (4%)

Query: 608 IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT-NTAIRGT 666
           +A G+ +L    C   IH D+  +NILL ++   +I DFGLA+ +  D  +      R  
Sbjct: 182 VARGMEFLASRKC---IHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLP 238

Query: 667 KGYVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
             ++APE   +   T + DV+S+GVLL EI  L
Sbjct: 239 LKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSL 271

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 53.5 bits (128), Expect = 2e-07
 Identities = 50/208 (24%), Positives = 96/208 (46%), Gaps = 39/208 (18%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLVRLL 565
           E+LG G + TV+KG   + + N VA+K++    ++        EV+ +    H N+V L 
Sbjct: 12  EKLGEGTYATVFKGRSKL-TENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLH 70

Query: 566 GYCDEGQNRLLVYEF---------------MSNGTVASFLFGDSKPNWKLRTEIAMGIAG 610
                 ++  LV+E+               MS   V  FL+                I  
Sbjct: 71  DIVHTDKSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQ---------------ILR 115

Query: 611 GLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGY 669
           GL Y H     +++H D+KPQN+L+++    +++DFGLA+  ++  ++++N  +  T  Y
Sbjct: 116 GLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVV--TLWY 170

Query: 670 VAPE-WFRNMPITVKVDVYSYGVLLLEI 696
             P+    +   + ++D++  G +  E+
Sbjct: 171 RPPDVLLGSSEYSTQIDMWGVGCIFFEM 198

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 53.5 bits (128), Expect = 2e-07
 Identities = 50/173 (28%), Positives = 76/173 (43%), Gaps = 31/173 (17%)

Query: 608 IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA-IRGT 666
           +A G+ +L    C   IH D+  +NILL ++   +I DFGLA+ +  D  +      R  
Sbjct: 188 VAKGMEFLASRKC---IHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLP 244

Query: 667 KGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRN------IDNEISKVDKAILTDWAY 720
             ++APE   +   T++ DV+S+GVLL EI  L  +      ID E  +           
Sbjct: 245 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR----------- 293

Query: 721 DRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQML 773
            R +E T     +     M   TML         C   +PS RPT  ++ + L
Sbjct: 294 -RLKEGTRMRAPDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVEHL 336

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 53.1 bits (128), Expect = 2e-07
 Identities = 61/205 (29%), Positives = 88/205 (42%), Gaps = 32/205 (15%)

Query: 509 LGRGAFGTV----YKGFVNMGSSNHVAVKKLNSVF---QD------SEKEFKAEVNGIGQ 555
           LGRG FG V    YK      +    A+K L       +D       EK      N    
Sbjct: 7   LGRGHFGKVLLAEYKK-----TGELYAIKALKKGDIIARDEVESLMCEKRIFETANSER- 60

Query: 556 THHKNLVRLLGYCDEGQNRL-LVYEFMSNGTVASFLFGD--SKPNWKLRTEIAMGIAGGL 612
             H  LV L   C + ++ +  V E+ + G +   +  D  S+P        A  +  GL
Sbjct: 61  --HPFLVNLFA-CFQTEDHVCFVMEYAAGGDLMMHIHTDVFSEPRAVF---YAACVVLGL 114

Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAP 672
            YLHE    +I++ D+K  N+LLD     +I+DFGL K        T+T   GT  ++AP
Sbjct: 115 QYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTSTFC-GTPEFLAP 170

Query: 673 EWFRNMPITVKVDVYSYGVLLLEII 697
           E       T  VD +  GVL+ E++
Sbjct: 171 EVLTETSYTRAVDWWGLGVLIYEML 195

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 53.3 bits (128), Expect = 2e-07
 Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 26/208 (12%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKLN-SVFQDSEK--EFKAEVNGIGQTHHKNLVRL 564
           +GRG FG V    V   ++  + A+K +  SV    E    F+ E + +  ++   + +L
Sbjct: 9   VGRGHFGEVQ--VVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQL 66

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFL------FGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
                +  N  LV E+   G + S L      F +    + L  E+ + I      +H+ 
Sbjct: 67  QYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYL-AELVLAIHS----VHQ- 120

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
                +H DIKP+N+L+D   + +++DFG A  LT ++   +    GT  Y+APE    M
Sbjct: 121 --MGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTM 178

Query: 679 ------PITVKVDVYSYGVLLLEIICLR 700
                    V+ D +S GV+  E+I  R
Sbjct: 179 NGDGKGTYGVECDWWSLGVIAYEMIYGR 206

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 52.7 bits (126), Expect = 2e-07
 Identities = 61/273 (22%), Positives = 118/273 (43%), Gaps = 35/273 (12%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           + +G G +G VYK   N+ +    AVK +     D     + E+  + +  H N+V   G
Sbjct: 15  QRVGSGTYGDVYKA-RNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFG 73

Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTE-IAMGIAGGLFYLHEECCTQIIH 625
                +   +  E+   G++   ++  + P  +L+   +      GL YLH +     +H
Sbjct: 74  SYLSREKLWICMEYCGGGSLQD-IYHVTGPLSELQIAYVCRETLQGLAYLHSK---GKMH 129

Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF---RNMPITV 682
            DIK  NILL D+ + +++DFG+A  +T   +   + I GT  ++APE     +N     
Sbjct: 130 RDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFI-GTPYWMAPEVAAVEKNGGYNQ 188

Query: 683 KVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL------ 736
             D+++ G+  +E+                A L    +D +  R L  + +++       
Sbjct: 189 LCDIWAVGITAIEL----------------AELQPPMFDLHPMRALFLMSKSNFQPPKLK 232

Query: 737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKV 769
           +     +  H FV ++   + ++P  RPT  ++
Sbjct: 233 DKTKWSSTFHNFVKIS---LTKNPKKRPTAERL 262

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 52.7 bits (126), Expect = 3e-07
 Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 16/195 (8%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE--KEFKA----EVNGIGQTHHKNLV 562
           +G GA+G V K   +  +   VA+KK    F+DSE  +E K     E+  +     +N+V
Sbjct: 9   VGEGAYGVVLK-CRHKETKEIVAIKK----FKDSEENEEVKETTLRELKMLRTLKQENIV 63

Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFL-FGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
            L           LV+E++    +       +  P  K+R+ I   I   + + H+    
Sbjct: 64  ELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKA-IHWCHK---N 119

Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT 681
            I+H DIKP+N+L+  +   ++ DFG A+ L+   +   T    T+ Y +PE     P  
Sbjct: 120 DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYG 179

Query: 682 VKVDVYSYGVLLLEI 696
             VD++S G +L E+
Sbjct: 180 KAVDMWSVGCILGEL 194

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 52.8 bits (126), Expect = 3e-07
 Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 21/202 (10%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKLN--SVFQDSEKE-FKAEVNGIGQTHHKNLVRL 564
           +GRGAFG V    V + +++ V A+K LN   + + +E   F+ E + +    ++ +  L
Sbjct: 9   IGRGAFGEV--AVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTL 66

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFL--FGDSKPNWKLRTEIA-MGIA-GGLFYLHEECC 620
                +  N  LV ++   G + + L  F D  P    R  +A M IA   +  LH    
Sbjct: 67  HYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLH---- 122

Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP- 679
              +H DIKP NIL+D + + R++DFG    L  D +  ++   GT  Y++PE  + M  
Sbjct: 123 --YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMED 180

Query: 680 ----ITVKVDVYSYGVLLLEII 697
                  + D +S GV + E++
Sbjct: 181 GKGKYGPECDWWSLGVCMYEML 202

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 52.7 bits (126), Expect = 3e-07
 Identities = 54/206 (26%), Positives = 103/206 (50%), Gaps = 27/206 (13%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA------EVNGIGQTHHKN 560
           ++LG G + TVYKG   + + N VA+K++       E E  A      EV+ +    H N
Sbjct: 12  DKLGEGTYATVYKGRSKL-TDNLVALKEIR-----LEHEEGAPCTAIREVSLLKDLKHAN 65

Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFL--FGDS--KPNWKLRTEIAMGIAGGLFYLH 616
           +V L       ++  LV+E++ +  +  +L   G+S    N KL       +  GL Y H
Sbjct: 66  IVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNSINMHNVKL---FLFQLLRGLNYCH 121

Query: 617 EECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPE-W 674
                +++H D+KPQN+L+++    +++DFGLA+  ++  ++++N  +  T  Y  P+  
Sbjct: 122 RR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVV--TLWYRPPDIL 176

Query: 675 FRNMPITVKVDVYSYGVLLLEIICLR 700
             +   + ++D++  G +  E+   R
Sbjct: 177 LGSTDYSTQIDMWGVGCIFYEMSTGR 202

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|238531 cd01098, PAN_AP_plant, Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins

 Score = 48.2 bits (115), Expect = 3e-07
 Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 8/87 (9%)

Query: 343 LGCEEDGKKSGEDLYYIEELRNTDWPTSDYEQISPYGKDECVSSCLKDCQCSAAVLRDD- 401
           L C  DG     D +   +L +   P +    I+    +EC  +CL +C C+A    +  
Sbjct: 3   LNCGGDG---STDGFL--KLPDVKLPDNAS-AITAISLEECREACLSNCSCTAYAYNNGS 56

Query: 402 -TCWKKKLPLSYGKTDRDETGTTFIKI 427
             C      L+  ++     GT ++++
Sbjct: 57  GGCLLWNGLLNNLRSLSSGGGTLYLRL 83

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization. Length = 84

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 52.9 bits (127), Expect = 3e-07
 Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 34/211 (16%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ---DSEKEFKAEVNGIGQTHHKNLVR 563
           E +G+G++G V    ++  +   VA+KK+N VF+   D+ +  + E+  +    H ++V 
Sbjct: 6   EVIGKGSYGVVCSA-IDTHTGEKVAIKKINDVFEHVSDATRILR-EIKLLRLLRHPDIVE 63

Query: 564 LLGYC-----DEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTE----IAMGIAGGLFY 614
           +          E ++  +V+E M      S L    K N  L  E        +   L Y
Sbjct: 64  IKHIMLPPSRREFKDIYVVFELME-----SDLHQVIKANDDLTPEHHQFFLYQLLRALKY 118

Query: 615 LHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEW 674
           +H      + H D+KP+NIL +     +I DFGLA++   D   T TAI  T  YVA  W
Sbjct: 119 IHT---ANVFHRDLKPKNILANADCKLKICDFGLARVAFND---TPTAIFWTD-YVATRW 171

Query: 675 FRNMPI--------TVKVDVYSYGVLLLEII 697
           +R   +        T  +D++S G +  E++
Sbjct: 172 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVL 202

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 52.5 bits (126), Expect = 3e-07
 Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 4/93 (4%)

Query: 608 IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK 667
           I   L YLH      +++ D+K +N++LD   + +I+DFGL K    D +   T   GT 
Sbjct: 104 IVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC-GTP 159

Query: 668 GYVAPEWFRNMPITVKVDVYSYGVLLLEIICLR 700
            Y+APE   +      VD +  GV++ E++C R
Sbjct: 160 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 192

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 52.6 bits (126), Expect = 4e-07
 Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 5/90 (5%)

Query: 608 IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK 667
           I  GL YLH +   +IIH D+K +NI ++D     I D G A+   +  +    A  GT 
Sbjct: 166 ILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLA--GTV 220

Query: 668 GYVAPEWFRNMPITVKVDVYSYGVLLLEII 697
              APE         K D++S G++L E++
Sbjct: 221 ETNAPEVLARDKYNSKADIWSAGIVLFEML 250

Length = 357

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 52.5 bits (126), Expect = 5e-07
 Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 26/203 (12%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ---DSEKEFKAEVNGIGQTHHKN---LV 562
           +GRGAFG V    V   SS  V   KL S F+    S+  F  E   I    H N   +V
Sbjct: 51  IGRGAFGEVQ--LVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDI--MAHANSEWIV 106

Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFG-DSKPNW-KLRT-EIAMGIAGGLFYLHEEC 619
           +L     + +   +V E+M  G + + +   D    W +  T E+ + +      +H   
Sbjct: 107 QLHYAFQDDKYLYMVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDA----IHS-- 160

Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD-QSHTNTAIRGTKGYVAPEWFRNM 678
               IH D+KP N+LLD   + +++DFG    +  +     +TA+ GT  Y++PE  ++ 
Sbjct: 161 -MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAV-GTPDYISPEVLKSQ 218

Query: 679 PITV----KVDVYSYGVLLLEII 697
                   + D +S GV L E++
Sbjct: 219 GGDGYYGRECDWWSVGVFLYEML 241

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 51.6 bits (123), Expect = 5e-07
 Identities = 66/279 (23%), Positives = 120/279 (43%), Gaps = 43/279 (15%)

Query: 507 EELGRGAFGTVYKGF-VNMGSSNHVAVKKLNSVFQDSEKEF---KAEVNGIGQTHHKNLV 562
           + +G G +G VYK   VN G    + V KL     +  ++F   + E+  +    H N+V
Sbjct: 15  QRIGSGTYGDVYKARNVNTGELAAIKVIKL-----EPGEDFAVVQQEIIMMKDCKHSNIV 69

Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTE-IAMGIAGGLFYLHEECCT 621
              G         +  EF   G++   ++  + P  + +   ++     GL+YLH +   
Sbjct: 70  AYFGSYLRRDKLWICMEFCGGGSLQD-IYHVTGPLSESQIAYVSRETLQGLYYLHSK--- 125

Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF---RNM 678
             +H DIK  NILL D+ + +++DFG++  +T   +   + I GT  ++APE     R  
Sbjct: 126 GKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFI-GTPYWMAPEVAAVERKG 184

Query: 679 PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLE- 737
                 D+++ G+  +E+                A L    +D +  R L  + +++ + 
Sbjct: 185 GYNQLCDIWAVGITAIEL----------------AELQPPMFDLHPMRALFLMTKSNFQP 228

Query: 738 -----AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ 771
                 M      H FV +A   + ++P  RPT  K+ Q
Sbjct: 229 PKLKDKMKWSNSFHHFVKMA---LTKNPKKRPTAEKLLQ 264

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 51.9 bits (124), Expect = 6e-07
 Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 4/93 (4%)

Query: 608 IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK 667
           I   L YLH      +++ DIK +N++LD   + +I+DFGL K    D +   T   GT 
Sbjct: 104 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC-GTP 159

Query: 668 GYVAPEWFRNMPITVKVDVYSYGVLLLEIICLR 700
            Y+APE   +      VD +  GV++ E++C R
Sbjct: 160 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 192

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 51.4 bits (123), Expect = 8e-07
 Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 4/97 (4%)

Query: 608 IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK 667
           I+  L +LHE     II+ D+K  N+LLD   + +++D+G+ K   +    T +   GT 
Sbjct: 105 ISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKE-GIRPGDTTSTFCGTP 160

Query: 668 GYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNID 704
            Y+APE  R       VD ++ GVL+ E++  R   D
Sbjct: 161 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 197

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 51.0 bits (122), Expect = 9e-07
 Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 41/216 (18%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT---------- 556
           E++G G +G VYK   +  +   VA+KK      + ++E      GI  T          
Sbjct: 7   EKIGEGTYGKVYKA-RDKNTGKLVALKKTRL---EMDEE------GIPPTALREISLLQM 56

Query: 557 --HHKNLVRLLGY----CDEGQNRL-LVYEFMSNGTVASFLFGDSK-PNWKLRTEIAMG- 607
                 +VRLL         G+  L LV+E++ +  +  F+  + + P   L  +     
Sbjct: 57  LSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSF 115

Query: 608 ---IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNA-RISDFGLAKLLTLD-QSHTNTA 662
              +  G+ + H+     ++H D+KPQN+L+D      +I+D GL +  ++  +S+T+  
Sbjct: 116 MYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSYTHEI 172

Query: 663 IRGTKGYVAPE-WFRNMPITVKVDVYSYGVLLLEII 697
           +  T  Y APE    +   +  VD++S G +  E+ 
Sbjct: 173 V--TLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMS 206

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 50.8 bits (121), Expect = 1e-06
 Identities = 52/203 (25%), Positives = 100/203 (49%), Gaps = 21/203 (10%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA------EVNGIGQTHHKN 560
           ++LG G + TV+KG   + + N VA+K++       E E  A      EV+ +    H N
Sbjct: 11  DKLGEGTYATVFKGRSKL-TENLVALKEIRL-----EHEEGAPCTAIREVSLLKNLKHAN 64

Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM-GIAGGLFYLHEEC 619
           +V L       +   LV+E++ +  +  +L            +I M  +  GL Y H+  
Sbjct: 65  IVTLHDIIHTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKR- 122

Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPE-WFRN 677
             +I+H D+KPQN+L+++    +++DFGLA+  ++  ++++N  +  T  Y  P+    +
Sbjct: 123 --KILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVV--TLWYRPPDVLLGS 178

Query: 678 MPITVKVDVYSYGVLLLEIICLR 700
              +  +D++  G +L E+   R
Sbjct: 179 TEYSTPIDMWGVGCILYEMATGR 201

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 51.1 bits (122), Expect = 1e-06
 Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 29/222 (13%)

Query: 509 LGRGAFGTVY----KGFVNMGSSNHVAVKKLNSVFQ--DSEKEFKAEVNGIGQTHHKNLV 562
           LG GA+G V+        + G    + V +  ++ Q   + +  + E N +        +
Sbjct: 8   LGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFL 67

Query: 563 RLLGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGG-----LFYLH 616
             L Y  + + +L L+ +++S G + + L+   + N+    E  +    G     L +LH
Sbjct: 68  VTLHYAFQTEAKLHLILDYVSGGEMFTHLY--QRDNFS---EDEVRFYSGEIILALEHLH 122

Query: 617 EECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR 676
           +     I++ DIK +NILLD   +  ++DFGL+K    ++     +  GT  Y+APE  R
Sbjct: 123 K---LGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIR 179

Query: 677 NMPITVK-VDVYSYGVLLLEIIC--------LRRNIDNEISK 709
                 K VD +S G+L+ E++           RN  +E+S+
Sbjct: 180 GKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSR 221

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

 Score = 50.3 bits (120), Expect = 1e-06
 Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 15/151 (9%)

Query: 507 EELGRGAFGTVYKGFVNMGSS-NHVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLVRL 564
           +E+G G FG V    +   +    V VK+L +     E+ EF  + +      H N+++ 
Sbjct: 1   QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQC 60

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT-------EIAMGIAGGLFYLHE 617
           LG C E    LLV+E+   G + S+L   S+  W  R         +A  IA G+ ++H+
Sbjct: 61  LGQCVEAIPYLLVFEYCELGDLKSYL---SQEQWHRRNSQLLLLQRMACEIAAGVTHMHK 117

Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGL 648
                 +H D+  +N  L      ++ D+G+
Sbjct: 118 H---NFLHSDLALRNCFLTSDLTVKVGDYGI 145

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 50.5 bits (121), Expect = 1e-06
 Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 45/174 (25%)

Query: 494 TYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVN 551
           TYK+L        ++LG G++ TVYKG   + +   VA+K++  +  +    F A  E +
Sbjct: 6   TYKKL--------DKLGEGSYATVYKGRSKL-TGQLVALKEI-RLEHEEGAPFTAIREAS 55

Query: 552 GIGQTHHKNLVRLLGYCDEGQNRLLVYEF---------------MSNGTVASFLFGDSKP 596
            +    H N+V L       +   LV+E+               +S   V  FLF     
Sbjct: 56  LLKDLKHANIVTLHDIIHTKKTLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQ---- 111

Query: 597 NWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK 650
              LR         GL Y H+    +++H D+KPQN+L+ +    +++DFGLA+
Sbjct: 112 --LLR---------GLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLAR 151

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 49.7 bits (118), Expect = 3e-06
 Identities = 57/229 (24%), Positives = 87/229 (37%), Gaps = 47/229 (20%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE----FKAEVNGIGQTHHKNLVRL 564
           +GRGAFG V    V    + HV   K+       EKE     +AE + + +     +V++
Sbjct: 9   IGRGAFGEVR--LVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKM 66

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
                +  N  L+ EF+  G + + L    K +     E    IA  +  +        I
Sbjct: 67  FYSFQDKLNLYLIMEFLPGGDMMTLLM---KKDTLTEEETQFYIAETVLAIDSIHQLGFI 123

Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR-------------------- 664
           H DIKP N+LLD   + ++SDFGL     L ++H     R                    
Sbjct: 124 HRDIKPDNLLLDSKGHVKLSDFGLCT--GLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRK 181

Query: 665 ----------------GTKGYVAPEWFRNMPITVKVDVYSYGVLLLEII 697
                           GT  Y+APE F         D +S GV++ E++
Sbjct: 182 AETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEML 230

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 49.1 bits (118), Expect = 3e-06
 Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 9/96 (9%)

Query: 604 IAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH-YNARISDFGLAKLLTLDQSHTNTA 662
           I   +   L  LH+     IIH DIK +N+L D       + D+GL K+       T + 
Sbjct: 114 IIRQLVEALNDLHK---HNIIHNDIKLENVLYDRAKDRIYLCDYGLCKI-----IGTPSC 165

Query: 663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC 698
             GT  Y +PE  +     V  D ++ GVL  E++ 
Sbjct: 166 YDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLT 201

Length = 267

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 49.8 bits (119), Expect = 4e-06
 Identities = 59/245 (24%), Positives = 92/245 (37%), Gaps = 71/245 (28%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKLNS--VFQDSE-KEFKAEVNGIGQTHHKNLVRL 564
           +G GAFG V    V    +N + A+K L    V   ++    KAE + + +  ++ +V+L
Sbjct: 9   IGIGAFGEVC--LVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKL 66

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAG---GLFYLHEECCT 621
                +  N   V +++  G + S L             I +GI       FY+ E  C 
Sbjct: 67  YYSFQDKDNLYFVMDYIPGGDMMSLL-------------IRLGIFEEDLARFYIAELTCA 113

Query: 622 -------QIIHCDIKPQNILLDDHYNARISDFGL-------------------------- 648
                    IH DIKP NIL+D   + +++DFGL                          
Sbjct: 114 IESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEP 173

Query: 649 ---------AKLLTLDQSHTNTAIR-------GTKGYVAPEWFRNMPITVKVDVYSYGVL 692
                     +L  L++       R       GT  Y+APE       T   D +S GV+
Sbjct: 174 SEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 233

Query: 693 LLEII 697
           L E++
Sbjct: 234 LYEML 238

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 48.4 bits (115), Expect = 6e-06
 Identities = 50/198 (25%), Positives = 93/198 (46%), Gaps = 17/198 (8%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRL 564
           E+LG G++ TVYKG   +  +  +   K+ S+  +    F A  E + +    H N+V L
Sbjct: 11  EKLGEGSYATVYKGISRI--NGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLL 68

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLF----GDSKPNWKLRTEIAMGIAGGLFYLHEECC 620
                  +    V+E+M    +A ++     G    N +L       +  GL Y+H +  
Sbjct: 69  HDIIHTKETLTFVFEYMHT-DLAQYMIQHPGGLHPYNVRL---FMFQLLRGLAYIHGQ-- 122

Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE-WFRNMP 679
             I+H D+KPQN+L+      +++DFGLA+  ++  S T ++   T  Y  P+       
Sbjct: 123 -HILHRDLKPQNLLISYLGELKLADFGLARAKSI-PSQTYSSEVVTLWYRPPDVLLGATD 180

Query: 680 ITVKVDVYSYGVLLLEII 697
            +  +D++  G + +E++
Sbjct: 181 YSSALDIWGAGCIFIEML 198

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 48.9 bits (116), Expect = 6e-06
 Identities = 55/229 (24%), Positives = 87/229 (37%), Gaps = 47/229 (20%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE----FKAEVNGIGQTHHKNLVRL 564
           +GRGAFG V    V    + H+   K+       EKE     +AE + + +     +V++
Sbjct: 9   IGRGAFGEVR--LVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKM 66

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
                + +N  L+ EF+  G + + L    K +          IA  +  +        I
Sbjct: 67  FYSFQDKRNLYLIMEFLPGGDMMTLLM---KKDTLSEEATQFYIAETVLAIDAIHQLGFI 123

Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR-------------------- 664
           H DIKP N+LLD   + ++SDFGL     L ++H     R                    
Sbjct: 124 HRDIKPDNLLLDAKGHVKLSDFGLCT--GLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRK 181

Query: 665 ----------------GTKGYVAPEWFRNMPITVKVDVYSYGVLLLEII 697
                           GT  Y+APE F         D +S GV++ E++
Sbjct: 182 AETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEML 230

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 48.9 bits (116), Expect = 6e-06
 Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 25/203 (12%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYC 568
           +G G+FG VY+  + + +S  VA+KK   V QD + + + E+  +   +H N++ L  Y 
Sbjct: 74  IGNGSFGVVYEA-ICIDTSEKVAIKK---VLQDPQYKNR-ELLIMKNLNHINIIFLKDYY 128

Query: 569 ------DEGQNRLL--VYEFMSNGTVASFLFGDSKPNWKLRTEI----AMGIAGGLFYLH 616
                    +N  L  V EF+   TV  ++   ++ N  L   +    +  +   L Y+H
Sbjct: 129 YTECFKKNEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH 187

Query: 617 EECCTQIIHCDIKPQNILLDDH-YNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE-W 674
            +    I H D+KPQN+L+D + +  ++ DFG AK L   Q   +     ++ Y APE  
Sbjct: 188 SKF---ICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVSYIC--SRFYRAPELM 242

Query: 675 FRNMPITVKVDVYSYGVLLLEII 697
                 T  +D++S G ++ E+I
Sbjct: 243 LGATNYTTHIDLWSLGCIIAEMI 265

Length = 440

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 48.5 bits (115), Expect = 8e-06
 Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 22/201 (10%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ---DSEKEFKAEVNGIGQTHHKNLVRLL 565
           +GRGAFG V    V   S+  V   KL S F+    S+  F  E   I    +   V  L
Sbjct: 51  IGRGAFGEVQ--LVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 108

Query: 566 GYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLR---TEIAMGIAGGLFYLHEECCT 621
            Y  +    L +V E+M  G + + +     P    R    E+ + +      +H     
Sbjct: 109 FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDA----IHS---M 161

Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD-QSHTNTAIRGTKGYVAPEWFRNMP- 679
             IH D+KP N+LLD   + +++DFG    +  +     +TA+ GT  Y++PE  ++   
Sbjct: 162 GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGG 220

Query: 680 ---ITVKVDVYSYGVLLLEII 697
                 + D +S GV L E++
Sbjct: 221 DGYYGRECDWWSVGVFLYEML 241

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 48.1 bits (114), Expect = 9e-06
 Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 2/77 (2%)

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR--NMPI 680
           II+ DIK +NILLD + +  ++DFGL+K    D+     +  GT  Y+AP+  R  +   
Sbjct: 126 IIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGH 185

Query: 681 TVKVDVYSYGVLLLEII 697
              VD +S GVL+ E++
Sbjct: 186 DKAVDWWSMGVLMYELL 202

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 48.0 bits (115), Expect = 1e-05
 Identities = 57/237 (24%), Positives = 89/237 (37%), Gaps = 63/237 (26%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHV-AVK-----------KLNSVFQDSEKEFKAEVNGIG 554
           + LG+G  G V+   V +  +  + A+K           K+  V   +E+E  A ++   
Sbjct: 7   KLLGKGDVGRVF--LVRLKGTGKLFALKVLDKKEMIKRNKVKRVL--TEQEILATLD--- 59

Query: 555 QTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAG---- 610
              H  L  L           LV ++   G +   L    +P   L  E+A   A     
Sbjct: 60  ---HPFLPTLYASFQTETYLCLVMDYCPGGELFRLL--QRQPGKCLSEEVARFYAAEVLL 114

Query: 611 GLFYLHEECCTQIIHCDIKPQNILLDDHYNARI--SDFGLAKLLT----------LDQSH 658
            L YLH      I++ D+KP+NILL  H +  I  SDF L+K                S 
Sbjct: 115 ALEYLH---LLGIVYRDLKPENILL--HESGHIMLSDFDLSKQSDVEPPPVSKALRKGSR 169

Query: 659 TNTAIR------------------GTKGYVAPEWFRNMPITVKVDVYSYGVLLLEII 697
            ++                     GT+ Y+APE          VD ++ G+LL E++
Sbjct: 170 RSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEML 226

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 46.4 bits (110), Expect = 4e-05
 Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 9/105 (8%)

Query: 495 YKELVEVTRG---FKEELGRGAFGTVYK----GFVNMGSSNHVAVKKLNSVFQDSEKE-F 546
           Y E  E  R    F + LG GAFG V +    G     +   VAVK L +     E+E  
Sbjct: 29  YNEKWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREAL 88

Query: 547 KAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFL 590
            +E+  +     HKN+V LLG C  G   L++ E+   G + +FL
Sbjct: 89  MSELKILSHLGQHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFL 133

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 46.5 bits (110), Expect = 4e-05
 Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 10/161 (6%)

Query: 547 KAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM 606
           ++E++ +    H  +V+           LL+ E+ S G +   +    K   K       
Sbjct: 113 RSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQI----KQRLKEHLPFQE 168

Query: 607 GIAGGLFY-----LHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS-HTN 660
              G LFY     L E    +++H D+K  NI L      ++ DFG +K  +   S    
Sbjct: 169 YEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVA 228

Query: 661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRR 701
           ++  GT  Y+APE +     + K D++S GV+L E++ L R
Sbjct: 229 SSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHR 269

Length = 478

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 46.3 bits (110), Expect = 4e-05
 Identities = 50/215 (23%), Positives = 89/215 (41%), Gaps = 40/215 (18%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYC 568
           LG G+ G V+   V+      VAVKK+      S K    E+  I +  H N+V++    
Sbjct: 13  LGCGSNGLVFSA-VDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVL 71

Query: 569 DEGQNRLLVYEFMSNGT-VASFLFGDSKPNWKLRTEIAMG-------------IAGGLFY 614
               + L   E + + T + S           L   +  G             +  GL Y
Sbjct: 72  GPSGSDL--TEDVGSLTELNSVYIVQEYMETDLANVLEQGPLSEEHARLFMYQLLRGLKY 129

Query: 615 LHEECCTQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTAIRGTKGY---- 669
           +H      ++H D+KP N+ ++ +    +I DFGLA+++    SH        KGY    
Sbjct: 130 IHS---ANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSH--------KGYLSEG 178

Query: 670 VAPEWFRNMPI-------TVKVDVYSYGVLLLEII 697
           +  +W+R+  +       T  +D+++ G +  E++
Sbjct: 179 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEML 213

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 46.2 bits (109), Expect = 5e-05
 Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 10/96 (10%)

Query: 608 IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK 667
           +A G+ +L  + C   +H D+  +N+L+ +    +I DFGLA+ +  D   +N   +G+ 
Sbjct: 248 VANGMEFLASKNC---VHRDLAARNVLICEGKLVKICDFGLARDIMRD---SNYISKGST 301

Query: 668 ----GYVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
                ++APE   N   T   DV+S+G+LL EI  L
Sbjct: 302 FLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTL 337

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 45.8 bits (108), Expect = 7e-05
 Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 14/98 (14%)

Query: 608 IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK 667
           +A G+ +L  + C   +H D+  +N+LL      +I DFGLA+    D  H +  +    
Sbjct: 246 VARGMEFLASKNC---VHRDLAARNVLLAQGKIVKICDFGLAR----DIMHDSNYVSKGS 298

Query: 668 GYVAPEW------FRNMPITVKVDVYSYGVLLLEIICL 699
            ++  +W      F N+  T+  DV+SYG+LL EI  L
Sbjct: 299 TFLPVKWMAPESIFDNLYTTLS-DVWSYGILLWEIFSL 335

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 44.9 bits (106), Expect = 1e-04
 Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 4/95 (4%)

Query: 602 TEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH-TN 660
           T +A  +   + Y+H      IIH DIK +N+L++   +  + DFG A       S   +
Sbjct: 263 TAVARQLLSAIDYIH---GEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFH 319

Query: 661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLE 695
             I GT    APE     P T  VD++S G+++ E
Sbjct: 320 YGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFE 354

Length = 461

>gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional

 Score = 43.6 bits (103), Expect = 2e-04
 Identities = 37/190 (19%), Positives = 85/190 (44%), Gaps = 18/190 (9%)

Query: 517 VYKGFVNMGSSNHVAVKKLNSVFQDSEK---EFKAEVNGIGQTHHKNLVRLLGY----CD 569
           +YKG  N   +  V ++      +  +      + E+  + +    N++++ G+     D
Sbjct: 36  IYKGIFN---NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVD 92

Query: 570 EGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIK 629
           +     L+ E+ + G +   L  +   ++K + ++A+    GL+ L++   T   + ++ 
Sbjct: 93  DLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLT 150

Query: 630 PQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM--PITVKVDVY 687
             + L+ ++Y  +I   GL K+L+         +     Y + +   ++    T+K D+Y
Sbjct: 151 SVSFLVTENYKLKIICHGLEKILSSPPFKNVNFM----VYFSYKMLNDIFSEYTIKDDIY 206

Query: 688 SYGVLLLEII 697
           S GV+L EI 
Sbjct: 207 SLGVVLWEIF 216

Length = 283

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 44.0 bits (104), Expect = 2e-04
 Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 39/166 (23%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKL-NSVFQDSEKEFKAEVNGIG------------- 554
           LG G +G V K + +  +   VA+KK+      +   + +  V   G             
Sbjct: 17  LGEGTYGKVEKAY-DTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMN 75

Query: 555 QTHHKNLVRLLG-YCDEGQ-NRLLVYEFMSNGTVASFLFGDSKP--NWKLR-TE-----I 604
           +  H+N++ L+  Y +    N  LV + M+          D K   + K+R TE     I
Sbjct: 76  EIKHENIMGLVDVYVEGDFIN--LVMDIMA---------SDLKKVVDRKIRLTESQVKCI 124

Query: 605 AMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK 650
            + I  GL  LH+      +H D+ P NI ++     +I+DFGLA+
Sbjct: 125 LLQILNGLNVLHK---WYFMHRDLSPANIFINSKGICKIADFGLAR 167

Length = 335

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 43.3 bits (102), Expect = 4e-04
 Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 6/92 (6%)

Query: 505 FKEELGRGAFGTVYK----GFVNMGSSNHVAVKKLNSVFQDSEKE-FKAEVNGIGQT-HH 558
           F + LG GAFG V +    G     ++  VAVK L      +E+E   +E+  +    +H
Sbjct: 39  FGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 98

Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFL 590
            N+V LLG C  G   L++ E+   G + +FL
Sbjct: 99  INIVNLLGACTVGGPTLVITEYCCYGDLLNFL 130

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 42.8 bits (101), Expect = 4e-04
 Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 17/98 (17%)

Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKL----LT--LDQSHTNTAIR--- 664
           YLH      I+H D+KP N+L+    + +++DFGL+K+    LT  L + H     R   
Sbjct: 116 YLHN---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFL 172

Query: 665 -----GTKGYVAPEWFRNMPITVKVDVYSYGVLLLEII 697
                GT  Y+APE          VD ++ G++L E +
Sbjct: 173 DKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFL 210

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 42.7 bits (100), Expect = 5e-04
 Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 25/152 (16%)

Query: 509 LGRGAFGTV-YKGFVNMGSSNHV-AVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           LG GAFG V     V+  +   +  ++K + + ++     KAE + + +  ++ +VRL  
Sbjct: 9   LGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYY 68

Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGI---AGGLFYLHEECCT-- 621
              +  N   V +++  G + S L             I MGI       FY+ E  C   
Sbjct: 69  SFQDKDNLYFVMDYIPGGDMMSLL-------------IRMGIFPEDLARFYIAELTCAVE 115

Query: 622 -----QIIHCDIKPQNILLDDHYNARISDFGL 648
                  IH DIKP NIL+D   + +++DFGL
Sbjct: 116 SVHKMGFIHRDIKPDNILIDRDGHIKLTDFGL 147

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional

 Score = 43.0 bits (101), Expect = 5e-04
 Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 22/110 (20%)

Query: 603 EIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLD----------------DHYNARISDF 646
           +I       L Y H E    ++H D+KP+NIL++                D    RI D 
Sbjct: 235 QIIFQTGVALDYFHTE--LHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDL 292

Query: 647 GLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEI 696
           G       D+ H+ TAI  T+ Y +PE    +      D++S G ++ E+
Sbjct: 293 GGC----CDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYEL 338

Length = 467

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 41.4 bits (98), Expect = 0.001
 Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 38/205 (18%)

Query: 512 GAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE-FKA----EVNGIGQTHHKNLVRL-- 564
           G +G VY+   +  +   VA+KKL     + EKE F      E+N + +  H N+V +  
Sbjct: 16  GTYGVVYRA-RDKKTGEIVALKKLK---MEKEKEGFPITSLREINILLKLQHPNIVTVKE 71

Query: 565 --LGYCDEGQNRL-LVYEF--------MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLF 613
             +G      +++ +V E+        M       FL  + K    L  ++  G+A    
Sbjct: 72  VVVG---SNLDKIYMVMEYVEHDLKSLMETMK-QPFLQSEVK---CLMLQLLSGVA---- 120

Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE 673
           +LH+     I+H D+K  N+LL++    +I DFGLA+          T +  T  Y APE
Sbjct: 121 HLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYG-SPLKPYTQLVVTLWYRAPE 176

Query: 674 WFRNMPI-TVKVDVYSYGVLLLEII 697
                   +  +D++S G +  E++
Sbjct: 177 LLLGAKEYSTAIDMWSVGCIFAELL 201

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 41.5 bits (97), Expect = 0.001
 Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 3/83 (3%)

Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE 673
           YLHE    +IIH DIK +NI ++   +  + DFG A       ++      GT    APE
Sbjct: 197 YLHE---NRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPE 253

Query: 674 WFRNMPITVKVDVYSYGVLLLEI 696
                P    VD++S G++L E+
Sbjct: 254 LLARDPYGPAVDIWSAGIVLFEM 276

Length = 391

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 41.8 bits (98), Expect = 0.001
 Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 25/153 (16%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKL--NSVFQ-DSEKEFKAEVNGIGQTHHKNLVRL 564
           +G+GAFG V    V    +  + A+K L  + +F+ D     KAE + + ++    +V L
Sbjct: 9   IGKGAFGEVR--LVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSL 66

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI- 623
                + Q   L+ EF+  G + + L       +   +E         FY+  EC   I 
Sbjct: 67  YYSFQDAQYLYLIMEFLPGGDLMTMLI-----KYDTFSEDVT-----RFYM-AECVLAIE 115

Query: 624 -------IHCDIKPQNILLDDHYNARISDFGLA 649
                  IH DIKP NIL+D   + ++SDFGL+
Sbjct: 116 AVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLS 148

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 41.0 bits (96), Expect = 0.002
 Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 11/95 (11%)

Query: 505 FKEELGRGAFGTVYK----GFVNMGSSNHVAVKKLNSVFQDSE-KEFKAEV---NGIGQT 556
             + LGRGAFG V +    G     S   VAVK L      SE K    E+     IG  
Sbjct: 11  LGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIG-- 68

Query: 557 HHKNLVRLLGYCDEGQNRLLV-YEFMSNGTVASFL 590
           HH N+V LLG C +    L+V  E+   G ++++L
Sbjct: 69  HHLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYL 103

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|165211 PHA02882, PHA02882, putative serine/threonine kinase; Provisional

 Score = 40.3 bits (94), Expect = 0.003
 Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 9/105 (8%)

Query: 597 NWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ 656
           N KL   I   +   L Y+HE     I H DIKP+NI++D +    I D+G+A    +  
Sbjct: 124 NKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHG 180

Query: 657 SHTNTAI------RGTKGYVAPEWFRNMPITVKVDVYSYGVLLLE 695
            H   +       RGT  Y   +      +T + D+ S G  +L+
Sbjct: 181 KHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLK 225

Length = 294

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 40.0 bits (93), Expect = 0.004
 Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 6/88 (6%)

Query: 509 LGRGAFGTVYK----GFVNMGSSNHVAVKKLNSVFQDSEKE-FKAEVNGIGQTH-HKNLV 562
           LG GAFG V +    G  +  S+  VAVK L S  + SEK+   +E+  +     H N+V
Sbjct: 45  LGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIV 104

Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFL 590
            LLG C +G    ++ E+   G +  +L
Sbjct: 105 NLLGACTKGGPIYIITEYCRYGDLVDYL 132

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|214511 smart00090, RIO, RIO-like kinase

 Score = 39.6 bits (93), Expect = 0.004
 Identities = 35/170 (20%), Positives = 58/170 (34%), Gaps = 40/170 (23%)

Query: 501 VTRGFKEELGR----GAFGTVYKGFVNMGSSNHVAVK--KLN-SVFQDSEK----EFKAE 549
           + RG    +G     G    VY      GS    AVK  +     F+  ++    +F+ +
Sbjct: 24  LNRGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFK 83

Query: 550 VNGIGQTH---------HKNLVRLLGY---CDEGQNRLLVYEFMSNGTVASFLFGDSKPN 597
              I              +NL RL        +         +  N  V  F+ GD  P 
Sbjct: 84  YRKINPRKLVRLWAEKEFRNLQRLYEAGVPVPK------PIAWRRNVLVMEFIGGDGLPA 137

Query: 598 WKLR-TEIAMGIAGGLFY--------LHEECCTQIIHCDIKPQNILLDDH 638
            +L+  E        L+         L++E   +++H D+   NIL+ D 
Sbjct: 138 PRLKDVEPEEEEEFELYDDILEEMRKLYKEG--ELVHGDLSEYNILVHDG 185

Length = 237

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	792
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	100.0
KOG3653	534	consensus Transforming growth factor beta/activin	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
KOG2052	513	consensus Activin A type IB receptor, serine/threo	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
PTZ00284	467	protein kinase; Provisional	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	100.0
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	100.0
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.98
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.98
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.98
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.98
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.98
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.98
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.98
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.98
KOG0586	596	consensus Serine/threonine protein kinase [General	99.98
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.98
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.98
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.98
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.98
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.98
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.98
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.98
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.98
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.98
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.98
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.98
PLN00009	294	cyclin-dependent kinase A; Provisional	99.98
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.98
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.98
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.97
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.97
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.97
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.97
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.97
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.97
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.97
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.97
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.97
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.97
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.97
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.97
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.97
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.97
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.97
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.97
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.97
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.97
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.97
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.97
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.97
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.97
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.97
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.97
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.97
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.97
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.97
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.97
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.97
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.97
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.97
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.96
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.96
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.96
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.96
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.95
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.95
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.95
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.95
PF01453	114	B_lectin: D-mannose binding lectin; InterPro: IPR0	99.95
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.95
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.95
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.94
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.94
cd00028	116	B_lectin Bulb-type mannose-specific lectin. The do	99.94
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.94
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.93
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.93
KOG1152	772	consensus Signal transduction serine/threonine kin	99.93
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.93
smart00108	114	B_lectin Bulb-type mannose-specific lectin.	99.93
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.92
PLN00181	793	protein SPA1-RELATED; Provisional	99.91
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.91
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.9
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.9
PRK09188	365	serine/threonine protein kinase; Provisional	99.88
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.85
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.82
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.82
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.8
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.8
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.79
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.78
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.78
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.77
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.76
PF00954	110	S_locus_glycop: S-locus glycoprotein family; Inter	99.75
PRK12274	218	serine/threonine protein kinase; Provisional	99.73
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.73
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.72
PRK10345	210	hypothetical protein; Provisional	99.7
smart00090	237	RIO RIO-like kinase.	99.7
PRK14879	211	serine/threonine protein kinase; Provisional	99.65
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.65
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.64
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.64
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.64
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.62
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.61
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.53
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.53
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.52
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.51
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.48
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.37
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.32
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.18
cd01098	84	PAN_AP_plant Plant PAN/APPLE-like domain; present	99.13
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.13
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.12
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.11
KOG1243	690	consensus Protein kinase [General function predict	99.1
PF08276	66	PAN_2: PAN-like domain; InterPro: IPR013227 PAN do	99.1
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.02
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.97
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.96
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	98.92
KOG3087	229	consensus Serine/threonine protein kinase [General	98.88
cd00129	80	PAN_APPLE PAN/APPLE-like domain; present in N-term	98.74
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.68
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.68
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.65
smart00108	114	B_lectin Bulb-type mannose-specific lectin.	98.61
cd00028	116	B_lectin Bulb-type mannose-specific lectin. The do	98.58
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.5
KOG2137	700	consensus Protein kinase [Signal transduction mech	98.46
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.44
COG4248	637	Uncharacterized protein with protein kinase and he	98.42
PRK09902	216	hypothetical protein; Provisional	98.41
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.35
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.12
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.09
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.08
PF01453	114	B_lectin: D-mannose binding lectin; InterPro: IPR0	98.06
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.03
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	97.98
smart00473	78	PAN_AP divergent subfamily of APPLE domains. Apple	97.97
KOG1235	538	consensus Predicted unusual protein kinase [Genera	97.94
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	97.88
PF01636	239	APH: Phosphotransferase enzyme family This family	97.79
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.71
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	97.62
PLN02876	822	acyl-CoA dehydrogenase	97.58
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.54
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.41
PRK10593	297	hypothetical protein; Provisional	97.39
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.32
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	97.3
cd01100	73	APPLE_Factor_XI_like Subfamily of PAN/APPLE-like d	97.28
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	97.17
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.17
PRK09550	401	mtnK methylthioribose kinase; Reviewed	97.16
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	96.76
PRK05231	319	homoserine kinase; Provisional	96.74
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	96.68
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	96.1
PLN02236	344	choline kinase	95.99
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	95.97
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	95.85
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	95.74
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	95.66
PLN02756	418	S-methyl-5-thioribose kinase	95.6
KOG1236	565	consensus Predicted unusual protein kinase [Genera	95.23
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	94.98
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	94.98
KOG2268	465	consensus Serine/threonine protein kinase [Signal	94.96

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.8e-54  Score=461.99  Aligned_cols=288  Identities=44%  Similarity=0.744  Sum_probs=251.2

Q ss_pred             CccccCHHHHHHHHhhhh--hhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccc
Q 003836          489 NLRCFTYKELVEVTRGFK--EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG  566 (792)
Q Consensus       489 ~~~~~~~~el~~~~~~~~--~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g  566 (792)
                      ..+.|++.||..+|++|.  ..||+|+||+||+|.++.+  ..||||++........++|.+|++++.+++|||||+|+|
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~--~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlG  138 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDG--TVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLG  138 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCC--CEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEE
Confidence            577899999999999998  5899999999999998754  689999887654331566999999999999999999999


Q ss_pred             eeccCC-ceEEEEEeccCCCccccccCCC--CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEE
Q 003836          567 YCDEGQ-NRLLVYEFMSNGTVASFLFGDS--KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARI  643 (792)
Q Consensus       567 ~~~~~~-~~~lV~E~~~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl  643 (792)
                      ||.+.+ +++||||||++|+|.++|+...  .++|.+|++||.++|+||+|||+.+.+.||||||||+|||||+++++||
T Consensus       139 yC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKl  218 (361)
T KOG1187|consen  139 YCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKL  218 (361)
T ss_pred             EEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEc
Confidence            999999 5999999999999999999875  8999999999999999999999999999999999999999999999999


Q ss_pred             eecCCCccccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhh
Q 003836          644 SDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRY  723 (792)
Q Consensus       644 ~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~  723 (792)
                      +|||+|+..........+...||.+|+|||++..+..+.|+|||||||+|+||+||+++.+.... .....+..|+...+
T Consensus       219 sDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~-~~~~~l~~w~~~~~  297 (361)
T KOG1187|consen  219 SDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRP-RGELSLVEWAKPLL  297 (361)
T ss_pred             cCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCC-cccccHHHHHHHHH
Confidence            99999976543111111111799999999999999999999999999999999999998876442 22233778888888


Q ss_pred             cccchhHhhhchhc-ccCCH-HHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCC
Q 003836          724 QERTLEALVENDLE-AMNNV-TMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEV  779 (792)
Q Consensus       724 ~~~~~~~~~~~~~~-~~~~~-~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~  779 (792)
                      .++.+.+++|+.+. ..++. +.+.++..++.+|++.+|.+||+|.||+++|+.+...
T Consensus       298 ~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~  355 (361)
T KOG1187|consen  298 EEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL  355 (361)
T ss_pred             HCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence            88899999999987 55554 7889999999999999999999999999999766544

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=5.6e-46  Score=397.27  Aligned_cols=251  Identities=33%  Similarity=0.512  Sum_probs=213.0

Q ss_pred             hhhcCccccceEEEeeecCCCceEEEEEEcccccccc--hHHHHHHHHHhcccCCCCcccccceeccCC-ceEEEEEecc
Q 003836          506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS--EKEFKAEVNGIGQTHHKNLVRLLGYCDEGQ-NRLLVYEFMS  582 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~--~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~-~~~lV~E~~~  582 (792)
                      .+.||+|+||+||+|.+...  ..||||++.......  .++|.+|+.+|.+++|||||+++|+|.+.. ...+|||||+
T Consensus        46 ~~~iG~G~~g~V~~~~~~g~--~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~  123 (362)
T KOG0192|consen   46 EEVLGSGSFGTVYKGKWRGT--DVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMP  123 (362)
T ss_pred             hhhcccCCceeEEEEEeCCc--eeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCC
Confidence            35599999999999988632  239999998654332  569999999999999999999999999988 7999999999


Q ss_pred             CCCccccccC--CCCCchhHHHHHHHHHHHHHHHHhhccCCC-eEecCCCCCcEEEcCCC-CeEEeecCCCccccCCCCC
Q 003836          583 NGTVASFLFG--DSKPNWKLRTEIAMGIAGGLFYLHEECCTQ-IIHCDIKPQNILLDDHY-NARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       583 ~gsL~~~l~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-ivH~dikp~NILl~~~~-~~kl~Dfg~a~~~~~~~~~  658 (792)
                      +|+|.++|++  ...+++..+++|+.|||+||.|||++   + ||||||||+|||++.++ ++||+|||+++...... .
T Consensus       124 ~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~-~  199 (362)
T KOG0192|consen  124 GGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK-T  199 (362)
T ss_pred             CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeecccc-c
Confidence            9999999988  57899999999999999999999999   7 99999999999999997 99999999998765432 2


Q ss_pred             ccccccccCCcccccccc--cCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          659 TNTAIRGTKGYVAPEWFR--NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~--~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                      ..+...||+.|||||++.  ...|+.|+||||||++||||+||+.||...... .               ....++....
T Consensus       200 ~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~-~---------------~~~~v~~~~~  263 (362)
T KOG0192|consen  200 SMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV-Q---------------VASAVVVGGL  263 (362)
T ss_pred             cccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH-H---------------HHHHHHhcCC
Confidence            333467999999999999  669999999999999999999999999876431 1               1122333444


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                      +...+......+..++.+||+.||+.||++.+|+.+|+.+..
T Consensus       264 Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~  305 (362)
T KOG0192|consen  264 RPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS  305 (362)
T ss_pred             CCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence            555555577889999999999999999999999999987643

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-45  Score=373.66  Aligned_cols=258  Identities=26%  Similarity=0.360  Sum_probs=214.8

Q ss_pred             cCHHHHHHHHhhhhhhcCccccceEEEeeecCCCceEEEEEEccc-ccccchHHHHHHHHHhcccCCCCcccccceeccC
Q 003836          493 FTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNS-VFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEG  571 (792)
Q Consensus       493 ~~~~el~~~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~-~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~  571 (792)
                      ++..||+.     .+.||+|..|+|||+.+ ..+++.+|+|.+.. ......+++.+|++++++.+||+||+++|.|...
T Consensus        76 i~~~dle~-----~~~lG~G~gG~V~kv~H-k~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~  149 (364)
T KOG0581|consen   76 ISLSDLER-----LGVLGSGNGGTVYKVRH-KPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSN  149 (364)
T ss_pred             cCHHHhhh-----hhhcccCCCcEEEEEEE-cCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeC
Confidence            55566654     35799999999999965 46778999999953 3455678999999999999999999999999988


Q ss_pred             C-ceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCc
Q 003836          572 Q-NRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK  650 (792)
Q Consensus       572 ~-~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~  650 (792)
                      . ...|+||||++|||+.++...+++++....+|+.+|++||.|||+.  .+||||||||+|||++..|++||+|||.++
T Consensus       150 ~~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFGVS~  227 (364)
T KOG0581|consen  150 GEEISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFGVSG  227 (364)
T ss_pred             CceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEeccccccH
Confidence            8 5999999999999999998888899999999999999999999973  399999999999999999999999999999


Q ss_pred             cccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhH
Q 003836          651 LLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEA  730 (792)
Q Consensus       651 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  730 (792)
                      .+...   ......||..|||||.+++..|+.++||||||+.++|+.+|+.|+.........     |.      ..+..
T Consensus       228 ~lvnS---~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~-----~~------~Ll~~  293 (364)
T KOG0581|consen  228 ILVNS---IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLD-----IF------ELLCA  293 (364)
T ss_pred             Hhhhh---hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCC-----HH------HHHHH
Confidence            87644   445677999999999999999999999999999999999999999764111000     00      11233


Q ss_pred             hhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          731 LVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       731 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ++++..........++++.+++..||+.||.+||+++|++++
T Consensus       294 Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H  335 (364)
T KOG0581|consen  294 IVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH  335 (364)
T ss_pred             HhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            343222222222488899999999999999999999999874

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=4.3e-45  Score=387.78  Aligned_cols=259  Identities=29%  Similarity=0.411  Sum_probs=222.8

Q ss_pred             HHHHhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEE
Q 003836          499 VEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       499 ~~~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~  578 (792)
                      ......+.+.||+|-||.||+|.++..  ..||+|.++.. ....+.|.+|+++|.+|+|+|||+++|+|..++.++|||
T Consensus       204 ~r~~l~l~~~LG~G~FG~V~~g~~~~~--~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVt  280 (468)
T KOG0197|consen  204 PREELKLIRELGSGQFGEVWLGKWNGS--TKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVT  280 (468)
T ss_pred             cHHHHHHHHHhcCCccceEEEEEEcCC--CcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEE
Confidence            333445678899999999999998743  36999999865 445678999999999999999999999999999999999


Q ss_pred             EeccCCCccccccC--CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC
Q 003836          579 EFMSNGTVASFLFG--DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       579 E~~~~gsL~~~l~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~  656 (792)
                      |||+.|+|.+||..  ...+...+.+.++.|||+||+||+++   ++|||||.++|||++++..+||+|||+||....+.
T Consensus       281 E~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~  357 (468)
T KOG0197|consen  281 EYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDE  357 (468)
T ss_pred             EecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCCc
Confidence            99999999999986  46789999999999999999999999   99999999999999999999999999999655554


Q ss_pred             CCccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          657 SHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       657 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                      ........-...|.|||.+....|+.|||||||||+||||+| |+.|+....                 ...+.+.++..
T Consensus       358 Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ms-----------------n~ev~~~le~G  420 (468)
T KOG0197|consen  358 YTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMS-----------------NEEVLELLERG  420 (468)
T ss_pred             eeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCC-----------------HHHHHHHHhcc
Confidence            444444445668999999999999999999999999999998 555654432                 22345667778


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCCC
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP  780 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~~  780 (792)
                      .+...|..++..+.++|..||+.+|++|||++.+...|+.+....
T Consensus       421 yRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~  465 (468)
T KOG0197|consen  421 YRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTST  465 (468)
T ss_pred             CcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhcc
Confidence            888888899999999999999999999999999999998875543

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.6e-44  Score=368.07  Aligned_cols=248  Identities=25%  Similarity=0.401  Sum_probs=205.6

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccccc-------chHHHHHHHHHhcccCCCCcccccceeccCCceE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD-------SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRL  575 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~-------~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~  575 (792)
                      +-+.+.||+|+||.|-+|. +..+++.||||++++....       .....++|+++|++++|||||++++++...+..|
T Consensus       174 yii~~~LGsGafg~Vkla~-e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~Y  252 (475)
T KOG0615|consen  174 YIISKTLGSGAFGLVKLAY-EKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSY  252 (475)
T ss_pred             eEeeeeecCCceeEEEEEE-EcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceE
Confidence            3446789999999999995 5677899999999764322       2334679999999999999999999999999999


Q ss_pred             EEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC---CCeEEeecCCCccc
Q 003836          576 LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH---YNARISDFGLAKLL  652 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~---~~~kl~Dfg~a~~~  652 (792)
                      ||||||++|.|.+++-.++.+.+..-..++.|++.|+.|||++   ||+||||||+|||+..+   ..+||+|||+|+..
T Consensus       253 mVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~  329 (475)
T KOG0615|consen  253 MVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDFGLAKVS  329 (475)
T ss_pred             EEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEecccchhhcc
Confidence            9999999999999999999999999999999999999999999   99999999999999866   77999999999986


Q ss_pred             cCCCCCccccccccCCcccccccccCC---CCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchh
Q 003836          653 TLDQSHTNTAIRGTKGYVAPEWFRNMP---ITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLE  729 (792)
Q Consensus       653 ~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  729 (792)
                      .  +..-..+.+|||.|.|||++.++.   +..|.|+||+||+||-+++|..||.....+..               ..+
T Consensus       330 g--~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s---------------l~e  392 (475)
T KOG0615|consen  330 G--EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS---------------LKE  392 (475)
T ss_pred             c--cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc---------------HHH
Confidence            5  344456789999999999997654   33588999999999999999999976543310               011


Q ss_pred             Hhhhchh--cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          730 ALVENDL--EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       730 ~~~~~~~--~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ++.....  .+..-.+.+++..+++.+||..||++|||++|+++
T Consensus       393 QI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~  436 (475)
T KOG0615|consen  393 QILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN  436 (475)
T ss_pred             HHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence            1111111  11223456788999999999999999999999987

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-43  Score=362.77  Aligned_cols=198  Identities=28%  Similarity=0.464  Sum_probs=180.2

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccc--cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV--FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.++||+|+|++||+|++... +..||||.+.+.  .....+.+..|+.+|+.++|||||++++++..++..+||||||.
T Consensus        14 ~~~~iG~GsfavVykg~h~~~-~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~   92 (429)
T KOG0595|consen   14 LSREIGSGSFAVVYKGRHKKS-GTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCN   92 (429)
T ss_pred             ehhhccCcceEEEEEeEeccC-CceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCC
Confidence            346699999999999987654 489999999775  55567788999999999999999999999999999999999999


Q ss_pred             CCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC------CCeEEeecCCCccccCCC
Q 003836          583 NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH------YNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       583 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~------~~~kl~Dfg~a~~~~~~~  656 (792)
                      +|+|..|++.++.+++.....++.|||.||++||++   +||||||||.||||+..      -.+||+|||+|+.+.  .
T Consensus        93 gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~--~  167 (429)
T KOG0595|consen   93 GGDLSDYIRRRGRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQ--P  167 (429)
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccchhhhCC--c
Confidence            999999999999999999999999999999999999   99999999999999865      458999999999886  3


Q ss_pred             CCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchh
Q 003836          657 SHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEIS  708 (792)
Q Consensus       657 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~  708 (792)
                      .....+.+|++-|||||+++..+|+.|+|+||.|++|||+++|+.||+....
T Consensus       168 ~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~  219 (429)
T KOG0595|consen  168 GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETP  219 (429)
T ss_pred             hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCH
Confidence            4445568899999999999999999999999999999999999999986543

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=9.7e-44  Score=395.00  Aligned_cols=260  Identities=26%  Similarity=0.405  Sum_probs=218.4

Q ss_pred             HHHhhhhhhcCccccceEEEeeecC----CCceEEEEEEccccccc-chHHHHHHHHHhcccCCCCcccccceeccCCce
Q 003836          500 EVTRGFKEELGRGAFGTVYKGFVNM----GSSNHVAVKKLNSVFQD-SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNR  574 (792)
Q Consensus       500 ~~~~~~~~~lG~G~~g~Vy~g~~~~----~~~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~  574 (792)
                      .....+.++||+|+||.||+|....    .....||||.+++.... .+++|++|+++++.++|||||+|+|+|.+++..
T Consensus       485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~  564 (774)
T KOG1026|consen  485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPL  564 (774)
T ss_pred             hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCee
Confidence            3334467889999999999997743    34568999999987665 778999999999999999999999999999999


Q ss_pred             EEEEEeccCCCccccccCC----------CC----CchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCC
Q 003836          575 LLVYEFMSNGTVASFLFGD----------SK----PNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYN  640 (792)
Q Consensus       575 ~lV~E~~~~gsL~~~l~~~----------~~----l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~  640 (792)
                      ++|+|||..|+|.+||..+          ..    ++..+.+.||.|||.||.||.++   .+|||||..+|+||.++..
T Consensus       565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l~  641 (774)
T KOG1026|consen  565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENLV  641 (774)
T ss_pred             EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccceE
Confidence            9999999999999999642          12    77889999999999999999999   9999999999999999999


Q ss_pred             eEEeecCCCccccCCCCCccc-cccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHH
Q 003836          641 ARISDFGLAKLLTLDQSHTNT-AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDW  718 (792)
Q Consensus       641 ~kl~Dfg~a~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~  718 (792)
                      +||+|||++|.......+... .-.-.++|||||.+..++||.+||||||||+||||++ |+.|+.....+         
T Consensus       642 VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~---------  712 (774)
T KOG1026|consen  642 VKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ---------  712 (774)
T ss_pred             EEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchH---------
Confidence            999999999976544433322 2234678999999999999999999999999999997 67777654322         


Q ss_pred             HHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCC
Q 003836          719 AYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEV  779 (792)
Q Consensus       719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~  779 (792)
                              .+.+.+..+-....+...+.++..||..||+.+|++||+++||-..|+.....
T Consensus       713 --------EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~  765 (774)
T KOG1026|consen  713 --------EVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA  765 (774)
T ss_pred             --------HHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence                    22223333333667888999999999999999999999999999999886544

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=6.9e-43  Score=374.09  Aligned_cols=247  Identities=23%  Similarity=0.364  Sum_probs=210.7

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      |...+.||+|+|+.||+++. ..+++.||+|++.+..   ....+.+.+||++.++|+|||||+++++|++.+++|||.|
T Consensus        20 Y~~g~~LGkGgFA~cYe~~~-~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLE   98 (592)
T KOG0575|consen   20 YKRGRFLGKGGFARCYEARD-LDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLE   98 (592)
T ss_pred             eeeeeeeccCcceEEEEEEE-cCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEE
Confidence            33456899999999999975 3567899999997632   3345678999999999999999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      +|++++|.+++.+++.+++.+.+.+..||+.||.|||+.   +|+|||||..|++|+++.++||+|||+|..+..+. +.
T Consensus        99 LC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~-Er  174 (592)
T KOG0575|consen   99 LCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG-ER  174 (592)
T ss_pred             ecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecCcc-cc
Confidence            999999999999889999999999999999999999999   99999999999999999999999999999886543 34


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      ..+++|||.|.|||++....++..+||||+||+||-|+.|++||+...-...                ...+.....  .
T Consensus       175 k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vket----------------y~~Ik~~~Y--~  236 (592)
T KOG0575|consen  175 KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKET----------------YNKIKLNEY--S  236 (592)
T ss_pred             cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHH----------------HHHHHhcCc--c
Confidence            4578899999999999999999999999999999999999999976532211                111111111  1


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .|...+.+..+||.++|+.||.+|||+++|+..
T Consensus       237 ~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h  269 (592)
T KOG0575|consen  237 MPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH  269 (592)
T ss_pred             cccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            233566788899999999999999999999963

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=4e-43  Score=381.34  Aligned_cols=271  Identities=25%  Similarity=0.459  Sum_probs=233.2

Q ss_pred             ccccCHHHHHHHHhhhh-----------hhcCccccceEEEeeecCCC--ceEEEEEEccccccc-chHHHHHHHHHhcc
Q 003836          490 LRCFTYKELVEVTRGFK-----------EELGRGAFGTVYKGFVNMGS--SNHVAVKKLNSVFQD-SEKEFKAEVNGIGQ  555 (792)
Q Consensus       490 ~~~~~~~el~~~~~~~~-----------~~lG~G~~g~Vy~g~~~~~~--~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~  555 (792)
                      ...++|+|--++...|.           ++||.|.||.|++|.+...+  ...||||.++....+ .+.+|+.|+.||.+
T Consensus       607 iDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQ  686 (996)
T KOG0196|consen  607 IDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQ  686 (996)
T ss_pred             cCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhccc
Confidence            34578887777776664           45999999999999987544  457999999976554 45689999999999


Q ss_pred             cCCCCcccccceeccCCceEEEEEeccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEE
Q 003836          556 THHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNIL  634 (792)
Q Consensus       556 l~h~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NIL  634 (792)
                      ++||||++|.|+....+..+||.|||+||+|+.||+.+ ..+.+.+...++++||.||+||.+.   ++|||||.++|||
T Consensus       687 FdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNIL  763 (996)
T KOG0196|consen  687 FDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNIL  763 (996)
T ss_pred             CCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhc---Cchhhhhhhhhee
Confidence            99999999999999999999999999999999999865 5789999999999999999999998   9999999999999


Q ss_pred             EcCCCCeEEeecCCCccccCCCCCccccccc--cCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhh
Q 003836          635 LDDHYNARISDFGLAKLLTLDQSHTNTAIRG--TKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVD  711 (792)
Q Consensus       635 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~  711 (792)
                      ++.+..+|++|||++|.+..+.....+..-|  ..+|.|||.+...++|.++||||||++|||+++ |.+|+-+...   
T Consensus       764 VNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN---  840 (996)
T KOG0196|consen  764 VNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN---  840 (996)
T ss_pred             eccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch---
Confidence            9999999999999999887665333333322  568999999999999999999999999999885 8888754432   


Q ss_pred             hhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCCC
Q 003836          712 KAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP  780 (792)
Q Consensus       712 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~~  780 (792)
                                    .++..-+++..+...+++++..|.+||+.|||.|-.+||.+.||+.+|++++.-|
T Consensus       841 --------------QdVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP  895 (996)
T KOG0196|consen  841 --------------QDVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNP  895 (996)
T ss_pred             --------------HHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCc
Confidence                          3344556677788889999999999999999999999999999999999987543

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5e-42  Score=332.93  Aligned_cols=255  Identities=24%  Similarity=0.357  Sum_probs=205.1

Q ss_pred             HhhhhhhcCccccceEEEeeecCCCceEEEEEEccc--ccccchHHHHHHHHHhcccCCCCcccccc-eeccCCc-eEEE
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNS--VFQDSEKEFKAEVNGIGQTHHKNLVRLLG-YCDEGQN-RLLV  577 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~--~~~~~~~~~~~Ei~~l~~l~h~niv~l~g-~~~~~~~-~~lV  577 (792)
                      .+.+.++||+|.||+|||+.. ..++..+|.|.+.-  .+....+.+..|+.+|++|+|||||++++ -+.+.++ ++||
T Consensus        20 ~y~Il~~IG~GsFg~vykv~~-~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv   98 (375)
T KOG0591|consen   20 DYQILKKIGRGSFGEVYKVQC-LLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV   98 (375)
T ss_pred             HHHHHHHHcCCcchheEEeee-ccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence            355678999999999999964 45678999998862  23444567899999999999999999999 5566666 7899


Q ss_pred             EEeccCCCccccccC----CCCCchhHHHHHHHHHHHHHHHHhhccCC-CeEecCCCCCcEEEcCCCCeEEeecCCCccc
Q 003836          578 YEFMSNGTVASFLFG----DSKPNWKLRTEIAMGIAGGLFYLHEECCT-QIIHCDIKPQNILLDDHYNARISDFGLAKLL  652 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~  652 (792)
                      |||+..|+|...+..    ++.++++.+++++.|+++||..+|.+... -|+||||||.||+|+.+|.+||+|||+++.+
T Consensus        99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l  178 (375)
T KOG0591|consen   99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL  178 (375)
T ss_pred             HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence            999999999998853    46789999999999999999999994322 3999999999999999999999999999998


Q ss_pred             cCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhh
Q 003836          653 TLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALV  732 (792)
Q Consensus       653 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  732 (792)
                      ...... ....+|||.||+||.+.+.+|+.|+||||+||++|||+..+.||....-.       .          +..-+
T Consensus       179 ~s~~tf-A~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~-------~----------L~~KI  240 (375)
T KOG0591|consen  179 SSKTTF-AHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLL-------S----------LCKKI  240 (375)
T ss_pred             cchhHH-HHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHH-------H----------HHHHH
Confidence            755443 34567999999999999999999999999999999999999999765110       0          00111


Q ss_pred             hc-hhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhcc
Q 003836          733 EN-DLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEG  775 (792)
Q Consensus       733 ~~-~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~  775 (792)
                      .+ +.....+...+.++..++..|+..||+.||+...+++.+..
T Consensus       241 ~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~  284 (375)
T KOG0591|consen  241 EQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS  284 (375)
T ss_pred             HcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence            11 11111225678899999999999999999996555555443

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-40  Score=343.37  Aligned_cols=252  Identities=26%  Similarity=0.399  Sum_probs=203.7

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCC--ceEEEEEec
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQ--NRLLVYEFM  581 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~--~~~lV~E~~  581 (792)
                      ...+.||+|+||+||++.... +++..|||.+........+.+.+|+.+|.+++|||||+++|......  .++++|||+
T Consensus        20 ~~~~~lG~Gs~G~V~l~~~~~-~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~   98 (313)
T KOG0198|consen   20 SKGKLLGRGSFGSVYLATNKK-TGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYA   98 (313)
T ss_pred             hhhccccCccceEEEEEEecC-CCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeecc
Confidence            345789999999999997643 36789999987653333667999999999999999999999854444  688999999


Q ss_pred             cCCCccccccCCC-CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC-CCCeEEeecCCCccccC--CCC
Q 003836          582 SNGTVASFLFGDS-KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD-HYNARISDFGLAKLLTL--DQS  657 (792)
Q Consensus       582 ~~gsL~~~l~~~~-~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~-~~~~kl~Dfg~a~~~~~--~~~  657 (792)
                      ++|+|.+++.+.. .+++..+.+++.||++||+|||++   +|+||||||+|||++. ++.+||+|||+++....  ...
T Consensus        99 ~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~  175 (313)
T KOG0198|consen   99 PGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKS  175 (313)
T ss_pred             CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCccccccccccccc
Confidence            9999999998766 799999999999999999999998   9999999999999999 79999999999997764  222


Q ss_pred             CccccccccCCcccccccccC-CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          658 HTNTAIRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       658 ~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                      .......||+.|||||++..+ ....++|||||||++.||+||+.||.......      .+         +..+.....
T Consensus       176 ~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~------~~---------~~~ig~~~~  240 (313)
T KOG0198|consen  176 DSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEA------EA---------LLLIGREDS  240 (313)
T ss_pred             cccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchH------HH---------HHHHhccCC
Confidence            334457899999999999863 34459999999999999999999986531100      00         011111112


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhc
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE  774 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~  774 (792)
                      .+..+...+.+..+++..|++.+|++|||++++++..-
T Consensus       241 ~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf  278 (313)
T KOG0198|consen  241 LPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPF  278 (313)
T ss_pred             CCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChh
Confidence            23455567788899999999999999999999998653

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-40  Score=349.84  Aligned_cols=250  Identities=30%  Similarity=0.473  Sum_probs=213.3

Q ss_pred             ccccCHHHHHHHHhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceec
Q 003836          490 LRCFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCD  569 (792)
Q Consensus       490 ~~~~~~~el~~~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~  569 (792)
                      +..+.|++|.+.     +-||.|+.|.||+|.++   ++.||||+++..       -+.+|+-|++|+|+||+.+.|+|.
T Consensus       118 ~WeiPFe~IsEL-----eWlGSGaQGAVF~Grl~---netVAVKKV~el-------kETdIKHLRkLkH~NII~FkGVCt  182 (904)
T KOG4721|consen  118 LWEIPFEEISEL-----EWLGSGAQGAVFLGRLH---NETVAVKKVREL-------KETDIKHLRKLKHPNIITFKGVCT  182 (904)
T ss_pred             hccCCHHHhhhh-----hhhccCcccceeeeecc---CceehhHHHhhh-------hhhhHHHHHhccCcceeeEeeeec
Confidence            455677777654     34999999999999987   467999998642       245788899999999999999999


Q ss_pred             cCCceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCC
Q 003836          570 EGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLA  649 (792)
Q Consensus       570 ~~~~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a  649 (792)
                      ....++||||||+.|.|.++|+....+.......+..+||.||.|||.+   .|||||||.-||||..+..+||+|||-+
T Consensus       183 qsPcyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS  259 (904)
T KOG4721|consen  183 QSPCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTS  259 (904)
T ss_pred             CCceeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccch
Confidence            9999999999999999999999999999999999999999999999999   9999999999999999999999999999


Q ss_pred             ccccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchh
Q 003836          650 KLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLE  729 (792)
Q Consensus       650 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  729 (792)
                      +.....  .....+.||..|||||++++.+.++|.||||||||||||+||..|+.+..+...                +.
T Consensus       260 ~e~~~~--STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI----------------Iw  321 (904)
T KOG4721|consen  260 KELSDK--STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI----------------IW  321 (904)
T ss_pred             Hhhhhh--hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee----------------EE
Confidence            876533  344567899999999999999999999999999999999999999965433211                11


Q ss_pred             HhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhcc
Q 003836          730 ALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEG  775 (792)
Q Consensus       730 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~  775 (792)
                      .+=...+....+..+++-+.-|+++||+..|..||++++|+..|+-
T Consensus       322 GVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldI  367 (904)
T KOG4721|consen  322 GVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDI  367 (904)
T ss_pred             eccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence            1122334444566677788889999999999999999999999864

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=3.2e-40  Score=335.11  Aligned_cols=238  Identities=24%  Similarity=0.316  Sum_probs=201.5

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +.++||+|+||+||.++.. ++++.+|+|.+++..   ....+...+|..+|.+++||.||+++-.|.+..++|||+||+
T Consensus        29 ~lkviGkG~fGkV~~Vrk~-dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~  107 (357)
T KOG0598|consen   29 ILKVIGKGSFGKVFQVRKK-DTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYL  107 (357)
T ss_pred             eeeeeeccCCceEEEEEEc-ccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEecc
Confidence            4578999999999999765 778899999998643   334567899999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      .||.|..+|.+...+++....-++..|+.||.|||++   +||||||||+|||||++|+++|+|||+++...... ....
T Consensus       108 ~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~-~~t~  183 (357)
T KOG0598|consen  108 NGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDG-DATR  183 (357)
T ss_pred             CCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhcccCC-Cccc
Confidence            9999999999999999999999999999999999999   99999999999999999999999999999654332 2334


Q ss_pred             cccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCC
Q 003836          662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN  741 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  741 (792)
                      +++||+.|||||++.+..|+..+|.||+|+++|||++|.+||.........                +.+.... ....+
T Consensus       184 tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~----------------~~I~~~k-~~~~p  246 (357)
T KOG0598|consen  184 TFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMY----------------DKILKGK-LPLPP  246 (357)
T ss_pred             cccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHH----------------HHHhcCc-CCCCC
Confidence            578999999999999999999999999999999999999999765432111                1111111 11122


Q ss_pred             HHHHHHHHHHHHHccccCCCCCC
Q 003836          742 VTMLHRFVMVAFWCIQEDPSHRP  764 (792)
Q Consensus       742 ~~~~~~l~~l~~~Cl~~~p~~RP  764 (792)
                      .-...+..+++...|+.||++|.
T Consensus       247 ~~ls~~ardll~~LL~rdp~~RL  269 (357)
T KOG0598|consen  247 GYLSEEARDLLKKLLKRDPRQRL  269 (357)
T ss_pred             ccCCHHHHHHHHHHhccCHHHhc
Confidence            23556788899999999999995

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=7.9e-40  Score=320.76  Aligned_cols=259  Identities=21%  Similarity=0.294  Sum_probs=203.1

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccc--cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCC
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ--DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNG  584 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~g  584 (792)
                      .++|+|+||.|||++ +..+++.||||++.....  ...+-.++||++|++++|+|+|.|+.+|......+||+||++..
T Consensus         8 gkvGEGSYGvV~KCr-nk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dhT   86 (396)
T KOG0593|consen    8 GKVGEGSYGVVMKCR-NKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDHT   86 (396)
T ss_pred             hccccCcceEEEEec-cCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecchH
Confidence            469999999999996 457889999999976433  34567899999999999999999999999999999999999985


Q ss_pred             CccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccccc
Q 003836          585 TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR  664 (792)
Q Consensus       585 sL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  664 (792)
                      -|+++=+....++.....+++.|+++|+.|+|+.   ++|||||||+||||+.++.+||+|||+|+.+.. .....+..+
T Consensus        87 vL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~-pgd~YTDYV  162 (396)
T KOG0593|consen   87 VLHELERYPNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSA-PGDNYTDYV  162 (396)
T ss_pred             HHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcC-Ccchhhhhh
Confidence            5555544446788999999999999999999999   999999999999999999999999999999875 344445667


Q ss_pred             ccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHH--------hhcc-cchhHhhhc
Q 003836          665 GTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYD--------RYQE-RTLEALVEN  734 (792)
Q Consensus       665 gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~--------~~~~-~~~~~~~~~  734 (792)
                      .|..|+|||.+.+ .+|+...||||.||++.||++|...|...++. ++.........        .+.. +....+.-+
T Consensus       163 ATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDi-DQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP  241 (396)
T KOG0593|consen  163 ATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDI-DQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLP  241 (396)
T ss_pred             hhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchH-HHHHHHHHHHcccCHHHHHHhccCCceeeeecC
Confidence            8999999999987 79999999999999999999999888655432 22221111111        1111 111111111


Q ss_pred             hhcccCC-----HHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          735 DLEAMNN-----VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       735 ~~~~~~~-----~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ......+     +..+.-+++++..||+.||++|++-+|++.
T Consensus       242 ~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~  283 (396)
T KOG0593|consen  242 EPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH  283 (396)
T ss_pred             CCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence            1111111     234567899999999999999999999885

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=5.4e-40  Score=345.71  Aligned_cols=248  Identities=24%  Similarity=0.334  Sum_probs=210.3

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      .|.+.||+|+|++|+++.. ..+++.+|||++.+..   +...+-+..|-.+|.+| .||.|++|+-.|.+...+|+|+|
T Consensus        76 ~Fg~~lGeGSYStV~~A~~-~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe  154 (604)
T KOG0592|consen   76 KFGKILGEGSYSTVVLARE-KATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLE  154 (604)
T ss_pred             chhheeccccceeEEEeee-cCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEE
Confidence            4678999999999999964 4578899999997643   33445678899999999 89999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC-
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH-  658 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~-  658 (792)
                      |+++|+|.++|++-+.+++.-...++.+|+.||+|||+.   |||||||||+|||||+++++||.|||.|+.+...... 
T Consensus       155 ~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~  231 (604)
T KOG0592|consen  155 YAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQ  231 (604)
T ss_pred             ecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccccCChhhccc
Confidence            999999999999999999999999999999999999999   9999999999999999999999999999988653322 


Q ss_pred             ---------cc--ccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccc
Q 003836          659 ---------TN--TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERT  727 (792)
Q Consensus       659 ---------~~--~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  727 (792)
                               ..  ..++||..|.+||++.....+..+|+|+|||+||+|+.|+.||....+-..                
T Consensus       232 ~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyli----------------  295 (604)
T KOG0592|consen  232 ENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLI----------------  295 (604)
T ss_pred             cCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHH----------------
Confidence                     11  447899999999999999999999999999999999999999976533211                


Q ss_pred             hhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHh
Q 003836          728 LEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQML  773 (792)
Q Consensus       728 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L  773 (792)
                      .+.+++-  .-.++...++.+.+|+.+.|..||.+|++.+||.+..
T Consensus       296 FqkI~~l--~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~Hp  339 (604)
T KOG0592|consen  296 FQKIQAL--DYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHP  339 (604)
T ss_pred             HHHHHHh--cccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCc
Confidence            1111111  1123444557788999999999999999999998863

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-40  Score=357.86  Aligned_cols=259  Identities=27%  Similarity=0.368  Sum_probs=214.1

Q ss_pred             hhhhhcCccccceEEEeeecCCCc---eEEEEEEccc---ccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSS---NHVAVKKLNS---VFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLV  577 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~---~~vavK~~~~---~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV  577 (792)
                      .+.++||+|+||.||+|.+.....   ..||||..+.   ......++|.+|.+++++++|||||+++|++.....++||
T Consensus       160 ~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~iv  239 (474)
T KOG0194|consen  160 ELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLV  239 (474)
T ss_pred             cccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEE
Confidence            345789999999999999976533   2389999885   3456678999999999999999999999999999999999


Q ss_pred             EEeccCCCccccccCCC-CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC
Q 003836          578 YEFMSNGTVASFLFGDS-KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~~-~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~  656 (792)
                      ||+|+||+|+++|...+ .++..++.+++.+.|.||+|||++   ++|||||.++|+|++.+..+||+|||+++......
T Consensus       240 mEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~  316 (474)
T KOG0194|consen  240 MELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYV  316 (474)
T ss_pred             EEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCccccccCCccee
Confidence            99999999999998876 599999999999999999999999   99999999999999999999999999998654111


Q ss_pred             CCccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          657 SHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       657 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                      .. .....-...|+|||.+..+.|+.++|||||||++||+++ |..|+.......                ....++...
T Consensus       317 ~~-~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~----------------v~~kI~~~~  379 (474)
T KOG0194|consen  317 MK-KFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYE----------------VKAKIVKNG  379 (474)
T ss_pred             ec-cccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHH----------------HHHHHHhcC
Confidence            11 111234678999999999999999999999999999998 777886543221                111222344


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCCCCC
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPIP  782 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~~~p  782 (792)
                      .+...+...+.++..++.+|++.+|++||+|.++.+.|+.+.....+
T Consensus       380 ~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~  426 (474)
T KOG0194|consen  380 YRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA  426 (474)
T ss_pred             ccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence            44555556777888899999999999999999999999887655443

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=7.8e-40  Score=348.47  Aligned_cols=253  Identities=27%  Similarity=0.410  Sum_probs=203.0

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccc--cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV--FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.||+|.||+||+|.++.    .||||+++..  ..+..+.|++|+.++++-+|.||+-+.|+|..+.. .||..+|+
T Consensus       396 l~~rIGsGsFGtV~Rg~whG----dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwCe  470 (678)
T KOG0193|consen  396 LGERIGSGSFGTVYRGRWHG----DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWCE  470 (678)
T ss_pred             ccceeccccccceeeccccc----ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhcc
Confidence            45679999999999999873    5999999754  34456789999999999999999999999999888 99999999


Q ss_pred             CCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCC-CCCcc
Q 003836          583 NGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD-QSHTN  660 (792)
Q Consensus       583 ~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~-~~~~~  660 (792)
                      +.+|..+|+-. .+++..+.+.||+|||+||.|||.+   +|||||||..||+|.++++|||.|||++.....- .....
T Consensus       471 GsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~  547 (678)
T KOG0193|consen  471 GSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQL  547 (678)
T ss_pred             CchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEecccceeeeeeecccccc
Confidence            99999999865 5788899999999999999999999   9999999999999999999999999999764332 11122


Q ss_pred             ccccccCCccccccccc---CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhc
Q 003836          661 TAIRGTKGYVAPEWFRN---MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLE  737 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~---~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  737 (792)
                      ....|..-|||||+++.   .+|+..+||||||+++|||+||..|+....  .++.++.     ..+.....++..    
T Consensus       548 ~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~--~dqIifm-----VGrG~l~pd~s~----  616 (678)
T KOG0193|consen  548 EQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQN--RDQIIFM-----VGRGYLMPDLSK----  616 (678)
T ss_pred             CCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCC--hhheEEE-----ecccccCccchh----
Confidence            22347788999999863   579999999999999999999999997322  1111110     000000011111    


Q ss_pred             ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          738 AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       738 ~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                        ......+++.+|+..||..++++||.+.+|+.+|+.++.
T Consensus       617 --~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~  655 (678)
T KOG0193|consen  617 --IRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP  655 (678)
T ss_pred             --hhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence              122456678889999999999999999999998888765

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=8.3e-39  Score=334.15  Aligned_cols=260  Identities=23%  Similarity=0.278  Sum_probs=206.4

Q ss_pred             hhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccC--CceEEEEEec
Q 003836          506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEG--QNRLLVYEFM  581 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~--~~~~lV~E~~  581 (792)
                      .++||+|.||.|||+.. ..+++.||+|++....  ........+||.+|++|+||||++|.+...+.  ..+|||+|||
T Consensus       122 i~kIGeGTyg~VYkAr~-~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYM  200 (560)
T KOG0600|consen  122 IEKIGEGTYGQVYKARD-LETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYM  200 (560)
T ss_pred             HHHhcCcchhheeEeee-cccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecc
Confidence            46799999999999964 5677899999987543  34456678999999999999999999988766  6899999999


Q ss_pred             cCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          582 SNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       582 ~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +. +|.-++... -.+++.++..++.|++.||+|+|++   +|+|||||.+|||||.+|.+||+|||+|+++........
T Consensus       201 dh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~  276 (560)
T KOG0600|consen  201 DH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPY  276 (560)
T ss_pred             cc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeeccCCCCccc
Confidence            98 888888764 4789999999999999999999999   999999999999999999999999999999888777777


Q ss_pred             ccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH----HHHhhcccchh--Hhhh
Q 003836          661 TAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW----AYDRYQERTLE--ALVE  733 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~--~~~~  733 (792)
                      +..+-|..|+|||++.+ ..|+.+.|+||.||||.||++|+..|....+..+...+...    ....|...++.  ..+.
T Consensus       277 T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~k  356 (560)
T KOG0600|consen  277 TSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFK  356 (560)
T ss_pred             ccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccC
Confidence            88888999999999876 57999999999999999999999998765543322221110    00111111111  0000


Q ss_pred             c------hhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          734 N------DLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       734 ~------~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      +      .+... ....+...++|+..+|..||.+|.|+.++++
T Consensus       357 p~~~y~r~l~E~-~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~  399 (560)
T KOG0600|consen  357 PQQPYKRRLRET-FKDFPASALDLLEKLLSLDPDKRGTASSALQ  399 (560)
T ss_pred             CCCcccchHHHH-hccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence            0      01100 1223466788999999999999999999886

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=2.4e-39  Score=352.47  Aligned_cols=258  Identities=27%  Similarity=0.387  Sum_probs=200.7

Q ss_pred             HhhhhhhcCccccceEEEeeec----CCCceEEEEEEcccccc-cchHHHHHHHHHhccc-CCCCcccccceeccCC-ce
Q 003836          502 TRGFKEELGRGAFGTVYKGFVN----MGSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQ-NR  574 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~----~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~-~~  574 (792)
                      .+.+.++||+|+||.||+|...    ...++.||||++..... ...+.+.+|+.++.++ +||||++++++|...+ ..
T Consensus         8 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~   87 (338)
T cd05102           8 RLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPL   87 (338)
T ss_pred             HceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCce
Confidence            3456688999999999999642    23346799999875432 3346789999999999 8999999999887654 57


Q ss_pred             EEEEEeccCCCccccccCC-------------------------------------------------------------
Q 003836          575 LLVYEFMSNGTVASFLFGD-------------------------------------------------------------  593 (792)
Q Consensus       575 ~lV~E~~~~gsL~~~l~~~-------------------------------------------------------------  593 (792)
                      ++||||+++|+|.+++...                                                             
T Consensus        88 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (338)
T cd05102          88 MVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLW  167 (338)
T ss_pred             EEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccc
Confidence            8999999999999888642                                                             


Q ss_pred             -CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc-cccccccCCccc
Q 003836          594 -SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT-NTAIRGTKGYVA  671 (792)
Q Consensus       594 -~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~a  671 (792)
                       ..+++..+.+++.||++||+|||+.   +|+||||||+|||+++++.+||+|||+++......... .....+++.|+|
T Consensus       168 ~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~a  244 (338)
T cd05102         168 KSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMA  244 (338)
T ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccC
Confidence             2366778889999999999999998   99999999999999999999999999998654332221 223346778999


Q ss_pred             ccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHH
Q 003836          672 PEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVM  750 (792)
Q Consensus       672 PE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  750 (792)
                      ||.+.+..++.++|||||||++|||++ |..||........   +    ......+         .....+...+..+.+
T Consensus       245 PE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~---~----~~~~~~~---------~~~~~~~~~~~~l~~  308 (338)
T cd05102         245 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE---F----CQRLKDG---------TRMRAPENATPEIYR  308 (338)
T ss_pred             cHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH---H----HHHHhcC---------CCCCCCCCCCHHHHH
Confidence            999999999999999999999999997 9999865322110   0    0000110         011112234567889


Q ss_pred             HHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          751 VAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       751 l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                      ++.+||+.+|++|||+.||+++|+.+++
T Consensus       309 li~~cl~~dp~~RPs~~el~~~l~~~~~  336 (338)
T cd05102         309 IMLACWQGDPKERPTFSALVEILGDLLQ  336 (338)
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            9999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4e-39  Score=342.51  Aligned_cols=244  Identities=25%  Similarity=0.363  Sum_probs=209.8

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCCCc
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTV  586 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~gsL  586 (792)
                      ++||+|+.|.||.+. +..+++.||||++........+-+.+|+.+|+..+|+|||.++..+..++++++|||||++|+|
T Consensus       279 ~kigqgaSG~vy~A~-~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsL  357 (550)
T KOG0578|consen  279 KKIGQGATGGVYVAR-KISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSL  357 (550)
T ss_pred             hhhccccccceeeee-eccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCch
Confidence            579999999999995 4566788999999887777888899999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccccccc
Q 003836          587 ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGT  666 (792)
Q Consensus       587 ~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt  666 (792)
                      .+.+.. ..+++.++..|++.+++||+|||.+   +|+|||||.+|||++.+|.+||+|||++..+..... .....+||
T Consensus       358 TDvVt~-~~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~-KR~TmVGT  432 (550)
T KOG0578|consen  358 TDVVTK-TRMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS-KRSTMVGT  432 (550)
T ss_pred             hhhhhc-ccccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccccccC-ccccccCC
Confidence            998854 4489999999999999999999999   999999999999999999999999999988765554 34456799


Q ss_pred             CCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhh-chhcccCCHHHH
Q 003836          667 KGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVE-NDLEAMNNVTML  745 (792)
Q Consensus       667 ~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  745 (792)
                      |.|||||+.....|+.|.||||||++++||+.|+.||-.+......                ..+.+ ....-..+...+
T Consensus       433 PYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAl----------------yLIa~ng~P~lk~~~klS  496 (550)
T KOG0578|consen  433 PYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL----------------YLIATNGTPKLKNPEKLS  496 (550)
T ss_pred             CCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHH----------------HHHhhcCCCCcCCccccC
Confidence            9999999999999999999999999999999999999754321110                00111 112222345677


Q ss_pred             HHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          746 HRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       746 ~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ..+.+++.+||+.|+++||++.|+|+.
T Consensus       497 ~~~kdFL~~cL~~dv~~RasA~eLL~H  523 (550)
T KOG0578|consen  497 PELKDFLDRCLVVDVEQRASAKELLEH  523 (550)
T ss_pred             HHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence            889999999999999999999999973

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-39  Score=375.22  Aligned_cols=254  Identities=27%  Similarity=0.411  Sum_probs=209.0

Q ss_pred             hhhhcCccccceEEEeeecCCCc----eEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSS----NHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~----~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +.+.||+|.||.||+|......+    ..||||.+++.. .+.+.+|.+|..+|+.++|||||+++|+|.+....+|++|
T Consensus       696 l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~le  775 (1025)
T KOG1095|consen  696 LLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLE  775 (1025)
T ss_pred             eeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEeh
Confidence            44579999999999998865443    359999998753 4566789999999999999999999999999999999999


Q ss_pred             eccCCCccccccCC-------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccc
Q 003836          580 FMSNGTVASFLFGD-------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLL  652 (792)
Q Consensus       580 ~~~~gsL~~~l~~~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~  652 (792)
                      ||++|+|..||++.       ..+.....+.++.|||+|+.||+++   ++|||||.++|+||++...+||+|||+|+..
T Consensus       776 yM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDFGlArDi  852 (1025)
T KOG1095|consen  776 YMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADFGLARDI  852 (1025)
T ss_pred             hcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEcccchhHhh
Confidence            99999999999865       3578889999999999999999999   9999999999999999999999999999954


Q ss_pred             cCCCCCccccc-cccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhH
Q 003836          653 TLDQSHTNTAI-RGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEA  730 (792)
Q Consensus       653 ~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  730 (792)
                      ...+....... .-...|||||.+..+.|+.|+|||||||+||||+| |..|+........                +..
T Consensus       853 y~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v----------------~~~  916 (1025)
T KOG1095|consen  853 YDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEV----------------LLD  916 (1025)
T ss_pred             hhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHH----------------HHH
Confidence            43333222211 23458999999999999999999999999999998 5566654322100                111


Q ss_pred             hhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          731 LVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       731 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                      ++... +...+..++..+.+||.+||+.+|++||++..|+++++.+..
T Consensus       917 ~~~gg-RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~  963 (1025)
T KOG1095|consen  917 VLEGG-RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISN  963 (1025)
T ss_pred             HHhCC-ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhh
Confidence            12222 455577788899999999999999999999999999877654

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-39  Score=337.95  Aligned_cols=265  Identities=23%  Similarity=0.300  Sum_probs=207.3

Q ss_pred             HHHhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccc-hHHHHHHHHHhcccC-CCCcccccceeccCC-ceEE
Q 003836          500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS-EKEFKAEVNGIGQTH-HKNLVRLLGYCDEGQ-NRLL  576 (792)
Q Consensus       500 ~~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~-~~~~~~Ei~~l~~l~-h~niv~l~g~~~~~~-~~~l  576 (792)
                      ..+|...++||.|+||.||+|+- ..++..||||++++....- +-.-.+|++.|++|+ ||||+++..++.+.+ .+++
T Consensus         9 m~RY~~i~klGDGTfGsV~la~~-~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f   87 (538)
T KOG0661|consen    9 MDRYTVIRKLGDGTFGSVYLAKS-KETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF   87 (538)
T ss_pred             HHHHHHHHHhcCCcceeEEEeee-cCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence            34566778999999999999975 4566789999998754432 233568999999998 999999999999888 9999


Q ss_pred             EEEeccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCC
Q 003836          577 VYEFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD  655 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~  655 (792)
                      |||||+. +|.+++.++ +.+++..+..|+.||++||+|+|.+   |++|||+||+|||+..+..+||+|||+||.... 
T Consensus        88 VfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S-  162 (538)
T KOG0661|consen   88 VFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREVRS-  162 (538)
T ss_pred             eHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccccccccccc-
Confidence            9999976 899999765 5789999999999999999999999   999999999999999999999999999997643 


Q ss_pred             CCCccccccccCCccccccc-ccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHH----HHhhccc-c--
Q 003836          656 QSHTNTAIRGTKGYVAPEWF-RNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWA----YDRYQER-T--  727 (792)
Q Consensus       656 ~~~~~~~~~gt~~y~aPE~~-~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~----~~~~~~~-~--  727 (792)
                       ....+..+.|..|+|||++ +.+-|+.+.|||++|||++||.+.+..|....+..+...+.+..    ...+.++ .  
T Consensus       163 -kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La  241 (538)
T KOG0661|consen  163 -KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLA  241 (538)
T ss_pred             -CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHH
Confidence             3344566789999999987 56789999999999999999999998886654432222111110    0111110 0  


Q ss_pred             ------hhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          728 ------LEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       728 ------~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                            .....-..+....+ ..+.++++++.+|+++||.+|||++|.+++
T Consensus       242 ~~mnf~~P~~~~~~l~~L~p-~~s~~~~~li~~ll~WDP~kRpTA~~al~~  291 (538)
T KOG0661|consen  242 SAMNFRFPQVKPSPLKDLLP-NASSEAASLIERLLAWDPDKRPTASQALQH  291 (538)
T ss_pred             HHhccCCCcCCCCChHHhCc-ccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence                  11111111111122 267889999999999999999999999985

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=1.1e-38  Score=307.87  Aligned_cols=274  Identities=22%  Similarity=0.283  Sum_probs=208.5

Q ss_pred             hhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      .++||+|.||.||+|.. ..+++.||||+++...  ........+||+.|+.++|+||+.++++|.+.+...||+|||+.
T Consensus         7 ~~~lGEG~~gvVyka~d-~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~t   85 (318)
T KOG0659|consen    7 LEKLGEGTYGVVYKARD-TETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMPT   85 (318)
T ss_pred             hhhhcCcceEEEEEEEe-cCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEeccc
Confidence            46799999999999974 4678899999997542  22345789999999999999999999999999999999999987


Q ss_pred             CCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          584 GTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       584 gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                       +|+..++++ ..++..++..++.++++||+|||++   .|+||||||.|+|++++|.+||+|||+|+.+....... +.
T Consensus        86 -dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~-~~  160 (318)
T KOG0659|consen   86 -DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQ-TH  160 (318)
T ss_pred             -cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCCCccc-cc
Confidence             899999876 4678999999999999999999999   99999999999999999999999999999886543332 22


Q ss_pred             ccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH----HHHhhcc-cchhHhhh---
Q 003836          663 IRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW----AYDRYQE-RTLEALVE---  733 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~---  733 (792)
                      .+-|.-|+|||.+.+ .+|+...||||.||++.||+-|..-|....+..+...+...    ..+.|.+ ..+.+..+   
T Consensus       161 ~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~  240 (318)
T KOG0659|consen  161 QVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQ  240 (318)
T ss_pred             ceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhc
Confidence            357899999998865 67999999999999999999887666544332221111110    0001110 00111111   


Q ss_pred             ---chhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCCCCCCCCCC
Q 003836          734 ---NDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPIPPCPWT  787 (792)
Q Consensus       734 ---~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~~~p~~P~~  787 (792)
                         +.+.. .-...+.++++++..++..||.+|++++|++++= -....|.|..|+-
T Consensus       241 ~P~~~~~~-lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~-yf~~~P~pt~~~~  295 (318)
T KOG0659|consen  241 FPKPPLNN-LFPAASSDALDLLSKMLTYNPKKRITASQALKHP-YFKSLPLPTPPSK  295 (318)
T ss_pred             CCCCcccc-ccccccHHHHHHHHhhhccCchhcccHHHHhcch-hhhcCCCCCChhh
Confidence               11111 2234567779999999999999999999998752 2334555555543

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=1e-38  Score=338.08  Aligned_cols=261  Identities=17%  Similarity=0.300  Sum_probs=207.6

Q ss_pred             CccccCHHHHHHHHhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccc---hHHHHHHHHHhcccCCCCccccc
Q 003836          489 NLRCFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL  565 (792)
Q Consensus       489 ~~~~~~~~el~~~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~---~~~~~~Ei~~l~~l~h~niv~l~  565 (792)
                      +++.++.+++...+   ...||+|+++.||+|+++   ++.||||+++......   .+.+.+|+.++.+++||||++++
T Consensus        11 ~~~~i~~~~i~~~~---~~~i~~g~~~~v~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~   84 (283)
T PHA02988         11 DIKCIESDDIDKYT---SVLIKENDQNSIYKGIFN---NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIY   84 (283)
T ss_pred             cceecCHHHcCCCC---CeEEeeCCceEEEEEEEC---CEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEe
Confidence            34555666653211   136999999999999873   5789999997654333   46788999999999999999999


Q ss_pred             ceecc----CCceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCe
Q 003836          566 GYCDE----GQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNA  641 (792)
Q Consensus       566 g~~~~----~~~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~  641 (792)
                      |++.+    ....++||||+++|+|.+++...+.+++....+++.|++.||.|||+.  .+++||||||+|||+++++.+
T Consensus        85 g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~~~~~~  162 (283)
T PHA02988         85 GFIIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVTENYKL  162 (283)
T ss_pred             eeEEecccCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEECCCCcE
Confidence            99876    356889999999999999998888899999999999999999999974  278899999999999999999


Q ss_pred             EEeecCCCccccCCCCCccccccccCCccccccccc--CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHH
Q 003836          642 RISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN--MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWA  719 (792)
Q Consensus       642 kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~  719 (792)
                      ||+|||+++......    ....++..|+|||++.+  ..++.++|||||||++|||++|+.||........   .    
T Consensus       163 kl~dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~---~----  231 (283)
T PHA02988        163 KIICHGLEKILSSPP----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEI---Y----  231 (283)
T ss_pred             EEcccchHhhhcccc----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHH---H----
Confidence            999999998654322    22357889999999976  6899999999999999999999999975432110   0    


Q ss_pred             HHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          720 YDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                               ..+.........+...+..+.+++.+||+.||++|||++|+++.|+.+.
T Consensus       232 ---------~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~  280 (283)
T PHA02988        232 ---------DLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK  280 (283)
T ss_pred             ---------HHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence                     0111111111222245667899999999999999999999999998653

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1e-38  Score=344.81  Aligned_cols=246  Identities=23%  Similarity=0.346  Sum_probs=204.9

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccc----cc-cchHHHHHHHHHhcccC-CCCcccccceeccCCceEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV----FQ-DSEKEFKAEVNGIGQTH-HKNLVRLLGYCDEGQNRLL  576 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~----~~-~~~~~~~~Ei~~l~~l~-h~niv~l~g~~~~~~~~~l  576 (792)
                      +.+.+.||+|+||+|++|... .+++.||+|++.+.    .. ...+.+.+|+.++++++ ||||++++.++....+.++
T Consensus        19 y~~~~~lG~GsfgkV~~a~~~-~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~i   97 (370)
T KOG0583|consen   19 YELGRTLGSGSFGKVKLAKHR-LTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIYI   97 (370)
T ss_pred             eeeeeeecCCCCeeEEEeeec-cCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEE
Confidence            445678999999999999654 45589999977653    12 34567789999999998 9999999999999999999


Q ss_pred             EEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC-CCeEEeecCCCccccCC
Q 003836          577 VYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH-YNARISDFGLAKLLTLD  655 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~-~~~kl~Dfg~a~~~~~~  655 (792)
                      ||||+.+|+|.+++.+..++.+....+++.|++.|++|+|+.   +|+||||||+|||++.+ +++||+|||++.... .
T Consensus        98 vmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~-~  173 (370)
T KOG0583|consen   98 VMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGLSAISP-G  173 (370)
T ss_pred             EEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEeccccccccC-C
Confidence            999999999999999888999999999999999999999999   99999999999999999 999999999999874 2


Q ss_pred             CCCccccccccCCcccccccccCC-CC-cccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhh
Q 003836          656 QSHTNTAIRGTKGYVAPEWFRNMP-IT-VKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVE  733 (792)
Q Consensus       656 ~~~~~~~~~gt~~y~aPE~~~~~~-~~-~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  733 (792)
                      ........+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||+.......   .     ..        +..
T Consensus       174 ~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l---~-----~k--------i~~  237 (370)
T KOG0583|consen  174 EDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNL---Y-----RK--------IRK  237 (370)
T ss_pred             CCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHH---H-----HH--------Hhc
Confidence            334455678999999999999877 86 789999999999999999999986321100   0     00        111


Q ss_pred             chhcccCCHHH-HHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          734 NDLEAMNNVTM-LHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       734 ~~~~~~~~~~~-~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ..  -.++... +.++..++.+||+.+|.+|+++.+|++
T Consensus       238 ~~--~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~  274 (370)
T KOG0583|consen  238 GE--FKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILE  274 (370)
T ss_pred             CC--ccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence            11  1122223 778899999999999999999999994

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=1.9e-38  Score=333.28  Aligned_cols=256  Identities=23%  Similarity=0.349  Sum_probs=205.0

Q ss_pred             HHhhhhhhcCccccceEEEeeecC--CCceEEEEEEcccccc-cchHHHHHHHHHhcccCCCCcccccceeccCCceEEE
Q 003836          501 VTRGFKEELGRGAFGTVYKGFVNM--GSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLV  577 (792)
Q Consensus       501 ~~~~~~~~lG~G~~g~Vy~g~~~~--~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV  577 (792)
                      ....+.+.||+|+||.||+|.+..  ..+..+|+|.++.... .....+.+|+.++++++||||+++++++...+..++|
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   84 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV   84 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence            345567889999999999997643  3356899999876432 3346789999999999999999999999999999999


Q ss_pred             EEeccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC
Q 003836          578 YEFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~  656 (792)
                      |||+++|+|.+++... ..+++..++.++.||+.||+|||+.   +++||||||+|||++.++.+|++|||.+.......
T Consensus        85 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~  161 (266)
T cd05064          85 TEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA  161 (266)
T ss_pred             EEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCcccccccccc
Confidence            9999999999999764 5689999999999999999999998   99999999999999999999999999876543222


Q ss_pred             CCccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          657 SHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       657 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                      ........++..|+|||.+.+..++.++|||||||++||+++ |+.||........   +     ..         +...
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~---~-----~~---------~~~~  224 (266)
T cd05064         162 IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDV---I-----KA---------VEDG  224 (266)
T ss_pred             hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHH---H-----HH---------HHCC
Confidence            111122335678999999999999999999999999999875 9999865432110   0     00         0111


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                      .....+...+..+.+++.+||+.+|++||++++|++.|+++
T Consensus       225 ~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         225 FRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             CCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence            11122334556788999999999999999999999999775

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-38  Score=326.62  Aligned_cols=258  Identities=23%  Similarity=0.315  Sum_probs=204.2

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      |.+.++||.|..++||+|... ..++.||||++.-.. ....+.+.+|+..+..++||||++++..|..+..+++||.||
T Consensus        28 YeL~e~IG~G~sa~V~~A~c~-p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfM  106 (516)
T KOG0582|consen   28 YELQEVIGVGASAVVYLARCI-PTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFM  106 (516)
T ss_pred             eeEEEEEeccceeEeeeeeec-ccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhh
Confidence            456688999999999999654 455899999987433 223688999999999999999999999999999999999999


Q ss_pred             cCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          582 SNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       582 ~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      .+||+.+.++..  ..+++..+..|.+++++||.|||++   |.||||||+.||||+++|.+||+|||.+..+.......
T Consensus       107 a~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~  183 (516)
T KOG0582|consen  107 AGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQ  183 (516)
T ss_pred             cCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeecccCcee
Confidence            999999999754  5689999999999999999999999   99999999999999999999999999877654332211


Q ss_pred             --c-ccccccCCccccccccc--CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhc
Q 003836          660 --N-TAIRGTKGYVAPEWFRN--MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEN  734 (792)
Q Consensus       660 --~-~~~~gt~~y~aPE~~~~--~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  734 (792)
                        . ....||+.|||||+++.  ..|+.|+||||||+...||.+|..||.......  .++.     .... ........
T Consensus       184 ~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmk--vLl~-----tLqn-~pp~~~t~  255 (516)
T KOG0582|consen  184 VTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMK--VLLL-----TLQN-DPPTLLTS  255 (516)
T ss_pred             eEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHH--HHHH-----HhcC-CCCCcccc
Confidence              1 34679999999999543  569999999999999999999999997654321  1110     0000 00000011


Q ss_pred             hhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          735 DLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       735 ~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .+...........+.+++..||+.||.+|||++++++.
T Consensus       256 ~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh  293 (516)
T KOG0582|consen  256 GLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH  293 (516)
T ss_pred             cCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence            11222223445678899999999999999999999863

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=3e-38  Score=347.92  Aligned_cols=256  Identities=26%  Similarity=0.392  Sum_probs=201.3

Q ss_pred             HhhhhhhcCccccceEEEeee----cCCCceEEEEEEccccc-ccchHHHHHHHHHhccc-CCCCcccccceeccCCceE
Q 003836          502 TRGFKEELGRGAFGTVYKGFV----NMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRL  575 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~----~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~  575 (792)
                      ...+.+.||+|+||.||++..    ..+++..||||+++... ....+.+.+|++++..+ +||||++++++|.+.+..+
T Consensus        36 ~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~  115 (375)
T cd05104          36 RLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTL  115 (375)
T ss_pred             HeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcce
Confidence            345678999999999999864    23445689999987533 23456788999999999 8999999999999999999


Q ss_pred             EEEEeccCCCccccccCCC-------------------------------------------------------------
Q 003836          576 LVYEFMSNGTVASFLFGDS-------------------------------------------------------------  594 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~~-------------------------------------------------------------  594 (792)
                      +||||+++|+|.+++....                                                             
T Consensus       116 lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (375)
T cd05104         116 VITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYI  195 (375)
T ss_pred             eeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceec
Confidence            9999999999998885321                                                             


Q ss_pred             --------------CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc-
Q 003836          595 --------------KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT-  659 (792)
Q Consensus       595 --------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~-  659 (792)
                                    .+++..+.+++.||++||+|||+.   +|+||||||+|||+++++.+||+|||+++......... 
T Consensus       196 ~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~  272 (375)
T cd05104         196 DQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVV  272 (375)
T ss_pred             ccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCcccccc
Confidence                          367788899999999999999998   99999999999999999999999999998664332211 


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      .....++..|+|||.+.+..++.++|||||||++|||++ |..||........   .             ...+......
T Consensus       273 ~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~---~-------------~~~~~~~~~~  336 (375)
T cd05104         273 KGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSK---F-------------YKMIKEGYRM  336 (375)
T ss_pred             cCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHH---H-------------HHHHHhCccC
Confidence            112335678999999999999999999999999999998 7888764322110   0             0011111111


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                      ..+...+.++.+++.+||+.||++||++.||+++|++.
T Consensus       337 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~  374 (375)
T cd05104         337 LSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence            11122345788999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=3.6e-39  Score=308.31  Aligned_cols=260  Identities=23%  Similarity=0.260  Sum_probs=211.6

Q ss_pred             HhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCC-----ceEE
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQ-----NRLL  576 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~-----~~~l  576 (792)
                      ++.+.+.||+|||+.||+++ ...+++.+|+|++.....+..+..++|++..++++|||+++++++...+.     +.||
T Consensus        22 Ryri~~~LgeGGfsfv~LV~-~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yl  100 (302)
T KOG2345|consen   22 RYRIQRLLGEGGFSFVDLVK-GLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYL  100 (302)
T ss_pred             eEEEeeeecCCCceeeeeec-ccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEE
Confidence            35567889999999999986 44566789999999887888899999999999999999999999985443     4899


Q ss_pred             EEEeccCCCccccccCC----CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccc
Q 003836          577 VYEFMSNGTVASFLFGD----SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLL  652 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~  652 (792)
                      +++|...|+|.+.+...    ..+++.+++.|+.+|++||++||+. .++++||||||.|||+.+.+.++|.|||.+...
T Consensus       101 l~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a  179 (302)
T KOG2345|consen  101 LLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSATQA  179 (302)
T ss_pred             EeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCcccc
Confidence            99999999999998653    4689999999999999999999998 235999999999999999999999999998765


Q ss_pred             cCCCCC--------ccccccccCCcccccccc---cCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHH
Q 003836          653 TLDQSH--------TNTAIRGTKGYVAPEWFR---NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYD  721 (792)
Q Consensus       653 ~~~~~~--------~~~~~~gt~~y~aPE~~~---~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~  721 (792)
                      ...-..        .-.....|..|+|||.+.   +..+++++|||||||+||+|+.|..||+...+.....        
T Consensus       180 ~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSl--------  251 (302)
T KOG2345|consen  180 PIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSL--------  251 (302)
T ss_pred             ceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeE--------
Confidence            422111        112335799999999985   4568999999999999999999999997654422211        


Q ss_pred             hhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          722 RYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       722 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                            ..++....+........++.+.+++.+||+.||.+||++.+++..++.++
T Consensus       252 ------aLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li  301 (302)
T KOG2345|consen  252 ------ALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI  301 (302)
T ss_pred             ------EEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence                  11222223333333347889999999999999999999999999998764

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=1.1e-38  Score=335.29  Aligned_cols=246  Identities=27%  Similarity=0.405  Sum_probs=210.9

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccc--cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ--DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      +.+.+.||+|.||.||||. .+++.+.||+|.+.+..+  ...+.+.+|++++++++|||||.++++|+...+.++|.||
T Consensus         4 yhv~e~iG~Gsfg~VYKgr-rK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~   82 (808)
T KOG0597|consen    4 YHVYEMIGEGSFGRVYKGR-RKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEY   82 (808)
T ss_pred             hhHHHHhcCCccceeeecc-cccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehh
Confidence            3455789999999999996 457788999999876433  3356789999999999999999999999999999999999


Q ss_pred             ccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          581 MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       581 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +.+ +|..+|..+..+++..+..|+.++..||.|||+.   +|+|||+||.||||+..+.+|++|||+|+.+.. .....
T Consensus        83 a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~-~t~vl  157 (808)
T KOG0597|consen   83 AVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMST-NTSVL  157 (808)
T ss_pred             hhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhccc-Cceee
Confidence            988 9999999999999999999999999999999999   999999999999999999999999999998764 33445


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      +.+.|||-|||||...+.+|+..+|.||+||++||+++|+.||....-.       .         -++.+......  .
T Consensus       158 tsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~-------~---------Lv~~I~~d~v~--~  219 (808)
T KOG0597|consen  158 TSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSIT-------Q---------LVKSILKDPVK--P  219 (808)
T ss_pred             eeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHH-------H---------HHHHHhcCCCC--C
Confidence            6678999999999999999999999999999999999999999643211       0         01112222222  2


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      +.+.+..+..++.-.|+.||..|.+-.+++..
T Consensus       220 p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H  251 (808)
T KOG0597|consen  220 PSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH  251 (808)
T ss_pred             cccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence            44778889999999999999999999998864

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=1.8e-38  Score=331.94  Aligned_cols=249  Identities=30%  Similarity=0.498  Sum_probs=195.9

Q ss_pred             hhhhcCccccceEEEeeec---CCCceEEEEEEcccccc-cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          505 FKEELGRGAFGTVYKGFVN---MGSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~---~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      +.+.||.|.||.||+|.+.   ...+..|+||.++.... ...+.+.+|++.+++++||||++++|++.+.+..++|+||
T Consensus         3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~   82 (259)
T PF07714_consen    3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY   82 (259)
T ss_dssp             EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred             EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence            3467999999999999887   23457899999965433 3468899999999999999999999999988889999999


Q ss_pred             ccCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC-
Q 003836          581 MSNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS-  657 (792)
Q Consensus       581 ~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~-  657 (792)
                      +++|+|.++|...  ..+++.++.+|+.||++||+|||+.   +++|+||+++|||+++++.+||+|||+++....... 
T Consensus        83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~  159 (259)
T PF07714_consen   83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY  159 (259)
T ss_dssp             -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE
T ss_pred             cccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccc
Confidence            9999999999876  6789999999999999999999998   999999999999999999999999999987632222 


Q ss_pred             CccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          658 HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       658 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                      ...........|+|||.+....++.++||||||+++|||++ |+.|+.......    +            ...+ ....
T Consensus       160 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~----~------------~~~~-~~~~  222 (259)
T PF07714_consen  160 KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEE----I------------IEKL-KQGQ  222 (259)
T ss_dssp             EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHH----H------------HHHH-HTTE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccc----c------------cccc-cccc
Confidence            22223446778999999999889999999999999999999 678875442110    0            0111 1111


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHh
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQML  773 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L  773 (792)
                      ....+...+..+.+++.+||+.+|++||++++|++.|
T Consensus       223 ~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  223 RLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             ETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             cceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence            2222334566788999999999999999999999976

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.1e-38  Score=337.20  Aligned_cols=242  Identities=24%  Similarity=0.317  Sum_probs=207.5

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +.+.||.|+-|.|-+|+. ..+++.+|||++.+..   ......+++||.+|+.+.|||+++++++..+..++|||.||+
T Consensus        16 LgkTLG~Gstg~vrlakh-~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv   94 (786)
T KOG0588|consen   16 LGKTLGKGSTGCVRLAKH-AETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYV   94 (786)
T ss_pred             ccccccCCCCceehhhhc-ccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEec
Confidence            457899999999999975 4678999999997652   223456899999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      ++|-|.++|..++.+.+....+++.||..|+.|+|..   +|+||||||+|+|||..+++||+|||+|.+-..  .....
T Consensus        95 ~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~--gklLe  169 (786)
T KOG0588|consen   95 PGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEVP--GKLLE  169 (786)
T ss_pred             CCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeecccC--Ccccc
Confidence            9999999999999999999999999999999999999   999999999999999999999999999986432  23344


Q ss_pred             cccccCCcccccccccCCCC-cccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhc--c
Q 003836          662 AIRGTKGYVAPEWFRNMPIT-VKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLE--A  738 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~~~-~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  738 (792)
                      +.+|+|.|.|||++++.+|+ .++||||.|||||.|+||+.||++..-                    ..++..-..  -
T Consensus       170 TSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNi--------------------r~LLlKV~~G~f  229 (786)
T KOG0588|consen  170 TSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNI--------------------RVLLLKVQRGVF  229 (786)
T ss_pred             ccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccH--------------------HHHHHHHHcCcc
Confidence            56899999999999999985 789999999999999999999984311                    111111111  1


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      +.+...+.++.+|+.+|+..||+.|.|++||++.
T Consensus       230 ~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH  263 (786)
T KOG0588|consen  230 EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH  263 (786)
T ss_pred             cCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence            2245567888999999999999999999999986

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=6.2e-38  Score=345.11  Aligned_cols=257  Identities=27%  Similarity=0.406  Sum_probs=201.6

Q ss_pred             HhhhhhhcCccccceEEEeeec----CCCceEEEEEEccccc-ccchHHHHHHHHHhccc-CCCCcccccceeccCCceE
Q 003836          502 TRGFKEELGRGAFGTVYKGFVN----MGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRL  575 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~----~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~  575 (792)
                      .+.+.+.||+|+||.||++...    ..+...||+|++.... ......+.+|+++++.+ +|+||++++++|.+....+
T Consensus        39 ~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~  118 (374)
T cd05106          39 NLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVL  118 (374)
T ss_pred             HceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeE
Confidence            3456788999999999998742    2234579999997543 33345788999999999 8999999999999999999


Q ss_pred             EEEEeccCCCccccccCC--------------------------------------------------------------
Q 003836          576 LVYEFMSNGTVASFLFGD--------------------------------------------------------------  593 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~--------------------------------------------------------------  593 (792)
                      +||||+++|+|.++++..                                                              
T Consensus       119 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (374)
T cd05106         119 VITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSK  198 (374)
T ss_pred             EeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccccc
Confidence            999999999999887532                                                              


Q ss_pred             --------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc-ccccc
Q 003836          594 --------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT-NTAIR  664 (792)
Q Consensus       594 --------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~  664 (792)
                              ..+++..+.+++.||+.||+|||+.   +|+||||||+|||+++++.+||+|||+++......... .....
T Consensus       199 ~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~  275 (374)
T cd05106         199 DEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNAR  275 (374)
T ss_pred             chhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCC
Confidence                    1357778899999999999999998   99999999999999999999999999998654332211 11233


Q ss_pred             ccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHH
Q 003836          665 GTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVT  743 (792)
Q Consensus       665 gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  743 (792)
                      ++..|+|||++.+..++.++|||||||++|||++ |+.||........                ....+........+..
T Consensus       276 ~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~----------------~~~~~~~~~~~~~~~~  339 (374)
T cd05106         276 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK----------------FYKMVKRGYQMSRPDF  339 (374)
T ss_pred             CccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH----------------HHHHHHcccCccCCCC
Confidence            5678999999998899999999999999999997 9999865422110                0011111111111222


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          744 MLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       744 ~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      .+.++.+++.+||+.+|++||++.+|+++|++++
T Consensus       340 ~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~  373 (374)
T cd05106         340 APPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL  373 (374)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence            3467889999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.5e-39  Score=329.38  Aligned_cols=245  Identities=24%  Similarity=0.349  Sum_probs=208.4

Q ss_pred             hhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCC
Q 003836          506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNG  584 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~g  584 (792)
                      .+.||+|.||.||||.. ..+++.||+|++.-.. .+..++++.|+.++..++++||.+++|.+..+..++++||||.+|
T Consensus        18 ~~~IgrGsfG~Vyk~~d-~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gG   96 (467)
T KOG0201|consen   18 LELIGRGSFGEVYKAID-NKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGG   96 (467)
T ss_pred             chhccccccceeeeeee-ccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCc
Confidence            36899999999999964 4667899999997543 445678999999999999999999999999999999999999999


Q ss_pred             CccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccccc
Q 003836          585 TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR  664 (792)
Q Consensus       585 sL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  664 (792)
                      ++.+.|.....+++..+.-|++++..||.|||.+   +.+|||||+.|||+..+|.+||+|||++-.+....... ..++
T Consensus        97 sv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr-~tfv  172 (467)
T KOG0201|consen   97 SVLDLLKSGNILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRR-KTFV  172 (467)
T ss_pred             chhhhhccCCCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeechhhcc-cccc
Confidence            9999998888788999999999999999999999   99999999999999999999999999998877655554 5677


Q ss_pred             ccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHH
Q 003836          665 GTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTM  744 (792)
Q Consensus       665 gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  744 (792)
                      ||+.|||||++....|+.|+||||||++.+||.+|..|+...........+                 -....+..+...
T Consensus       173 GTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflI-----------------pk~~PP~L~~~~  235 (467)
T KOG0201|consen  173 GTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLI-----------------PKSAPPRLDGDF  235 (467)
T ss_pred             ccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEec-----------------cCCCCCcccccc
Confidence            999999999999889999999999999999999999998765432111111                 111111122245


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          745 LHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       745 ~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      +..+.+++..||+.||+.||++.++++.
T Consensus       236 S~~~kEFV~~CL~k~P~~RpsA~~LLKh  263 (467)
T KOG0201|consen  236 SPPFKEFVEACLDKNPEFRPSAKELLKH  263 (467)
T ss_pred             CHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence            6678899999999999999999999863

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=1.3e-37  Score=336.35  Aligned_cols=243  Identities=23%  Similarity=0.274  Sum_probs=199.3

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      +.||+|+||.||++... .+++.+|+|++....   ......+.+|+.++++++||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~   79 (323)
T cd05571           1 KLLGKGTFGKVILVREK-ATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANG   79 (323)
T ss_pred             CeeeeCCCeEEEEEEEC-CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCC
Confidence            36999999999999754 456789999987532   23345678899999999999999999999999999999999999


Q ss_pred             CCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccccc
Q 003836          584 GTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAI  663 (792)
Q Consensus       584 gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  663 (792)
                      |+|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++..... .......
T Consensus        80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~-~~~~~~~  155 (323)
T cd05571          80 GELFFHLSRERVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD-GATMKTF  155 (323)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC-CCcccce
Confidence            99999998888899999999999999999999998   9999999999999999999999999999753222 1222345


Q ss_pred             cccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHH
Q 003836          664 RGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVT  743 (792)
Q Consensus       664 ~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  743 (792)
                      .||+.|+|||.+.+..++.++|||||||++|||++|+.||........   .             ..+....  ...+..
T Consensus       156 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~---~-------------~~~~~~~--~~~p~~  217 (323)
T cd05571         156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL---F-------------ELILMEE--IRFPRT  217 (323)
T ss_pred             ecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHH---H-------------HHHHcCC--CCCCCC
Confidence            699999999999999999999999999999999999999965422110   0             0000010  112233


Q ss_pred             HHHHHHHHHHHccccCCCCCC-----CHHhHHHH
Q 003836          744 MLHRFVMVAFWCIQEDPSHRP-----TMRKVTQM  772 (792)
Q Consensus       744 ~~~~l~~l~~~Cl~~~p~~RP-----s~~evl~~  772 (792)
                      ...++.+++.+||+.||++||     ++.++++.
T Consensus       218 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h  251 (323)
T cd05571         218 LSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH  251 (323)
T ss_pred             CCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence            456788999999999999999     78888763

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=2.2e-37  Score=328.91  Aligned_cols=264  Identities=19%  Similarity=0.216  Sum_probs=201.9

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .+.+.||+|+||.||++... .+++.+|+|++....  ....+.+.+|+.++++++|+||+++++++.+.+..++||||+
T Consensus         4 ~~~~~lg~g~~~~v~~~~~~-~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   82 (287)
T cd07848           4 EVLGVVGEGAYGVVLKCRHK-ETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYV   82 (287)
T ss_pred             eEEEEecccCCEEEEEEEEC-CCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecC
Confidence            45578999999999999754 456789999987532  233467889999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      +++.+..+......+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++...........
T Consensus        83 ~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~  159 (287)
T cd07848          83 EKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYT  159 (287)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccccccccccccc
Confidence            9987776655556788999999999999999999998   9999999999999999999999999999876543333334


Q ss_pred             cccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHH--------HHhhcccchhHhhh
Q 003836          662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWA--------YDRYQERTLEALVE  733 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~  733 (792)
                      ...|++.|+|||.+.+..++.++|||||||++|||++|+.||................        ..............
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (287)
T cd07848         160 EYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRF  239 (287)
T ss_pred             ccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhccccc
Confidence            4568999999999998889999999999999999999999997543221111110000        00000000000000


Q ss_pred             chh------cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          734 NDL------EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       734 ~~~------~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      +..      ........+..+.+++.+||+.||++|||++|+++
T Consensus       240 ~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         240 PAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             CcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            000      00011124567999999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-37  Score=321.08  Aligned_cols=254  Identities=23%  Similarity=0.303  Sum_probs=203.5

Q ss_pred             HhhhhhhcCccccceEEEeeecCCCceEEEEEEccccccc--------------chHHHHHHHHHhcccCCCCcccccce
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--------------SEKEFKAEVNGIGQTHHKNLVRLLGY  567 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~--------------~~~~~~~Ei~~l~~l~h~niv~l~g~  567 (792)
                      .+.+.++||+|.||.|-+|. +..+++.||||++.+....              ..+...+||.+|++++|+|||+|+.+
T Consensus        98 qy~l~~eiG~G~yGkVkLar-~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEv  176 (576)
T KOG0585|consen   98 QYELIKEIGSGQYGKVKLAR-DEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEV  176 (576)
T ss_pred             heehhhhhcCCccceEEEEe-ecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEe
Confidence            34556789999999999995 4566789999999753211              12478899999999999999999999


Q ss_pred             eccC--CceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEee
Q 003836          568 CDEG--QNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISD  645 (792)
Q Consensus       568 ~~~~--~~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~D  645 (792)
                      ..+.  +.+|||+|||..|.+...=.....+.+.+.+++++++..||+|||.+   +||||||||+|+||+++|++||+|
T Consensus       177 LDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g~VKIsD  253 (576)
T KOG0585|consen  177 LDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDGTVKISD  253 (576)
T ss_pred             ecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCCcEEeec
Confidence            9765  57999999999998877655444589999999999999999999999   999999999999999999999999


Q ss_pred             cCCCccccCCCCC----ccccccccCCcccccccccCC----CCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHH
Q 003836          646 FGLAKLLTLDQSH----TNTAIRGTKGYVAPEWFRNMP----ITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTD  717 (792)
Q Consensus       646 fg~a~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~----~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~  717 (792)
                      ||.+..+......    ......|||.|+|||...++.    .+.+.||||+||+||-|+.|+.||.......       
T Consensus       254 FGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~-------  326 (576)
T KOG0585|consen  254 FGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELE-------  326 (576)
T ss_pred             cceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHH-------
Confidence            9999876322111    122357999999999987632    3578999999999999999999997653321       


Q ss_pred             HHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhcc
Q 003836          718 WAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEG  775 (792)
Q Consensus       718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~  775 (792)
                               ....++...+.-...++..+++.+|+.++|+.||+.|.+..+|....--
T Consensus       327 ---------l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwv  375 (576)
T KOG0585|consen  327 ---------LFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWV  375 (576)
T ss_pred             ---------HHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheeccee
Confidence                     1123344444444444667889999999999999999999999886543

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=1.6e-37  Score=332.86  Aligned_cols=260  Identities=24%  Similarity=0.358  Sum_probs=198.6

Q ss_pred             hhhhhhcCccccceEEEeeecC---------------CCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNM---------------GSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLG  566 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~---------------~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g  566 (792)
                      +.+.++||+|+||.||++..+.               +.+..||+|.+.... .....++.+|++++.+++||||+++++
T Consensus         7 ~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~   86 (304)
T cd05096           7 LLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLG   86 (304)
T ss_pred             CeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEEE
Confidence            4456789999999999997532               234579999987543 334567999999999999999999999


Q ss_pred             eeccCCceEEEEEeccCCCccccccCC-------------------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecC
Q 003836          567 YCDEGQNRLLVYEFMSNGTVASFLFGD-------------------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCD  627 (792)
Q Consensus       567 ~~~~~~~~~lV~E~~~~gsL~~~l~~~-------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~d  627 (792)
                      ++.+.+..++||||+++|+|.+++...                   ..+++..+.+++.||+.||+|||+.   +|+|||
T Consensus        87 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~ivH~d  163 (304)
T cd05096          87 VCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFVHRD  163 (304)
T ss_pred             EEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---CccccC
Confidence            999999999999999999999988542                   1357788999999999999999998   999999


Q ss_pred             CCCCcEEEcCCCCeEEeecCCCccccCCCCC-ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh--cCcCCC
Q 003836          628 IKPQNILLDDHYNARISDFGLAKLLTLDQSH-TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC--LRRNID  704 (792)
Q Consensus       628 ikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t--g~~p~~  704 (792)
                      |||+|||+++++.+||+|||+++........ ......++..|+|||.+....++.++||||||+++|||++  +..||.
T Consensus       164 lkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~  243 (304)
T cd05096         164 LATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYG  243 (304)
T ss_pred             cchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCC
Confidence            9999999999999999999999865433221 1222345788999999988899999999999999999997  455665


Q ss_pred             cchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhcc
Q 003836          705 NEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEG  775 (792)
Q Consensus       705 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~  775 (792)
                      .......   + ............      ......+...+..+.+++.+||+.+|++|||++||.+.|++
T Consensus       244 ~~~~~~~---~-~~~~~~~~~~~~------~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~  304 (304)
T cd05096         244 ELTDEQV---I-ENAGEFFRDQGR------QVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE  304 (304)
T ss_pred             cCCHHHH---H-HHHHHHhhhccc------cccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence            4322111   0 000000000000      00011122345678999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.9e-38  Score=332.94  Aligned_cols=260  Identities=27%  Similarity=0.393  Sum_probs=220.1

Q ss_pred             HHHHHHHhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceE
Q 003836          496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRL  575 (792)
Q Consensus       496 ~el~~~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~  575 (792)
                      .|++......+++||-|-||.||.|.+..-+ ..||||.++.. ....++|+.|..+|+.++|||+|+|+|+|..+...|
T Consensus       262 WEmeRtdItMkhKLGGGQYGeVYeGvWKkys-lTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFY  339 (1157)
T KOG4278|consen  262 WEMERTDITMKHKLGGGQYGEVYEGVWKKYS-LTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFY  339 (1157)
T ss_pred             hhccchheeeeeccCCCcccceeeeeeeccc-eeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeE
Confidence            3444444445689999999999999997654 58999999864 345689999999999999999999999999999999


Q ss_pred             EEEEeccCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCcccc
Q 003836          576 LVYEFMSNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT  653 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~  653 (792)
                      ||.|||.+|+|.+||++-  ..++--..+.+|.||+.||.||..+   .+|||||.++|.|+.++..+|++|||+++++.
T Consensus       340 IiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLsRlMt  416 (1157)
T KOG4278|consen  340 IITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLSRLMT  416 (1157)
T ss_pred             EEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchhhhhc
Confidence            999999999999999764  4566777889999999999999999   99999999999999999999999999999998


Q ss_pred             CCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcC-cCCCcchhhhhhhhHHHHHHHhhcccchhHhh
Q 003836          654 LDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLR-RNIDNEISKVDKAILTDWAYDRYQERTLEALV  732 (792)
Q Consensus       654 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  732 (792)
                      .+.......-.-.+.|.|||.+....|+.|+|||+|||+||||.|-. .|+.. .+.                ..+-.++
T Consensus       417 gDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPG-idl----------------SqVY~LL  479 (1157)
T KOG4278|consen  417 GDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG-IDL----------------SQVYGLL  479 (1157)
T ss_pred             CCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCC-ccH----------------HHHHHHH
Confidence            77655444334467899999999999999999999999999999844 44432 111                1234566


Q ss_pred             hchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          733 ENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       733 ~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      +...+...+..+++.+++|++.||+++|.+||++.|+-+.+|.+.
T Consensus       480 EkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf  524 (1157)
T KOG4278|consen  480 EKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMF  524 (1157)
T ss_pred             hccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence            677777778889999999999999999999999999999886653

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-37  Score=330.64  Aligned_cols=243  Identities=22%  Similarity=0.232  Sum_probs=200.2

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      .+.+.||+|+||.||++... .+++.+|+|++....   ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus         4 ~~~~~lg~G~~g~Vy~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   82 (291)
T cd05612           4 ERIKTVGTGTFGRVHLVRDR-ISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEY   82 (291)
T ss_pred             eeeeeeecCCCeEEEEEEEc-CCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeC
Confidence            34578999999999999754 456789999986432   22345688999999999999999999999999999999999


Q ss_pred             ccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          581 MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       581 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +++|+|.+++.....+++.....++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++.....    .
T Consensus        83 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~----~  155 (291)
T cd05612          83 VPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR----T  155 (291)
T ss_pred             CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccCC----c
Confidence            99999999998888899999999999999999999998   9999999999999999999999999999865422    2


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ....|++.|+|||.+.+..++.++|||||||++|||++|+.||........   .             ..+....  ...
T Consensus       156 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~---~-------------~~i~~~~--~~~  217 (291)
T cd05612         156 WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGI---Y-------------EKILAGK--LEF  217 (291)
T ss_pred             ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---H-------------HHHHhCC--cCC
Confidence            234689999999999998999999999999999999999999975432110   0             0011111  111


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCC-----HHhHHHH
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRPT-----MRKVTQM  772 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RPs-----~~evl~~  772 (792)
                      +......+.+++.+||+.||.+||+     ++++++.
T Consensus       218 ~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h  254 (291)
T cd05612         218 PRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH  254 (291)
T ss_pred             CccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence            2233557889999999999999995     8888865

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=1.5e-37  Score=337.60  Aligned_cols=245  Identities=23%  Similarity=0.285  Sum_probs=202.1

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +.+.+.||+|+||.||+|.........+|+|++....   ....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus        32 y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~E  111 (340)
T PTZ00426         32 FNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLE  111 (340)
T ss_pred             cEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEe
Confidence            4556889999999999998665545689999986432   2334678899999999999999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      |+++|+|.+++.....+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++.....    
T Consensus       112 y~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~----  184 (340)
T PTZ00426        112 FVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR----  184 (340)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecCCC----
Confidence            999999999998888899999999999999999999998   9999999999999999999999999999865321    


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      .....||+.|+|||.+.+..++.++|||||||++|||++|+.||........        ...        +.....  .
T Consensus       185 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~--------~~~--------i~~~~~--~  246 (340)
T PTZ00426        185 TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLI--------YQK--------ILEGII--Y  246 (340)
T ss_pred             cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHH--------HHH--------HhcCCC--C
Confidence            2345689999999999988899999999999999999999999975432110        001        111100  1


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCC-----CHHhHHHH
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRP-----TMRKVTQM  772 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RP-----s~~evl~~  772 (792)
                      .+......+.+++.+||+.+|++|+     +++++++.
T Consensus       247 ~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h  284 (340)
T PTZ00426        247 FPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH  284 (340)
T ss_pred             CCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence            1223345678899999999999995     89988875

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-37  Score=303.38  Aligned_cols=233  Identities=26%  Similarity=0.303  Sum_probs=200.1

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccccccc---hHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~---~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +.+.||.|+||.|.+++.. .++..+|+|++++...-.   .+...+|..+|+.+.||.++++.+.|.+.+.++|||||+
T Consensus        48 ~~~tlGtGSFGrV~LVr~k-~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmeyv  126 (355)
T KOG0616|consen   48 RLKTLGTGSFGRVHLVREK-HSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEYV  126 (355)
T ss_pred             heeeeccCccceEEEEEEc-cCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEecc
Confidence            3568999999999999765 457899999998754333   345779999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      ++|.|..+|++.++++++..+-+|.||+.||+|||+.   +|++|||||+|||||.+|.+||.|||.|+....    ..-
T Consensus       127 ~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~----rT~  199 (355)
T KOG0616|consen  127 PGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG----RTW  199 (355)
T ss_pred             CCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecC----cEE
Confidence            9999999999999999999999999999999999999   999999999999999999999999999997643    245


Q ss_pred             cccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCC
Q 003836          662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN  741 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  741 (792)
                      +.+|||.|+|||+++...+..++|.|||||++|||+.|..||.......                ..+.++...+.  +|
T Consensus       200 TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~----------------iY~KI~~~~v~--fP  261 (355)
T KOG0616|consen  200 TLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQ----------------IYEKILEGKVK--FP  261 (355)
T ss_pred             EecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHH----------------HHHHHHhCccc--CC
Confidence            6889999999999999999999999999999999999999997643311                11222222222  34


Q ss_pred             HHHHHHHHHHHHHccccCCCCC
Q 003836          742 VTMLHRFVMVAFWCIQEDPSHR  763 (792)
Q Consensus       742 ~~~~~~l~~l~~~Cl~~~p~~R  763 (792)
                      .....++.+|+...|+.|-.+|
T Consensus       262 ~~fs~~~kdLl~~LL~vD~t~R  283 (355)
T KOG0616|consen  262 SYFSSDAKDLLKKLLQVDLTKR  283 (355)
T ss_pred             cccCHHHHHHHHHHHhhhhHhh
Confidence            5566778889999999999999

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=9e-38  Score=331.09  Aligned_cols=254  Identities=24%  Similarity=0.361  Sum_probs=218.7

Q ss_pred             hhhhhhcCccccceEEEeeecCC---CceEEEEEEccc-ccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMG---SSNHVAVKKLNS-VFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~---~~~~vavK~~~~-~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~  578 (792)
                      ..+.+.||+|-||.||+|.+...   ..-.||||.++. ...+..+.|..|..+|+.++||||++|+|+|.+. ..+|||
T Consensus       391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~Wivm  469 (974)
T KOG4257|consen  391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWIVM  469 (974)
T ss_pred             ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeEEE
Confidence            34567899999999999988543   345799999987 5566678899999999999999999999999764 679999


Q ss_pred             EeccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC
Q 003836          579 EFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       579 E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      |.++.|.|.+||..+ ..++......++.||+.||+|||++   +.|||||..+|||+....-+||+|||+++.+..+..
T Consensus       470 EL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~y  546 (974)
T KOG4257|consen  470 ELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAY  546 (974)
T ss_pred             ecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhhccccch
Confidence            999999999999876 4688899999999999999999999   999999999999999999999999999999887766


Q ss_pred             CccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          658 HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       658 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                      ...+...-.+.|||||.+.-.+|+.++|||-|||++|||+. |.+||....                 ..++...++..-
T Consensus       547 YkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvk-----------------NsDVI~~iEnGe  609 (974)
T KOG4257|consen  547 YKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVK-----------------NSDVIGHIENGE  609 (974)
T ss_pred             hhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccc-----------------ccceEEEecCCC
Confidence            66665556778999999999999999999999999999986 788986532                 223333455556


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      +...++.++..+..++.+||..+|.+||.+.|+...|+.++
T Consensus       610 RlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~  650 (974)
T KOG4257|consen  610 RLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVL  650 (974)
T ss_pred             CCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHH
Confidence            66778889999999999999999999999999998875544

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.7e-37  Score=321.60  Aligned_cols=254  Identities=26%  Similarity=0.419  Sum_probs=204.6

Q ss_pred             HHHhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       500 ~~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      .....+.+.||+|++|.||+|...  .++.||+|.++... ...+++.+|++++++++|+||+++++++...+..++|||
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~--~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWN--NTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTE   81 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEec--CCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeee
Confidence            344556789999999999999754  34679999987543 346789999999999999999999999999999999999


Q ss_pred             eccCCCccccccCCC--CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC
Q 003836          580 FMSNGTVASFLFGDS--KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      |+++++|.+++....  .+++..+..++.|++.||.|||+.   +|+|+||||+||++++++.+||+|||+++.......
T Consensus        82 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~  158 (261)
T cd05068          82 LMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY  158 (261)
T ss_pred             cccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc
Confidence            999999999997643  689999999999999999999998   999999999999999999999999999987653222


Q ss_pred             CccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          658 HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       658 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                      ........+..|+|||.+.+..++.++||||||++++||++ |+.||........   .     .         .+....
T Consensus       159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~---~-----~---------~~~~~~  221 (261)
T cd05068         159 EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEV---L-----Q---------QVDQGY  221 (261)
T ss_pred             cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHH---H-----H---------HHHcCC
Confidence            21222223458999999998899999999999999999999 8888865322100   0     0         011111


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                      ....+...+..+.+++.+|++.+|++||++.++++.|+.+
T Consensus       222 ~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~  261 (261)
T cd05068         222 RMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF  261 (261)
T ss_pred             CCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence            1112233456789999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=3.9e-37  Score=326.68  Aligned_cols=248  Identities=25%  Similarity=0.297  Sum_probs=198.5

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      ..+.||+|+||.||++... .+++.||+|++....   ......+.+|+.++.+++|+||+++++++.+.+..++||||+
T Consensus         4 ~~~~lg~G~~g~V~~~~~~-~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~   82 (285)
T cd05631           4 HYRVLGKGGFGEVCACQVR-ATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIM   82 (285)
T ss_pred             EEEEEecCCCEEEEEEEEe-cCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEec
Confidence            3467999999999999754 456799999986432   223456789999999999999999999999999999999999


Q ss_pred             cCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          582 SNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       582 ~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      ++|+|..++...  ..+++..+..++.|++.||+|||+.   +|+||||||+|||+++++.+||+|||+++......  .
T Consensus        83 ~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~--~  157 (285)
T cd05631          83 NGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE--T  157 (285)
T ss_pred             CCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC--e
Confidence            999999887543  4688999999999999999999998   99999999999999999999999999998753222  2


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      .....|++.|+|||.+.+..++.++|||||||++|||++|+.||.............    ..        +.  .....
T Consensus       158 ~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~----~~--------~~--~~~~~  223 (285)
T cd05631         158 VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVD----RR--------VK--EDQEE  223 (285)
T ss_pred             ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHH----HH--------hh--ccccc
Confidence            233468999999999999999999999999999999999999997543211100000    00        00  00111


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCC-----HHhHHHH
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPT-----MRKVTQM  772 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs-----~~evl~~  772 (792)
                      .+...+..+.+|+.+||+.||.+||+     ++++++.
T Consensus       224 ~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h  261 (285)
T cd05631         224 YSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH  261 (285)
T ss_pred             CCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence            23345667889999999999999997     7888863

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.2e-37  Score=331.62  Aligned_cols=241  Identities=22%  Similarity=0.262  Sum_probs=195.6

Q ss_pred             cCccccceEEEeeecCCCceEEEEEEcccc---cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCCC
Q 003836          509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSV---FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGT  585 (792)
Q Consensus       509 lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~gs  585 (792)
                      ||+|+||.||++... .+++.+|+|++...   .......+.+|+.++++++||||+++++++.+.+..++||||+++|+
T Consensus         1 lg~G~~g~Vy~~~~~-~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~   79 (312)
T cd05585           1 IGKGSFGKVMQVRKR-DTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGE   79 (312)
T ss_pred             CCcCCCeEEEEEEEC-CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCc
Confidence            799999999999754 45678999998653   23345678899999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccccccc
Q 003836          586 VASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRG  665 (792)
Q Consensus       586 L~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~g  665 (792)
                      |.+++.....+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++...... .......|
T Consensus        80 L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~g  155 (312)
T cd05585          80 LFHHLQREGRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD-DKTNTFCG  155 (312)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCC-CccccccC
Confidence            999998878899999999999999999999998   99999999999999999999999999998643222 22234568


Q ss_pred             cCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHH
Q 003836          666 TKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTML  745 (792)
Q Consensus       666 t~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  745 (792)
                      |+.|+|||.+.+..++.++|||||||++|||++|+.||........       .         ..+....  ...+....
T Consensus       156 t~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~-------~---------~~~~~~~--~~~~~~~~  217 (312)
T cd05585         156 TPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEM-------Y---------RKILQEP--LRFPDGFD  217 (312)
T ss_pred             CcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHH-------H---------HHHHcCC--CCCCCcCC
Confidence            9999999999999999999999999999999999999965422100       0         0011111  11223345


Q ss_pred             HHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          746 HRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       746 ~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ..+.+++.+||+.||.+||++..+.+.
T Consensus       218 ~~~~~li~~~L~~dp~~R~~~~~~~e~  244 (312)
T cd05585         218 RDAKDLLIGLLSRDPTRRLGYNGAQEI  244 (312)
T ss_pred             HHHHHHHHHHcCCCHHHcCCCCCHHHH
Confidence            678899999999999999865443333

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=5e-37  Score=321.81  Aligned_cols=252  Identities=27%  Similarity=0.397  Sum_probs=203.9

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      ..+.+.||+|++|.||+|... ..++.+|+|++... ....+++.+|++++++++|+||+++++++...+..++||||++
T Consensus         8 ~~~~~~ig~g~~~~v~~~~~~-~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (263)
T cd05052           8 ITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT   85 (263)
T ss_pred             eEEeeecCCcccceEEEEEEe-cCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC
Confidence            345678999999999999765 34678999998753 3345689999999999999999999999999999999999999


Q ss_pred             CCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          583 NGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       583 ~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +++|.+++...  ..+++..++.++.|+++||+|||+.   +++|+||||+|||+++++.+||+|||+++..........
T Consensus        86 ~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~  162 (263)
T cd05052          86 YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH  162 (263)
T ss_pred             CCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccccccceeecc
Confidence            99999998653  4578999999999999999999998   999999999999999999999999999987654322222


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      ....++..|+|||.+.+..++.++||||||+++|||++ |..|+........        ...         +.......
T Consensus       163 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~--------~~~---------~~~~~~~~  225 (263)
T cd05052         163 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV--------YEL---------LEKGYRME  225 (263)
T ss_pred             CCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH--------HHH---------HHCCCCCC
Confidence            22234668999999998999999999999999999998 8888864322110        000         11111112


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                      .+...+..+.+++.+||+.+|++||++.+++++|+.+
T Consensus       226 ~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         226 RPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence            2233456788999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=100.00  E-value=1.5e-36  Score=375.43  Aligned_cols=269  Identities=26%  Similarity=0.489  Sum_probs=211.6

Q ss_pred             cCHHHHHHHHhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCC
Q 003836          493 FTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQ  572 (792)
Q Consensus       493 ~~~~el~~~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~  572 (792)
                      ++++++.... ...+.||+|+||.||+|... .+++.||||++.....    ...+|++.+++++|||||+++++|.+.+
T Consensus       683 ~~~~~~~~~~-~~~~~ig~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~~~  756 (968)
T PLN00113        683 ITINDILSSL-KEENVISRGKKGASYKGKSI-KNGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRSEK  756 (968)
T ss_pred             hhHHHHHhhC-CcccEEccCCCeeEEEEEEC-CCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEcCC
Confidence            4444444321 22357999999999999763 3467899999875432    2235688999999999999999999999


Q ss_pred             ceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccc
Q 003836          573 NRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLL  652 (792)
Q Consensus       573 ~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~  652 (792)
                      ..++||||+++|+|.++++   .++|..+.+|+.||++||+|||+.+..+|+||||||+||+++.++.+++. |+.+...
T Consensus       757 ~~~lv~Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~  832 (968)
T PLN00113        757 GAYLIHEYIEGKNLSEVLR---NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLL  832 (968)
T ss_pred             CCEEEEeCCCCCcHHHHHh---cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccc
Confidence            9999999999999999995   38899999999999999999997777799999999999999999998886 6665433


Q ss_pred             cCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhh
Q 003836          653 TLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALV  732 (792)
Q Consensus       653 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  732 (792)
                      ...     ....+++.|+|||++.+..++.|+|||||||++|||+||+.|++.....  ......|.............+
T Consensus       833 ~~~-----~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  905 (968)
T PLN00113        833 CTD-----TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGV--HGSIVEWARYCYSDCHLDMWI  905 (968)
T ss_pred             ccC-----CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCC--CCcHHHHHHHhcCccchhhee
Confidence            211     1235789999999999999999999999999999999999999644322  122334444444344444555


Q ss_pred             hchhcc--cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          733 ENDLEA--MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       733 ~~~~~~--~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                      ++.+..  ..+.++..++.+++.+||+.+|++||+|+||+++|+++..
T Consensus       906 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~  953 (968)
T PLN00113        906 DPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR  953 (968)
T ss_pred             CccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence            554433  2345677789999999999999999999999999998765

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=5.3e-37  Score=318.12  Aligned_cols=269  Identities=26%  Similarity=0.369  Sum_probs=201.4

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcc--cCCCCcccccceeccCC----ceEEEE
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQ--THHKNLVRLLGYCDEGQ----NRLLVY  578 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~--l~h~niv~l~g~~~~~~----~~~lV~  578 (792)
                      +.+.||+|+||.||||.++   ++.||||++..   +..+.|++|-++++.  ++|+||+++++.-..+.    +++||+
T Consensus       214 l~eli~~Grfg~V~KaqL~---~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt  287 (534)
T KOG3653|consen  214 LLELIGRGRFGCVWKAQLD---NRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVT  287 (534)
T ss_pred             hHHHhhcCccceeehhhcc---CceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEe
Confidence            4578999999999999886   37899999863   445678888887775  68999999999887665    889999


Q ss_pred             EeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhcc------CCCeEecCCCCCcEEEcCCCCeEEeecCCCccc
Q 003836          579 EFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEEC------CTQIIHCDIKPQNILLDDHYNARISDFGLAKLL  652 (792)
Q Consensus       579 E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~  652 (792)
                      ||.++|+|.+||.. ..++|....+|+..+++||+|||+..      +++|+|||||.+|||+.+|+++.|+|||+|..+
T Consensus       288 ~fh~kGsL~dyL~~-ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~  366 (534)
T KOG3653|consen  288 EFHPKGSLCDYLKA-NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRL  366 (534)
T ss_pred             eeccCCcHHHHHHh-ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEe
Confidence            99999999999965 45799999999999999999999874      357999999999999999999999999999998


Q ss_pred             cCCCCCc-cccccccCCcccccccccC-CCC-----cccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcc
Q 003836          653 TLDQSHT-NTAIRGTKGYVAPEWFRNM-PIT-----VKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQE  725 (792)
Q Consensus       653 ~~~~~~~-~~~~~gt~~y~aPE~~~~~-~~~-----~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~  725 (792)
                      ....... ....+||.+|||||++.+. .+.     .+.||||+|.+||||++.-.-++....+..+..+..-.-.+-.-
T Consensus       367 ~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~  446 (534)
T KOG3653|consen  367 EPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTL  446 (534)
T ss_pred             cCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCH
Confidence            7654433 3347899999999999764 233     46999999999999999765443211111100000000000000


Q ss_pred             cchhHh-hhchhcccCCH-----HHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCCC
Q 003836          726 RTLEAL-VENDLEAMNNV-----TMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP  780 (792)
Q Consensus       726 ~~~~~~-~~~~~~~~~~~-----~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~~  780 (792)
                      +.++++ +....++..+.     ..+..+.+.+..||..||+.|.|+.=|.+++.++..+.
T Consensus       447 e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~  507 (534)
T KOG3653|consen  447 EEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLW  507 (534)
T ss_pred             HHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccC
Confidence            111111 22222222221     34677899999999999999999998888887765544

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=3.4e-37  Score=334.28  Aligned_cols=264  Identities=22%  Similarity=0.306  Sum_probs=203.2

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +...+.||+|+||.||++... .++..+|+|.+.... ....+.+.+|++++++++|+||+++++++..++..++||||+
T Consensus         7 y~~~~~lg~G~~g~V~~~~~~-~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   85 (331)
T cd06649           7 FERISELGAGNGGVVTKVQHK-PSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM   85 (331)
T ss_pred             ceEEEeecCCCCEEEEEEEEC-CCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecC
Confidence            334578999999999999754 456789999987542 233567999999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      ++++|.+++.....+++..+..++.|++.||.|||++  .+|+||||||+|||++.++.+||+|||+++.....   ...
T Consensus        86 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~  160 (331)
T cd06649          86 DGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MAN  160 (331)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEccCccccccccc---ccc
Confidence            9999999998877889999999999999999999985  26999999999999999999999999999765322   123


Q ss_pred             cccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHH--------------------
Q 003836          662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYD--------------------  721 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~--------------------  721 (792)
                      ...|++.|+|||.+.+..++.++|||||||++|||++|+.||...........+......                    
T Consensus       161 ~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (331)
T cd06649         161 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPV  240 (331)
T ss_pred             cCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccc
Confidence            346899999999999999999999999999999999999999643221110000000000                    


Q ss_pred             ------hhcccchhHhhh----chhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          722 ------RYQERTLEALVE----NDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       722 ------~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                            .........+.+    .............++.+++.+||+.||++|||++|+++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h  301 (331)
T cd06649         241 SGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH  301 (331)
T ss_pred             cccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence                  000000001111    111111112356789999999999999999999999875

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=5.8e-37  Score=331.82  Aligned_cols=243  Identities=24%  Similarity=0.277  Sum_probs=198.9

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      +.||+|+||.||++.. ..+++.+|+|++.+..   ......+.+|++++++++||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~-~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~   79 (328)
T cd05593           1 KLLGKGTFGKVILVRE-KASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNG   79 (328)
T ss_pred             CeeeeCCCEEEEEEEE-CCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCC
Confidence            3689999999999965 3556899999987532   23446788999999999999999999999999999999999999


Q ss_pred             CCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccccc
Q 003836          584 GTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAI  663 (792)
Q Consensus       584 gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  663 (792)
                      |+|..++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++...... ......
T Consensus        80 g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~-~~~~~~  155 (328)
T cd05593          80 GELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA-ATMKTF  155 (328)
T ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCcc-cccccc
Confidence            99999998878899999999999999999999998   99999999999999999999999999987543221 122345


Q ss_pred             cccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHH
Q 003836          664 RGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVT  743 (792)
Q Consensus       664 ~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  743 (792)
                      .||+.|+|||.+.+..++.++|||||||++|||++|+.||........   .             ..+...  ....+..
T Consensus       156 ~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~---~-------------~~~~~~--~~~~p~~  217 (328)
T cd05593         156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL---F-------------ELILME--DIKFPRT  217 (328)
T ss_pred             cCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHH---H-------------HHhccC--CccCCCC
Confidence            689999999999998999999999999999999999999965322110   0             000000  0111223


Q ss_pred             HHHHHHHHHHHccccCCCCCC-----CHHhHHHH
Q 003836          744 MLHRFVMVAFWCIQEDPSHRP-----TMRKVTQM  772 (792)
Q Consensus       744 ~~~~l~~l~~~Cl~~~p~~RP-----s~~evl~~  772 (792)
                      .+.++.+++.+||+.||++||     ++.|+++.
T Consensus       218 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  251 (328)
T cd05593         218 LSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH  251 (328)
T ss_pred             CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence            456788999999999999997     88888864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.7e-37  Score=334.46  Aligned_cols=251  Identities=20%  Similarity=0.295  Sum_probs=202.8

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      .+.+.||+|+||.||+|... .+++.||+|++....   ....+.+.+|++++.+++||||+++++++.+.+..++||||
T Consensus         4 ~~~~~ig~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   82 (333)
T cd05600           4 QILTQVGQGGYGQVFLAKKK-DTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEY   82 (333)
T ss_pred             EEEEEEeecCCeEEEEEEEC-CCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeC
Confidence            34578999999999999754 456789999987532   23345788999999999999999999999999999999999


Q ss_pred             ccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          581 MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       581 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +++|+|.+++.....+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++....    ..
T Consensus        83 ~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~----~~  155 (333)
T cd05600          83 VPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT----YA  155 (333)
T ss_pred             CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc----cc
Confidence            99999999998878889999999999999999999998   999999999999999999999999999986543    22


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ....||+.|+|||.+.+..++.++|||||||++|||++|+.||...........+..+     .     ..+........
T Consensus       156 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~-----~-----~~~~~~~~~~~  225 (333)
T cd05600         156 NSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYW-----K-----ETLQRPVYDDP  225 (333)
T ss_pred             CCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhc-----c-----ccccCCCCCcc
Confidence            3456899999999999999999999999999999999999999754322111111000     0     00000000000


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ....+.++.+++.+||+.+|.+||+++++++.
T Consensus       226 ~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         226 RFNLSDEAWDLITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             ccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence            12345678899999999999999999999975

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=3.5e-37  Score=333.73  Aligned_cols=244  Identities=23%  Similarity=0.279  Sum_probs=200.0

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +.+.+.||+|+||.||++... .+++.+|+|++....   ....+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus        20 y~~~~~lg~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   98 (329)
T PTZ00263         20 FEMGETLGTGSFGRVRIAKHK-GTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLE   98 (329)
T ss_pred             eEEEEEEEecCCeEEEEEEEC-CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEc
Confidence            345678999999999999764 456789999986532   2234578899999999999999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      |+++|+|.+++.....+++.....++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++.....    
T Consensus        99 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~----  171 (329)
T PTZ00263         99 FVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR----  171 (329)
T ss_pred             CCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCCC----
Confidence            999999999998888889999999999999999999998   9999999999999999999999999999865322    


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      .....||+.|+|||.+.+..++.++|||||||++|||++|+.||........        ..        .+.....  .
T Consensus       172 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~--------~~--------~i~~~~~--~  233 (329)
T PTZ00263        172 TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRI--------YE--------KILAGRL--K  233 (329)
T ss_pred             cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHH--------HH--------HHhcCCc--C
Confidence            1234689999999999999999999999999999999999999965422100        00        1111111  1


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCC-----HHhHHHH
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPT-----MRKVTQM  772 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs-----~~evl~~  772 (792)
                      .+.....++.+++.+||+.||.+||+     +++++..
T Consensus       234 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h  271 (329)
T PTZ00263        234 FPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH  271 (329)
T ss_pred             CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence            12223456789999999999999997     6777754

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=7.7e-37  Score=323.99  Aligned_cols=253  Identities=27%  Similarity=0.418  Sum_probs=203.7

Q ss_pred             hhhhhhcCccccceEEEeeecCC----CceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMG----SSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLV  577 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~----~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV  577 (792)
                      ..+.+.||+|+||.||+|.....    ....+++|.+.... ......+.+|+.++.+++||||+++++++......+++
T Consensus         7 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~   86 (283)
T cd05048           7 VRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCML   86 (283)
T ss_pred             cchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEE
Confidence            34567899999999999976432    22579999987543 23346789999999999999999999999999999999


Q ss_pred             EEeccCCCccccccCC----------------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCe
Q 003836          578 YEFMSNGTVASFLFGD----------------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNA  641 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~  641 (792)
                      |||+++++|.+++...                ..+++..+..++.|++.||+|||+.   +++|+||||+||++++++.+
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~~~~  163 (283)
T cd05048          87 FEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEGLTV  163 (283)
T ss_pred             EecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCCCcE
Confidence            9999999999998653                3467888999999999999999998   99999999999999999999


Q ss_pred             EEeecCCCccccCCCC-CccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHH
Q 003836          642 RISDFGLAKLLTLDQS-HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWA  719 (792)
Q Consensus       642 kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~  719 (792)
                      ||+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |..||........        
T Consensus       164 ~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~--------  235 (283)
T cd05048         164 KISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEV--------  235 (283)
T ss_pred             EECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHH--------
Confidence            9999999986543222 12223346788999999998899999999999999999998 9999865432110        


Q ss_pred             HHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhcc
Q 003836          720 YDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEG  775 (792)
Q Consensus       720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~  775 (792)
                               ...+........+...+.++.+++.+||+.+|++||+++||+++|++
T Consensus       236 ---------~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         236 ---------IEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             ---------HHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence                     01111111122234556789999999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=2.9e-37  Score=312.41  Aligned_cols=248  Identities=21%  Similarity=0.369  Sum_probs=209.4

Q ss_pred             HHHhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccc---cchHHHHHHHHHhcccCCCCcccccceeccCCceEE
Q 003836          500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ---DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLL  576 (792)
Q Consensus       500 ~~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~l  576 (792)
                      +.++.|.+.||+|.||.|-++.. ...++.||||.+++...   +..-.+.+||++|..|+||||+.++.+|+..+...|
T Consensus        52 kHRyE~~etLGkGTYGKVk~A~e-~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvi  130 (668)
T KOG0611|consen   52 KHRYEITETLGKGTYGKVKLAYE-HKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVI  130 (668)
T ss_pred             hhHHHHHHHhcCCcccceeehhh-ccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEE
Confidence            34567889999999999999964 35678999999876433   334568899999999999999999999999999999


Q ss_pred             EEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC
Q 003836          577 VYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~  656 (792)
                      ||||..+|.|.+|+...+.+++.....+++||..|+.|+|..   +++|||||.+|||||.|+++||+|||++-.+..+ 
T Consensus       131 vMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~~~-  206 (668)
T KOG0611|consen  131 VMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYADK-  206 (668)
T ss_pred             EEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhccc-
Confidence            999999999999999999999999999999999999999999   9999999999999999999999999999876533 


Q ss_pred             CCccccccccCCcccccccccCCCC-cccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          657 SHTNTAIRGTKGYVAPEWFRNMPIT-VKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       657 ~~~~~~~~gt~~y~aPE~~~~~~~~-~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                       .-..+++|++-|.+||++.+.+|. +..|-|||||+||.|+.|..||+......   ..             .++....
T Consensus       207 -kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~---lv-------------rQIs~Ga  269 (668)
T KOG0611|consen  207 -KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKR---LV-------------RQISRGA  269 (668)
T ss_pred             -cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHH---HH-------------HHhhccc
Confidence             334568899999999999999885 78999999999999999999998754321   11             1111111


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ..   .++.+....-||+|||-.||+.|.|+++|...
T Consensus       270 Yr---EP~~PSdA~gLIRwmLmVNP~RRATieDiAsH  303 (668)
T KOG0611|consen  270 YR---EPETPSDASGLIRWMLMVNPERRATIEDIASH  303 (668)
T ss_pred             cc---CCCCCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence            11   22344566779999999999999999999875

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=8.4e-37  Score=337.55  Aligned_cols=257  Identities=23%  Similarity=0.355  Sum_probs=201.9

Q ss_pred             hhhhhhcCccccceEEEeeecC----CCceEEEEEEccccccc-chHHHHHHHHHhcccC-CCCcccccceeccCCceEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNM----GSSNHVAVKKLNSVFQD-SEKEFKAEVNGIGQTH-HKNLVRLLGYCDEGQNRLL  576 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~----~~~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~-h~niv~l~g~~~~~~~~~l  576 (792)
                      ..+.+.||+|+||.||+|+...    .....||||++...... ..+.+.+|+++++++. ||||++++++|.+....+|
T Consensus        39 ~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~l  118 (400)
T cd05105          39 LVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYI  118 (400)
T ss_pred             eehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEE
Confidence            3456789999999999997532    22347999999754332 3457999999999996 9999999999999999999


Q ss_pred             EEEeccCCCccccccCC---------------------------------------------------------------
Q 003836          577 VYEFMSNGTVASFLFGD---------------------------------------------------------------  593 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~---------------------------------------------------------------  593 (792)
                      ||||+++|+|.++|+..                                                               
T Consensus       119 v~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (400)
T cd05105         119 ITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEAS  198 (400)
T ss_pred             EEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhh
Confidence            99999999999887532                                                               


Q ss_pred             ---------------------------------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCC
Q 003836          594 ---------------------------------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYN  640 (792)
Q Consensus       594 ---------------------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~  640 (792)
                                                       ..+++..+.+++.||++||+|||+.   +|+|+||||+|||+++++.
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill~~~~~  275 (400)
T cd05105         199 KYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLLAQGKI  275 (400)
T ss_pred             hhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEEeCCCE
Confidence                                             1356777889999999999999998   9999999999999999999


Q ss_pred             eEEeecCCCccccCCCCC-ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHH
Q 003836          641 ARISDFGLAKLLTLDQSH-TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDW  718 (792)
Q Consensus       641 ~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~  718 (792)
                      +||+|||+++........ ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||.........      
T Consensus       276 ~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~------  349 (400)
T cd05105         276 VKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTF------  349 (400)
T ss_pred             EEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHH------
Confidence            999999999865433222 1222346788999999998899999999999999999997 88888654221110      


Q ss_pred             HHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          719 AYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                       ...         +........+...+.++.+++.+||+.+|++||++.+|.++|+.+.+
T Consensus       350 -~~~---------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~  399 (400)
T cd05105         350 -YNK---------IKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP  399 (400)
T ss_pred             -HHH---------HhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence             000         01111111223445678999999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=6.6e-37  Score=322.99  Aligned_cols=265  Identities=20%  Similarity=0.283  Sum_probs=213.5

Q ss_pred             hhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      .++||+|+||.||+++- ..++..+|+|++++..   ....+.++.|-.+|...+++.||+|+-.|.+.+.+||||||++
T Consensus       146 Lk~IgkGAfGeVrLarK-k~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylP  224 (550)
T KOG0605|consen  146 LKVIGKGAFGEVRLARK-KDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLP  224 (550)
T ss_pred             heeeccccceeEEEEEE-ccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecC
Confidence            36799999999999964 5678899999998753   3345678899999999999999999999999999999999999


Q ss_pred             CCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCC-------
Q 003836          583 NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD-------  655 (792)
Q Consensus       583 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~-------  655 (792)
                      ||++..+|.....+++......+.+++-||..||+.   |||||||||+|+|||..|++||+|||++.-+...       
T Consensus       225 GGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~  301 (550)
T KOG0605|consen  225 GGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYR  301 (550)
T ss_pred             CccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhc
Confidence            999999999999999999999999999999999999   9999999999999999999999999999643210       


Q ss_pred             ---------------CCC-----c-------------------cccccccCCcccccccccCCCCcccceehHHHHHHHH
Q 003836          656 ---------------QSH-----T-------------------NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEI  696 (792)
Q Consensus       656 ---------------~~~-----~-------------------~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el  696 (792)
                                     ...     .                   ....+|||-|||||++.+..|+..+|.||||||+|||
T Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEm  381 (550)
T KOG0605|consen  302 LDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEM  381 (550)
T ss_pred             chhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHH
Confidence                           000     0                   0123599999999999999999999999999999999


Q ss_pred             HhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCC---HHhHHHHh
Q 003836          697 ICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPT---MRKVTQML  773 (792)
Q Consensus       697 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs---~~evl~~L  773 (792)
                      +.|-+||..+.....-..+..|-..              +........+.+..+||.+|+. ||++|.-   ++||.++-
T Consensus       382 LvGyPPF~s~tp~~T~rkI~nwr~~--------------l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HP  446 (550)
T KOG0605|consen  382 LVGYPPFCSETPQETYRKIVNWRET--------------LKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHP  446 (550)
T ss_pred             HhCCCCCCCCCHHHHHHHHHHHhhh--------------ccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCC
Confidence            9999999887655443334333211              1111222344788899999999 9999974   67776642


Q ss_pred             -------ccCcCCCCCCCCCCCC
Q 003836          774 -------EGVVEVPIPPCPWTLN  789 (792)
Q Consensus       774 -------~~~~~~~~p~~P~~~~  789 (792)
                             +.+.+.+.|=.|-..+
T Consensus       447 fF~~v~W~~l~~~~apfvP~v~~  469 (550)
T KOG0605|consen  447 FFKGVDWDHLREMPAPFVPQVNS  469 (550)
T ss_pred             ccccCCcchhhcCCCCCCCCCCC
Confidence                   4556666555555443

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=1.1e-36  Score=317.85  Aligned_cols=248  Identities=25%  Similarity=0.400  Sum_probs=199.2

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      .+.+.||+|+||.||++...  .+..+|+|.+... .....++.+|+.++++++||||+++++++.+.+..++||||+++
T Consensus         7 ~~~~~lg~G~~~~vy~~~~~--~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~   83 (256)
T cd05114           7 TFMKELGSGQFGVVHLGKWR--AQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMEN   83 (256)
T ss_pred             EEeeEecCCcCceEEEEEec--cCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCC
Confidence            34578999999999999764  3457999988643 33457899999999999999999999999999999999999999


Q ss_pred             CCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          584 GTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       584 gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      |+|.+++... ..+++..+..++.|++.||+|||+.   +|+|+||||+||++++++.+||+|||.++............
T Consensus        84 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~  160 (256)
T cd05114          84 GCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSG  160 (256)
T ss_pred             CcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCC
Confidence            9999998754 4688999999999999999999998   99999999999999999999999999998654333222222


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCC
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN  741 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  741 (792)
                      ..++..|+|||.+.+..++.++||||||+++|||++ |+.||..........        .....         .....+
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~--------~i~~~---------~~~~~~  223 (256)
T cd05114         161 AKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVE--------MISRG---------FRLYRP  223 (256)
T ss_pred             CCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHH--------HHHCC---------CCCCCC
Confidence            335668999999998899999999999999999999 888886543211100        00000         001111


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHhHHHHhc
Q 003836          742 VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE  774 (792)
Q Consensus       742 ~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~  774 (792)
                      ......+.+++.+||+.+|++||+++++++.|.
T Consensus       224 ~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~  256 (256)
T cd05114         224 KLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT  256 (256)
T ss_pred             CCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            223457899999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=5.9e-37  Score=331.10  Aligned_cols=243  Identities=24%  Similarity=0.284  Sum_probs=198.1

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      +.||+|+||.||++... .+++.||+|++....   ......+.+|++++++++||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~   79 (323)
T cd05595           1 KLLGKGTFGKVILVREK-ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANG   79 (323)
T ss_pred             CeeeeCCCEEEEEEEEC-CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCC
Confidence            36899999999999753 456799999987532   23345678899999999999999999999999999999999999


Q ss_pred             CCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccccc
Q 003836          584 GTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAI  663 (792)
Q Consensus       584 gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  663 (792)
                      |+|..++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++...... ......
T Consensus        80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~~~~~  155 (323)
T cd05595          80 GELFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-ATMKTF  155 (323)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCC-Cccccc
Confidence            99999998777899999999999999999999998   99999999999999999999999999987542221 222345


Q ss_pred             cccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHH
Q 003836          664 RGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVT  743 (792)
Q Consensus       664 ~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  743 (792)
                      .||+.|+|||.+.+..++.++|||||||++|||++|+.||........   .             ..+.....  ..+..
T Consensus       156 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~---~-------------~~~~~~~~--~~p~~  217 (323)
T cd05595         156 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL---F-------------ELILMEEI--RFPRT  217 (323)
T ss_pred             cCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHH---H-------------HHHhcCCC--CCCCC
Confidence            689999999999999999999999999999999999999965422110   0             00011100  11223


Q ss_pred             HHHHHHHHHHHccccCCCCCC-----CHHhHHHH
Q 003836          744 MLHRFVMVAFWCIQEDPSHRP-----TMRKVTQM  772 (792)
Q Consensus       744 ~~~~l~~l~~~Cl~~~p~~RP-----s~~evl~~  772 (792)
                      .+..+.+++.+||+.||++||     ++.++++.
T Consensus       218 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h  251 (323)
T cd05595         218 LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  251 (323)
T ss_pred             CCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence            456788999999999999998     78888753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-37  Score=328.27  Aligned_cols=265  Identities=23%  Similarity=0.336  Sum_probs=211.5

Q ss_pred             HHHHHHhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccch-HHHHHHHHHhcccCCCCcccccceeccCCceE
Q 003836          497 ELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRL  575 (792)
Q Consensus       497 el~~~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~-~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~  575 (792)
                      |+-...-.|+++||+|-||.|.++..+.  ...||||+++....... ++|.+|+++|.+++||||++|+|+|..++.++
T Consensus       534 EfPRs~L~~~ekiGeGqFGEVhLCeveg--~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePic  611 (807)
T KOG1094|consen  534 EFPRSRLRFKEKIGEGQFGEVHLCEVEG--PLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLC  611 (807)
T ss_pred             hcchhheehhhhhcCcccceeEEEEecC--ceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchH
Confidence            3333333467899999999999998764  47899999998766554 89999999999999999999999999999999


Q ss_pred             EEEEeccCCCccccccCCC--CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCcccc
Q 003836          576 LVYEFMSNGTVASFLFGDS--KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT  653 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~  653 (792)
                      +|+|||++|+|.+||..+.  ...-..-.+|+.||+.||+||.+.   ++|||||.++|+|+|.++++||+|||+++.+.
T Consensus       612 mI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~ly  688 (807)
T KOG1094|consen  612 MITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLY  688 (807)
T ss_pred             HHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccc
Confidence            9999999999999998773  335566778999999999999998   99999999999999999999999999999766


Q ss_pred             CCCCCcc-ccccccCCcccccccccCCCCcccceehHHHHHHHHHh--cCcCCCcchhhhhhhhHHHHHHHhhcccchhH
Q 003836          654 LDQSHTN-TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC--LRRNIDNEISKVDKAILTDWAYDRYQERTLEA  730 (792)
Q Consensus       654 ~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  730 (792)
                      ....... ...+-.++|||||.+..++++.++|||+|||++||+++  ..+|+.........    +-............
T Consensus       689 sg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vv----en~~~~~~~~~~~~  764 (807)
T KOG1094|consen  689 SGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVV----ENAGEFFRDQGRQV  764 (807)
T ss_pred             cCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHH----HhhhhhcCCCCcce
Confidence            5544432 23445789999999999999999999999999999875  56777554322110    11111111111111


Q ss_pred             hhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          731 LVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       731 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                            ....+.-++..+.+++..||..+.++||+++++...|+..
T Consensus       765 ------~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  765 ------VLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             ------eccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence                  1223445677889999999999999999999999988763

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=9.6e-37  Score=320.21  Aligned_cols=255  Identities=25%  Similarity=0.411  Sum_probs=204.6

Q ss_pred             hhhhhhcCccccceEEEeeecCC--CceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMG--SSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~--~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      ..+.+.||+|+||.||+|.....  +...+|||+++... .....++.+|+.++++++|+||+++++++.+.+..++|||
T Consensus         6 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e   85 (266)
T cd05033           6 VTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITE   85 (266)
T ss_pred             ceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEE
Confidence            34567899999999999987543  34579999987543 3345678999999999999999999999999999999999


Q ss_pred             eccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          580 FMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       580 ~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      |+++++|.+++... ..+++..+.+++.|++.||+|||+.   +|+|+||||+|||+++++.+||+|||+++........
T Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~  162 (266)
T cd05033          86 YMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEAT  162 (266)
T ss_pred             cCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhcccccccc
Confidence            99999999999764 4689999999999999999999998   9999999999999999999999999999977522221


Q ss_pred             -ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          659 -TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       659 -~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                       ......++..|+|||.+.+..++.++||||||+++|||++ |..||........    .    ..         +....
T Consensus       163 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~----~----~~---------~~~~~  225 (266)
T cd05033         163 YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDV----I----KA---------VEDGY  225 (266)
T ss_pred             eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHH----H----HH---------HHcCC
Confidence             1112334678999999998899999999999999999998 8888854322100    0    00         00001


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      ....+...+..+.+++.+||+.+|++||+++||+++|++++
T Consensus       226 ~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~~  266 (266)
T cd05033         226 RLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKMI  266 (266)
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence            11112234567889999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=1.2e-36  Score=321.92  Aligned_cols=255  Identities=25%  Similarity=0.415  Sum_probs=204.9

Q ss_pred             HHhhhhhhcCccccceEEEeeecC----CCceEEEEEEccccccc-chHHHHHHHHHhcccCCCCcccccceeccCCceE
Q 003836          501 VTRGFKEELGRGAFGTVYKGFVNM----GSSNHVAVKKLNSVFQD-SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRL  575 (792)
Q Consensus       501 ~~~~~~~~lG~G~~g~Vy~g~~~~----~~~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~  575 (792)
                      ..+.+.+.||+|+||.||+|....    ...+.+|+|+++..... ..+.+.+|++++++++|+||+++++++......+
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   84 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI   84 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence            445667899999999999997642    23468999999765444 4578999999999999999999999999999999


Q ss_pred             EEEEeccCCCccccccCC--------------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCe
Q 003836          576 LVYEFMSNGTVASFLFGD--------------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNA  641 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~--------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~  641 (792)
                      +||||+++++|.+++...              ..+++..+..++.||+.||.|||+.   +++|+||||+||+++.++.+
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~  161 (280)
T cd05049          85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDLVV  161 (280)
T ss_pred             EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCCeE
Confidence            999999999999998643              2467888999999999999999998   99999999999999999999


Q ss_pred             EEeecCCCccccCCCC-CccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHH
Q 003836          642 RISDFGLAKLLTLDQS-HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWA  719 (792)
Q Consensus       642 kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~  719 (792)
                      ||+|||+++....... .......+++.|+|||.+.+..++.++||||||+++|||++ |..||........   .    
T Consensus       162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~---~----  234 (280)
T cd05049         162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEV---I----  234 (280)
T ss_pred             EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHH---H----
Confidence            9999999976533222 11223345778999999999999999999999999999998 9999864322110   0    


Q ss_pred             HHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhcc
Q 003836          720 YDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEG  775 (792)
Q Consensus       720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~  775 (792)
                       ..        + ........+...+..+.+++.+||+.+|++||++.||+++|++
T Consensus       235 -~~--------~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~  280 (280)
T cd05049         235 -EC--------I-TQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK  280 (280)
T ss_pred             -HH--------H-HcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence             00        0 0111111122345678999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=1.5e-36  Score=317.12  Aligned_cols=247  Identities=28%  Similarity=0.385  Sum_probs=199.6

Q ss_pred             hcCccccceEEEeeec-CCCceEEEEEEcccccc--cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCC
Q 003836          508 ELGRGAFGTVYKGFVN-MGSSNHVAVKKLNSVFQ--DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNG  584 (792)
Q Consensus       508 ~lG~G~~g~Vy~g~~~-~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~g  584 (792)
                      +||+|+||.||+|.+. ..+++.+|+|+++....  ...+++.+|+.++++++|+||+++++++. .+..++||||+++|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence            5899999999999753 34567899999865432  23567899999999999999999999885 45678999999999


Q ss_pred             CccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc--ccc
Q 003836          585 TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT--NTA  662 (792)
Q Consensus       585 sL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~--~~~  662 (792)
                      +|.+++.....+++..+.+++.|++.||+|||+.   +|+||||||+|||+++++.+||+|||+++.........  ...
T Consensus        81 ~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~  157 (257)
T cd05116          81 PLNKFLQKNKHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTH  157 (257)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCC
Confidence            9999998777889999999999999999999998   99999999999999999999999999998765433221  122


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCC
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN  741 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  741 (792)
                      ..++..|+|||.+....++.++||||||+++|||++ |+.||........                 ...+........+
T Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-----------------~~~i~~~~~~~~~  220 (257)
T cd05116         158 GKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEV-----------------TQMIESGERMECP  220 (257)
T ss_pred             CCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH-----------------HHHHHCCCCCCCC
Confidence            234578999999988889999999999999999998 8999865422110                 0111111111223


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHhHHHHhcc
Q 003836          742 VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEG  775 (792)
Q Consensus       742 ~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~  775 (792)
                      ...+.++.+++.+||+.+|++||++++|.++|++
T Consensus       221 ~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~  254 (257)
T cd05116         221 QRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN  254 (257)
T ss_pred             CCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence            3455778899999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=9.6e-37  Score=319.20  Aligned_cols=251  Identities=26%  Similarity=0.408  Sum_probs=201.9

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      ..+.++||+|++|.||+|...  .+..||+|++... ....+.+.+|+.++++++|+||+++++.+.+.+..++||||++
T Consensus         8 ~~~~~~lg~g~~g~v~~~~~~--~~~~v~iK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   84 (261)
T cd05072           8 IKLVKKLGAGQFGEVWMGYYN--NSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA   84 (261)
T ss_pred             eEEeeecCCcCCceEEEEEec--CCceEEEEEccCC-chhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence            345678999999999999754  3457999998653 2345789999999999999999999999999999999999999


Q ss_pred             CCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          583 NGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       583 ~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +++|.+++...  ..+++..+..++.|++.||+|||+.   +++|+||||+||++++++.+||+|||+++..........
T Consensus        85 ~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~  161 (261)
T cd05072          85 KGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAR  161 (261)
T ss_pred             CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCCceecc
Confidence            99999999653  4678889999999999999999998   999999999999999999999999999987654332222


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      ....++..|+|||.+....++.++||||||+++|||++ |+.||........   . .    ....         .....
T Consensus       162 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~---~-~----~~~~---------~~~~~  224 (261)
T cd05072         162 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDV---M-S----ALQR---------GYRMP  224 (261)
T ss_pred             CCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHH---H-H----HHHc---------CCCCC
Confidence            23345678999999998899999999999999999998 8888864322110   0 0    0000         00111


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                      .....+..+.+++.+|++.+|++||+++++.+.|+.+
T Consensus       225 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  261 (261)
T cd05072         225 RMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF  261 (261)
T ss_pred             CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence            1122446788999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=8.5e-37  Score=324.62  Aligned_cols=257  Identities=24%  Similarity=0.396  Sum_probs=205.1

Q ss_pred             hhhhhhcCccccceEEEeeec----CCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVN----MGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~----~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~  578 (792)
                      ..+.+.||+|+||.||++...    ..+...+|+|.+........+.+.+|+.++++++|+||+++++++...+..++||
T Consensus         7 ~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   86 (288)
T cd05093           7 IVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVF   86 (288)
T ss_pred             eeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEE
Confidence            345678999999999999752    2344579999998765566678999999999999999999999999999999999


Q ss_pred             EeccCCCccccccCCC-------------CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEee
Q 003836          579 EFMSNGTVASFLFGDS-------------KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISD  645 (792)
Q Consensus       579 E~~~~gsL~~~l~~~~-------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~D  645 (792)
                      ||+++++|.+++....             .+++..+..++.|++.||+|||+.   +++||||||+|||+++++.+||+|
T Consensus        87 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~~kl~d  163 (288)
T cd05093          87 EYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGD  163 (288)
T ss_pred             EcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcEEecc
Confidence            9999999999986432             478999999999999999999998   999999999999999999999999


Q ss_pred             cCCCccccCCCCC-ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhh
Q 003836          646 FGLAKLLTLDQSH-TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRY  723 (792)
Q Consensus       646 fg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~  723 (792)
                      ||+++........ ......++..|+|||.+.+..++.++||||||++++||++ |..||.......   ..     ...
T Consensus       164 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~---~~-----~~i  235 (288)
T cd05093         164 FGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE---VI-----ECI  235 (288)
T ss_pred             CCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HH-----HHH
Confidence            9999865432221 1122335778999999998899999999999999999998 888885432211   00     000


Q ss_pred             cccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCC
Q 003836          724 QERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEV  779 (792)
Q Consensus       724 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~  779 (792)
                      .....         ...+...+..+.+++.+||+.+|.+|||++|+++.|+++...
T Consensus       236 ~~~~~---------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~  282 (288)
T cd05093         236 TQGRV---------LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA  282 (288)
T ss_pred             HcCCc---------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence            11110         001112345789999999999999999999999999887643

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=1.9e-36  Score=316.91  Aligned_cols=252  Identities=24%  Similarity=0.416  Sum_probs=207.2

Q ss_pred             HhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .+.+.++||.|+||.||+|....  ++.+++|.+..........+.+|+.++++++|+||+++++++.+.+..++||||+
T Consensus         7 ~y~~~~~ig~g~~~~vy~~~~~~--~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   84 (261)
T cd05148           7 EFTLERKLGSGYFGEVWEGLWKN--RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELM   84 (261)
T ss_pred             HHHHhhhhccCCCccEEEeEecC--CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeec
Confidence            35567899999999999997654  5789999998765556678999999999999999999999999999999999999


Q ss_pred             cCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          582 SNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       582 ~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      ++++|.+++...  ..+++..+.+++.||+.||.|||+.   +|+|+||||+||++++++.+||+|||.+......... 
T Consensus        85 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~-  160 (261)
T cd05148          85 EKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYL-  160 (261)
T ss_pred             ccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCCcccc-
Confidence            999999999764  4678999999999999999999998   9999999999999999999999999999876432222 


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      .....++..|+|||.+....++.++||||||+++++|++ |+.||........   +             . .+......
T Consensus       161 ~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~---~-------------~-~~~~~~~~  223 (261)
T cd05148         161 SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEV---Y-------------D-QITAGYRM  223 (261)
T ss_pred             ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHH---H-------------H-HHHhCCcC
Confidence            123345778999999988899999999999999999998 7888865432110   0             0 00111111


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                      ..+...+..+.+++.+||+.+|.+|||++++++.|+.+
T Consensus       224 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~  261 (261)
T cd05148         224 PCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI  261 (261)
T ss_pred             CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence            22334556788999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=1.1e-36  Score=330.63  Aligned_cols=258  Identities=25%  Similarity=0.372  Sum_probs=201.6

Q ss_pred             HhhhhhhcCccccceEEEeeecC----CCceEEEEEEcccccc-cchHHHHHHHHHhccc-CCCCcccccceecc-CCce
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNM----GSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQT-HHKNLVRLLGYCDE-GQNR  574 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~----~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~-~~~~  574 (792)
                      .+.+.+.||+|+||.||+|....    .+++.||+|++..... ...+.+..|+.++.++ +|+||++++++|.. +...
T Consensus         8 ~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~   87 (337)
T cd05054           8 RLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPL   87 (337)
T ss_pred             HhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCE
Confidence            45667899999999999996421    2346899999875432 2345688899999999 89999999998864 4578


Q ss_pred             EEEEEeccCCCccccccCC-------------------------------------------------------------
Q 003836          575 LLVYEFMSNGTVASFLFGD-------------------------------------------------------------  593 (792)
Q Consensus       575 ~lV~E~~~~gsL~~~l~~~-------------------------------------------------------------  593 (792)
                      +++|||+++++|.+++...                                                             
T Consensus        88 ~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (337)
T cd05054          88 MVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYK  167 (337)
T ss_pred             EEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhh
Confidence            8999999999999887532                                                             


Q ss_pred             CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc-cccccccCCcccc
Q 003836          594 SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT-NTAIRGTKGYVAP  672 (792)
Q Consensus       594 ~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aP  672 (792)
                      ..+++..+..++.||+.||+|||+.   +|+||||||+|||+++++.+||+|||+++.+....... .....++..|+||
T Consensus       168 ~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP  244 (337)
T cd05054         168 EPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP  244 (337)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCc
Confidence            2568889999999999999999998   99999999999999999999999999998764332221 2234467789999


Q ss_pred             cccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHH
Q 003836          673 EWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMV  751 (792)
Q Consensus       673 E~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  751 (792)
                      |++.+..++.++|||||||++|||++ |..||........   +             ...+........+.....++.++
T Consensus       245 E~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~---~-------------~~~~~~~~~~~~~~~~~~~~~~l  308 (337)
T cd05054         245 ESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE---F-------------CRRLKEGTRMRAPEYATPEIYSI  308 (337)
T ss_pred             HHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH---H-------------HHHHhccCCCCCCccCCHHHHHH
Confidence            99999999999999999999999998 9988864321100   0             00011111111222345678999


Q ss_pred             HHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          752 AFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       752 ~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                      +.+||+.+|++||++.||+++|+.+++
T Consensus       309 ~~~cl~~~p~~RPs~~ell~~l~~~~~  335 (337)
T cd05054         309 MLDCWHNNPEDRPTFSELVEILGDLLQ  335 (337)
T ss_pred             HHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=1.3e-36  Score=323.62  Aligned_cols=254  Identities=23%  Similarity=0.391  Sum_probs=204.8

Q ss_pred             hhhhcCccccceEEEeeecC----CCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          505 FKEELGRGAFGTVYKGFVNM----GSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~----~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      +.+.||+|+||.||+++...    .+...+++|.+........+.+.+|++++++++|+||+++++++...+..++||||
T Consensus         9 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   88 (291)
T cd05094           9 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEY   88 (291)
T ss_pred             EeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEec
Confidence            45789999999999997532    23457899998776555667899999999999999999999999999999999999


Q ss_pred             ccCCCccccccCC----------------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEe
Q 003836          581 MSNGTVASFLFGD----------------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARIS  644 (792)
Q Consensus       581 ~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~  644 (792)
                      +++++|.+++...                ..+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+
T Consensus        89 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~  165 (291)
T cd05094          89 MKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIG  165 (291)
T ss_pred             CCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcEEEC
Confidence            9999999998643                2378899999999999999999998   99999999999999999999999


Q ss_pred             ecCCCccccCCCC-CccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHh
Q 003836          645 DFGLAKLLTLDQS-HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDR  722 (792)
Q Consensus       645 Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~  722 (792)
                      |||+++....... .......++..|+|||.+.+..++.++||||||+++|||++ |+.||........   .     ..
T Consensus       166 dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~---~-----~~  237 (291)
T cd05094         166 DFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEV---I-----EC  237 (291)
T ss_pred             CCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH---H-----HH
Confidence            9999976543221 11223446788999999999999999999999999999999 9998855432110   0     00


Q ss_pred             hcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          723 YQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       723 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                      .....         ....+...+..+.+++.+||+.+|++||++++|+++|+.+..
T Consensus       238 ~~~~~---------~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~  284 (291)
T cd05094         238 ITQGR---------VLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK  284 (291)
T ss_pred             HhCCC---------CCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence            11111         111122345678899999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=1.7e-36  Score=327.64  Aligned_cols=244  Identities=24%  Similarity=0.289  Sum_probs=198.2

Q ss_pred             hhcCccccceEEEeeecC--CCceEEEEEEccccc----ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          507 EELGRGAFGTVYKGFVNM--GSSNHVAVKKLNSVF----QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~--~~~~~vavK~~~~~~----~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      +.||+|+||.||++....  ..++.+|+|+++...    ......+.+|+.++++++||||+++++++..++..++||||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            579999999999987532  356789999987532    22345678999999999999999999999999999999999


Q ss_pred             ccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          581 MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       581 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +++++|.+++.....+.+..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++...... ...
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~  157 (323)
T cd05584          82 LSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG-TVT  157 (323)
T ss_pred             CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC-Ccc
Confidence            99999999998878888899999999999999999998   99999999999999999999999999987543222 222


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ....|++.|+|||.+.+..++.++|||||||++|||++|+.||........                ...+.....  ..
T Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~----------------~~~~~~~~~--~~  219 (323)
T cd05584         158 HTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKT----------------IDKILKGKL--NL  219 (323)
T ss_pred             cccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHH----------------HHHHHcCCC--CC
Confidence            345689999999999988899999999999999999999999975432110                011111111  11


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCC-----CHHhHHHH
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRP-----TMRKVTQM  772 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RP-----s~~evl~~  772 (792)
                      +......+.+++.+||+.+|++||     +++++++.
T Consensus       220 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h  256 (323)
T cd05584         220 PPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH  256 (323)
T ss_pred             CCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence            223456788999999999999999     78888763

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=1.1e-36  Score=330.39  Aligned_cols=267  Identities=21%  Similarity=0.293  Sum_probs=202.9

Q ss_pred             HHHhhhhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEE
Q 003836          500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       500 ~~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~  578 (792)
                      ...+.+.++||+|+||.||++... .++..+|+|++.... ......+.+|++++++++|+||++++++|.+.+..++||
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~-~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   82 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHK-PSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM   82 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEEC-CCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEE
Confidence            344556788999999999999754 456789999886542 234467899999999999999999999999999999999


Q ss_pred             EeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          579 EFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       579 E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      ||+++|+|.+++.....+++.....++.|++.||.|||+.  .+|+|+||||+|||+++++.+||+|||++......   
T Consensus        83 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~---  157 (333)
T cd06650          83 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---  157 (333)
T ss_pred             ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh---
Confidence            9999999999998877889999999999999999999974  26999999999999999999999999999765322   


Q ss_pred             ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHH-----HHHHh-----------
Q 003836          659 TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTD-----WAYDR-----------  722 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~-----~~~~~-----------  722 (792)
                      ......|+..|+|||.+.+..++.++|||||||++|||++|+.||...........+..     .....           
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (333)
T cd06650         158 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRP  237 (333)
T ss_pred             ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccch
Confidence            12234689999999999988999999999999999999999999965432111000000     00000           


Q ss_pred             ---hc-----ccchhHhhhchhc---ccC-CHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          723 ---YQ-----ERTLEALVENDLE---AMN-NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       723 ---~~-----~~~~~~~~~~~~~---~~~-~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                         ..     ......+.+....   ... ......++.+++.+||+.||++|||++|+++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h  299 (333)
T cd06650         238 LSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVH  299 (333)
T ss_pred             hhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhC
Confidence               00     0000001111000   000 11234678899999999999999999999763

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=4.7e-37  Score=343.72  Aligned_cols=256  Identities=21%  Similarity=0.311  Sum_probs=210.6

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccC-CCCcccccc-eecc------CCceEE
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH-HKNLVRLLG-YCDE------GQNRLL  576 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~g-~~~~------~~~~~l  576 (792)
                      +.+.|.+|||+.||.+....+ +..+|+|++-..++...+.+++||++|++|. |+|||.+++ ....      .-+.+|
T Consensus        41 V~~vLAEGGFa~VYla~~~~~-~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Evll  119 (738)
T KOG1989|consen   41 VEKVLAEGGFAQVYLAQDVKG-GKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLL  119 (738)
T ss_pred             EEEEEccCCcEEEEEEEecCC-CceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEe
Confidence            346799999999999987644 3789999998777788889999999999997 999999999 3321      236789


Q ss_pred             EEEeccCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccC
Q 003836          577 VYEFMSNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL  654 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~  654 (792)
                      +||||++|+|-+++..+  ..+++.++++|+.|+++|+++||.. .++|||||||.+||||+.+++.||||||.|.-...
T Consensus       120 LmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~  198 (738)
T KOG1989|consen  120 LMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSATTKIL  198 (738)
T ss_pred             ehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccccccccC
Confidence            99999999999999754  4699999999999999999999986 56799999999999999999999999999875433


Q ss_pred             CCC-Cc-------cccccccCCccccccc---ccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhh
Q 003836          655 DQS-HT-------NTAIRGTKGYVAPEWF---RNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRY  723 (792)
Q Consensus       655 ~~~-~~-------~~~~~gt~~y~aPE~~---~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~  723 (792)
                      ... ..       .-...-|+-|+|||++   .+.++++|+|||+|||+||-|+....||+....               
T Consensus       199 ~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~---------------  263 (738)
T KOG1989|consen  199 SPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK---------------  263 (738)
T ss_pred             CCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc---------------
Confidence            221 11       1112368999999987   578899999999999999999999999975422               


Q ss_pred             cccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCCCCC
Q 003836          724 QERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPIP  782 (792)
Q Consensus       724 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~~~p  782 (792)
                           .+++.....-.....++..+.+||..||+.||.+||++-||++.+.++...+.|
T Consensus       264 -----laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~  317 (738)
T KOG1989|consen  264 -----LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCP  317 (738)
T ss_pred             -----eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCC
Confidence                 223334444444467889999999999999999999999999999887655444

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=9.9e-37  Score=329.83  Aligned_cols=243  Identities=23%  Similarity=0.263  Sum_probs=197.5

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      +.||+|+||.||++... .+++.+|+|++....   ......+.+|++++++++||||+++++++...+..++||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~-~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   79 (325)
T cd05594           1 KLLGKGTFGKVILVKEK-ATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG   79 (325)
T ss_pred             CeeeeCCCEEEEEEEEC-CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            36899999999999653 456799999987532   22345678899999999999999999999999999999999999


Q ss_pred             CCccccccCCCCCchhHHHHHHHHHHHHHHHHhh-ccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          584 GTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE-ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       584 gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      |+|..++.....+++..+..++.||+.||+|||+ .   +|+||||||+|||++.++.+||+|||+++...... .....
T Consensus        80 ~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~~~~  155 (325)
T cd05594          80 GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG-ATMKT  155 (325)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC-ccccc
Confidence            9999999887889999999999999999999997 6   99999999999999999999999999987543222 12234


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCH
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV  742 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  742 (792)
                      ..||+.|+|||.+.+..++.++|||||||++|||++|+.||..........                .+....  ...+.
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~----------------~i~~~~--~~~p~  217 (325)
T cd05594         156 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFE----------------LILMEE--IRFPR  217 (325)
T ss_pred             ccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHH----------------HHhcCC--CCCCC
Confidence            568999999999999999999999999999999999999996542211000                000000  01122


Q ss_pred             HHHHHHHHHHHHccccCCCCCC-----CHHhHHHH
Q 003836          743 TMLHRFVMVAFWCIQEDPSHRP-----TMRKVTQM  772 (792)
Q Consensus       743 ~~~~~l~~l~~~Cl~~~p~~RP-----s~~evl~~  772 (792)
                      ....++.+++.+||+.||++|+     ++.++++.
T Consensus       218 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  252 (325)
T cd05594         218 TLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH  252 (325)
T ss_pred             CCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence            3456788999999999999996     89998864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=1.6e-36  Score=326.92  Aligned_cols=255  Identities=25%  Similarity=0.353  Sum_probs=200.6

Q ss_pred             HhhhhhhcCccccceEEEeeecCCC---ceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEE
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGS---SNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLV  577 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~---~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV  577 (792)
                      .+...+.||+|+||.||+|.+....   ...||+|+++... ....+++.+|+.+++.++|+||++++|+|... ..++|
T Consensus         8 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v   86 (316)
T cd05108           8 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLI   86 (316)
T ss_pred             hceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cceee
Confidence            3445578999999999999764322   2358999987543 34457899999999999999999999999765 56799


Q ss_pred             EEeccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC
Q 003836          578 YEFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~  656 (792)
                      +||+++|+|.+++... ..+++..+++++.||+.||+|||+.   +|+||||||+|||+++++.+||+|||+++......
T Consensus        87 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~  163 (316)
T cd05108          87 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADE  163 (316)
T ss_pred             eecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEccccccccccCCC
Confidence            9999999999999765 4678899999999999999999998   99999999999999999999999999998765433


Q ss_pred             CCcc-ccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhc
Q 003836          657 SHTN-TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEN  734 (792)
Q Consensus       657 ~~~~-~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  734 (792)
                      .... ....++..|+|||.+.+..++.++||||||+++|||++ |+.||........                 ...+..
T Consensus       164 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~-----------------~~~~~~  226 (316)
T cd05108         164 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-----------------SSILEK  226 (316)
T ss_pred             cceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-----------------HHHHhC
Confidence            2211 12234678999999999999999999999999999998 8999865322110                 001111


Q ss_pred             hhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          735 DLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       735 ~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      ......+......+.+++.+||+.+|++||++.+++..|..+.
T Consensus       227 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~  269 (316)
T cd05108         227 GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA  269 (316)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            1111112223456789999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.3e-37  Score=333.82  Aligned_cols=250  Identities=22%  Similarity=0.325  Sum_probs=202.7

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      .+.+.||+|+||+||++... .+++.||+|++....   ......+.+|++++..++|+||+++++++.+++..++||||
T Consensus         4 ~~~~~lg~G~~g~Vy~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   82 (350)
T cd05573           4 EVIKVIGRGAFGEVWLVRDK-DTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEY   82 (350)
T ss_pred             eEEEEEEeCCcEEEEEEEEC-CCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcC
Confidence            34578999999999999754 456799999987532   23456789999999999999999999999999999999999


Q ss_pred             ccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC----
Q 003836          581 MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ----  656 (792)
Q Consensus       581 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~----  656 (792)
                      +++++|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++......    
T Consensus        83 ~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~  159 (350)
T cd05573          83 MPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREY  159 (350)
T ss_pred             CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccc
Confidence            99999999998878899999999999999999999998   99999999999999999999999999998765433    


Q ss_pred             ------------------------CCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhh
Q 003836          657 ------------------------SHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDK  712 (792)
Q Consensus       657 ------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~  712 (792)
                                              ........||+.|+|||.+.+..++.++|||||||++|||++|+.||.........
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~  239 (350)
T cd05573         160 YLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETY  239 (350)
T ss_pred             cccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHH
Confidence                                    11223356899999999999999999999999999999999999999764322111


Q ss_pred             hhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCC-HHhHHHH
Q 003836          713 AILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPT-MRKVTQM  772 (792)
Q Consensus       713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs-~~evl~~  772 (792)
                      ..+..+     .         ...........+.++.+++..|++ +|.+||+ ++|+++.
T Consensus       240 ~~i~~~-----~---------~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h  285 (350)
T cd05573         240 NKIINW-----K---------ESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH  285 (350)
T ss_pred             HHHhcc-----C---------CcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence            000000     0         111111111145678889999998 9999999 9999975

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.6e-37  Score=314.67  Aligned_cols=256  Identities=23%  Similarity=0.283  Sum_probs=194.4

Q ss_pred             hhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCC-----ceEEEEEe
Q 003836          506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQ-----NRLLVYEF  580 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~-----~~~lV~E~  580 (792)
                      .+++|.|+||.||+|++... ++.||||++-...    +.-.+|+.+|++++|||||+|+-+|....     ...|||||
T Consensus        29 ~~liG~GsFg~Vyq~~~~e~-~~~vAIKKv~~d~----r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVley  103 (364)
T KOG0658|consen   29 VRLIGSGSFGVVYQAKLRET-EEEVAIKKVLQDK----RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEY  103 (364)
T ss_pred             eEEEeecccceEEEEEEcCC-CceeEEEEecCCC----CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHh
Confidence            35799999999999988644 6899999985432    23457999999999999999999884322     33489999


Q ss_pred             ccCCCccccccC----CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC-CCeEEeecCCCccccCC
Q 003836          581 MSNGTVASFLFG----DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH-YNARISDFGLAKLLTLD  655 (792)
Q Consensus       581 ~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~-~~~kl~Dfg~a~~~~~~  655 (792)
                      ||. +|.++++.    +..++...+.-+..||++||+|||+.   +|+||||||.|+|+|.+ |.+||||||.|+.+...
T Consensus       104 mP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~  179 (364)
T KOG0658|consen  104 MPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKG  179 (364)
T ss_pred             chH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcceeeccC
Confidence            998 88888864    46778888888999999999999998   99999999999999966 99999999999988654


Q ss_pred             CCCccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHH----H-------hh
Q 003836          656 QSHTNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAY----D-------RY  723 (792)
Q Consensus       656 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~----~-------~~  723 (792)
                      +..  .....|..|+|||.+.+ ..|+.+.||||.||++.||+-|+.-|...........+....-    +       ..
T Consensus       180 epn--iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y  257 (364)
T KOG0658|consen  180 EPN--ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNY  257 (364)
T ss_pred             CCc--eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCccc
Confidence            433  45567899999999876 6799999999999999999999999877544322221111000    0       00


Q ss_pred             cccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          724 QERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       724 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .+....++...............+.++++.++|+.+|.+|.++.|++.+
T Consensus       258 ~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h  306 (364)
T KOG0658|consen  258 TEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH  306 (364)
T ss_pred             ccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence            0111111111111111233456788999999999999999999998864

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=2.5e-36  Score=320.16  Aligned_cols=268  Identities=26%  Similarity=0.360  Sum_probs=204.4

Q ss_pred             hhhhhcCccccceEEEeee---cCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccC--CceEEE
Q 003836          504 GFKEELGRGAFGTVYKGFV---NMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEG--QNRLLV  577 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~---~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~--~~~~lV  577 (792)
                      .+.+.||+|+||+||++..   ...+++.+|+|.+.... ......+.+|++++++++||||+++++++...  ...++|
T Consensus         7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   86 (283)
T cd05080           7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI   86 (283)
T ss_pred             eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence            4557899999999988653   23456789999987543 23456789999999999999999999988653  457899


Q ss_pred             EEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC
Q 003836          578 YEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      |||+++++|.+++... .+++..+..++.|+++||.|||+.   +|+|+||||+|||+++++.+||+|||+++.......
T Consensus        87 ~e~~~~~~l~~~~~~~-~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~  162 (283)
T cd05080          87 MEYVPLGSLRDYLPKH-KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE  162 (283)
T ss_pred             ecCCCCCCHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccccCCcch
Confidence            9999999999998654 589999999999999999999998   999999999999999999999999999987643322


Q ss_pred             Cc--cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          658 HT--NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       658 ~~--~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                      ..  .....++..|+|||.+.+..++.++||||||++++||++|..|+...........  ...........+...++..
T Consensus       163 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  240 (283)
T cd05080         163 YYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMI--GPKQGQMTVVRLIELLERG  240 (283)
T ss_pred             hhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhh--cccccccchhhhhhhhhcC
Confidence            11  1122356679999999888999999999999999999999999854332111100  0000001111122222222


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      .....+...+..+.+++.+||+.+|++|||+++|+++|+.+.
T Consensus       241 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         241 MRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             CCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence            222233345678899999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=1.9e-36  Score=328.70  Aligned_cols=252  Identities=21%  Similarity=0.245  Sum_probs=199.7

Q ss_pred             hhhhhcCccccceEEEeeecC--CCceEEEEEEccccc----ccchHHHHHHHHHhccc-CCCCcccccceeccCCceEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNM--GSSNHVAVKKLNSVF----QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLL  576 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~--~~~~~vavK~~~~~~----~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~l  576 (792)
                      .+.+.||+|+||.||++....  .+++.+|+|++.+..    ....+.+.+|+.++.++ +|+||+++++++.+.+..++
T Consensus         3 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l   82 (332)
T cd05614           3 ELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHL   82 (332)
T ss_pred             eEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEE
Confidence            345789999999999986532  356789999986532    22345678899999999 59999999999999999999


Q ss_pred             EEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC
Q 003836          577 VYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~  656 (792)
                      ||||+++|+|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++......
T Consensus        83 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~  159 (332)
T cd05614          83 ILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEE  159 (332)
T ss_pred             EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCccccccC
Confidence            999999999999998878899999999999999999999998   99999999999999999999999999998764443


Q ss_pred             CCccccccccCCcccccccccC-CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          657 SHTNTAIRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       657 ~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                      ........||+.|+|||.+.+. .++.++|||||||++|||++|+.||...........+.    .        .+..  
T Consensus       160 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~----~--------~~~~--  225 (332)
T cd05614         160 KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVS----R--------RILK--  225 (332)
T ss_pred             CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHH----H--------HHhc--
Confidence            3333446799999999999765 47899999999999999999999996432211110000    0        0000  


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCC-----CHHhHHHH
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRP-----TMRKVTQM  772 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RP-----s~~evl~~  772 (792)
                      .....+......+.+++.+||+.||++||     +++++++.
T Consensus       226 ~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h  267 (332)
T cd05614         226 CDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH  267 (332)
T ss_pred             CCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence            01112223456778999999999999999     67777754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=2.2e-36  Score=315.64  Aligned_cols=249  Identities=26%  Similarity=0.405  Sum_probs=200.1

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.+.||+|+||+||++....  ...+|+|.+... .....++.+|+.++++++||||+++++++.+....++||||++
T Consensus         6 ~~~~~~lg~G~~~~vy~~~~~~--~~~~aik~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05113           6 LTFLKELGTGQFGVVKYGKWRG--QYDVAIKMIKEG-SMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS   82 (256)
T ss_pred             eEEeeEecCcccceEEEEEecC--CCcEEEEEcCCC-cccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence            3456789999999999997543  346999988754 2345779999999999999999999999999999999999999


Q ss_pred             CCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          583 NGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       583 ~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      +|+|.+++... ..+++..+.+++.||+.||+|||+.   +++|+||||+||++++++.+||+|||.++...........
T Consensus        83 ~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~  159 (256)
T cd05113          83 NGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSV  159 (256)
T ss_pred             CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCceeecC
Confidence            99999999764 4689999999999999999999998   9999999999999999999999999999866443322222


Q ss_pred             cccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ...++..|+|||.+.+..++.++||||||+++|||++ |+.||.........        ...         ........
T Consensus       160 ~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~--------~~~---------~~~~~~~~  222 (256)
T cd05113         160 GSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETV--------EKV---------SQGLRLYR  222 (256)
T ss_pred             CCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHH--------HHH---------hcCCCCCC
Confidence            2335678999999998889999999999999999998 88888643221100        000         00011111


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhc
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE  774 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~  774 (792)
                      +...+..+.+++.+||+.+|.+||++.+|++.|+
T Consensus       223 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         223 PHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence            2223567899999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=2.5e-36  Score=320.12  Aligned_cols=253  Identities=27%  Similarity=0.411  Sum_probs=199.9

Q ss_pred             hhhhhhcCccccceEEEeeec---CCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVN---MGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~---~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~  578 (792)
                      ..+.+.||+|+||.||+|...   ....+.+++|.+.... ......+.+|++++++++|+||+++++++..+...++||
T Consensus         7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~   86 (283)
T cd05090           7 VRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLF   86 (283)
T ss_pred             ceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEE
Confidence            345678999999999999752   2345789999997533 233467899999999999999999999999999999999


Q ss_pred             EeccCCCccccccCC-----------------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCe
Q 003836          579 EFMSNGTVASFLFGD-----------------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNA  641 (792)
Q Consensus       579 E~~~~gsL~~~l~~~-----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~  641 (792)
                      ||+++++|.+++...                 ..+++.....++.|++.||+|||+.   +|+|+||||+|||+++++.+
T Consensus        87 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~~~~  163 (283)
T cd05090          87 EYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQLHV  163 (283)
T ss_pred             EcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCCCcE
Confidence            999999999988522                 2467888999999999999999998   99999999999999999999


Q ss_pred             EEeecCCCccccCCCC-CccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHH
Q 003836          642 RISDFGLAKLLTLDQS-HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWA  719 (792)
Q Consensus       642 kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~  719 (792)
                      ||+|||+++....... .......++..|+|||.+.+..++.++||||||+++|||++ |..||........   . .  
T Consensus       164 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~---~-~--  237 (283)
T cd05090         164 KISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEV---I-E--  237 (283)
T ss_pred             EeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH---H-H--
Confidence            9999999987643322 12223345678999999988889999999999999999998 8888854321100   0 0  


Q ss_pred             HHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhcc
Q 003836          720 YDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEG  775 (792)
Q Consensus       720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~  775 (792)
                                 .+........+.....++.+++.+||+.+|++||++.+|.++|.+
T Consensus       238 -----------~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         238 -----------MVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             -----------HHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence                       000000111122345678889999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=1.8e-36  Score=343.99  Aligned_cols=249  Identities=18%  Similarity=0.239  Sum_probs=201.2

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.+.||+|++|.||++......++.||+|++..........+.+|+.++++++||||+++++++...+..+|||||++
T Consensus        69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~  148 (478)
T PTZ00267         69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGS  148 (478)
T ss_pred             EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCC
Confidence            44567899999999999976544367888888765544455678899999999999999999999999999999999999


Q ss_pred             CCCccccccC----CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC-
Q 003836          583 NGTVASFLFG----DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS-  657 (792)
Q Consensus       583 ~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~-  657 (792)
                      +|+|.+++..    ...+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++....... 
T Consensus       149 gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~  225 (478)
T PTZ00267        149 GGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL  225 (478)
T ss_pred             CCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc
Confidence            9999988753    24578889999999999999999998   999999999999999999999999999987643322 


Q ss_pred             CccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhc
Q 003836          658 HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLE  737 (792)
Q Consensus       658 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  737 (792)
                      .......||+.|+|||.+.+..++.++|||||||++|||++|+.||.......   .+             ..+..... 
T Consensus       226 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~---~~-------------~~~~~~~~-  288 (478)
T PTZ00267        226 DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE---IM-------------QQVLYGKY-  288 (478)
T ss_pred             ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH---HH-------------HHHHhCCC-
Confidence            12334569999999999999999999999999999999999999996532210   00             01111100 


Q ss_pred             ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          738 AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       738 ~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ...+...+..+.+++..||+.+|++||+++++++
T Consensus       289 ~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        289 DPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence            1112234567889999999999999999999874

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=4.3e-36  Score=312.58  Aligned_cols=247  Identities=26%  Similarity=0.389  Sum_probs=197.8

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCCC
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGT  585 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~gs  585 (792)
                      +.||+|+||.||+|... .+++.+|+|.+.... .+....+.+|++++++++|+||+++++++......++||||+++++
T Consensus         1 ~~lg~g~~g~vy~~~~~-~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   79 (252)
T cd05084           1 ERIGRGNFGEVFSGRLR-ADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD   79 (252)
T ss_pred             CccCcccCccEEEEEEe-cCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCc
Confidence            46999999999999764 346789999876533 3345679999999999999999999999999999999999999999


Q ss_pred             ccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc-ccc
Q 003836          586 VASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN-TAI  663 (792)
Q Consensus       586 L~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~-~~~  663 (792)
                      |.+++... ..+++..+..++.|++.||.|||+.   +|+|+||||+|||++.++.+||+|||+++.......... ...
T Consensus        80 L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  156 (252)
T cd05084          80 FLTFLRTEGPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMK  156 (252)
T ss_pred             HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccccccCCCC
Confidence            99999654 4688999999999999999999998   999999999999999999999999999876532211111 111


Q ss_pred             cccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCH
Q 003836          664 RGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV  742 (792)
Q Consensus       664 ~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  742 (792)
                      ..+..|+|||.+.+..++.++||||||+++|||++ |..|+........                 ...+........+.
T Consensus       157 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~-----------------~~~~~~~~~~~~~~  219 (252)
T cd05084         157 QIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQT-----------------REAIEQGVRLPCPE  219 (252)
T ss_pred             CCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHH-----------------HHHHHcCCCCCCcc
Confidence            23457999999999899999999999999999998 7888754322110                 00111111112233


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHhHHHHhc
Q 003836          743 TMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE  774 (792)
Q Consensus       743 ~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~  774 (792)
                      ..+..+.+++.+||+.+|++|||+++|+++|+
T Consensus       220 ~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         220 LCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence            34567889999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=2.5e-36  Score=325.80  Aligned_cols=237  Identities=25%  Similarity=0.358  Sum_probs=192.9

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEEEecc
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.||+|+||+||+++.. .+++.||+|++.+..   ....+.+..|+.++..+ +||||+++++++.+.+..++||||++
T Consensus         1 ~~lg~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~   79 (320)
T cd05590           1 RVLGKGSFGKVMLARLK-ESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVN   79 (320)
T ss_pred             CeeeeCCCeEEEEEEEc-CCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCC
Confidence            36899999999999754 456789999987532   23445677888888876 69999999999999999999999999


Q ss_pred             CCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          583 NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       583 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      +|+|.+++.....+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++...... .....
T Consensus        80 ~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~-~~~~~  155 (320)
T cd05590          80 GGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG-KTTST  155 (320)
T ss_pred             CchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC-Ccccc
Confidence            999999998878899999999999999999999998   99999999999999999999999999987543222 22234


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCH
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV  742 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  742 (792)
                      ..||+.|+|||.+.+..++.++|||||||++|||++|+.||........   .             ..+....  ...+.
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~---~-------------~~i~~~~--~~~~~  217 (320)
T cd05590         156 FCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDL---F-------------EAILNDE--VVYPT  217 (320)
T ss_pred             cccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH---H-------------HHHhcCC--CCCCC
Confidence            5689999999999999999999999999999999999999975432110   0             0011100  01122


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCH
Q 003836          743 TMLHRFVMVAFWCIQEDPSHRPTM  766 (792)
Q Consensus       743 ~~~~~l~~l~~~Cl~~~p~~RPs~  766 (792)
                      ....++.+++.+||+.||.+||++
T Consensus       218 ~~~~~~~~li~~~L~~dP~~R~~~  241 (320)
T cd05590         218 WLSQDAVDILKAFMTKNPTMRLGS  241 (320)
T ss_pred             CCCHHHHHHHHHHcccCHHHCCCC
Confidence            345678899999999999999998

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=4.7e-36  Score=317.32  Aligned_cols=253  Identities=25%  Similarity=0.331  Sum_probs=197.5

Q ss_pred             hhhhcCccccceEEEeeecCCCc---eEEEEEEcccccc-cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSS---NHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~---~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      +.+.||+|+||+||+|.......   ..+++|++..... ....++..|+..+++++|+||+++++++.. ...++++||
T Consensus        11 ~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~i~e~   89 (279)
T cd05111          11 KLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQLVTQL   89 (279)
T ss_pred             eccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEEEEEe
Confidence            45789999999999997643222   2578888764322 234678888889999999999999999864 457789999


Q ss_pred             ccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC-C
Q 003836          581 MSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS-H  658 (792)
Q Consensus       581 ~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~-~  658 (792)
                      +++|+|.+++... ..+++..+..++.||+.||+|||+.   +++|+||||+|||+++++.+||+|||+++....... .
T Consensus        90 ~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~  166 (279)
T cd05111          90 SPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKY  166 (279)
T ss_pred             CCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccceeccCCCccc
Confidence            9999999999764 5689999999999999999999998   999999999999999999999999999987643322 1


Q ss_pred             ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhc
Q 003836          659 TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLE  737 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  737 (792)
                      ......++..|+|||.+.+..++.++||||||+++|||++ |+.||........    ..             ++.....
T Consensus       167 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~----~~-------------~~~~~~~  229 (279)
T cd05111         167 FYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEV----PD-------------LLEKGER  229 (279)
T ss_pred             ccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH----HH-------------HHHCCCc
Confidence            2233456788999999998899999999999999999998 9988865422110    00             0111001


Q ss_pred             ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          738 AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       738 ~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                      ...+......+.+++.+||..+|++|||+.|+++.|+.+.+
T Consensus       230 ~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~  270 (279)
T cd05111         230 LAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR  270 (279)
T ss_pred             CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence            11111223467789999999999999999999999988664

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=2.5e-36  Score=333.89  Aligned_cols=250  Identities=23%  Similarity=0.295  Sum_probs=196.3

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +.+.||+|+||+||+|... .+++.+|+|++....   ......+.+|++++++++|+||+++++++.+.+..++||||+
T Consensus         5 ~~~~LG~G~~g~Vy~~~~~-~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~   83 (381)
T cd05626           5 KIKTLGIGAFGEVCLACKV-DTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYI   83 (381)
T ss_pred             EEEEEeecCCEEEEEEEEC-CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecC
Confidence            3568999999999999754 567899999987532   233467899999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC----
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS----  657 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~----  657 (792)
                      ++|+|.+++.....+++.....++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++.+.....    
T Consensus        84 ~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~  160 (381)
T cd05626          84 PGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYY  160 (381)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccc
Confidence            9999999998878889999999999999999999998   999999999999999999999999999864321100    


Q ss_pred             ------------------------------------------CccccccccCCcccccccccCCCCcccceehHHHHHHH
Q 003836          658 ------------------------------------------HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLE  695 (792)
Q Consensus       658 ------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~e  695 (792)
                                                                .......||+.|+|||.+.+..++.++|||||||++||
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~e  240 (381)
T cd05626         161 QKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFE  240 (381)
T ss_pred             cccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHH
Confidence                                                      00123469999999999998899999999999999999


Q ss_pred             HHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHH--ccccCCCCCCCHHhHHHH
Q 003836          696 IICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFW--CIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       696 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--Cl~~~p~~RPs~~evl~~  772 (792)
                      |++|+.||..............+              ............+.++.+++.+  |+..+|..||+++|+++.
T Consensus       241 lltG~~Pf~~~~~~~~~~~i~~~--------------~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h  305 (381)
T cd05626         241 MLVGQPPFLAPTPTETQLKVINW--------------ENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAH  305 (381)
T ss_pred             HHhCCCCCcCCCHHHHHHHHHcc--------------ccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence            99999999754322111100000              0001111111234566677766  566777779999999875

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=3e-36  Score=325.51  Aligned_cols=243  Identities=23%  Similarity=0.336  Sum_probs=197.1

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEEEecc
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.||+|+||.||+|... .+++.+|+|++....   ......+..|.+++..+ +||||+++++++.+.+..++||||++
T Consensus         1 ~~lG~G~~g~Vy~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~   79 (321)
T cd05591           1 KVLGKGSFGKVMLAELK-GTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVN   79 (321)
T ss_pred             CccccCCCeEEEEEEEC-CCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCC
Confidence            36999999999999754 456789999987532   23345677888888866 79999999999999999999999999


Q ss_pred             CCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          583 NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       583 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      +|+|..++.....+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++...... .....
T Consensus        80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~-~~~~~  155 (321)
T cd05591          80 GGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG-VTTTT  155 (321)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCC-ccccc
Confidence            999999998878899999999999999999999998   99999999999999999999999999987643222 22234


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCH
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV  742 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  742 (792)
                      ..||+.|+|||++.+..++.++|||||||++|||++|+.||........   .             ..+.....  ..+.
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~---~-------------~~i~~~~~--~~p~  217 (321)
T cd05591         156 FCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDL---F-------------ESILHDDV--LYPV  217 (321)
T ss_pred             cccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHH---H-------------HHHHcCCC--CCCC
Confidence            5689999999999999999999999999999999999999975432211   0             00111100  1122


Q ss_pred             HHHHHHHHHHHHccccCCCCCC-------CHHhHHHH
Q 003836          743 TMLHRFVMVAFWCIQEDPSHRP-------TMRKVTQM  772 (792)
Q Consensus       743 ~~~~~l~~l~~~Cl~~~p~~RP-------s~~evl~~  772 (792)
                      ....++.+++..||+.+|++||       +++++++.
T Consensus       218 ~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h  254 (321)
T cd05591         218 WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH  254 (321)
T ss_pred             CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence            2346788999999999999999       78888754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=7.4e-37  Score=331.67  Aligned_cols=250  Identities=21%  Similarity=0.251  Sum_probs=200.5

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      .+.+.||+|+||+||++... .+++.+|+|+++...   ....+.+.+|+.++++++|+||+++++++.+.+..++||||
T Consensus         4 ~~~~~lg~G~~g~Vy~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~   82 (330)
T cd05601           4 DVKSLVGRGHFGEVQVVREK-ATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEY   82 (330)
T ss_pred             eEEEEEEeccCEEEEEEEEC-CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECC
Confidence            35578999999999999754 456799999987542   23456788999999999999999999999999999999999


Q ss_pred             ccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          581 MSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       581 ~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      +++|+|.+++... ..+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++.........
T Consensus        83 ~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~  159 (330)
T cd05601          83 QPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVN  159 (330)
T ss_pred             CCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCCCCcee
Confidence            9999999999776 6789999999999999999999998   99999999999999999999999999998765443333


Q ss_pred             cccccccCCcccccccc------cCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhh
Q 003836          660 NTAIRGTKGYVAPEWFR------NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVE  733 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~------~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  733 (792)
                      .....||+.|+|||++.      ...++.++|||||||++|||++|+.||...........+       ...       .
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i-------~~~-------~  225 (330)
T cd05601         160 SKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNI-------MNF-------Q  225 (330)
T ss_pred             eecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHH-------HcC-------C
Confidence            33456899999999986      456789999999999999999999999754322110000       000       0


Q ss_pred             chhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          734 NDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       734 ~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ...........+..+.+++..||+ +|.+||+++++++.
T Consensus       226 ~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h  263 (330)
T cd05601         226 RFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH  263 (330)
T ss_pred             CccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence            001111112345678889999998 99999999999864

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=3.1e-36  Score=320.60  Aligned_cols=263  Identities=21%  Similarity=0.298  Sum_probs=192.9

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccc--cchHHHHHHHHHhccc---CCCCcccccceec-----cCC
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ--DSEKEFKAEVNGIGQT---HHKNLVRLLGYCD-----EGQ  572 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l---~h~niv~l~g~~~-----~~~  572 (792)
                      +.+.+.||+|+||.||++.....+++.||+|+++....  .....+.+|+.+++++   +||||++++++|.     ...
T Consensus         3 Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~   82 (290)
T cd07862           3 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET   82 (290)
T ss_pred             cceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCC
Confidence            34567899999999999976444567899998865322  2234566777776665   6999999999884     345


Q ss_pred             ceEEEEEeccCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCc
Q 003836          573 NRLLVYEFMSNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK  650 (792)
Q Consensus       573 ~~~lV~E~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~  650 (792)
                      ..++||||++ ++|.+++...  ..+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++
T Consensus        83 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~  158 (290)
T cd07862          83 KLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR  158 (290)
T ss_pred             cEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccccceE
Confidence            6899999997 5898888653  4578999999999999999999998   99999999999999999999999999998


Q ss_pred             cccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHH----Hhhccc
Q 003836          651 LLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAY----DRYQER  726 (792)
Q Consensus       651 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~----~~~~~~  726 (792)
                      .....  .......|++.|+|||.+.+..++.++|||||||++|||++|+.||...........+.....    ..+...
T Consensus       159 ~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~  236 (290)
T cd07862         159 IYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD  236 (290)
T ss_pred             eccCC--cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhh
Confidence            65432  223345689999999999888999999999999999999999999976543221111111000    000000


Q ss_pred             -ch-hHhhhchhc---ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          727 -TL-EALVENDLE---AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       727 -~~-~~~~~~~~~---~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                       .+ .........   ..........+.+++.+||+.+|++|||+.|+++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         237 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             hcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence             00 000000000   0001123456789999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=4e-36  Score=313.68  Aligned_cols=249  Identities=26%  Similarity=0.412  Sum_probs=199.6

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      ..+.+.||+|+||.||++...  ....+|+|++... .....++.+|++++++++|+||+++++++.+.+..++||||++
T Consensus         6 ~~~~~~lg~G~~~~v~~~~~~--~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd05059           6 LTFLKELGSGQFGVVHLGKWR--GKIDVAIKMIREG-AMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA   82 (256)
T ss_pred             cchhhhhccCCCceEEEeEec--CCccEEEEEeccC-CCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence            346688999999999999754  3457999998643 2234678899999999999999999999999999999999999


Q ss_pred             CCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          583 NGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       583 ~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      +++|.+++... ..+++..+..++.||+.||+|||+.   +++|+||||+||++++++.+||+|||+++...........
T Consensus        83 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~  159 (256)
T cd05059          83 NGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQ  159 (256)
T ss_pred             CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceecccccccccC
Confidence            99999999754 4678999999999999999999998   9999999999999999999999999999865432222222


Q ss_pred             cccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ...++..|+|||.+.+..++.++||||||+++|||++ |+.||........   .     ..         +........
T Consensus       160 ~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~---~-----~~---------~~~~~~~~~  222 (256)
T cd05059         160 GTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEV---V-----ES---------VSAGYRLYR  222 (256)
T ss_pred             CCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHH---H-----HH---------HHcCCcCCC
Confidence            2224567999999999999999999999999999999 7888864322110   0     00         011111112


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhc
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE  774 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~  774 (792)
                      +...+.++.+++.+||+.+|++|||++|+++.|.
T Consensus       223 ~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l~  256 (256)
T cd05059         223 PKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQLT  256 (256)
T ss_pred             CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence            2235667899999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=6.5e-36  Score=312.20  Aligned_cols=250  Identities=29%  Similarity=0.404  Sum_probs=201.1

Q ss_pred             hhcCccccceEEEeeecCCC--ceEEEEEEcccccc-cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          507 EELGRGAFGTVYKGFVNMGS--SNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~--~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      ++||+|+||.||+|+....+  ...+|+|.+..... ...+++.+|+.++++++|+||+++++++. .+..++||||+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence            46999999999999764433  36899999876543 34568999999999999999999999876 4568999999999


Q ss_pred             CCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc--c
Q 003836          584 GTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN--T  661 (792)
Q Consensus       584 gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~--~  661 (792)
                      ++|.+++.....+++..+..++.|++.||+|||+.   +++|+||||+|||++.++.+||+|||+++..........  .
T Consensus        80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~  156 (257)
T cd05060          80 GPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATT  156 (257)
T ss_pred             CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCccccccc
Confidence            99999998877899999999999999999999998   999999999999999999999999999987644332211  1


Q ss_pred             cccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ...++..|+|||.+.+..++.++||||||+++|||++ |+.||.......    +...             +........
T Consensus       157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~----~~~~-------------~~~~~~~~~  219 (257)
T cd05060         157 AGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAE----VIAM-------------LESGERLPR  219 (257)
T ss_pred             CccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHH----HHHH-------------HHcCCcCCC
Confidence            1224568999999998899999999999999999998 899986542210    0000             000011112


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      +...+..+.+++.+||+.+|++||++.++++.|+++.
T Consensus       220 ~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~  256 (257)
T cd05060         220 PEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP  256 (257)
T ss_pred             CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence            2334567889999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=3.4e-36  Score=324.16  Aligned_cols=242  Identities=23%  Similarity=0.335  Sum_probs=193.3

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcc-cCCCCcccccceeccCCceEEEEEecc
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQ-THHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~-l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.||+|+||.||+|... ++++.||+|+++...   ....+.+..|..++.. .+||||+++++++...+..++||||++
T Consensus         1 ~~lG~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~   79 (316)
T cd05592           1 KVLGKGSFGKVMLAELK-GTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLN   79 (316)
T ss_pred             CeeeeCCCeEEEEEEEC-CCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCC
Confidence            36999999999999764 456789999987532   2233455667777765 489999999999999999999999999


Q ss_pred             CCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          583 NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       583 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      +|+|..++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++...... .....
T Consensus        80 gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~~~~~  155 (316)
T cd05592          80 GGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-GKAST  155 (316)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-Ccccc
Confidence            999999998777899999999999999999999998   99999999999999999999999999998643322 22234


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCH
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV  742 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  742 (792)
                      ..||+.|+|||.+.+..++.++|||||||++|||++|+.||.......   ...             .+...  ....+.
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~---~~~-------------~i~~~--~~~~~~  217 (316)
T cd05592         156 FCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDE---LFD-------------SILND--RPHFPR  217 (316)
T ss_pred             ccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHH---HHH-------------HHHcC--CCCCCC
Confidence            568999999999999899999999999999999999999997543211   000             00000  111222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHH-hHHH
Q 003836          743 TMLHRFVMVAFWCIQEDPSHRPTMR-KVTQ  771 (792)
Q Consensus       743 ~~~~~l~~l~~~Cl~~~p~~RPs~~-evl~  771 (792)
                      ....++.+++.+||+.+|++||++. ++++
T Consensus       218 ~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05592         218 WISKEAKDCLSKLFERDPTKRLGVDGDIRQ  247 (316)
T ss_pred             CCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence            3456678899999999999999975 5543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=7.2e-36  Score=311.91  Aligned_cols=248  Identities=26%  Similarity=0.371  Sum_probs=197.8

Q ss_pred             hcCccccceEEEeeecC-CCceEEEEEEcccccc-cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCCC
Q 003836          508 ELGRGAFGTVYKGFVNM-GSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGT  585 (792)
Q Consensus       508 ~lG~G~~g~Vy~g~~~~-~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~gs  585 (792)
                      .||+|+||.||+|.+.. ..+..||+|++..... ...+.+.+|+.++++++|+||+++++++. ....++||||+++++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~   80 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP   80 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence            48999999999997653 2345799999876432 33467999999999999999999999885 457899999999999


Q ss_pred             ccccccC-CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc--cc
Q 003836          586 VASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN--TA  662 (792)
Q Consensus       586 L~~~l~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~--~~  662 (792)
                      |.+++.. ...+++..+.+++.||+.||+|||++   +++|+||||+|||++.++.+||+|||+++..........  ..
T Consensus        81 L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  157 (257)
T cd05115          81 LNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSA  157 (257)
T ss_pred             HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCC
Confidence            9999975 35789999999999999999999998   999999999999999999999999999986544332211  11


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCC
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN  741 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  741 (792)
                      ..++..|+|||.+....++.++||||||+++||+++ |+.||........                 ...+........+
T Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-----------------~~~~~~~~~~~~~  220 (257)
T cd05115         158 GKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEV-----------------MSFIEQGKRLDCP  220 (257)
T ss_pred             CCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHH-----------------HHHHHCCCCCCCC
Confidence            223578999999988889999999999999999996 9999865432110                 0111111112223


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          742 VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       742 ~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                      ...+.++.+++.+||+.+|++||++.+|.+.|+..
T Consensus       221 ~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         221 AECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence            34567888999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=2.6e-36  Score=320.87  Aligned_cols=263  Identities=19%  Similarity=0.268  Sum_probs=197.1

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +.+.++||+|+||+||+|... .+++.||+|+++... ......+.+|++++++++||||+++++++......++||||+
T Consensus         7 y~~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   85 (288)
T cd07871           7 YVKLDKLGEGTYATVFKGRSK-LTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYL   85 (288)
T ss_pred             ceEeeEEecCCCEEEEEEEEC-CCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCC
Confidence            344578999999999999754 456789999986533 233457889999999999999999999999999999999999


Q ss_pred             cCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          582 SNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       582 ~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      ++ +|.+++... ..+++..+..++.||+.||+|||+.   +|+||||||+|||+++++.+||+|||+++...... ...
T Consensus        86 ~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~-~~~  160 (288)
T cd07871          86 DS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVPT-KTY  160 (288)
T ss_pred             Cc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCCC-ccc
Confidence            85 898888654 4578899999999999999999998   99999999999999999999999999997653222 122


Q ss_pred             ccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH----HHHhhcc----cchhHh
Q 003836          661 TAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW----AYDRYQE----RTLEAL  731 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~----~~~~~~~----~~~~~~  731 (792)
                      ....+++.|+|||.+.+ ..++.++|||||||++|||++|+.||...............    ....+..    ......
T Consensus       161 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (288)
T cd07871         161 SNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSY  240 (288)
T ss_pred             cCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhcc
Confidence            33457899999998865 56899999999999999999999999654332211111000    0000000    000111


Q ss_pred             hhchhccc----CCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          732 VENDLEAM----NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       732 ~~~~~~~~----~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ..+.....    .......++.+++.+||+.||.+|||++|+++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         241 LFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             ccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            11110000    01123456789999999999999999999986

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=2.8e-36  Score=326.55  Aligned_cols=250  Identities=22%  Similarity=0.301  Sum_probs=196.3

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEEEecc
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.||+|+||.||++... .+++.+|+|++++..   ....+.+.+|+.++.++ +||||+++++++...+..++||||++
T Consensus         1 ~~lG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~   79 (329)
T cd05618           1 RVIGRGSYAKVLLVRLK-KTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN   79 (329)
T ss_pred             CeeeeCCCeEEEEEEEC-CCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCC
Confidence            36999999999999754 456789999987532   22345678899888776 89999999999999999999999999


Q ss_pred             CCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          583 NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       583 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      +|+|..++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++...... .....
T Consensus        80 ~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~-~~~~~  155 (329)
T cd05618          80 GGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG-DTTST  155 (329)
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCC-Ccccc
Confidence            999999988778899999999999999999999998   99999999999999999999999999997543222 22234


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhh-hhhHHHHHHHhhcccchhHhhhchhcccCC
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVD-KAILTDWAYDRYQERTLEALVENDLEAMNN  741 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  741 (792)
                      ..||+.|+|||++.+..++.++|||||||++|||++|+.||........ ......+....        +....  ...+
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~--------i~~~~--~~~p  225 (329)
T cd05618         156 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV--------ILEKQ--IRIP  225 (329)
T ss_pred             ccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHH--------HhcCC--CCCC
Confidence            5689999999999999999999999999999999999999953211100 00000111111        11111  1123


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCC------HHhHHH
Q 003836          742 VTMLHRFVMVAFWCIQEDPSHRPT------MRKVTQ  771 (792)
Q Consensus       742 ~~~~~~l~~l~~~Cl~~~p~~RPs------~~evl~  771 (792)
                      ......+.+++.+||+.||++||+      +.++++
T Consensus       226 ~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~  261 (329)
T cd05618         226 RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG  261 (329)
T ss_pred             CCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhc
Confidence            344567889999999999999998      466654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=3.7e-36  Score=316.11  Aligned_cols=254  Identities=24%  Similarity=0.439  Sum_probs=202.9

Q ss_pred             hhhhhcCccccceEEEeeecCCC--ceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGS--SNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~--~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      ...+.||+|+||.||+|......  ...+++|++.... ....+++.+|++++++++|+||+++++++.+.+..++||||
T Consensus         8 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   87 (268)
T cd05063           8 TKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEY   87 (268)
T ss_pred             eEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEc
Confidence            34578999999999999875332  2479999987543 33456789999999999999999999999999999999999


Q ss_pred             ccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          581 MSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       581 ~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      +++++|.+++... ..+++..+..++.|++.||+|||+.   +++|+||||+||++++++.+||+|||++..........
T Consensus        88 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~  164 (268)
T cd05063          88 MENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGT  164 (268)
T ss_pred             CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceecccccccc
Confidence            9999999999764 5689999999999999999999998   99999999999999999999999999998764332222


Q ss_pred             cc--cccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          660 NT--AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       660 ~~--~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                      ..  ....+..|+|||.+....++.++||||||+++|||++ |+.||........   .     ..         +....
T Consensus       165 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~---~-----~~---------i~~~~  227 (268)
T cd05063         165 YTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEV---M-----KA---------INDGF  227 (268)
T ss_pred             eeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHH---H-----HH---------HhcCC
Confidence            11  1223457999999998889999999999999999997 9999864322100   0     00         00111


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      ........+..+.+++.+||+.+|++||++.+|++.|++++
T Consensus       228 ~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~~  268 (268)
T cd05063         228 RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKLL  268 (268)
T ss_pred             CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence            11112234567889999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=4.7e-36  Score=317.56  Aligned_cols=252  Identities=25%  Similarity=0.386  Sum_probs=202.1

Q ss_pred             hhhhhcCccccceEEEeee----cCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          504 GFKEELGRGAFGTVYKGFV----NMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~----~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      .+.++||+|+||.||++..    +...+..+++|.+........+.+.+|++++++++|+||+++++++.+....++|||
T Consensus         8 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   87 (280)
T cd05092           8 VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFE   87 (280)
T ss_pred             eeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEe
Confidence            3467899999999999864    233456899999887666667789999999999999999999999999999999999


Q ss_pred             eccCCCccccccCC---------------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEe
Q 003836          580 FMSNGTVASFLFGD---------------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARIS  644 (792)
Q Consensus       580 ~~~~gsL~~~l~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~  644 (792)
                      |+++++|.+++...               ..+++..+..++.||+.||+|||+.   +++|+||||+|||+++++.+||+
T Consensus        88 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~~~kL~  164 (280)
T cd05092          88 YMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGLVVKIG  164 (280)
T ss_pred             cCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCCCEEEC
Confidence            99999999998653               2478899999999999999999998   99999999999999999999999


Q ss_pred             ecCCCccccCCCCC-ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHh
Q 003836          645 DFGLAKLLTLDQSH-TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDR  722 (792)
Q Consensus       645 Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~  722 (792)
                      |||+++........ ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||.........          
T Consensus       165 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~----------  234 (280)
T cd05092         165 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAI----------  234 (280)
T ss_pred             CCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHH----------
Confidence            99999765432211 1122335678999999999999999999999999999998 88888543221110          


Q ss_pred             hcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhcc
Q 003836          723 YQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEG  775 (792)
Q Consensus       723 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~  775 (792)
                            .... .......+...+..+.+++.+||+.+|.+||+++||++.|++
T Consensus       235 ------~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~  280 (280)
T cd05092         235 ------ECIT-QGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA  280 (280)
T ss_pred             ------HHHH-cCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence                  0000 101111122345668899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=3.7e-36  Score=332.17  Aligned_cols=256  Identities=22%  Similarity=0.340  Sum_probs=200.9

Q ss_pred             hhhhhhcCccccceEEEeeecC----CCceEEEEEEccccccc-chHHHHHHHHHhcccC-CCCcccccceeccCCceEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNM----GSSNHVAVKKLNSVFQD-SEKEFKAEVNGIGQTH-HKNLVRLLGYCDEGQNRLL  576 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~----~~~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~-h~niv~l~g~~~~~~~~~l  576 (792)
                      ..+.+.||+|+||.||+|....    ...+.||+|+++..... ..+.+.+|++++.++. ||||++++++|...+..++
T Consensus        39 ~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~i  118 (401)
T cd05107          39 LVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYI  118 (401)
T ss_pred             eehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEE
Confidence            3345789999999999997642    23468999999764333 2357889999999997 9999999999999999999


Q ss_pred             EEEeccCCCccccccCCC--------------------------------------------------------------
Q 003836          577 VYEFMSNGTVASFLFGDS--------------------------------------------------------------  594 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~~--------------------------------------------------------------  594 (792)
                      |+||+++|+|.++++...                                                              
T Consensus       119 v~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (401)
T cd05107         119 ITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGT  198 (401)
T ss_pred             EEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhh
Confidence            999999999999885421                                                              


Q ss_pred             ------------------------------------CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC
Q 003836          595 ------------------------------------KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH  638 (792)
Q Consensus       595 ------------------------------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~  638 (792)
                                                          .+++..+..++.||+.||+|||+.   +|+||||||+|||++++
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~NiLl~~~  275 (401)
T cd05107         199 VKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNVLICEG  275 (401)
T ss_pred             hhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcceEEEeCC
Confidence                                                245667788999999999999998   99999999999999999


Q ss_pred             CCeEEeecCCCccccCCCCC-ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHH
Q 003836          639 YNARISDFGLAKLLTLDQSH-TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILT  716 (792)
Q Consensus       639 ~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~  716 (792)
                      +.+||+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||........   . 
T Consensus       276 ~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~---~-  351 (401)
T cd05107         276 KLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ---F-  351 (401)
T ss_pred             CEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH---H-
Confidence            99999999999865432221 1222346788999999998889999999999999999998 8888854321110   0 


Q ss_pred             HHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          717 DWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                                  ...+........+...+.++.+++.+||+.+|.+||+++||++.|++++
T Consensus       352 ------------~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~  400 (401)
T cd05107         352 ------------YNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL  400 (401)
T ss_pred             ------------HHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence                        0111111111122234567899999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=4e-36  Score=331.95  Aligned_cols=258  Identities=19%  Similarity=0.229  Sum_probs=196.3

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.++||+|+||.||++.. ..+++.||+|+..      ...+.+|++++++++||||+++++++......++|+|++.
T Consensus        94 y~~~~~lg~G~~g~V~~~~d-~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~  166 (391)
T PHA03212         94 FSILETFTPGAEGFAFACID-NKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK  166 (391)
T ss_pred             cEEEEEEcCCCCeEEEEEEE-CCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC
Confidence            44567899999999999965 4567789999753      2457899999999999999999999999999999999996


Q ss_pred             CCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          583 NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       583 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                       ++|..++.....+++..++.++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++............
T Consensus       167 -~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~  242 (391)
T PHA03212        167 -TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYG  242 (391)
T ss_pred             -CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccccccccccccccc
Confidence             68888887777889999999999999999999998   99999999999999999999999999997643322233334


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhh----hhhhHHHHHHH------hhc---ccchh
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKV----DKAILTDWAYD------RYQ---ERTLE  729 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~----~~~~~~~~~~~------~~~---~~~~~  729 (792)
                      ..||+.|+|||++.+..++.++|||||||++|||++|+.|+.......    ....+......      .+.   ...+.
T Consensus       243 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~  322 (391)
T PHA03212        243 WAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLD  322 (391)
T ss_pred             ccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHH
Confidence            579999999999999999999999999999999999998874321100    00000000000      000   00001


Q ss_pred             Hhh----hchhcc-------cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          730 ALV----ENDLEA-------MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       730 ~~~----~~~~~~-------~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .+.    ......       ......+.++.+++.+||+.||++|||++|+++
T Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~  375 (391)
T PHA03212        323 EIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD  375 (391)
T ss_pred             HHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence            000    000000       001134567889999999999999999999986

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=3.4e-36  Score=318.07  Aligned_cols=254  Identities=24%  Similarity=0.390  Sum_probs=198.3

Q ss_pred             HhhhhhhcCccccceEEEeeec----CCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEE
Q 003836          502 TRGFKEELGRGAFGTVYKGFVN----MGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLL  576 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~----~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~l  576 (792)
                      .+.+.+.||+|+||.||+|...    ...+..+|+|++.... .....++.+|+.+++.++|+||+++++++.+....++
T Consensus         7 ~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~l   86 (277)
T cd05062           7 KITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV   86 (277)
T ss_pred             HceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEE
Confidence            3455678999999999998653    2334679999986432 2334578999999999999999999999999999999


Q ss_pred             EEEeccCCCccccccCC----------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeec
Q 003836          577 VYEFMSNGTVASFLFGD----------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDF  646 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~----------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Df  646 (792)
                      ||||+++++|.+++...          ..+++..+..++.|++.||+|||+.   +++|+||||+|||+++++.+||+||
T Consensus        87 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~l~df  163 (277)
T cd05062          87 IMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDF  163 (277)
T ss_pred             EEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEEECCC
Confidence            99999999999998642          2356788899999999999999998   9999999999999999999999999


Q ss_pred             CCCccccCCCCC-ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhc
Q 003836          647 GLAKLLTLDQSH-TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQ  724 (792)
Q Consensus       647 g~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~  724 (792)
                      |+++........ ......+++.|+|||.+.+..++.++|||||||++|||++ |..||........   .     ....
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~---~-----~~~~  235 (277)
T cd05062         164 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQV---L-----RFVM  235 (277)
T ss_pred             CCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH---H-----HHHH
Confidence            999765432221 1112335778999999998899999999999999999999 6778754322110   0     0000


Q ss_pred             ccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhcc
Q 003836          725 ERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEG  775 (792)
Q Consensus       725 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~  775 (792)
                      +..         ....+...+..+.+++.+||+.+|++|||+.|++++|++
T Consensus       236 ~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~  277 (277)
T cd05062         236 EGG---------LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE  277 (277)
T ss_pred             cCC---------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence            000         001122344578899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=3.7e-36  Score=321.21  Aligned_cols=257  Identities=24%  Similarity=0.392  Sum_probs=201.4

Q ss_pred             hhhhhcCccccceEEEeeecCCC-ceEEEEEEccccc-ccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEEEe
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGS-SNHVAVKKLNSVF-QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~-~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      .+.+.||+|+||.||+|...... ...+++|.++... ....+.+.+|++++.++ +||||+++++++.+....++|+||
T Consensus         5 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~   84 (297)
T cd05089           5 KFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEY   84 (297)
T ss_pred             eeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEe
Confidence            45678999999999999775432 2357888887532 33456789999999999 799999999999999999999999


Q ss_pred             ccCCCccccccCC----------------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEe
Q 003836          581 MSNGTVASFLFGD----------------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARIS  644 (792)
Q Consensus       581 ~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~  644 (792)
                      +++++|.+++...                ..+++..+..++.|++.||+|||+.   +|+||||||+|||+++++.+||+
T Consensus        85 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~  161 (297)
T cd05089          85 APYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLASKIA  161 (297)
T ss_pred             cCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCeEEEC
Confidence            9999999998643                2477889999999999999999998   99999999999999999999999


Q ss_pred             ecCCCccccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhh
Q 003836          645 DFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRY  723 (792)
Q Consensus       645 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~  723 (792)
                      |||++......  ........+..|+|||.+....++.++|||||||++|||++ |+.||........   .     .. 
T Consensus       162 dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~---~-----~~-  230 (297)
T cd05089         162 DFGLSRGEEVY--VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAEL---Y-----EK-  230 (297)
T ss_pred             CcCCCccccce--eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH---H-----HH-
Confidence            99998643211  11111223557999999988889999999999999999997 9999865432110   0     00 


Q ss_pred             cccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCCCCC
Q 003836          724 QERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPIP  782 (792)
Q Consensus       724 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~~~p  782 (792)
                              +........+...+..+.+++.+||+.+|.+||+++++++.|+.+++...+
T Consensus       231 --------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~  281 (297)
T cd05089         231 --------LPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKA  281 (297)
T ss_pred             --------HhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence                    111111112223456788999999999999999999999999888765443

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=3.6e-36  Score=327.44  Aligned_cols=264  Identities=20%  Similarity=0.296  Sum_probs=196.2

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccC-----CceEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEG-----QNRLL  576 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~-----~~~~l  576 (792)
                      .+.++||+|+||.||+|.. ..+++.||||++....  ......+.+|++++++++||||+++++++...     ...++
T Consensus         3 ~i~~~lg~G~~g~V~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l   81 (338)
T cd07859           3 KIQEVIGKGSYGVVCSAID-THTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV   81 (338)
T ss_pred             EEEEEEeecCCeEEEEEEE-CCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence            4557899999999999975 3556799999987532  23345788999999999999999999988543     34799


Q ss_pred             EEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC
Q 003836          577 VYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~  656 (792)
                      ||||+. ++|.+++.....+++..+..++.||++||.|||+.   +|+||||||+|||++.++.+||+|||+++......
T Consensus        82 v~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~  157 (338)
T cd07859          82 VFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARVAFNDT  157 (338)
T ss_pred             EEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCcccccccccc
Confidence            999996 68999988777899999999999999999999998   99999999999999999999999999998653322


Q ss_pred             CC--ccccccccCCccccccccc--CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH-------HHHhhcc
Q 003836          657 SH--TNTAIRGTKGYVAPEWFRN--MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW-------AYDRYQE  725 (792)
Q Consensus       657 ~~--~~~~~~gt~~y~aPE~~~~--~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~-------~~~~~~~  725 (792)
                      ..  ......||+.|+|||++.+  ..++.++|||||||++|||++|+.||...............       .......
T Consensus       158 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  237 (338)
T cd07859         158 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRN  237 (338)
T ss_pred             CccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhh
Confidence            21  1233568999999999875  67899999999999999999999999654321110000000       0000000


Q ss_pred             cchhHhhhchhccc-C-----CHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          726 RTLEALVENDLEAM-N-----NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       726 ~~~~~~~~~~~~~~-~-----~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ......+....... .     .......+.+++.+||+.+|++|||++|+++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h  290 (338)
T cd07859         238 EKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD  290 (338)
T ss_pred             hhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence            11111111000000 0     01124567899999999999999999999974

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.3e-36  Score=289.71  Aligned_cols=242  Identities=25%  Similarity=0.349  Sum_probs=206.2

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +.+.||+|.||.||.|..+ .+...||+|++.+..   ...+.++.+|+++-..|+||||++++++|.+....||++||.
T Consensus        26 igr~LgkgkFG~vYlarek-ks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEya  104 (281)
T KOG0580|consen   26 IGRPLGKGKFGNVYLAREK-KSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEYA  104 (281)
T ss_pred             ccccccCCccccEeEeeec-cCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEEec
Confidence            4578999999999999754 456789999987642   334578999999999999999999999999999999999999


Q ss_pred             cCCCcccccc--CCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          582 SNGTVASFLF--GDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       582 ~~gsL~~~l~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      ++|+|...|.  ....+++.....++.|+|.||.|+|.+   +++||||||+|+|++..+..||+|||-+....   ...
T Consensus       105 ~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p---~~k  178 (281)
T KOG0580|consen  105 PRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SNK  178 (281)
T ss_pred             CCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeecC---CCC
Confidence            9999999998  456789999999999999999999998   99999999999999999999999999987543   344


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      ..+.+||.-|.+||...+..++.+.|+|++|++.||++.|..||.......-                ...+..-++  .
T Consensus       179 R~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~et----------------YkrI~k~~~--~  240 (281)
T KOG0580|consen  179 RKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSET----------------YKRIRKVDL--K  240 (281)
T ss_pred             ceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHH----------------HHHHHHccc--c
Confidence            4567899999999999999999999999999999999999999986642211                111111111  1


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ++...+..+.+++.+|+..+|.+|.+..|++.
T Consensus       241 ~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~  272 (281)
T KOG0580|consen  241 FPSTISGGAADLISRLLVKNPIERLALTEVMD  272 (281)
T ss_pred             CCcccChhHHHHHHHHhccCccccccHHHHhh
Confidence            23456678889999999999999999999987

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=3.5e-36  Score=330.87  Aligned_cols=249  Identities=19%  Similarity=0.246  Sum_probs=198.8

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +.+.+.||+|+||.||++... .+++.+|+|++.+..   ......+.+|+.+++.++||||+++++++.+++..++|||
T Consensus        45 y~~~~~lg~G~~g~Vy~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~E  123 (370)
T cd05596          45 FDVIKVIGRGAFGEVQLVRHK-SSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVME  123 (370)
T ss_pred             cEEEEEEeeCCCEEEEEEEEC-CCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEc
Confidence            345578999999999999754 456789999986432   2334567899999999999999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      |+++|+|.+++... .+++.....++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++.........
T Consensus       124 y~~gg~L~~~l~~~-~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~  199 (370)
T cd05596         124 YMPGGDLVNLMSNY-DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVR  199 (370)
T ss_pred             CCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCccc
Confidence            99999999988653 577888899999999999999998   99999999999999999999999999998765433323


Q ss_pred             cccccccCCcccccccccC----CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          660 NTAIRGTKGYVAPEWFRNM----PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~----~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                      .....||+.|+|||.+.+.    .++.++|||||||++|||++|+.||........                ...+....
T Consensus       200 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~----------------~~~i~~~~  263 (370)
T cd05596         200 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT----------------YSKIMDHK  263 (370)
T ss_pred             CCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHH----------------HHHHHcCC
Confidence            3345699999999998653    478999999999999999999999975432111                01111110


Q ss_pred             --hcccCCHHHHHHHHHHHHHccccCCCC--CCCHHhHHHH
Q 003836          736 --LEAMNNVTMLHRFVMVAFWCIQEDPSH--RPTMRKVTQM  772 (792)
Q Consensus       736 --~~~~~~~~~~~~l~~l~~~Cl~~~p~~--RPs~~evl~~  772 (792)
                        +........+.++.+++..||+.+|.+  ||+++|+++.
T Consensus       264 ~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h  304 (370)
T cd05596         264 NSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH  304 (370)
T ss_pred             CcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence              111111234677889999999999987  9999999865

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=7.1e-36  Score=316.62  Aligned_cols=255  Identities=25%  Similarity=0.330  Sum_probs=201.2

Q ss_pred             HHhhhhhhcCccccceEEEeeecC----CCceEEEEEEccccccc-chHHHHHHHHHhcccCCCCcccccceeccCCceE
Q 003836          501 VTRGFKEELGRGAFGTVYKGFVNM----GSSNHVAVKKLNSVFQD-SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRL  575 (792)
Q Consensus       501 ~~~~~~~~lG~G~~g~Vy~g~~~~----~~~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~  575 (792)
                      ..+.+.++||+|+||.||+|....    ..++.||+|+++..... ....+.+|+.++.+++||||+++++++.+....+
T Consensus         5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~   84 (283)
T cd05091           5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS   84 (283)
T ss_pred             HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence            345667899999999999997642    23468999999754332 2456889999999999999999999999999999


Q ss_pred             EEEEeccCCCccccccCC----------------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCC
Q 003836          576 LVYEFMSNGTVASFLFGD----------------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY  639 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~  639 (792)
                      +++||+++++|.+++...                ..+++..+.+++.|++.||.|||+.   +|+||||||+|||+++++
T Consensus        85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~~  161 (283)
T cd05091          85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKL  161 (283)
T ss_pred             EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCCC
Confidence            999999999999998421                2467888899999999999999998   999999999999999999


Q ss_pred             CeEEeecCCCccccCCCCC-ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHH
Q 003836          640 NARISDFGLAKLLTLDQSH-TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTD  717 (792)
Q Consensus       640 ~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~  717 (792)
                      .+||+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |..||........      
T Consensus       162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~------  235 (283)
T cd05091         162 NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV------  235 (283)
T ss_pred             ceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHH------
Confidence            9999999998865432221 1222345778999999988889999999999999999998 7777754322100      


Q ss_pred             HHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhcc
Q 003836          718 WAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEG  775 (792)
Q Consensus       718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~  775 (792)
                                ...+... .....+...+..+.+++..||+.+|++||++.+|++.|+.
T Consensus       236 ----------~~~i~~~-~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         236 ----------IEMIRNR-QVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             ----------HHHHHcC-CcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence                      0011111 1111233456678899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=9.7e-36  Score=313.56  Aligned_cols=252  Identities=26%  Similarity=0.411  Sum_probs=199.2

Q ss_pred             hhhhcCccccceEEEeeecCC--CceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCc------e
Q 003836          505 FKEELGRGAFGTVYKGFVNMG--SSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQN------R  574 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~--~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~------~  574 (792)
                      +.+.||+|+||.||+|+....  ....+|+|+++...  ......+.+|++.++.++|+||+++++++.+.+.      .
T Consensus         3 ~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   82 (273)
T cd05035           3 LGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKP   82 (273)
T ss_pred             cccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCccc
Confidence            457899999999999987543  34689999987532  2334678999999999999999999998866554      7


Q ss_pred             EEEEEeccCCCccccccCC------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCC
Q 003836          575 LLVYEFMSNGTVASFLFGD------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGL  648 (792)
Q Consensus       575 ~lV~E~~~~gsL~~~l~~~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~  648 (792)
                      ++|+||+++|+|..++...      ..+++.....++.|++.||+|||+.   +++||||||+||++++++.+||+|||+
T Consensus        83 ~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~  159 (273)
T cd05035          83 MVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADFGL  159 (273)
T ss_pred             EEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCccc
Confidence            8999999999999988432      3578899999999999999999998   999999999999999999999999999


Q ss_pred             CccccCCCCCc-cccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhccc
Q 003836          649 AKLLTLDQSHT-NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQER  726 (792)
Q Consensus       649 a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~  726 (792)
                      ++......... .....++..|+|||.+....++.++||||||+++|||++ |..||.......   ..           
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~---~~-----------  225 (273)
T cd05035         160 SKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHE---IY-----------  225 (273)
T ss_pred             eeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH---HH-----------
Confidence            98764333221 112234678999999988899999999999999999999 788875432110   00           


Q ss_pred             chhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          727 TLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       727 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                        ..+. .......+...+..+.+++.+||+.||.+||++.|+++.|+++
T Consensus       226 --~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         226 --DYLR-HGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             --HHHH-cCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence              0001 1111112334566889999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=4e-36  Score=325.53  Aligned_cols=250  Identities=22%  Similarity=0.309  Sum_probs=197.3

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEEEecc
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.||+|+||.||++... .+++.||+|++++..   ....+.+.+|+.++.++ +||||+++++++.+.+..++||||++
T Consensus         1 ~~lG~G~~g~V~~~~~~-~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~   79 (329)
T cd05588           1 RVIGRGSYAKVLLVELK-KTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVS   79 (329)
T ss_pred             CeEeeCCCeEEEEEEEC-CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCC
Confidence            36899999999999754 456789999997532   22345688899999988 79999999999999999999999999


Q ss_pred             CCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          583 NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       583 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      +|+|..++.....+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++..... ......
T Consensus        80 ~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-~~~~~~  155 (329)
T cd05588          80 GGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP-GDTTST  155 (329)
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccC-CCcccc
Confidence            999999998778899999999999999999999998   9999999999999999999999999998753221 222234


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhh-hhhHHHHHHHhhcccchhHhhhchhcccCC
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVD-KAILTDWAYDRYQERTLEALVENDLEAMNN  741 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  741 (792)
                      ..||+.|+|||++.+..++.++|||||||++|||++|+.||+....... ......+...        .+.....  ..+
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~--------~~~~~~~--~~p  225 (329)
T cd05588         156 FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQ--------VILEKQI--RIP  225 (329)
T ss_pred             ccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHH--------HHHcCCC--CCC
Confidence            5689999999999999999999999999999999999999964221110 0000011111        1111111  112


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCC------HHhHHH
Q 003836          742 VTMLHRFVMVAFWCIQEDPSHRPT------MRKVTQ  771 (792)
Q Consensus       742 ~~~~~~l~~l~~~Cl~~~p~~RPs------~~evl~  771 (792)
                      ...+.++.+++.+||+.||.+||+      ++++++
T Consensus       226 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~  261 (329)
T cd05588         226 RSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS  261 (329)
T ss_pred             CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence            234567889999999999999997      667764

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=5.7e-36  Score=320.39  Aligned_cols=255  Identities=26%  Similarity=0.375  Sum_probs=203.2

Q ss_pred             hhhhhhcCccccceEEEeeec----CCCceEEEEEEccccc-ccchHHHHHHHHHhccc-CCCCcccccceeccCCceEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVN----MGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLL  576 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~----~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~l  576 (792)
                      ..+.+.||+|+||.||++...    ......+|+|+++... ....+.+.+|+.+++++ +|+||+++++++...+..++
T Consensus        37 ~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l  116 (302)
T cd05055          37 LSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILV  116 (302)
T ss_pred             eEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEE
Confidence            445678999999999998642    2344579999987543 23346789999999999 79999999999999999999


Q ss_pred             EEEeccCCCccccccCCC--CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccC
Q 003836          577 VYEFMSNGTVASFLFGDS--KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL  654 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~  654 (792)
                      ||||+++|+|.+++....  .+++.++..++.||+.||+|||+.   +|+|+||||+|||++.++.+||+|||+++....
T Consensus       117 v~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~  193 (302)
T cd05055         117 ITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGLARDIMN  193 (302)
T ss_pred             EEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCcccccccC
Confidence            999999999999997543  379999999999999999999998   999999999999999999999999999986643


Q ss_pred             CCCC-ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhh
Q 003836          655 DQSH-TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALV  732 (792)
Q Consensus       655 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  732 (792)
                      .... ......++..|+|||.+.+..++.++|||||||++|||++ |..||.........                ...+
T Consensus       194 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~----------------~~~~  257 (302)
T cd05055         194 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKF----------------YKLI  257 (302)
T ss_pred             CCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHH----------------HHHH
Confidence            3221 1122345778999999999999999999999999999998 88888654321110                0011


Q ss_pred             hchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          733 ENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       733 ~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                      ........+.....++.+++.+||+.+|++||++.|+++.|+++
T Consensus       258 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         258 KEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             HcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence            11111111223356789999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=1.1e-35  Score=325.39  Aligned_cols=245  Identities=24%  Similarity=0.350  Sum_probs=192.0

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccccc-cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      +.++||+|+||+||++... .+++.||||++..... ...+.+.+|++++++++|+||+++++++.+.+..++||||+++
T Consensus        78 ~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~  156 (353)
T PLN00034         78 RVNRIGSGAGGTVYKVIHR-PTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDG  156 (353)
T ss_pred             hhhhccCCCCeEEEEEEEC-CCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCC
Confidence            3568999999999999754 4567899999865432 3356789999999999999999999999999999999999999


Q ss_pred             CCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccccc
Q 003836          584 GTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAI  663 (792)
Q Consensus       584 gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  663 (792)
                      |+|....    ...+..+..++.||+.||+|||+.   +|+||||||+|||+++++.+||+|||+++....... .....
T Consensus       157 ~~L~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~-~~~~~  228 (353)
T PLN00034        157 GSLEGTH----IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD-PCNSS  228 (353)
T ss_pred             Ccccccc----cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceecccccc-ccccc
Confidence            9987643    346777889999999999999998   999999999999999999999999999987643221 22334


Q ss_pred             cccCCccccccccc-----CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          664 RGTKGYVAPEWFRN-----MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       664 ~gt~~y~aPE~~~~-----~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      .||..|+|||.+..     ...+.++|||||||++|||++|+.||..............              +......
T Consensus       229 ~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~--------------~~~~~~~  294 (353)
T PLN00034        229 VGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCA--------------ICMSQPP  294 (353)
T ss_pred             ccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHH--------------HhccCCC
Confidence            68999999998743     2345689999999999999999999973221111000000              0000111


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ..+.....++.+++.+||+.||++||++.|+++.
T Consensus       295 ~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h  328 (353)
T PLN00034        295 EAPATASREFRHFISCCLQREPAKRWSAMQLLQH  328 (353)
T ss_pred             CCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            1223445678999999999999999999999986

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=4.2e-36  Score=318.51  Aligned_cols=269  Identities=25%  Similarity=0.382  Sum_probs=202.6

Q ss_pred             hhhhhcCccccceEEEeee---cCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceecc--CCceEEEE
Q 003836          504 GFKEELGRGAFGTVYKGFV---NMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDE--GQNRLLVY  578 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~---~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~--~~~~~lV~  578 (792)
                      .+.+.||+|+||.||++..   ....++.||+|++........+.+.+|++++++++|+||+++++++..  ....++|+
T Consensus         7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   86 (284)
T cd05081           7 KFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVM   86 (284)
T ss_pred             eeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEE
Confidence            4457899999999999875   334567899999887655666789999999999999999999998743  34688999


Q ss_pred             EeccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC
Q 003836          579 EFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       579 E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      ||+++++|.+++... ..+++..+..++.|++.||+|||+.   +|+|+||||+|||+++++.+||+|||+++.......
T Consensus        87 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~  163 (284)
T cd05081          87 EYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKE  163 (284)
T ss_pred             EecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCcccccccCCCc
Confidence            999999999999764 4689999999999999999999998   999999999999999999999999999987643322


Q ss_pred             Cc--cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          658 HT--NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       658 ~~--~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                      ..  .....++..|+|||.+.+..++.++||||||++++||++|..++.............. .........+...+...
T Consensus       164 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  242 (284)
T cd05081         164 YYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGND-KQGQMIVYHLIELLKNN  242 (284)
T ss_pred             ceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccc-cccccchHHHHHHHhcC
Confidence            11  1112234569999999988999999999999999999998776543221100000000 00000000011122222


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                      .....+...+.++.+++.+||+.+|++|||+.||++.|+.+
T Consensus       243 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         243 GRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            22222233456789999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=5e-36  Score=322.81  Aligned_cols=241  Identities=23%  Similarity=0.335  Sum_probs=193.8

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEEEecc
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.||+|+||.||++... .+++.||+|+++...   ......+..|.+++... +|+||+++++++.+.+..++||||++
T Consensus         1 ~~lg~G~~g~V~~~~~~-~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~   79 (316)
T cd05620           1 KVLGKGSFGKVLLAELK-GKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLN   79 (316)
T ss_pred             CeeeeCCCeEEEEEEEC-CCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCC
Confidence            36999999999999754 456789999987532   23345667788887754 89999999999999999999999999


Q ss_pred             CCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          583 NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       583 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      +|+|..++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++..... ......
T Consensus        80 ~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~  155 (316)
T cd05620          80 GGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG-DNRAST  155 (316)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccC-CCceec
Confidence            999999998777889999999999999999999998   9999999999999999999999999998753221 122334


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCH
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV  742 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  742 (792)
                      ..||+.|+|||.+.+..++.++|||||||++|||++|+.||........   .     .        .+...  ....+.
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~---~-----~--------~~~~~--~~~~~~  217 (316)
T cd05620         156 FCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDEL---F-----E--------SIRVD--TPHYPR  217 (316)
T ss_pred             cCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH---H-----H--------HHHhC--CCCCCC
Confidence            5689999999999999999999999999999999999999965432110   0     0        00000  011122


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHH-hHH
Q 003836          743 TMLHRFVMVAFWCIQEDPSHRPTMR-KVT  770 (792)
Q Consensus       743 ~~~~~l~~l~~~Cl~~~p~~RPs~~-evl  770 (792)
                      ....++.+++.+||+.||++||++. +++
T Consensus       218 ~~~~~~~~li~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         218 WITKESKDILEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             CCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence            2456778899999999999999984 665

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=8.9e-36  Score=313.63  Aligned_cols=249  Identities=25%  Similarity=0.405  Sum_probs=196.1

Q ss_pred             hhcCccccceEEEeeecCCC-ceEEEEEEccccc-ccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEEEeccC
Q 003836          507 EELGRGAFGTVYKGFVNMGS-SNHVAVKKLNSVF-QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~-~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      +.||+|+||.||+|.+.... ...+++|.++... ....+.+.+|++++.++ +||||+++++++...+..++||||+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH   80 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence            36899999999999875432 2457889887532 34456889999999999 899999999999999999999999999


Q ss_pred             CCccccccCCC----------------CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecC
Q 003836          584 GTVASFLFGDS----------------KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFG  647 (792)
Q Consensus       584 gsL~~~l~~~~----------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg  647 (792)
                      |+|.+++....                .+++..+..++.|++.||+|||+.   +++|+||||+|||+++++.+||+|||
T Consensus        81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg  157 (270)
T cd05047          81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG  157 (270)
T ss_pred             CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCCC
Confidence            99999986432                467889999999999999999998   99999999999999999999999999


Q ss_pred             CCccccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhccc
Q 003836          648 LAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQER  726 (792)
Q Consensus       648 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~  726 (792)
                      +++.....  ........+..|+|||.+....++.++||||||++++||++ |+.||........   .     ..    
T Consensus       158 l~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~---~-----~~----  223 (270)
T cd05047         158 LSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL---Y-----EK----  223 (270)
T ss_pred             Cccccchh--hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHH---H-----HH----
Confidence            98632211  11111223567999999988889999999999999999997 9999864322100   0     00    


Q ss_pred             chhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          727 TLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       727 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                           +........+......+.+++.+||+.+|.+|||+.++++.|+.++
T Consensus       224 -----~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~  269 (270)
T cd05047         224 -----LPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  269 (270)
T ss_pred             -----HhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence                 0011111112233457889999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=1.2e-35  Score=314.44  Aligned_cols=245  Identities=26%  Similarity=0.326  Sum_probs=195.2

Q ss_pred             cCccccceEEEeeecCCCceEEEEEEcccccc---cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCCC
Q 003836          509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ---DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGT  585 (792)
Q Consensus       509 lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~gs  585 (792)
                      ||+|+||+||++... .+++.+|+|++.....   ...+.+..|++++++++|+||+++.+++......++||||+++|+
T Consensus         1 lg~G~~g~Vy~~~~~-~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~   79 (280)
T cd05608           1 LGKGGFGEVSACQMR-ATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGD   79 (280)
T ss_pred             CCCCCceeEEEEEEc-cCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCC
Confidence            799999999999654 4567899999865322   223567889999999999999999999999999999999999999


Q ss_pred             ccccccC----CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          586 VASFLFG----DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       586 L~~~l~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      |..++..    ...+++..+..++.||+.||+|||+.   +|+||||||+|||+++++.+||+|||+++....... ...
T Consensus        80 L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-~~~  155 (280)
T cd05608          80 LRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS-KTK  155 (280)
T ss_pred             HHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-ccc
Confidence            9887743    34688999999999999999999998   999999999999999999999999999986543322 223


Q ss_pred             cccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCC
Q 003836          662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN  741 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  741 (792)
                      ...|++.|+|||.+.+..++.++||||||+++|||++|+.||............            ...+....  ...+
T Consensus       156 ~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~------------~~~~~~~~--~~~~  221 (280)
T cd05608         156 GYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL------------KQRILNDS--VTYP  221 (280)
T ss_pred             ccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHH------------HHhhcccC--CCCc
Confidence            346899999999999999999999999999999999999999654321110000            00011110  1122


Q ss_pred             HHHHHHHHHHHHHccccCCCCCC-----CHHhHHHH
Q 003836          742 VTMLHRFVMVAFWCIQEDPSHRP-----TMRKVTQM  772 (792)
Q Consensus       742 ~~~~~~l~~l~~~Cl~~~p~~RP-----s~~evl~~  772 (792)
                      ...+..+.+++.+||+.+|++||     +++++++.
T Consensus       222 ~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h  257 (280)
T cd05608         222 DKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH  257 (280)
T ss_pred             ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence            34567788999999999999999     67778764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=9.9e-36  Score=311.39  Aligned_cols=254  Identities=28%  Similarity=0.415  Sum_probs=203.6

Q ss_pred             HHHHHhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEE
Q 003836          498 LVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLV  577 (792)
Q Consensus       498 l~~~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV  577 (792)
                      +....+++.++||+|+||.||+|...  .++.+|+|.+.... .....+.+|+.++++++|+||+++++++. .+..++|
T Consensus         3 ~~~~~~~~~~~ig~G~~g~v~~~~~~--~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v   78 (260)
T cd05067           3 VPRETLKLVKKLGAGQFGEVWMGYYN--GHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYII   78 (260)
T ss_pred             cchHHceeeeeeccCccceEEeeecC--CCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEE
Confidence            34556677889999999999999754  34679999987543 34568999999999999999999999874 4568999


Q ss_pred             EEeccCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCC
Q 003836          578 YEFMSNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD  655 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~  655 (792)
                      |||+++++|.+++...  ..+++.++..++.|++.||+|||+.   +++|+||||+||++++++.++|+|||++......
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~  155 (260)
T cd05067          79 TEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIEDN  155 (260)
T ss_pred             EEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCCC
Confidence            9999999999998653  4678899999999999999999998   9999999999999999999999999999876533


Q ss_pred             CCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhc
Q 003836          656 QSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEN  734 (792)
Q Consensus       656 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  734 (792)
                      .........++..|+|||.+....++.++||||||++++||++ |+.||.........                 ..+..
T Consensus       156 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~-----------------~~~~~  218 (260)
T cd05067         156 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVI-----------------QNLER  218 (260)
T ss_pred             CcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHH-----------------HHHHc
Confidence            3322233345778999999988889999999999999999999 99998644321100                 00111


Q ss_pred             hhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhcc
Q 003836          735 DLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEG  775 (792)
Q Consensus       735 ~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~  775 (792)
                      ......+...+.++.+++.+||+.+|++||+++++++.|+.
T Consensus       219 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         219 GYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence            11111222345678999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=1e-35  Score=311.65  Aligned_cols=251  Identities=27%  Similarity=0.425  Sum_probs=200.7

Q ss_pred             HhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .+.+.++||+|+||.||+|.... + ..||+|+++... ...+++.+|++++++++|+||+++++++.+ ...++||||+
T Consensus         7 ~~~~~~~lg~g~~~~v~~~~~~~-~-~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~   82 (262)
T cd05071           7 SLRLEVKLGQGCFGEVWMGTWNG-T-TRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM   82 (262)
T ss_pred             HeeEeeecCCCCCCcEEEEEecC-C-ceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcC
Confidence            35667889999999999997643 2 469999997532 345679999999999999999999998754 5578999999


Q ss_pred             cCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          582 SNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       582 ~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      ++|+|.+++...  ..+++..+..++.|+++||+|||+.   +++|+||||+||++++++.+||+|||.++.........
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~  159 (262)
T cd05071          83 SKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA  159 (262)
T ss_pred             CCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeecccccccc
Confidence            999999999753  4578999999999999999999998   99999999999999999999999999998765433222


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      .....++..|+|||.+.+..++.++||||||+++|||++ |+.||........   .     ..         +......
T Consensus       160 ~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~---~-----~~---------~~~~~~~  222 (262)
T cd05071         160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV---L-----DQ---------VERGYRM  222 (262)
T ss_pred             ccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHH---H-----HH---------HhcCCCC
Confidence            223346778999999988899999999999999999999 7778764422110   0     00         0001111


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                      ..+...+..+.+++.+|++.+|++||++.++++.|+..
T Consensus       223 ~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         223 PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  260 (262)
T ss_pred             CCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence            12334566788999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3e-36  Score=331.51  Aligned_cols=249  Identities=20%  Similarity=0.266  Sum_probs=197.6

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +.+.||+|+||+||++... .+++.||||++....   ......+.+|+.+++.++|+||+++++++.+++..++||||+
T Consensus         5 ~~~~lG~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~   83 (364)
T cd05599           5 SIKVIGRGAFGEVRLVQKK-DTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYL   83 (364)
T ss_pred             EEEEEEecCCEEEEEEEEC-CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCC
Confidence            4578999999999999754 456789999997532   233456889999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC---
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH---  658 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~---  658 (792)
                      ++|+|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++.+......   
T Consensus        84 ~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~  160 (364)
T cd05599          84 PGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFY  160 (364)
T ss_pred             CCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceecccccccccc
Confidence            9999999998878899999999999999999999998   9999999999999999999999999998765322110   


Q ss_pred             ----------------------------------ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCC
Q 003836          659 ----------------------------------TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNID  704 (792)
Q Consensus       659 ----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~  704 (792)
                                                        ......||+.|+|||++....++.++|||||||++|||++|+.||.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~  240 (364)
T cd05599         161 RILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFC  240 (364)
T ss_pred             ccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCC
Confidence                                              0112458999999999999999999999999999999999999997


Q ss_pred             cchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCC---HHhHHHH
Q 003836          705 NEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPT---MRKVTQM  772 (792)
Q Consensus       705 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs---~~evl~~  772 (792)
                      ..........+..     +.         ..+........++.+.+++.+|+. +|.+|++   ++|+++.
T Consensus       241 ~~~~~~~~~~i~~-----~~---------~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h  296 (364)
T cd05599         241 SDNPQETYRKIIN-----WK---------ETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH  296 (364)
T ss_pred             CCCHHHHHHHHHc-----CC---------CccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence            5432211000000     00         000000111234567788888996 8999998   8888764

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=6.2e-36  Score=322.52  Aligned_cols=243  Identities=24%  Similarity=0.333  Sum_probs=197.4

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEEEecc
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.||+|+||+||++... .+++.+|+|++++..   ......+.+|+++++.+ +||||+++++++...+..++||||++
T Consensus         1 ~~lG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~   79 (318)
T cd05570           1 KVLGKGSFGKVLLAELK-GTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVN   79 (318)
T ss_pred             CeeeeCCCeEEEEEEEC-CCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCC
Confidence            36999999999999764 456789999987532   23345677888888887 79999999999999999999999999


Q ss_pred             CCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          583 NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       583 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      +|+|..++.....+++..+..++.||+.||+|||+.   +|+||||||+|||+++++.+||+|||+++....... ....
T Consensus        80 ~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-~~~~  155 (318)
T cd05570          80 GGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV-TTST  155 (318)
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCCC-cccc
Confidence            999999998877899999999999999999999998   999999999999999999999999999875322221 2233


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCH
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV  742 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  742 (792)
                      ..|++.|+|||.+.+..++.++|||||||++|||++|+.||........   .     .        .+....  ...+.
T Consensus       156 ~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~---~-----~--------~i~~~~--~~~~~  217 (318)
T cd05570         156 FCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDEL---F-----Q--------SILEDE--VRYPR  217 (318)
T ss_pred             eecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHH---H-----H--------HHHcCC--CCCCC
Confidence            4689999999999999999999999999999999999999965432110   0     0        000000  11122


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCH-----HhHHHH
Q 003836          743 TMLHRFVMVAFWCIQEDPSHRPTM-----RKVTQM  772 (792)
Q Consensus       743 ~~~~~l~~l~~~Cl~~~p~~RPs~-----~evl~~  772 (792)
                      ..+..+.+++.+||+.||.+||++     .++++.
T Consensus       218 ~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~  252 (318)
T cd05570         218 WLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH  252 (318)
T ss_pred             cCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence            345678899999999999999999     887753

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=5.4e-36  Score=329.07  Aligned_cols=198  Identities=25%  Similarity=0.322  Sum_probs=172.5

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +.+.||+|+||+||++... .+++.+|+|++.+..   ......+.+|+.++.+++|+||+++++.+.+....++||||+
T Consensus         5 ~~~~LG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~   83 (363)
T cd05628           5 SLKVIGRGAFGEVRLVQKK-DTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFL   83 (363)
T ss_pred             EeEEEEeCCCEEEEEEEEC-CCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCC
Confidence            4578999999999999653 456799999987532   223456888999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC----
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS----  657 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~----  657 (792)
                      ++|+|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++.......    
T Consensus        84 ~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~  160 (363)
T cd05628          84 PGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFY  160 (363)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCccccccccccccc
Confidence            9999999998888899999999999999999999998   999999999999999999999999999976432110    


Q ss_pred             ------------------------------CccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcc
Q 003836          658 ------------------------------HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNE  706 (792)
Q Consensus       658 ------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~  706 (792)
                                                    .......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~  239 (363)
T cd05628         161 RNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSE  239 (363)
T ss_pred             ccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCC
Confidence                                          0012346999999999999999999999999999999999999999754

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=1.9e-36  Score=326.69  Aligned_cols=240  Identities=22%  Similarity=0.243  Sum_probs=195.3

Q ss_pred             hhcCccccceEEEeeec--CCCceEEEEEEcccccc--cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          507 EELGRGAFGTVYKGFVN--MGSSNHVAVKKLNSVFQ--DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~--~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.||+|+||.||++...  ...++.+|+|++.....  .....+.+|++++++++||||+++++++.+.+..++||||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            46999999999998642  24567899999875322  234567889999999999999999999999999999999999


Q ss_pred             CCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          583 NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       583 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      +|+|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||+++++.+||+|||+++...... .....
T Consensus        82 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-~~~~~  157 (318)
T cd05582          82 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-KKAYS  157 (318)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC-Cceec
Confidence            999999998777899999999999999999999998   99999999999999999999999999998654322 22234


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCH
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV  742 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  742 (792)
                      ..|++.|+|||.+.+..++.++|||||||++|||++|+.||........   .             ..+....  ...+.
T Consensus       158 ~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~---~-------------~~i~~~~--~~~p~  219 (318)
T cd05582         158 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKET---M-------------TMILKAK--LGMPQ  219 (318)
T ss_pred             ccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHH---H-------------HHHHcCC--CCCCC
Confidence            5689999999999988899999999999999999999999975422110   0             0011111  01122


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHh
Q 003836          743 TMLHRFVMVAFWCIQEDPSHRPTMRK  768 (792)
Q Consensus       743 ~~~~~l~~l~~~Cl~~~p~~RPs~~e  768 (792)
                      .....+.+++.+||+.||++||++.+
T Consensus       220 ~~~~~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         220 FLSPEAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             CCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence            34567789999999999999999655

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=4.3e-36  Score=321.58  Aligned_cols=253  Identities=26%  Similarity=0.406  Sum_probs=197.9

Q ss_pred             hhhhhhcCccccceEEEeeecCC-CceEEEEEEccccc-ccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMG-SSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +.+.+.||+|+||.||+|..... ....+++|++.... ......+.+|++++.++ +|+||+++++++.+.+..++|||
T Consensus         9 ~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e   88 (303)
T cd05088           9 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIE   88 (303)
T ss_pred             ceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEE
Confidence            44567899999999999986532 23457888876532 33456789999999999 89999999999999999999999


Q ss_pred             eccCCCccccccCC----------------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEE
Q 003836          580 FMSNGTVASFLFGD----------------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARI  643 (792)
Q Consensus       580 ~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl  643 (792)
                      |+++++|.+++...                ..+++..++.++.||+.||+|||+.   +|+||||||+|||+++++.+||
T Consensus        89 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~~~kl  165 (303)
T cd05088          89 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKI  165 (303)
T ss_pred             eCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCCcEEe
Confidence            99999999998643                2467889999999999999999998   9999999999999999999999


Q ss_pred             eecCCCccccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHh
Q 003836          644 SDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDR  722 (792)
Q Consensus       644 ~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~  722 (792)
                      +|||+++......  ......++..|+|||.+.+..++.++|||||||+++||+| |..||........   .     ..
T Consensus       166 ~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~---~-----~~  235 (303)
T cd05088         166 ADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL---Y-----EK  235 (303)
T ss_pred             CccccCcccchhh--hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHH---H-----HH
Confidence            9999986432111  1111224567999999988889999999999999999998 9999864322110   0     00


Q ss_pred             hcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          723 YQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       723 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                               +........+...+..+.+++.+||+.+|++||++++++++|+.+.
T Consensus       236 ---------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~  281 (303)
T cd05088         236 ---------LPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  281 (303)
T ss_pred             ---------HhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence                     0011111112223457889999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=1.2e-35  Score=310.71  Aligned_cols=250  Identities=28%  Similarity=0.425  Sum_probs=199.8

Q ss_pred             HhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .+.+.++||+|+||.||++...  .+..+|+|++..... ..+.+.+|+.++++++|+|++++++++.+ ...+++|||+
T Consensus         7 ~~~~~~~ig~g~~~~v~~~~~~--~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~   82 (260)
T cd05070           7 SLQLIKKLGNGQFGEVWMGTWN--GNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVTEYM   82 (260)
T ss_pred             HhhhhheeccccCceEEEEEec--CCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEEEec
Confidence            3556788999999999999754  345699999876433 35679999999999999999999998854 5688999999


Q ss_pred             cCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          582 SNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       582 ~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      ++++|.+++...  ..+++..+.+++.|++.||+|||+.   +|+|+||||+||++++++.+||+|||++..........
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~  159 (260)
T cd05070          83 SKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTA  159 (260)
T ss_pred             CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCccccc
Confidence            999999998753  4578999999999999999999998   99999999999999999999999999998764433222


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      .....++..|+|||.+.+..++.++||||||+++|||++ |..||.......   .. .             .+......
T Consensus       160 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~---~~-~-------------~~~~~~~~  222 (260)
T cd05070         160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE---VL-E-------------QVERGYRM  222 (260)
T ss_pred             ccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHH---HH-H-------------HHHcCCCC
Confidence            222335678999999988899999999999999999999 888886432110   00 0             01111111


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhcc
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEG  775 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~  775 (792)
                      ..+...+..+.+++.+|++.+|++|||++++.+.|+.
T Consensus       223 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         223 PCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            2233445678999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=7.7e-36  Score=321.27  Aligned_cols=242  Identities=24%  Similarity=0.343  Sum_probs=194.0

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcc-cCCCCcccccceeccCCceEEEEEecc
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQ-THHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~-l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.||+|+||.||+|... .+++.||+|+++...   ......+..|..++.. ++||||+++++++.+.+..++||||++
T Consensus         1 ~~lG~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~   79 (316)
T cd05619           1 KMLGKGSFGKVFLAELK-GTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLN   79 (316)
T ss_pred             CeeeeCCCEEEEEEEEC-CCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCC
Confidence            36999999999999754 456789999987532   2334556778888876 489999999999999999999999999


Q ss_pred             CCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          583 NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       583 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      +|+|.+++.....+++.....++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++...... .....
T Consensus        80 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~  155 (316)
T cd05619          80 GGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD-AKTCT  155 (316)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC-Cceee
Confidence            999999998777889999999999999999999998   99999999999999999999999999987532221 12234


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCH
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV  742 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  742 (792)
                      ..||+.|+|||.+.+..++.++|||||||++|||++|+.||.......   ....             +...  ....+.
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~---~~~~-------------i~~~--~~~~~~  217 (316)
T cd05619         156 FCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE---LFQS-------------IRMD--NPCYPR  217 (316)
T ss_pred             ecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHH---HHHH-------------HHhC--CCCCCc
Confidence            568999999999999899999999999999999999999996542210   0000             0000  011122


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHH-hHHH
Q 003836          743 TMLHRFVMVAFWCIQEDPSHRPTMR-KVTQ  771 (792)
Q Consensus       743 ~~~~~l~~l~~~Cl~~~p~~RPs~~-evl~  771 (792)
                      ....++.+++.+||+.+|++||++. ++.+
T Consensus       218 ~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05619         218 WLTREAKDILVKLFVREPERRLGVKGDIRQ  247 (316)
T ss_pred             cCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence            3445678999999999999999997 6654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-35  Score=314.63  Aligned_cols=249  Identities=27%  Similarity=0.301  Sum_probs=198.9

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      ...+.||+|+||+||++... .+++.||+|++....   ......+.+|+.++++++|+||+++++.+..++..++||||
T Consensus         3 ~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05605           3 RHYRVLGKGGFGEVCACQVR-ATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             eEEEEEecCCCeEEEEEEEc-CCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence            34578999999999999753 456799999986532   22235678899999999999999999999999999999999


Q ss_pred             ccCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          581 MSNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       581 ~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      +++|+|.+++...  ..+++..+..++.|++.||.|||+.   +|+|+||||+||++++++.++|+|||+++......  
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~--  156 (285)
T cd05605          82 MNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE--  156 (285)
T ss_pred             cCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC--
Confidence            9999999888643  4688999999999999999999998   99999999999999999999999999998654222  


Q ss_pred             ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          659 TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      ......|++.|+|||.+.+..++.++|||||||++|||++|+.||...........             +...+.. ...
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~-------------~~~~~~~-~~~  222 (285)
T cd05605         157 TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREE-------------VERRVKE-DQE  222 (285)
T ss_pred             ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHH-------------HHHHhhh-ccc
Confidence            12234689999999999988999999999999999999999999975432111000             0000110 111


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCC-----CHHhHHHH
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRP-----TMRKVTQM  772 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RP-----s~~evl~~  772 (792)
                      ..+...+..+.+++..||+.||++||     +++++++.
T Consensus       223 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05605         223 EYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH  261 (285)
T ss_pred             ccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence            22334567788999999999999999     88888654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=9.6e-36  Score=317.67  Aligned_cols=261  Identities=23%  Similarity=0.335  Sum_probs=198.3

Q ss_pred             HHhhhhhhcCccccceEEEeeecC-------------CCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccc
Q 003836          501 VTRGFKEELGRGAFGTVYKGFVNM-------------GSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLG  566 (792)
Q Consensus       501 ~~~~~~~~lG~G~~g~Vy~g~~~~-------------~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g  566 (792)
                      ..+.+.++||+|+||.||++....             +....||+|+++... ......+.+|++++++++|+||+++++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~   84 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG   84 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence            345567889999999999986532             122458999987542 334567999999999999999999999


Q ss_pred             eeccCCceEEEEEeccCCCccccccCC------------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEE
Q 003836          567 YCDEGQNRLLVYEFMSNGTVASFLFGD------------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNIL  634 (792)
Q Consensus       567 ~~~~~~~~~lV~E~~~~gsL~~~l~~~------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NIL  634 (792)
                      ++...+..++||||+++++|.+++...            ..+++..+++++.|++.||+|||+.   +++|+||||+||+
T Consensus        85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil  161 (295)
T cd05097          85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNCL  161 (295)
T ss_pred             EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhEE
Confidence            999999999999999999999988543            1357888999999999999999998   9999999999999


Q ss_pred             EcCCCCeEEeecCCCccccCCCCCc-cccccccCCcccccccccCCCCcccceehHHHHHHHHHh--cCcCCCcchhhhh
Q 003836          635 LDDHYNARISDFGLAKLLTLDQSHT-NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC--LRRNIDNEISKVD  711 (792)
Q Consensus       635 l~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t--g~~p~~~~~~~~~  711 (792)
                      +++++.+||+|||+++......... .....++..|+|||.+.+..++.++||||||++++||++  +..||........
T Consensus       162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~  241 (295)
T cd05097         162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQV  241 (295)
T ss_pred             EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHH
Confidence            9999999999999998654322111 122335678999999998899999999999999999998  5566654322111


Q ss_pred             hhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhc
Q 003836          712 KAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE  774 (792)
Q Consensus       712 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~  774 (792)
                      ......    ......      .......+...+..+.+++.+||+.+|++||++++|++.|+
T Consensus       242 ~~~~~~----~~~~~~------~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         242 IENTGE----FFRNQG------RQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             HHHHHH----hhhhcc------ccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence            000000    000000      00000111223467899999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=8.4e-36  Score=317.74  Aligned_cols=255  Identities=26%  Similarity=0.357  Sum_probs=202.4

Q ss_pred             hhhhhhcCccccceEEEeeecC----CCceEEEEEEccccc-ccchHHHHHHHHHhccc-CCCCcccccceeccCCceEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNM----GSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLL  576 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~----~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~l  576 (792)
                      +.+.+.||+|+||.||++....    .....+|+|++.... .....++.+|+.++.++ +|+||+++++++..++..++
T Consensus        14 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l   93 (293)
T cd05053          14 LTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYV   93 (293)
T ss_pred             eEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEE
Confidence            3445789999999999997642    234689999987532 23345688999999999 89999999999999999999


Q ss_pred             EEEeccCCCccccccC----------------CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCC
Q 003836          577 VYEFMSNGTVASFLFG----------------DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYN  640 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~----------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~  640 (792)
                      ||||+++|+|.+++..                ...+++..+++++.|++.||+|||+.   +|+|+||||+|||+++++.
T Consensus        94 i~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~~~~~~  170 (293)
T cd05053          94 VVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLVTEDHV  170 (293)
T ss_pred             EEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEEcCCCe
Confidence            9999999999999853                24578899999999999999999998   9999999999999999999


Q ss_pred             eEEeecCCCccccCCCCCc-cccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHH
Q 003836          641 ARISDFGLAKLLTLDQSHT-NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDW  718 (792)
Q Consensus       641 ~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~  718 (792)
                      +||+|||+++......... .....++..|+|||.+.+..++.++|||||||++|||++ |..||........       
T Consensus       171 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~-------  243 (293)
T cd05053         171 MKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEEL-------  243 (293)
T ss_pred             EEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHH-------
Confidence            9999999998764332211 122335678999999988899999999999999999998 8888754321110       


Q ss_pred             HHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          719 AYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                                ...+........+......+.+++.+||+.+|.+|||+.|+++.|++++
T Consensus       244 ----------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         244 ----------FKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             ----------HHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence                      0011111111223344567889999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=9e-36  Score=314.24  Aligned_cols=240  Identities=22%  Similarity=0.349  Sum_probs=189.7

Q ss_pred             hcCccccceEEEeeecC-----------------------CCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccc
Q 003836          508 ELGRGAFGTVYKGFVNM-----------------------GSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL  564 (792)
Q Consensus       508 ~lG~G~~g~Vy~g~~~~-----------------------~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l  564 (792)
                      .||+|+||.||+|.+..                       +....|++|++..........+.+|+.++++++|+||+++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            59999999999997531                       1224689999876545555678899999999999999999


Q ss_pred             cceeccCCceEEEEEeccCCCccccccC-CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCC----
Q 003836          565 LGYCDEGQNRLLVYEFMSNGTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY----  639 (792)
Q Consensus       565 ~g~~~~~~~~~lV~E~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~----  639 (792)
                      +++|.+....++||||+++|+|..++.. ...+++..+.+++.||++||+|||++   +|+||||||+|||++..+    
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~~~~~  158 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARLGLAEG  158 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEeccCcccC
Confidence            9999999999999999999999999865 45688999999999999999999998   999999999999998644    


Q ss_pred             ---CeEEeecCCCccccCCCCCccccccccCCccccccccc-CCCCcccceehHHHHHHHHH-hcCcCCCcchhhhhhhh
Q 003836          640 ---NARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEII-CLRRNIDNEISKVDKAI  714 (792)
Q Consensus       640 ---~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~-tg~~p~~~~~~~~~~~~  714 (792)
                         .+|++|||++......     ....++..|+|||.+.+ ..++.++||||||+++|||+ +|+.||.......... 
T Consensus       159 ~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~-  232 (274)
T cd05076         159 TSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKER-  232 (274)
T ss_pred             ccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHH-
Confidence               3799999998654322     12246788999998865 56899999999999999995 6888886542211100 


Q ss_pred             HHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhc
Q 003836          715 LTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE  774 (792)
Q Consensus       715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~  774 (792)
                         .             .....  ..+.....++.+++.+||+.+|++||++.+|++.|+
T Consensus       233 ---~-------------~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~  274 (274)
T cd05076         233 ---F-------------YEKKH--RLPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT  274 (274)
T ss_pred             ---H-------------HHhcc--CCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence               0             00000  011112346889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=1.4e-35  Score=308.28  Aligned_cols=246  Identities=26%  Similarity=0.386  Sum_probs=198.1

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccc-cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCCC
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGT  585 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~gs  585 (792)
                      +.||+|+||.||+|...  ++..+|+|++..... .....+.+|++++++++|+||+++++++......++||||+++++
T Consensus         1 ~~ig~g~~g~vy~~~~~--~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   78 (250)
T cd05085           1 ELLGKGNFGEVFKGTLK--DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGD   78 (250)
T ss_pred             CccCCCCCceEEEEEec--CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCc
Confidence            36899999999999754  356899999876433 334578999999999999999999999999999999999999999


Q ss_pred             ccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccccc
Q 003836          586 VASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR  664 (792)
Q Consensus       586 L~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  664 (792)
                      |.+++... ..+++..+..++.|++.||.|||+.   +++|+||||+||++++++.+||+|||++...............
T Consensus        79 L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~  155 (250)
T cd05085          79 FLSFLRKKKDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQ  155 (250)
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCC
Confidence            99998654 4578999999999999999999998   9999999999999999999999999999764432222222233


Q ss_pred             ccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHH
Q 003836          665 GTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVT  743 (792)
Q Consensus       665 gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  743 (792)
                      ++..|+|||.+....++.++||||||+++||+++ |..||.........        ...         ........+..
T Consensus       156 ~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~--------~~~---------~~~~~~~~~~~  218 (250)
T cd05085         156 IPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAR--------EQV---------EKGYRMSCPQK  218 (250)
T ss_pred             CcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHH--------HHH---------HcCCCCCCCCC
Confidence            4678999999998899999999999999999998 88898654221100        000         00111112223


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHhHHHHhc
Q 003836          744 MLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE  774 (792)
Q Consensus       744 ~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~  774 (792)
                      .+..+.+++.+|++.+|++||++.|+++.|.
T Consensus       219 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         219 CPDDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             CCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence            4568899999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=8.8e-36  Score=322.12  Aligned_cols=238  Identities=26%  Similarity=0.301  Sum_probs=190.7

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHH-HhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVN-GIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~-~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.||+|+||+||++... .+++.||+|++....   ....+++.+|.. +++.++||||+++++.+.+.+..++||||++
T Consensus         1 ~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~   79 (323)
T cd05575           1 KVIGKGSFGKVLLAKHK-ADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVN   79 (323)
T ss_pred             CeeeeCCCeEEEEEEEC-CCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCC
Confidence            36999999999999754 456799999986532   122344555554 5678999999999999999999999999999


Q ss_pred             CCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          583 NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       583 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      +|+|.+++.....+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++..... ......
T Consensus        80 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~-~~~~~~  155 (323)
T cd05575          80 GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH-SKTTST  155 (323)
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccC-CCcccc
Confidence            999999998878889999999999999999999998   9999999999999999999999999998754322 222334


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCH
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV  742 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  742 (792)
                      ..||+.|+|||.+.+..++.++|||||||++|||++|+.||........                ...+.....  ....
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~----------------~~~i~~~~~--~~~~  217 (323)
T cd05575         156 FCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEM----------------YDNILNKPL--RLKP  217 (323)
T ss_pred             ccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHH----------------HHHHHcCCC--CCCC
Confidence            5689999999999999999999999999999999999999965422100                001111111  1112


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHH
Q 003836          743 TMLHRFVMVAFWCIQEDPSHRPTMR  767 (792)
Q Consensus       743 ~~~~~l~~l~~~Cl~~~p~~RPs~~  767 (792)
                      ..+..+.+++.+||+.+|.+||++.
T Consensus       218 ~~~~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         218 NISVSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             CCCHHHHHHHHHHhhcCHHhCCCCC
Confidence            2356788999999999999999985

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=1e-35  Score=312.89  Aligned_cols=254  Identities=27%  Similarity=0.443  Sum_probs=201.9

Q ss_pred             hhhhhhcCccccceEEEeeecCCC--ceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGS--SNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~--~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      ..+.+.||+|+||.||+|......  ...||+|.+.... ....++|.+|+.++++++||||+++++++.++...++|||
T Consensus         6 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e   85 (269)
T cd05065           6 VKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITE   85 (269)
T ss_pred             eEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEe
Confidence            456678999999999999875432  2479999987542 3345689999999999999999999999999999999999


Q ss_pred             eccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          580 FMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       580 ~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      |+++++|.+++... ..+++..+..++.|++.||+|||+.   +++|+||||+||+++.++.+||+|||+++........
T Consensus        86 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~  162 (269)
T cd05065          86 FMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD  162 (269)
T ss_pred             cCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCccccccccCccc
Confidence            99999999999754 5678999999999999999999998   9999999999999999999999999998865433221


Q ss_pred             cc-c-ccc--ccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhh
Q 003836          659 TN-T-AIR--GTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVE  733 (792)
Q Consensus       659 ~~-~-~~~--gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  733 (792)
                      .. . ...  .+..|+|||.+....++.++||||||+++||+++ |..||.......    .....             .
T Consensus       163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~----~~~~i-------------~  225 (269)
T cd05065         163 PTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD----VINAI-------------E  225 (269)
T ss_pred             cccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH----HHHHH-------------H
Confidence            11 1 111  2457999999999999999999999999999886 999986532210    00000             0


Q ss_pred             chhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          734 NDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       734 ~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                      .......+.+.+..+.+++.+||+.+|++||++++|+++|+++
T Consensus       226 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         226 QDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             cCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            1111111223456678999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=1.4e-35  Score=312.32  Aligned_cols=252  Identities=25%  Similarity=0.401  Sum_probs=195.8

Q ss_pred             hhhhcCccccceEEEeeecCCCc-eEEEEEEcccc--cccchHHHHHHHHHhcccCCCCcccccceeccC------CceE
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSS-NHVAVKKLNSV--FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEG------QNRL  575 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~-~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~------~~~~  575 (792)
                      +.++||+|+||.||+|....... ..+|+|.++..  .....+.+.+|++++++++|+||+++++++...      ...+
T Consensus         3 i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   82 (272)
T cd05075           3 LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPV   82 (272)
T ss_pred             cccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcE
Confidence            45789999999999998754332 36899988653  233456789999999999999999999987432      2468


Q ss_pred             EEEEeccCCCccccccC------CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCC
Q 003836          576 LVYEFMSNGTVASFLFG------DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLA  649 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a  649 (792)
                      +||||+++|+|.+++..      ...+++.....++.||+.||+|||+.   +|+||||||+|||+++++.+||+|||++
T Consensus        83 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~  159 (272)
T cd05075          83 VILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFGLS  159 (272)
T ss_pred             EEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCCcc
Confidence            99999999999988732      23478999999999999999999998   9999999999999999999999999999


Q ss_pred             ccccCCCCC-ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccc
Q 003836          650 KLLTLDQSH-TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERT  727 (792)
Q Consensus       650 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  727 (792)
                      +........ ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||.......   .     ........
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~-----~~~~~~~~  231 (272)
T cd05075         160 KKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSE---I-----YDYLRQGN  231 (272)
T ss_pred             cccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHH---H-----HHHHHcCC
Confidence            876433221 1122345678999999999999999999999999999999 788885432210   0     00011110


Q ss_pred             hhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          728 LEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       728 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                               ....+...+..+.+++.+||+.+|++|||+++|++.|+.+
T Consensus       232 ---------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         232 ---------RLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             ---------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence                     0111223456688999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=8.3e-36  Score=319.42  Aligned_cols=263  Identities=21%  Similarity=0.263  Sum_probs=194.1

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccc-cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +.+.+.||+|+||.||+|... .+++.+|+|++..... .....+.+|+.++++++||||+++++++.+....++||||+
T Consensus         7 y~~~~~lg~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   85 (303)
T cd07869           7 YEKLEKLGEGSYATVYKGKSK-VNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYV   85 (303)
T ss_pred             ceEeeeEEecCCEEEEEEEEC-CCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECC
Confidence            345678999999999999754 4567899999875432 23456789999999999999999999999999999999999


Q ss_pred             cCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          582 SNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       582 ~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      + ++|.+++... ..+++..+..++.||+.||+|||+.   +|+||||||+|||+++++.+||+|||+++...... ...
T Consensus        86 ~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~  160 (303)
T cd07869          86 H-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSVPS-HTY  160 (303)
T ss_pred             C-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccCCC-ccC
Confidence            6 5777777554 5678899999999999999999998   99999999999999999999999999997543222 222


Q ss_pred             ccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHH-----Hhhccc-chhHhhh
Q 003836          661 TAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAY-----DRYQER-TLEALVE  733 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~  733 (792)
                      ....+++.|+|||.+.+ ..++.++|||||||++|||++|+.||.................     ..+... ....+..
T Consensus       161 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (303)
T cd07869         161 SNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKP  240 (303)
T ss_pred             CCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcccccc
Confidence            33457899999998865 4588999999999999999999999975432111100000000     000000 0000000


Q ss_pred             chhcccC---------CHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          734 NDLEAMN---------NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       734 ~~~~~~~---------~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .......         ....+..+.+++.+||+.||++|||++|+++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~  287 (303)
T cd07869         241 ERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS  287 (303)
T ss_pred             ccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence            0000000         0012356789999999999999999999987

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=1.8e-35  Score=308.78  Aligned_cols=248  Identities=26%  Similarity=0.365  Sum_probs=200.7

Q ss_pred             hhcCccccceEEEeeecCCCc--eEEEEEEcccccc-cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          507 EELGRGAFGTVYKGFVNMGSS--NHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~--~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      +.||+|++|.||+|.+....+  ..+|+|.+..... ...+.+.+|+.++++++|+||+++++.+.+ ...++|+||+++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence            468999999999998754233  3699999987655 566789999999999999999999999988 889999999999


Q ss_pred             CCccccccCCC--CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC--c
Q 003836          584 GTVASFLFGDS--KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH--T  659 (792)
Q Consensus       584 gsL~~~l~~~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~--~  659 (792)
                      ++|.+++....  .+++.....++.|++.||+|||+.   +++|+||||+||+++.++.+||+|||+++........  .
T Consensus        80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  156 (257)
T cd05040          80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVM  156 (257)
T ss_pred             CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccccccceec
Confidence            99999997653  689999999999999999999998   9999999999999999999999999999876543221  1


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      .....++..|+|||.+.+..++.++||||||+++|||++ |+.||........   ....             .......
T Consensus       157 ~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~---~~~~-------------~~~~~~~  220 (257)
T cd05040         157 EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQI---LKKI-------------DKEGERL  220 (257)
T ss_pred             ccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHH---HHHH-------------HhcCCcC
Confidence            123456789999999998899999999999999999999 9999864322110   0000             0000011


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhc
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE  774 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~  774 (792)
                      ..+...+..+.+++.+||+.+|++||++.++++.|.
T Consensus       221 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         221 ERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            112234567889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9.1e-36  Score=322.87  Aligned_cols=236  Identities=24%  Similarity=0.318  Sum_probs=200.5

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEEEe
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      |.++||+|.||+|+++.+. ++++.+|||.+++..   .+..+..+.|.+++... +||.|+.|+.+|...+++++||||
T Consensus       372 ~l~vLGkGsFGkV~lae~k-~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey  450 (694)
T KOG0694|consen  372 LLAVLGRGSFGKVLLAELK-GTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEY  450 (694)
T ss_pred             EEEEeccCcCceEEEEEEc-CCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEe
Confidence            4578999999999999875 556799999998753   45567788888888877 599999999999999999999999


Q ss_pred             ccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          581 MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       581 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +.||++..+. ....+++....-++..|+.||.|||++   +||+||||.+|||||.+|.+||+|||+++..... ....
T Consensus       451 ~~Ggdm~~~~-~~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~-g~~T  525 (694)
T KOG0694|consen  451 VAGGDLMHHI-HTDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ-GDRT  525 (694)
T ss_pred             cCCCcEEEEE-ecccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccccCCC-CCcc
Confidence            9999944433 446789999999999999999999999   9999999999999999999999999999975433 3355


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh--cc
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL--EA  738 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  738 (792)
                      .+++|||.|||||++.+..|+.+.|.|||||+||||+.|..||..+.++..                    .+..+  +.
T Consensus       526 sTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~--------------------FdsI~~d~~  585 (694)
T KOG0694|consen  526 STFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEV--------------------FDSIVNDEV  585 (694)
T ss_pred             ccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHH--------------------HHHHhcCCC
Confidence            678999999999999999999999999999999999999999986543311                    12211  22


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCH
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTM  766 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~  766 (792)
                      .++...+.+.+.++.++|..+|++|.-+
T Consensus       586 ~yP~~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  586 RYPRFLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             CCCCcccHHHHHHHHHHhccCcccccCC
Confidence            3566778899999999999999999866

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=7.3e-36  Score=328.00  Aligned_cols=249  Identities=20%  Similarity=0.261  Sum_probs=196.8

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +.+.+.||+|+||.||++... .+++.+|+|++.+..   ....+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus        45 y~~~~~lG~G~fg~Vy~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~E  123 (370)
T cd05621          45 YDVVKVIGRGAFGEVQLVRHK-SSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVME  123 (370)
T ss_pred             CeEEEEEEecCCeEEEEEEEC-CCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEc
Confidence            445578999999999999754 456789999986422   2234568899999999999999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      |+++|+|.+++... .+++..+..++.||+.||+|||+.   +|+||||||+|||+++++.+||+|||+++.........
T Consensus       124 y~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~  199 (370)
T cd05621         124 YMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVR  199 (370)
T ss_pred             CCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccceecccCCcee
Confidence            99999999998654 578889999999999999999998   99999999999999999999999999998764333323


Q ss_pred             cccccccCCcccccccccC----CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          660 NTAIRGTKGYVAPEWFRNM----PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~----~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                      .....||+.|+|||.+...    .++.++|||||||++|||++|+.||........                ...+++..
T Consensus       200 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~----------------~~~i~~~~  263 (370)
T cd05621         200 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGT----------------YSKIMDHK  263 (370)
T ss_pred             cccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHH----------------HHHHHhCC
Confidence            3455799999999998654    378999999999999999999999975432111                11111111


Q ss_pred             --hcccCCHHHHHHHHHHHHHccccCCCC--CCCHHhHHHH
Q 003836          736 --LEAMNNVTMLHRFVMVAFWCIQEDPSH--RPTMRKVTQM  772 (792)
Q Consensus       736 --~~~~~~~~~~~~l~~l~~~Cl~~~p~~--RPs~~evl~~  772 (792)
                        +........+..+.+++..||+.++.+  ||+++|+++.
T Consensus       264 ~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h  304 (370)
T cd05621         264 NSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH  304 (370)
T ss_pred             cccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence              111112234567788889999855543  8899999886

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=1.3e-35  Score=313.96  Aligned_cols=256  Identities=26%  Similarity=0.378  Sum_probs=201.8

Q ss_pred             hhhhhcCccccceEEEeeecCCCc---eEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSS---NHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~---~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      .+.+.||+|+||+||+|.....+.   ..||+|++.... ....+++.+|+.++++++|+||+++++++... ..++++|
T Consensus        10 ~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~l~~~   88 (279)
T cd05109          10 KKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQLVTQ   88 (279)
T ss_pred             eeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcEEEEE
Confidence            345789999999999997543222   258999987533 33456789999999999999999999999754 5779999


Q ss_pred             eccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          580 FMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       580 ~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      |+++|+|.+++... ..+++..+..++.||+.||+|||+.   +|+||||||+|||+++++.+||+|||+++........
T Consensus        89 ~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~  165 (279)
T cd05109          89 LMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE  165 (279)
T ss_pred             cCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceeecccccce
Confidence            99999999999764 5689999999999999999999998   9999999999999999999999999999876543222


Q ss_pred             c-cccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          659 T-NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       659 ~-~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                      . .....+++.|+|||.+.+..++.++||||||+++|||++ |..||.......    +..             .+....
T Consensus       166 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~----~~~-------------~~~~~~  228 (279)
T cd05109         166 YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE----IPD-------------LLEKGE  228 (279)
T ss_pred             eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH----HHH-------------HHHCCC
Confidence            1 112234678999999998899999999999999999998 888886432211    101             111111


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCCC
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP  780 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~~  780 (792)
                      ....+...+..+.+++.+||+.||++||++.++++.|+.+...|
T Consensus       229 ~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~  272 (279)
T cd05109         229 RLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP  272 (279)
T ss_pred             cCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence            11112234567889999999999999999999999998876655

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=7.7e-36  Score=322.71  Aligned_cols=245  Identities=25%  Similarity=0.343  Sum_probs=196.5

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCC-CCcccccceeccCCceEEEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHH-KNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h-~niv~l~g~~~~~~~~~lV~E  579 (792)
                      .+.+.||+|+||.||+|... ++++.||+|++....   ....+.+..|++++..++| ++|+++++++.+.+..++|||
T Consensus         3 ~~~~~lg~G~~g~Vy~~~~~-~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E   81 (324)
T cd05587           3 NFLMVLGKGSFGKVMLAERK-GTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME   81 (324)
T ss_pred             eEEEEEeeccCeEEEEEEEC-CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEc
Confidence            35578999999999999754 456789999987532   2344667889999999865 568889999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      |+++|+|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus        82 ~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~-~~  157 (324)
T cd05587          82 YVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG-KT  157 (324)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC-Cc
Confidence            999999999998878889999999999999999999998   99999999999999999999999999987532211 12


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||........   .             ..+...  ...
T Consensus       158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~---~-------------~~i~~~--~~~  219 (324)
T cd05587         158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL---F-------------QSIMEH--NVS  219 (324)
T ss_pred             eeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH---H-------------HHHHcC--CCC
Confidence            2345689999999999999999999999999999999999999975432110   0             001111  111


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCH-----HhHHH
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTM-----RKVTQ  771 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~-----~evl~  771 (792)
                      .+...+.++.+++.+||+.+|.+||+.     +++++
T Consensus       220 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~  256 (324)
T cd05587         220 YPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIRE  256 (324)
T ss_pred             CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence            222345678899999999999999986     55554

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=9.5e-36  Score=314.67  Aligned_cols=251  Identities=28%  Similarity=0.356  Sum_probs=198.6

Q ss_pred             hhhhhcCccccceEEEeeecCC----CceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMG----SSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~----~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~  578 (792)
                      .+.+.||+|++|.||+|.....    ....|++|.+.... ...+..+.+|+.++++++|+||+++++++.+.+..++||
T Consensus         9 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   88 (277)
T cd05036           9 TLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILL   88 (277)
T ss_pred             EeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEE
Confidence            3457899999999999987531    45689999886443 334567999999999999999999999999999999999


Q ss_pred             EeccCCCccccccCCC-------CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCC---CeEEeecCC
Q 003836          579 EFMSNGTVASFLFGDS-------KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY---NARISDFGL  648 (792)
Q Consensus       579 E~~~~gsL~~~l~~~~-------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~---~~kl~Dfg~  648 (792)
                      ||+++++|.+++....       .+++..+.+++.||+.||+|||+.   +++|+||||+|||++.++   .+||+|||+
T Consensus        89 e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl~dfg~  165 (277)
T cd05036          89 ELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKIADFGM  165 (277)
T ss_pred             ecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEeccCcc
Confidence            9999999999986542       478899999999999999999998   999999999999998764   599999999


Q ss_pred             CccccCCCCCc-cccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhccc
Q 003836          649 AKLLTLDQSHT-NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQER  726 (792)
Q Consensus       649 a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~  726 (792)
                      ++......... ......+..|+|||.+.+..++.++|||||||++|||++ |+.||........               
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~---------------  230 (277)
T cd05036         166 ARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEV---------------  230 (277)
T ss_pred             ccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH---------------
Confidence            98763222111 112223568999999999999999999999999999997 8888865432110               


Q ss_pred             chhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhc
Q 003836          727 TLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE  774 (792)
Q Consensus       727 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~  774 (792)
                        ...+........+...+..+.+++.+||+.+|++||++.+|++.|+
T Consensus       231 --~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         231 --MEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             --HHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence              0011111111223344567889999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=1.1e-35  Score=321.61  Aligned_cols=244  Identities=23%  Similarity=0.294  Sum_probs=193.1

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHh---cccCCCCcccccceeccCCceEEEE
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGI---GQTHHKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l---~~l~h~niv~l~g~~~~~~~~~lV~  578 (792)
                      +.+.||+|+||.||++... .+++.||||+++...   ....+.+.+|++++   ++++||||+++++++.+.+..++||
T Consensus         3 i~~~lg~G~~g~Vy~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~   81 (324)
T cd05589           3 CLAVLGRGHFGKVLLAEYK-KTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVM   81 (324)
T ss_pred             EEEEEeecCCEEEEEEEEC-CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEE
Confidence            4578999999999999754 456789999987532   22334566676554   5678999999999999999999999


Q ss_pred             EeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          579 EFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       579 E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      ||+++++|..++.. ..+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++...... .
T Consensus        82 E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~-~  156 (324)
T cd05589          82 EYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFG-D  156 (324)
T ss_pred             cCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCCCCC-C
Confidence            99999999988854 4689999999999999999999998   99999999999999999999999999987543222 2


Q ss_pred             ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          659 TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      ......|++.|+|||.+.+..++.++|||||||++|||++|+.||........   .             ..+....  .
T Consensus       157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~---~-------------~~i~~~~--~  218 (324)
T cd05589         157 RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEV---F-------------DSIVNDE--V  218 (324)
T ss_pred             cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHH---H-------------HHHHhCC--C
Confidence            22345689999999999999999999999999999999999999965432110   0             0011111  1


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCC-----CHHhHHHH
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRP-----TMRKVTQM  772 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RP-----s~~evl~~  772 (792)
                      ..+...+..+.+++.+||+.||.+||     ++.++++.
T Consensus       219 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~  257 (324)
T cd05589         219 RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ  257 (324)
T ss_pred             CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence            12223456788999999999999999     56666653

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=6.2e-36  Score=331.09  Aligned_cols=249  Identities=21%  Similarity=0.269  Sum_probs=193.4

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +.++||+|+||+||++... .+++.+|+|++.+..   ......+.+|++++++++|+||+++++.+.+++..++||||+
T Consensus         5 ~~~~LG~G~~g~Vy~a~~~-~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~   83 (382)
T cd05625           5 KIKTLGIGAFGEVCLARKV-DTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYI   83 (382)
T ss_pred             EEEEEEeCCCEEEEEEEEC-CCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCC
Confidence            3568999999999999754 456789999987532   233457889999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC-----
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ-----  656 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~-----  656 (792)
                      ++|+|.+++.+...+++.....++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++.+....     
T Consensus        84 ~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~  160 (382)
T cd05625          84 PGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY  160 (382)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCcccccccccccc
Confidence            9999999998777888999999999999999999998   99999999999999999999999999975432100     


Q ss_pred             -----------------------------------------CCccccccccCCcccccccccCCCCcccceehHHHHHHH
Q 003836          657 -----------------------------------------SHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLE  695 (792)
Q Consensus       657 -----------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~e  695 (792)
                                                               ........||+.|+|||++.+..++.++|||||||++||
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~e  240 (382)
T cd05625         161 QSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE  240 (382)
T ss_pred             ccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHH
Confidence                                                     000123468999999999999999999999999999999


Q ss_pred             HHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCC---HHhHHHH
Q 003836          696 IICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPT---MRKVTQM  772 (792)
Q Consensus       696 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs---~~evl~~  772 (792)
                      |++|+.||..............     +         ............+.++.+++.+++ .+|.+|++   ++|+++.
T Consensus       241 lltG~~Pf~~~~~~~~~~~i~~-----~---------~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h  305 (382)
T cd05625         241 MLVGQPPFLAQTPLETQMKVIN-----W---------QTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAH  305 (382)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHc-----c---------CCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcC
Confidence            9999999975432211100000     0         000111111223455666676665 49999997   7777653

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.5e-36  Score=303.61  Aligned_cols=270  Identities=23%  Similarity=0.289  Sum_probs=206.3

Q ss_pred             hhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceecc-----CCceEEEE
Q 003836          506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDE-----GQNRLLVY  578 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~-----~~~~~lV~  578 (792)
                      .+.||+|+||.|.++.. ..+++.||||++....  ....++..+|+++|+.++|+||+.+++.+.-     -+..|+|+
T Consensus        27 ~~~iG~GAyGvVcsA~~-~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~  105 (359)
T KOG0660|consen   27 IEPIGRGAYGVVCSAKD-KRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVF  105 (359)
T ss_pred             cccccCcceeeEEEEEE-cCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEeh
Confidence            35799999999999965 4567899999998543  3456788999999999999999999998854     35689999


Q ss_pred             EeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC-C
Q 003836          579 EFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ-S  657 (792)
Q Consensus       579 E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~-~  657 (792)
                      |+|+ .+|...++..+.++......+..||++||+|+|+.   +|+||||||+|+|++.+..+||+|||+|+...... .
T Consensus       106 elMe-tDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~  181 (359)
T KOG0660|consen  106 ELME-TDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFED  181 (359)
T ss_pred             hHHh-hHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccceeeccccCcc
Confidence            9994 59999998888899999999999999999999999   99999999999999999999999999999875431 2


Q ss_pred             CccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH-------HHHhhcccchh
Q 003836          658 HTNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW-------AYDRYQERTLE  729 (792)
Q Consensus       658 ~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~-------~~~~~~~~~~~  729 (792)
                      ...+..+-|..|+|||++.. ..||.+.||||.|||+.||++|+..|.......+...+...       ...........
T Consensus       182 ~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar  261 (359)
T KOG0660|consen  182 GFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKAR  261 (359)
T ss_pred             cchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHH
Confidence            22355678999999999864 68999999999999999999999988654332221111111       11111111122


Q ss_pred             Hhhhchhc-ccCC-----HHHHHHHHHHHHHccccCCCCCCCHHhHHHH--hccCcCCC
Q 003836          730 ALVENDLE-AMNN-----VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM--LEGVVEVP  780 (792)
Q Consensus       730 ~~~~~~~~-~~~~-----~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~--L~~~~~~~  780 (792)
                      ..+.+... ...+     +......++++.+||..||.+|+|++|.++.  |+..-+..
T Consensus       262 ~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~  320 (359)
T KOG0660|consen  262 PYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPE  320 (359)
T ss_pred             HHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCc
Confidence            22221110 0001     1345678999999999999999999999974  44444433

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.4e-35  Score=309.34  Aligned_cols=246  Identities=28%  Similarity=0.417  Sum_probs=202.2

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      ..+.+.||+|++|.||++...   ++.+|+|.+..... ..+++.+|+.++++++|+||+++++++.+....++||||++
T Consensus         8 ~~~~~~ig~g~~g~v~~~~~~---~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   83 (256)
T cd05039           8 LKLGATIGKGEFGDVMLGDYR---GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA   83 (256)
T ss_pred             ccceeeeecCCCceEEEEEec---CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence            445678999999999999753   56899999976543 56789999999999999999999999999999999999999


Q ss_pred             CCCccccccCCC--CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          583 NGTVASFLFGDS--KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       583 ~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +++|.+++....  .+++..+..++.|++.||.|||+.   +++|+||||+||++++++.+||+|||.++.......   
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~---  157 (256)
T cd05039          84 KGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD---  157 (256)
T ss_pred             CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccccccccc---
Confidence            999999997654  689999999999999999999998   999999999999999999999999999987632211   


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                       ....+..|+|||.+....++.++||||||++++|+++ |+.||.......    +.    ..         +.......
T Consensus       158 -~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~----~~----~~---------~~~~~~~~  219 (256)
T cd05039         158 -SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD----VV----PH---------VEKGYRME  219 (256)
T ss_pred             -cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH----HH----HH---------HhcCCCCC
Confidence             2234568999999988899999999999999999997 888886442211    00    00         00111111


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                      .+...+..+.+++.+||+.+|++||+++|++++|+.+
T Consensus       220 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~  256 (256)
T cd05039         220 APEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI  256 (256)
T ss_pred             CccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence            2223457788999999999999999999999999763

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=1e-35  Score=316.62  Aligned_cols=253  Identities=26%  Similarity=0.384  Sum_probs=200.5

Q ss_pred             hhhhcCccccceEEEeeecC----CCceEEEEEEcccccc-cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          505 FKEELGRGAFGTVYKGFVNM----GSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~----~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +.+.||+|+||.||+|....    .....+++|.+..... ....++.+|+.++++++||||+++++.+...+..++|+|
T Consensus         4 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (290)
T cd05045           4 LGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVE   83 (290)
T ss_pred             ccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEE
Confidence            45789999999999997532    1224688998875432 234678999999999999999999999999999999999


Q ss_pred             eccCCCccccccCC------------------------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEE
Q 003836          580 FMSNGTVASFLFGD------------------------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILL  635 (792)
Q Consensus       580 ~~~~gsL~~~l~~~------------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl  635 (792)
                      |+++++|.+++...                        ..+++..++.++.|++.||+|||+.   +|+||||||+|||+
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~nill  160 (290)
T cd05045          84 YAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAARNVLV  160 (290)
T ss_pred             ecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---CeehhhhhhheEEE
Confidence            99999999987532                        2467888999999999999999998   99999999999999


Q ss_pred             cCCCCeEEeecCCCccccCCCCCc-cccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhh
Q 003836          636 DDHYNARISDFGLAKLLTLDQSHT-NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKA  713 (792)
Q Consensus       636 ~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~  713 (792)
                      ++++.+||+|||+++......... .....++..|+|||.+.+..++.++||||||++++||++ |+.||.......   
T Consensus       161 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---  237 (290)
T cd05045         161 AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPER---  237 (290)
T ss_pred             cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHH---
Confidence            999999999999998654332211 122345678999999988889999999999999999998 888885432110   


Q ss_pred             hHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          714 ILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                                    +...+........+...+.++.+++.+||+.+|++||++.|+++.|++++
T Consensus       238 --------------~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~  287 (290)
T cd05045         238 --------------LFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM  287 (290)
T ss_pred             --------------HHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence                          00111111112222334567889999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=4.2e-37  Score=292.79  Aligned_cols=248  Identities=23%  Similarity=0.330  Sum_probs=201.5

Q ss_pred             HhhhhhhcCccccceEEEeeecCCCceEEEEEEccc--ccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNS--VFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~--~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      .+.+.++||+|.|+.||+. ++..+++.+|+|++..  ......+++.+|+++-+.|+||||++|.....+....+||+|
T Consensus        12 ~y~l~e~igkG~FSvVrRc-~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe   90 (355)
T KOG0033|consen   12 NYDVKEELGKGAFSVVRRC-VHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD   90 (355)
T ss_pred             hhhHHHHHccCchHHHHHH-HhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEe
Confidence            3556789999999999998 4667788888888753  334467889999999999999999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC---CCCeEEeecCCCccccCCC
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD---HYNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~---~~~~kl~Dfg~a~~~~~~~  656 (792)
                      +|.+++|..-+-.+...++...-..++||+.+|.|.|..   +|||||+||.|+||..   .--+||+|||+|..+.  .
T Consensus        91 ~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~--~  165 (355)
T KOG0033|consen   91 LVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN--D  165 (355)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEEeC--C
Confidence            999999977665555567778888999999999999999   9999999999999963   3458999999999876  2


Q ss_pred             CCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          657 SHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       657 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                      ........|||+|||||++...+|+..+|||+-||+||-|+.|..||..+....                ..++++....
T Consensus       166 g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~r----------------lye~I~~g~y  229 (355)
T KOG0033|consen  166 GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR----------------LYEQIKAGAY  229 (355)
T ss_pred             ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHH----------------HHHHHhcccc
Confidence            333345679999999999999999999999999999999999999997643211                1111111111


Q ss_pred             c--ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          737 E--AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       737 ~--~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .  ...=....++..+|+.+||..||.+|.|+.|.++
T Consensus       230 d~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~  266 (355)
T KOG0033|consen  230 DYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK  266 (355)
T ss_pred             CCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence            1  1111234567789999999999999999999886

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=1.1e-35  Score=315.31  Aligned_cols=270  Identities=24%  Similarity=0.358  Sum_probs=203.4

Q ss_pred             HhhhhhhcCccccceEEEeeec---CCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccC--CceE
Q 003836          502 TRGFKEELGRGAFGTVYKGFVN---MGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEG--QNRL  575 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~---~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~--~~~~  575 (792)
                      ++...++||+|+||.||++..+   ..+++.+|+|.++... ......+.+|++++++++|+||+++++++...  ...+
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK   84 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence            3445578999999999998753   3456789999987543 33346799999999999999999999998765  5688


Q ss_pred             EEEEeccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccC
Q 003836          576 LVYEFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL  654 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~  654 (792)
                      +||||+++++|.+++.+. ..+++..+..++.||+.||+|||+.   +++||||||+||+++.++.+||+|||+++....
T Consensus        85 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~  161 (284)
T cd05079          85 LIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIET  161 (284)
T ss_pred             EEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCcccccccc
Confidence            999999999999999654 4689999999999999999999998   999999999999999999999999999987654


Q ss_pred             CCCC--ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhh
Q 003836          655 DQSH--TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALV  732 (792)
Q Consensus       655 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  732 (792)
                      ....  ......++..|+|||.+.+..++.++||||||+++|||++++.|...............  ............+
T Consensus       162 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  239 (284)
T cd05079         162 DKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPT--HGQMTVTRLVRVL  239 (284)
T ss_pred             CccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccc--cccccHHHHHHHH
Confidence            3321  11234467789999999888999999999999999999998776533211100000000  0000000000111


Q ss_pred             hchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          733 ENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       733 ~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                      ........+...+..+.+++.+||+.+|++||+++++++.|+.+
T Consensus       240 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         240 EEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             HcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence            11111112233567899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=9.9e-36  Score=319.02  Aligned_cols=262  Identities=24%  Similarity=0.344  Sum_probs=205.4

Q ss_pred             HHHhhhhhhcCccccceEEEeeec------CCCceEEEEEEccccc-ccchHHHHHHHHHhccc-CCCCcccccceeccC
Q 003836          500 EVTRGFKEELGRGAFGTVYKGFVN------MGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEG  571 (792)
Q Consensus       500 ~~~~~~~~~lG~G~~g~Vy~g~~~------~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~  571 (792)
                      ...+.+.+.||+|+||.||++...      ......+|+|.+.... .....++.+|+.+++++ +|+||+++++++...
T Consensus        14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   93 (304)
T cd05101          14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD   93 (304)
T ss_pred             HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence            344456688999999999999642      1223579999987532 33456789999999999 899999999999999


Q ss_pred             CceEEEEEeccCCCccccccCC----------------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEE
Q 003836          572 QNRLLVYEFMSNGTVASFLFGD----------------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILL  635 (792)
Q Consensus       572 ~~~~lV~E~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl  635 (792)
                      ...++||||+++|+|.+++...                ..+++..+..++.||++||.|||+.   +|+||||||+|||+
T Consensus        94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nili  170 (304)
T cd05101          94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNVLV  170 (304)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceEEE
Confidence            9999999999999999998653                2467788999999999999999998   99999999999999


Q ss_pred             cCCCCeEEeecCCCccccCCCCCc-cccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhh
Q 003836          636 DDHYNARISDFGLAKLLTLDQSHT-NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKA  713 (792)
Q Consensus       636 ~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~  713 (792)
                      ++++.+||+|||+++......... .....+++.|+|||.+.+..++.++||||||+++|||++ |..|+........  
T Consensus       171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--  248 (304)
T cd05101         171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL--  248 (304)
T ss_pred             cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH--
Confidence            999999999999998764332221 222345678999999998889999999999999999998 6777754321100  


Q ss_pred             hHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCCCC
Q 003836          714 ILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPI  781 (792)
Q Consensus       714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~~~  781 (792)
                           . .         .+........+...+..+.+++.+||+.+|++||++.|+++.|++++.+..
T Consensus       249 -----~-~---------~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~~  301 (304)
T cd05101         249 -----F-K---------LLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLTT  301 (304)
T ss_pred             -----H-H---------HHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhhh
Confidence                 0 0         011111111122345678899999999999999999999999998876654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=4.3e-36  Score=318.49  Aligned_cols=248  Identities=22%  Similarity=0.325  Sum_probs=207.6

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccc--cccchHHHHHHHHHhcccCCCCcccccceeccCCc-eEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV--FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQN-RLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~-~~lV~E  579 (792)
                      |...+++|+|+||.++..... .+...+++|++.-.  ........++|+.++++++|||||.+.+.+.+++. .+|||+
T Consensus         6 Ye~~~~iG~GafG~a~lvrhk-~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~   84 (426)
T KOG0589|consen    6 YEVLRQVGRGAFGSALLVRHK-SDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVME   84 (426)
T ss_pred             hhhhhhcCccccchhhhhhhc-cCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEe
Confidence            455688999999999998654 44568999987643  23334578999999999999999999999999988 899999


Q ss_pred             eccCCCccccccCCC--CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC
Q 003836          580 FMSNGTVASFLFGDS--KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      |++||+|.+.+...+  .++++.+.+++.|++.|+.|||++   .|+|||||+.||+++.+..+||.|||+|+.+..+..
T Consensus        85 Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~  161 (426)
T KOG0589|consen   85 YCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDS  161 (426)
T ss_pred             ecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCCchh
Confidence            999999999997653  578999999999999999999988   999999999999999999999999999999875542


Q ss_pred             CccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhc
Q 003836          658 HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLE  737 (792)
Q Consensus       658 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  737 (792)
                       ....+.||+.||.||.+.+.+|..|+|||||||++|||++-+.+|.......-                +..+. +...
T Consensus       162 -~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~L----------------i~ki~-~~~~  223 (426)
T KOG0589|consen  162 -LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSEL----------------ILKIN-RGLY  223 (426)
T ss_pred             -hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHH----------------HHHHh-hccC
Confidence             34457799999999999999999999999999999999999999975432210                00111 1112


Q ss_pred             ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          738 AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       738 ~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ...+...+.++..++..|++.+|..||++.+++.+
T Consensus       224 ~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  224 SPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             CCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence            33455678889999999999999999999999875

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.2e-36  Score=329.92  Aligned_cols=249  Identities=22%  Similarity=0.271  Sum_probs=195.3

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +.+.||+|+||+||++... .+++.||||++.+..   ....+.+.+|++++++++||||+++++++.+....++||||+
T Consensus         5 ~~~~lG~G~~g~Vy~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~   83 (377)
T cd05629           5 TVKVIGKGAFGEVRLVQKK-DTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFL   83 (377)
T ss_pred             EeEEEeecCCEEEEEEEEC-CCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCC
Confidence            4578999999999999654 456789999986532   233467889999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC---
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH---  658 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~---  658 (792)
                      ++|+|.+++.....+++.....++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.+......   
T Consensus        84 ~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  160 (377)
T cd05629          84 PGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYY  160 (377)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence            9999999998878889999999999999999999998   9999999999999999999999999999643211000   


Q ss_pred             -------------------------------------------ccccccccCCcccccccccCCCCcccceehHHHHHHH
Q 003836          659 -------------------------------------------TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLE  695 (792)
Q Consensus       659 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~e  695 (792)
                                                                 ......||+.|+|||.+.+..++.++|||||||++||
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e  240 (377)
T cd05629         161 QKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFE  240 (377)
T ss_pred             cccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhh
Confidence                                                       0012458999999999999999999999999999999


Q ss_pred             HHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCC---CCHHhHHHH
Q 003836          696 IICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHR---PTMRKVTQM  772 (792)
Q Consensus       696 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~R---Ps~~evl~~  772 (792)
                      |++|+.||...........+..+     .         ..+........+.++.+++.+||+ +|.+|   |++.|+++.
T Consensus       241 lltG~~Pf~~~~~~~~~~~i~~~-----~---------~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h  305 (377)
T cd05629         241 CLIGWPPFCSENSHETYRKIINW-----R---------ETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH  305 (377)
T ss_pred             hhcCCCCCCCCCHHHHHHHHHcc-----C---------CccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence            99999999654321110000000     0         000000111234567889999997 67765   599998875

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=4.5e-36  Score=331.57  Aligned_cols=250  Identities=20%  Similarity=0.259  Sum_probs=195.7

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      .+.+.||+|+||.||++... .+++.+|+|++.+..   ......+.+|++++++++|+||+++++.+.+++..++||||
T Consensus         4 ~~~~~lG~G~~g~V~~a~~~-~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~   82 (376)
T cd05598           4 VKIKTIGIGAFGEVCLVRKV-DTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY   82 (376)
T ss_pred             eEEEEEEeCCCeEEEEEEEC-CCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeC
Confidence            34578999999999999754 457899999986532   22346688999999999999999999999999999999999


Q ss_pred             ccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC----
Q 003836          581 MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ----  656 (792)
Q Consensus       581 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~----  656 (792)
                      +++|+|.+++.....+++.....++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||++..+....    
T Consensus        83 ~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~  159 (376)
T cd05598          83 IPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY  159 (376)
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccc
Confidence            99999999998878888999999999999999999998   99999999999999999999999999985331100    


Q ss_pred             --------------------------------------CCccccccccCCcccccccccCCCCcccceehHHHHHHHHHh
Q 003836          657 --------------------------------------SHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC  698 (792)
Q Consensus       657 --------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t  698 (792)
                                                            ........||+.|+|||++.+..++.++|||||||++|||++
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~  239 (376)
T cd05598         160 YQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLV  239 (376)
T ss_pred             cccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhh
Confidence                                                  000123469999999999999999999999999999999999


Q ss_pred             cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCC---CHHhHHHH
Q 003836          699 LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRP---TMRKVTQM  772 (792)
Q Consensus       699 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RP---s~~evl~~  772 (792)
                      |+.||...........+..     +.         ...........+..+.+++.+|+ .+|.+|+   ++.|+++.
T Consensus       240 G~~Pf~~~~~~~~~~~i~~-----~~---------~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h  301 (376)
T cd05598         240 GQPPFLADTPAETQLKVIN-----WE---------TTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH  301 (376)
T ss_pred             CCCCCCCCCHHHHHHHHhc-----cC---------ccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence            9999975432211110000     00         00001111123455667777766 4999999   88988865

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=1.5e-35  Score=311.35  Aligned_cols=254  Identities=24%  Similarity=0.410  Sum_probs=202.2

Q ss_pred             hhhhhhcCccccceEEEeeecCC--CceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMG--SSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~--~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +.+.+.||+|+||.||+|.....  ....+|+|.++... ....+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus         6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (267)
T cd05066           6 IKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTE   85 (267)
T ss_pred             eEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEE
Confidence            34567899999999999976432  23479999987533 2345688999999999999999999999999999999999


Q ss_pred             eccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          580 FMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       580 ~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      |+++++|.+++... ..+++.++..++.|++.||+|||+.   +++|+||||+|||++.++.+||+|||+++........
T Consensus        86 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~  162 (267)
T cd05066          86 YMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA  162 (267)
T ss_pred             cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCcccccccccce
Confidence            99999999999765 4678999999999999999999998   9999999999999999999999999999876543322


Q ss_pred             ccc--cccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          659 TNT--AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       659 ~~~--~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                      ...  ...++..|+|||.+.+..++.++||||||+++||+++ |+.||........   .     ....         ..
T Consensus       163 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~---~-----~~~~---------~~  225 (267)
T cd05066         163 AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDV---I-----KAIE---------EG  225 (267)
T ss_pred             eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHH---H-----HHHh---------CC
Confidence            211  1223568999999998899999999999999999886 9999865322110   0     0000         00


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                      .....+...+..+.+++.+|++.+|.+||+|.++++.|+++
T Consensus       226 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         226 YRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             CcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence            11111223456788999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=2.4e-35  Score=308.53  Aligned_cols=249  Identities=28%  Similarity=0.417  Sum_probs=198.7

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.+.||+|++|.||++....  ...+|+|++.... ...+.+.+|++++++++|+|++++++++.. +..++||||++
T Consensus         8 ~~~~~~ig~g~~~~v~~~~~~~--~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~   83 (260)
T cd05069           8 LRLDVKLGQGCFGEVWMGTWNG--TTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVTEFMG   83 (260)
T ss_pred             eeeeeeecCcCCCeEEEEEEcC--CceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEEEEcCC
Confidence            4556789999999999997643  2469999886532 345678999999999999999999998854 56789999999


Q ss_pred             CCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          583 NGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       583 ~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +++|.+++...  ..+++..+..++.|++.||+|||+.   +++|+||||+||++++++.+||+|||+++..........
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~  160 (260)
T cd05069          84 KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTAR  160 (260)
T ss_pred             CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCccccc
Confidence            99999999754  3478999999999999999999998   999999999999999999999999999987643332222


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      ....++..|+|||.+.+..++.++||||||+++|||++ |+.||........   . .    .         +.......
T Consensus       161 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~---~-~----~---------~~~~~~~~  223 (260)
T cd05069         161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREV---L-E----Q---------VERGYRMP  223 (260)
T ss_pred             CCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH---H-H----H---------HHcCCCCC
Confidence            23345778999999988899999999999999999999 8888865432110   0 0    0         00011111


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhcc
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEG  775 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~  775 (792)
                      .+...+..+.+++.+||+.+|++||++++|++.|+.
T Consensus       224 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         224 CPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             CCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            223455678899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.1e-35  Score=309.32  Aligned_cols=248  Identities=22%  Similarity=0.284  Sum_probs=200.9

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccccc-----cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ-----DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~-----~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      ..+.||+|++|.||++... .+++.+++|.+.....     ...+.+.+|++++++++||||+++++++.+.+..++|+|
T Consensus         6 ~~~~lg~g~~~~vy~~~~~-~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e   84 (263)
T cd06625           6 RGKLLGQGAFGRVYLCYDV-DTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFME   84 (263)
T ss_pred             ccceecCCCceEEEEEEEc-CCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEE
Confidence            4578999999999999653 4567899998764321     123568899999999999999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      |+++++|.+++.....+++....+++.|++.||.|||+.   +|+|+||+|+||++++++.++|+|||+++.........
T Consensus        85 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~  161 (263)
T cd06625          85 YMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSG  161 (263)
T ss_pred             ECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecccccccc
Confidence            999999999998777889999999999999999999998   99999999999999999999999999998654322221


Q ss_pred             c--ccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhc
Q 003836          660 N--TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLE  737 (792)
Q Consensus       660 ~--~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  737 (792)
                      .  ....++..|+|||.+.+..++.++||||||+++|||++|+.||.........                .........
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~----------------~~~~~~~~~  225 (263)
T cd06625         162 TGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAI----------------FKIATQPTN  225 (263)
T ss_pred             ccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHH----------------HHHhccCCC
Confidence            1  2345788999999999988999999999999999999999998653221100                000111111


Q ss_pred             ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          738 AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       738 ~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ...+......+.+++.+||+.+|.+||++.|+++.
T Consensus       226 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         226 PQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             CCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence            22233455678899999999999999999999873

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=1.6e-35  Score=310.97  Aligned_cols=254  Identities=20%  Similarity=0.354  Sum_probs=202.4

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      .+.++||+|+||.||+|... .+++.+|||++....   ......+.+|++++++++||||+++++++.+.+..++|+||
T Consensus         5 ~i~~~l~~g~~~~v~~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   83 (267)
T cd08228           5 QIEKKIGRGQFSEVYRATCL-LDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLEL   83 (267)
T ss_pred             eeeeeeccCCCeeEEEEEEe-CCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEe
Confidence            35578999999999999754 356789999875422   23345788999999999999999999999999999999999


Q ss_pred             ccCCCccccccC----CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC
Q 003836          581 MSNGTVASFLFG----DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       581 ~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~  656 (792)
                      +++++|.+++..    ...+++..+..++.||++||+|||+.   +++|+||||+||+++.++.++|+|||+++......
T Consensus        84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~  160 (267)
T cd08228          84 ADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT  160 (267)
T ss_pred             cCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccchh
Confidence            999999988753    24578889999999999999999998   99999999999999999999999999998764322


Q ss_pred             CCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          657 SHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       657 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                      . ......+++.|+|||.+.+..++.++||||||+++|||++|+.||.........     +. ..        +.....
T Consensus       161 ~-~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~-----~~-~~--------~~~~~~  225 (267)
T cd08228         161 T-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFS-----LC-QK--------IEQCDY  225 (267)
T ss_pred             H-HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHH-----HH-HH--------HhcCCC
Confidence            1 112345788999999998888999999999999999999999998643221110     00 00        000001


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                      ...........+.+++.+||+.+|++||++.+|++.|+.+
T Consensus       226 ~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~  265 (267)
T cd08228         226 PPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM  265 (267)
T ss_pred             CCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence            1111223456789999999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=1.6e-35  Score=322.78  Aligned_cols=259  Identities=25%  Similarity=0.359  Sum_probs=198.5

Q ss_pred             HHhhhhhhcCccccceEEEeeec----CCCceEEEEEEccccc-ccchHHHHHHHHHhccc-CCCCcccccceeccC-Cc
Q 003836          501 VTRGFKEELGRGAFGTVYKGFVN----MGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEG-QN  573 (792)
Q Consensus       501 ~~~~~~~~lG~G~~g~Vy~g~~~----~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~-~~  573 (792)
                      ..+.+.+.||+|+||.||+|...    ..+++.||||+++... ......+.+|+.++.++ +|+||+++++++... ..
T Consensus         7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~   86 (343)
T cd05103           7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP   86 (343)
T ss_pred             hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence            34567789999999999999642    2345789999997533 23345788999999999 789999999988654 56


Q ss_pred             eEEEEEeccCCCccccccCC------------------------------------------------------------
Q 003836          574 RLLVYEFMSNGTVASFLFGD------------------------------------------------------------  593 (792)
Q Consensus       574 ~~lV~E~~~~gsL~~~l~~~------------------------------------------------------------  593 (792)
                      .++||||+++|+|.+++...                                                            
T Consensus        87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (343)
T cd05103          87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA  166 (343)
T ss_pred             eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence            78999999999999887532                                                            


Q ss_pred             -------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC-ccccccc
Q 003836          594 -------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH-TNTAIRG  665 (792)
Q Consensus       594 -------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~g  665 (792)
                             ..+++..+.+++.||++||+|||+.   +|+||||||+|||+++++.+||+|||+++........ ......+
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~  243 (343)
T cd05103         167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARL  243 (343)
T ss_pred             hhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCC
Confidence                   1256777889999999999999998   9999999999999999999999999999875432221 1122345


Q ss_pred             cCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHH
Q 003836          666 TKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTM  744 (792)
Q Consensus       666 t~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  744 (792)
                      +..|+|||.+.+..++.++||||||+++|||++ |..|+........   .    ..         .+........+...
T Consensus       244 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~---~----~~---------~~~~~~~~~~~~~~  307 (343)
T cd05103         244 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE---F----CR---------RLKEGTRMRAPDYT  307 (343)
T ss_pred             CcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH---H----HH---------HHhccCCCCCCCCC
Confidence            678999999988899999999999999999997 8888754321110   0    00         00011111111123


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          745 LHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       745 ~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                      ..++.+++..||+.+|++||++.||++.|+.+.+
T Consensus       308 ~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~  341 (343)
T cd05103         308 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  341 (343)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            4568899999999999999999999999988654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=1.4e-35  Score=314.20  Aligned_cols=269  Identities=25%  Similarity=0.386  Sum_probs=207.5

Q ss_pred             hhhhhhcCccccceEEEeeec---CCCceEEEEEEccccccc-chHHHHHHHHHhcccCCCCcccccceecc--CCceEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVN---MGSSNHVAVKKLNSVFQD-SEKEFKAEVNGIGQTHHKNLVRLLGYCDE--GQNRLL  576 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~---~~~~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~h~niv~l~g~~~~--~~~~~l  576 (792)
                      ..+.+.||+|+||.||++.+.   .++++.+|||++...... ..+.+.+|++++++++|+||+++++++..  ....++
T Consensus         6 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~l   85 (284)
T cd05038           6 LKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRL   85 (284)
T ss_pred             chhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEE
Confidence            345578999999999999864   234678999999865443 46789999999999999999999999877  567899


Q ss_pred             EEEeccCCCccccccCCC-CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCC
Q 003836          577 VYEFMSNGTVASFLFGDS-KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD  655 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~~-~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~  655 (792)
                      ||||+++++|.+++.... .+++..+..++.|++.||+|||+.   +++|+||||+||+++.++.+||+|||++......
T Consensus        86 v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~  162 (284)
T cd05038          86 IMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAKVLPED  162 (284)
T ss_pred             EEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccccccccccC
Confidence            999999999999997654 689999999999999999999998   9999999999999999999999999999876532


Q ss_pred             CCCc--cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhh
Q 003836          656 QSHT--NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVE  733 (792)
Q Consensus       656 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  733 (792)
                      ....  .....++..|+|||.+.+..++.++||||||++++||++|+.|+.............  .........+...+.
T Consensus       163 ~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  240 (284)
T cd05038         163 KDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGI--AQGQMIVTRLLELLK  240 (284)
T ss_pred             CcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcccccc--ccccccHHHHHHHHH
Confidence            2211  112234567999999988899999999999999999999999886532221100000  000000011112222


Q ss_pred             chhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          734 NDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       734 ~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                      .......+...+.++.+++.+||+.+|++||++.||+++|+++
T Consensus       241 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         241 EGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             cCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            2222222333456789999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=1.1e-35  Score=321.23  Aligned_cols=240  Identities=25%  Similarity=0.337  Sum_probs=194.1

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      .+.+.||+|+||.||++... .+++.+|+|++.+..   ....+.+..|..++..+ +|++|+++++++.+.+..++|||
T Consensus         3 ~~~~~lg~G~~g~Vy~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E   81 (323)
T cd05616           3 NFLMVLGKGSFGKVMLAERK-GTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVME   81 (323)
T ss_pred             eEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEc
Confidence            34578999999999999754 556789999987532   22334567788888777 68999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      |+++|+|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||+++++.+||+|||+++...... ..
T Consensus        82 ~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~-~~  157 (323)
T cd05616          82 YVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG-VT  157 (323)
T ss_pred             CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCCCC-Cc
Confidence            999999999998777899999999999999999999998   99999999999999999999999999997543221 12


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      .....||+.|+|||.+.+..++.++|||||||++|||++|+.||........   .             ..+....  ..
T Consensus       158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~---~-------------~~i~~~~--~~  219 (323)
T cd05616         158 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL---F-------------QSIMEHN--VA  219 (323)
T ss_pred             cccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHH---H-------------HHHHhCC--CC
Confidence            2345689999999999999999999999999999999999999975432111   0             0111111  11


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCH
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTM  766 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~  766 (792)
                      .+...+.++.+++.+||+.+|++|++.
T Consensus       220 ~p~~~s~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05616         220 YPKSMSKEAVAICKGLMTKHPGKRLGC  246 (323)
T ss_pred             CCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence            223455678899999999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=3.7e-35  Score=306.63  Aligned_cols=248  Identities=31%  Similarity=0.449  Sum_probs=204.0

Q ss_pred             hhcCccccceEEEeeecCC--CceEEEEEEcccccccc-hHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          507 EELGRGAFGTVYKGFVNMG--SSNHVAVKKLNSVFQDS-EKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~--~~~~vavK~~~~~~~~~-~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      +.||+|+||.||++.....  .+..+++|.+....... .+.+.+|++.+++++|+||+++++++......++||||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            4699999999999977532  25689999998654433 67899999999999999999999999999999999999999


Q ss_pred             CCccccccCC---------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccC
Q 003836          584 GTVASFLFGD---------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL  654 (792)
Q Consensus       584 gsL~~~l~~~---------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~  654 (792)
                      ++|.+++...         ..+++..+.+++.|+++||+|||+.   +++|+||+|+||++++++.+||+|||.++....
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~  157 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD  157 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccccccccc
Confidence            9999999875         6789999999999999999999998   999999999999999999999999999987654


Q ss_pred             CCC-CccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhh
Q 003836          655 DQS-HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALV  732 (792)
Q Consensus       655 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  732 (792)
                      ... .......++..|+|||.+....++.++||||||++++||++ |..||........        ...         +
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~--------~~~---------~  220 (262)
T cd00192         158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEV--------LEY---------L  220 (262)
T ss_pred             ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHH--------HHH---------H
Confidence            332 22233457889999999988899999999999999999999 5888865421100        000         0


Q ss_pred             hchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhc
Q 003836          733 ENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE  774 (792)
Q Consensus       733 ~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~  774 (792)
                      ........+...+.++.+++.+||+.+|++|||+.|+++.|+
T Consensus       221 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         221 RKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             HcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            011112223344678899999999999999999999999874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.8e-35  Score=312.48  Aligned_cols=254  Identities=26%  Similarity=0.405  Sum_probs=201.5

Q ss_pred             HhhhhhhcCccccceEEEeeecC----CCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEE
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNM----GSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLL  576 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~----~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~l  576 (792)
                      ...+.+.||+|+||.||+|....    .....+|+|.+.... ......+.+|+.++.+++|+||+++++++......++
T Consensus         7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~   86 (277)
T cd05032           7 KITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLV   86 (277)
T ss_pred             HeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEE
Confidence            34456789999999999997642    234689999987543 2334578899999999999999999999999999999


Q ss_pred             EEEeccCCCccccccCC----------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeec
Q 003836          577 VYEFMSNGTVASFLFGD----------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDF  646 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~----------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Df  646 (792)
                      ||||+++|+|.+++...          ..+++..+..++.||+.||.|||+.   +|+|+||||+|||++.++.+||+||
T Consensus        87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl~df  163 (277)
T cd05032          87 VMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKIGDF  163 (277)
T ss_pred             EEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEECCc
Confidence            99999999999998642          2367889999999999999999998   9999999999999999999999999


Q ss_pred             CCCccccCCCCC-ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhc
Q 003836          647 GLAKLLTLDQSH-TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQ  724 (792)
Q Consensus       647 g~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~  724 (792)
                      |+++........ ......++..|+|||.+.+..++.++||||||+++||+++ |+.||........   . ..      
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~---~-~~------  233 (277)
T cd05032         164 GMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEV---L-KF------  233 (277)
T ss_pred             ccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHH---H-HH------
Confidence            999865433221 2223346788999999988889999999999999999998 8888854322110   0 00      


Q ss_pred             ccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhcc
Q 003836          725 ERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEG  775 (792)
Q Consensus       725 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~  775 (792)
                             +........+...+..+.+++.+||+.+|++|||+.++++.|++
T Consensus       234 -------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  277 (277)
T cd05032         234 -------VIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD  277 (277)
T ss_pred             -------HhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence                   00111111122336788899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=1.6e-35  Score=313.38  Aligned_cols=257  Identities=23%  Similarity=0.338  Sum_probs=203.5

Q ss_pred             HHhhhhhhcCccccceEEEeeecC---CCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceecc-CCceE
Q 003836          501 VTRGFKEELGRGAFGTVYKGFVNM---GSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDE-GQNRL  575 (792)
Q Consensus       501 ~~~~~~~~lG~G~~g~Vy~g~~~~---~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~-~~~~~  575 (792)
                      ..+.+.+.||+|+||.||+|....   ..+..|++|++.... ....+.+.+|+.++++++|+||+++++++.+ ....+
T Consensus         6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~   85 (280)
T cd05043           6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPF   85 (280)
T ss_pred             hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCE
Confidence            344556889999999999998764   235789999987543 2335678899999999999999999998766 56789


Q ss_pred             EEEEeccCCCccccccCC--------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecC
Q 003836          576 LVYEFMSNGTVASFLFGD--------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFG  647 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~--------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg  647 (792)
                      +++||+++++|.+++...        ..+++..+..++.||+.||+|||+.   +++|+||||+||++++++.+||+|||
T Consensus        86 ~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d~g  162 (280)
T cd05043          86 VLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITDNA  162 (280)
T ss_pred             EEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECCCC
Confidence            999999999999998643        3578999999999999999999998   99999999999999999999999999


Q ss_pred             CCccccCCCCC-ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcc
Q 003836          648 LAKLLTLDQSH-TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQE  725 (792)
Q Consensus       648 ~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~  725 (792)
                      +++.+...... ......++..|+|||.+.+..++.++||||||+++||+++ |+.||.......    +..+       
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~----~~~~-------  231 (280)
T cd05043         163 LSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE----MAAY-------  231 (280)
T ss_pred             CcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH----HHHH-------
Confidence            99866433322 1222345778999999998889999999999999999999 999986532211    0000       


Q ss_pred             cchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          726 RTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       726 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                            +............+..+.+++.+||+.+|++|||+.++++.|+.+.
T Consensus       232 ------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~  277 (280)
T cd05043         232 ------LKDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFH  277 (280)
T ss_pred             ------HHcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence                  0011111112223567889999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=1.5e-35  Score=326.68  Aligned_cols=263  Identities=24%  Similarity=0.293  Sum_probs=198.8

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCC-----ceEEE
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQ-----NRLLV  577 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~-----~~~lV  577 (792)
                      ..+.||+|+||.||++... .+++.||+|++....  ....+++.+|+++++.++|+||+++++++....     ..++|
T Consensus         4 ~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv   82 (372)
T cd07853           4 PDRPIGYGAFGVVWSVTDP-RDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVV   82 (372)
T ss_pred             ccceeeeCCCEEEEEEEEC-CCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEE
Confidence            3468999999999999753 456789999986532  234467899999999999999999999998776     78999


Q ss_pred             EEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC
Q 003836          578 YEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      +||+. ++|.+++.....+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++.......
T Consensus        83 ~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~  158 (372)
T cd07853          83 TELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDES  158 (372)
T ss_pred             eeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceeecccCcc
Confidence            99997 57888887777899999999999999999999998   999999999999999999999999999987654433


Q ss_pred             CccccccccCCcccccccccC-CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHH----Hhh---cccchh
Q 003836          658 HTNTAIRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAY----DRY---QERTLE  729 (792)
Q Consensus       658 ~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~----~~~---~~~~~~  729 (792)
                      .......+++.|+|||.+.+. .++.++|||||||++|||++|+.||...........+.....    ..+   .+....
T Consensus       159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~  238 (372)
T cd07853         159 KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARA  238 (372)
T ss_pred             ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHH
Confidence            333445678999999998764 579999999999999999999999975432211111100000    000   000000


Q ss_pred             Hhhhchhcc-------cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          730 ALVENDLEA-------MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       730 ~~~~~~~~~-------~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .+.......       .......+++.+++.+||+.||++|||++|+++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  288 (372)
T cd07853         239 HILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH  288 (372)
T ss_pred             HHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence            000000000       0111235678899999999999999999999974

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=1.8e-35  Score=315.69  Aligned_cols=260  Identities=24%  Similarity=0.356  Sum_probs=201.6

Q ss_pred             hhhhhhcCccccceEEEeeecCCC---------------ceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGS---------------SNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLG  566 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~---------------~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g  566 (792)
                      +.+.++||+|+||.||++......               ...||+|++.... ....+.+.+|++++++++|+||+++++
T Consensus         7 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~   86 (296)
T cd05051           7 LNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLG   86 (296)
T ss_pred             CcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence            456688999999999998764322               2468999987543 234568899999999999999999999


Q ss_pred             eeccCCceEEEEEeccCCCccccccCCC-----------CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEE
Q 003836          567 YCDEGQNRLLVYEFMSNGTVASFLFGDS-----------KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILL  635 (792)
Q Consensus       567 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~-----------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl  635 (792)
                      ++..+...++|+||+++++|.+++....           .+++..+..++.|++.||+|||+.   +|+|+||||+||++
T Consensus        87 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~Nili  163 (296)
T cd05051          87 VCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATRNCLV  163 (296)
T ss_pred             EEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchhceee
Confidence            9999999999999999999999987654           688999999999999999999998   99999999999999


Q ss_pred             cCCCCeEEeecCCCccccCCCCC-ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh--cCcCCCcchhhhhh
Q 003836          636 DDHYNARISDFGLAKLLTLDQSH-TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC--LRRNIDNEISKVDK  712 (792)
Q Consensus       636 ~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t--g~~p~~~~~~~~~~  712 (792)
                      ++++.++|+|||+++........ ......+++.|+|||.+....++.++||||||+++|||++  +..|+.......  
T Consensus       164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~--  241 (296)
T cd05051         164 GKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQ--  241 (296)
T ss_pred             cCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHH--
Confidence            99999999999999865432221 1223346778999999988899999999999999999998  566765432111  


Q ss_pred             hhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhcc
Q 003836          713 AILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEG  775 (792)
Q Consensus       713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~  775 (792)
                       .+ ......+....      .......+...+.++.+++.+||+.+|.+|||+.||++.|+.
T Consensus       242 -~~-~~~~~~~~~~~------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~  296 (296)
T cd05051         242 -VI-ENAGHFFRDDG------RQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR  296 (296)
T ss_pred             -HH-HHHHhcccccc------ccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence             01 00000000000      000011122344678999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=3.4e-35  Score=308.56  Aligned_cols=255  Identities=20%  Similarity=0.340  Sum_probs=203.8

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +.+.+.||+|++|.||++... .+++.++||.+....   .....++.+|+.++++++|+||+++++++.+++..+++||
T Consensus         4 y~~~~~ig~g~~g~v~~~~~~-~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   82 (267)
T cd08229           4 FRIEKKIGRGQFSEVYRATCL-LDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE   82 (267)
T ss_pred             hhhhhhhcccCCeEEEEEeec-CCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEE
Confidence            445678999999999999754 346789999876432   2234678899999999999999999999999999999999


Q ss_pred             eccCCCccccccC----CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCC
Q 003836          580 FMSNGTVASFLFG----DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD  655 (792)
Q Consensus       580 ~~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~  655 (792)
                      |+++++|.+++..    ...+++..+..++.||++||.|||+.   +++|+||||+||+++.++.++|+|||++......
T Consensus        83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~  159 (267)
T cd08229          83 LADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK  159 (267)
T ss_pred             ecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhccccC
Confidence            9999999998863    34578999999999999999999998   9999999999999999999999999998866433


Q ss_pred             CCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          656 QSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       656 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                      .. ......++..|+|||.+.+..++.++||||||+++|||++|..||.........  .            ...+....
T Consensus       160 ~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~--~------------~~~~~~~~  224 (267)
T cd08229         160 TT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYS--L------------CKKIEQCD  224 (267)
T ss_pred             Cc-ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHH--H------------hhhhhcCC
Confidence            22 122345888999999999889999999999999999999999998643221000  0            00000111


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                      ............+.+++.+||+.+|.+||||.+|+++++++
T Consensus       225 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~  265 (267)
T cd08229         225 YPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM  265 (267)
T ss_pred             CCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence            11111223566788999999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=3e-35  Score=308.13  Aligned_cols=241  Identities=22%  Similarity=0.364  Sum_probs=191.0

Q ss_pred             hhcCccccceEEEeeecCC-----------CceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceE
Q 003836          507 EELGRGAFGTVYKGFVNMG-----------SSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRL  575 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~-----------~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~  575 (792)
                      +.||+|+||.||+|+....           ....+++|.+..........+.+|+.+++.++||||+++++++......+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            4689999999999986422           12358999887665555668899999999999999999999999999999


Q ss_pred             EEEEeccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCC-------eEEeecC
Q 003836          576 LVYEFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYN-------ARISDFG  647 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~-------~kl~Dfg  647 (792)
                      +||||+++|+|..++... ..+++..+.+++.||++||+|||++   +|+||||||+|||++.++.       +|++|||
T Consensus        81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g  157 (262)
T cd05077          81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKLSDPG  157 (262)
T ss_pred             EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence            999999999999998754 5689999999999999999999998   9999999999999987664       8999999


Q ss_pred             CCccccCCCCCccccccccCCcccccccc-cCCCCcccceehHHHHHHHHH-hcCcCCCcchhhhhhhhHHHHHHHhhcc
Q 003836          648 LAKLLTLDQSHTNTAIRGTKGYVAPEWFR-NMPITVKVDVYSYGVLLLEII-CLRRNIDNEISKVDKAILTDWAYDRYQE  725 (792)
Q Consensus       648 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~k~DV~S~Gv~l~el~-tg~~p~~~~~~~~~~~~~~~~~~~~~~~  725 (792)
                      ++......     ....++..|+|||.+. ...++.++|||||||++|||+ +|+.|+.........             
T Consensus       158 ~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-------------  219 (262)
T cd05077         158 IPITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-------------  219 (262)
T ss_pred             CCccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-------------
Confidence            98755322     1234678899999886 467899999999999999998 577776543211000             


Q ss_pred             cchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhc
Q 003836          726 RTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE  774 (792)
Q Consensus       726 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~  774 (792)
                          .+......  ........+.+++.+||+.||.+||++.+|++.++
T Consensus       220 ----~~~~~~~~--~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~  262 (262)
T cd05077         220 ----RFYEGQCM--LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN  262 (262)
T ss_pred             ----HHHhcCcc--CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence                00000000  01112356789999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=1.8e-35  Score=310.61  Aligned_cols=253  Identities=21%  Similarity=0.288  Sum_probs=201.3

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.+.||+|+||.||+|+.. .+++.+|+|++..........+.+|+.++++++|+||+++++.+...+..++|+||++
T Consensus        11 y~~~~~lg~g~~g~vy~~~~~-~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~   89 (267)
T cd06646          11 YELIQRVGSGTYGDVYKARNL-HTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCG   89 (267)
T ss_pred             cchhheeecCCCeEEEEEEEC-CCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCC
Confidence            455678999999999999753 4567899999876555556678899999999999999999999999999999999999


Q ss_pred             CCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          583 NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       583 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      +++|.+++.....+++..+..++.|++.||.|||+.   +|+|+||+|+||+++.++.+||+|||+++....... ....
T Consensus        90 ~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~-~~~~  165 (267)
T cd06646          90 GGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA-KRKS  165 (267)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeeccccc-ccCc
Confidence            999999998777889999999999999999999998   999999999999999999999999999986642221 1223


Q ss_pred             ccccCCcccccccc---cCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          663 IRGTKGYVAPEWFR---NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       663 ~~gt~~y~aPE~~~---~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      ..+++.|+|||.+.   ...++.++|||||||++|||++|+.|+...........        .....   +..+...  
T Consensus       166 ~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~--------~~~~~---~~~~~~~--  232 (267)
T cd06646         166 FIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFL--------MSKSN---FQPPKLK--  232 (267)
T ss_pred             cccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhee--------eecCC---CCCCCCc--
Confidence            45788999999884   44578899999999999999999999854321110000        00000   0000000  


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHh
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQML  773 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L  773 (792)
                      .....+..+.+++.+||+.+|++||++++|++.|
T Consensus       233 ~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         233 DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence            1122456788999999999999999999998754

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=3.1e-35  Score=306.59  Aligned_cols=246  Identities=23%  Similarity=0.323  Sum_probs=201.6

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccc--cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV--FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.||+|++|.||++... .+++.+++|.+...  .......+.+|++++++++|+||+++++++.+.+..++||||++
T Consensus         4 ~~~~l~~g~~~~v~~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   82 (256)
T cd08529           4 ILNKIGKGSFGVVFKVVRK-ADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAE   82 (256)
T ss_pred             EeEEecCCCCeEEEEEEEc-CCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCC
Confidence            4578999999999999764 45678999987642  33456788999999999999999999999999999999999999


Q ss_pred             CCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          583 NGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       583 ~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +++|.+++...  ..+++..+.+++.|++.||.|||+.   +++|+||||+||++++++.+||+|||+++....... ..
T Consensus        83 ~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~-~~  158 (256)
T cd08529          83 NGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN-FA  158 (256)
T ss_pred             CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCccc-hh
Confidence            99999999764  5678899999999999999999998   999999999999999999999999999987654322 22


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ....+++.|+|||++.+..++.++||||||++++||++|+.||........   .             ..+... .....
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~-------------~~~~~~-~~~~~  221 (256)
T cd08529         159 NTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGAL---I-------------LKIIRG-VFPPV  221 (256)
T ss_pred             hccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH---H-------------HHHHcC-CCCCC
Confidence            334578899999999999999999999999999999999999965432110   0             001111 11112


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      +......+.+++.+||+.+|++||++.++++.
T Consensus       222 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         222 SQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             ccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence            22455678999999999999999999999873

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=1.1e-35  Score=321.57  Aligned_cols=241  Identities=25%  Similarity=0.278  Sum_probs=191.9

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHH-HhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVN-GIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~-~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.||+|+||.||++... .+++.+|+|++....   .....++..|.. +++.++||||+++++.+...+..++||||++
T Consensus         1 ~~lG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~   79 (325)
T cd05604           1 KVIGKGSFGKVLLAKRK-LDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVN   79 (325)
T ss_pred             CceeeCCCeEEEEEEEC-CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCC
Confidence            36999999999999753 456799999986532   223345556655 4677999999999999999999999999999


Q ss_pred             CCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          583 NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       583 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      +|+|..++.....+++..+..++.||+.||+|||+.   +|+||||||+|||+++++.+||+|||+++..... ......
T Consensus        80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~-~~~~~~  155 (325)
T cd05604          80 GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ-SDTTTT  155 (325)
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCC-CCCccc
Confidence            999999998878899999999999999999999998   9999999999999999999999999998754222 122334


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCH
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV  742 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  742 (792)
                      ..||+.|+|||.+.+..++.++|||||||++|||++|+.||........   .             ..+.....  ....
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~---~-------------~~~~~~~~--~~~~  217 (325)
T cd05604         156 FCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEM---Y-------------DNILHKPL--VLRP  217 (325)
T ss_pred             ccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHH---H-------------HHHHcCCc--cCCC
Confidence            5689999999999999999999999999999999999999965422110   0             00111111  0112


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHhHH
Q 003836          743 TMLHRFVMVAFWCIQEDPSHRPTMRKVT  770 (792)
Q Consensus       743 ~~~~~l~~l~~~Cl~~~p~~RPs~~evl  770 (792)
                      ..+..+.+++.+||+.+|.+||++.+.+
T Consensus       218 ~~~~~~~~ll~~ll~~~p~~R~~~~~~~  245 (325)
T cd05604         218 GASLTAWSILEELLEKDRQRRLGAKEDF  245 (325)
T ss_pred             CCCHHHHHHHHHHhccCHHhcCCCCCCH
Confidence            2445678899999999999999886433

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=1.9e-35  Score=319.96  Aligned_cols=249  Identities=22%  Similarity=0.297  Sum_probs=196.3

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEEEecc
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.||+|+||.||++... .+++.+|+|++++..   ....+.+.+|+.++.++ +|+||+++++++.+.+..++||||++
T Consensus         1 ~~lG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   79 (327)
T cd05617           1 RVIGRGSYAKVLLVRLK-KNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVN   79 (327)
T ss_pred             CeeeeCCCeEEEEEEEC-CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCC
Confidence            36999999999999764 456789999997542   22345688999999888 69999999999999999999999999


Q ss_pred             CCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          583 NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       583 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      +|+|..++.....+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++...... .....
T Consensus        80 ~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~  155 (327)
T cd05617          80 GGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG-DTTST  155 (327)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCC-Cceec
Confidence            999999988777899999999999999999999998   99999999999999999999999999987532211 22234


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCH
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV  742 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  742 (792)
                      ..||+.|+|||.+.+..++.++|||||||++|||++|+.||........... ......        .+.....  ..+.
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~-~~~~~~--------~~~~~~~--~~p~  224 (327)
T cd05617         156 FCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNT-EDYLFQ--------VILEKPI--RIPR  224 (327)
T ss_pred             ccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCccccc-HHHHHH--------HHHhCCC--CCCC
Confidence            5689999999999999999999999999999999999999964322111000 000111        1111111  1222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCH------HhHHH
Q 003836          743 TMLHRFVMVAFWCIQEDPSHRPTM------RKVTQ  771 (792)
Q Consensus       743 ~~~~~l~~l~~~Cl~~~p~~RPs~------~evl~  771 (792)
                      ..+..+.+++.+||+.||++||++      +++++
T Consensus       225 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~  259 (327)
T cd05617         225 FLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKS  259 (327)
T ss_pred             CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHc
Confidence            345667899999999999999984      56654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.7e-36  Score=320.98  Aligned_cols=244  Identities=26%  Similarity=0.343  Sum_probs=207.0

Q ss_pred             hcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCCCcc
Q 003836          508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVA  587 (792)
Q Consensus       508 ~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~gsL~  587 (792)
                      +||+|.||+||-|.. ..+...+|||.+........+.+.+||.+.++++|.|||+++|.|.++...-+.||.++||||.
T Consensus       582 VLGKGTYG~VYA~RD-~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS  660 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARD-MDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS  660 (1226)
T ss_pred             EeecCceeEEEeecc-ccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence            599999999999964 4667889999998877777788999999999999999999999999999999999999999999


Q ss_pred             ccccCC-CCC--chhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC-CCCeEEeecCCCccccCCCCCccccc
Q 003836          588 SFLFGD-SKP--NWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD-HYNARISDFGLAKLLTLDQSHTNTAI  663 (792)
Q Consensus       588 ~~l~~~-~~l--~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~  663 (792)
                      ++|+.. +++  ++.++-...+||++||.|||+.   .|||||||-.|+|++. .|.+||+|||-++.+..-. ....++
T Consensus       661 sLLrskWGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgin-P~TETF  736 (1226)
T KOG4279|consen  661 SLLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGIN-PCTETF  736 (1226)
T ss_pred             HHHHhccCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccCC-cccccc
Confidence            999865 566  7888899999999999999999   9999999999999974 6899999999999875322 233446


Q ss_pred             cccCCcccccccccC--CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCC
Q 003836          664 RGTKGYVAPEWFRNM--PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN  741 (792)
Q Consensus       664 ~gt~~y~aPE~~~~~--~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  741 (792)
                      -||..|||||++..+  .|+.++|||||||.+.||.||++||....+...          .     +-.+=.-...+..+
T Consensus       737 TGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA----------A-----MFkVGmyKvHP~iP  801 (1226)
T KOG4279|consen  737 TGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA----------A-----MFKVGMYKVHPPIP  801 (1226)
T ss_pred             ccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH----------h-----hhhhcceecCCCCc
Confidence            699999999999765  488999999999999999999999965433210          0     00111122345677


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          742 VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       742 ~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .+.+.+...++.+|+.++|.+||+++++++
T Consensus       802 eelsaeak~FilrcFepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  802 EELSAEAKNFILRCFEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             HHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence            888999999999999999999999999986

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=1.1e-35  Score=310.85  Aligned_cols=241  Identities=22%  Similarity=0.380  Sum_probs=191.2

Q ss_pred             hhcCccccceEEEeeecCCC------ceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          507 EELGRGAFGTVYKGFVNMGS------SNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~------~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      +.||+|+||.||+|......      ...+++|.+........+.+.+|+.++++++||||+++++++..+...++||||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            46999999999999764321      235888888765555567889999999999999999999999999999999999


Q ss_pred             ccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCC--------eEEeecCCCcc
Q 003836          581 MSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYN--------ARISDFGLAKL  651 (792)
Q Consensus       581 ~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~--------~kl~Dfg~a~~  651 (792)
                      +++|+|.+++... ..+++..++.++.||+.||+|||+.   +|+||||||+|||++.++.        ++++|||++..
T Consensus        81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~  157 (258)
T cd05078          81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT  157 (258)
T ss_pred             CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEecccccccc
Confidence            9999999999765 4579999999999999999999998   9999999999999987765        59999999875


Q ss_pred             ccCCCCCccccccccCCcccccccccC-CCCcccceehHHHHHHHHHhcC-cCCCcchhhhhhhhHHHHHHHhhcccchh
Q 003836          652 LTLDQSHTNTAIRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIICLR-RNIDNEISKVDKAILTDWAYDRYQERTLE  729 (792)
Q Consensus       652 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  729 (792)
                      ....     ....+++.|+|||.+.+. .++.++||||||+++|||++|. .|+.........                 
T Consensus       158 ~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~-----------------  215 (258)
T cd05078         158 VLPK-----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKL-----------------  215 (258)
T ss_pred             cCCc-----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHH-----------------
Confidence            4321     224578899999999874 5799999999999999999995 444322111000                 


Q ss_pred             HhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhc
Q 003836          730 ALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE  774 (792)
Q Consensus       730 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~  774 (792)
                      .+...  ....+.....++.+++.+||+.+|++|||++++++.|+
T Consensus       216 ~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         216 QFYED--RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             HHHHc--cccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            00000  01112223457889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=3.2e-35  Score=312.51  Aligned_cols=256  Identities=25%  Similarity=0.406  Sum_probs=199.2

Q ss_pred             HhhhhhhcCccccceEEEeeecC----CCceEEEEEEcccccc-cchHHHHHHHHHhcccCCCCcccccceeccCCceEE
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNM----GSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLL  576 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~----~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~l  576 (792)
                      .+.+.+.||+|+||.||+|....    ..+..||+|.+..... .....+.+|+.++++++|+||+++++++.+....++
T Consensus         7 ~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l   86 (288)
T cd05061           7 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLV   86 (288)
T ss_pred             HceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEE
Confidence            34556889999999999986532    2345799998865432 234568899999999999999999999999999999


Q ss_pred             EEEeccCCCccccccCC----------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeec
Q 003836          577 VYEFMSNGTVASFLFGD----------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDF  646 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~----------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Df  646 (792)
                      ||||+++|+|.+++...          ....+..+.+++.|++.||.|||+.   +|+||||||+|||+++++.+||+||
T Consensus        87 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~L~Df  163 (288)
T cd05061          87 VMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDF  163 (288)
T ss_pred             EEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEEECcC
Confidence            99999999999999642          2345677889999999999999998   9999999999999999999999999


Q ss_pred             CCCccccCCCCC-ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhc
Q 003836          647 GLAKLLTLDQSH-TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQ  724 (792)
Q Consensus       647 g~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~  724 (792)
                      |+++........ ......++..|+|||.+.+..++.++|||||||++|||++ |..||.......   ..         
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~---~~---------  231 (288)
T cd05061         164 GMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ---VL---------  231 (288)
T ss_pred             CccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH---HH---------
Confidence            999865432221 1122235678999999998899999999999999999998 677875432110   00         


Q ss_pred             ccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          725 ERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       725 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                          ..+.+.. ....+......+.+++.+||+.+|++|||+.++++.|++.+
T Consensus       232 ----~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~  279 (288)
T cd05061         232 ----KFVMDGG-YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL  279 (288)
T ss_pred             ----HHHHcCC-CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence                0011110 01112233467899999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=3.7e-35  Score=307.32  Aligned_cols=251  Identities=26%  Similarity=0.436  Sum_probs=193.5

Q ss_pred             hhcCccccceEEEeeecC--CCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceec-cCCceEEEEEecc
Q 003836          507 EELGRGAFGTVYKGFVNM--GSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCD-EGQNRLLVYEFMS  582 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~--~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~-~~~~~~lV~E~~~  582 (792)
                      +.||+|+||.||+|....  .....+|+|++.... ....+.+.+|+.+++.++||||+++++++. .+...++|+||++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            368999999999997632  234679999986432 234567889999999999999999999875 4556789999999


Q ss_pred             CCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC---
Q 003836          583 NGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH---  658 (792)
Q Consensus       583 ~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~---  658 (792)
                      +|+|.+++... ..+.+..+..++.||+.||+|||+.   +++||||||+|||+++++.+||+|||+++........   
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~  157 (262)
T cd05058          81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVH  157 (262)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCcceeec
Confidence            99999999764 4567788899999999999999998   9999999999999999999999999999865432211   


Q ss_pred             ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCc-CCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhc
Q 003836          659 TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRR-NIDNEISKVDKAILTDWAYDRYQERTLEALVENDLE  737 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  737 (792)
                      ......++..|+|||.+....++.++||||||+++|||++|+. |+...... .   +...             +.....
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~-~---~~~~-------------~~~~~~  220 (262)
T cd05058         158 NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF-D---ITVY-------------LLQGRR  220 (262)
T ss_pred             ccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH-H---HHHH-------------HhcCCC
Confidence            1122345678999999988899999999999999999999655 44332111 0   0000             000001


Q ss_pred             ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          738 AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       738 ~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      ...+...+..+.+++.+||+.+|++||++.||++.|+++.
T Consensus       221 ~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~  260 (262)
T cd05058         221 LLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF  260 (262)
T ss_pred             CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence            1111223457889999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=1.7e-35  Score=319.66  Aligned_cols=238  Identities=23%  Similarity=0.266  Sum_probs=190.3

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHH-HhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVN-GIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~-~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      ++||+|+||.||++... .+++.+|+|++.+..   .....++.+|.. +++.++||||+++++++.+.+..++||||++
T Consensus         1 ~~lg~G~~g~Vy~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~   79 (321)
T cd05603           1 KVIGKGSFGKVLLAKRK-SDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVN   79 (321)
T ss_pred             CeeeeCCCEEEEEEEEC-CCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCC
Confidence            36999999999999754 456789999986532   222344555554 5788999999999999999999999999999


Q ss_pred             CCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          583 NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       583 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      +|+|..++.....+.+..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++...... .....
T Consensus        80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~~~~  155 (321)
T cd05603          80 GGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE-ETTST  155 (321)
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC-Ccccc
Confidence            999999988777888999999999999999999998   99999999999999999999999999987542222 22234


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCH
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV  742 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  742 (792)
                      ..||+.|+|||.+.+..++.++|||||||++|||++|+.||........   .             ..+....  ...+.
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~-------------~~i~~~~--~~~~~  217 (321)
T cd05603         156 FCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQM---Y-------------DNILHKP--LQLPG  217 (321)
T ss_pred             ccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHH---H-------------HHHhcCC--CCCCC
Confidence            5689999999999998999999999999999999999999965421100   0             0111111  11222


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHH
Q 003836          743 TMLHRFVMVAFWCIQEDPSHRPTMR  767 (792)
Q Consensus       743 ~~~~~l~~l~~~Cl~~~p~~RPs~~  767 (792)
                      .....+.+++.+||+.+|.+||+..
T Consensus       218 ~~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         218 GKTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             CCCHHHHHHHHHHccCCHhhcCCCC
Confidence            3456788999999999999999764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=2.1e-35  Score=293.56  Aligned_cols=260  Identities=20%  Similarity=0.213  Sum_probs=198.5

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEccccccc--chHHHHHHHHHhcccCCCCcccccceecc--CCceEEEEEecc
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLGYCDE--GQNRLLVYEFMS  582 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~--~~~~~~~Ei~~l~~l~h~niv~l~g~~~~--~~~~~lV~E~~~  582 (792)
                      +.|++|+||.||+|+. ..+.+.||+|+++.....  ---.-.+||.+|.+++|||||.+..+...  -+..|||||||+
T Consensus        82 nrI~EGtyGiVYRakd-k~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~E  160 (419)
T KOG0663|consen   82 NRIEEGTYGVVYRAKD-KKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVE  160 (419)
T ss_pred             hhcccCcceeEEEecc-CCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHH
Confidence            5699999999999974 456789999999754211  12356899999999999999999887754  457999999998


Q ss_pred             CCCccccccCCC-CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          583 NGTVASFLFGDS-KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       583 ~gsL~~~l~~~~-~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      . +|..++...+ ++...+..-+..|+++|++|||+.   .|+|||||++|+|++..|.+||+|||+||.+... ....+
T Consensus       161 h-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp-~k~~T  235 (419)
T KOG0663|consen  161 H-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREYGSP-LKPYT  235 (419)
T ss_pred             h-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhhcCC-cccCc
Confidence            8 8999998764 788999999999999999999999   9999999999999999999999999999988654 33445


Q ss_pred             cccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhh---HHHHHHHh-h---cccc------
Q 003836          662 AIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAI---LTDWAYDR-Y---QERT------  727 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~---~~~~~~~~-~---~~~~------  727 (792)
                      ..+-|..|+|||.+.+ ..|+...|+||+|||+.|+++++..|....+..+...   +...+.+. |   .+-.      
T Consensus       236 ~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~  315 (419)
T KOG0663|consen  236 PLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMT  315 (419)
T ss_pred             ceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccc
Confidence            6677999999999876 5799999999999999999999988866544322111   11111000 0   0000      


Q ss_pred             hhHhhhchhcccCCHH-HHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          728 LEALVENDLEAMNNVT-MLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       728 ~~~~~~~~~~~~~~~~-~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ........++..+... ..+.-.+++...|..||.+|.|++|.++.
T Consensus       316 f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h  361 (419)
T KOG0663|consen  316 FSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH  361 (419)
T ss_pred             cCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence            0011111122222211 34677889999999999999999988864

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=1.6e-35  Score=320.33  Aligned_cols=241  Identities=24%  Similarity=0.282  Sum_probs=191.5

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHH-HhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVN-GIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~-~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.||+|+||+||++... .+++.+|+|++....   .....++..|.. +++.++|+||+++++++.+.+..++||||++
T Consensus         1 ~~lg~G~fg~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~   79 (325)
T cd05602           1 KVIGKGSFGKVLLARHK-AEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYIN   79 (325)
T ss_pred             CeeeeCCCeEEEEEEEC-CCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCC
Confidence            36999999999999754 456789999987532   122334444544 5678899999999999999999999999999


Q ss_pred             CCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          583 NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       583 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      +|+|.+++.....+.+.....++.||++||.|||+.   +|+||||||+|||++.++.+||+|||+++...... .....
T Consensus        80 ~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~-~~~~~  155 (325)
T cd05602          80 GGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN-GTTST  155 (325)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCC-CCccc
Confidence            999999998877788889999999999999999998   99999999999999999999999999997543222 22334


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCH
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV  742 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  742 (792)
                      ..||+.|+|||++.+..++.++|||||||++|||++|+.||........   .             ..+.....  ....
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~-------------~~i~~~~~--~~~~  217 (325)
T cd05602         156 FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM---Y-------------DNILNKPL--QLKP  217 (325)
T ss_pred             ccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHH---H-------------HHHHhCCc--CCCC
Confidence            5689999999999999999999999999999999999999965432111   0             00111111  1122


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHhHH
Q 003836          743 TMLHRFVMVAFWCIQEDPSHRPTMRKVT  770 (792)
Q Consensus       743 ~~~~~l~~l~~~Cl~~~p~~RPs~~evl  770 (792)
                      .....+.+++.+||+.+|.+||++.+.+
T Consensus       218 ~~~~~~~~li~~~l~~~p~~R~~~~~~~  245 (325)
T cd05602         218 NITNSARHLLEGLLQKDRTKRLGAKDDF  245 (325)
T ss_pred             CCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence            3456788999999999999999987544

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=4.8e-35  Score=307.85  Aligned_cols=252  Identities=27%  Similarity=0.390  Sum_probs=191.1

Q ss_pred             hhcCccccceEEEeeecC-CCceEEEEEEcccccc-cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCC
Q 003836          507 EELGRGAFGTVYKGFVNM-GSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNG  584 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~-~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~g  584 (792)
                      +.||+|+||.||+|.... .....+++|+++.... .....+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG   80 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence            358999999999997643 3446799999875432 33457899999999999999999999999999999999999999


Q ss_pred             CccccccCC-----CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC-
Q 003836          585 TVASFLFGD-----SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH-  658 (792)
Q Consensus       585 sL~~~l~~~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~-  658 (792)
                      +|.+++...     ...++..+.+++.|++.||+|||+.   +++|+||||+||+++.++.+||+|||+++........ 
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~  157 (269)
T cd05087          81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV  157 (269)
T ss_pred             cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence            999998643     2356778889999999999999998   9999999999999999999999999999754332211 


Q ss_pred             ccccccccCCcccccccccC-------CCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhH
Q 003836          659 TNTAIRGTKGYVAPEWFRNM-------PITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEA  730 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~-------~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  730 (792)
                      ......++..|+|||++.+.       .++.++||||||+++|||++ |+.||.........    ...   ... ....
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~----~~~---~~~-~~~~  229 (269)
T cd05087         158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVL----TYT---VRE-QQLK  229 (269)
T ss_pred             cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHH----HHH---hhc-ccCC
Confidence            12234567889999998642       36889999999999999996 99998653221110    000   000 0001


Q ss_pred             hhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhc
Q 003836          731 LVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE  774 (792)
Q Consensus       731 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~  774 (792)
                      +..+..    .....+.+.+++..|+ .+|++|||++||+..|+
T Consensus       230 ~~~~~~----~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         230 LPKPRL----KLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             CCCCcc----CCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            111111    1123445777888998 58999999999999885

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=2.4e-35  Score=318.50  Aligned_cols=240  Identities=26%  Similarity=0.350  Sum_probs=193.9

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccC-CCCcccccceeccCCceEEEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTH-HKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~-h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      ++.+.||+|+||.||++... .+++.||+|++.+..   ....+.+..|+.+++.+. |++|+++++++.+.+..++|||
T Consensus         3 ~~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E   81 (323)
T cd05615           3 NFLMVLGKGSFGKVMLAERK-GTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME   81 (323)
T ss_pred             eEEEEEEecCCeEEEEEEEC-CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence            45678999999999999753 456789999987532   233456788888888875 6778889999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      |+++|+|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus        82 y~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~-~~  157 (323)
T cd05615          82 YVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG-VT  157 (323)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCCCC-cc
Confidence            999999999998878899999999999999999999998   99999999999999999999999999987543222 12


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      .....||+.|+|||.+.+..++.++|||||||++|||++|+.||........                ...+.....  .
T Consensus       158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~----------------~~~i~~~~~--~  219 (323)
T cd05615         158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL----------------FQSIMEHNV--S  219 (323)
T ss_pred             ccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHH----------------HHHHHhCCC--C
Confidence            2345689999999999998999999999999999999999999975432110                011111111  1


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCH
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTM  766 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~  766 (792)
                      .+...+.++.+++.+||+.+|.+|++.
T Consensus       220 ~p~~~~~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05615         220 YPKSLSKEAVSICKGLMTKHPSKRLGC  246 (323)
T ss_pred             CCccCCHHHHHHHHHHcccCHhhCCCC
Confidence            222345678899999999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.3e-35  Score=307.56  Aligned_cols=251  Identities=29%  Similarity=0.464  Sum_probs=202.3

Q ss_pred             HhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .+.+.++||+|++|.||++..+  ..+.++||.+... ....+++.+|+.++++++|+||+++++++......++||||+
T Consensus         7 ~~~i~~~ig~g~~~~v~~~~~~--~~~~~~vK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   83 (261)
T cd05034           7 SLKLERKLGAGQFGEVWMGTWN--GTTKVAVKTLKPG-TMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM   83 (261)
T ss_pred             heeeeeeeccCcceEEEEEEEc--CCceEEEEEecCC-ccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence            3445678999999999999754  3467999998754 334578999999999999999999999999989999999999


Q ss_pred             cCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          582 SNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       582 ~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      ++++|.+++...  ..+++..+..++.|++.||.|||+.   +++|+||||+||++++++.+||+|||+++.........
T Consensus        84 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~  160 (261)
T cd05034          84 SKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTA  160 (261)
T ss_pred             CCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccchhhhh
Confidence            999999999764  3689999999999999999999998   99999999999999999999999999998765322222


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      ......+..|+|||.+.+..++.++||||||++++|+++ |+.||.......   .+..             + ......
T Consensus       161 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~---~~~~-------------~-~~~~~~  223 (261)
T cd05034         161 REGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNRE---VLEQ-------------V-ERGYRM  223 (261)
T ss_pred             hhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHH-------------H-HcCCCC
Confidence            222334668999999998889999999999999999998 898885432210   0000             0 011111


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhcc
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEG  775 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~  775 (792)
                      ..+...+.++.+++.+||+.+|++||+++++.+.|+.
T Consensus       224 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         224 PRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            1122235678899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=4.7e-35  Score=309.74  Aligned_cols=249  Identities=23%  Similarity=0.369  Sum_probs=196.1

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccc-cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      .+.+.||+|+||.||+|... .+++.+|+|++... .....+.+.+|++++++++||||+++++++...+..++||||++
T Consensus         4 ~~~~~lg~g~~~~v~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   82 (279)
T cd06619           4 QYQEILGHGNGGTVYKAYHL-LTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMD   82 (279)
T ss_pred             hheeeeccCCCeEEEEEEEc-CCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCC
Confidence            34578999999999999654 45678999998653 23345679999999999999999999999999999999999999


Q ss_pred             CCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          583 NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       583 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      +++|..+.    .+++..+..++.|++.||.|||+.   +|+|+||||+|||++.++.+||+|||++......   ....
T Consensus        83 ~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~---~~~~  152 (279)
T cd06619          83 GGSLDVYR----KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS---IAKT  152 (279)
T ss_pred             CCChHHhh----cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceecccc---cccC
Confidence            99997653    467888899999999999999998   9999999999999999999999999999865322   2233


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCH
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV  742 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  742 (792)
                      ..++..|+|||.+.+..++.++||||||+++|||++|+.||...............         ...+.+.........
T Consensus       153 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~  223 (279)
T cd06619         153 YVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQL---------LQCIVDEDPPVLPVG  223 (279)
T ss_pred             CCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHH---------HHHHhccCCCCCCCC
Confidence            46899999999999989999999999999999999999998653221111000000         011111111111112


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          743 TMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       743 ~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ....++.+++.+||+.+|++||+++|+++.
T Consensus       224 ~~~~~~~~li~~~l~~~P~~Rp~~~eil~~  253 (279)
T cd06619         224 QFSEKFVHFITQCMRKQPKERPAPENLMDH  253 (279)
T ss_pred             cCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence            244578899999999999999999999873

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=4e-35  Score=306.81  Aligned_cols=251  Identities=26%  Similarity=0.415  Sum_probs=200.3

Q ss_pred             HHhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          501 VTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       501 ~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      ..+.+.++||+|+||.||++...  .+..+++|.+... ....+.+.+|+.++++++|+||+++.+++.+ ...+++|||
T Consensus         6 ~~~~~~~~lg~g~~~~vy~~~~~--~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~   81 (260)
T cd05073           6 ESLKLEKKLGAGQFGEVWMATYN--KHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEF   81 (260)
T ss_pred             cceeEEeEecCccceEEEEEEec--CCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEe
Confidence            34556788999999999999754  3346999988753 2345678999999999999999999999887 778999999


Q ss_pred             ccCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          581 MSNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       581 ~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      +++++|.+++...  ..+++..+..++.|++.||.|||+.   +++|+||||+||+++.++.+||+|||.++........
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~  158 (260)
T cd05073          82 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT  158 (260)
T ss_pred             CCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccCCCcc
Confidence            9999999999753  4578889999999999999999998   9999999999999999999999999999876433322


Q ss_pred             ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhc
Q 003836          659 TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLE  737 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  737 (792)
                      ......++..|+|||.+....++.++||||||++++++++ |+.||.........    .    .         +.....
T Consensus       159 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~----~----~---------~~~~~~  221 (260)
T cd05073         159 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI----R----A---------LERGYR  221 (260)
T ss_pred             cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHH----H----H---------HhCCCC
Confidence            2223345678999999998889999999999999999999 88888643221100    0    0         011111


Q ss_pred             ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhcc
Q 003836          738 AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEG  775 (792)
Q Consensus       738 ~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~  775 (792)
                      .......+..+.+++.+|++.+|++||++.+++++|+.
T Consensus       222 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         222 MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             CCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            11122345678899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=3e-35  Score=309.55  Aligned_cols=255  Identities=22%  Similarity=0.302  Sum_probs=202.6

Q ss_pred             HhhhhhhcCccccceEEEeeecCC--CceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEE
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMG--SSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~--~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~  578 (792)
                      ...+.+.||+|+||.||+|.....  ....+++|+..... ....+.+.+|+.++++++|+||+++++++.+ ...++||
T Consensus         7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~   85 (270)
T cd05056           7 DITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVM   85 (270)
T ss_pred             hceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEE
Confidence            344567899999999999976432  23578999887654 3445689999999999999999999999875 4578999


Q ss_pred             EeccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC
Q 003836          579 EFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       579 E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      ||+++|+|.+++... ..+++..+..++.|++.||+|||+.   +++|+||||+|||++.++.+||+|||+++.......
T Consensus        86 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~  162 (270)
T cd05056          86 ELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESY  162 (270)
T ss_pred             EcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeecccccc
Confidence            999999999999764 4589999999999999999999998   999999999999999999999999999987654432


Q ss_pred             CccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          658 HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       658 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                      .......++..|+|||.+....++.++||||||++++|+++ |..||..........        ....         ..
T Consensus       163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~--------~~~~---------~~  225 (270)
T cd05056         163 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIG--------RIEN---------GE  225 (270)
T ss_pred             eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH--------HHHc---------CC
Confidence            22223334568999999988889999999999999999986 999986543221100        0000         00


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      ....+...+..+.+++.+|+..+|++|||+.++++.|+++.
T Consensus       226 ~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~  266 (270)
T cd05056         226 RLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDIL  266 (270)
T ss_pred             cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            11112234567889999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=2.1e-35  Score=316.94  Aligned_cols=258  Identities=26%  Similarity=0.353  Sum_probs=202.0

Q ss_pred             HHhhhhhhcCccccceEEEeeecC------CCceEEEEEEccccc-ccchHHHHHHHHHhccc-CCCCcccccceeccCC
Q 003836          501 VTRGFKEELGRGAFGTVYKGFVNM------GSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQ  572 (792)
Q Consensus       501 ~~~~~~~~lG~G~~g~Vy~g~~~~------~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~  572 (792)
                      ..+.+.+.||+|+||.||++....      .....+|+|.+.... .....++.+|+++++++ +|+||+++++++.+.+
T Consensus        18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~   97 (307)
T cd05098          18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG   97 (307)
T ss_pred             HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence            345567899999999999986532      122469999987532 33446788999999999 7999999999999999


Q ss_pred             ceEEEEEeccCCCccccccCC----------------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEc
Q 003836          573 NRLLVYEFMSNGTVASFLFGD----------------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLD  636 (792)
Q Consensus       573 ~~~lV~E~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~  636 (792)
                      ..++||||+++|+|.+++...                ..+++.++++++.|++.||+|||+.   +++|+||||+|||++
T Consensus        98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill~  174 (307)
T cd05098          98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVT  174 (307)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheEEc
Confidence            999999999999999999653                2478889999999999999999998   999999999999999


Q ss_pred             CCCCeEEeecCCCccccCCCCCc-cccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhh
Q 003836          637 DHYNARISDFGLAKLLTLDQSHT-NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAI  714 (792)
Q Consensus       637 ~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~  714 (792)
                      .++.+||+|||.++......... .....+++.|+|||.+.+..++.++|||||||++|||++ |+.||.......    
T Consensus       175 ~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~----  250 (307)
T cd05098         175 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE----  250 (307)
T ss_pred             CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHH----
Confidence            99999999999997654322111 112234568999999998889999999999999999998 777775432110    


Q ss_pred             HHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          715 LTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                                   +...+........+...+.++.+++.+||+.+|++||++.+|++.|+.+++
T Consensus       251 -------------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~  301 (307)
T cd05098         251 -------------LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILA  301 (307)
T ss_pred             -------------HHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHH
Confidence                         000111111112223345688899999999999999999999999988654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=4.1e-35  Score=314.72  Aligned_cols=262  Identities=22%  Similarity=0.315  Sum_probs=200.1

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      .+.+.||+|+||.||++... .++..+|+|.+.... .....++.+|++++.+++||||+++++++.+++..++||||++
T Consensus         4 ~~~~~lg~G~~g~v~~~~~~-~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~   82 (308)
T cd06615           4 EKLGELGAGNGGVVTKVLHR-PSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMD   82 (308)
T ss_pred             eEEeeccCCCCeEEEEEEEc-CCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccC
Confidence            34578999999999999754 456789999886532 2334678899999999999999999999999999999999999


Q ss_pred             CCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          583 NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       583 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      +++|.+++.....+++..+..++.||++||.|||+.  .+++|+||||+|||++.++.+||+|||++......   ....
T Consensus        83 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---~~~~  157 (308)
T cd06615          83 GGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS  157 (308)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEecCCcEEEccCCCccccccc---cccc
Confidence            999999998878889999999999999999999973  28999999999999999999999999998755322   1223


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcc-----------------
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQE-----------------  725 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-----------------  725 (792)
                      ..+++.|+|||.+.+..++.++||||||+++|||++|+.||...........+.. .......                 
T Consensus       158 ~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  236 (308)
T cd06615         158 FVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGR-PVSEGEAKESHRPVSGHPPDSPRP  236 (308)
T ss_pred             CCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcC-ccccccccCCcccccCCCCCccch
Confidence            4688999999999888899999999999999999999999864322111000000 0000000                 


Q ss_pred             cchhHhhhchh---cccC-CHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          726 RTLEALVENDL---EAMN-NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       726 ~~~~~~~~~~~---~~~~-~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ....++.+...   .... ......++.+++.+||+.+|++||+++||++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  287 (308)
T cd06615         237 MAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH  287 (308)
T ss_pred             hhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            00000111000   0000 11245578899999999999999999999985

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=2.2e-35  Score=335.11  Aligned_cols=250  Identities=24%  Similarity=0.292  Sum_probs=198.8

Q ss_pred             HhhhhhhcCccccceEEEeeecCCCceEEEEEEcccc--cccchHHHHHHHHHhcccCCCCcccccceeccCC-------
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV--FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQ-------  572 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~-------  572 (792)
                      .+.+.+.||+|+||+||++... .+++.||||++...  .......+.+|+..+..++|+||++++..+....       
T Consensus        33 rY~i~~~LG~G~fG~Vy~a~~~-~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~  111 (496)
T PTZ00283         33 KYWISRVLGSGATGTVLCAKRV-SDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENV  111 (496)
T ss_pred             CEEEEEEEecCCCEEEEEEEEc-CCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccc
Confidence            3456688999999999999753 45679999998653  2334567889999999999999999988774332       


Q ss_pred             -ceEEEEEeccCCCccccccCC----CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecC
Q 003836          573 -NRLLVYEFMSNGTVASFLFGD----SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFG  647 (792)
Q Consensus       573 -~~~lV~E~~~~gsL~~~l~~~----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg  647 (792)
                       ..++||||+++|+|.+++...    ..+++..+..++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||
T Consensus       112 ~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~DFG  188 (496)
T PTZ00283        112 LMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLGDFG  188 (496)
T ss_pred             eEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEEecc
Confidence             367999999999999988643    4678889999999999999999998   99999999999999999999999999


Q ss_pred             CCccccCCCC-CccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhccc
Q 003836          648 LAKLLTLDQS-HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQER  726 (792)
Q Consensus       648 ~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~  726 (792)
                      +++....... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||........       .       
T Consensus       189 ls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~-------~-------  254 (496)
T PTZ00283        189 FSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEV-------M-------  254 (496)
T ss_pred             cCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH-------H-------
Confidence            9987653322 223346799999999999999999999999999999999999999965422100       0       


Q ss_pred             chhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          727 TLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       727 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                        ....... ....+...+.++.+++.+||+.+|.+||++.+++++
T Consensus       255 --~~~~~~~-~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        255 --HKTLAGR-YDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             --HHHhcCC-CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence              0001000 111223445678899999999999999999999864

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=5.7e-36  Score=321.35  Aligned_cols=247  Identities=24%  Similarity=0.320  Sum_probs=208.1

Q ss_pred             hhhhcCccccceEEEeeecCCCc--eEEEEEEccccccc-chHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSS--NHVAVKKLNSVFQD-SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~--~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +.|+||+|.||.|++|.+...++  ..||||.++..... ...+|.+|+.+|.+|+|+|+++|||+..+ ....+|+|.+
T Consensus       114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELa  192 (1039)
T KOG0199|consen  114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELA  192 (1039)
T ss_pred             HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhc
Confidence            45789999999999999876444  57999999865443 67899999999999999999999999988 7889999999


Q ss_pred             cCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          582 SNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       582 ~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      +.|||.+.|++.  ..+-......++.|||.||.||..+   +.|||||.++|+||-....+||+|||+.+-+...+...
T Consensus       193 plGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Y  269 (1039)
T KOG0199|consen  193 PLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMY  269 (1039)
T ss_pred             ccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCCCCcce
Confidence            999999999873  3567788889999999999999999   99999999999999999999999999999887665544


Q ss_pred             ccc--ccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          660 NTA--IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       660 ~~~--~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                      ...  ..-...|.|||.+....|+.++|||+|||.||||+| |+.||-....                 ..+...+|..-
T Consensus       270 vm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g-----------------~qIL~~iD~~e  332 (1039)
T KOG0199|consen  270 VMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG-----------------IQILKNIDAGE  332 (1039)
T ss_pred             EecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH-----------------HHHHHhccccc
Confidence            221  234568999999999999999999999999999998 4566643211                 12233444445


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      +...+..++++++++++.||..+|++|||+..|.+.
T Consensus       333 rLpRPk~csedIY~imk~cWah~paDRptFsair~~  368 (1039)
T KOG0199|consen  333 RLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED  368 (1039)
T ss_pred             cCCCCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence            555677889999999999999999999999999743

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=5.6e-35  Score=311.91  Aligned_cols=260  Identities=22%  Similarity=0.328  Sum_probs=198.1

Q ss_pred             hhhhhhcCccccceEEEeeec---------------CCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccc
Q 003836          503 RGFKEELGRGAFGTVYKGFVN---------------MGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLG  566 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~---------------~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g  566 (792)
                      +.+.+.||+|+||.||++...               .++...+|+|++.... .....++.+|+.++++++|+||+++++
T Consensus         7 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~   86 (296)
T cd05095           7 LTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLA   86 (296)
T ss_pred             ceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEE
Confidence            456678999999999997532               2234579999987542 334568999999999999999999999


Q ss_pred             eeccCCceEEEEEeccCCCccccccCCC-----------CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEE
Q 003836          567 YCDEGQNRLLVYEFMSNGTVASFLFGDS-----------KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILL  635 (792)
Q Consensus       567 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~-----------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl  635 (792)
                      ++...+..++||||+++++|.+++....           .+++..+.+++.||+.||+|||+.   +++|+||||+|||+
T Consensus        87 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~Nili  163 (296)
T cd05095          87 VCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRNCLV  163 (296)
T ss_pred             EEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChheEEE
Confidence            9999999999999999999999986532           356778999999999999999998   99999999999999


Q ss_pred             cCCCCeEEeecCCCccccCCCCCc-cccccccCCcccccccccCCCCcccceehHHHHHHHHHh--cCcCCCcchhhhhh
Q 003836          636 DDHYNARISDFGLAKLLTLDQSHT-NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC--LRRNIDNEISKVDK  712 (792)
Q Consensus       636 ~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t--g~~p~~~~~~~~~~  712 (792)
                      ++++.+||+|||+++.+....... .....+++.|+|||......++.++|||||||++|||++  |..||.........
T Consensus       164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~  243 (296)
T cd05095         164 GKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVI  243 (296)
T ss_pred             cCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHH
Confidence            999999999999998654322211 112234678999999888889999999999999999998  66777543221110


Q ss_pred             hhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhcc
Q 003836          713 AILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEG  775 (792)
Q Consensus       713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~  775 (792)
                      .....+    +.....      ......+...+..+.+++.+||+.+|.+||++.||.+.|+.
T Consensus       244 ~~~~~~----~~~~~~------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  296 (296)
T cd05095         244 ENTGEF----FRDQGR------QVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE  296 (296)
T ss_pred             HHHHHH----Hhhccc------cccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence            000000    000000      00001122244678899999999999999999999998863

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=3.9e-35  Score=311.86  Aligned_cols=253  Identities=24%  Similarity=0.370  Sum_probs=199.3

Q ss_pred             hhhhhhcCccccceEEEeeecC----CCceEEEEEEcccccc-cchHHHHHHHHHhcccCCCCcccccceeccCCceEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNM----GSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLV  577 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~----~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV  577 (792)
                      +.+.+.||+|+||.||++....    .+...+|+|++..... ...+++.+|+.++++++||||+++++++.++...++|
T Consensus         7 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv   86 (288)
T cd05050           7 IEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLL   86 (288)
T ss_pred             ceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEE
Confidence            3445789999999999997532    2457899999875432 3456799999999999999999999999999999999


Q ss_pred             EEeccCCCccccccCC----------------------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEE
Q 003836          578 YEFMSNGTVASFLFGD----------------------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILL  635 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl  635 (792)
                      |||+++|+|.+++...                      ..+++..++.++.|++.||+|||+.   +++||||||+|||+
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~nil~  163 (288)
T cd05050          87 FEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATRNCLV  163 (288)
T ss_pred             EecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHhheEe
Confidence            9999999999998642                      1367788899999999999999998   99999999999999


Q ss_pred             cCCCCeEEeecCCCccccCCCCC-ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhh
Q 003836          636 DDHYNARISDFGLAKLLTLDQSH-TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKA  713 (792)
Q Consensus       636 ~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~  713 (792)
                      ++++.+||+|||+++........ .......+..|+|||.+.+..++.++|||||||++|||++ |..||.......   
T Consensus       164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~---  240 (288)
T cd05050         164 GENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEE---  240 (288)
T ss_pred             cCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH---
Confidence            99999999999998865433221 1122234668999999998899999999999999999998 777875432210   


Q ss_pred             hHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhcc
Q 003836          714 ILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEG  775 (792)
Q Consensus       714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~  775 (792)
                          .. .......        . ...+...+.++.+++.+||+.+|++|||+.|+++.|++
T Consensus       241 ----~~-~~~~~~~--------~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         241 ----VI-YYVRDGN--------V-LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             ----HH-HHHhcCC--------C-CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence                00 0001111        0 11122345678999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=9.3e-36  Score=324.88  Aligned_cols=251  Identities=27%  Similarity=0.386  Sum_probs=212.3

Q ss_pred             hhhcCccccceEEEeeecCCC---ceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          506 KEELGRGAFGTVYKGFVNMGS---SNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~---~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .++||+|+||+||||.+--..   .-+||+|++.... .+..+++.+|+-+|.+++||||++|+|+|.... ..||.+||
T Consensus       701 ~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~m  779 (1177)
T KOG1025|consen  701 DKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQLM  779 (1177)
T ss_pred             hceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHhc
Confidence            467999999999999874322   2379999886543 445689999999999999999999999998877 88999999


Q ss_pred             cCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          582 SNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       582 ~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +.|+|.+|++.+ ..+..+..+.|..|||+||.|||++   +++||||.++|||+.+-..+||.|||+++.+..+.....
T Consensus       780 P~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~  856 (1177)
T KOG1025|consen  780 PLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYS  856 (1177)
T ss_pred             ccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccCccccccc
Confidence            999999999765 5788899999999999999999998   999999999999999999999999999999887765544


Q ss_pred             cc-ccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          661 TA-IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       661 ~~-~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      .. ..-.+.|||-|.++...|+.++|||||||.+||++| |..|++....                 +.+.+++....+.
T Consensus       857 ~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~-----------------~eI~dlle~geRL  919 (1177)
T KOG1025|consen  857 APGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPA-----------------EEIPDLLEKGERL  919 (1177)
T ss_pred             ccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCH-----------------HHhhHHHhccccC
Confidence            33 334668999999999999999999999999999998 6677765432                 2334445555556


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      ..++....++..++.+||-.|+..||+++++...+.++.
T Consensus       920 sqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~a  958 (1177)
T KOG1025|consen  920 SQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMA  958 (1177)
T ss_pred             CCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHh
Confidence            667788899999999999999999999999998876654

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=4.9e-35  Score=308.80  Aligned_cols=251  Identities=25%  Similarity=0.377  Sum_probs=200.4

Q ss_pred             hhhcCccccceEEEeeecC----CCceEEEEEEccccccc-chHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          506 KEELGRGAFGTVYKGFVNM----GSSNHVAVKKLNSVFQD-SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~----~~~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      .+.||+|+||.||+|....    ...+.+++|.+...... ..+++.+|++++++++|+||+++++++.+.+..++||||
T Consensus        10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   89 (275)
T cd05046          10 ITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEY   89 (275)
T ss_pred             eeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEEe
Confidence            4679999999999998642    23467999988764333 457899999999999999999999999999999999999


Q ss_pred             ccCCCccccccCCC---------CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCcc
Q 003836          581 MSNGTVASFLFGDS---------KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKL  651 (792)
Q Consensus       581 ~~~gsL~~~l~~~~---------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~  651 (792)
                      +++|+|.+++....         .+++..+..++.|++.||+|||+.   +|+|+||||+|||++.++.++|+|||+++.
T Consensus        90 ~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~~~~~~~  166 (275)
T cd05046          90 TDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSLLSLSKD  166 (275)
T ss_pred             cCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEcccccccc
Confidence            99999999997654         689999999999999999999998   999999999999999999999999999876


Q ss_pred             ccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhH
Q 003836          652 LTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEA  730 (792)
Q Consensus       652 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  730 (792)
                      .............++..|+|||.+.+...+.++||||||+++++|++ |..||.......   ..     .....     
T Consensus       167 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~---~~-----~~~~~-----  233 (275)
T cd05046         167 VYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE---VL-----NRLQA-----  233 (275)
T ss_pred             cCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH---HH-----HHHHc-----
Confidence            54333323333456778999999988889999999999999999999 777875432110   00     00000     


Q ss_pred             hhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhcc
Q 003836          731 LVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEG  775 (792)
Q Consensus       731 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~  775 (792)
                         .......+...+..+.+++.+||+.+|++||++.|++++|++
T Consensus       234 ---~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~  275 (275)
T cd05046         234 ---GKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE  275 (275)
T ss_pred             ---CCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence               011111122344678899999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=5.2e-35  Score=308.99  Aligned_cols=244  Identities=26%  Similarity=0.373  Sum_probs=192.4

Q ss_pred             cCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCCC
Q 003836          509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGT  585 (792)
Q Consensus       509 lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~gs  585 (792)
                      ||+|+||.||++... .+++.+|+|++....   ....+.+..|++++++++||||+++++++.++...++||||+++++
T Consensus         1 lg~G~~g~Vy~~~~~-~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~   79 (277)
T cd05607           1 LGKGGFGEVCAVQVK-NTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGD   79 (277)
T ss_pred             CCCCCceEEEEEEEc-cCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCC
Confidence            799999999999754 456799999986422   1234456679999999999999999999999999999999999999


Q ss_pred             ccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccccc
Q 003836          586 VASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAI  663 (792)
Q Consensus       586 L~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  663 (792)
                      |.+++...  ..+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||++.......  .....
T Consensus        80 L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~--~~~~~  154 (277)
T cd05607          80 LKYHIYNVGERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK--TITQR  154 (277)
T ss_pred             HHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc--eeecc
Confidence            99888544  3578889999999999999999998   99999999999999999999999999998654322  22234


Q ss_pred             cccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHH
Q 003836          664 RGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVT  743 (792)
Q Consensus       664 ~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  743 (792)
                      .|+..|+|||++.+..++.++|||||||++|||++|+.||............   ..         ........ .....
T Consensus       155 ~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~---~~---------~~~~~~~~-~~~~~  221 (277)
T cd05607         155 AGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEEL---KR---------RTLEDEVK-FEHQN  221 (277)
T ss_pred             CCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHH---HH---------Hhhccccc-ccccc
Confidence            5899999999999888999999999999999999999998653221111000   00         00000000 00113


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          744 MLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       744 ~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ...++.+++..||+.||++||+++|+++
T Consensus       222 ~~~~~~~li~~~L~~~P~~R~~~~~~~~  249 (277)
T cd05607         222 FTEESKDICRLFLAKKPEDRLGSREKND  249 (277)
T ss_pred             CCHHHHHHHHHHhccCHhhCCCCccchh
Confidence            4567889999999999999999976653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=6e-35  Score=309.74  Aligned_cols=262  Identities=23%  Similarity=0.275  Sum_probs=204.6

Q ss_pred             HHhhhhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          501 VTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       501 ~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      ..+.+.+.||+|+||+||++... ..++.+|+|++.... ....+.+.+|+++++.++|+||+++++++.....+++|||
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   83 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHI-PTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCME   83 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEc-CCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEe
Confidence            34556789999999999999754 346789999876543 3345789999999999999999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      |+++++|.+++...+.+++.....++.+++.||.|||+.  .+++|+||+|+||++++++.++|+|||++.......   
T Consensus        84 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~---  158 (284)
T cd06620          84 FMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI---  158 (284)
T ss_pred             cCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc---
Confidence            999999999988777889999999999999999999974  289999999999999999999999999987542211   


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      .....|+..|+|||.+.+..++.++|||||||++|||++|+.||.......+.....    .... .....+........
T Consensus       159 ~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~  233 (284)
T cd06620         159 ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDP----MGIL-DLLQQIVQEPPPRL  233 (284)
T ss_pred             cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhh----hHHH-HHHHHHhhccCCCC
Confidence            123468999999999988899999999999999999999999997543321100000    0000 00111111111111


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHh
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQML  773 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L  773 (792)
                      .....+.++.+++.+||+.+|++||+++|++++.
T Consensus       234 ~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~  267 (284)
T cd06620         234 PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP  267 (284)
T ss_pred             CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence            1122456788999999999999999999999864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=9.3e-36  Score=287.64  Aligned_cols=246  Identities=25%  Similarity=0.351  Sum_probs=200.0

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccccc----c----chHHHHHHHHHhccc-CCCCcccccceeccCCceE
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ----D----SEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRL  575 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~----~----~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~  575 (792)
                      -++.||+|..++|-++... .++...|+|++.....    .    -.+.-..|+.+|+++ -||+|+++.++++.+...+
T Consensus        21 pkeilgrgvss~vrRci~k-~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~F   99 (411)
T KOG0599|consen   21 PKEILGRGVSSVVRRCIHK-ETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFVF   99 (411)
T ss_pred             hHHHhcccchhhhhhhhhc-ccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhh
Confidence            3578999999999998654 5567888888754221    1    123456799999998 5999999999999999999


Q ss_pred             EEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCC
Q 003836          576 LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD  655 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~  655 (792)
                      +|+|.|+.|.|.++|.+.-.++++...+|+.|+..|++|||.+   .||||||||+|||+|++.++||+|||++..+.+ 
T Consensus       100 lVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDFGFa~~l~~-  175 (411)
T KOG0599|consen  100 LVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDFGFACQLEP-  175 (411)
T ss_pred             hhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEeccceeeccCC-
Confidence            9999999999999999888899999999999999999999999   999999999999999999999999999997754 


Q ss_pred             CCCccccccccCCccccccccc------CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchh
Q 003836          656 QSHTNTAIRGTKGYVAPEWFRN------MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLE  729 (792)
Q Consensus       656 ~~~~~~~~~gt~~y~aPE~~~~------~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  729 (792)
                       ....+..+|||+|+|||.+..      ..|+...|+|+.||++|.|+.|..||-...+....                .
T Consensus       176 -GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlML----------------R  238 (411)
T KOG0599|consen  176 -GEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLML----------------R  238 (411)
T ss_pred             -chhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHH----------------H
Confidence             344567899999999998853      35888999999999999999999999654322111                1


Q ss_pred             Hhhhchhccc--CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          730 ALVENDLEAM--NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       730 ~~~~~~~~~~--~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .++.....-.  .=.+.+....+++.+||+.||.+|.|.+|+++.
T Consensus       239 ~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH  283 (411)
T KOG0599|consen  239 MIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH  283 (411)
T ss_pred             HHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence            1111111111  112456778899999999999999999999863

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=3e-35  Score=307.39  Aligned_cols=252  Identities=27%  Similarity=0.419  Sum_probs=200.6

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchH--HHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEK--EFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~--~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .+.+.||+|+||+||++... ..++.+|+|++.........  ...+|+.++++++|+||+++++++.+....++||||+
T Consensus         2 ~~~~~lg~G~~g~v~~~~~~-~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    2 RLVKKLGSGGFGTVYKAKNK-KNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEESSEEEEEEEET-TTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             EEeEEEEeCCCEEEEEEEEC-CCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            35678999999999999754 55678999999876443332  3456999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      ++++|.+++.....+++..+..++.||++||++||+.   +|+|+||||+||++++++.++|+|||.+... ........
T Consensus        81 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~-~~~~~~~~  156 (260)
T PF00069_consen   81 PGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKL-SENNENFN  156 (260)
T ss_dssp             TTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEES-TSTTSEBS
T ss_pred             ccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccc-cccccccc
Confidence            9999999998778889999999999999999999998   9999999999999999999999999999764 12222333


Q ss_pred             cccccCCcccccccc-cCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          662 AIRGTKGYVAPEWFR-NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~-~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ...++..|+|||.+. +..++.++||||+|+++++|++|+.|+................     ..   ........   
T Consensus       157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~-----~~---~~~~~~~~---  225 (260)
T PF00069_consen  157 PFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKIL-----KR---PLPSSSQQ---  225 (260)
T ss_dssp             SSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHH-----HT---HHHHHTTS---
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcc-----cc---cccccccc---
Confidence            456899999999998 8889999999999999999999999997651111111110000     00   00000000   


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .......+.+++.+||+.||++||++.++++
T Consensus       226 ~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  226 SREKSEELRDLIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             HTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred             cchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            0011278899999999999999999999987

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=1e-34  Score=301.97  Aligned_cols=247  Identities=26%  Similarity=0.400  Sum_probs=198.7

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEccccccc-chHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCCC
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD-SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGT  585 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~gs  585 (792)
                      ++||+|++|.||++....  ++.+++|++...... ....+.+|++++++++|+||+++++++.+....++||||+++++
T Consensus         1 ~~lg~g~~g~v~~~~~~~--~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~   78 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG--NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGS   78 (251)
T ss_pred             CccccCCCceEEEEEEeC--CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCc
Confidence            369999999999997653  678999998765433 45689999999999999999999999999999999999999999


Q ss_pred             ccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc-ccc
Q 003836          586 VASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN-TAI  663 (792)
Q Consensus       586 L~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~-~~~  663 (792)
                      |.+++... ..+++..+..++.+++.||+|||+.   +++||||||+|||++.++.+||+|||+++.......... ...
T Consensus        79 l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~  155 (251)
T cd05041          79 LLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLK  155 (251)
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccC
Confidence            99998653 4678899999999999999999998   999999999999999999999999999986542221111 112


Q ss_pred             cccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCH
Q 003836          664 RGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV  742 (792)
Q Consensus       664 ~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  742 (792)
                      ..+..|+|||.+.+..++.++||||||++++||++ |..||.........                 ..+........+.
T Consensus       156 ~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~-----------------~~~~~~~~~~~~~  218 (251)
T cd05041         156 QIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTR-----------------ERIESGYRMPAPQ  218 (251)
T ss_pred             cceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHH-----------------HHHhcCCCCCCCc
Confidence            23567999999988899999999999999999999 77787543221110                 0011111111223


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHhHHHHhcc
Q 003836          743 TMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEG  775 (792)
Q Consensus       743 ~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~  775 (792)
                      ..+..+.+++.+||+.+|.+||+++|+++.|+.
T Consensus       219 ~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~  251 (251)
T cd05041         219 LCPEEIYRLMLQCWAYDPENRPSFSEIYNELQI  251 (251)
T ss_pred             cCCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence            345678999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=6.4e-35  Score=306.73  Aligned_cols=245  Identities=22%  Similarity=0.297  Sum_probs=196.3

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCCCc
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTV  586 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~gsL  586 (792)
                      ..||+|+||.||+|... .++..|++|.+........+.+.+|+.++++++|+||+++++++..++..++|+||+++++|
T Consensus        14 ~~lg~g~~g~v~~~~~~-~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L   92 (268)
T cd06624          14 VVLGKGTYGIVYAARDL-STQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSL   92 (268)
T ss_pred             EEEecCCceEEEEeEec-CCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCH
Confidence            47999999999999754 45678999998776666677899999999999999999999999999999999999999999


Q ss_pred             cccccCC-CCC--chhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC-CCCeEEeecCCCccccCCCCCcccc
Q 003836          587 ASFLFGD-SKP--NWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD-HYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       587 ~~~l~~~-~~l--~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~-~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      .+++... ..+  ++..+..++.||+.||+|||+.   +|+|+||||+||+++. ++.+||+|||++........ ....
T Consensus        93 ~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~-~~~~  168 (268)
T cd06624          93 SALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINP-CTET  168 (268)
T ss_pred             HHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhheecccCCC-cccc
Confidence            9999764 444  7888899999999999999998   9999999999999986 67999999999876543221 2223


Q ss_pred             ccccCCcccccccccC--CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          663 IRGTKGYVAPEWFRNM--PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~--~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ..+++.|+|||.+...  .++.++||||||+++|+|++|+.||..........    +.           ..........
T Consensus       169 ~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~----~~-----------~~~~~~~~~~  233 (268)
T cd06624         169 FTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAM----FK-----------VGMFKIHPEI  233 (268)
T ss_pred             CCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhH----hh-----------hhhhccCCCC
Confidence            3578999999998664  37899999999999999999999986432110000    00           0000011122


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      +.....++.+++.+||+.+|.+|||+.|+++
T Consensus       234 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  264 (268)
T cd06624         234 PESLSAEAKNFILRCFEPDPDKRASAHDLLQ  264 (268)
T ss_pred             CcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence            3345567889999999999999999999987

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=6.3e-35  Score=314.26  Aligned_cols=255  Identities=24%  Similarity=0.360  Sum_probs=199.4

Q ss_pred             hhhhhhcCccccceEEEeeec------CCCceEEEEEEccccc-ccchHHHHHHHHHhccc-CCCCcccccceeccCCce
Q 003836          503 RGFKEELGRGAFGTVYKGFVN------MGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNR  574 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~------~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~  574 (792)
                      ..+.++||+|+||.||++...      ......+|+|+++... .....++.+|+++++++ +|+||+++++++.+....
T Consensus        14 ~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~   93 (314)
T cd05099          14 LVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPL   93 (314)
T ss_pred             eeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCce
Confidence            345678999999999998642      1234579999987532 23356788999999999 699999999999999999


Q ss_pred             EEEEEeccCCCccccccCC----------------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC
Q 003836          575 LLVYEFMSNGTVASFLFGD----------------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH  638 (792)
Q Consensus       575 ~lV~E~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~  638 (792)
                      ++||||+++|+|.+++...                ..+++..+.+++.||+.||.|||+.   +|+|+||||+|||++++
T Consensus        94 ~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill~~~  170 (314)
T cd05099          94 YVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVLVTED  170 (314)
T ss_pred             EEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEEEcCC
Confidence            9999999999999998542                2478889999999999999999998   99999999999999999


Q ss_pred             CCeEEeecCCCccccCCCCCc-cccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHH
Q 003836          639 YNARISDFGLAKLLTLDQSHT-NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILT  716 (792)
Q Consensus       639 ~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~  716 (792)
                      +.+||+|||+++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..||........     
T Consensus       171 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~-----  245 (314)
T cd05099         171 NVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEEL-----  245 (314)
T ss_pred             CcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHH-----
Confidence            999999999998664322211 112234567999999998899999999999999999999 7888754321100     


Q ss_pred             HHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          717 DWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                         .....         .......+...+.++.+++.+||+.+|++||++.|+++.|+++.
T Consensus       246 ---~~~~~---------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~  294 (314)
T cd05099         246 ---FKLLR---------EGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVL  294 (314)
T ss_pred             ---HHHHH---------cCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence               00000         11111112234557889999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=7.1e-35  Score=304.15  Aligned_cols=245  Identities=27%  Similarity=0.389  Sum_probs=196.0

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCccccccee-ccCCceEEEEEec
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYC-DEGQNRLLVYEFM  581 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~-~~~~~~~lV~E~~  581 (792)
                      +.+.+.||+|+||.||++...   +..+++|.++..  ...+.+.+|+.++++++|+|++++++++ .+++..++|+||+
T Consensus         8 ~~~~~~lg~g~~~~v~~~~~~---~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~   82 (256)
T cd05082           8 LKLLQTIGKGEFGDVMLGDYR---GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   82 (256)
T ss_pred             CeeeeeecccCCCeEEEEEEc---CCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence            345678999999999999654   457999988643  3356799999999999999999999976 4556789999999


Q ss_pred             cCCCccccccCCC--CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          582 SNGTVASFLFGDS--KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       582 ~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      ++++|.+++....  .+++..+.+++.||+.||+|||+.   +++||||||+||++++++.+||+|||+++......   
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~---  156 (256)
T cd05082          83 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ---  156 (256)
T ss_pred             CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceeccccC---
Confidence            9999999987543  478999999999999999999998   99999999999999999999999999988643222   


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                       ....++..|+|||.+.+..++.++||||||+++|||++ |+.||......       .....          +......
T Consensus       157 -~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~-------~~~~~----------~~~~~~~  218 (256)
T cd05082         157 -DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-------DVVPR----------VEKGYKM  218 (256)
T ss_pred             -CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHH----------HhcCCCC
Confidence             12234568999999998899999999999999999998 88887543211       00000          0011111


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                      ..+...+..+.+++.+||+.+|++|||+.++++.|+.+
T Consensus       219 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         219 DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI  256 (256)
T ss_pred             CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence            12223456788999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=4.3e-35  Score=322.21  Aligned_cols=251  Identities=19%  Similarity=0.240  Sum_probs=196.5

Q ss_pred             HhhhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEE
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~  578 (792)
                      .+.+.+.||+|+||.||++... .+++.+|+|++.+..   ....+.+.+|+.+++.++||||+++++.+.++...++||
T Consensus        44 ~y~i~~~lG~G~fg~Vy~~~~~-~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~  122 (371)
T cd05622          44 DYEVVKVIGRGAFGEVQLVRHK-STRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVM  122 (371)
T ss_pred             hcEEEEEEeecCCeEEEEEEEC-CCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            3445578999999999999754 456789999986422   223456789999999999999999999999999999999


Q ss_pred             EeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          579 EFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       579 E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      ||+++|+|.+++... .+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++........
T Consensus       123 Ey~~gg~L~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~  198 (371)
T cd05622         123 EYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV  198 (371)
T ss_pred             cCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcc
Confidence            999999999998653 578888899999999999999998   9999999999999999999999999999876543333


Q ss_pred             ccccccccCCcccccccccC----CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhc
Q 003836          659 TNTAIRGTKGYVAPEWFRNM----PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEN  734 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~----~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  734 (792)
                      ......||+.|+|||++...    .++.++|||||||++|||++|+.||........   .             ..++..
T Consensus       199 ~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~---~-------------~~i~~~  262 (371)
T cd05622         199 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT---Y-------------SKIMNH  262 (371)
T ss_pred             cccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHH---H-------------HHHHcC
Confidence            33456799999999998653    378999999999999999999999975432110   0             011110


Q ss_pred             --hhcccCCHHHHHHHHHHHHHccccCCCC--CCCHHhHHHHh
Q 003836          735 --DLEAMNNVTMLHRFVMVAFWCIQEDPSH--RPTMRKVTQML  773 (792)
Q Consensus       735 --~~~~~~~~~~~~~l~~l~~~Cl~~~p~~--RPs~~evl~~L  773 (792)
                        ..........+..+.+++..||+.++.+  ||+++|+++..
T Consensus       263 ~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~  305 (371)
T cd05622         263 KNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL  305 (371)
T ss_pred             CCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence              0111112234567888999999844433  78999988753

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=5.8e-35  Score=297.01  Aligned_cols=260  Identities=23%  Similarity=0.317  Sum_probs=198.1

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccccc--chHHHHHHHHHhcccCCCC-cccccceeccCC------ceE
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKN-LVRLLGYCDEGQ------NRL  575 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~--~~~~~~~Ei~~l~~l~h~n-iv~l~g~~~~~~------~~~  575 (792)
                      ..++||+|+||+||+|... .+++.||+|++.....+  ......+|+.++++++|+| ||+|++++...+      ..+
T Consensus        15 ~~eklGeGtyg~Vykar~~-~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~   93 (323)
T KOG0594|consen   15 KVEKLGEGTYGVVYKARSK-RTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLY   93 (323)
T ss_pred             HHHHhCCCCceEEEEEEEe-cCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEE
Confidence            3467999999999999754 45689999999765432  3456789999999999999 999999998777      788


Q ss_pred             EEEEeccCCCccccccCCC----CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCcc
Q 003836          576 LVYEFMSNGTVASFLFGDS----KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKL  651 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~~----~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~  651 (792)
                      +|+||++. +|..++....    .++...+..++.||++||+|||++   +|+||||||.||||+++|.+||+|||+|+.
T Consensus        94 lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFGlAra  169 (323)
T KOG0594|consen   94 LVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFGLARA  169 (323)
T ss_pred             EEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccchHHH
Confidence            99999976 8999987654    466678999999999999999999   999999999999999999999999999997


Q ss_pred             ccCCCCCccccccccCCcccccccccC-CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHH----Hhhccc
Q 003836          652 LTLDQSHTNTAIRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAY----DRYQER  726 (792)
Q Consensus       652 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~----~~~~~~  726 (792)
                      ..-+.. ..+..++|.-|+|||++.+. .|+...||||+||++.||++++..|....+......+....-    ..|.  
T Consensus       170 ~~ip~~-~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp--  246 (323)
T KOG0594|consen  170 FSIPMR-TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWP--  246 (323)
T ss_pred             hcCCcc-cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCC--
Confidence            653322 24556689999999998775 799999999999999999999888876554222111110000    0000  


Q ss_pred             chhHhhhch-----hcccC--C---HHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          727 TLEALVEND-----LEAMN--N---VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       727 ~~~~~~~~~-----~~~~~--~---~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .+..+.+..     .....  .   ........+++.+||+.+|.+|.|++.++++
T Consensus       247 ~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h  302 (323)
T KOG0594|consen  247 GVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH  302 (323)
T ss_pred             CccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence            001111110     00000  0   0111478899999999999999999999886

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=1.5e-34  Score=303.52  Aligned_cols=255  Identities=21%  Similarity=0.348  Sum_probs=203.9

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccc---cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV---FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +.+.+.||+|++|.||+|... .+++.+|+|.++..   .....+.+.+|++++++++|+|++++++++.+.+..++|||
T Consensus         4 y~~~~~lg~g~~~~v~~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   82 (267)
T cd08224           4 FKIEKKIGKGQFSVVYKAICL-LDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLE   82 (267)
T ss_pred             eeeeeeeccCCceEEEEEEEc-CCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEe
Confidence            345678999999999999765 45678999988632   22235689999999999999999999999999999999999


Q ss_pred             eccCCCccccccC----CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCC
Q 003836          580 FMSNGTVASFLFG----DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD  655 (792)
Q Consensus       580 ~~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~  655 (792)
                      |+++++|.+++..    ...+++..+..++.|+++||.|||+.   +|+|+||+|+||+++.++.++|+|||+++.....
T Consensus        83 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~  159 (267)
T cd08224          83 LADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSSK  159 (267)
T ss_pred             cCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccCC
Confidence            9999999998853    24578999999999999999999998   9999999999999999999999999998865433


Q ss_pred             CCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          656 QSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       656 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                      ... .....+++.|+|||.+.+..++.++|||||||++|||++|+.||........     .. ......        ..
T Consensus       160 ~~~-~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~~-~~~~~~--------~~  224 (267)
T cd08224         160 TTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY-----SL-CKKIEK--------CD  224 (267)
T ss_pred             Ccc-cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHH-----HH-Hhhhhc--------CC
Confidence            221 2234578899999999988999999999999999999999999854321100     00 000000        00


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                      ............+.+++.+||+.+|++||++.+|+++|+.+
T Consensus       225 ~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~  265 (267)
T cd08224         225 YPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM  265 (267)
T ss_pred             CCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence            11111124556788999999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=6.8e-35  Score=314.74  Aligned_cols=248  Identities=26%  Similarity=0.318  Sum_probs=209.3

Q ss_pred             HHhhhhhhcCccccceEEEeeecCCCceEEEEEEccccccc---chHHHHHHHHHhcccC-CCCcccccceeccCCceEE
Q 003836          501 VTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD---SEKEFKAEVNGIGQTH-HKNLVRLLGYCDEGQNRLL  576 (792)
Q Consensus       501 ~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~---~~~~~~~Ei~~l~~l~-h~niv~l~g~~~~~~~~~l  576 (792)
                      ..+.+.++||+|.||.||++... .+++.+|+|.+.+....   ....+.+|+++|+++. |||||.+.+.++.....++
T Consensus        35 ~~Y~l~~~lG~G~Fg~v~~~~~~-~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l  113 (382)
T KOG0032|consen   35 EKYELGRELGRGQFGVVYLCREK-STGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL  113 (382)
T ss_pred             ccEEehhhhCCCCceEEEEEEec-CCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence            34556689999999999999754 55789999999765443   3368999999999998 9999999999999999999


Q ss_pred             EEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC----CCeEEeecCCCccc
Q 003836          577 VYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH----YNARISDFGLAKLL  652 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~----~~~kl~Dfg~a~~~  652 (792)
                      |||++.+|.|.+.+... .+++.....++.||+.++.|||+.   +|+||||||+|+|+...    +.+|++|||++...
T Consensus       114 vmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~  189 (382)
T KOG0032|consen  114 VMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFI  189 (382)
T ss_pred             EEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCCceEc
Confidence            99999999999998766 489999999999999999999998   99999999999999643    57999999999987


Q ss_pred             cCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhh
Q 003836          653 TLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALV  732 (792)
Q Consensus       653 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  732 (792)
                      ..  ......++||+.|+|||++....|+..+||||+||++|.|++|..||..........                .+.
T Consensus       190 ~~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~----------------~i~  251 (382)
T KOG0032|consen  190 KP--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL----------------AIL  251 (382)
T ss_pred             cC--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH----------------HHH
Confidence            65  445566789999999999999999999999999999999999999998765432221                111


Q ss_pred             hc--hhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          733 EN--DLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       733 ~~--~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ..  ......-...+..+.+++..++..||.+|+|+.++++
T Consensus       252 ~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~  292 (382)
T KOG0032|consen  252 RGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ  292 (382)
T ss_pred             cCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence            11  1222222345778889999999999999999999999

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=7.8e-35  Score=303.76  Aligned_cols=248  Identities=25%  Similarity=0.439  Sum_probs=198.9

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      .+.+.||+|+||.||++....  +..+|+|++... .....++.+|++++++++|||++++++++......++||||+++
T Consensus         7 ~~~~~ig~g~~g~v~~~~~~~--~~~~~~k~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~   83 (256)
T cd05112           7 TLVQEIGSGQFGLVWLGYWLE--KRKVAIKTIREG-AMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEH   83 (256)
T ss_pred             EEEeeecCcccceEEEEEEeC--CCeEEEEECCCC-CCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCC
Confidence            456789999999999997643  457999998753 23456799999999999999999999999999999999999999


Q ss_pred             CCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          584 GTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       584 gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      ++|.+++... ..+++..+..++.|++.||+|||+.   +++|+||||+||+++.++.+||+|||+++............
T Consensus        84 ~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~  160 (256)
T cd05112          84 GCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTG  160 (256)
T ss_pred             CcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCcccccCC
Confidence            9999998764 4678999999999999999999998   99999999999999999999999999998654332222222


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCC
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN  741 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  741 (792)
                      ..++.+|+|||.+.+..++.++||||||+++|||++ |+.||........   .     ....         .......+
T Consensus       161 ~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~---~-----~~~~---------~~~~~~~~  223 (256)
T cd05112         161 TKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEV---V-----ETIN---------AGFRLYKP  223 (256)
T ss_pred             CccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHH---H-----HHHh---------CCCCCCCC
Confidence            335678999999998899999999999999999998 8888865432110   0     0000         00011111


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHhHHHHhc
Q 003836          742 VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE  774 (792)
Q Consensus       742 ~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~  774 (792)
                      ...+..+.+++.+||+.+|++||++.|++++|.
T Consensus       224 ~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~  256 (256)
T cd05112         224 RLASQSVYELMQHCWKERPEDRPSFSLLLHQLA  256 (256)
T ss_pred             CCCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence            123467899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=1.4e-34  Score=305.65  Aligned_cols=247  Identities=26%  Similarity=0.375  Sum_probs=199.8

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +...+.||+|+||.||+|... .+++.||+|.+.... ....+.+.+|++++++++|+||+++++++...+..++||||+
T Consensus         6 y~~~~~l~~g~~~~vy~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06642           6 FTKLERIGKGSFGEVYKGIDN-RTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             HHHHHHhcCCCCeeEEEEEEc-CCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence            444578999999999999754 456789999987433 334567899999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      ++++|.+++.. ..+++..+..++.|+++||.|||+.   +++|+||+|+||++++++.+||+|||++........ ...
T Consensus        85 ~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-~~~  159 (277)
T cd06642          85 GGGSALDLLKP-GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI-KRN  159 (277)
T ss_pred             CCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcch-hhh
Confidence            99999998854 4678999999999999999999998   999999999999999999999999999986543221 122


Q ss_pred             cccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCC
Q 003836          662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN  741 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  741 (792)
                      ...++..|+|||.+.+..++.++||||||++++||++|+.|+..........                 .+.........
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~-----------------~~~~~~~~~~~  222 (277)
T cd06642         160 TFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLF-----------------LIPKNSPPTLE  222 (277)
T ss_pred             cccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHh-----------------hhhcCCCCCCC
Confidence            3457889999999999899999999999999999999999986432111000                 00011111112


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          742 VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       742 ~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ...+..+.+++.+||+.+|++||++.+++++
T Consensus       223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06642         223 GQYSKPFKEFVEACLNKDPRFRPTAKELLKH  253 (277)
T ss_pred             cccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            2345678899999999999999999999984

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=8e-35  Score=316.23  Aligned_cols=261  Identities=26%  Similarity=0.353  Sum_probs=203.8

Q ss_pred             HHHHHhhhhhhcCccccceEEEeeecC------CCceEEEEEEccccc-ccchHHHHHHHHHhccc-CCCCcccccceec
Q 003836          498 LVEVTRGFKEELGRGAFGTVYKGFVNM------GSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCD  569 (792)
Q Consensus       498 l~~~~~~~~~~lG~G~~g~Vy~g~~~~------~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~  569 (792)
                      +....+.+.+.||+|+||.||++....      .....+|+|.++... ....+++.+|++++.++ +|+||++++++|.
T Consensus         9 ~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~   88 (334)
T cd05100           9 LSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACT   88 (334)
T ss_pred             cCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEc
Confidence            334456677899999999999996421      122468999887533 23456899999999999 7999999999999


Q ss_pred             cCCceEEEEEeccCCCccccccCC----------------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcE
Q 003836          570 EGQNRLLVYEFMSNGTVASFLFGD----------------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNI  633 (792)
Q Consensus       570 ~~~~~~lV~E~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NI  633 (792)
                      +.+..++++||+++|+|.+++...                ..+.+..+..++.||+.||+|||+.   +|+||||||+||
T Consensus        89 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Ni  165 (334)
T cd05100          89 QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNV  165 (334)
T ss_pred             cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceE
Confidence            999999999999999999998642                2467888999999999999999998   999999999999


Q ss_pred             EEcCCCCeEEeecCCCccccCCCCC-ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhh
Q 003836          634 LLDDHYNARISDFGLAKLLTLDQSH-TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVD  711 (792)
Q Consensus       634 Ll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~  711 (792)
                      |+++++.+||+|||+++........ ......++..|+|||.+.+..++.++||||||+++|||++ |..||........
T Consensus       166 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~  245 (334)
T cd05100         166 LVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEEL  245 (334)
T ss_pred             EEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHH
Confidence            9999999999999999865432211 1122234567999999999999999999999999999998 7788754321110


Q ss_pred             hhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          712 KAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       712 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                      .        .         .+........+...+..+.+++.+||+.+|++||++.|+++.|+++..
T Consensus       246 ~--------~---------~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~  295 (334)
T cd05100         246 F--------K---------LLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT  295 (334)
T ss_pred             H--------H---------HHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence            0        0         000111111222345678899999999999999999999999988763

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=8.1e-35  Score=304.04  Aligned_cols=239  Identities=26%  Similarity=0.439  Sum_probs=190.5

Q ss_pred             hhcCccccceEEEeeecCCC---------ceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEE
Q 003836          507 EELGRGAFGTVYKGFVNMGS---------SNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLV  577 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~---------~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV  577 (792)
                      +.||+|+||.||+|......         ...+++|.+...... ...+.+|+.++++++|+||+++++++.. ...++|
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv   78 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV   78 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence            46999999999999875432         135788877654333 6789999999999999999999999988 778999


Q ss_pred             EEeccCCCccccccCCC-CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCC-------CeEEeecCCC
Q 003836          578 YEFMSNGTVASFLFGDS-KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY-------NARISDFGLA  649 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~~-~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~-------~~kl~Dfg~a  649 (792)
                      |||+++|+|.+++.... .+++..+..++.||+.||+|||+.   +|+|+||||+|||++.++       .+||+|||++
T Consensus        79 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a  155 (259)
T cd05037          79 EEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP  155 (259)
T ss_pred             EEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence            99999999999998765 789999999999999999999998   999999999999999887       7999999999


Q ss_pred             ccccCCCCCccccccccCCcccccccccC--CCCcccceehHHHHHHHHHhc-CcCCCcchhhhhhhhHHHHHHHhhccc
Q 003836          650 KLLTLDQSHTNTAIRGTKGYVAPEWFRNM--PITVKVDVYSYGVLLLEIICL-RRNIDNEISKVDKAILTDWAYDRYQER  726 (792)
Q Consensus       650 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~k~DV~S~Gv~l~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~  726 (792)
                      +....     .....++..|+|||.+...  .++.++||||||+++|||++| ..|+...........        +.  
T Consensus       156 ~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~--------~~--  220 (259)
T cd05037         156 ITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERF--------YQ--  220 (259)
T ss_pred             ccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHH--------Hh--
Confidence            86543     1223466789999999876  789999999999999999995 666644321110000        00  


Q ss_pred             chhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhc
Q 003836          727 TLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE  774 (792)
Q Consensus       727 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~  774 (792)
                            ....   .+......+.+++.+||+.+|.+||++.+|++.|+
T Consensus       221 ------~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         221 ------DQHR---LPMPDCAELANLINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             ------cCCC---CCCCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence                  0000   01111267889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=7e-35  Score=316.28  Aligned_cols=249  Identities=19%  Similarity=0.226  Sum_probs=194.3

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      .+.++||+|+||.||++... ..++.+|+|++.+..   ......+.+|+.++..++|+||+++++++.+.+..++||||
T Consensus         4 ~~~~~lG~G~fg~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey   82 (332)
T cd05623           4 EILKVIGRGAFGEVAVVKLK-NADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDY   82 (332)
T ss_pred             eEEEEEEeCCCeEEEEEEEC-CCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEec
Confidence            34578999999999999765 456789999986421   22334588899999999999999999999999999999999


Q ss_pred             ccCCCccccccC-CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          581 MSNGTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       581 ~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      +++|+|.+++.+ ...+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++.........
T Consensus        83 ~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~  159 (332)
T cd05623          83 YVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ  159 (332)
T ss_pred             cCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheecccCCcce
Confidence            999999999976 35788999999999999999999998   99999999999999999999999999997654333333


Q ss_pred             cccccccCCcccccccc-----cCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhc
Q 003836          660 NTAIRGTKGYVAPEWFR-----NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEN  734 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~-----~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  734 (792)
                      .....||+.|+|||++.     ...++.++|||||||++|||++|+.||..........                .+...
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~----------------~i~~~  223 (332)
T cd05623         160 SSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG----------------KIMNH  223 (332)
T ss_pred             ecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHH----------------HHhCC
Confidence            33456999999999986     3468899999999999999999999997543211100                00000


Q ss_pred             hhc---ccCCHHHHHHHHHHHHHccccCC--CCCCCHHhHHHH
Q 003836          735 DLE---AMNNVTMLHRFVMVAFWCIQEDP--SHRPTMRKVTQM  772 (792)
Q Consensus       735 ~~~---~~~~~~~~~~l~~l~~~Cl~~~p--~~RPs~~evl~~  772 (792)
                      ...   .......+.++.+++.+|+..++  ..||+++|+++.
T Consensus       224 ~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h  266 (332)
T cd05623         224 KERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH  266 (332)
T ss_pred             CccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence            000   00112235667788888875544  347899999876

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=9e-35  Score=305.65  Aligned_cols=248  Identities=28%  Similarity=0.412  Sum_probs=196.7

Q ss_pred             hcCccccceEEEeeecC-----CCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          508 ELGRGAFGTVYKGFVNM-----GSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       508 ~lG~G~~g~Vy~g~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .||+|+||.||+|+...     ..++.+++|.+.... ......+.+|+.++++++||||+++++++...+..++||||+
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM   81 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence            58999999999997642     123579999886543 234568899999999999999999999999999999999999


Q ss_pred             cCCCccccccCC-------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCC-----CeEEeecCCC
Q 003836          582 SNGTVASFLFGD-------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY-----NARISDFGLA  649 (792)
Q Consensus       582 ~~gsL~~~l~~~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~-----~~kl~Dfg~a  649 (792)
                      ++++|.+++...       ..+++..++.++.|++.||+|||+.   +++|+||||+||+++.+.     .+||+|||++
T Consensus        82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~  158 (269)
T cd05044          82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA  158 (269)
T ss_pred             CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence            999999999642       3467899999999999999999998   999999999999999877     8999999999


Q ss_pred             ccccCCCCC-ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccc
Q 003836          650 KLLTLDQSH-TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERT  727 (792)
Q Consensus       650 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  727 (792)
                      +........ ......++..|+|||.+.+..++.++||||||+++|||++ |+.||........   . .          
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~---~-~----------  224 (269)
T cd05044         159 RDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEV---L-Q----------  224 (269)
T ss_pred             cccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHH---H-H----------
Confidence            765432221 1112335678999999999999999999999999999998 8988864322100   0 0          


Q ss_pred             hhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhcc
Q 003836          728 LEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEG  775 (792)
Q Consensus       728 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~  775 (792)
                         .+........+...+..+.+++.+||+.+|.+||++++|++.|++
T Consensus       225 ---~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  269 (269)
T cd05044         225 ---HVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN  269 (269)
T ss_pred             ---HHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence               001111111223345678899999999999999999999999864

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=2.9e-35  Score=323.07  Aligned_cols=249  Identities=21%  Similarity=0.282  Sum_probs=194.5

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +.+.||+|+||.||++... .+++.+|+|++....   ......+.+|+.++.+++|+||+++++.+.+.+..++||||+
T Consensus         5 ~~~~lG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~   83 (360)
T cd05627           5 SLKVIGRGAFGEVRLVQKK-DTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFL   83 (360)
T ss_pred             EEEEEeeCCCEEEEEEEEC-CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCC
Confidence            3468999999999999754 456789999987532   233467888999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC----
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS----  657 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~----  657 (792)
                      ++|+|.+++.....+++..+..++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||+++.+.....    
T Consensus        84 ~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~  160 (360)
T cd05627          84 PGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFY  160 (360)
T ss_pred             CCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccc
Confidence            9999999998888899999999999999999999998   999999999999999999999999999875432110    


Q ss_pred             ------------------------------CccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcch
Q 003836          658 ------------------------------HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEI  707 (792)
Q Consensus       658 ------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~  707 (792)
                                                    .......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~  240 (360)
T cd05627         161 RNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET  240 (360)
T ss_pred             cccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCC
Confidence                                          00113469999999999999999999999999999999999999997543


Q ss_pred             hhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCC---HHhHHHH
Q 003836          708 SKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPT---MRKVTQM  772 (792)
Q Consensus       708 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs---~~evl~~  772 (792)
                      .......+..     +         ...+........+.++.+++.+++. +|.+|++   ++|+++.
T Consensus       241 ~~~~~~~i~~-----~---------~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h  293 (360)
T cd05627         241 PQETYRKVMN-----W---------KETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSH  293 (360)
T ss_pred             HHHHHHHHHc-----C---------CCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcC
Confidence            3211100000     0         0000000011134566777777664 9999985   5666654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=1.6e-34  Score=303.87  Aligned_cols=252  Identities=27%  Similarity=0.380  Sum_probs=199.4

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccc----------cccchHHHHHHHHHhcc-cCCCCcccccceeccCC
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV----------FQDSEKEFKAEVNGIGQ-THHKNLVRLLGYCDEGQ  572 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~----------~~~~~~~~~~Ei~~l~~-l~h~niv~l~g~~~~~~  572 (792)
                      .+.+.||+|+||.||+|......++.+|+|.+...          ......++.+|+.++.+ ++|+||+++++++.+++
T Consensus         3 ~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~   82 (269)
T cd08528           3 AVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEND   82 (269)
T ss_pred             hhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCC
Confidence            34578999999999999876546678999987532          12233557788888865 79999999999999999


Q ss_pred             ceEEEEEeccCCCccccccC----CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCC
Q 003836          573 NRLLVYEFMSNGTVASFLFG----DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGL  648 (792)
Q Consensus       573 ~~~lV~E~~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~  648 (792)
                      ..++||||+++++|.+++..    ...+++..+.+++.|++.||.|||+.  .+++|+||+|+||+++.++.+||+|||+
T Consensus        83 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~--~~i~H~dl~~~nil~~~~~~~~l~dfg~  160 (269)
T cd08528          83 RLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKE--KRIVHRDLTPNNIMLGEDDKVTITDFGL  160 (269)
T ss_pred             eEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccC--CceeecCCCHHHEEECCCCcEEEecccc
Confidence            99999999999999988743    34678899999999999999999963  2899999999999999999999999999


Q ss_pred             CccccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccch
Q 003836          649 AKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTL  728 (792)
Q Consensus       649 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  728 (792)
                      +.......  ......++..|+|||.+.+..++.++||||||+++|||++|+.||.........                
T Consensus       161 ~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~----------------  222 (269)
T cd08528         161 AKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLA----------------  222 (269)
T ss_pred             eeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHH----------------
Confidence            98754433  233456889999999999888999999999999999999999998643221110                


Q ss_pred             hHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhcc
Q 003836          729 EALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEG  775 (792)
Q Consensus       729 ~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~  775 (792)
                      ..+................+.+++.+||+.||++||++.|+.++++.
T Consensus       223 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~  269 (269)
T cd08528         223 TKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD  269 (269)
T ss_pred             HHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence            00111111111111234678899999999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=7.8e-35  Score=310.71  Aligned_cols=248  Identities=24%  Similarity=0.322  Sum_probs=200.9

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      .+.+.||+|++|.||+|.. ..+++.+++|.+........+.+.+|+.+++.++|+||+++++.+..+...++||||+++
T Consensus        23 ~~~~~lg~g~~~~v~~~~~-~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~  101 (296)
T cd06654          23 TRFEKIGQGASGTVYTAMD-VATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG  101 (296)
T ss_pred             eeEEEecCCCCeEEEEEEE-CCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCC
Confidence            3456799999999999964 345678999998766555567899999999999999999999999999999999999999


Q ss_pred             CCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccccc
Q 003836          584 GTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAI  663 (792)
Q Consensus       584 gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  663 (792)
                      ++|.+++.. ..+++.++..++.|++.||+|||+.   +|+|+||||+|||++.++.+||+|||++........ .....
T Consensus       102 ~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~  176 (296)
T cd06654         102 GSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-KRSTM  176 (296)
T ss_pred             CCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhcccccc-ccCcc
Confidence            999999854 4578899999999999999999998   999999999999999999999999999886543221 12234


Q ss_pred             cccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHH
Q 003836          664 RGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVT  743 (792)
Q Consensus       664 ~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  743 (792)
                      .+++.|+|||.+.+..++.++|||||||++|||++|+.||.........  .     ....        ........+..
T Consensus       177 ~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~--~-----~~~~--------~~~~~~~~~~~  241 (296)
T cd06654         177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL--Y-----LIAT--------NGTPELQNPEK  241 (296)
T ss_pred             cCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhH--H-----HHhc--------CCCCCCCCccc
Confidence            5888999999999888999999999999999999999999654321100  0     0000        00001111233


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          744 MLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       744 ~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ....+.+++.+||+.+|++||++.++++.
T Consensus       242 ~~~~l~~li~~~l~~~p~~Rpt~~eil~~  270 (296)
T cd06654         242 LSAIFRDFLNRCLDMDVEKRGSAKELLQH  270 (296)
T ss_pred             cCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence            45678899999999999999999999973

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=1.3e-34  Score=304.22  Aligned_cols=252  Identities=21%  Similarity=0.298  Sum_probs=200.8

Q ss_pred             HhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .+.+.+.||+|+||.||++... .+++.+|+|.++.........+.+|+.+++.++||||+++++.+...+..++|+||+
T Consensus        10 ~~~~~~~lg~g~~~~v~~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~   88 (267)
T cd06645          10 DFELIQRIGSGTYGDVYKARNV-NTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC   88 (267)
T ss_pred             HHHHHHHhCCCCCeEEEEEEEc-CCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence            4556688999999999999654 456789999987654445567889999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      ++++|.+++.....+++.++..++.|++.||.|||+.   +++|+||||+||+++.++.+||+|||++....... ....
T Consensus        89 ~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~-~~~~  164 (267)
T cd06645          89 GGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITATI-AKRK  164 (267)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCcc-cccc
Confidence            9999999998878899999999999999999999998   99999999999999999999999999987654321 2223


Q ss_pred             cccccCCcccccccc---cCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          662 AIRGTKGYVAPEWFR---NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~---~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      ...|+..|+|||.+.   ...++.++|||||||++|||++|+.|+..........   ........        .+....
T Consensus       165 ~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~---~~~~~~~~--------~~~~~~  233 (267)
T cd06645         165 SFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF---LMTKSNFQ--------PPKLKD  233 (267)
T ss_pred             cccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHH---hhhccCCC--------CCcccc
Confidence            346899999999874   4568899999999999999999999985432211100   00000000        000000


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                        ....+..+.+++.+||+.+|++||++++|++
T Consensus       234 --~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~  264 (267)
T cd06645         234 --KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ  264 (267)
T ss_pred             --cCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence              1123456789999999999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=2.4e-34  Score=304.72  Aligned_cols=250  Identities=24%  Similarity=0.322  Sum_probs=199.5

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.++||+|+||.||+|... .++..+++|.+........+.+.+|+++++.++|+||+++++++...+..++|+||++
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~   85 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNK-ETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA   85 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEEC-CCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecC
Confidence            345578999999999999754 4567889999876555556789999999999999999999999999999999999999


Q ss_pred             CCCccccccC-CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          583 NGTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       583 ~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      +++|..++.+ ...+++..+..++.|+++||.|||+.   +++|+||||+|||++.++.+||+|||+++...... ....
T Consensus        86 ~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~-~~~~  161 (282)
T cd06643          86 GGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI-QRRD  161 (282)
T ss_pred             CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccccccc-cccc
Confidence            9999998865 35689999999999999999999998   99999999999999999999999999987653222 1223


Q ss_pred             cccccCCcccccccc-----cCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          662 AIRGTKGYVAPEWFR-----NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~-----~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                      ...++..|+|||.+.     +..++.++|||||||++|||++|+.||........   .....    ...        ..
T Consensus       162 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~---~~~~~----~~~--------~~  226 (282)
T cd06643         162 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRV---LLKIA----KSE--------PP  226 (282)
T ss_pred             cccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHH---HHHHh----hcC--------CC
Confidence            345889999999984     34578899999999999999999999865432111   00000    000        00


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ....+...+..+.+++.+||+.+|.+||++.++++.
T Consensus       227 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  262 (282)
T cd06643         227 TLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH  262 (282)
T ss_pred             CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            001122345678899999999999999999999874

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=1.1e-34  Score=304.57  Aligned_cols=247  Identities=25%  Similarity=0.350  Sum_probs=200.4

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccccc---------chHHHHHHHHHhcccCCCCcccccceeccCCce
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD---------SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNR  574 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~---------~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~  574 (792)
                      .+.+.||+|++|.||+|... ..++.+|+|.+......         ..+.+.+|+.++++++|+||+++++++.+....
T Consensus         3 ~~~~~ig~g~~~~v~~a~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (267)
T cd06628           3 IKGALIGSGSFGSVYLGMNA-SSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL   81 (267)
T ss_pred             cccceeecCCCeEEEEEEec-CCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence            34568999999999999754 44678999988654322         125688999999999999999999999999999


Q ss_pred             EEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccC
Q 003836          575 LLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL  654 (792)
Q Consensus       575 ~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~  654 (792)
                      ++|+||+++++|.+++.....+++..+..++.|++.||+|||+.   +++|+||+|+||++++++.+||+|||.++....
T Consensus        82 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~  158 (267)
T cd06628          82 NIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISKKLEA  158 (267)
T ss_pred             EEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCCccccc
Confidence            99999999999999998777889999999999999999999998   999999999999999999999999999987653


Q ss_pred             CCCC-----ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchh
Q 003836          655 DQSH-----TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLE  729 (792)
Q Consensus       655 ~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  729 (792)
                      ....     ......++..|+|||.+.+..++.++||||||+++|||++|+.||.........                .
T Consensus       159 ~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~----------------~  222 (267)
T cd06628         159 NSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAI----------------F  222 (267)
T ss_pred             ccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHH----------------H
Confidence            2211     112245788999999999889999999999999999999999999754221100                0


Q ss_pred             HhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          730 ALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       730 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .... ......+......+.+++.+||+.+|.+||++.||++
T Consensus       223 ~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         223 KIGE-NASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             HHhc-cCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence            0000 1111223345577889999999999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1e-34  Score=314.73  Aligned_cols=252  Identities=19%  Similarity=0.219  Sum_probs=193.5

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccc---cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV---FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      .+.+.||+|+||.||++... .+++.+|+|++.+.   .....+.+.+|+.++..++|+||+++++++.+++..++||||
T Consensus         4 ~~~~~lG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   82 (331)
T cd05597           4 EILKVIGRGAFGEVAVVKMK-NTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDY   82 (331)
T ss_pred             eEEEEEEecCCeEEEEEEEC-CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEec
Confidence            35578999999999999764 45678999998642   223345688999999999999999999999999999999999


Q ss_pred             ccCCCccccccC-CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          581 MSNGTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       581 ~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      +++|+|.+++.. ...+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||++..........
T Consensus        83 ~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~  159 (331)
T cd05597          83 YVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQ  159 (331)
T ss_pred             CCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCcc
Confidence            999999999975 45788999999999999999999998   99999999999999999999999999997654433333


Q ss_pred             cccccccCCccccccccc-----CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhc
Q 003836          660 NTAIRGTKGYVAPEWFRN-----MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEN  734 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~-----~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  734 (792)
                      .....||+.|+|||++..     ..++.++|||||||++|||++|+.||..........       ..........    
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~-------~i~~~~~~~~----  228 (331)
T cd05597         160 SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG-------KIMNHKEHFQ----  228 (331)
T ss_pred             ccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHH-------HHHcCCCccc----
Confidence            333568999999999863     457889999999999999999999996542211100       0000000000    


Q ss_pred             hhcccCCHHHHHHHHHHHHHcccc--CCCCCCCHHhHHHH
Q 003836          735 DLEAMNNVTMLHRFVMVAFWCIQE--DPSHRPTMRKVTQM  772 (792)
Q Consensus       735 ~~~~~~~~~~~~~l~~l~~~Cl~~--~p~~RPs~~evl~~  772 (792)
                       .. ......+..+.+++.+|+..  ++..||+++++++.
T Consensus       229 -~~-~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h  266 (331)
T cd05597         229 -FP-PDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH  266 (331)
T ss_pred             -CC-CccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence             00 00112345667778777754  33347899998876

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=5.9e-35  Score=316.62  Aligned_cols=249  Identities=18%  Similarity=0.227  Sum_probs=194.8

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      .+.+.||+|+||.||+++.. .+++.+|+|++.+..   ......+.+|+.++..++|+||+++++++.+.+..++||||
T Consensus         4 ~i~~~lG~G~fg~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey   82 (331)
T cd05624           4 EIIKVIGRGAFGEVAVVKMK-HTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDY   82 (331)
T ss_pred             eEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeC
Confidence            34578999999999999754 456789999986521   22345588899999999999999999999999999999999


Q ss_pred             ccCCCccccccC-CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          581 MSNGTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       581 ~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      +++|+|.+++.. ...+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.........
T Consensus        83 ~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~  159 (331)
T cd05624          83 YVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQ  159 (331)
T ss_pred             CCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccCCCcee
Confidence            999999999976 45788999999999999999999998   99999999999999999999999999998765443333


Q ss_pred             cccccccCCccccccccc-----CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhc
Q 003836          660 NTAIRGTKGYVAPEWFRN-----MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEN  734 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~-----~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  734 (792)
                      .....||+.|+|||.+.+     ..++.++|||||||++|||++|+.||.........                ..+...
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~----------------~~i~~~  223 (331)
T cd05624         160 SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETY----------------GKIMNH  223 (331)
T ss_pred             eccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHH----------------HHHHcC
Confidence            334569999999999865     46889999999999999999999999654321110                000000


Q ss_pred             hhc---ccCCHHHHHHHHHHHHHccccCCCC--CCCHHhHHHH
Q 003836          735 DLE---AMNNVTMLHRFVMVAFWCIQEDPSH--RPTMRKVTQM  772 (792)
Q Consensus       735 ~~~---~~~~~~~~~~l~~l~~~Cl~~~p~~--RPs~~evl~~  772 (792)
                      ...   .......+.++.+++.+|+..++.+  |++++++++.
T Consensus       224 ~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h  266 (331)
T cd05624         224 EERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH  266 (331)
T ss_pred             CCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence            000   0001123567788888888865544  4688888764

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=3.5e-35  Score=329.53  Aligned_cols=259  Identities=22%  Similarity=0.280  Sum_probs=188.4

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccC--------Cce
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEG--------QNR  574 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~--------~~~  574 (792)
                      +.+.+.||+|+||.||+|... .+++.||||++...    .....+|+.++++++|+||+++++++...        ...
T Consensus        68 y~~~~~LG~G~fg~Vy~~~~~-~~~~~vAiK~i~~~----~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l  142 (440)
T PTZ00036         68 YKLGNIIGNGSFGVVYEAICI-DTSEKVAIKKVLQD----PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFL  142 (440)
T ss_pred             EEEeEEEEeCCCEEEEEEEEC-CCCCEEEEEEEecC----cchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEE
Confidence            345678999999999999754 45678999988542    23346799999999999999999876321        236


Q ss_pred             EEEEEeccCCCcccccc----CCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCC-CeEEeecCCC
Q 003836          575 LLVYEFMSNGTVASFLF----GDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY-NARISDFGLA  649 (792)
Q Consensus       575 ~lV~E~~~~gsL~~~l~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~-~~kl~Dfg~a  649 (792)
                      ++||||+++ +|.+++.    ....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++ .+||+|||++
T Consensus       143 ~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DFGla  218 (440)
T PTZ00036        143 NVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDFGSA  218 (440)
T ss_pred             EEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeeccccc
Confidence            689999985 6666553    345788999999999999999999998   999999999999999664 7999999999


Q ss_pred             ccccCCCCCccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHH----HH---
Q 003836          650 KLLTLDQSHTNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWA----YD---  721 (792)
Q Consensus       650 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~----~~---  721 (792)
                      +......  ......||+.|+|||++.+ ..++.++|||||||++|||++|..||................    ..   
T Consensus       219 ~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~  296 (440)
T PTZ00036        219 KNLLAGQ--RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLK  296 (440)
T ss_pred             hhccCCC--CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence            8764322  2223468999999999865 468999999999999999999999997643321111100000    00   


Q ss_pred             ----hhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          722 ----RYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       722 ----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                          .+.+.....+....+....+...+.++.+|+.+||+.+|.+|||+.|+++.
T Consensus       297 ~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h  351 (440)
T PTZ00036        297 EMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD  351 (440)
T ss_pred             HhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence                000000000001111111222345678999999999999999999999864

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=1.6e-34  Score=304.35  Aligned_cols=247  Identities=25%  Similarity=0.378  Sum_probs=195.0

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhccc-CCCCcccccceeccC------CceE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEG------QNRL  575 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~------~~~~  575 (792)
                      +.+.+.||+|+||.||+|... ..++.+|+|++... .....++.+|+.++.++ +|+||+++++++...      ...+
T Consensus         8 y~~~~~lg~g~~g~vy~~~~~-~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~   85 (272)
T cd06637           8 FELVELVGNGTYGQVYKGRHV-KTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW   85 (272)
T ss_pred             hhHHHheeecCCeEEEEEEEc-CCCcEEEEEEEEcC-CccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEE
Confidence            345578999999999999764 45678999998654 34456789999999998 799999999998653      4578


Q ss_pred             EEEEeccCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCcccc
Q 003836          576 LVYEFMSNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT  653 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~  653 (792)
                      +||||+++++|.+++...  ..+++..+..++.|++.||+|||+.   +|+|+||||+||++++++.+||+|||+++...
T Consensus        86 iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~  162 (272)
T cd06637          86 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD  162 (272)
T ss_pred             EEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCCCceecc
Confidence            999999999999998763  4678999999999999999999998   99999999999999999999999999998654


Q ss_pred             CCCCCccccccccCCcccccccc-----cCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccch
Q 003836          654 LDQSHTNTAIRGTKGYVAPEWFR-----NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTL  728 (792)
Q Consensus       654 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  728 (792)
                      .... ......|++.|+|||++.     ...++.++|||||||++|||++|+.||............       ..    
T Consensus       163 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~-------~~----  230 (272)
T cd06637         163 RTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI-------PR----  230 (272)
T ss_pred             cccc-cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHH-------hc----
Confidence            3222 223456899999999986     346888999999999999999999999643221111000       00    


Q ss_pred             hHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          729 EALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       729 ~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                           ...........+..+.+++.+||+.+|.+|||+.|+++
T Consensus       231 -----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         231 -----NPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             -----CCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence                 00011111223457889999999999999999999987

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=1.5e-34  Score=304.17  Aligned_cols=251  Identities=27%  Similarity=0.407  Sum_probs=188.3

Q ss_pred             hcCccccceEEEeeecCC-CceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCCC
Q 003836          508 ELGRGAFGTVYKGFVNMG-SSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGT  585 (792)
Q Consensus       508 ~lG~G~~g~Vy~g~~~~~-~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~gs  585 (792)
                      +||+|+||.||+|....+ ....+++|.+.... ......+.+|+.+++.++|+||+++++.+.+....++||||+++|+
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD   81 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence            699999999999975433 34578899876543 2334678899999999999999999999999999999999999999


Q ss_pred             ccccccCCC-----CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC-c
Q 003836          586 VASFLFGDS-----KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH-T  659 (792)
Q Consensus       586 L~~~l~~~~-----~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~-~  659 (792)
                      |.+++....     ...+.....++.||+.||+|||+.   +|+||||||+|||+++++.+||+|||+++........ .
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~  158 (269)
T cd05042          82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT  158 (269)
T ss_pred             HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence            999996542     245778889999999999999998   9999999999999999999999999998754322211 1


Q ss_pred             cccccccCCccccccccc-------CCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHh
Q 003836          660 NTAIRGTKGYVAPEWFRN-------MPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEAL  731 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~-------~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  731 (792)
                      .....+++.|+|||++..       ..++.++|||||||++|||++ |+.||.......   .+..    ..... ...+
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~---~~~~----~~~~~-~~~~  230 (269)
T cd05042         159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ---VLKQ----VVREQ-DIKL  230 (269)
T ss_pred             cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH---HHHH----Hhhcc-CccC
Confidence            122345678999998743       457889999999999999999 677775432211   0100    00000 0001


Q ss_pred             hhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhc
Q 003836          732 VENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE  774 (792)
Q Consensus       732 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~  774 (792)
                      ..+    ..+......+.+++..|+ .+|++||++++|+++|.
T Consensus       231 ~~~----~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         231 PKP----QLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             CCC----cccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence            111    112234456677888888 59999999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=1.7e-34  Score=301.13  Aligned_cols=249  Identities=29%  Similarity=0.444  Sum_probs=201.3

Q ss_pred             hhhhcCccccceEEEeeecCCC---ceEEEEEEccccccc-chHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          505 FKEELGRGAFGTVYKGFVNMGS---SNHVAVKKLNSVFQD-SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~---~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      +.+.||+|+||.||++......   ...+|+|++...... ..+.+.+|++.+.+++|+||+++++++.+.+..+++|||
T Consensus         3 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~   82 (258)
T smart00219        3 LGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEY   82 (258)
T ss_pred             ccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEec
Confidence            4578999999999999875432   478999999765433 567899999999999999999999999999999999999


Q ss_pred             ccCCCccccccCCCC--CchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          581 MSNGTVASFLFGDSK--PNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       581 ~~~gsL~~~l~~~~~--l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      +++++|.+++.....  +++..+..++.|++.||+|||+.   +++|+||||+||++++++.++|+|||+++........
T Consensus        83 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~  159 (258)
T smart00219       83 MEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYY  159 (258)
T ss_pred             cCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceeccccccc
Confidence            999999999976543  89999999999999999999998   9999999999999999999999999999876544222


Q ss_pred             ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhc
Q 003836          659 TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLE  737 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  737 (792)
                      ......+++.|+|||.+.+..++.++||||||++++||++ |+.||........       . ..         +.....
T Consensus       160 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~-------~-~~---------~~~~~~  222 (258)
T smart00219      160 KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEV-------L-EY---------LKKGYR  222 (258)
T ss_pred             ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHH-------H-HH---------HhcCCC
Confidence            2222336789999999988889999999999999999998 6777754221100       0 00         000011


Q ss_pred             ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHh
Q 003836          738 AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQML  773 (792)
Q Consensus       738 ~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L  773 (792)
                      ...+...+.++.+++.+|++.+|++|||+.|+++.|
T Consensus       223 ~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      223 LPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             CCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence            111223566788999999999999999999999865

Phosphotransferases. Tyrosine-specific kinase subfamily.

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.9e-35  Score=299.42  Aligned_cols=258  Identities=24%  Similarity=0.354  Sum_probs=199.2

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcc--cCCCCcccccceeccCC----ceEEEE
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQ--THHKNLVRLLGYCDEGQ----NRLLVY  578 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~--l~h~niv~l~g~~~~~~----~~~lV~  578 (792)
                      +.+.||+|.||.||+|.++   ++.||||++...   .+..+.+|.++++.  |+|+||+.+++.-..+.    .++||.
T Consensus       215 L~e~IGkGRyGEVwrG~wr---Ge~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvT  288 (513)
T KOG2052|consen  215 LQEIIGKGRFGEVWRGRWR---GEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVT  288 (513)
T ss_pred             EEEEecCccccceeecccc---CCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEee
Confidence            4567999999999999987   567999999753   45677888888886  59999999999876554    578999


Q ss_pred             EeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhcc-----CCCeEecCCCCCcEEEcCCCCeEEeecCCCcccc
Q 003836          579 EFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEEC-----CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT  653 (792)
Q Consensus       579 E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~  653 (792)
                      +|.+.|||.+||.+ ..++....++++..+|.||++||.+.     .+.|.|||||+.|||+..++.+.|+|+|+|....
T Consensus       289 dYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~  367 (513)
T KOG2052|consen  289 DYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD  367 (513)
T ss_pred             ecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEec
Confidence            99999999999977 67889999999999999999999763     5789999999999999999999999999998766


Q ss_pred             CCCCC---ccccccccCCcccccccccCC----CC--cccceehHHHHHHHHHhc----------CcCCCcchhhhhhhh
Q 003836          654 LDQSH---TNTAIRGTKGYVAPEWFRNMP----IT--VKVDVYSYGVLLLEIICL----------RRNIDNEISKVDKAI  714 (792)
Q Consensus       654 ~~~~~---~~~~~~gt~~y~aPE~~~~~~----~~--~k~DV~S~Gv~l~el~tg----------~~p~~~~~~~~~~~~  714 (792)
                      .+...   .....+||.+|||||++.+..    |.  ..+||||||.++||+...          +.||.+....     
T Consensus       368 ~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~-----  442 (513)
T KOG2052|consen  368 SDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPS-----  442 (513)
T ss_pred             ccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCC-----
Confidence            54322   123467999999999996532    22  359999999999998753          2333322110     


Q ss_pred             HHHHHHHhhcccchhHhhhchhcccC-----CHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCCC
Q 003836          715 LTDWAYDRYQERTLEALVENDLEAMN-----NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP  780 (792)
Q Consensus       715 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~~  780 (792)
                            +.-.++..+.+-.+.+++..     +.+.+..+.++++.||..||+.|-|+-.|.+.|.++.+.+
T Consensus       443 ------DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~~  507 (513)
T KOG2052|consen  443 ------DPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNSD  507 (513)
T ss_pred             ------CCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcCh
Confidence                  00001111122223333333     3467888999999999999999999999999998876543

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=1.4e-34  Score=312.15  Aligned_cols=194  Identities=21%  Similarity=0.341  Sum_probs=159.1

Q ss_pred             hhcCccccceEEEeeecC-CCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceecc--CCceEEEEEeccC
Q 003836          507 EELGRGAFGTVYKGFVNM-GSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDE--GQNRLLVYEFMSN  583 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~--~~~~~lV~E~~~~  583 (792)
                      ++||+|+||+||+|.... ...+.+|+|++...  .....+.+|++++++++||||+++++++..  +...++||||+.+
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~   84 (317)
T cd07868           7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH   84 (317)
T ss_pred             cccccCCCeEEEEEEEccCCCCceEEEEEECCC--CCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC
Confidence            579999999999997543 34578999998653  234567899999999999999999998854  4567899999975


Q ss_pred             CCccccccCC---------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEE----cCCCCeEEeecCCCc
Q 003836          584 GTVASFLFGD---------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILL----DDHYNARISDFGLAK  650 (792)
Q Consensus       584 gsL~~~l~~~---------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl----~~~~~~kl~Dfg~a~  650 (792)
                       +|.+++...         ..+++..+..++.||+.||.|||+.   +|+||||||+|||+    +.++.+||+|||+++
T Consensus        85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~  160 (317)
T cd07868          85 -DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFAR  160 (317)
T ss_pred             -CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecCcee
Confidence             777665421         2478888999999999999999998   99999999999999    456789999999998


Q ss_pred             cccCCCC--CccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcc
Q 003836          651 LLTLDQS--HTNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNE  706 (792)
Q Consensus       651 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~  706 (792)
                      .......  .......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus       161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~  219 (317)
T cd07868         161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             ccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence            7643322  12234568999999999876 45899999999999999999999999643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.6e-34  Score=314.73  Aligned_cols=189  Identities=24%  Similarity=0.310  Sum_probs=161.4

Q ss_pred             HhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .+.+.+.||+|+||.||+|... ..++.||+|+....      ....|+.++++++|+||+++++++.+....++|+||+
T Consensus        67 ~y~~~~~lg~G~~g~Vy~~~~~-~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  139 (357)
T PHA03209         67 GYTVIKTLTPGSEGRVFVATKP-GQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHY  139 (357)
T ss_pred             CcEEEEEecCCCCeEEEEEEEC-CCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEcc
Confidence            3455678999999999999754 45678999975432      3456899999999999999999999999999999999


Q ss_pred             cCCCccccccC-CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          582 SNGTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       582 ~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      . ++|.+++.. ...+++..+..|+.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++.....  ...
T Consensus       140 ~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--~~~  213 (357)
T PHA03209        140 S-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA--PAF  213 (357)
T ss_pred             C-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccccC--ccc
Confidence            5 588888765 35789999999999999999999998   9999999999999999999999999999753322  122


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCC
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNI  703 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~  703 (792)
                      ....||+.|+|||.+.+..++.++|||||||++|||+++..++
T Consensus       214 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~  256 (357)
T PHA03209        214 LGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI  256 (357)
T ss_pred             ccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence            3456899999999999999999999999999999999976655

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=1e-34  Score=314.48  Aligned_cols=263  Identities=16%  Similarity=0.174  Sum_probs=194.0

Q ss_pred             hhhhcCcc--ccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          505 FKEELGRG--AFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       505 ~~~~lG~G--~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      +.++||+|  +|++||++... .+++.||+|++....  ....+.+++|+++++.++||||+++++++..++..++||||
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~   80 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYK-PTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF   80 (327)
T ss_pred             hhhhccccccceEEEEEEeec-ccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence            45789999  67899999754 567899999987542  23345688899999999999999999999999999999999


Q ss_pred             ccCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          581 MSNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       581 ~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      +++|+|.+++...  ..+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.++++||+...........
T Consensus        81 ~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~  157 (327)
T cd08227          81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQR  157 (327)
T ss_pred             cCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhcccccccc
Confidence            9999999998653  4588999999999999999999998   9999999999999999999999999875443211110


Q ss_pred             ------ccccccccCCccccccccc--CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhh-HHH----------HH
Q 003836          659 ------TNTAIRGTKGYVAPEWFRN--MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAI-LTD----------WA  719 (792)
Q Consensus       659 ------~~~~~~gt~~y~aPE~~~~--~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~-~~~----------~~  719 (792)
                            ......++..|+|||.+.+  ..++.++|||||||++|||++|+.||........... ...          ..
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (327)
T cd08227         158 LRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIP  237 (327)
T ss_pred             ccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchh
Confidence                  0112246778999999976  4689999999999999999999999975332111000 000          00


Q ss_pred             HHhhcccchhHhhh-----------------chhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          720 YDRYQERTLEALVE-----------------NDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       720 ~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .............+                 ..............+.+++.+||+.||++|||++|+++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~  306 (327)
T cd08227         238 AEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN  306 (327)
T ss_pred             hhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence            00000000000000                 00000112234567899999999999999999999987

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=2e-36  Score=295.61  Aligned_cols=246  Identities=23%  Similarity=0.319  Sum_probs=206.3

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCC
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNG  584 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~g  584 (792)
                      +.++||+|+||.|||+. +..+++.+|+|++.-  ....+++..|+.++++.+.+++|+++|.+.....+++|||||--|
T Consensus        37 i~~KLGEGSYGSV~KAI-H~EsG~v~AIK~VPV--~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAG  113 (502)
T KOG0574|consen   37 IVGKLGEGSYGSVHKAI-HRESGHVLAIKKVPV--DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAG  113 (502)
T ss_pred             HHHHhcCCcchHHHHHH-HhccCcEEEEEecCc--cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCC
Confidence            45789999999999995 456788999999864  445788999999999999999999999999999999999999999


Q ss_pred             CccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccccc
Q 003836          585 TVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAI  663 (792)
Q Consensus       585 sL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  663 (792)
                      ++.+.++.+ +.+.+..+..|++..++||+|||..   .-||||||+.||||+.+|.+||+|||+|-.+....... ..+
T Consensus       114 SiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKR-NTV  189 (502)
T KOG0574|consen  114 SISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKR-NTV  189 (502)
T ss_pred             cHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhhHHhh-Ccc
Confidence            999999754 7899999999999999999999998   88999999999999999999999999998765433222 346


Q ss_pred             cccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHH
Q 003836          664 RGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVT  743 (792)
Q Consensus       664 ~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  743 (792)
                      .|||-|||||++....|+.++||||||+...||..|+.|+...........++.               .+...-..+..
T Consensus       190 IGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT---------------~PPPTF~KPE~  254 (502)
T KOG0574|consen  190 IGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPT---------------KPPPTFKKPEE  254 (502)
T ss_pred             ccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccC---------------CCCCCCCChHh
Confidence            699999999999999999999999999999999999999865432111111100               01111123456


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          744 MLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       744 ~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .+.++-++++.||-.+|++|-|+-++++.
T Consensus       255 WS~~F~DFi~~CLiK~PE~R~TA~~L~~H  283 (502)
T KOG0574|consen  255 WSSEFNDFIRSCLIKKPEERKTALRLCEH  283 (502)
T ss_pred             hhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence            78899999999999999999999888763

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=1.1e-34  Score=307.70  Aligned_cols=247  Identities=28%  Similarity=0.328  Sum_probs=196.6

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccccc---cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ---DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      ..+.||+|+||+||++... .+++.+|+|++.....   .....+.+|+.++++++|+|++++++.+.+.+..++||||+
T Consensus         4 ~~~~ig~G~~g~v~~~~~~-~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~   82 (285)
T cd05630           4 QYRVLGKGGFGEVCACQVR-ATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLM   82 (285)
T ss_pred             eeEEeecCCCeEEEEEEEc-CCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEec
Confidence            3467999999999999654 4567999999865322   22346788999999999999999999999999999999999


Q ss_pred             cCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          582 SNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       582 ~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      ++++|.+++...  ..+++..+..++.|++.||.|||+.   +|+|+||||+||++++++.++|+|||++........  
T Consensus        83 ~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~--  157 (285)
T cd05630          83 NGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--  157 (285)
T ss_pred             CCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc--
Confidence            999999988543  3588999999999999999999998   999999999999999999999999999876543221  


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      .....|+..|+|||.+.+..++.++||||||+++|||++|+.||.............             .+.+. ....
T Consensus       158 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~-------------~~~~~-~~~~  223 (285)
T cd05630         158 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE-------------RLVKE-VQEE  223 (285)
T ss_pred             ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHH-------------hhhhh-hhhh
Confidence            123468999999999999999999999999999999999999997543211110000             00000 0011


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCC-----HHhHHH
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPT-----MRKVTQ  771 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs-----~~evl~  771 (792)
                      ........+.+++..||+.||++|||     ++|+++
T Consensus       224 ~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~  260 (285)
T cd05630         224 YSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE  260 (285)
T ss_pred             cCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence            12234456789999999999999999     888886

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=1e-34  Score=337.71  Aligned_cols=256  Identities=24%  Similarity=0.367  Sum_probs=198.3

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccc---cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ---DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      .+.++||+|+||.||+|.. ..+++.||+|++.....   ...+++.+|++++++++||||+++++++.+++..++||||
T Consensus         5 eIi~~LGkGgfG~VYlA~d-~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY   83 (932)
T PRK13184          5 DIIRLIGKGGMGEVYLAYD-PVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPY   83 (932)
T ss_pred             EEEEEEecCCCEEEEEEEE-CCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEc
Confidence            3457899999999999965 34567899999875322   2346789999999999999999999999999999999999


Q ss_pred             ccCCCccccccCC-----------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCC
Q 003836          581 MSNGTVASFLFGD-----------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLA  649 (792)
Q Consensus       581 ~~~gsL~~~l~~~-----------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a  649 (792)
                      +++|+|.+++...           ...++..+++++.||++||+|||+.   +|+||||||+|||++.++.+||+|||++
T Consensus        84 ~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFGLA  160 (932)
T PRK13184         84 IEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWGAA  160 (932)
T ss_pred             CCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecCcc
Confidence            9999999988531           2345677889999999999999998   9999999999999999999999999999


Q ss_pred             ccccCCCC-----------------CccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhh
Q 003836          650 KLLTLDQS-----------------HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDK  712 (792)
Q Consensus       650 ~~~~~~~~-----------------~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~  712 (792)
                      +.......                 .......||+.|+|||.+.+..++.++|||||||++|||+||+.||.......  
T Consensus       161 k~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k--  238 (932)
T PRK13184        161 IFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK--  238 (932)
T ss_pred             eecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh--
Confidence            87622110                 01112468999999999999999999999999999999999999996532110  


Q ss_pred             hhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCC-CHHhHHHHhccCcC
Q 003836          713 AILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRP-TMRKVTQMLEGVVE  778 (792)
Q Consensus       713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RP-s~~evl~~L~~~~~  778 (792)
                      ..     ...        .+..........+.+..+.+++.+||+.||++|| +++++++.|+..++
T Consensus       239 i~-----~~~--------~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq  292 (932)
T PRK13184        239 IS-----YRD--------VILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ  292 (932)
T ss_pred             hh-----hhh--------hccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            00     000        0000000000123445678899999999999995 67777777766543

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.5e-35  Score=316.40  Aligned_cols=241  Identities=24%  Similarity=0.269  Sum_probs=187.8

Q ss_pred             cCccccceEEEeeecCCCceEEEEEEcccccc---cchHHHHHHHHHhccc---CCCCcccccceeccCCceEEEEEecc
Q 003836          509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ---DSEKEFKAEVNGIGQT---HHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       509 lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l---~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      ||+|+||+||++... .+++.||+|++.+...   .....+..|..++.+.   +||||+++++.+.+.+..++||||++
T Consensus         1 lG~G~~g~Vy~~~~~-~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~   79 (330)
T cd05586           1 IGKGTFGQVYQVRKK-DTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMS   79 (330)
T ss_pred             CCCCCceEEEEEEEC-CCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCC
Confidence            799999999999754 4567899999865321   1223445566666655   69999999999999999999999999


Q ss_pred             CCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          583 NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       583 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      +|+|..++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++...... .....
T Consensus        80 ~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~-~~~~~  155 (330)
T cd05586          80 GGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDN-KTTNT  155 (330)
T ss_pred             CChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC-CCccC
Confidence            999999998888899999999999999999999998   99999999999999999999999999987543222 22234


Q ss_pred             ccccCCcccccccccC-CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCC
Q 003836          663 IRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN  741 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  741 (792)
                      ..||+.|+|||.+.+. .++.++|||||||++|||++|+.||........   .     ....        ...... ..
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~---~-----~~i~--------~~~~~~-~~  218 (330)
T cd05586         156 FCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQM---Y-----RNIA--------FGKVRF-PK  218 (330)
T ss_pred             ccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHH---H-----HHHH--------cCCCCC-CC
Confidence            5689999999998764 489999999999999999999999965422110   0     0000        000000 01


Q ss_pred             HHHHHHHHHHHHHccccCCCCCC----CHHhHHH
Q 003836          742 VTMLHRFVMVAFWCIQEDPSHRP----TMRKVTQ  771 (792)
Q Consensus       742 ~~~~~~l~~l~~~Cl~~~p~~RP----s~~evl~  771 (792)
                      .....++.+++.+||+.+|.+||    ++.++++
T Consensus       219 ~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~  252 (330)
T cd05586         219 NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE  252 (330)
T ss_pred             ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence            12345678899999999999998    4566554

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.3e-34  Score=302.37  Aligned_cols=246  Identities=24%  Similarity=0.355  Sum_probs=200.7

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +.+.+.||.|++|.||+|... .+++.+++|.+.... ......+.+|++++++++|+||+++++++.++...++|+||+
T Consensus         3 y~~~~~lg~g~~~~v~~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (274)
T cd06609           3 FTLLECIGKGSFGEVYKAIDK-RTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC   81 (274)
T ss_pred             hhhhhhhcCCCCeEEEEEEEC-CCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence            345678999999999999764 456789999987543 334567899999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      ++++|.+++... .+++..+..++.|++.||.|||+.   +++|+||+|+||++++++.++|+|||+++...... ....
T Consensus        82 ~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-~~~~  156 (274)
T cd06609          82 GGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM-SKRN  156 (274)
T ss_pred             CCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeecccc-cccc
Confidence            999999998765 789999999999999999999998   99999999999999999999999999998765432 2223


Q ss_pred             cccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCC
Q 003836          662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN  741 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  741 (792)
                      ...+++.|+|||.+.+..++.++||||||+++|||++|+.||........   .     ....         ........
T Consensus       157 ~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~---~-----~~~~---------~~~~~~~~  219 (274)
T cd06609         157 TFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRV---L-----FLIP---------KNNPPSLE  219 (274)
T ss_pred             cccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHH---H-----HHhh---------hcCCCCCc
Confidence            34578899999999988899999999999999999999999964321100   0     0000         00011111


Q ss_pred             HH-HHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          742 VT-MLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       742 ~~-~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .. .+..+.+++.+||+.+|++||+++++++
T Consensus       220 ~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~  250 (274)
T cd06609         220 GNKFSKPFKDFVSLCLNKDPKERPSAKELLK  250 (274)
T ss_pred             ccccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence            11 4567889999999999999999999987

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=2.8e-34  Score=301.55  Aligned_cols=246  Identities=22%  Similarity=0.303  Sum_probs=192.9

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc-----ccchHHHHHHHHHhcccCCCCcccccceecc--CCceEEE
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-----QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDE--GQNRLLV  577 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-----~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~--~~~~~lV  577 (792)
                      ..+.||+|+||.||++... .++..+++|++....     ....+.+.+|+.++++++|+||+++++++.+  ....+++
T Consensus         6 ~~~~lg~g~~g~vy~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~   84 (266)
T cd06651           6 RGKLLGQGAFGRVYLCYDV-DTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIF   84 (266)
T ss_pred             ccceecCCCCEEEEEEEEc-CCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEE
Confidence            4578999999999999643 456789999886432     1233568899999999999999999998865  3567899


Q ss_pred             EEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC
Q 003836          578 YEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      +||+++++|.+++.....+++.....++.|++.||+|||+.   +|+|+||+|+||+++.++.+||+|||+++.......
T Consensus        85 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~  161 (266)
T cd06651          85 MEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM  161 (266)
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCccccccccc
Confidence            99999999999998777789999999999999999999998   999999999999999999999999999986543211


Q ss_pred             --CccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          658 --HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       658 --~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                        .......++..|+|||.+.+..++.++|||||||++|||++|+.||.........                .......
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~----------------~~~~~~~  225 (266)
T cd06651         162 SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAI----------------FKIATQP  225 (266)
T ss_pred             cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHH----------------HHHhcCC
Confidence              1122345788999999999888999999999999999999999999653211100                0001111


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .....+....+.+.+++ +||..+|++||+++||++
T Consensus       226 ~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~  260 (266)
T cd06651         226 TNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLR  260 (266)
T ss_pred             CCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence            11222233344555666 688899999999999987

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=4.3e-34  Score=304.48  Aligned_cols=249  Identities=22%  Similarity=0.322  Sum_probs=199.1

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.++||.|+||.||+|... .+++.+++|.+........+.+.+|+.++++++|+||+++++.+..+...++||||++
T Consensus        14 y~i~~~lg~g~~g~vy~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   92 (292)
T cd06644          14 WEIIGELGDGAFGKVYKAKNK-ETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCP   92 (292)
T ss_pred             hhhhheecCCCCeEEEEEEEC-CCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCC
Confidence            456678999999999999764 4567899999987666667789999999999999999999999999999999999999


Q ss_pred             CCCccccccC-CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          583 NGTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       583 ~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      +++|..++.. ...+++..+..++.|++.||+|||+.   +++|+||||+||+++.++.+||+|||++....... ....
T Consensus        93 ~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~-~~~~  168 (292)
T cd06644          93 GGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL-QRRD  168 (292)
T ss_pred             CCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceeccccc-cccc
Confidence            9999988755 35689999999999999999999998   99999999999999999999999999987543221 1223


Q ss_pred             cccccCCcccccccc-----cCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          662 AIRGTKGYVAPEWFR-----NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~-----~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                      ...+++.|+|||.+.     ...++.++|||||||++|||++|+.||........   ...     .....     .+  
T Consensus       169 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~---~~~-----~~~~~-----~~--  233 (292)
T cd06644         169 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV---LLK-----IAKSE-----PP--  233 (292)
T ss_pred             eecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHH---HHH-----HhcCC-----Cc--
Confidence            345788999999984     34578899999999999999999999865322100   000     00000     00  


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ....+...+.++.+++.+||+.+|++||+++++++
T Consensus       234 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  268 (292)
T cd06644         234 TLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE  268 (292)
T ss_pred             cCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            01112234557889999999999999999999986

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.3e-34  Score=304.38  Aligned_cols=255  Identities=27%  Similarity=0.366  Sum_probs=201.7

Q ss_pred             hhhhhhcCccccceEEEeeecCCC---ceEEEEEEcccccc-cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGS---SNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~---~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~  578 (792)
                      ..+.+.||+|+||.||+|......   ...+|+|.+..... ....++.+|+.++++++|+||+++++++.. ...++|+
T Consensus         9 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v~   87 (279)
T cd05057           9 LEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLIT   87 (279)
T ss_pred             cEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEEE
Confidence            445678999999999999764322   23689998875432 345678999999999999999999999987 7889999


Q ss_pred             EeccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC
Q 003836          579 EFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       579 E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      ||+++|+|.+++... ..+++..+.+++.||+.||+|||+.   +|+|+||||+|||+++++.+||+|||+++.......
T Consensus        88 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~  164 (279)
T cd05057          88 QLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEK  164 (279)
T ss_pred             ecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCcccccccCccc
Confidence            999999999999764 4689999999999999999999998   999999999999999999999999999987653322


Q ss_pred             Ccc-ccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          658 HTN-TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       658 ~~~-~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                      ... ....++..|+|||.+....++.++||||||+++||+++ |+.||........       .          ..+...
T Consensus       165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-------~----------~~~~~~  227 (279)
T cd05057         165 EYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEI-------P----------DLLEKG  227 (279)
T ss_pred             ceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHH-------H----------HHHhCC
Confidence            111 11223568999999988899999999999999999999 9999865422110       0          001111


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                      .....+......+.+++.+||..+|.+||++.++++.|+.+..
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05057         228 ERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR  270 (279)
T ss_pred             CCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            1111122234567889999999999999999999999988643

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=1.2e-34  Score=311.48  Aligned_cols=263  Identities=18%  Similarity=0.269  Sum_probs=195.4

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      ...++||+|+||.||+|... .+++.+|+|+++... ......+.+|++++++++|+||+++++++..++..++||||++
T Consensus         9 ~~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   87 (309)
T cd07872           9 IKLEKLGEGTYATVFKGRSK-LTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLD   87 (309)
T ss_pred             EEEEEecccCCEEEEEEEec-CCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCC
Confidence            34578999999999999754 456789999987543 2334567899999999999999999999999999999999998


Q ss_pred             CCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          583 NGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       583 ~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      + +|.+++... ..+++..+..++.||+.||+|||+.   +|+||||||+|||+++++.+||+|||+++....... ...
T Consensus        88 ~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-~~~  162 (309)
T cd07872          88 K-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK-TYS  162 (309)
T ss_pred             C-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCCcc-ccc
Confidence            6 788877654 4578889999999999999999998   999999999999999999999999999976433222 122


Q ss_pred             cccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH-------HHHhhcccc-hhHhh
Q 003836          662 AIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW-------AYDRYQERT-LEALV  732 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~-------~~~~~~~~~-~~~~~  732 (792)
                      ...+++.|+|||.+.+ ..++.++||||||+++|||++|+.||...............       .+....... ....-
T Consensus       163 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (309)
T cd07872         163 NEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYN  242 (309)
T ss_pred             cccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhh
Confidence            3457899999998865 56899999999999999999999999654322111111000       000000000 00000


Q ss_pred             hchhcc----cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          733 ENDLEA----MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       733 ~~~~~~----~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .+....    ........++.+++.+||+.||.+|||++|+++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h  286 (309)
T cd07872         243 FPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH  286 (309)
T ss_pred             cCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence            000000    0011234577899999999999999999999873

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=1.5e-34  Score=313.88  Aligned_cols=196  Identities=28%  Similarity=0.438  Sum_probs=168.3

Q ss_pred             HhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccC-C-----CCcccccceeccCCceE
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH-H-----KNLVRLLGYCDEGQNRL  575 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-h-----~niv~l~g~~~~~~~~~  575 (792)
                      +|.+.+.||+|.||.|.|+. +..+++.||||++++. ..-..+...|+++|..|+ |     -|+|+++++|...++.+
T Consensus       187 rY~V~e~LGkGtFGQVvk~~-d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlc  264 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAY-DHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLC  264 (586)
T ss_pred             EEEEEEEecccccceeEEEE-ecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccccee
Confidence            45567899999999999995 5577889999999875 334566788999999986 3     56999999999999999


Q ss_pred             EEEEeccCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC--CCeEEeecCCCcc
Q 003836          576 LVYEFMSNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH--YNARISDFGLAKL  651 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~--~~~kl~Dfg~a~~  651 (792)
                      ||+|.++. +|.++|..+  ..++...+..|+.||+.||.+||+.   +|||+||||+||||.+-  ..+||+|||.+..
T Consensus       265 iVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~  340 (586)
T KOG0667|consen  265 IVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGSSCF  340 (586)
T ss_pred             eeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEecccccc
Confidence            99999966 999999877  4678999999999999999999998   99999999999999754  4799999999986


Q ss_pred             ccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcch
Q 003836          652 LTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEI  707 (792)
Q Consensus       652 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~  707 (792)
                      ....-.    ....+..|+|||++.+.+|+.+.||||||||+.||++|...|..+.
T Consensus       341 ~~q~vy----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~n  392 (586)
T KOG0667|consen  341 ESQRVY----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDN  392 (586)
T ss_pred             cCCcce----eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCC
Confidence            542221    4557889999999999999999999999999999999977665543

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.5e-34  Score=320.61  Aligned_cols=262  Identities=20%  Similarity=0.221  Sum_probs=198.3

Q ss_pred             HhhhhhhcCccccceEEEeeecC-CCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNM-GSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      .+.+.+.||+|+||.||++.... ...+.|++|.+...     +...+|++++++++|+||+++++++......++|||+
T Consensus        93 ~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~  167 (392)
T PHA03207         93 QYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPK  167 (392)
T ss_pred             ceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehh
Confidence            35566889999999999986532 34578999987643     3457899999999999999999999999999999999


Q ss_pred             ccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC-c
Q 003836          581 MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH-T  659 (792)
Q Consensus       581 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~-~  659 (792)
                      +. ++|.+++.....+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++........ .
T Consensus       168 ~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~  243 (392)
T PHA03207        168 YK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQ  243 (392)
T ss_pred             cC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccccCccccccc
Confidence            96 58888886667899999999999999999999998   9999999999999999999999999999865443222 2


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHh------hcccc---h-h
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDR------YQERT---L-E  729 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~------~~~~~---~-~  729 (792)
                      .....||+.|+|||++....++.++|||||||++|||++|+.||...........+.......      +....   + .
T Consensus       244 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~  323 (392)
T PHA03207        244 CYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCK  323 (392)
T ss_pred             ccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHH
Confidence            234568999999999999999999999999999999999999996543211111111000000      00000   0 0


Q ss_pred             Hh--hhchhcccCC-------HHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          730 AL--VENDLEAMNN-------VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       730 ~~--~~~~~~~~~~-------~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .+  .....+....       .....++.+++.+||+.+|++|||+.|++..
T Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~  375 (392)
T PHA03207        324 HFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL  375 (392)
T ss_pred             HHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence            00  0000000000       1124567889999999999999999999984

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=1.9e-34  Score=308.64  Aligned_cols=261  Identities=20%  Similarity=0.271  Sum_probs=195.1

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      .+.++||+|+||.||+|... .+++.||+|.+.... ......+.+|+.++++++|+||+++++++......++||||++
T Consensus         9 ~~~~~lg~g~~g~vy~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~   87 (301)
T cd07873           9 IKLDKLGEGTYATVYKGRSK-LTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD   87 (301)
T ss_pred             EEeeEeccCcCEEEEEEEEc-CCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEeccc
Confidence            34578999999999999754 456789999986432 2334567899999999999999999999999999999999998


Q ss_pred             CCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          583 NGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       583 ~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                       ++|.+++... ..+++..+..++.||++||+|||+.   +|+|+||||+|||+++++.+||+|||+++....... ...
T Consensus        88 -~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~  162 (301)
T cd07873          88 -KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK-TYS  162 (301)
T ss_pred             -cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC-ccc
Confidence             5888888654 4678899999999999999999998   999999999999999999999999999976433221 122


Q ss_pred             cccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhh-------
Q 003836          662 AIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVE-------  733 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  733 (792)
                      ...+++.|+|||.+.+ ..++.++|||||||++|||++|+.||................ ....+.....++.       
T Consensus       163 ~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  241 (301)
T cd07873         163 NEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRIL-GTPTEETWPGILSNEEFKSY  241 (301)
T ss_pred             ccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHc-CCCChhhchhhhcccccccc
Confidence            3346889999998865 457899999999999999999999997543221110000000 0000000000000       


Q ss_pred             --chhcc----cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          734 --NDLEA----MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       734 --~~~~~----~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                        +....    .........+.+++.+||+.||.+|||++|+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~  285 (301)
T cd07873         242 NYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK  285 (301)
T ss_pred             ccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence              00000    001123456789999999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-34  Score=306.88  Aligned_cols=265  Identities=22%  Similarity=0.267  Sum_probs=202.9

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      +.+.+.||+|++|.||+|... .+++.|++|+++...  ....+.+.+|++++++++|+||+++++++..++..++||||
T Consensus         3 y~~~~~i~~g~~~~v~~~~~~-~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   81 (288)
T cd07833           3 YEVLGVVGEGAYGVVLKCRNK-ATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY   81 (288)
T ss_pred             eeEEEEecccCCeeEEEEEeC-CCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence            345678999999999999764 346789999987532  33357899999999999999999999999999999999999


Q ss_pred             ccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          581 MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       581 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      ++++.+..+......+++..+..++.||+.||+|||+.   +++|+||+|+||++++++.+||+|||++...........
T Consensus        82 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~  158 (288)
T cd07833          82 VERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPL  158 (288)
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccc
Confidence            99988877776666789999999999999999999998   999999999999999999999999999987665443233


Q ss_pred             ccccccCCcccccccccC-CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHH-------HHhhc-ccchh--
Q 003836          661 TAIRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWA-------YDRYQ-ERTLE--  729 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~-------~~~~~-~~~~~--  729 (792)
                      ....++..|+|||++.+. .++.++||||||+++|+|++|+.||................       ...+. .....  
T Consensus       159 ~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (288)
T cd07833         159 TDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGV  238 (288)
T ss_pred             cCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccccc
Confidence            445678899999999887 88999999999999999999999986543221110000000       00000 00000  


Q ss_pred             ---Hhhhc-hhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          730 ---ALVEN-DLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       730 ---~~~~~-~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                         ...+. ......+...+.++.+++.+||+.+|++||+++++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         239 AFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             ccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence               00000 0001112223678999999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=2.7e-34  Score=306.56  Aligned_cols=247  Identities=23%  Similarity=0.337  Sum_probs=200.9

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCC
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNG  584 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~g  584 (792)
                      +.+.||.|++|.||+|.. ..+++.|++|.+........+.+.+|+.+++.++|+||+++++++...+..++|+||++++
T Consensus        23 ~~~~lg~g~~g~vy~~~~-~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  101 (296)
T cd06655          23 RYEKIGQGASGTVFTAID-VATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGG  101 (296)
T ss_pred             EEEEEecCCCeEEEEEEE-cCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCC
Confidence            446799999999999964 3456789999987655556678899999999999999999999999999999999999999


Q ss_pred             CccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccccc
Q 003836          585 TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR  664 (792)
Q Consensus       585 sL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  664 (792)
                      +|.+++.. ..+++.++..++.|++.||+|||+.   +++|+||||+||+++.++.+||+|||++......... .....
T Consensus       102 ~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~-~~~~~  176 (296)
T cd06655         102 SLTDVVTE-TCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSK-RSTMV  176 (296)
T ss_pred             cHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhccccccc-CCCcC
Confidence            99998864 3589999999999999999999998   9999999999999999999999999998865433221 22345


Q ss_pred             ccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHH
Q 003836          665 GTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTM  744 (792)
Q Consensus       665 gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  744 (792)
                      ++..|+|||.+.+..++.++|||||||++|+|++|+.||............    ..           ........+...
T Consensus       177 ~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~----~~-----------~~~~~~~~~~~~  241 (296)
T cd06655         177 GTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI----AT-----------NGTPELQNPEKL  241 (296)
T ss_pred             CCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH----Hh-----------cCCcccCCcccC
Confidence            788999999999888999999999999999999999999664322111000    00           000001112234


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          745 LHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       745 ~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ...+.+++.+||+.+|.+||++.++++.
T Consensus       242 ~~~~~~li~~~l~~dp~~Rpt~~~il~~  269 (296)
T cd06655         242 SPIFRDFLNRCLEMDVEKRGSAKELLQH  269 (296)
T ss_pred             CHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence            4578889999999999999999999964

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=2.8e-34  Score=304.79  Aligned_cols=247  Identities=26%  Similarity=0.314  Sum_probs=196.3

Q ss_pred             hhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      .+.||+|+||+||++... .+++.+|+|++....   ......+.+|++++++++|+|++++++.+..++..++||||++
T Consensus         5 ~~~lg~G~~g~vy~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~   83 (285)
T cd05632           5 YRVLGKGGFGEVCACQVR-ATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMN   83 (285)
T ss_pred             EEEEecCCCeEEEEEEEC-CCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEecc
Confidence            467999999999999764 456799999986532   1223457889999999999999999999999999999999999


Q ss_pred             CCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          583 NGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       583 ~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +++|.+++...  ..+++..+..++.|++.||.|||+.   +|+||||||+||++++++.+||+|||++.......  ..
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~  158 (285)
T cd05632          84 GGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE--SI  158 (285)
T ss_pred             CccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCCC--cc
Confidence            99999888653  4689999999999999999999998   99999999999999999999999999997653221  12


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ....|+..|+|||.+.+..++.++||||||+++|||++|+.||............   . .        .+...  ....
T Consensus       159 ~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~---~-~--------~~~~~--~~~~  224 (285)
T cd05632         159 RGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEV---D-R--------RVLET--EEVY  224 (285)
T ss_pred             cCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---H-H--------hhhcc--cccc
Confidence            3346899999999999889999999999999999999999999754322111000   0 0        00000  0111


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCC-----HHhHHHH
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRPT-----MRKVTQM  772 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RPs-----~~evl~~  772 (792)
                      .......+.+++..||+.+|++||+     ++++++.
T Consensus       225 ~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05632         225 SAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH  261 (285)
T ss_pred             CccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence            2234556788999999999999999     6677663

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=2e-34  Score=306.34  Aligned_cols=261  Identities=23%  Similarity=0.278  Sum_probs=191.1

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccc--cchHHHHHHHHHhccc---CCCCcccccceecc-----CCc
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ--DSEKEFKAEVNGIGQT---HHKNLVRLLGYCDE-----GQN  573 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l---~h~niv~l~g~~~~-----~~~  573 (792)
                      .+.+.||+|+||+||++... .+++.+|+|.++....  .....+.+|+.+++++   +||||+++++++..     ...
T Consensus         3 ~~~~~lg~g~~g~v~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~   81 (288)
T cd07863           3 EPVAEIGVGAYGTVYKARDP-HSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK   81 (288)
T ss_pred             eEeeEEeecCCeEEEEEEEC-CCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence            34578999999999999754 4577999999875322  2234566777777665   79999999998854     345


Q ss_pred             eEEEEEeccCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCcc
Q 003836          574 RLLVYEFMSNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKL  651 (792)
Q Consensus       574 ~~lV~E~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~  651 (792)
                      .++||||+++ +|.+++...  ..+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++.
T Consensus        82 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~~~~  157 (288)
T cd07863          82 VTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGLARI  157 (288)
T ss_pred             EEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCcccc
Confidence            7899999985 888888653  3578999999999999999999998   999999999999999999999999999987


Q ss_pred             ccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHH----HHhhcccc
Q 003836          652 LTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWA----YDRYQERT  727 (792)
Q Consensus       652 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~----~~~~~~~~  727 (792)
                      .....  ......++..|+|||.+.+..++.++|||||||++|||++|+.||................    ...+....
T Consensus       158 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (288)
T cd07863         158 YSCQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDV  235 (288)
T ss_pred             ccCcc--cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccc
Confidence            64322  2233457899999999998899999999999999999999999986543321111110000    00000000


Q ss_pred             -h-hHhhhchh---cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          728 -L-EALVENDL---EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       728 -~-~~~~~~~~---~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                       . .....+..   ..........++.+++.+||+.||++|||+.|++.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         236 TLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             cccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence             0 00000000   00011123466789999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=2.4e-34  Score=326.43  Aligned_cols=259  Identities=20%  Similarity=0.280  Sum_probs=187.7

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccC------CCCcccccceeccC-CceE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH------HKNLVRLLGYCDEG-QNRL  575 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~------h~niv~l~g~~~~~-~~~~  575 (792)
                      +.+.++||+|+||+||++... ..++.||||+++... ....++..|+.++++++      |.+++++++++... .+.+
T Consensus       131 y~i~~~lG~G~fg~V~~a~~~-~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~  208 (467)
T PTZ00284        131 FKILSLLGEGTFGKVVEAWDR-KRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMC  208 (467)
T ss_pred             EEEEEEEEeccCEEEEEEEEc-CCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEE
Confidence            345578999999999999754 456789999986532 22345566776666654      45588898888654 4678


Q ss_pred             EEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCC----------------
Q 003836          576 LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY----------------  639 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~----------------  639 (792)
                      +|||++ +++|.+++.....+++..+..|+.||+.||.|||++  .+|+||||||+|||++.++                
T Consensus       209 iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~  285 (467)
T PTZ00284        209 IVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILMETSDTVVDPVTNRALPPDPC  285 (467)
T ss_pred             EEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEecCCcccccccccccCCCCc
Confidence            999988 678998888778899999999999999999999973  2899999999999998765                


Q ss_pred             CeEEeecCCCccccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHH---
Q 003836          640 NARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILT---  716 (792)
Q Consensus       640 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~---  716 (792)
                      .+||+|||.+....    .......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+.   
T Consensus       286 ~vkl~DfG~~~~~~----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~  361 (467)
T PTZ00284        286 RVRICDLGGCCDER----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTL  361 (467)
T ss_pred             eEEECCCCccccCc----cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHc
Confidence            49999999876422    22345679999999999999999999999999999999999999997543221111110   


Q ss_pred             -----HHHHHhhcccchhHhhhchh---------------c--ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          717 -----DWAYDRYQERTLEALVENDL---------------E--AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       717 -----~~~~~~~~~~~~~~~~~~~~---------------~--~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                           .|.... .......+.+...               .  ..........+++|+.+||+.||++|||++|+++
T Consensus       362 g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~  437 (467)
T PTZ00284        362 GRLPSEWAGRC-GTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT  437 (467)
T ss_pred             CCCCHHHHhhc-cchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence                 010000 0000000100000               0  0000112356789999999999999999999997

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=6.4e-34  Score=299.18  Aligned_cols=251  Identities=24%  Similarity=0.374  Sum_probs=186.9

Q ss_pred             hcCccccceEEEeeecCCC-ceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCCC
Q 003836          508 ELGRGAFGTVYKGFVNMGS-SNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGT  585 (792)
Q Consensus       508 ~lG~G~~g~Vy~g~~~~~~-~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~gs  585 (792)
                      +||+|+||.||+|...... ...+++|.+.... ....+.+.+|+.++++++||||+++++.|.+....++||||+++|+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   81 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD   81 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence            5999999999999754332 3356677766433 2345789999999999999999999999999999999999999999


Q ss_pred             ccccccCC----CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC-CCcc
Q 003836          586 VASFLFGD----SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ-SHTN  660 (792)
Q Consensus       586 L~~~l~~~----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~-~~~~  660 (792)
                      |.+++...    ...++..+..++.||++||+|||+.   +++|+||||+|||++.++.+||+|||++....... ....
T Consensus        82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~  158 (268)
T cd05086          82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE  158 (268)
T ss_pred             HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence            99999753    2356677889999999999999998   99999999999999999999999999986432211 1122


Q ss_pred             ccccccCCccccccccc-------CCCCcccceehHHHHHHHHHhc-CcCCCcchhhhhhhhHHHHHHHhhcccchhHhh
Q 003836          661 TAIRGTKGYVAPEWFRN-------MPITVKVDVYSYGVLLLEIICL-RRNIDNEISKVDKAILTDWAYDRYQERTLEALV  732 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~-------~~~~~k~DV~S~Gv~l~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  732 (792)
                      ....++..|+|||++..       ..++.++||||||+++|||+++ ..||.......   .+..    ... +....+.
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~---~~~~----~~~-~~~~~~~  230 (268)
T cd05086         159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDRE---VLNH----VIK-DQQVKLF  230 (268)
T ss_pred             cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHH---HHHH----HHh-hcccccC
Confidence            33457889999998743       2467899999999999999975 55664332211   0000    000 1111112


Q ss_pred             hchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhc
Q 003836          733 ENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE  774 (792)
Q Consensus       733 ~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~  774 (792)
                      ++.+.    .....++.+++..|| .+|++||++++|++.|.
T Consensus       231 ~~~~~----~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         231 KPQLE----LPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             CCccC----CCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence            22221    123456777888999 57999999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=2.2e-34  Score=308.38  Aligned_cols=251  Identities=28%  Similarity=0.413  Sum_probs=196.1

Q ss_pred             hhhcCccccceEEEeeecCCCc---eEEEEEEcccccc-cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          506 KEELGRGAFGTVYKGFVNMGSS---NHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~---~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .+.||+|+||.||+|.......   ..+|+|.+..... ....++.+|+.++++++|+||+++++++... ..++++||+
T Consensus        12 ~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~e~~   90 (303)
T cd05110          12 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLM   90 (303)
T ss_pred             ccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cceeeehhc
Confidence            4679999999999997643322   3578998875432 2344788999999999999999999998754 467999999


Q ss_pred             cCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc-
Q 003836          582 SNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT-  659 (792)
Q Consensus       582 ~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~-  659 (792)
                      ++|+|.+++... ..+++..+..++.|++.||+|||+.   +|+|+||||+|||+++++.+||+|||+++......... 
T Consensus        91 ~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~  167 (303)
T cd05110          91 PHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYN  167 (303)
T ss_pred             CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEccccccccccCcccccc
Confidence            999999998765 3678999999999999999999998   99999999999999999999999999998765333221 


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      .....++..|+|||.+.+..++.++||||||+++|||++ |+.||........    ..             ++......
T Consensus       168 ~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~----~~-------------~~~~~~~~  230 (303)
T cd05110         168 ADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREI----PD-------------LLEKGERL  230 (303)
T ss_pred             cCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH----HH-------------HHHCCCCC
Confidence            122335678999999998999999999999999999997 8888865321110    01             01111111


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      ..+......+.+++..||..+|++||+++++++.|+.+.
T Consensus       231 ~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~  269 (303)
T cd05110         231 PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMA  269 (303)
T ss_pred             CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            111223456789999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=1.8e-34  Score=306.31  Aligned_cols=261  Identities=22%  Similarity=0.290  Sum_probs=199.3

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccc--cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ--DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .+.++||+|+||.||++... ..++.+|+|++.....  ...+.+.+|++++++++|+||+++++++..++..++|+||+
T Consensus         4 ~~~~~lg~g~~~~vy~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   82 (286)
T cd07846           4 ENLGLVGEGSYGMVMKCKHK-ETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFV   82 (286)
T ss_pred             eEeeeeccCCCeEEEEEEEC-CCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecC
Confidence            34578999999999999764 3467899999865332  23567889999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      ++++|.++......+++..+..++.||++||+|||+.   +++|+||+|+||++++++.+||+|||+++...... ....
T Consensus        83 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~-~~~~  158 (286)
T cd07846          83 DHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG-EVYT  158 (286)
T ss_pred             CccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc-cccC
Confidence            9999998877666789999999999999999999998   99999999999999999999999999998754333 2223


Q ss_pred             cccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhh-------
Q 003836          662 AIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVE-------  733 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  733 (792)
                      ...++..|+|||.+.+ ..++.++||||||+++|||++|+.||...........+.... ....+. .....+       
T Consensus       159 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~  236 (286)
T cd07846         159 DYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCL-GNLIPR-HQEIFQKNPLFAG  236 (286)
T ss_pred             cccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHh-CCCchh-hHHHhccchHhhc
Confidence            3457889999999865 457889999999999999999998886543221111111000 000000 000000       


Q ss_pred             ---chhcc-----cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          734 ---NDLEA-----MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       734 ---~~~~~-----~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                         +....     ......+..+.+++.+||+.+|++||+++++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         237 MRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             cccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence               00000     001134567899999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=5.6e-35  Score=313.83  Aligned_cols=246  Identities=27%  Similarity=0.399  Sum_probs=195.8

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEE--Ecccccc--cchHHHHHHHHHhcccCCCCcccccceeccCCc--eEEEE
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVK--KLNSVFQ--DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQN--RLLVY  578 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK--~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~--~~lV~  578 (792)
                      |.++||+|+|-+||||.. ...+..||--  ++.+..+  ...+.|..|+++|+.|+|+||++++.+..+...  ..+|.
T Consensus        44 ~~evLGrGafKtVYka~D-e~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT  122 (632)
T KOG0584|consen   44 FDEVLGRGAFKTVYKAFD-EEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT  122 (632)
T ss_pred             hhhhcccccceeeeeccc-cccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence            557899999999999965 4556566632  2223223  334789999999999999999999998876655  77999


Q ss_pred             EeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC-CCeEEeecCCCccccCCCC
Q 003836          579 EFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH-YNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       579 E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~-~~~kl~Dfg~a~~~~~~~~  657 (792)
                      |.|..|+|..|+.+.+..+.+.+..|++||++||.|||++ .++|||||||.+||+|+.+ |.+||+|+|+|....... 
T Consensus       123 EL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~-  200 (632)
T KOG0584|consen  123 ELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH-  200 (632)
T ss_pred             ecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhccc-
Confidence            9999999999999999999999999999999999999997 5689999999999999865 899999999999875332 


Q ss_pred             CccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhc
Q 003836          658 HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLE  737 (792)
Q Consensus       658 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  737 (792)
                        ...+.|||.|||||++. ..|++..||||||++++||+|+..|+..-.....       .+.+...+...+-+..   
T Consensus       201 --aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQ-------IYKKV~SGiKP~sl~k---  267 (632)
T KOG0584|consen  201 --AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQ-------IYKKVTSGIKPAALSK---  267 (632)
T ss_pred             --cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHH-------HHHHHHcCCCHHHhhc---
Confidence              23478999999999987 7899999999999999999999999865432211       1122222221111111   


Q ss_pred             ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          738 AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       738 ~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                           -.-.++.++|.+||.. .++|||+.|+++.
T Consensus       268 -----V~dPevr~fIekCl~~-~~~R~sa~eLL~d  296 (632)
T KOG0584|consen  268 -----VKDPEVREFIEKCLAT-KSERLSAKELLKD  296 (632)
T ss_pred             -----cCCHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence                 1124678899999999 9999999999963

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.8e-34  Score=298.72  Aligned_cols=250  Identities=23%  Similarity=0.301  Sum_probs=202.6

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      .+.+.||+|++|.||++... .+++.+++|.+........+.+.+|++++++++|+||+++++++.+....+++|||+++
T Consensus         6 ~~~~~l~~g~~~~v~~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~   84 (262)
T cd06613           6 ELIQRIGSGTYGDVYKARDI-ATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGG   84 (262)
T ss_pred             EEEEEecCCCceEEEEeEec-CCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCC
Confidence            45578999999999999764 34568999998876555678899999999999999999999999999999999999999


Q ss_pred             CCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          584 GTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       584 gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      ++|.+++... ..+++..+..++.|++.||+|||+.   +|+|+||+|+||++++++.+||+|||.+....... .....
T Consensus        85 ~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-~~~~~  160 (262)
T cd06613          85 GSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI-AKRKS  160 (262)
T ss_pred             CcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhhh-hcccc
Confidence            9999999776 6789999999999999999999998   99999999999999999999999999998654322 12223


Q ss_pred             ccccCCcccccccccC---CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          663 IRGTKGYVAPEWFRNM---PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~---~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      ..++..|+|||.+...   .++.++||||||+++|||++|+.||...........   ...     ..   +  ......
T Consensus       161 ~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~---~~~-----~~---~--~~~~~~  227 (262)
T cd06613         161 FIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFL---ISK-----SN---F--PPPKLK  227 (262)
T ss_pred             ccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHh-----cc---C--CCcccc
Confidence            4578899999999776   889999999999999999999999865432111000   000     00   0  000011


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .....+..+.+++.+||+.+|.+||++++|+.
T Consensus       228 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         228 DKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             chhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            12345667899999999999999999999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=3.2e-34  Score=299.21  Aligned_cols=245  Identities=25%  Similarity=0.345  Sum_probs=199.4

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc-----ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-----QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-----~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      ..+.||+|++|.||+|... .+++.|++|.+....     .+..+.+.+|+.++++++|+||+++++++..+...++|+|
T Consensus         4 ~~~~ig~g~~~~vy~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e   82 (258)
T cd06632           4 KGELLGSGSFGSVYEGLNL-DDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLE   82 (258)
T ss_pred             ccceeeecCCceEEEEEEc-CCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEE
Confidence            4567999999999999764 346789999886533     2245678999999999999999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      |+++++|.+++.+...+++..+..++.||++||+|||+.   +++|+||+|+||+++.++.+||+|||++.......  .
T Consensus        83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~--~  157 (258)
T cd06632          83 LVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS--F  157 (258)
T ss_pred             ecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceeccccc--c
Confidence            999999999998777789999999999999999999998   99999999999999999999999999988754332  2


Q ss_pred             cccccccCCcccccccccCC-CCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          660 NTAIRGTKGYVAPEWFRNMP-ITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~-~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      .....++..|+|||.+.... ++.++|+||||+++|+|++|+.||........   ....             .......
T Consensus       158 ~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~---~~~~-------------~~~~~~~  221 (258)
T cd06632         158 AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAA---VFKI-------------GRSKELP  221 (258)
T ss_pred             ccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHH---HHHH-------------HhcccCC
Confidence            23455788999999987766 89999999999999999999999865431100   0000             0000011


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ..+......+.+++.+||+.+|++||+++++++
T Consensus       222 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         222 PIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE  254 (258)
T ss_pred             CcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence            122234567788999999999999999999987

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=3.7e-34  Score=298.44  Aligned_cols=247  Identities=23%  Similarity=0.334  Sum_probs=201.1

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.+.||+|++|.||++.... +++.+++|.+.....  .+++.+|++++++++|+||+++++++.+....++++||++
T Consensus         5 y~~~~~i~~g~~~~v~~~~~~~-~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~   81 (256)
T cd06612           5 FDILEKLGEGSYGSVYKAIHKE-TGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCG   81 (256)
T ss_pred             chhhhhhcCCCCeEEEEEEEcC-CCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCC
Confidence            4456789999999999997653 457899999875432  6789999999999999999999999999999999999999


Q ss_pred             CCCccccccC-CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          583 NGTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       583 ~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      +++|.+++.. ...+++..+..++.|++.||.|||+.   +++|+||+|+||++++++.+||+|||++........ ...
T Consensus        82 ~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~-~~~  157 (256)
T cd06612          82 AGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA-KRN  157 (256)
T ss_pred             CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccCcc-ccc
Confidence            9999999865 35789999999999999999999998   999999999999999999999999999987643321 222


Q ss_pred             cccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCC
Q 003836          662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN  741 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  741 (792)
                      ...++..|+|||.+.+..++.++||||||+++|||++|+.||............        ..       ........+
T Consensus       158 ~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~--------~~-------~~~~~~~~~  222 (256)
T cd06612         158 TVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMI--------PN-------KPPPTLSDP  222 (256)
T ss_pred             cccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhh--------cc-------CCCCCCCch
Confidence            344788999999999889999999999999999999999998654221110000        00       000001112


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          742 VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       742 ~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ......+.+++.+||+.+|++|||++||++
T Consensus       223 ~~~~~~~~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         223 EKWSPEFNDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             hhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence            234567889999999999999999999987

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=5.5e-34  Score=297.47  Aligned_cols=246  Identities=23%  Similarity=0.326  Sum_probs=198.0

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceecc-CCceEEEEEe
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDE-GQNRLLVYEF  580 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~-~~~~~lV~E~  580 (792)
                      .+.+.||+|++|.||+++.. .+++.+++|++....  ....+.+.+|++++++++|+|++++++.+.. ....++||||
T Consensus         3 ~~~~~lg~g~~~~v~~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~   81 (257)
T cd08223           3 CFVRVVGKGSYGEVSLVRHR-TDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGF   81 (257)
T ss_pred             eEEEEecCCCCeEEEEEEEc-CCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecc
Confidence            45678999999999999764 446789999986432  2345678999999999999999999998764 4467899999


Q ss_pred             ccCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          581 MSNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       581 ~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      +++++|.+++...  ..+++.++..++.|++.||+|||+.   +|+|+||||+||+++.++.++|+|||++........ 
T Consensus        82 ~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~-  157 (257)
T cd08223          82 CEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD-  157 (257)
T ss_pred             cCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEecccCC-
Confidence            9999999998753  4589999999999999999999998   999999999999999999999999999987643322 


Q ss_pred             ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          659 TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      ......+++.|+|||.+.+..++.++||||||++++||++|+.||........       ...         +... ...
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~-------~~~---------~~~~-~~~  220 (257)
T cd08223         158 MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSL-------VYR---------IIEG-KLP  220 (257)
T ss_pred             ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH-------HHH---------HHhc-CCC
Confidence            22344588999999999999999999999999999999999999864321100       000         0000 011


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ..+......+.+++.+|++.+|++||++.++++
T Consensus       221 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  253 (257)
T cd08223         221 PMPKDYSPELGELIATMLSKRPEKRPSVKSILR  253 (257)
T ss_pred             CCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            123345577899999999999999999999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=4.3e-34  Score=301.17  Aligned_cols=252  Identities=23%  Similarity=0.372  Sum_probs=195.7

Q ss_pred             hhhhcCccccceEEEeeecC--CCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCC------ce
Q 003836          505 FKEELGRGAFGTVYKGFVNM--GSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQ------NR  574 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~--~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~------~~  574 (792)
                      +.+.||+|+||.||+|.+..  +.++.+|||++....  ....+++.+|++++++++||||+++++++...+      ..
T Consensus         3 ~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~   82 (273)
T cd05074           3 LGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIP   82 (273)
T ss_pred             chhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccce
Confidence            45689999999999997643  346789999987532  234567899999999999999999999886542      24


Q ss_pred             EEEEEeccCCCccccccCC------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCC
Q 003836          575 LLVYEFMSNGTVASFLFGD------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGL  648 (792)
Q Consensus       575 ~lV~E~~~~gsL~~~l~~~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~  648 (792)
                      ++++||+++|+|..++...      ..+++....+++.||+.||+|||+.   +|+|+||||+||++++++.+||+|||+
T Consensus        83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg~  159 (273)
T cd05074          83 MVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADFGL  159 (273)
T ss_pred             EEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcccc
Confidence            7889999999998887422      2468888999999999999999998   999999999999999999999999999


Q ss_pred             CccccCCCCC-ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhccc
Q 003836          649 AKLLTLDQSH-TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQER  726 (792)
Q Consensus       649 a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~  726 (792)
                      ++........ ......+++.|++||.+....++.++||||||+++|||++ |+.||.......    +..+    ....
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~----~~~~----~~~~  231 (273)
T cd05074         160 SKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSE----IYNY----LIKG  231 (273)
T ss_pred             cccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHH----HHHH----HHcC
Confidence            9876433221 1122335678999999998889999999999999999999 778875432210    0000    0000


Q ss_pred             chhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          727 TLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       727 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                               .....+...+..+.+++.+||+.+|++||++.|+++.|+++
T Consensus       232 ---------~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         232 ---------NRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             ---------CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence                     00011123456889999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=3e-34  Score=306.40  Aligned_cols=248  Identities=24%  Similarity=0.332  Sum_probs=200.5

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.+.||+|++|.||++.. ..+++.||+|.+........+.+.+|+.+++.++|+||+++++++..++..++||||++
T Consensus        21 y~~~~~lg~g~~g~v~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~   99 (297)
T cd06656          21 YTRFEKIGQGASGTVYTAID-IATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA   99 (297)
T ss_pred             ceeeeeeccCCCeEEEEEEE-CCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccC
Confidence            34557899999999999964 34567899999976555566778999999999999999999999999999999999999


Q ss_pred             CCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          583 NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       583 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      +++|.+++.+ ..+++.++..++.|++.||.|||+.   +++|+||||+|||++.++.+||+|||++......... ...
T Consensus       100 ~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~-~~~  174 (297)
T cd06656         100 GGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RST  174 (297)
T ss_pred             CCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccCCccC-cCc
Confidence            9999999854 4578889999999999999999998   9999999999999999999999999998765433221 223


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCH
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV  742 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  742 (792)
                      ..+++.|+|||.+.+..++.++|||||||++|++++|+.||...........               ...........+.
T Consensus       175 ~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~---------------~~~~~~~~~~~~~  239 (297)
T cd06656         175 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL---------------IATNGTPELQNPE  239 (297)
T ss_pred             ccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee---------------eccCCCCCCCCcc
Confidence            4578899999999988899999999999999999999999965322110000               0000000011122


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          743 TMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       743 ~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .....+.+++.+||+.+|++||+++++++
T Consensus       240 ~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (297)
T cd06656         240 RLSAVFRDFLNRCLEMDVDRRGSAKELLQ  268 (297)
T ss_pred             ccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            34566788999999999999999999998

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=3.6e-34  Score=320.14  Aligned_cols=257  Identities=20%  Similarity=0.216  Sum_probs=191.1

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      .+.+.||+|+||.||++... ..++.||||...      ...+.+|++++++++|+|||++++++..++..++|||++. 
T Consensus       172 ~i~~~Lg~G~~G~Vy~a~~~-~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-  243 (461)
T PHA03211        172 AIHRALTPGSEGCVFESSHP-DYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-  243 (461)
T ss_pred             EEEEEEccCCCeEEEEEEEC-CCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-
Confidence            34578999999999999765 446789999642      2346789999999999999999999999999999999995 


Q ss_pred             CCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC-ccc
Q 003836          584 GTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH-TNT  661 (792)
Q Consensus       584 gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~-~~~  661 (792)
                      ++|.+++... ..+++..+.+|+.||++||.|||++   +|+||||||+||||+.++.+||+|||+++........ ...
T Consensus       244 ~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~  320 (461)
T PHA03211        244 SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHY  320 (461)
T ss_pred             CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceeccccccccccc
Confidence            6888887654 5689999999999999999999998   9999999999999999999999999999876433222 122


Q ss_pred             cccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhh-hh---hhhHHHHHHH-h-----hcc---cch
Q 003836          662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISK-VD---KAILTDWAYD-R-----YQE---RTL  728 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~-~~---~~~~~~~~~~-~-----~~~---~~~  728 (792)
                      ...||+.|+|||++.+..++.++|||||||+||||++|..++...... ..   ...+...... .     +..   ..+
T Consensus       321 ~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l  400 (461)
T PHA03211        321 GIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRL  400 (461)
T ss_pred             ccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHH
Confidence            456999999999999999999999999999999999988765322110 00   0000000000 0     000   000


Q ss_pred             h-Hhhhc---hhccc--C-----CHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          729 E-ALVEN---DLEAM--N-----NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       729 ~-~~~~~---~~~~~--~-----~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      . .+...   .....  .     .......+.+|+.+||+.||.+|||+.|+++
T Consensus       401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~  454 (461)
T PHA03211        401 VSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLR  454 (461)
T ss_pred             HHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhh
Confidence            0 00000   00000  0     0012346888999999999999999999998

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=4.2e-34  Score=308.28  Aligned_cols=194  Identities=21%  Similarity=0.339  Sum_probs=158.7

Q ss_pred             hhcCccccceEEEeeecC-CCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceec--cCCceEEEEEeccC
Q 003836          507 EELGRGAFGTVYKGFVNM-GSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCD--EGQNRLLVYEFMSN  583 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~--~~~~~~lV~E~~~~  583 (792)
                      .+||+|+||+||+|.... ..+..+|+|.+...  .....+.+|++++++++||||+++++++.  .....++|+||+++
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~   84 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGT--GISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH   84 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCC--CCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence            469999999999998643 34578999998653  23356889999999999999999999884  45578899999875


Q ss_pred             CCccccccC---------CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEE----cCCCCeEEeecCCCc
Q 003836          584 GTVASFLFG---------DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILL----DDHYNARISDFGLAK  650 (792)
Q Consensus       584 gsL~~~l~~---------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl----~~~~~~kl~Dfg~a~  650 (792)
                       +|.+++..         ...+++..+..++.||+.||.|||+.   +|+||||||+|||+    +.++.+||+|||+++
T Consensus        85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~  160 (317)
T cd07867          85 -DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFAR  160 (317)
T ss_pred             -cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence             66666532         12478888999999999999999998   99999999999999    566799999999998


Q ss_pred             cccCCCCC--ccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcc
Q 003836          651 LLTLDQSH--TNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNE  706 (792)
Q Consensus       651 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~  706 (792)
                      ........  ......+|+.|+|||.+.+ ..++.++|||||||++|||+||+.||...
T Consensus       161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~  219 (317)
T cd07867         161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             ccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence            76433221  2234568999999999876 45899999999999999999999999643

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=5.4e-34  Score=300.30  Aligned_cols=250  Identities=24%  Similarity=0.384  Sum_probs=196.8

Q ss_pred             hhhcCccccceEEEeeecCCCceEEEEEEccccccc----------chHHHHHHHHHhcccCCCCcccccceeccCCceE
Q 003836          506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD----------SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRL  575 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~----------~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~  575 (792)
                      .+.||+|++|.||+|... .+++.+|+|.++.....          ..+.+.+|+.++++++|+|++++++++...+..+
T Consensus         6 ~~~lg~g~~~~vy~~~~~-~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (272)
T cd06629           6 GELIGKGTYGRVYLALNV-TTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYLS   84 (272)
T ss_pred             cceecccCceEEEEEeec-CCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCceE
Confidence            467999999999999653 45678999987532111          1246788999999999999999999999999999


Q ss_pred             EEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCC
Q 003836          576 LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD  655 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~  655 (792)
                      +||||+++++|.+++.+...+++..+..++.||+.||.|||+.   +++|+||+|+||+++.++.+||+|||+++.....
T Consensus        85 lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~  161 (272)
T cd06629          85 IFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGISKKSDDI  161 (272)
T ss_pred             EEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeecccccccccc
Confidence            9999999999999998877889999999999999999999998   9999999999999999999999999999865432


Q ss_pred             CCC-ccccccccCCcccccccccCC--CCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhh
Q 003836          656 QSH-TNTAIRGTKGYVAPEWFRNMP--ITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALV  732 (792)
Q Consensus       656 ~~~-~~~~~~gt~~y~aPE~~~~~~--~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  732 (792)
                      ... ......++..|+|||.+....  ++.++||||||+++||+++|..||.........       ..... ...    
T Consensus       162 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~-------~~~~~-~~~----  229 (272)
T cd06629         162 YDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAM-------FKLGN-KRS----  229 (272)
T ss_pred             ccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHH-------HHhhc-ccc----
Confidence            221 123345788999999987654  889999999999999999999998543221100       00000 000    


Q ss_pred             hchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          733 ENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       733 ~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ............+..+.+++.+||+.+|++||++++|++
T Consensus       230 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (272)
T cd06629         230 APPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ  268 (272)
T ss_pred             CCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence            000011111234578889999999999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=3.4e-34  Score=298.81  Aligned_cols=247  Identities=21%  Similarity=0.282  Sum_probs=198.9

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccc-cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      .+.+.||+|+||.||++... .+++.+|+|.++.. .....+.+.+|+.++++++|+||+++++.+.++...++||||++
T Consensus         3 ~~~~~lg~g~~g~v~~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   81 (255)
T cd08219           3 NVLRVVGEGSFGRALLVQHV-NSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCD   81 (255)
T ss_pred             eEEEEeeccCCeEEEEEEEc-CCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCC
Confidence            34578999999999999754 45678999988643 23345678899999999999999999999999999999999999


Q ss_pred             CCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          583 NGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       583 ~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +++|.+++...  ..+++.....++.||+.||.|||+.   +|+|+||||+||++++++.++|+|||.++....... ..
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~-~~  157 (255)
T cd08219          82 GGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA-YA  157 (255)
T ss_pred             CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeeccccc-cc
Confidence            99999988643  4578899999999999999999998   999999999999999999999999999986643222 22


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ....+++.|+|||.+.+..++.++||||||+++|+|++|+.||........   .    . ......         ....
T Consensus       158 ~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~---~----~-~~~~~~---------~~~~  220 (255)
T cd08219         158 CTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL---I----L-KVCQGS---------YKPL  220 (255)
T ss_pred             ccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH---H----H-HHhcCC---------CCCC
Confidence            234588899999999988999999999999999999999999975422110   0    0 000000         1111


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      +...+..+.+++.+||+.+|++||++.+|+..
T Consensus       221 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         221 PSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             CcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            22344568899999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=5.9e-34  Score=297.13  Aligned_cols=247  Identities=22%  Similarity=0.318  Sum_probs=201.1

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccc--cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV--FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .+.+.||.|+||.||.++.. .+++.+++|++...  .....+++.+|++++++++|+||+++++++.+.+..+++|||+
T Consensus         3 ~~~~~ig~g~~g~v~~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~   81 (256)
T cd08221           3 IPIRVLGKGAFGEATLYRRT-EDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYA   81 (256)
T ss_pred             eEeeEecccCCceEEEEEEc-CCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEec
Confidence            45678999999999988754 45678999987643  2344567899999999999999999999999999999999999


Q ss_pred             cCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          582 SNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       582 ~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      ++++|.+++...  ..+++.++..++.|+++||.|||+.   +++|+||+|+||++++++.+||+|||+++....... .
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~-~  157 (256)
T cd08221          82 NGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS-M  157 (256)
T ss_pred             CCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEcccccc-c
Confidence            999999999765  4578999999999999999999998   999999999999999999999999999987644332 2


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      .....+++.|+|||.+.+..++.++||||||+++|||++|+.||........       .         ..+..... ..
T Consensus       158 ~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~-------~---------~~~~~~~~-~~  220 (256)
T cd08221         158 AETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNL-------V---------VKIVQGNY-TP  220 (256)
T ss_pred             ccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHH-------H---------HHHHcCCC-CC
Confidence            2345589999999999888899999999999999999999999865322110       0         00000111 11


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .+.....++.+++.+||+.+|++||+++++++.
T Consensus       221 ~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~  253 (256)
T cd08221         221 VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ  253 (256)
T ss_pred             CccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence            123345678899999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=4.2e-34  Score=299.92  Aligned_cols=247  Identities=24%  Similarity=0.343  Sum_probs=198.0

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccccc------cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEE
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ------DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~------~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~  578 (792)
                      ..+.||+|+||.||+|...  +++.+|+|.+.....      .....+.+|++++++++|+||+++++++.+.+..++|+
T Consensus         4 ~~~~ig~g~~~~v~~~~~~--~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   81 (265)
T cd06631           4 KGEVLGKGAYGTVYCGLTN--QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFM   81 (265)
T ss_pred             ccceEeccCCeEEEEEEEc--CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEE
Confidence            3467999999999999753  456899998864321      12356889999999999999999999999999999999


Q ss_pred             EeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC--
Q 003836          579 EFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ--  656 (792)
Q Consensus       579 E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~--  656 (792)
                      ||+++++|.+++.+...+++..+..++.|++.||+|||+.   +|+|+||+|+||++++++.+||+|||+++......  
T Consensus        82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~  158 (265)
T cd06631          82 EFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLH  158 (265)
T ss_pred             ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhhhcccc
Confidence            9999999999998777788999999999999999999998   99999999999999999999999999988653211  


Q ss_pred             ---CCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhh
Q 003836          657 ---SHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVE  733 (792)
Q Consensus       657 ---~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  733 (792)
                         ........++..|+|||.+.+..++.++||||||++++||++|+.||............      . .        .
T Consensus       159 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~------~-~--------~  223 (265)
T cd06631         159 GTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYI------G-A--------H  223 (265)
T ss_pred             ccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHh------h-h--------c
Confidence               11122345889999999999989999999999999999999999999653221110000      0 0        0


Q ss_pred             chhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          734 NDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       734 ~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .......+.....++.+++.+||+.+|++||++.|+++
T Consensus       224 ~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         224 RGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             cCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            00011122234567889999999999999999999986

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=1.2e-33  Score=298.49  Aligned_cols=247  Identities=25%  Similarity=0.361  Sum_probs=201.3

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +...+.||.|+||.||+|... ..+..+|+|.+.... ......+.+|+.++++++|+||+++++++.++...++||||+
T Consensus         6 y~~~~~lg~g~~~~vy~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06640           6 FTKLERIGKGSFGEVFKGIDN-RTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             hhhhhhcccCCCeEEEEEEEc-cCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence            334577999999999999754 446789999887532 344567899999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      ++++|.+++.. ..+++.....++.|++.||+|||+.   +++|+||+|+||+++.++.++|+|||++........ ...
T Consensus        85 ~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~-~~~  159 (277)
T cd06640          85 GGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI-KRN  159 (277)
T ss_pred             CCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCCcc-ccc
Confidence            99999999864 4678889999999999999999998   999999999999999999999999999987643322 222


Q ss_pred             cccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCC
Q 003836          662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN  741 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  741 (792)
                      ...++..|+|||.+.+..++.++||||||+++|||++|+.|+.........                 ..+.........
T Consensus       160 ~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~-----------------~~~~~~~~~~~~  222 (277)
T cd06640         160 TFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVL-----------------FLIPKNNPPTLT  222 (277)
T ss_pred             cccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHh-----------------hhhhcCCCCCCc
Confidence            345788999999998888999999999999999999999998654321100                 000111112233


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          742 VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       742 ~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ...+..+.+++.+||+.+|++||+++++++.
T Consensus       223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         223 GEFSKPFKEFIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             hhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence            4566788999999999999999999999874

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=5.4e-34  Score=297.13  Aligned_cols=243  Identities=29%  Similarity=0.442  Sum_probs=194.9

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.+.||+|+||.||++..   .++.+|+|+++..  .....+.+|+.++++++|+|++++++++... ..++||||++
T Consensus         8 ~~~~~~lg~g~~g~v~~~~~---~~~~~~iK~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~   81 (254)
T cd05083           8 LTLGEIIGEGEFGAVLQGEY---TGQKVAVKNIKCD--VTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS   81 (254)
T ss_pred             ceeeeeeccCCCCceEeccc---CCCceEEEeecCc--chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence            45567899999999999864   3567999998653  2346789999999999999999999998764 4799999999


Q ss_pred             CCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          583 NGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       583 ~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +++|.+++...  ..+++..+..++.|++.||.|||+.   +++||||||+||+++.++.+||+|||+++......    
T Consensus        82 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~----  154 (254)
T cd05083          82 KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV----  154 (254)
T ss_pred             CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceeccccC----
Confidence            99999999754  3578899999999999999999998   99999999999999999999999999987643221    


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      .....+..|+|||.+.+..++.++||||||+++|||++ |+.||.........        .         .+.......
T Consensus       155 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~--------~---------~~~~~~~~~  217 (254)
T cd05083         155 DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVK--------E---------CVEKGYRME  217 (254)
T ss_pred             CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHH--------H---------HHhCCCCCC
Confidence            12234568999999998899999999999999999998 88888644221100        0         001111111


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhcc
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEG  775 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~  775 (792)
                      .+...+..+.+++.+||+.+|++||+++++++.|++
T Consensus       218 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         218 PPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence            122345678899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=6.2e-34  Score=304.14  Aligned_cols=262  Identities=22%  Similarity=0.246  Sum_probs=197.1

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccccc-----chHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD-----SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~-----~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +.+.||+|++|.||+|... .+++.|++|++......     ....+.+|++++++++|+||+++++++.+.+..++|||
T Consensus         4 ~~~~lg~g~~~~vy~~~~~-~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e   82 (298)
T cd07841           4 KGKKLGEGTYAVVYKARDK-ETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFE   82 (298)
T ss_pred             eeeeeeeccccEEEEEEEC-CCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEc
Confidence            4567999999999999754 34678999998754322     24567789999999999999999999999999999999


Q ss_pred             eccCCCccccccCCC-CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          580 FMSNGTVASFLFGDS-KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~-~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      |+ +++|.+++.... .+++..+..++.||++||+|||+.   +|+|+||+|+||+++.++.+||+|||+++....... 
T Consensus        83 ~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~-  157 (298)
T cd07841          83 FM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNR-  157 (298)
T ss_pred             cc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeeccCCCc-
Confidence            99 899999997765 789999999999999999999998   999999999999999999999999999987643322 


Q ss_pred             ccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHH----HHhhc-ccchhHhh
Q 003836          659 TNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWA----YDRYQ-ERTLEALV  732 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~  732 (792)
                      ......+++.|+|||.+.+ ..++.++|||||||+++||++|..+|................    ...+. ........
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (298)
T cd07841         158 KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYV  237 (298)
T ss_pred             cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccc
Confidence            1222346788999998854 467899999999999999999977775433211110000000    00000 00000000


Q ss_pred             hchhccc-----CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          733 ENDLEAM-----NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       733 ~~~~~~~-----~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .......     .....+..+.+++.+||+.+|++|||+.|++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~  282 (298)
T cd07841         238 EFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH  282 (298)
T ss_pred             cccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            0000000     112335788999999999999999999999985

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.2e-33  Score=300.04  Aligned_cols=250  Identities=24%  Similarity=0.339  Sum_probs=198.4

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccc-cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +++.+.||+|+||.||++... ..++.+|+|.+... .......+.+|+.++++++|+||+++++.+...+..++||||+
T Consensus         3 ~~~~~~ig~g~~g~v~~~~~~-~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (286)
T cd06622           3 IEVLDELGKGNYGSVYKVLHR-PTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM   81 (286)
T ss_pred             hhhhhhhcccCCeEEEEEEEc-CCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence            456688999999999999754 45678999988653 2333467899999999999999999999999999999999999


Q ss_pred             cCCCccccccCC---CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          582 SNGTVASFLFGD---SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       582 ~~gsL~~~l~~~---~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      ++++|..++...   ..+++..+..++.|++.||.|||+.  .+|+|+||||+||+++.++.+||+|||++......   
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---  156 (286)
T cd06622          82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS---  156 (286)
T ss_pred             CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC---
Confidence            999999998763   3689999999999999999999974  38999999999999999999999999999765322   


Q ss_pred             ccccccccCCcccccccccC------CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhh
Q 003836          659 TNTAIRGTKGYVAPEWFRNM------PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALV  732 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~------~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  732 (792)
                      ......+++.|+|||.+.+.      .++.++|||||||++|||++|+.||..........             .+..+.
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~-------------~~~~~~  223 (286)
T cd06622         157 LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFA-------------QLSAIV  223 (286)
T ss_pred             ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHH-------------HHHHHh
Confidence            12233578899999998554      35889999999999999999999996532211000             011111


Q ss_pred             hchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          733 ENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       733 ~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .. .....+.....++.+++.+||+.+|++||+++++++.
T Consensus       224 ~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~  262 (286)
T cd06622         224 DG-DPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH  262 (286)
T ss_pred             hc-CCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence            11 1112233466778899999999999999999999974

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.2e-33  Score=289.31  Aligned_cols=248  Identities=23%  Similarity=0.284  Sum_probs=206.0

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +.+.||.|.-|+||++.+. ++....|+|++.+..   +....+.+.|-+||+.++||.++.|++.++.++..+||||||
T Consensus        81 llk~LG~GdiG~VyL~~l~-~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyC  159 (459)
T KOG0610|consen   81 LLKRLGCGDIGTVYLVELR-GTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYC  159 (459)
T ss_pred             HHHHcCCCCceeEEEEEec-CCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecC
Confidence            3467999999999999875 455899999998743   344567788999999999999999999999999999999999


Q ss_pred             cCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCC----
Q 003836          582 SNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD----  655 (792)
Q Consensus       582 ~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~----  655 (792)
                      +||+|...+++.  +.+++..+.-++..|+-||+|||-.   |||.|||||+||||.++|++-|+||.++......    
T Consensus       160 pGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~  236 (459)
T KOG0610|consen  160 PGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLV  236 (459)
T ss_pred             CCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCCCCeee
Confidence            999999999765  5789999999999999999999998   9999999999999999999999999987543110    


Q ss_pred             ------------------------------CC---------------------CccccccccCCcccccccccCCCCccc
Q 003836          656 ------------------------------QS---------------------HTNTAIRGTKGYVAPEWFRNMPITVKV  684 (792)
Q Consensus       656 ------------------------------~~---------------------~~~~~~~gt~~y~aPE~~~~~~~~~k~  684 (792)
                                                    ..                     ......+||-.|+|||++.+...+.++
T Consensus       237 ~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAV  316 (459)
T KOG0610|consen  237 KSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAV  316 (459)
T ss_pred             ccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchh
Confidence                                          00                     001124699999999999999999999


Q ss_pred             ceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCC
Q 003836          685 DVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRP  764 (792)
Q Consensus       685 DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RP  764 (792)
                      |.|+|||+||||+.|..||.......                .+..++.+.+.-...++.+..+.+||+..|..||++|.
T Consensus       317 DWWtfGIflYEmLyG~TPFKG~~~~~----------------Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRl  380 (459)
T KOG0610|consen  317 DWWTFGIFLYEMLYGTTPFKGSNNKE----------------TLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRL  380 (459)
T ss_pred             hHHHHHHHHHHHHhCCCCcCCCCchh----------------hHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhh
Confidence            99999999999999999997654321                12333444444444446778899999999999999999


Q ss_pred             C----HHhHHHH
Q 003836          765 T----MRKVTQM  772 (792)
Q Consensus       765 s----~~evl~~  772 (792)
                      -    +.||.+.
T Consensus       381 g~~rGA~eIK~H  392 (459)
T KOG0610|consen  381 GSKRGAAEIKRH  392 (459)
T ss_pred             ccccchHHhhcC
Confidence            8    8888765

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=5.7e-34  Score=303.42  Aligned_cols=245  Identities=23%  Similarity=0.355  Sum_probs=198.0

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCCCc
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTV  586 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~gsL  586 (792)
                      ..||+|+||.||++... .++..+|+|++........+.+.+|+.++++++|+||+++++.+..++..++||||+++++|
T Consensus        28 ~~lg~g~~g~v~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L  106 (292)
T cd06658          28 IKIGEGSTGIVCIATEK-HTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL  106 (292)
T ss_pred             hcccCCCCeEEEEEEEC-CCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcH
Confidence            56999999999999654 45678999998765555667799999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccccccc
Q 003836          587 ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGT  666 (792)
Q Consensus       587 ~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt  666 (792)
                      .+++.. ..+++..+..++.||+.||+|||+.   +|+||||||+||++++++.+||+|||++........ ......++
T Consensus       107 ~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~-~~~~~~~~  181 (292)
T cd06658         107 TDIVTH-TRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP-KRKSLVGT  181 (292)
T ss_pred             HHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc-cCceeecC
Confidence            998854 4588999999999999999999998   999999999999999999999999999876533222 22234588


Q ss_pred             CCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHHH
Q 003836          667 KGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLH  746 (792)
Q Consensus       667 ~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  746 (792)
                      ..|+|||.+.+..++.++||||||+++|||++|+.||........   +..          +..........  ......
T Consensus       182 ~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~---~~~----------~~~~~~~~~~~--~~~~~~  246 (292)
T cd06658         182 PYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA---MRR----------IRDNLPPRVKD--SHKVSS  246 (292)
T ss_pred             ccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHH----------HHhcCCCcccc--ccccCH
Confidence            999999999888999999999999999999999999865322110   000          00001111111  112345


Q ss_pred             HHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          747 RFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       747 ~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .+.+++.+|++.+|.+|||++|+++.
T Consensus       247 ~~~~li~~~l~~~P~~Rpt~~~il~~  272 (292)
T cd06658         247 VLRGFLDLMLVREPSQRATAQELLQH  272 (292)
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhhC
Confidence            67889999999999999999999974

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=4.1e-34  Score=299.90  Aligned_cols=249  Identities=25%  Similarity=0.396  Sum_probs=201.0

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      .+.+.||+|++|.||++... .+++.+++|++.... ....+++.+|++++++++|+||+++++.+......++|+||++
T Consensus         4 ~~~~~ig~g~~~~v~~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   82 (265)
T cd06605           4 EYLGELGAGNSGVVSKVLHR-PTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMD   82 (265)
T ss_pred             hHHHHhcCCCCeEEEEEEEc-CCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecC
Confidence            35678999999999999764 456789999987643 3455678999999999999999999999999999999999999


Q ss_pred             CCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhh-ccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          583 NGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHE-ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       583 ~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +++|.+++... ..+++..+.+++.|++.||+|||+ .   +++|+||||+||++++++.+||+|||.+.........  
T Consensus        83 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~--  157 (265)
T cd06605          83 GGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAK--  157 (265)
T ss_pred             CCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhh--
Confidence            99999999776 678899999999999999999999 7   9999999999999999999999999998765432221  


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                       ...++..|+|||.+.+..++.++||||||+++++|++|+.||..........  ...         +....... ....
T Consensus       158 -~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~--~~~---------~~~~~~~~-~~~~  224 (265)
T cd06605         158 -TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGI--FEL---------LQYIVNEP-PPRL  224 (265)
T ss_pred             -cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccH--HHH---------HHHHhcCC-CCCC
Confidence             1557889999999998899999999999999999999999986542211100  000         01111111 1111


Q ss_pred             CHH-HHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          741 NVT-MLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       741 ~~~-~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      +.. ....+.+++.+||..+|++|||+.+++.
T Consensus       225 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  256 (265)
T cd06605         225 PSGKFSPDFQDFVNLCLIKDPRERPSYKELLE  256 (265)
T ss_pred             ChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence            112 5667889999999999999999999987

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=7.3e-34  Score=312.50  Aligned_cols=260  Identities=24%  Similarity=0.263  Sum_probs=192.7

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccC------Cce
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEG------QNR  574 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~------~~~  574 (792)
                      +.+.+.||+|+||.||++... ..++.+|||++....  ....+.+.+|+.+++.++|+||+++++++...      ...
T Consensus        26 y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~  104 (364)
T cd07875          26 YQNLKPIGSGAQGIVCAAYDA-ILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDV  104 (364)
T ss_pred             eeEEEEeecCCCeEEEEEEEC-CCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeE
Confidence            444578999999999999643 456789999987532  23456788999999999999999999987543      357


Q ss_pred             EEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccC
Q 003836          575 LLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL  654 (792)
Q Consensus       575 ~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~  654 (792)
                      ++||||+++ +|.+++.  ..+++..+..++.|++.||+|||++   +|+||||||+|||++.++.+||+|||+++....
T Consensus       105 ~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~  178 (364)
T cd07875         105 YIVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  178 (364)
T ss_pred             EEEEeCCCC-CHHHHHH--hcCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCCCccccCC
Confidence            999999976 6666664  3477888999999999999999998   999999999999999999999999999986532


Q ss_pred             CCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH-------HHHhhcccc
Q 003836          655 DQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW-------AYDRYQERT  727 (792)
Q Consensus       655 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~-------~~~~~~~~~  727 (792)
                      .  .......+|+.|+|||.+.+..++.++|||||||++|||++|+.||...............       ..... ...
T Consensus       179 ~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  255 (364)
T cd07875         179 S--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL-QPT  255 (364)
T ss_pred             C--CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhh-hHH
Confidence            2  2223456899999999999999999999999999999999999999654322110000000       00000 000


Q ss_pred             hhHhhhch--------------h----cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          728 LEALVEND--------------L----EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       728 ~~~~~~~~--------------~----~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ........              .    ...........+.+++.+||+.||++|||+.|+++.
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h  318 (364)
T cd07875         256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  318 (364)
T ss_pred             HHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence            00000000              0    000111234578899999999999999999999985

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.6e-34  Score=301.61  Aligned_cols=250  Identities=22%  Similarity=0.302  Sum_probs=200.6

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.+.||.|++|.||++.... +++.+|+|.+........+.+.+|++++++++|+||+++++.+......++||||++
T Consensus         7 ~~i~~~l~~g~~~~v~~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (280)
T cd06611           7 WEIIGELGDGAFGKVYKAQHKE-TGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCD   85 (280)
T ss_pred             HHHHHHhcCCCCceEEEEEEcC-CCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccC
Confidence            4566889999999999997653 567899999876655566789999999999999999999999999999999999999


Q ss_pred             CCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          583 NGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       583 ~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      +++|.+++... ..+++..+.+++.|++.||.|||+.   +|+|+||||+||+++.++.++|+|||++........ ...
T Consensus        86 ~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~-~~~  161 (280)
T cd06611          86 GGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ-KRD  161 (280)
T ss_pred             CCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhccccc-ccc
Confidence            99999998764 5689999999999999999999998   999999999999999999999999999876533221 222


Q ss_pred             cccccCCcccccccc-----cCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          662 AIRGTKGYVAPEWFR-----NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~-----~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                      ...+++.|+|||.+.     ...++.++||||||+++|||++|+.||........   ....     .....     +  
T Consensus       162 ~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~---~~~~-----~~~~~-----~--  226 (280)
T cd06611         162 TFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRV---LLKI-----LKSEP-----P--  226 (280)
T ss_pred             eeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHH---HHHH-----hcCCC-----C--
Confidence            345889999999874     34578899999999999999999999865422110   0000     00000     0  


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ....+.....++.+++..||+.+|++||++.++++.
T Consensus       227 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         227 TLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             CcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence            001122344578899999999999999999999873

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=8e-34  Score=297.39  Aligned_cols=250  Identities=25%  Similarity=0.360  Sum_probs=200.8

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccccc--chHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~--~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      ...+.||+|++|.||+|... .+++.+++|.+......  ..+.+.+|+.++++++|+||+++++++...+..++|+||+
T Consensus         3 ~~~~~lg~G~~~~v~~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (264)
T cd06626           3 QRGNKIGGGTFGKVYTAVNL-DTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYC   81 (264)
T ss_pred             eeeeEeecCCCcEEEEEEEC-CCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecC
Confidence            34578999999999999754 34678999998765442  5678999999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      ++++|.+++.....+++..+..++.|+++||.|||+.   +|+|+||+|+||++++++.+||+|||++............
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~  158 (264)
T cd06626          82 SGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGE  158 (264)
T ss_pred             CCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccc
Confidence            9999999998877789999999999999999999998   9999999999999999999999999999876543332211


Q ss_pred             ---cccccCCcccccccccCC---CCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          662 ---AIRGTKGYVAPEWFRNMP---ITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       662 ---~~~gt~~y~aPE~~~~~~---~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                         ...+++.|+|||.+....   ++.++||||||++++|+++|+.||.........      ......        ...
T Consensus       159 ~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~------~~~~~~--------~~~  224 (264)
T cd06626         159 EVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQI------MFHVGA--------GHK  224 (264)
T ss_pred             cccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHH------HHHHhc--------CCC
Confidence               345788999999998766   899999999999999999999999643211110      000000        000


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ............+.+++.+||+.+|.+||++++++.
T Consensus       225 ~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         225 PPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             CCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            000011123567789999999999999999999886

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9e-35  Score=308.11  Aligned_cols=256  Identities=22%  Similarity=0.366  Sum_probs=209.0

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      ++.-.||-|+||.||+++-. .++...|.|.+........+++.-||++|+..+||+||+|++.|...+.++++.|||.|
T Consensus        35 eIiGELGDGAFGKVyKA~nk-et~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~G  113 (1187)
T KOG0579|consen   35 EIIGELGDGAFGKVYKAVNK-ETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGG  113 (1187)
T ss_pred             HHHhhhcCccchhhhhhhcc-cchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCC
Confidence            44567999999999999643 55556788888887777888999999999999999999999999999999999999999


Q ss_pred             CCccccccC-CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          584 GTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       584 gsL~~~l~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      |-.+..+-. ...+.+.++.-++.|++.||.|||++   .|||||||+.|||++-+|.++|+|||++-..... ......
T Consensus       114 GAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t-~qkRDs  189 (1187)
T KOG0579|consen  114 GAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKST-RQKRDS  189 (1187)
T ss_pred             chHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchhH-Hhhhcc
Confidence            999998754 46789999999999999999999999   9999999999999999999999999998653322 122345


Q ss_pred             ccccCCcccccccc-----cCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch-h
Q 003836          663 IRGTKGYVAPEWFR-----NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND-L  736 (792)
Q Consensus       663 ~~gt~~y~aPE~~~-----~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  736 (792)
                      +.|||.|||||+..     ..+|+.++||||||+.|.||..+.+|.+.....  ..+              ..+.... .
T Consensus       190 FIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpM--RVl--------------lKiaKSePP  253 (1187)
T KOG0579|consen  190 FIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPM--RVL--------------LKIAKSEPP  253 (1187)
T ss_pred             ccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchH--HHH--------------HHHhhcCCC
Confidence            67999999999874     468999999999999999999999886543211  000              0111111 0


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCCCCCCCCCCCCCCC
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPIPPCPWTLNITS  792 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~~~p~~P~~~~~~~  792 (792)
                      ....+...+..+.+++..||..||..||++.++++            |||.+++.|
T Consensus       254 TLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~------------Hpfv~~~~S  297 (1187)
T KOG0579|consen  254 TLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK------------HPFVQNAPS  297 (1187)
T ss_pred             cccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh------------CcccccCCc
Confidence            11124456778899999999999999999999998            788877654

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=7.7e-34  Score=301.32  Aligned_cols=263  Identities=21%  Similarity=0.274  Sum_probs=199.4

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .+.+.||+|++|.||++... .+++.+|+|++....  ....+.+.+|+.++++++|+||+++++++..+...++||||+
T Consensus         4 ~~~~~l~~g~~~~v~~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~   82 (286)
T cd07847           4 EKLSKIGEGSYGVVFKCRNR-ETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYC   82 (286)
T ss_pred             eeeeeecccCCeEEEEEEEC-CCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEecc
Confidence            34578999999999999764 446789999886432  223467889999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      ++++|..++.....+++..+..++.||+.||+|||+.   +++|+||||+||+++.++.+||+|||++........ ...
T Consensus        83 ~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~  158 (286)
T cd07847          83 DHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD-DYT  158 (286)
T ss_pred             CccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCCcc-ccc
Confidence            9999998887767789999999999999999999998   999999999999999999999999999987644322 122


Q ss_pred             cccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHH-------Hhhcccc-hhHhh
Q 003836          662 AIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAY-------DRYQERT-LEALV  732 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~-~~~~~  732 (792)
                      ...++..|+|||.+.+ ..++.++||||||+++|||++|+.||.................       ..+.... .....
T Consensus       159 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (286)
T cd07847         159 DYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLS  238 (286)
T ss_pred             CcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccccccc
Confidence            3347889999999876 5688999999999999999999999965432211111000000       0000000 00000


Q ss_pred             hchhcccCC-----HHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          733 ENDLEAMNN-----VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       733 ~~~~~~~~~-----~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .+......+     ......+.+++.+||+.+|++||++.|++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         239 IPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             CCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence            000000000     123567889999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=3.8e-34  Score=313.70  Aligned_cols=260  Identities=24%  Similarity=0.280  Sum_probs=192.4

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccC------Cce
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEG------QNR  574 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~------~~~  574 (792)
                      +...+.||+|+||.||++.. ...++.+|||++....  ....+.+.+|+.+++.++|+||+++++++...      ...
T Consensus        19 y~~~~~lg~G~~g~V~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   97 (355)
T cd07874          19 YQNLKPIGSGAQGIVCAAYD-AVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDV   97 (355)
T ss_pred             eeEEEEeeecCCEEEEEEEe-cCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccccee
Confidence            33457899999999999964 3456789999987542  23346788999999999999999999988543      357


Q ss_pred             EEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccC
Q 003836          575 LLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL  654 (792)
Q Consensus       575 ~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~  654 (792)
                      ++||||+++ +|.+.+.  ..+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++....
T Consensus        98 ~lv~e~~~~-~l~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~  171 (355)
T cd07874          98 YLVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  171 (355)
T ss_pred             EEEhhhhcc-cHHHHHh--hcCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCcccccCCC
Confidence            999999976 5666553  3478888999999999999999998   999999999999999999999999999986532


Q ss_pred             CCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH-------HHHhhcccc
Q 003836          655 DQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW-------AYDRYQERT  727 (792)
Q Consensus       655 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~-------~~~~~~~~~  727 (792)
                      .  .......+|+.|+|||.+.+..++.++|||||||++|||++|+.||...............       ...... ..
T Consensus       172 ~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  248 (355)
T cd07874         172 S--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PT  248 (355)
T ss_pred             c--cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhc-HH
Confidence            2  2223456899999999999989999999999999999999999999654321110000000       000000 00


Q ss_pred             hhHhhhch----------------h--cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          728 LEALVEND----------------L--EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       728 ~~~~~~~~----------------~--~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ....++..                .  ...........+.+++.+||+.||++|||+.|+++.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h  311 (355)
T cd07874         249 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH  311 (355)
T ss_pred             HHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence            00000000                0  001112234678899999999999999999999985

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=9.7e-34  Score=297.20  Aligned_cols=246  Identities=20%  Similarity=0.279  Sum_probs=195.3

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc-----ccchHHHHHHHHHhcccCCCCcccccceeccC--CceEEE
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-----QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEG--QNRLLV  577 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-----~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~--~~~~lV  577 (792)
                      ..+.||+|+||.||++... .+++.||+|++....     ....+.+.+|+.++++++|+||+++++++.+.  ...++|
T Consensus         6 ~~~~l~~g~~g~v~~~~~~-~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v   84 (265)
T cd06652           6 LGKLLGQGAFGRVYLCYDA-DTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIF   84 (265)
T ss_pred             EeeEEecCCceEEEEEEEc-CCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEE
Confidence            3578999999999999754 556789999875321     12235788999999999999999999998764  467899


Q ss_pred             EEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC
Q 003836          578 YEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      |||+++++|.+++.....+++....+++.|++.||+|||+.   +++|+||||+||+++.++.+||+|||+++.......
T Consensus        85 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~  161 (265)
T cd06652          85 MEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICL  161 (265)
T ss_pred             EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCccccccccccc
Confidence            99999999999998777788999999999999999999998   999999999999999999999999999986543211


Q ss_pred             --CccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          658 --HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       658 --~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                        .......++..|+|||.+.+..++.++||||||+++|||++|+.||........                ........
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~----------------~~~~~~~~  225 (265)
T cd06652         162 SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAA----------------IFKIATQP  225 (265)
T ss_pred             cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHH----------------HHHHhcCC
Confidence              112234588899999999888899999999999999999999999864321110                00011111


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .....+......+.+++.+|+. +|++||+++||++
T Consensus       226 ~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~  260 (265)
T cd06652         226 TNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR  260 (265)
T ss_pred             CCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence            1222344556678889999985 8999999999987

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9.1e-35  Score=306.58  Aligned_cols=240  Identities=27%  Similarity=0.346  Sum_probs=198.5

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEccc---ccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNS---VFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~---~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      +.||.|+||.||-+.. ..+.+.||||++.-   .......++..|++.|++++|||++.+.|||..+...+||||||-|
T Consensus        32 rEIGHGSFGAVYfArd-~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYClG  110 (948)
T KOG0577|consen   32 REIGHGSFGAVYFARD-VRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCLG  110 (948)
T ss_pred             HHhcCCccceeEEeec-cCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHhc
Confidence            4699999999999964 45667999999863   3344567899999999999999999999999999999999999965


Q ss_pred             CCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          584 GTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       584 gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                       |-.+++.-. +++.+-.+..|..+.+.||+|||+.   +.||||||+.||||++.|.+||+|||.|.+..+     ...
T Consensus       111 -SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P-----Ans  181 (948)
T KOG0577|consen  111 -SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAP-----ANS  181 (948)
T ss_pred             -cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCc-----hhc
Confidence             777777543 6788999999999999999999999   999999999999999999999999999977543     334


Q ss_pred             ccccCCcccccccc---cCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          663 IRGTKGYVAPEWFR---NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       663 ~~gt~~y~aPE~~~---~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      ++|||.|||||++.   .++|+-|+||||||++..||...++|..++.....   +-..+             .....-.
T Consensus       182 FvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSA---LYHIA-------------QNesPtL  245 (948)
T KOG0577|consen  182 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA---LYHIA-------------QNESPTL  245 (948)
T ss_pred             ccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHH---HHHHH-------------hcCCCCC
Confidence            67999999999874   58999999999999999999999999866532111   00000             0111111


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ...+.+..+.+++..||+.-|.+|||.++++..
T Consensus       246 qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H  278 (948)
T KOG0577|consen  246 QSNEWSDYFRNFVDSCLQKIPQERPTSEELLKH  278 (948)
T ss_pred             CCchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence            245678889999999999999999999998874

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=1.3e-33  Score=309.77  Aligned_cols=261  Identities=24%  Similarity=0.273  Sum_probs=192.2

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCC------ce
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQ------NR  574 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~------~~  574 (792)
                      +...+.||+|+||.||++... .+++.+|+|++....  ......+.+|+.+++.++||||+++++++....      ..
T Consensus        23 y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~  101 (359)
T cd07876          23 YQQLKPIGSGAQGIVCAAFDT-VLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDV  101 (359)
T ss_pred             eEEEEEeecCCCEEEEEEEEc-CCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccccee
Confidence            445578999999999999653 556799999986532  334567889999999999999999999986443      57


Q ss_pred             EEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccC
Q 003836          575 LLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL  654 (792)
Q Consensus       575 ~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~  654 (792)
                      ++||||+++ +|...+.  ..+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++....
T Consensus       102 ~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~  175 (359)
T cd07876         102 YLVMELMDA-NLCQVIH--MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTACT  175 (359)
T ss_pred             EEEEeCCCc-CHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCCCcccccc
Confidence            999999976 5555553  3477888899999999999999998   999999999999999999999999999976432


Q ss_pred             CCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH---HHHhhc---ccch
Q 003836          655 DQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW---AYDRYQ---ERTL  728 (792)
Q Consensus       655 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~---~~~~~~---~~~~  728 (792)
                      .  .......+|+.|+|||.+.+..++.++|||||||++|||++|+.||...............   +...+.   ....
T Consensus       176 ~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (359)
T cd07876         176 N--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTV  253 (359)
T ss_pred             C--ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence            2  2223456899999999999999999999999999999999999999754321110000000   000000   0000


Q ss_pred             hHhhhchh------------------cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          729 EALVENDL------------------EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       729 ~~~~~~~~------------------~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ..+.....                  ....+......+.+++.+||+.||++|||+.|+++.
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  315 (359)
T cd07876         254 RNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH  315 (359)
T ss_pred             HHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence            00000000                  000111234568899999999999999999999985

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=6.9e-34  Score=301.63  Aligned_cols=261  Identities=21%  Similarity=0.272  Sum_probs=194.2

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.||+|++|.||+|... .+++.||+|++....  ....+.+.+|+.++++++|+||+++++++.+++..++||||++
T Consensus         4 ~~~~l~~g~~~~v~~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   82 (285)
T cd07861           4 KIEKIGEGTYGVVYKGRNK-KTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS   82 (285)
T ss_pred             EeeEecccCceEEEEEEEC-CCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC
Confidence            4578999999999999754 446789999986532  2234678899999999999999999999999999999999997


Q ss_pred             CCCccccccCC---CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          583 NGTVASFLFGD---SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       583 ~gsL~~~l~~~---~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                       ++|.+++...   ..+++..+..++.||++||+|||+.   +|+|+||||+|||+++++.+||+|||+++....... .
T Consensus        83 -~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~-~  157 (285)
T cd07861          83 -MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR-V  157 (285)
T ss_pred             -CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCcc-c
Confidence             5888887542   4678999999999999999999998   999999999999999999999999999976543221 1


Q ss_pred             cccccccCCcccccccccC-CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHH----HHhhcc-cchhH---
Q 003836          660 NTAIRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWA----YDRYQE-RTLEA---  730 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~---  730 (792)
                      .....+++.|+|||.+.+. .++.++||||||++++||+||+.||................    ...+.. ..+..   
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (285)
T cd07861         158 YTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKN  237 (285)
T ss_pred             ccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHh
Confidence            2223468899999988654 57899999999999999999999997543321111000000    000000 00000   


Q ss_pred             hhhchhc---ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          731 LVENDLE---AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       731 ~~~~~~~---~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .......   .......+.++.+++.+||+.||++|||+++|++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         238 TFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN  281 (285)
T ss_pred             hccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence            0000000   0001123567789999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=7.5e-34  Score=303.26  Aligned_cols=245  Identities=21%  Similarity=0.311  Sum_probs=197.9

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCCCc
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTV  586 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~gsL  586 (792)
                      ..||+|+||.||++... .+++.+|+|.+........+.+.+|+.+++.++||||+++++++..++..++|+||+++++|
T Consensus        27 ~~ig~g~~g~v~~~~~~-~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L  105 (297)
T cd06659          27 IKIGEGSTGIVCIAREK-HSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL  105 (297)
T ss_pred             hhcCCCCceeEEEEEEc-CCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence            46999999999999754 45678999998765555567889999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccccccc
Q 003836          587 ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGT  666 (792)
Q Consensus       587 ~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt  666 (792)
                      .+++.. ..+++..+..++.|++.||+|||+.   +++|+||||+||+++.++.+||+|||+++...... .......++
T Consensus       106 ~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~-~~~~~~~~~  180 (297)
T cd06659         106 TDIVSQ-TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-PKRKSLVGT  180 (297)
T ss_pred             HHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhccccc-ccccceecC
Confidence            987744 5678999999999999999999998   99999999999999999999999999987654322 122335688


Q ss_pred             CCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHHH
Q 003836          667 KGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLH  746 (792)
Q Consensus       667 ~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  746 (792)
                      ..|+|||.+.+..++.++||||||++++||++|+.||..........   .     ......     .  ..........
T Consensus       181 ~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~---~-----~~~~~~-----~--~~~~~~~~~~  245 (297)
T cd06659         181 PYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK---R-----LRDSPP-----P--KLKNAHKISP  245 (297)
T ss_pred             ccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---H-----HhccCC-----C--CccccCCCCH
Confidence            99999999998899999999999999999999999986543211100   0     000000     0  0001112345


Q ss_pred             HHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          747 RFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       747 ~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .+.+++.+||+.+|.+||+++++++.
T Consensus       246 ~l~~~i~~~l~~~P~~Rps~~~ll~~  271 (297)
T cd06659         246 VLRDFLERMLTREPQERATAQELLDH  271 (297)
T ss_pred             HHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            67889999999999999999999984

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=1.5e-33  Score=296.08  Aligned_cols=249  Identities=25%  Similarity=0.392  Sum_probs=200.5

Q ss_pred             hhhcCccccceEEEeeecCCCceEEEEEEcccccc------cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ------DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~------~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      .+.||+|++|.||++.. ..+++.+|+|.+.....      ...+.+.+|++++++++|+||+++++++.+.+..++|+|
T Consensus         5 ~~~lg~g~~~~v~~~~~-~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e   83 (268)
T cd06630           5 GQQLGTGAFSSCYQARD-VKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVE   83 (268)
T ss_pred             cceecCcCceEEEEEEE-cCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEe
Confidence            46799999999999975 35567899999864321      134678999999999999999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCC-CeEEeecCCCccccCCCCC
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY-NARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~-~~kl~Dfg~a~~~~~~~~~  658 (792)
                      |+++++|.+++.+...+++..+..++.||+.||.|||+.   +++|+||+|+||+++.++ .+||+|||.+.........
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~  160 (268)
T cd06630          84 WMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTG  160 (268)
T ss_pred             ccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccccccccccccccc
Confidence            999999999998777889999999999999999999998   999999999999998776 5999999999876543211


Q ss_pred             ---ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          659 ---TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       659 ---~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                         ......++..|+|||.+.+..++.++||||+|+++++|++|+.||...........             ........
T Consensus       161 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~-------------~~~~~~~~  227 (268)
T cd06630         161 AGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLAL-------------IFKIASAT  227 (268)
T ss_pred             CCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHH-------------HHHHhccC
Confidence               12234578899999999888899999999999999999999999864321110000             00111111


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .....+.....++.+++.+||+.+|++||++.|+++
T Consensus       228 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         228 TAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             CCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence            122234455678899999999999999999999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=8.5e-34  Score=304.18  Aligned_cols=252  Identities=19%  Similarity=0.271  Sum_probs=199.4

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      .+.+.||+|+||.||++.. ...++.|++|.+....   ....+.+.+|++++++++|+||+++++.+..++..++||||
T Consensus         4 ~~~~~l~~g~~~~v~~~~~-~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   82 (305)
T cd05609           4 ETIKLISNGAYGAVYLVRH-KETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEY   82 (305)
T ss_pred             eEeeEeecCCCeeEEEEEE-CCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEec
Confidence            3457899999999999965 4556789999987543   22345788999999999999999999999999999999999


Q ss_pred             ccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC----
Q 003836          581 MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ----  656 (792)
Q Consensus       581 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~----  656 (792)
                      +++++|.+++.....+++..+..++.|++.||.|||+.   +++|+||||+||+++.++.+||+|||+++......    
T Consensus        83 ~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~  159 (305)
T cd05609          83 VEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNL  159 (305)
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCcCccccc
Confidence            99999999998777889999999999999999999998   99999999999999999999999999987421110    


Q ss_pred             ----------CCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhccc
Q 003836          657 ----------SHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQER  726 (792)
Q Consensus       657 ----------~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~  726 (792)
                                ........++..|+|||.+.+..++.++||||||+++|||++|+.||.......   ...          
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~---~~~----------  226 (305)
T cd05609         160 YEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE---LFG----------  226 (305)
T ss_pred             cccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHH----------
Confidence                      001122457889999999988889999999999999999999999986432110   000          


Q ss_pred             chhHhhhchhc-ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhcc
Q 003836          727 TLEALVENDLE-AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEG  775 (792)
Q Consensus       727 ~~~~~~~~~~~-~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~  775 (792)
                         ........ .......+..+.+++.+||+.+|++||++.++.+.|+.
T Consensus       227 ---~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~  273 (305)
T cd05609         227 ---QVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH  273 (305)
T ss_pred             ---HHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence               00000000 00111345678899999999999999997777777655

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-33  Score=303.77  Aligned_cols=248  Identities=21%  Similarity=0.253  Sum_probs=198.6

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccccc---chHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD---SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~---~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +.+.||+|++|+||++... .+++.+|+|.+......   ..+.+.+|++++++++|+||+++++.+.+....++||||+
T Consensus         5 ~~~~ig~g~~g~vy~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   83 (316)
T cd05574           5 KIKLLGKGDVGRVFLVRLK-GTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYC   83 (316)
T ss_pred             EeeeecCCccEEEEEEEEc-CCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEec
Confidence            3467999999999999754 45678999998754322   4467899999999999999999999999999999999999


Q ss_pred             cCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC-
Q 003836          582 SNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH-  658 (792)
Q Consensus       582 ~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~-  658 (792)
                      ++++|.+++...  ..+++..+..++.||++||+|||+.   +++|+||||+||+++.++.++|+|||++......... 
T Consensus        84 ~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~  160 (316)
T cd05574          84 PGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV  160 (316)
T ss_pred             CCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence            999999998754  4688999999999999999999998   9999999999999999999999999998754321110 


Q ss_pred             ---------------------------ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhh
Q 003836          659 ---------------------------TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVD  711 (792)
Q Consensus       659 ---------------------------~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~  711 (792)
                                                 ......|+..|+|||.+.+..++.++||||||+++|+|++|+.||........
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~  240 (316)
T cd05574         161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDET  240 (316)
T ss_pred             ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHH
Confidence                                       11123578899999999988899999999999999999999999965432211


Q ss_pred             hhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCC----HHhHHHH
Q 003836          712 KAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPT----MRKVTQM  772 (792)
Q Consensus       712 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs----~~evl~~  772 (792)
                                      ...+................+.+++.+||+.+|++||+    ++|+++.
T Consensus       241 ----------------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~  289 (316)
T cd05574         241 ----------------FSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH  289 (316)
T ss_pred             ----------------HHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence                            01111111111111225678899999999999999999    7777763

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=1.1e-33  Score=300.28  Aligned_cols=263  Identities=21%  Similarity=0.262  Sum_probs=199.1

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .+.+.||+|++|.||+|... .+++.+++|++....  ....+.+.+|+.++++++|+||+++++++..+...++||||+
T Consensus         3 ~~~~~l~~g~~~~v~~~~~~-~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   81 (286)
T cd07832           3 KILGRIGEGAHGIVFKAKDR-ETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM   81 (286)
T ss_pred             eEEeecccCCCcEEEEEEEC-CCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc
Confidence            45578999999999999764 346789999987643  334568999999999999999999999999999999999999


Q ss_pred             cCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          582 SNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       582 ~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                       +++|.+++... ..+++.++..++.||++||+|||+.   +++|+||||+||+++.++.++|+|||++...........
T Consensus        82 -~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~  157 (286)
T cd07832          82 -PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLY  157 (286)
T ss_pred             -CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCcc
Confidence             99999998653 5689999999999999999999998   999999999999999999999999999987654433223


Q ss_pred             ccccccCCcccccccccC-CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH-------HHHhhcc-cchhHh
Q 003836          661 TAIRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW-------AYDRYQE-RTLEAL  731 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~-------~~~~~~~-~~~~~~  731 (792)
                      ....++..|+|||.+.+. .++.++||||+|++++||++|+.+|...............       .+....+ .....+
T Consensus       158 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (286)
T cd07832         158 SHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKI  237 (286)
T ss_pred             ccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcc
Confidence            345688999999998654 4689999999999999999998777544321111000000       0000000 000000


Q ss_pred             hhchhc----ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          732 VENDLE----AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       732 ~~~~~~----~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ......    .....+....+.+++.+||+.+|++||+++++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~  281 (286)
T cd07832         238 TFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR  281 (286)
T ss_pred             cCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            000000    0001123478899999999999999999999998

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.2e-33  Score=306.12  Aligned_cols=259  Identities=22%  Similarity=0.275  Sum_probs=190.9

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccc--cchHHHHHHHHHhcccCCCCcccccceeccC------Cce
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ--DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEG------QNR  574 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~------~~~  574 (792)
                      +...+.||+|+||+||++... .+++.||||++.....  ...+.+.+|++++++++|+||+++++++...      ...
T Consensus        17 y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   95 (343)
T cd07878          17 YQNLTPVGSGAYGSVCSAYDT-RLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEV   95 (343)
T ss_pred             hhhheecccCCCeEEEEEEEC-CCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcE
Confidence            344578999999999999654 4567899999875322  2345678999999999999999999988543      457


Q ss_pred             EEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccC
Q 003836          575 LLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL  654 (792)
Q Consensus       575 ~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~  654 (792)
                      ++++|++ +++|.+++. ...+++..+..++.||+.||.|||+.   +|+||||||+|||+++++.+||+|||+++....
T Consensus        96 ~~~~~~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~  170 (343)
T cd07878          96 YLVTNLM-GADLNNIVK-CQKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLARQADD  170 (343)
T ss_pred             EEEeecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCCccceecCC
Confidence            8999988 678887774 35688999999999999999999998   999999999999999999999999999986543


Q ss_pred             CCCCccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHH-------HHhhccc
Q 003836          655 DQSHTNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWA-------YDRYQER  726 (792)
Q Consensus       655 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~-------~~~~~~~  726 (792)
                      .    .....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||................       .......
T Consensus       171 ~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (343)
T cd07878         171 E----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSE  246 (343)
T ss_pred             C----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchh
Confidence            2    233468999999999876 578999999999999999999999996532211100000000       0000000


Q ss_pred             chhHhhhchhcccCC-------HHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          727 TLEALVENDLEAMNN-------VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       727 ~~~~~~~~~~~~~~~-------~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .....+.. +.....       ......+.+++.+||+.||.+|||+.|+++.
T Consensus       247 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h  298 (343)
T cd07878         247 HARKYIQS-LPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH  298 (343)
T ss_pred             hHHHHhhc-cccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            00000000 000000       0122457899999999999999999999975

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=1.5e-33  Score=295.30  Aligned_cols=243  Identities=22%  Similarity=0.280  Sum_probs=198.5

Q ss_pred             cCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCCC
Q 003836          509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGT  585 (792)
Q Consensus       509 lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~gs  585 (792)
                      ||.|++|.||++... ..++.+++|++....   ....+.+.+|+.++++++|+||+++++.+.++...++|+||+++++
T Consensus         1 lg~g~~~~v~~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   79 (262)
T cd05572           1 LGVGGFGRVELVKVK-SKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGE   79 (262)
T ss_pred             CCCCCceEEEEEEEC-CCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCc
Confidence            699999999999764 456789999986532   2345679999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccccccc
Q 003836          586 VASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRG  665 (792)
Q Consensus       586 L~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~g  665 (792)
                      |.+++.+...+++..+..++.||+.||+|||+.   +++|+||+|+||+++.++.+||+|||+++......  ......+
T Consensus        80 L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~~~~~  154 (262)
T cd05572          80 LWTILRDRGLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTWTFCG  154 (262)
T ss_pred             HHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--ccccccC
Confidence            999998877889999999999999999999998   99999999999999999999999999998764332  2223457


Q ss_pred             cCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHH
Q 003836          666 TKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTML  745 (792)
Q Consensus       666 t~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  745 (792)
                      ++.|+|||.+....++.++|+||||+++|||++|..||..........              ...+.........+....
T Consensus       155 ~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~  220 (262)
T cd05572         155 TPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEI--------------YNDILKGNGKLEFPNYID  220 (262)
T ss_pred             CcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHH--------------HHHHhccCCCCCCCcccC
Confidence            889999999988889999999999999999999999997543211000              011111111122233336


Q ss_pred             HHHHHHHHHccccCCCCCCC-----HHhHHH
Q 003836          746 HRFVMVAFWCIQEDPSHRPT-----MRKVTQ  771 (792)
Q Consensus       746 ~~l~~l~~~Cl~~~p~~RPs-----~~evl~  771 (792)
                      ..+.+++.+||+.+|++||+     ++|+++
T Consensus       221 ~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~  251 (262)
T cd05572         221 KAAKDLIKQLLRRNPEERLGNLKGGIKDIKK  251 (262)
T ss_pred             HHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence            78899999999999999999     666665

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=8.9e-34  Score=300.66  Aligned_cols=261  Identities=19%  Similarity=0.263  Sum_probs=194.2

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .+.+.||+|+||.||++... .+++.+|+|++....  ......+.+|++++++++|+||+++++++.+....++|+||+
T Consensus         3 ~~~~~l~~g~~~~vy~~~~~-~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   81 (284)
T cd07839           3 EKLEKIGEGTYGTVFKAKNR-ETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYC   81 (284)
T ss_pred             eeEEEecccCCeEEEEEEEC-CCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecC
Confidence            34578999999999999754 456789999986432  223456888999999999999999999999999999999999


Q ss_pred             cCCCccccccC-CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          582 SNGTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       582 ~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      ++ +|.+++.. ...+++..+..++.||++||.|||+.   +|+|+||||+||+++.++.+||+|||+++....... ..
T Consensus        82 ~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~-~~  156 (284)
T cd07839          82 DQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR-CY  156 (284)
T ss_pred             CC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC-Cc
Confidence            75 78777754 45689999999999999999999998   999999999999999999999999999986543222 12


Q ss_pred             ccccccCCcccccccccC-CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhh-hHHHHHHHhhccc---chhHhhhch
Q 003836          661 TAIRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKA-ILTDWAYDRYQER---TLEALVEND  735 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~  735 (792)
                      ....+++.|+|||.+.+. .++.++|||||||++|||++|+.|+.......... .+.... ....+.   .+....+..
T Consensus       157 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  235 (284)
T cd07839         157 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLL-GTPTEESWPGVSKLPDYK  235 (284)
T ss_pred             CCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHh-CCCChHHhHHhhhccccc
Confidence            234578899999998764 47899999999999999999999875432211110 000000 000000   000000000


Q ss_pred             ----hc-----ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          736 ----LE-----AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       736 ----~~-----~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                          ..     .......+.++.+++.+||+.||.+|||++|+++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         236 PYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             ccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence                00     0011224567889999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=1.5e-33  Score=295.27  Aligned_cols=249  Identities=26%  Similarity=0.348  Sum_probs=204.9

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccc-cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      .+.+.||+|++|.||++.... +++.+++|++..... ...+.+.+|++.+.+++|+||+++++++...+..++|+||++
T Consensus         4 ~~~~~i~~g~~~~v~~~~~~~-~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~   82 (264)
T cd06623           4 ERVKVLGQGSSGVVYKVRHKP-TGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMD   82 (264)
T ss_pred             eeeeeeeecCCeEEEEEEEcC-CCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecC
Confidence            345789999999999997653 567899999876543 456789999999999999999999999999999999999999


Q ss_pred             CCCccccccCCCCCchhHHHHHHHHHHHHHHHHhh-ccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          583 NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE-ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       583 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      +++|.+++.....+++..+..++.|+++||+|||+ .   +++|+||+|+||+++.++.++|+|||++.......... .
T Consensus        83 ~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~-~  158 (264)
T cd06623          83 GGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQC-N  158 (264)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecccCCCcc-c
Confidence            99999999877889999999999999999999999 8   99999999999999999999999999998765433222 2


Q ss_pred             cccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCC
Q 003836          662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN  741 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  741 (792)
                      ...++..|+|||.+.+..++.++||||||+++|||++|+.|+...........             ...+.... ....+
T Consensus       159 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~-------------~~~~~~~~-~~~~~  224 (264)
T cd06623         159 TFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFEL-------------MQAICDGP-PPSLP  224 (264)
T ss_pred             ceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHH-------------HHHHhcCC-CCCCC
Confidence            34578899999999998999999999999999999999999865432100000             01111111 11122


Q ss_pred             HH-HHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          742 VT-MLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       742 ~~-~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .. .+..+.+++.+||+.+|++||++.|+++
T Consensus       225 ~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~  255 (264)
T cd06623         225 AEEFSPEFRDFISACLQKDPKKRPSAAELLQ  255 (264)
T ss_pred             cccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence            22 5678899999999999999999999998

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=1.4e-33  Score=294.40  Aligned_cols=246  Identities=20%  Similarity=0.293  Sum_probs=199.5

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccc--cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV--FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .+.+.||+|+||.||++... .+++.+++|++...  .....+++.+|+.++++++|+||+++++++.+.+..++|+||+
T Consensus         3 ~~~~~lg~g~~g~~~~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd08218           3 VKVKKIGEGSFGKAILVKSK-EDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYC   81 (256)
T ss_pred             eEEEEeccCCceEEEEEEEc-CCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecC
Confidence            34578999999999999764 35678999998643  2334568999999999999999999999999999999999999


Q ss_pred             cCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          582 SNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       582 ~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      ++++|.+++...  ..+++..+.+++.|++.||.|||+.   +++|+||+|+|||++.++.++|+|||++........ .
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~-~  157 (256)
T cd08218          82 EGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE-L  157 (256)
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh-h
Confidence            999999988654  3578899999999999999999998   999999999999999999999999999986543221 1


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      .....+++.|+|||.+.+..++.++||||||+++++|++|+.||........       .         ..++.. ....
T Consensus       158 ~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~-------~---------~~~~~~-~~~~  220 (256)
T cd08218         158 ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNL-------V---------LKIIRG-SYPP  220 (256)
T ss_pred             hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHH-------H---------HHHhcC-CCCC
Confidence            2234578899999999988999999999999999999999999864322100       0         001111 0111


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .+......+.+++.+||+.+|++||++.+|++
T Consensus       221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~  252 (256)
T cd08218         221 VSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE  252 (256)
T ss_pred             CcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence            23344667899999999999999999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=1.5e-33  Score=300.02  Aligned_cols=256  Identities=25%  Similarity=0.355  Sum_probs=196.3

Q ss_pred             HHHHHHHHhhh--hhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhccc-CCCCcccccceeccC
Q 003836          495 YKELVEVTRGF--KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEG  571 (792)
Q Consensus       495 ~~el~~~~~~~--~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~  571 (792)
                      ..++..++.+|  .+.||+|+||.||++... .+++.+|+|.+... ......+.+|+.+++++ +|+|++++++++...
T Consensus        14 ~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~-~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~   91 (291)
T cd06639          14 LESLGDPTDTWEIIETIGKGTYGKVYKVTNK-KDGSLAAVKILDPI-SDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA   91 (291)
T ss_pred             cccCCCCCCCeEEEEEeecCCCeEEEEEEEC-CCCCEEEEEEeccc-ccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence            33444444444  468999999999999754 45678999998653 23346788899999998 899999999998643


Q ss_pred             -----CceEEEEEeccCCCccccccC----CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeE
Q 003836          572 -----QNRLLVYEFMSNGTVASFLFG----DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNAR  642 (792)
Q Consensus       572 -----~~~~lV~E~~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~k  642 (792)
                           ...++|+||+++++|.+++..    ...+++..+..++.|++.||.|||+.   +++|+||||+||++++++.+|
T Consensus        92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~~k  168 (291)
T cd06639          92 DKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVK  168 (291)
T ss_pred             cccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEE
Confidence                 358999999999999998753    35688999999999999999999998   999999999999999999999


Q ss_pred             EeecCCCccccCCCCCccccccccCCcccccccccC-----CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHH
Q 003836          643 ISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM-----PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTD  717 (792)
Q Consensus       643 l~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~  717 (792)
                      |+|||+++........ .....++..|+|||.+...     .++.++|||||||++|||++|+.||........   +..
T Consensus       169 l~dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~---~~~  244 (291)
T cd06639         169 LVDFGVSAQLTSTRLR-RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT---LFK  244 (291)
T ss_pred             Eeecccchhccccccc-ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHH---HHH
Confidence            9999998865432211 1234578899999998643     368999999999999999999999865422111   000


Q ss_pred             HHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          718 WAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                           ........       ...+......+.+++.+||+.+|++||++.|+++
T Consensus       245 -----~~~~~~~~-------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~  286 (291)
T cd06639         245 -----IPRNPPPT-------LLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE  286 (291)
T ss_pred             -----HhcCCCCC-------CCcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence                 00000000       0112234457889999999999999999999998

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=1.6e-33  Score=295.02  Aligned_cols=250  Identities=25%  Similarity=0.368  Sum_probs=198.2

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccc--cccchHHHHHHHHHhcccCCCCcccccceecc--CCceEEEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV--FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDE--GQNRLLVYE  579 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~--~~~~~lV~E  579 (792)
                      .+.+.||.|+||.||++... .+++.+|+|++...  .....+.+.+|++++++++|+||+++++++..  ....+++||
T Consensus         3 ~~~~~lg~g~~~~v~~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e   81 (265)
T cd08217           3 EVLETIGKGSFGTVRKVRRK-SDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVME   81 (265)
T ss_pred             eeeeeeccCCCeEEEEeeec-CCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEeh
Confidence            34577999999999999654 45678999988643  23345678899999999999999999998753  456789999


Q ss_pred             eccCCCccccccC----CCCCchhHHHHHHHHHHHHHHHHhhcc--CCCeEecCCCCCcEEEcCCCCeEEeecCCCcccc
Q 003836          580 FMSNGTVASFLFG----DSKPNWKLRTEIAMGIAGGLFYLHEEC--CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT  653 (792)
Q Consensus       580 ~~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~  653 (792)
                      |+++++|.+++..    ...+++..+..++.||+.||+|||..+  ..+++|+||+|+||++++++.+||+|||+++...
T Consensus        82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~  161 (265)
T cd08217          82 YCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILG  161 (265)
T ss_pred             hccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccccccc
Confidence            9999999999865    356889999999999999999999322  2399999999999999999999999999998765


Q ss_pred             CCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhh
Q 003836          654 LDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVE  733 (792)
Q Consensus       654 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  733 (792)
                      ..... .....+++.|+|||.+.+..++.++||||||+++++|++|+.||.......    +.    ..         +.
T Consensus       162 ~~~~~-~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~----~~----~~---------~~  223 (265)
T cd08217         162 HDSSF-AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQ----LA----SK---------IK  223 (265)
T ss_pred             CCccc-ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHH----HH----HH---------Hh
Confidence            43321 233458999999999998889999999999999999999999997543110    00    00         11


Q ss_pred             chhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          734 NDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       734 ~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .......+...+..+.+++.+||+.+|++||++++|+++
T Consensus       224 ~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         224 EGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             cCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence            111112233456788999999999999999999999983

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=1.8e-33  Score=294.65  Aligned_cols=246  Identities=23%  Similarity=0.350  Sum_probs=198.5

Q ss_pred             cCccccceEEEeeecCCCceEEEEEEcccccc---cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCCC
Q 003836          509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ---DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGT  585 (792)
Q Consensus       509 lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~gs  585 (792)
                      ||+|+||.||++... .+++.+++|.+.....   ...+.+.+|++++++++|+||+++++.+..+...++|+||+++++
T Consensus         1 lg~g~~~~vy~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   79 (265)
T cd05579           1 ISKGAYGRVFLAKKK-STGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGD   79 (265)
T ss_pred             CCCCCceEEEEEEEC-CCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCc
Confidence            689999999999764 4467899999865433   345678999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC-------C
Q 003836          586 VASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS-------H  658 (792)
Q Consensus       586 L~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~-------~  658 (792)
                      |.+++.+...+++..+..++.||+.||+|||+.   +++|+||+|+||++++++.+||+|||++........       .
T Consensus        80 L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  156 (265)
T cd05579          80 LASLLENVGSLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEK  156 (265)
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccc
Confidence            999998777889999999999999999999998   999999999999999999999999999886543321       1


Q ss_pred             ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          659 TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      ......++..|+|||.+.....+.++||||||++++||++|+.||........   .             ..+.......
T Consensus       157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~---~-------------~~~~~~~~~~  220 (265)
T cd05579         157 EDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEI---F-------------QNILNGKIEW  220 (265)
T ss_pred             cccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH---H-------------HHHhcCCcCC
Confidence            22334578899999999888899999999999999999999999965432110   0             0011111111


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhc
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE  774 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~  774 (792)
                      ......+..+.+++.+||+.+|.+|||+.++.+.|+
T Consensus       221 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~  256 (265)
T cd05579         221 PEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN  256 (265)
T ss_pred             CccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence            111112577889999999999999999966666664

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=2.3e-33  Score=292.53  Aligned_cols=245  Identities=24%  Similarity=0.354  Sum_probs=197.6

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccc--cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV--FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .+.+.||+|++|.||++... .+++.+|+|.+...  .....+.+.+|++++++++|+||+++++.+..++..++||||+
T Consensus         3 ~~~~~lg~g~~~~v~~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (256)
T cd08220           3 EKIRVVGRGAFGIVHLCRRK-ADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYA   81 (256)
T ss_pred             eEEEEecccCceEEEEEEEc-CCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecC
Confidence            45578999999999999654 45678999998653  2334568999999999999999999999999999999999999


Q ss_pred             cCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC-CCeEEeecCCCccccCCCCC
Q 003836          582 SNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH-YNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       582 ~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~-~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      ++++|.+++...  ..+++..+.+++.|+++||+|||+.   +++|+||+|+||+++++ ..+||+|||+++......  
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~--  156 (256)
T cd08220          82 PGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS--  156 (256)
T ss_pred             CCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc--
Confidence            999999999764  3578999999999999999999998   99999999999999865 458999999998764322  


Q ss_pred             ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          659 TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      ......++..|+|||.+....++.++||||||+++|+|++|+.||........       ...         .... ...
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~-------~~~---------~~~~-~~~  219 (256)
T cd08220         157 KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPAL-------VLK---------IMSG-TFA  219 (256)
T ss_pred             cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHH-------HHH---------HHhc-CCC
Confidence            12234578899999999988899999999999999999999999865422110       000         0000 001


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ..+......+.+++.+||+.+|++|||++|+++
T Consensus       220 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~  252 (256)
T cd08220         220 PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA  252 (256)
T ss_pred             CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence            112234567889999999999999999999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=2.5e-33  Score=297.44  Aligned_cols=244  Identities=23%  Similarity=0.357  Sum_probs=198.1

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCCCc
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTV  586 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~gsL  586 (792)
                      +.||+|++|.||++... ..++.+++|++........+.+.+|+.++++++|+||+++++++...+..++|+||+++++|
T Consensus        25 ~~lg~g~~g~v~~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L  103 (285)
T cd06648          25 VKIGEGSTGIVCIATDK-STGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGAL  103 (285)
T ss_pred             eEeccCCCeEEEEEEEC-CCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCH
Confidence            57999999999999754 45678999998765555567789999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccccccc
Q 003836          587 ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGT  666 (792)
Q Consensus       587 ~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt  666 (792)
                      .+++.. ..+++..+..++.|++.||+|||+.   +++||||+|+||+++.++.++|+|||.+........ ......|+
T Consensus       104 ~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~-~~~~~~~~  178 (285)
T cd06648         104 TDIVTH-TRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP-RRKSLVGT  178 (285)
T ss_pred             HHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCCc-ccccccCC
Confidence            999876 5688999999999999999999998   999999999999999999999999998876543221 12234588


Q ss_pred             CCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHHH
Q 003836          667 KGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLH  746 (792)
Q Consensus       667 ~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  746 (792)
                      +.|+|||.+.+..++.++||||||++++||++|+.||.........        .......     .+..  ........
T Consensus       179 ~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~--------~~~~~~~-----~~~~--~~~~~~~~  243 (285)
T cd06648         179 PYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAM--------KRIRDNL-----PPKL--KNLHKVSP  243 (285)
T ss_pred             ccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHH--------HHHHhcC-----CCCC--cccccCCH
Confidence            9999999998888999999999999999999999998653221000        0000000     0000  01112456


Q ss_pred             HHHHHHHHccccCCCCCCCHHhHHH
Q 003836          747 RFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       747 ~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .+.+++.+||+.+|++||++.++++
T Consensus       244 ~l~~li~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         244 RLRSFLDRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             HHHHHHHHHcccChhhCcCHHHHcc
Confidence            7899999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=3.3e-33  Score=295.30  Aligned_cols=247  Identities=24%  Similarity=0.344  Sum_probs=198.9

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +.+.++||+|+||.||+|... .+++.+|+|.+.... ....+.+.+|+.++.+++|+||+++++++..+...++||||+
T Consensus         6 ~~~~~~ig~G~~~~vy~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06641           6 FTKLEKIGKGSFGEVFKGIDN-RTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL   84 (277)
T ss_pred             hhhheeEeecCCeEEEEEEEC-CCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence            345678999999999999653 456789999876432 234467899999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      ++++|.+++.. ..+++..+..++.|++.||.|||+.   +++|+||+|+||+++.++.++|+|||++....... ....
T Consensus        85 ~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~-~~~~  159 (277)
T cd06641          85 GGGSALDLLEP-GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IKRN  159 (277)
T ss_pred             CCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccch-hhhc
Confidence            99999999864 4578999999999999999999998   99999999999999999999999999987654322 1122


Q ss_pred             cccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCC
Q 003836          662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN  741 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  741 (792)
                      ...++..|+|||.+.+..++.++|||||||++|||++|..|+........       . ..         +........+
T Consensus       160 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-------~-~~---------~~~~~~~~~~  222 (277)
T cd06641         160 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKV-------L-FL---------IPKNNPPTLE  222 (277)
T ss_pred             cccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHH-------H-HH---------HhcCCCCCCC
Confidence            34578899999999888899999999999999999999999864321100       0 00         0000111122


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          742 VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       742 ~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ......+.+++.+||+.+|.+||++.++++.
T Consensus       223 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         223 GNYSKPLKEFVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             cccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            2345678899999999999999999999984

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=2.6e-33  Score=296.32  Aligned_cols=243  Identities=23%  Similarity=0.253  Sum_probs=189.8

Q ss_pred             hcCccccceEEEeeecCCCceEEEEEEcccccc---cchHHHHHHHHHhc---ccCCCCcccccceeccCCceEEEEEec
Q 003836          508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ---DSEKEFKAEVNGIG---QTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       508 ~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~---~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .||+|+||.||++... .+++.+|+|.+.....   .....+.+|..+++   ..+|+||+.+++++...+..++||||+
T Consensus         1 ~lg~G~~g~Vy~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~   79 (279)
T cd05633           1 IIGRGGFGEVYGCRKA-DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLM   79 (279)
T ss_pred             CcccCCCeEEEEEEEC-CCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecC
Confidence            4899999999999754 4567999998865322   22233445544433   347999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      ++++|.+++.....+++..+..++.|++.||.|||+.   +|+|+||||+|||+++++.+||+|||++.......   ..
T Consensus        80 ~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~---~~  153 (279)
T cd05633          80 NGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---PH  153 (279)
T ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccC---cc
Confidence            9999999998778899999999999999999999998   99999999999999999999999999987553221   12


Q ss_pred             cccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          662 AIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ...|++.|+|||.+.+ ..++.++|||||||+++||++|+.||......... .+..             . ........
T Consensus       154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~-~~~~-------------~-~~~~~~~~  218 (279)
T cd05633         154 ASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDR-------------M-TLTVNVEL  218 (279)
T ss_pred             CcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH-HHHH-------------H-hhcCCcCC
Confidence            3458999999999864 56899999999999999999999999643221110 0000             0 00011122


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCC-----CHHhHHHH
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRP-----TMRKVTQM  772 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RP-----s~~evl~~  772 (792)
                      +...+.++.+++.+||+.||++||     +++|++++
T Consensus       219 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h  255 (279)
T cd05633         219 PDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH  255 (279)
T ss_pred             ccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence            334567888999999999999999     69999885

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=1.9e-33  Score=299.23  Aligned_cols=242  Identities=25%  Similarity=0.287  Sum_probs=199.2

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      .+.+.||+|++|.||++... ..++.+|+|.+....   ....+.+.+|++++++++||||+++++++.+++..++||||
T Consensus         4 ~~~~~ig~g~~~~vy~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   82 (290)
T cd05580           4 EFIKTLGTGSFGRVMLVRHK-GSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEY   82 (290)
T ss_pred             EEEEEeecCCCeEEEEEEEc-CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEec
Confidence            45578999999999999764 356789999986532   22346788999999999999999999999999999999999


Q ss_pred             ccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          581 MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       581 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +++++|.+++.....+++..+..++.||+.||.|||+.   +|+|+||+|+|||+++++.+||+|||+++.....    .
T Consensus        83 ~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~----~  155 (290)
T cd05580          83 VPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR----T  155 (290)
T ss_pred             CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCCC----C
Confidence            99999999998888899999999999999999999998   9999999999999999999999999999876433    2


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ....+++.|+|||.+.+...+.++||||||+++|+|++|+.||........   .             ..+....  ...
T Consensus       156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~-------------~~~~~~~--~~~  217 (290)
T cd05580         156 YTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQI---Y-------------EKILEGK--VRF  217 (290)
T ss_pred             CCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH---H-------------HHHhcCC--ccC
Confidence            334588999999999888899999999999999999999999865431100   0             0011110  112


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCC-----CHHhHHH
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRP-----TMRKVTQ  771 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RP-----s~~evl~  771 (792)
                      +......+.+++.+||+.+|.+||     +++|+++
T Consensus       218 ~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~  253 (290)
T cd05580         218 PSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN  253 (290)
T ss_pred             CccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence            223356788999999999999999     7777764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=2.1e-33  Score=298.08  Aligned_cols=247  Identities=25%  Similarity=0.343  Sum_probs=191.5

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhccc-CCCCcccccceec-----cCCceEEEE
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT-HHKNLVRLLGYCD-----EGQNRLLVY  578 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~-----~~~~~~lV~  578 (792)
                      +.+.||+|+||.||++... ..++.+|+|++... .....++.+|+.+++++ +|+||+++++++.     .++..++||
T Consensus        22 ~~~~lg~g~~~~vy~~~~~-~~~~~~~ik~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~   99 (286)
T cd06638          22 IIETIGKGTYGKVFKVLNK-KNGSKAAVKILDPI-HDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVL   99 (286)
T ss_pred             eeeeeccCCCcEEEEEEEC-CCCceeEEEeeccc-cchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEE
Confidence            4578999999999999764 45678999987653 23346788999999999 6999999999883     445689999


Q ss_pred             EeccCCCccccccC----CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccC
Q 003836          579 EFMSNGTVASFLFG----DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL  654 (792)
Q Consensus       579 E~~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~  654 (792)
                      ||+++++|.+++..    ...+++..+..++.|+++||.|||+.   +|+||||||+||++++++.+||+|||+++....
T Consensus       100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~  176 (286)
T cd06638         100 ELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTS  176 (286)
T ss_pred             eecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCEEEccCCceeeccc
Confidence            99999999988752    34678889999999999999999998   999999999999999999999999999986643


Q ss_pred             CCCCccccccccCCccccccccc-----CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchh
Q 003836          655 DQSHTNTAIRGTKGYVAPEWFRN-----MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLE  729 (792)
Q Consensus       655 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  729 (792)
                      .. .......|++.|+|||.+..     ..++.++|||||||++|||++|+.|+..........        ....... 
T Consensus       177 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~--------~~~~~~~-  246 (286)
T cd06638         177 TR-LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALF--------KIPRNPP-  246 (286)
T ss_pred             CC-CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHh--------hccccCC-
Confidence            22 12233458999999999853     457899999999999999999999986542211000        0000000 


Q ss_pred             HhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          730 ALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       730 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                          .  ....+......+.+++.+||+.+|++|||+.||++.
T Consensus       247 ----~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         247 ----P--TLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             ----C--cccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence                0  000111234568899999999999999999999974

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=7.4e-34  Score=331.62  Aligned_cols=250  Identities=20%  Similarity=0.293  Sum_probs=193.1

Q ss_pred             HhhhhhhcCccccceEEEeeecCCCceEEEEEEcccc--cccchHHHHHHHHHhcccCCCCcccccceecc--CCceEEE
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV--FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDE--GQNRLLV  577 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~--~~~~~lV  577 (792)
                      .+.+.+.||+|+||+||++... ..++.+|+|++...  .......+..|+.++++++|||||++++++.+  ....+||
T Consensus        14 ~YeIl~kLG~GgFGtVYLAkdk-~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIV   92 (1021)
T PTZ00266         14 EYEVIKKIGNGRFGEVFLVKHK-RTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYIL   92 (1021)
T ss_pred             CEEEEEEEecCCCeEEEEEEEC-CCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEE
Confidence            4556688999999999999764 45678999988643  23345678999999999999999999998854  4568999


Q ss_pred             EEeccCCCccccccCC----CCCchhHHHHHHHHHHHHHHHHhhccC----CCeEecCCCCCcEEEcC------------
Q 003836          578 YEFMSNGTVASFLFGD----SKPNWKLRTEIAMGIAGGLFYLHEECC----TQIIHCDIKPQNILLDD------------  637 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~----~~l~~~~~~~i~~~ia~gL~yLH~~~~----~~ivH~dikp~NILl~~------------  637 (792)
                      |||+++|+|.++|...    ..+++..++.|+.||+.||+|||+...    .+|+||||||+||||+.            
T Consensus        93 MEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~  172 (1021)
T PTZ00266         93 MEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQA  172 (1021)
T ss_pred             EeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccc
Confidence            9999999999998642    468999999999999999999998521    25999999999999964            


Q ss_pred             -----CCCeEEeecCCCccccCCCCCccccccccCCccccccccc--CCCCcccceehHHHHHHHHHhcCcCCCcchhhh
Q 003836          638 -----HYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN--MPITVKVDVYSYGVLLLEIICLRRNIDNEISKV  710 (792)
Q Consensus       638 -----~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~  710 (792)
                           ...+||+|||+++......  ......||+.|+|||++..  ..++.++|||||||+||||++|+.||.......
T Consensus       173 ~n~ng~~iVKLsDFGlAr~l~~~s--~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~  250 (1021)
T PTZ00266        173 NNLNGRPIAKIGDFGLSKNIGIES--MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFS  250 (1021)
T ss_pred             cccCCCCceEEccCCccccccccc--cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHH
Confidence                 2348999999998654322  2234568999999999854  458999999999999999999999996432211


Q ss_pred             hhhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          711 DKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       711 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .  .+     ......       +.+   .....+.++.+|+..||+.+|.+||++.|+++
T Consensus       251 q--li-----~~lk~~-------p~l---pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~  294 (1021)
T PTZ00266        251 Q--LI-----SELKRG-------PDL---PIKGKSKELNILIKNLLNLSAKERPSALQCLG  294 (1021)
T ss_pred             H--HH-----HHHhcC-------CCC---CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence            1  00     000000       000   01123567889999999999999999999984

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-33  Score=292.63  Aligned_cols=246  Identities=22%  Similarity=0.348  Sum_probs=208.0

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccccc--chHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~--~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      |.+.+.||+|-|..|-++++ .-+++.||||++.+..-+  ....+..|++.|+.++|||||+||.+......+|||+|.
T Consensus        20 YDLekTlG~GHFAVVKLArH-VFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL   98 (864)
T KOG4717|consen   20 YDLEKTLGRGHFAVVKLARH-VFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL   98 (864)
T ss_pred             ehhhhhhcCCceehhhhhhh-hcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence            44567899999999998864 456789999999865333  346788999999999999999999999999999999999


Q ss_pred             ccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEE-cCCCCeEEeecCCCccccCCCCC
Q 003836          581 MSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILL-DDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       581 ~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl-~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      =++|+|.+|+-++ ..+++....+++.||..|+.|+|+.   .+|||||||+|+.+ ..-|-+||.|||++-.+.+.+  
T Consensus        99 GD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~--  173 (864)
T KOG4717|consen   99 GDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGK--  173 (864)
T ss_pred             cCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCCcc--
Confidence            9999999999765 6789999999999999999999998   99999999999976 566889999999998775443  


Q ss_pred             ccccccccCCcccccccccCCCC-cccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhc
Q 003836          659 TNTAIRGTKGYVAPEWFRNMPIT-VKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLE  737 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~~~~-~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  737 (792)
                      .....+|+..|-|||++.+..|+ ++.||||||||||-|++|+.||....+.                +.+..++|-.  
T Consensus       174 kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS----------------ETLTmImDCK--  235 (864)
T KOG4717|consen  174 KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS----------------ETLTMIMDCK--  235 (864)
T ss_pred             hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch----------------hhhhhhhccc--
Confidence            34567899999999999999987 6899999999999999999999754322                1222333322  


Q ss_pred             ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          738 AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       738 ~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      -..+...+.++.+||..||+.||.+|.+.+||+..
T Consensus       236 YtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~  270 (864)
T KOG4717|consen  236 YTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVST  270 (864)
T ss_pred             ccCchhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence            23456788999999999999999999999999863

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=2.7e-33  Score=298.46  Aligned_cols=249  Identities=24%  Similarity=0.330  Sum_probs=200.3

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.+.||+|+||.||++... .++..+++|.+........+.+.+|+.++++++||||+++++.+...+..++|+||++
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~-~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~   99 (293)
T cd06647          21 YTRFEKIGQGASGTVYTAIDV-ATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLA   99 (293)
T ss_pred             ceeeeEecCCCCeEEEEEEEc-CCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCC
Confidence            345578999999999999643 4457899999875555556788999999999999999999999999999999999999


Q ss_pred             CCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          583 NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       583 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      +++|.+++.+. .+++..+..++.|++.||.|||+.   +++|+||||+||+++.++.+||+|||++........ ....
T Consensus       100 ~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~-~~~~  174 (293)
T cd06647         100 GGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-KRST  174 (293)
T ss_pred             CCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceeccccccc-cccc
Confidence            99999998653 578889999999999999999998   999999999999999999999999999876543322 2223


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCH
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV  742 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  742 (792)
                      ..+++.|+|||.+....++.++||||||+++||+++|+.||............       .        ...........
T Consensus       175 ~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~-------~--------~~~~~~~~~~~  239 (293)
T cd06647         175 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI-------A--------TNGTPELQNPE  239 (293)
T ss_pred             ccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeeh-------h--------cCCCCCCCCcc
Confidence            45888999999998888999999999999999999999999654321110000       0        00000011122


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          743 TMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       743 ~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .....+.+++.+||+.+|++||++++++.+
T Consensus       240 ~~~~~l~~li~~~l~~~p~~Rp~~~~il~h  269 (293)
T cd06647         240 KLSAIFRDFLNRCLEMDVEKRGSAKELLQH  269 (293)
T ss_pred             ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            344568889999999999999999999976

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=2.1e-33  Score=294.68  Aligned_cols=251  Identities=26%  Similarity=0.378  Sum_probs=200.9

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      .+.+.||.|++|+||+|... .++..+++|++.... ....+.+.+|++.+++++|+||+++++.+..++..++|+|+++
T Consensus         4 ~~~~~lg~g~~~~v~~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~   82 (267)
T cd06610           4 ELIEVIGVGATAVVYAAICL-PNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLS   82 (267)
T ss_pred             eeeeeecCCCCeEEEEEEEc-CCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccC
Confidence            45678999999999999754 356789999986532 2355789999999999999999999999999999999999999


Q ss_pred             CCCccccccCC---CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC-
Q 003836          583 NGTVASFLFGD---SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH-  658 (792)
Q Consensus       583 ~gsL~~~l~~~---~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~-  658 (792)
                      +++|.+++...   ..+++.....++.|++.||+|||+.   +++|+||+|+||++++++.+||+|||++......... 
T Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~  159 (267)
T cd06610          83 GGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRT  159 (267)
T ss_pred             CCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcccc
Confidence            99999999764   4588999999999999999999998   9999999999999999999999999999876543332 


Q ss_pred             --ccccccccCCcccccccccC-CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          659 --TNTAIRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       659 --~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                        ......++..|+|||.+... .++.++|+|||||++|||++|+.||........   ....    ... .     .+.
T Consensus       160 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~---~~~~----~~~-~-----~~~  226 (267)
T cd06610         160 RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKV---LMLT----LQN-D-----PPS  226 (267)
T ss_pred             ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhh---HHHH----hcC-C-----CCC
Confidence              22334588999999998776 789999999999999999999999965432110   0000    000 0     000


Q ss_pred             hcccC-CHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          736 LEAMN-NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       736 ~~~~~-~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ..... ....+..+.+++.+||+.+|++||++++|++
T Consensus       227 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~  263 (267)
T cd06610         227 LETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK  263 (267)
T ss_pred             cCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            11100 1244577889999999999999999999987

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=2.8e-33  Score=296.87  Aligned_cols=260  Identities=22%  Similarity=0.296  Sum_probs=192.9

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      ..+.||+|++|.||+|+.. .+++.+|||++....  ......+.+|++++++++||||+++++++.+.+..++||||+.
T Consensus         4 ~~~~l~~g~~~~v~~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   82 (284)
T cd07860           4 KVEKIGEGTYGVVYKARNK-LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH   82 (284)
T ss_pred             eeeeecCCCceEEEEEEEC-CCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc
Confidence            3467999999999999754 456789999886432  2234678999999999999999999999999999999999996


Q ss_pred             CCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          583 NGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       583 ~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                       ++|.+++...  ..+++..+..++.|++.||+|||+.   +++|+||+|+||++++++.+||+|||+++....... ..
T Consensus        83 -~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~-~~  157 (284)
T cd07860          83 -QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TY  157 (284)
T ss_pred             -cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCcc-cc
Confidence             5888888553  5678999999999999999999998   999999999999999999999999999876543221 12


Q ss_pred             ccccccCCcccccccccCC-CCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHH-------HHhhcc-----cc
Q 003836          661 TAIRGTKGYVAPEWFRNMP-ITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWA-------YDRYQE-----RT  727 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~-~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~-------~~~~~~-----~~  727 (792)
                      ....+++.|+|||.+.+.. ++.++||||||+++|||+||+.||................       +.....     ..
T Consensus       158 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (284)
T cd07860         158 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPS  237 (284)
T ss_pred             ccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhh
Confidence            2234678999999887644 6889999999999999999999986543221110000000       000000     00


Q ss_pred             hhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          728 LEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       728 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ........... .......++.+++.+||+.||++||+++++++
T Consensus       238 ~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  280 (284)
T cd07860         238 FPKWARQDFSK-VVPPLDEDGRDLLSQMLHYDPNKRISAKAALA  280 (284)
T ss_pred             cccccccCHHH-HcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence            00000000000 01123456789999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=2.1e-33  Score=293.44  Aligned_cols=247  Identities=27%  Similarity=0.324  Sum_probs=201.9

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      .+.+.||.|+||.||++... .+++.+|+|.+....   ....+.+.+|++++++++||||+++++++.+++..++|+||
T Consensus         3 ~~~~~i~~g~~~~v~~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   81 (258)
T cd05578           3 ELLRVIGKGAFGKVCIVQKR-DTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDL   81 (258)
T ss_pred             eEEEEeccCCCceEEEEEEc-cCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeC
Confidence            34578999999999999754 456789999987532   23457899999999999999999999999999999999999


Q ss_pred             ccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          581 MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       581 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +++++|.+++.....+++..+..++.||++||.|||+.   +++|+||+|+||++++++.++|+|||.+.......  ..
T Consensus        82 ~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~--~~  156 (258)
T cd05578          82 LLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT--LT  156 (258)
T ss_pred             CCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCCc--cc
Confidence            99999999998777889999999999999999999998   99999999999999999999999999988764332  22


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ....++..|+|||.+.+..++.++|+||||+++|+|++|+.||............     ..         ... .....
T Consensus       157 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~-----~~---------~~~-~~~~~  221 (258)
T cd05578         157 TSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIR-----AK---------QET-ADVLY  221 (258)
T ss_pred             cccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHH-----HH---------hcc-ccccC
Confidence            3345788999999998888999999999999999999999999765432111100     00         000 11222


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCH--HhHHH
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRPTM--RKVTQ  771 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RPs~--~evl~  771 (792)
                      +...+..+.+++.+||+.+|.+||++  +|+++
T Consensus       222 ~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~  254 (258)
T cd05578         222 PATWSTEAIDAINKLLERDPQKRLGDNLKDLKN  254 (258)
T ss_pred             cccCcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence            33445788899999999999999999  66553

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=3.4e-33  Score=295.94  Aligned_cols=247  Identities=24%  Similarity=0.362  Sum_probs=193.0

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhccc-CCCCcccccceecc------CCceE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDE------GQNRL  575 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~------~~~~~  575 (792)
                      +.+.+.||.|+||.||+|... ..++.+|+|++... .....++..|+.++.++ +|+||+++++++..      ....+
T Consensus        18 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~   95 (282)
T cd06636          18 FELVEVVGNGTYGQVYKGRHV-KTGQLAAIKVMDVT-EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLW   95 (282)
T ss_pred             hhhheeeccCCCeEEEEEEEc-CCCcEEEEEEEecC-hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEE
Confidence            344578999999999999764 45678999988654 23346788999999998 79999999999853      45789


Q ss_pred             EEEEeccCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCcccc
Q 003836          576 LVYEFMSNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT  653 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~  653 (792)
                      ++|||+++|+|.+++...  ..+++..+..++.||+.||+|||+.   +|+|+||+|+||++++++.++|+|||+++...
T Consensus        96 iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~  172 (282)
T cd06636          96 LVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD  172 (282)
T ss_pred             EEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCcchhhhh
Confidence            999999999999998653  4577888899999999999999998   99999999999999999999999999987653


Q ss_pred             CCCCCccccccccCCcccccccc-----cCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccch
Q 003836          654 LDQSHTNTAIRGTKGYVAPEWFR-----NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTL  728 (792)
Q Consensus       654 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  728 (792)
                      .... ......|++.|+|||.+.     ...++.++|||||||++|||++|+.||..........               
T Consensus       173 ~~~~-~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~---------------  236 (282)
T cd06636         173 RTVG-RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF---------------  236 (282)
T ss_pred             cccc-CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh---------------
Confidence            2221 122345889999999885     3468889999999999999999999996532211100               


Q ss_pred             hHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          729 EALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       729 ~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                       .+.............+..+.+++.+||+.+|.+||++.|+++
T Consensus       237 -~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         237 -LIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             -hHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence             000000011111234567899999999999999999999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=4.9e-33  Score=295.53  Aligned_cols=253  Identities=26%  Similarity=0.357  Sum_probs=195.6

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccccc-cchHHHHHHHHHhcccCCCCcccccceecc--CCceEEEEEec
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLLGYCDE--GQNRLLVYEFM  581 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~--~~~~~lV~E~~  581 (792)
                      +.+.||.|++|.||++... ..++.+|+|.+..... .....+.+|++++++++|+||+++++++.+  .+..++||||+
T Consensus         5 ~~~~lg~g~~~~v~~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~   83 (287)
T cd06621           5 ELSRLGEGAGGSVTKCRLK-NTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYC   83 (287)
T ss_pred             EEEEeccCCceEEEEEEEC-CCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEec
Confidence            3468999999999999764 3567899999875432 345779999999999999999999998854  34689999999


Q ss_pred             cCCCccccccC----CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC
Q 003836          582 SNGTVASFLFG----DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       582 ~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      ++++|.+++..    ...+++..+..++.||+.||+|||+.   +++|+||+|+||++++++.++|+|||++........
T Consensus        84 ~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~  160 (287)
T cd06621          84 EGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLA  160 (287)
T ss_pred             CCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccccccccccc
Confidence            99999988643    34578889999999999999999998   999999999999999999999999999876532211


Q ss_pred             CccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhh-hhhhHHHHHHHhhcccchhHhhhchh
Q 003836          658 HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKV-DKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       658 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                         ....++..|+|||.+.+..++.++||||||+++|||++|+.||....... .......+...    .....+ ... 
T Consensus       161 ---~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~-  231 (287)
T cd06621         161 ---GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVN----MPNPEL-KDE-  231 (287)
T ss_pred             ---ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhc----CCchhh-ccC-
Confidence               23346889999999999999999999999999999999999997552210 00001111000    000000 000 


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                       ........+.+.+++.+||+.+|++|||+.||++
T Consensus       232 -~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~  265 (287)
T cd06621         232 -PGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE  265 (287)
T ss_pred             -CCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence             0001124567899999999999999999999998

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=4.7e-33  Score=300.09  Aligned_cols=252  Identities=25%  Similarity=0.320  Sum_probs=197.6

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccc---cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ---DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +...+.||+|+||.||+++.. .++..+|+|++.....   ...+.+.+|++++++++|+|++++++++.++...++|||
T Consensus        27 f~~~~~lg~G~~~~v~~~~~~-~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  105 (317)
T cd06635          27 FTDLREIGHGSFGAVYFARDV-RTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME  105 (317)
T ss_pred             hhhhheeccCCCeEEEEEEEc-CCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence            445678999999999999754 3467899999864322   234578899999999999999999999999999999999


Q ss_pred             eccCCCccccccC-CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          580 FMSNGTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       580 ~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      |+++ +|.+.+.. ...+++..+..++.||+.||.|||+.   +|+|+||+|+||+++.++.+||+|||++.....    
T Consensus       106 ~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~----  177 (317)
T cd06635         106 YCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASP----  177 (317)
T ss_pred             CCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCC----
Confidence            9975 77776654 45689999999999999999999998   999999999999999999999999999875432    


Q ss_pred             ccccccccCCcccccccc---cCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          659 TNTAIRGTKGYVAPEWFR---NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~---~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                       .....+++.|+|||.+.   ...++.++|||||||++|||++|+.||........   .             ..+....
T Consensus       178 -~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~---~-------------~~~~~~~  240 (317)
T cd06635         178 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA---L-------------YHIAQNE  240 (317)
T ss_pred             -cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH---H-------------HHHHhcc
Confidence             12345788999999974   45789999999999999999999999865321110   0             0000111


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCCC
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP  780 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~~  780 (792)
                      ............+.+++.+||+.+|.+||++.+|++.+.-....+
T Consensus       241 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~  285 (317)
T cd06635         241 SPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERP  285 (317)
T ss_pred             CCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCc
Confidence            111112234567889999999999999999999998765544433

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=4.1e-33  Score=295.74  Aligned_cols=262  Identities=22%  Similarity=0.251  Sum_probs=198.3

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccC--CceEEEEEe
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEG--QNRLLVYEF  580 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~--~~~~lV~E~  580 (792)
                      +.++||+|++|.||+|... ..++.+|+|++....  ......+.+|++++++++|+|++++++++.+.  +..++|+||
T Consensus         3 ~~~~l~~g~~~~vy~~~~~-~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~   81 (287)
T cd07840           3 KIAQIGEGTYGQVYKARNK-KTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEY   81 (287)
T ss_pred             eeEEeccCCCeEEEEEEEC-CCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEecc
Confidence            4567999999999999764 446789999998653  33446788999999999999999999999888  889999999


Q ss_pred             ccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          581 MSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       581 ~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      +++ +|.+++... ..+++..+..++.||++||+|||+.   +++|+||+|+||++++++.+||+|||++..........
T Consensus        82 ~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~  157 (287)
T cd07840          82 MDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSAD  157 (287)
T ss_pred             ccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCCCccc
Confidence            985 888888665 5789999999999999999999998   99999999999999999999999999998765543322


Q ss_pred             cccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHH----Hhhccc-ch--h--
Q 003836          660 NTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAY----DRYQER-TL--E--  729 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~----~~~~~~-~~--~--  729 (792)
                      .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||...........+.....    ..+... .+  .  
T Consensus       158 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (287)
T cd07840         158 YTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFEN  237 (287)
T ss_pred             ccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhh
Confidence            333456888999998764 4689999999999999999999999975443211111100000    000000 00  0  


Q ss_pred             ----HhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          730 ----ALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       730 ----~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                          ......+.......++..+.+++.+||+.+|.+||+++++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         238 LKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             ccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence                000000000011113678899999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.6e-33  Score=294.88  Aligned_cols=247  Identities=24%  Similarity=0.341  Sum_probs=197.1

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccC---CCCcccccceeccCCceEEEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTH---HKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~---h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      .+.+.||+|+||.||+|... .+++.+++|.+.... ....+++.+|+.++++++   |+|++++++++.++...++|||
T Consensus         4 ~~~~~l~~g~~g~v~~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e   82 (277)
T cd06917           4 QRLELIGRGAYGAVYRGKHV-PTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIME   82 (277)
T ss_pred             hhhhheeccCCceEEEEEEc-CCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEe
Confidence            44578999999999999764 456789999986542 334567889999999986   9999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      |+++++|.+++.. ..+++.....++.|++.||.|||+.   +|+|+||+|+||++++++.++|+|||++........ .
T Consensus        83 ~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-~  157 (277)
T cd06917          83 YAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS-K  157 (277)
T ss_pred             cCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc-c
Confidence            9999999999865 4688999999999999999999998   999999999999999999999999999987654332 2


Q ss_pred             cccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          660 NTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      .....|+..|+|||.+.+ ..++.++||||||+++|+|++|+.||.........        ......     ..+.+. 
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~--------~~~~~~-----~~~~~~-  223 (277)
T cd06917         158 RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAM--------MLIPKS-----KPPRLE-  223 (277)
T ss_pred             cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhh--------hccccC-----CCCCCC-
Confidence            233468889999999875 45789999999999999999999999654221100        000000     000111 


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                        ......++.+++.+||+.+|++||++.|++..
T Consensus       224 --~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~  255 (277)
T cd06917         224 --DNGYSKLLREFVAACLDEEPKERLSAEELLKS  255 (277)
T ss_pred             --cccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence              11145678899999999999999999999873

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-33  Score=278.55  Aligned_cols=265  Identities=23%  Similarity=0.325  Sum_probs=206.6

Q ss_pred             CHHHHHHHHhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccC-CCCcccccceeccCC
Q 003836          494 TYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH-HKNLVRLLGYCDEGQ  572 (792)
Q Consensus       494 ~~~el~~~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~g~~~~~~  572 (792)
                      ++.|+.+.|.   +.||+|+|+.|--++ ...++..+|||++.+.......++.+|++++...+ |+||++|+.+|+++.
T Consensus        74 ~F~d~YkLt~---e~LGeGAyasVqtcv-~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~  149 (463)
T KOG0607|consen   74 KFEDMYKLTS---ELLGEGAYASVQTCV-SIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT  149 (463)
T ss_pred             hHHHHHHhHH---HHhcCccceeeeeee-eeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc
Confidence            4666666554   679999999998874 45677899999999887777889999999999985 999999999999999


Q ss_pred             ceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCC---CeEEeecCCC
Q 003836          573 NRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY---NARISDFGLA  649 (792)
Q Consensus       573 ~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~---~~kl~Dfg~a  649 (792)
                      ..|||||-|.+|+|..++..++.+++....++..+|+.||.|||.+   +|.||||||+|||-.+-.   -+||+||.++
T Consensus       150 ~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiCDfDLg  226 (463)
T KOG0607|consen  150 RFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKICDFDLG  226 (463)
T ss_pred             eEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeeeccccc
Confidence            9999999999999999999999999999999999999999999999   999999999999997543   4899999887


Q ss_pred             ccccCCC--C----CccccccccCCcccccccc-----cCCCCcccceehHHHHHHHHHhcCcCCCcchhhh---hhhhH
Q 003836          650 KLLTLDQ--S----HTNTAIRGTKGYVAPEWFR-----NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKV---DKAIL  715 (792)
Q Consensus       650 ~~~~~~~--~----~~~~~~~gt~~y~aPE~~~-----~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~---~~~~~  715 (792)
                      .-.....  +    ....+.+|+..|||||+..     ..-|+.+.|.||||||||-|++|..||.......   +....
T Consensus       227 Sg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~  306 (463)
T KOG0607|consen  227 SGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEV  306 (463)
T ss_pred             cccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCc
Confidence            6433221  1    1223457888999999863     3468899999999999999999999997654311   00000


Q ss_pred             HHHHHHhhcccchhHhhhchhcccCC----HHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          716 TDWAYDRYQERTLEALVENDLEAMNN----VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       716 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ....+.    ...+.+.+...+  ++    ...+.+..+++...+..++.+|.++.++++
T Consensus       307 Cr~CQ~----~LFesIQEGkYe--FPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln  360 (463)
T KOG0607|consen  307 CRVCQN----KLFESIQEGKYE--FPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN  360 (463)
T ss_pred             cHHHHH----HHHHHHhccCCc--CChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence            010111    111111111111  12    134677788999999999999999998887

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=4.4e-33  Score=296.80  Aligned_cols=263  Identities=19%  Similarity=0.227  Sum_probs=196.8

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccc--cchHHHHHHHHHhcccCCCCcccccceeccC--CceEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ--DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEG--QNRLLVY  578 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~--~~~~lV~  578 (792)
                      +.+.+.||+|++|.||+|... .+++.+++|.++....  .....+.+|+.++++++||||+++++++...  ...++||
T Consensus         7 y~~~~~lg~g~~~~v~~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~   85 (293)
T cd07843           7 YEKLNRIEEGTYGVVYRARDK-KTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVM   85 (293)
T ss_pred             hhhhhhhcCCCCeEEEEEEEC-CCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEe
Confidence            445678999999999999764 4567899999875332  2234678899999999999999999998777  8899999


Q ss_pred             EeccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC
Q 003836          579 EFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       579 E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      ||+++ +|.+++... ..+++..+..++.||+.||+|||+.   +++|+||||+|||++.++.+||+|||+++.......
T Consensus        86 e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~  161 (293)
T cd07843          86 EYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLK  161 (293)
T ss_pred             hhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeeccCCcc
Confidence            99985 898888654 4589999999999999999999998   999999999999999999999999999987654321


Q ss_pred             CccccccccCCcccccccccC-CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH-------HHHhhcc----
Q 003836          658 HTNTAIRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW-------AYDRYQE----  725 (792)
Q Consensus       658 ~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~-------~~~~~~~----  725 (792)
                       ......+++.|+|||.+.+. .++.++||||||+++|||++|+.||...........+...       .+..+.+    
T Consensus       162 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (293)
T cd07843         162 -PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGA  240 (293)
T ss_pred             -ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchh
Confidence             12233468899999998754 4689999999999999999999999754332111111000       0000000    


Q ss_pred             --cchhHhhhchhcccCCHH-HHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          726 --RTLEALVENDLEAMNNVT-MLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       726 --~~~~~~~~~~~~~~~~~~-~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                        ..........+....+.. ..+.+.+++.+||+.+|++|||+.|+++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~  289 (293)
T cd07843         241 KKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK  289 (293)
T ss_pred             cccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence              000001111111112222 3667889999999999999999999987

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=5.5e-33  Score=298.15  Aligned_cols=244  Identities=27%  Similarity=0.342  Sum_probs=193.4

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccc---cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ---DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +...+.||+|+||+||+|... .+++.||+|++.....   ...+++.+|++++++++||||++++++|.+.+..++|+|
T Consensus        17 y~~~~~lg~g~~g~vy~~~~~-~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e   95 (307)
T cd06607          17 FTDLREIGHGSFGAVYFARDV-RTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVME   95 (307)
T ss_pred             hhhheeecCCCCeEEEEEEEc-CCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHH
Confidence            445578999999999999754 4467899998864322   234578899999999999999999999999999999999


Q ss_pred             eccCCCccccccC-CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          580 FMSNGTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       580 ~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      |++ |+|.+++.. ...+++..+..++.|++.||.|||+.   +|+|+||+|+||++++++.+||+|||++......   
T Consensus        96 ~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~---  168 (307)
T cd06607          96 YCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA---  168 (307)
T ss_pred             hhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCCC---
Confidence            997 467666643 45689999999999999999999998   9999999999999999999999999998765322   


Q ss_pred             ccccccccCCcccccccc---cCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          659 TNTAIRGTKGYVAPEWFR---NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~---~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                        ....+++.|+|||.+.   ...++.++||||||+++|||++|+.||.........       ..         +....
T Consensus       169 --~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~-------~~---------~~~~~  230 (307)
T cd06607         169 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL-------YH---------IAQND  230 (307)
T ss_pred             --CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHH-------HH---------HhcCC
Confidence              2335788999999874   456889999999999999999999998654221100       00         00000


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ............+.+++.+||+.+|++||++.+|+..
T Consensus       231 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  267 (307)
T cd06607         231 SPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH  267 (307)
T ss_pred             CCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            0111122345678999999999999999999999874

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=6.2e-33  Score=294.59  Aligned_cols=247  Identities=26%  Similarity=0.360  Sum_probs=200.8

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      .+.+.||+|++|.||++.... ++..+++|++..... ..+.+.+|++.+++++|+|++++++.+...+..++|+||+++
T Consensus        22 ~~~~~l~~g~~~~v~~~~~~~-~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   99 (286)
T cd06614          22 KNLEKIGEGASGEVYKATDRA-TGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDG   99 (286)
T ss_pred             hHhHhccCCCCeEEEEEEEcc-CCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCC
Confidence            345689999999999997653 457899999876543 567889999999999999999999999999999999999999


Q ss_pred             CCccccccCCC-CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          584 GTVASFLFGDS-KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       584 gsL~~~l~~~~-~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      ++|.+++.... .+++..+..++.|++.||+|||+.   +|+|+||+|+||+++.++.++|+|||++........ ....
T Consensus       100 ~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~~~~  175 (286)
T cd06614         100 GSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS-KRNS  175 (286)
T ss_pred             CcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhccchh-hhcc
Confidence            99999998776 889999999999999999999998   999999999999999999999999999876543222 1223


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhc-ccCC
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLE-AMNN  741 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  741 (792)
                      ..++..|+|||.+.+..++.++||||||+++|+|++|+.|+..........   .             ....... ....
T Consensus       176 ~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~---~-------------~~~~~~~~~~~~  239 (286)
T cd06614         176 VVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALF---L-------------ITTKGIPPLKNP  239 (286)
T ss_pred             ccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHH---H-------------HHhcCCCCCcch
Confidence            347889999999988889999999999999999999999986532211100   0             0000000 0111


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          742 VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       742 ~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ......+.+++.+||+.+|.+||++.++++.
T Consensus       240 ~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~  270 (286)
T cd06614         240 EKWSPEFKDFLNKCLVKDPEKRPSAEELLQH  270 (286)
T ss_pred             hhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence            1245678899999999999999999999873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=6.3e-33  Score=287.85  Aligned_cols=246  Identities=25%  Similarity=0.383  Sum_probs=202.0

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCC
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNG  584 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~g  584 (792)
                      ..+.||+|++|.||++.... +++.+++|++........+.+.+|++.+++++|+|++++++++......++++||++++
T Consensus         4 ~~~~l~~g~~~~v~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~   82 (253)
T cd05122           4 ILEKIGKGGFGEVYKARHKR-TGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGG   82 (253)
T ss_pred             eeeeeccCCceEEEEEEECC-CCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCC
Confidence            34679999999999997653 46789999998765556788999999999999999999999999999999999999999


Q ss_pred             CccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccccc
Q 003836          585 TVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAI  663 (792)
Q Consensus       585 sL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  663 (792)
                      +|.+++... ..+++..+..++.|++.||+|||+.   +++|+||+|+||++++++.++|+|||.+........  ....
T Consensus        83 ~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--~~~~  157 (253)
T cd05122          83 SLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--RNTM  157 (253)
T ss_pred             cHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccccccccc--ccce
Confidence            999999776 6789999999999999999999998   999999999999999999999999999987654332  2345


Q ss_pred             cccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHH
Q 003836          664 RGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVT  743 (792)
Q Consensus       664 ~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  743 (792)
                      .++..|+|||.+.+..++.++||||||+++++|++|+.|+............        .......+       .....
T Consensus       158 ~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~--------~~~~~~~~-------~~~~~  222 (253)
T cd05122         158 VGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKI--------ATNGPPGL-------RNPEK  222 (253)
T ss_pred             ecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHH--------HhcCCCCc-------Ccccc
Confidence            5788999999998888999999999999999999999998754221110000        00000000       01111


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          744 MLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       744 ~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ....+.+++.+||+.+|++|||+.|+++
T Consensus       223 ~~~~~~~~i~~~l~~~p~~R~t~~~~l~  250 (253)
T cd05122         223 WSDEFKDFLKKCLQKNPEKRPTAEQLLK  250 (253)
T ss_pred             cCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            2567889999999999999999999987

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=3.9e-33  Score=295.59  Aligned_cols=259  Identities=22%  Similarity=0.275  Sum_probs=195.3

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.++||+|++|.||+|... .++..+++|++....  ....+.+.+|++++++++|+|++++++++.+++..++||||++
T Consensus         3 ~~~~l~~g~~~~vy~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~   81 (283)
T cd07835           3 KVEKIGEGTYGVVYKARDK-LTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD   81 (283)
T ss_pred             hheEecCCCCeEEEEEEEc-CCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC
Confidence            4568999999999999764 356789999986543  2234678899999999999999999999999999999999995


Q ss_pred             CCCccccccCCC--CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          583 NGTVASFLFGDS--KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       583 ~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                       ++|.+++....  .+++..+..++.|+++||+|||+.   +++|+||+|+||+++.++.++|+|||+++....... ..
T Consensus        82 -~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~-~~  156 (283)
T cd07835          82 -LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR-TY  156 (283)
T ss_pred             -cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc-cc
Confidence             68999987654  689999999999999999999998   999999999999999999999999999976543221 11


Q ss_pred             ccccccCCcccccccccC-CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH-------HHHhhcccchhHhh
Q 003836          661 TAIRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW-------AYDRYQERTLEALV  732 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~  732 (792)
                      ....++..|+|||.+.+. .++.++||||||+++|||++|+.||...............       .+...  ..+..+.
T Consensus       157 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  234 (283)
T cd07835         157 THEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGV--TSLPDYK  234 (283)
T ss_pred             CccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhh--hhchhhh
Confidence            223468899999988654 5789999999999999999999998654322111110000       00000  0000000


Q ss_pred             hch------hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          733 END------LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       733 ~~~------~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ...      .........+..+.+++.+||+.+|++||+++|+++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         235 PTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             hhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            000      000011223467889999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.8e-33  Score=320.55  Aligned_cols=267  Identities=18%  Similarity=0.277  Sum_probs=186.5

Q ss_pred             HHhhhhhhcCccccceEEEeeecCCCceEEEEE------------------EcccccccchHHHHHHHHHhcccCCCCcc
Q 003836          501 VTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVK------------------KLNSVFQDSEKEFKAEVNGIGQTHHKNLV  562 (792)
Q Consensus       501 ~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK------------------~~~~~~~~~~~~~~~Ei~~l~~l~h~niv  562 (792)
                      ..+.+.++||+|+||+||++.+....+...++|                  ++. ........+.+|+.++++++|+||+
T Consensus       148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~Ei~il~~l~HpnIv  226 (501)
T PHA03210        148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVK-AGSRAAIQLENEILALGRLNHENIL  226 (501)
T ss_pred             hccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhh-cchHHHHHHHHHHHHHHhCCCCCcC
Confidence            345667889999999999987643333222222                  111 1122345688999999999999999


Q ss_pred             cccceeccCCceEEEEEeccCCCccccccCC-----CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC
Q 003836          563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFGD-----SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD  637 (792)
Q Consensus       563 ~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~  637 (792)
                      ++++++.+.+..++|+|++.. +|.+++...     ..........|+.||+.||.|||+.   +|+||||||+|||++.
T Consensus       227 ~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl~~  302 (501)
T PHA03210        227 KIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLNC  302 (501)
T ss_pred             cEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECC
Confidence            999999999999999999864 666666432     2234566778999999999999998   9999999999999999


Q ss_pred             CCCeEEeecCCCccccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCC-CcchhhhhhhhHH
Q 003836          638 HYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNI-DNEISKVDKAILT  716 (792)
Q Consensus       638 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~-~~~~~~~~~~~~~  716 (792)
                      ++.+||+|||+++.+............||..|+|||.+.+..++.++|||||||++|||++|+.++ .............
T Consensus       303 ~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~  382 (501)
T PHA03210        303 DGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLK  382 (501)
T ss_pred             CCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHH
Confidence            999999999999877544333334457999999999999999999999999999999999998643 2221111100000


Q ss_pred             HH-----HHHhhccc--chhHhhhchhcccC---------CHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          717 DW-----AYDRYQER--TLEALVENDLEAMN---------NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       717 ~~-----~~~~~~~~--~~~~~~~~~~~~~~---------~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ..     ....+.+.  .+..+++.......         ......++.+++.+||+.||.+|||+.|++++
T Consensus       383 ~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h  454 (501)
T PHA03210        383 IIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL  454 (501)
T ss_pred             HHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence            00     00000000  01111110000000         00123456778999999999999999999873

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.8e-33  Score=292.55  Aligned_cols=248  Identities=25%  Similarity=0.352  Sum_probs=194.8

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhccc-CCCCcccccceeccCC------ceE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQ------NRL  575 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~------~~~  575 (792)
                      +.+.+.||+|++|.||+|... .+++.+++|++.... ...+.+.+|+.+++++ +|+||+++++++....      ..+
T Consensus         8 y~~~~~l~~g~~~~v~~~~~~-~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~   85 (275)
T cd06608           8 FELVEVIGEGTYGKVYKARHK-KTGQLVAIKIMDIIE-DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLW   85 (275)
T ss_pred             eeheeeecCCCCeEEEEEEEC-CCCcEEEEEEEecCc-hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEE
Confidence            445678999999999999764 346789999887543 3456799999999999 7999999999996544      489


Q ss_pred             EEEEeccCCCccccccC----CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCcc
Q 003836          576 LVYEFMSNGTVASFLFG----DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKL  651 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~  651 (792)
                      +||||+++++|.+++..    +..+++..+..++.|++.||.|||+.   +++|+||+|+||++++++.+||+|||++..
T Consensus        86 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~  162 (275)
T cd06608          86 LVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFGVSAQ  162 (275)
T ss_pred             EEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCCcccee
Confidence            99999999999998864    34688999999999999999999998   999999999999999999999999999876


Q ss_pred             ccCCCCCccccccccCCccccccccc-----CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhccc
Q 003836          652 LTLDQSHTNTAIRGTKGYVAPEWFRN-----MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQER  726 (792)
Q Consensus       652 ~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~  726 (792)
                      ..... .......++..|+|||.+..     ..++.++||||||++++||++|+.||........   +..     ....
T Consensus       163 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~~~-----~~~~  233 (275)
T cd06608         163 LDSTL-GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRA---LFK-----IPRN  233 (275)
T ss_pred             cccch-hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHH---HHH-----hhcc
Confidence            54322 12223458889999998753     3477899999999999999999999964322111   000     0000


Q ss_pred             chhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          727 TLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       727 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .       ......+....+++.+++.+||+.||++|||+.++++
T Consensus       234 ~-------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         234 P-------PPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             C-------CCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            0       0011112235678889999999999999999999987

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=5.1e-33  Score=296.02  Aligned_cols=259  Identities=19%  Similarity=0.283  Sum_probs=192.7

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccc-cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      .+.+.||+|++|.||+|... .+++.||+|.+..... .....+.+|++++++++|+||+++++++.+.+..++||||++
T Consensus         8 ~~~~~lg~g~~~~vy~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   86 (291)
T cd07844           8 KKLDKLGEGSYATVYKGRSK-LTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLD   86 (291)
T ss_pred             eEEEEEeecCCeEEEEEEEc-CCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCC
Confidence            34578999999999999754 4467899999865432 233567889999999999999999999999999999999998


Q ss_pred             CCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          583 NGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       583 ~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      + +|.+++... ..+++.....++.|++.||.|||+.   +|+|+||||+||+++.++.+||+|||+++....... ...
T Consensus        87 ~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~-~~~  161 (291)
T cd07844          87 T-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK-TYS  161 (291)
T ss_pred             C-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCCCc-ccc
Confidence            5 899888654 4678899999999999999999998   999999999999999999999999999875432211 112


Q ss_pred             cccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcc---cchhHh------
Q 003836          662 AIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQE---RTLEAL------  731 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~------  731 (792)
                      ...++..|+|||.+.+ ..++.++||||||+++|||++|+.||.......+....   .......   ......      
T Consensus       162 ~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  238 (291)
T cd07844         162 NEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHK---IFRVLGTPTEETWPGVSSNPEF  238 (291)
T ss_pred             ccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHH---HHHhcCCCChhhhhhhhhcccc
Confidence            2346788999998865 55899999999999999999999999654321111100   0000000   000000      


Q ss_pred             h--------hchhccc-CCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          732 V--------ENDLEAM-NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       732 ~--------~~~~~~~-~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .        ...+... ........+.+++.+||+.+|++|||+.|+++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         239 KPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             ccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence            0        0000000 00111267789999999999999999999886

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=6.1e-33  Score=289.49  Aligned_cols=246  Identities=22%  Similarity=0.346  Sum_probs=197.0

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .+.+.||+|+||.||++... .++..+|+|.+....  ....+.+.+|+.++++++|+||+++++.+.+....++|+||+
T Consensus         3 ~~~~~l~~g~~~~v~~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   81 (257)
T cd08225           3 EIIKKIGEGSFGKIYLAKAK-SDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYC   81 (257)
T ss_pred             eEEEEecCCCcceEEEEEEc-CCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecC
Confidence            34578999999999999765 445689999986532  234567889999999999999999999999999999999999


Q ss_pred             cCCCccccccCCC--CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCC-eEEeecCCCccccCCCCC
Q 003836          582 SNGTVASFLFGDS--KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYN-ARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       582 ~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~-~kl~Dfg~a~~~~~~~~~  658 (792)
                      ++++|.+++....  .+++..+..++.|++.||.|||+.   +++|+||||+||++++++. +||+|||.+........ 
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~-  157 (257)
T cd08225          82 DGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME-  157 (257)
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCCcc-
Confidence            9999999986543  578999999999999999999998   9999999999999998864 69999999987643221 


Q ss_pred             ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          659 TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      ......|++.|+|||.+.+..++.++||||||++++||++|+.||.......       ....         ..... ..
T Consensus       158 ~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-------~~~~---------~~~~~-~~  220 (257)
T cd08225         158 LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQ-------LVLK---------ICQGY-FA  220 (257)
T ss_pred             cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH-------HHHH---------Hhccc-CC
Confidence            2223458889999999988889999999999999999999999986432110       0000         00000 01


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .........+.+++.+|++.+|++|||+.|+++
T Consensus       221 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  253 (257)
T cd08225         221 PISPNFSRDLRSLISQLFKVSPRDRPSITSILK  253 (257)
T ss_pred             CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence            112234467889999999999999999999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3e-33  Score=323.34  Aligned_cols=254  Identities=26%  Similarity=0.365  Sum_probs=207.8

Q ss_pred             hhhhhcCccccceEEEeeecCC------CceEEEEEEccccccc-chHHHHHHHHHhccc-CCCCcccccceeccCCceE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMG------SSNHVAVKKLNSVFQD-SEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRL  575 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~------~~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~  575 (792)
                      .+.+.||+|.||.|++|.....      ....||||.++..... ..+.+..|+++|..+ +|+||+.++|+|.+....+
T Consensus       299 ~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~  378 (609)
T KOG0200|consen  299 KLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLY  378 (609)
T ss_pred             cccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceE
Confidence            3456899999999999986421      1467999999865443 457899999999998 6999999999999999999


Q ss_pred             EEEEeccCCCccccccCCC----------------CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCC
Q 003836          576 LVYEFMSNGTVASFLFGDS----------------KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY  639 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~~----------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~  639 (792)
                      +|+||++.|+|.++|+..+                .+.....+.++.|||.||+||++.   ++|||||.++|||+.++.
T Consensus       379 ~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNVLi~~~~  455 (609)
T KOG0200|consen  379 VIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNVLITKNK  455 (609)
T ss_pred             EEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhEEecCCC
Confidence            9999999999999997655                377889999999999999999999   999999999999999999


Q ss_pred             CeEEeecCCCccccCCCCCccccccc--cCCcccccccccCCCCcccceehHHHHHHHHHhc-CcCCCcchhhhhhhhHH
Q 003836          640 NARISDFGLAKLLTLDQSHTNTAIRG--TKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICL-RRNIDNEISKVDKAILT  716 (792)
Q Consensus       640 ~~kl~Dfg~a~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg-~~p~~~~~~~~~~~~~~  716 (792)
                      .+||+|||+|+............-.+  ...|||||.+....|+.|+|||||||+||||+|. ..|+......       
T Consensus       456 ~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~-------  528 (609)
T KOG0200|consen  456 VIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT-------  528 (609)
T ss_pred             EEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcH-------
Confidence            99999999999655444433222222  3459999999999999999999999999999985 4555431100       


Q ss_pred             HHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          717 DWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                               ..+.+.+.+..+...+..+..++.++++.||+.+|++||++.++++.++.+
T Consensus       529 ---------~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~  579 (609)
T KOG0200|consen  529 ---------EELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH  579 (609)
T ss_pred             ---------HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence                     111224445555556667788999999999999999999999999998873

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=100.00  E-value=8.7e-33  Score=293.75  Aligned_cols=255  Identities=21%  Similarity=0.234  Sum_probs=201.1

Q ss_pred             hhhhcCccccceEEEeeec--CCCceEEEEEEccccc----ccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEE
Q 003836          505 FKEELGRGAFGTVYKGFVN--MGSSNHVAVKKLNSVF----QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLV  577 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~--~~~~~~vavK~~~~~~----~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV  577 (792)
                      +.+.||+|++|.||++...  ...++.+|||.+++..    ....+.+.+|+.++.++ +|+||+++++.+..+...++|
T Consensus         4 ~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv   83 (288)
T cd05583           4 LLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLI   83 (288)
T ss_pred             EEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEE
Confidence            4578999999999998753  2345689999986432    22345688999999999 699999999999999999999


Q ss_pred             EEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC
Q 003836          578 YEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      |||+++++|.+++.....+++..+..++.|+++||.|||+.   +++|+||+|+||+++.++.++|+|||+++.......
T Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~  160 (288)
T cd05583          84 LDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEE  160 (288)
T ss_pred             EecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECccccccccccc
Confidence            99999999999998777788999999999999999999998   999999999999999999999999999987654433


Q ss_pred             CccccccccCCcccccccccCC--CCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          658 HTNTAIRGTKGYVAPEWFRNMP--ITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       658 ~~~~~~~gt~~y~aPE~~~~~~--~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                      .......++..|+|||.+.+..  .+.++||||||++++||++|..||.........   .....         .+... 
T Consensus       161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~---~~~~~---------~~~~~-  227 (288)
T cd05583         161 ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQ---SEISR---------RILKS-  227 (288)
T ss_pred             cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchH---HHHHH---------HHHcc-
Confidence            3333456889999999987655  789999999999999999999998543211100   00000         00110 


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                       ....+......+.+++.+||+.+|++|||+.++.+.|+..
T Consensus       228 -~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~  267 (288)
T cd05583         228 -KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP  267 (288)
T ss_pred             -CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence             1112223446778999999999999999999888877653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=8.7e-33  Score=292.02  Aligned_cols=243  Identities=28%  Similarity=0.346  Sum_probs=192.9

Q ss_pred             cCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCCC
Q 003836          509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGT  585 (792)
Q Consensus       509 lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~gs  585 (792)
                      ||+|+||+||++... ..++.+|+|.+....   ......+.+|++++++++||||+++++.+...+..++||||+++++
T Consensus         1 lg~g~~g~vy~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~   79 (277)
T cd05577           1 LGKGGFGEVCACQVK-ATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGD   79 (277)
T ss_pred             CCCCCceeEEEEEEc-CCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCc
Confidence            699999999999654 456789999986432   2234567889999999999999999999999999999999999999


Q ss_pred             ccccccCCC--CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccccc
Q 003836          586 VASFLFGDS--KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAI  663 (792)
Q Consensus       586 L~~~l~~~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  663 (792)
                      |.+++....  .+++..+..++.|++.||.|||+.   +++|+||+|+||++++++.+||+|||.+......  ......
T Consensus        80 L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~  154 (277)
T cd05577          80 LKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG--KKIKGR  154 (277)
T ss_pred             HHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccC--Cccccc
Confidence            999997654  688999999999999999999998   9999999999999999999999999998765432  122234


Q ss_pred             cccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHH
Q 003836          664 RGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVT  743 (792)
Q Consensus       664 ~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  743 (792)
                      .++..|+|||.+.+..++.++||||||+++++|++|+.||...........+.    .    .    ...  .....+..
T Consensus       155 ~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~----~----~----~~~--~~~~~~~~  220 (277)
T cd05577         155 AGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELK----R----R----TLE--MAVEYPDK  220 (277)
T ss_pred             cCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHH----h----c----ccc--ccccCCcc
Confidence            57889999999988889999999999999999999999996543211110000    0    0    000  01112223


Q ss_pred             HHHHHHHHHHHccccCCCCCC-----CHHhHHH
Q 003836          744 MLHRFVMVAFWCIQEDPSHRP-----TMRKVTQ  771 (792)
Q Consensus       744 ~~~~l~~l~~~Cl~~~p~~RP-----s~~evl~  771 (792)
                      ....+.+++.+||+.+|++||     ++.++++
T Consensus       221 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  253 (277)
T cd05577         221 FSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE  253 (277)
T ss_pred             CCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence            466788999999999999999     6666664

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=1.5e-32  Score=290.86  Aligned_cols=259  Identities=20%  Similarity=0.236  Sum_probs=191.4

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccC-CCCcccccceeccC--CceEEEEEe
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTH-HKNLVRLLGYCDEG--QNRLLVYEF  580 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~-h~niv~l~g~~~~~--~~~~lV~E~  580 (792)
                      +.++||+|+||.||++... .+++.+|+|+++... ........+|+.++.++. |+|++++++++.+.  +..++|+||
T Consensus         3 ~~~~lg~g~~~~v~~~~~~-~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~   81 (282)
T cd07831           3 ILGKIGEGTFSEVLKAQSR-KTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFEL   81 (282)
T ss_pred             eEeeccccccceEEEEEEc-CCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEec
Confidence            4578999999999999754 456789999987542 222344567888999885 99999999999887  889999999


Q ss_pred             ccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          581 MSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       581 ~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      ++ ++|.+++... ..+++..+..++.||+.||+|||+.   +++|+||+|+||+++. +.+||+|||+++.......  
T Consensus        82 ~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~--  154 (282)
T cd07831          82 MD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP--  154 (282)
T ss_pred             CC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccccCCC--
Confidence            97 4787777653 5689999999999999999999998   9999999999999999 9999999999987643222  


Q ss_pred             cccccccCCcccccccc-cCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH-------HHHhhcccchhHh
Q 003836          660 NTAIRGTKGYVAPEWFR-NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW-------AYDRYQERTLEAL  731 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~-~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~  731 (792)
                      .....++..|+|||.+. +..++.++|||||||++|||++|..||...............       .............
T Consensus       155 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (282)
T cd07831         155 YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNY  234 (282)
T ss_pred             cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccc
Confidence            12345788999999764 456789999999999999999999999654322110000000       0000000000000


Q ss_pred             hhchhcc----cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          732 VENDLEA----MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       732 ~~~~~~~----~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ..+....    ......+..+.+++.+||+.+|++||+++++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         235 NFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR  278 (282)
T ss_pred             cCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence            0000000    001234678999999999999999999999987

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.9e-33  Score=294.74  Aligned_cols=248  Identities=21%  Similarity=0.294  Sum_probs=196.3

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccc--ccccchHHHHHHHHHhcccC-CCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNS--VFQDSEKEFKAEVNGIGQTH-HKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~--~~~~~~~~~~~Ei~~l~~l~-h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +...++||+||.+.||++..  .+.+.+|+|++..  .+.+...-|.+|+..|.+|+ |.+||+|++|-..++.+|||||
T Consensus       363 Yeilk~iG~GGSSkV~kV~~--s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE  440 (677)
T KOG0596|consen  363 YEILKQIGSGGSSKVFKVLN--SDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME  440 (677)
T ss_pred             hhHHHhhcCCCcceeeeeec--CCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence            44567899999999999853  2345788887654  33445678999999999995 9999999999999999999999


Q ss_pred             eccCCCccccccCCCC-CchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          580 FMSNGTVASFLFGDSK-PNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~-l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      |=+- +|..+|..... ...-.+..+..|++.++.++|++   ||||.||||.|+|+-. |.+||+|||+|.....+...
T Consensus       441 ~Gd~-DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DTTs  515 (677)
T KOG0596|consen  441 CGDI-DLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVK-GRLKLIDFGIANAIQPDTTS  515 (677)
T ss_pred             cccc-cHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEe-eeEEeeeechhcccCccccc
Confidence            8754 89999977643 33237888999999999999999   9999999999999875 58999999999988766554


Q ss_pred             c-cccccccCCcccccccccC-----------CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhccc
Q 003836          659 T-NTAIRGTKGYVAPEWFRNM-----------PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQER  726 (792)
Q Consensus       659 ~-~~~~~gt~~y~aPE~~~~~-----------~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~  726 (792)
                      . ....+||+.||+||.+...           ..++++||||+|||||+|+.|+.||......               ..
T Consensus       516 I~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~---------------~a  580 (677)
T KOG0596|consen  516 IVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQ---------------IA  580 (677)
T ss_pred             eeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHH---------------HH
Confidence            3 3456899999999988432           3678999999999999999999999643211               12


Q ss_pred             chhHhhhchhcccCCHH-HHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          727 TLEALVENDLEAMNNVT-MLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       727 ~~~~~~~~~~~~~~~~~-~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ++..+.++..+-+++.. .-.++++++..||+.||.+||++.|+++.
T Consensus       581 Kl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh  627 (677)
T KOG0596|consen  581 KLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH  627 (677)
T ss_pred             HHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence            34556666443333221 12238999999999999999999999984

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.2e-32  Score=288.04  Aligned_cols=245  Identities=22%  Similarity=0.268  Sum_probs=190.9

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccc---cchHHHHHHHHH-hcccCCCCcccccceeccCCceEEEEEecc
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ---DSEKEFKAEVNG-IGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~---~~~~~~~~Ei~~-l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.||+|++|.||+|... ..++.+|+|.+.....   .....+..|..+ ....+|+|++++++++...+..++|+||++
T Consensus         2 ~~l~~g~~~~v~~a~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (260)
T cd05611           2 KPISKGAFGSVYLAKKR-STGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLN   80 (260)
T ss_pred             ccCCcCCCeeEEEEEec-CCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccC
Confidence            46899999999999754 4567899999865321   122334455444 445589999999999999999999999999


Q ss_pred             CCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          583 NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       583 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      +++|.+++.....+++..+.+++.||+.||.|||+.   +++|+||+|+||++++++.+||+|||+++....     ...
T Consensus        81 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-----~~~  152 (260)
T cd05611          81 GGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-----NKK  152 (260)
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc-----ccc
Confidence            999999998777889999999999999999999998   999999999999999999999999999876432     223


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCH
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV  742 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  742 (792)
                      ..++..|+|||.+.+..++.++||||||+++|||++|..||........   .     ........      ........
T Consensus       153 ~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~-----~~~~~~~~------~~~~~~~~  218 (260)
T cd05611         153 FVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAV---F-----DNILSRRI------NWPEEVKE  218 (260)
T ss_pred             CCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHH---H-----HHHHhccc------CCCCcccc
Confidence            4578899999999888899999999999999999999999965422110   0     00000000      00011111


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHhHHHHhc
Q 003836          743 TMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE  774 (792)
Q Consensus       743 ~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~  774 (792)
                      ..+..+.+++.+||+.+|++||++.++.+.|+
T Consensus       219 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~  250 (260)
T cd05611         219 FCSPEAVDLINRLLCMDPAKRLGANGYQEIKS  250 (260)
T ss_pred             cCCHHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence            34567899999999999999998876666554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-32  Score=296.12  Aligned_cols=263  Identities=20%  Similarity=0.280  Sum_probs=194.3

Q ss_pred             hhhhhcCccccceEEEeeecCC-CceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccC--CceEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMG-SSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEG--QNRLLV  577 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~-~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~--~~~~lV  577 (792)
                      .+.++||+|++|.||+|..... .++.+|+|.+....   ......+.+|+.++.+++||||+++++++.+.  ...++|
T Consensus         3 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   82 (316)
T cd07842           3 EIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLL   82 (316)
T ss_pred             eEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEE
Confidence            3457799999999999986542 56799999998633   34456788999999999999999999999888  789999


Q ss_pred             EEeccCCCccccccCC-----CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC----CCCeEEeecCC
Q 003836          578 YEFMSNGTVASFLFGD-----SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD----HYNARISDFGL  648 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~----~~~~kl~Dfg~  648 (792)
                      |||+++ +|.+++...     ..+++..+..++.||+.||.|||+.   +|+||||||+|||++.    ++.+||+|||+
T Consensus        83 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~  158 (316)
T cd07842          83 FDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDLGL  158 (316)
T ss_pred             EeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCCcc
Confidence            999986 566555321     2578889999999999999999998   9999999999999999    99999999999


Q ss_pred             CccccCCCC--CccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhh------hhhHHHHH
Q 003836          649 AKLLTLDQS--HTNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVD------KAILTDWA  719 (792)
Q Consensus       649 a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~------~~~~~~~~  719 (792)
                      ++.......  .......+++.|+|||.+.+ ..++.++||||||++++||++|+.||........      ...+....
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (316)
T cd07842         159 ARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIF  238 (316)
T ss_pred             ccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHH
Confidence            987643322  12223457889999998866 4589999999999999999999999965433220      00000000


Q ss_pred             HHhhcc------------cchhHhhhchhcccCC---------H--HHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          720 YDRYQE------------RTLEALVENDLEAMNN---------V--TMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       720 ~~~~~~------------~~~~~~~~~~~~~~~~---------~--~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                       ..+..            .......+.......+         .  ....++.+++.+||+.+|++|||+.|+++
T Consensus       239 -~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~  312 (316)
T cd07842         239 -EVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE  312 (316)
T ss_pred             -HHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence             00000            0000000000000000         0  23457899999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=1.2e-32  Score=291.69  Aligned_cols=246  Identities=25%  Similarity=0.359  Sum_probs=189.0

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHH-hcccCCCCcccccceeccCCceEEEEEecc
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNG-IGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~-l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.||+|+||.||++... .+++.||+|+++... ...+.++..|+.. ++.++|+||+++++++..++..++||||++
T Consensus         5 ~~~~ig~g~~g~v~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~   83 (283)
T cd06617           5 VIEELGRGAYGVVDKMRHV-PTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMD   83 (283)
T ss_pred             EEEEecccCCeEEEEEEEc-CCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhc
Confidence            4578999999999999754 557899999987542 2334566667665 556789999999999999999999999997


Q ss_pred             CCCccccccC----CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          583 NGTVASFLFG----DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       583 ~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                       |+|.+++..    ...+++..+..++.||+.||+|||++  .+++||||||+|||++.++.+||+|||+++......  
T Consensus        84 -~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~--  158 (283)
T cd06617          84 -TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSK--LSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV--  158 (283)
T ss_pred             -ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeeccccccccccc--
Confidence             578777643    24678999999999999999999985  389999999999999999999999999998653221  


Q ss_pred             ccccccccCCccccccccc----CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhc
Q 003836          659 TNTAIRGTKGYVAPEWFRN----MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEN  734 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~----~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  734 (792)
                      ......++..|+|||.+.+    ..++.++|+||||+++|||++|+.||.......+.  +             ......
T Consensus       159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~--~-------------~~~~~~  223 (283)
T cd06617         159 AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQ--L-------------KQVVEE  223 (283)
T ss_pred             ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHH--H-------------HHHHhc
Confidence            1223457889999998864    45789999999999999999999998643211110  0             011111


Q ss_pred             hhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          735 DLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       735 ~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ..........+.++.+++.+||+.+|.+||+++++++
T Consensus       224 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  260 (283)
T cd06617         224 PSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ  260 (283)
T ss_pred             CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            0000011124567889999999999999999999987

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-32  Score=287.77  Aligned_cols=247  Identities=21%  Similarity=0.280  Sum_probs=197.4

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccc-----cccchHHHHHHHHHhcccCCCCcccccceeccC--CceEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-----FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEG--QNRLL  576 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~-----~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~--~~~~l  576 (792)
                      .+.+.||+|++|.||++... .+++.+|+|++...     .....+.+++|++++++++|+||+++++++.+.  ...++
T Consensus         5 ~~~~~lg~g~~g~v~~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~   83 (264)
T cd06653           5 RLGKLLGRGAFGEVYLCYDA-DTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSI   83 (264)
T ss_pred             eeeeeEccCCCeEEEEEEEc-CCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEE
Confidence            45678999999999999754 45678999987432     123345788999999999999999999998654  45789


Q ss_pred             EEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC
Q 003836          577 VYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~  656 (792)
                      |+||+++++|.+++.....+++....+++.||+.||.|||+.   +++|+||||+||+++.++.++|+|||+++......
T Consensus        84 v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~  160 (264)
T cd06653          84 FVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRIQTIC  160 (264)
T ss_pred             EEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcccccccccccc
Confidence            999999999999998777788999999999999999999998   99999999999999999999999999998654211


Q ss_pred             C--CccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhc
Q 003836          657 S--HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEN  734 (792)
Q Consensus       657 ~--~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  734 (792)
                      .  .......++..|+|||.+.+..++.++|||||||+++||++|+.||........                .......
T Consensus       161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----------------~~~~~~~  224 (264)
T cd06653         161 MSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAA----------------IFKIATQ  224 (264)
T ss_pred             ccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHH----------------HHHHHcC
Confidence            1  112234588999999999988899999999999999999999999864321110                1111111


Q ss_pred             hhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          735 DLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       735 ~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ......+....+.+.+++.+|++ +|..||+..+++.
T Consensus       225 ~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~  260 (264)
T cd06653         225 PTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR  260 (264)
T ss_pred             CCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence            12233445566788999999999 5799999998876

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=2e-32  Score=291.49  Aligned_cols=260  Identities=19%  Similarity=0.240  Sum_probs=190.8

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccccc-cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      +.+.||+|+||.||+|... .+++.+++|++..... .....+.+|+.++++++|+||+++++++..+...++|+||++ 
T Consensus         9 ~~~~ig~g~~~~v~~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-   86 (291)
T cd07870           9 NLEKLGEGSYATVYKGISR-INGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-   86 (291)
T ss_pred             EEEEEEecCCEEEEEEEEc-CCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc-
Confidence            4578999999999999654 3456899999865432 234577899999999999999999999999999999999996 


Q ss_pred             CCccccccC-CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          584 GTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       584 gsL~~~l~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      ++|.+++.. ...+.+..+..++.||+.||.|||+.   +|+|+||||+|||++.++.+||+|||+++....... ....
T Consensus        87 ~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~-~~~~  162 (291)
T cd07870          87 TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQ-TYSS  162 (291)
T ss_pred             CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccCCCCC-CCCC
Confidence            577666644 35577888899999999999999998   999999999999999999999999999976433221 1223


Q ss_pred             ccccCCcccccccccC-CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHh---------hc--ccchhH
Q 003836          663 IRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDR---------YQ--ERTLEA  730 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~---------~~--~~~~~~  730 (792)
                      ..+++.|+|||.+.+. .++.++||||||+++|||++|+.||.......+.. ...+....         ..  ......
T Consensus       163 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (291)
T cd07870         163 EVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQL-EKIWTVLGVPTEDTWPGVSKLPNYKPE  241 (291)
T ss_pred             ccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHH-HHHHHHcCCCChhhhhhhhhcccccch
Confidence            3468899999998754 57899999999999999999999997543321110 00000000         00  000000


Q ss_pred             hhhchhccc-----CCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          731 LVENDLEAM-----NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       731 ~~~~~~~~~-----~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .........     ........+.+++.+|++.||++|||++|++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         242 WFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             hccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence            000000000     00012456788999999999999999999886

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=1.6e-32  Score=286.01  Aligned_cols=247  Identities=26%  Similarity=0.345  Sum_probs=203.4

Q ss_pred             hhhcCccccceEEEeeecCCCceEEEEEEcccccc--cchHHHHHHHHHhcccCCCCcccccceeccC--CceEEEEEec
Q 003836          506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ--DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEG--QNRLLVYEFM  581 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~--~~~~lV~E~~  581 (792)
                      .+.||+|++|.||+|... .+++.+++|++.....  ...+.+.+|+..+++++|+||+++++.+.+.  ...++|+||+
T Consensus         5 ~~~i~~g~~~~v~~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~   83 (260)
T cd06606           5 GELLGRGSFGSVYLALDK-DTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYV   83 (260)
T ss_pred             eeEeeecCceEEEEEEEC-CCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEec
Confidence            467999999999999764 3567899999876542  4567899999999999999999999999988  8899999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC-cc
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH-TN  660 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~-~~  660 (792)
                      ++++|.+++.....+++..+..++.|+++||+|||+.   +++|+||+|+||+++.++.+||+|||.+......... ..
T Consensus        84 ~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~  160 (260)
T cd06606          84 SGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGT  160 (260)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEecccccccccc
Confidence            9999999998777899999999999999999999998   9999999999999999999999999999876544321 12


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ....++..|+|||.+.....+.++||||||+++++|++|+.||.........      .         ..+.........
T Consensus       161 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~------~---------~~~~~~~~~~~~  225 (260)
T cd06606         161 GSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAA------L---------YKIGSSGEPPEI  225 (260)
T ss_pred             cCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHH------H---------HhccccCCCcCC
Confidence            3345788999999998888999999999999999999999999754311000      0         001111111222


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      +......+.+++.+|++.+|++||++.++++
T Consensus       226 ~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         226 PEHLSEEAKDFLRKCLRRDPKKRPTADELLQ  256 (260)
T ss_pred             CcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence            3334678899999999999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=2.7e-32  Score=290.43  Aligned_cols=245  Identities=24%  Similarity=0.342  Sum_probs=197.4

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCCCc
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTV  586 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~gsL  586 (792)
                      .+||+|+||.||++... .+++.+|+|++..........+.+|+.++++++|+||+++++.+...+..++||||+++++|
T Consensus        26 ~~lg~g~~g~v~~~~~~-~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L  104 (292)
T cd06657          26 IKIGEGSTGIVCIATVK-SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL  104 (292)
T ss_pred             HHcCCCCCeEEEEEEEc-CCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence            57999999999999754 45679999998765555567799999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccccccc
Q 003836          587 ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGT  666 (792)
Q Consensus       587 ~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt  666 (792)
                      .+++.. ..+++.....++.|++.||+|||+.   +++|+||+|+||++++++.++|+|||++....... .......++
T Consensus       105 ~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~  179 (292)
T cd06657         105 TDIVTH-TRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRKSLVGT  179 (292)
T ss_pred             HHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceeccccc-ccccccccC
Confidence            998754 4578899999999999999999998   99999999999999999999999999987654322 122334578


Q ss_pred             CCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHHH
Q 003836          667 KGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLH  746 (792)
Q Consensus       667 ~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  746 (792)
                      +.|+|||.+.+..++.++||||||+++|||++|..||...........+    ..         .......  .......
T Consensus       180 ~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~----~~---------~~~~~~~--~~~~~~~  244 (292)
T cd06657         180 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI----RD---------NLPPKLK--NLHKVSP  244 (292)
T ss_pred             ccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH----Hh---------hCCcccC--CcccCCH
Confidence            9999999998888999999999999999999999998654221110000    00         0000000  0112345


Q ss_pred             HHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          747 RFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       747 ~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .+.+++.+||+.+|.+||++.++++.
T Consensus       245 ~l~~li~~~l~~~P~~R~~~~~ll~~  270 (292)
T cd06657         245 SLKGFLDRLLVRDPAQRATAAELLKH  270 (292)
T ss_pred             HHHHHHHHHHhCCcccCcCHHHHhcC
Confidence            67889999999999999999999873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=100.00  E-value=2e-32  Score=291.25  Aligned_cols=250  Identities=22%  Similarity=0.247  Sum_probs=196.7

Q ss_pred             hhhhcCccccceEEEeeecC--CCceEEEEEEccccc----ccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEE
Q 003836          505 FKEELGRGAFGTVYKGFVNM--GSSNHVAVKKLNSVF----QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLV  577 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~--~~~~~vavK~~~~~~----~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV  577 (792)
                      +.+.||+|+||.||++....  .+++.+|+|++....    ....+.+.+|+++++++ +|+||+++++++..+...++|
T Consensus         4 ~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv   83 (290)
T cd05613           4 LLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLI   83 (290)
T ss_pred             eeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEE
Confidence            45789999999999987532  356789999986532    22346788999999999 599999999999999999999


Q ss_pred             EEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC
Q 003836          578 YEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      +||+++++|.+++.....+++..+..++.|+++||.|||+.   +++||||+|+|||+++++.+||+|||+++.......
T Consensus        84 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~  160 (290)
T cd05613          84 LDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEV  160 (290)
T ss_pred             EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCccceecccccc
Confidence            99999999999998777888999999999999999999998   999999999999999999999999999987654333


Q ss_pred             CccccccccCCcccccccccC--CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          658 HTNTAIRGTKGYVAPEWFRNM--PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       658 ~~~~~~~gt~~y~aPE~~~~~--~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                      .......|+..|+|||.+...  .++.++||||||+++|+|++|+.||........   .......         +... 
T Consensus       161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~---~~~~~~~---------~~~~-  227 (290)
T cd05613         161 ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNS---QAEISRR---------ILKS-  227 (290)
T ss_pred             cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcccc---HHHHHHH---------hhcc-
Confidence            333345688999999998753  478899999999999999999999864221100   0000000         0000 


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCC-----CHHhHHH
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRP-----TMRKVTQ  771 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RP-----s~~evl~  771 (792)
                       ....+......+.+++.+||+.+|++||     +.++++.
T Consensus       228 -~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~  267 (290)
T cd05613         228 -EPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK  267 (290)
T ss_pred             -CCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence             1112233456788999999999999997     6777765

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=100.00  E-value=2.7e-32  Score=296.79  Aligned_cols=265  Identities=21%  Similarity=0.278  Sum_probs=195.9

Q ss_pred             HhhhhhhcCccccceEEEeeecCCCceEEEEEEcccc--cccchHHHHHHHHHhccc-CCCCcccccceeccC--CceEE
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV--FQDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEG--QNRLL  576 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~--~~~~l  576 (792)
                      .+.+.+.||+|+||.||+|... .+++.+|+|++...  .......+.+|+.+++++ +|+||+++++++...  ...++
T Consensus         8 ~y~~~~~lg~g~~~~v~~~~~~-~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~l   86 (337)
T cd07852           8 KYEILQKLGKGAYGIVWKAIDR-RTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYL   86 (337)
T ss_pred             HHHHhHhhcCCCCeeEEEEEEc-CCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEE
Confidence            3455688999999999999754 44678999988643  223345678899999999 999999999998643  46899


Q ss_pred             EEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC
Q 003836          577 VYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~  656 (792)
                      ||||++ ++|.+++... .+++..+..++.||+.||+|||+.   +|+|+||||+||++++++.+||+|||+++......
T Consensus        87 v~e~~~-~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~  161 (337)
T cd07852          87 VFEYME-TDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARSLSELE  161 (337)
T ss_pred             Eecccc-cCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchhcccccc
Confidence            999998 5998888665 778899999999999999999998   99999999999999999999999999998764433


Q ss_pred             CC----ccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHH-------HHhhc
Q 003836          657 SH----TNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWA-------YDRYQ  724 (792)
Q Consensus       657 ~~----~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~-------~~~~~  724 (792)
                      ..    ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||................       .....
T Consensus       162 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (337)
T cd07852         162 ENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIK  241 (337)
T ss_pred             ccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHH
Confidence            21    2223468899999998755 567899999999999999999999986543221111000000       00000


Q ss_pred             ccchhHhhhchhcc------cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          725 ERTLEALVENDLEA------MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       725 ~~~~~~~~~~~~~~------~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ......+++.....      ......+..+.+++.+||+.+|++|||+.++++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         242 SPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             hhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence            00011111100000      0011135678999999999999999999999975

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=1.6e-32  Score=291.71  Aligned_cols=250  Identities=27%  Similarity=0.371  Sum_probs=192.0

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccC-CCCcccccceeccCCceEEEEEecc
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTH-HKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~-h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.++||+|+||.||++... .+++.+|+|++.... ......+.+|+.++.++. |+||+++++++..+...+++|||+.
T Consensus         8 ~~~~lg~G~~g~vy~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~   86 (288)
T cd06616           8 DLGEIGRGAFGTVNKMLHK-PSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMD   86 (288)
T ss_pred             HHHHhCCCCceEEEEEEEC-CCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEeccc
Confidence            3467999999999999754 456799999987533 234567899999999996 9999999999999999999999987


Q ss_pred             CCCccccc---c--CCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC
Q 003836          583 NGTVASFL---F--GDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       583 ~gsL~~~l---~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      . +|.++.   .  ....+++.....++.|++.||+|||+.  .+++||||||+||+++.++.+||+|||+++...... 
T Consensus        87 ~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-  162 (288)
T cd06616          87 I-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI-  162 (288)
T ss_pred             C-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEeecchhHHhccCC-
Confidence            4 554432   2  235688999999999999999999974  389999999999999999999999999997654322 


Q ss_pred             CccccccccCCcccccccccC---CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhc
Q 003836          658 HTNTAIRGTKGYVAPEWFRNM---PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEN  734 (792)
Q Consensus       658 ~~~~~~~gt~~y~aPE~~~~~---~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  734 (792)
                       ......+++.|+|||.+...   .++.++||||||+++|||++|+.||.........      ...... ..     .+
T Consensus       163 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~------~~~~~~-~~-----~~  229 (288)
T cd06616         163 -AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQ------LTQVVK-GD-----PP  229 (288)
T ss_pred             -ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHH------HhhhcC-CC-----CC
Confidence             12233578899999998765   6899999999999999999999998643211000      000000 00     01


Q ss_pred             hhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          735 DLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       735 ~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .+........+.++.+++.+||+.+|++|||+++|++.
T Consensus       230 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~  267 (288)
T cd06616         230 ILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH  267 (288)
T ss_pred             cCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            11111122356678999999999999999999999873

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>PHA02882 putative serine/threonine kinase; Provisional

Probab=100.00  E-value=1.4e-32  Score=292.92  Aligned_cols=259  Identities=19%  Similarity=0.206  Sum_probs=182.9

Q ss_pred             HhhhhhhcCccccceEEEeeecCCC--ceEEEEEEcccccccc--h---------HHHHHHHHHhcccCCCCccccccee
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGS--SNHVAVKKLNSVFQDS--E---------KEFKAEVNGIGQTHHKNLVRLLGYC  568 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~--~~~vavK~~~~~~~~~--~---------~~~~~Ei~~l~~l~h~niv~l~g~~  568 (792)
                      .+.+.+.||+|+||+||+|......  ...+++|+........  +         .....+...+..++|+|++++++++
T Consensus        13 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~   92 (294)
T PHA02882         13 EWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCG   92 (294)
T ss_pred             ceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEee
Confidence            4556688999999999999765331  3456666533221111  1         1122334456677999999999977


Q ss_pred             ccCC----ceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEe
Q 003836          569 DEGQ----NRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARIS  644 (792)
Q Consensus       569 ~~~~----~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~  644 (792)
                      ....    ..++++|++.. ++.+.+......++..+..|+.|+++||+|||+.   +|+||||||+|||++.++.+||+
T Consensus        93 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~~~~l~  168 (294)
T PHA02882         93 SFKRCRMYYRFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNNRGYII  168 (294)
T ss_pred             eEecCCceEEEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCcEEEE
Confidence            5443    34677777643 5555555444467888899999999999999998   99999999999999999999999


Q ss_pred             ecCCCccccCCCC------CccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH
Q 003836          645 DFGLAKLLTLDQS------HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW  718 (792)
Q Consensus       645 Dfg~a~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~  718 (792)
                      |||+++.+.....      .......||+.|+|||.+.+..++.++|||||||+++||++|+.||.............. 
T Consensus       169 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~-  247 (294)
T PHA02882        169 DYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAK-  247 (294)
T ss_pred             EcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhH-
Confidence            9999987643221      111234699999999999999999999999999999999999999976532211110000 


Q ss_pred             HHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhc
Q 003836          719 AYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE  774 (792)
Q Consensus       719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~  774 (792)
                        .    ..+..+......   .......+.+++..|++.+|++||+++++++.|+
T Consensus       248 --~----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~  294 (294)
T PHA02882        248 --C----DFIKRLHEGKIK---IKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD  294 (294)
T ss_pred             --H----HHHHHhhhhhhc---cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence              0    000111111111   1123467889999999999999999999999764

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=1.6e-32  Score=300.60  Aligned_cols=261  Identities=24%  Similarity=0.281  Sum_probs=193.5

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccC------Cce
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEG------QNR  574 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~------~~~  574 (792)
                      +...+.||+|+||.||++... .+++.+|+|++....  ....+.+.+|+.++++++|+||+++++++...      ...
T Consensus        18 y~~~~~lg~g~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   96 (353)
T cd07850          18 YQNLKPIGSGAQGIVCAAYDT-VTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDV   96 (353)
T ss_pred             eEEEEEeccCCCEEEEEEEEC-CCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcE
Confidence            334578999999999999654 456799999986532  23345778899999999999999999988543      357


Q ss_pred             EEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccC
Q 003836          575 LLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL  654 (792)
Q Consensus       575 ~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~  654 (792)
                      ++||||+++ +|.+.+...  ++...+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++....
T Consensus        97 ~lv~e~~~~-~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~  170 (353)
T cd07850          97 YLVMELMDA-NLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  170 (353)
T ss_pred             EEEEeccCC-CHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCccceeCCC
Confidence            999999965 788777543  78889999999999999999998   999999999999999999999999999986543


Q ss_pred             CCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHH--------HHH------H
Q 003836          655 DQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILT--------DWA------Y  720 (792)
Q Consensus       655 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~--------~~~------~  720 (792)
                      ..  ......+++.|+|||.+.+..++.++|||||||++|+|++|+.||...........+.        .+.      .
T Consensus       171 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (353)
T cd07850         171 SF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTV  248 (353)
T ss_pred             CC--CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhh
Confidence            22  1233457889999999999999999999999999999999999996543211100000        000      0


Q ss_pred             Hhh-cc------cchhHhhhchh----cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          721 DRY-QE------RTLEALVENDL----EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       721 ~~~-~~------~~~~~~~~~~~----~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ... ..      .....+.....    ...........+.+++.+||+.||++|||+.|+++.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~  311 (353)
T cd07850         249 RNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH  311 (353)
T ss_pred             hHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            000 00      00001110000    001112345678899999999999999999999975

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=1.9e-32  Score=285.50  Aligned_cols=244  Identities=23%  Similarity=0.311  Sum_probs=200.1

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.++||+|++|.||+++.. .+++.+++|++....  .....++.+|++++++++|+||+++++++.+....++|+||++
T Consensus         4 ~~~~i~~g~~~~v~~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   82 (256)
T cd08530           4 VLKKLGKGSYGSVYKVKRL-SDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAP   82 (256)
T ss_pred             EeeeecCCCceeEEEEEEC-CCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcC
Confidence            4578999999999999754 456789999987532  2335578899999999999999999999999999999999999


Q ss_pred             CCCccccccC----CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          583 NGTVASFLFG----DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       583 ~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      +++|.+++.+    ...+++..+..++.|++.||+|||+.   +++|+||+|+||++++++.+||+|||+++.....   
T Consensus        83 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~---  156 (256)
T cd08530          83 FGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKN---  156 (256)
T ss_pred             CCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccC---
Confidence            9999999865    35678899999999999999999998   9999999999999999999999999999876543   


Q ss_pred             ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          659 TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      ......+++.|+|||.+.+..++.++|+||||+++|||++|+.||.........                 ..+......
T Consensus       157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~-----------------~~~~~~~~~  219 (256)
T cd08530         157 MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLR-----------------YKVQRGKYP  219 (256)
T ss_pred             CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-----------------HHHhcCCCC
Confidence            222345788999999999999999999999999999999999999654321000                 000111111


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ..+.....++.+++.+|++.+|++||++.++++.
T Consensus       220 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  253 (256)
T cd08530         220 PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS  253 (256)
T ss_pred             CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            2233456778999999999999999999999873

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=2.5e-32  Score=295.93  Aligned_cols=262  Identities=22%  Similarity=0.264  Sum_probs=193.2

Q ss_pred             hhcCcc--ccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          507 EELGRG--AFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       507 ~~lG~G--~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      ++||+|  +||+||++.. ...++.||+|++....  ....+.+.+|+.+++.++||||++++++|..++..++|+||++
T Consensus         4 ~~ig~g~~~~~~v~~a~~-~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~   82 (328)
T cd08226           4 VEIGRGFCNLTSVYLARH-TPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA   82 (328)
T ss_pred             HHhCCcccCceeEEEEEE-cCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence            457777  8899999965 3456899999986432  2334678999999999999999999999999999999999999


Q ss_pred             CCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc-
Q 003836          583 NGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT-  659 (792)
Q Consensus       583 ~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~-  659 (792)
                      +++|.+++...  ..+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+|++||+.+.......... 
T Consensus        83 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~  159 (328)
T cd08226          83 YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAK  159 (328)
T ss_pred             CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccc
Confidence            99999998764  3578889999999999999999998   99999999999999999999999998654332211110 


Q ss_pred             -----cccccccCCcccccccccC--CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH-------------H
Q 003836          660 -----NTAIRGTKGYVAPEWFRNM--PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW-------------A  719 (792)
Q Consensus       660 -----~~~~~gt~~y~aPE~~~~~--~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~-------------~  719 (792)
                           .....++..|+|||++.+.  .++.++|||||||+++||++|+.||...............             .
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (328)
T cd08226         160 VVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCE  239 (328)
T ss_pred             ccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchh
Confidence                 0112245679999999763  5789999999999999999999999754322110000000             0


Q ss_pred             HHhh-------c----ccc-----hhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          720 YDRY-------Q----ERT-----LEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       720 ~~~~-------~----~~~-----~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ....       .    +..     ...+....+...........+.+++.+||+.||++|||++|+++.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~  308 (328)
T cd08226         240 ESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH  308 (328)
T ss_pred             hhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence            0000       0    000     001111112222234567789999999999999999999999863

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=2.5e-32  Score=289.46  Aligned_cols=260  Identities=21%  Similarity=0.287  Sum_probs=195.4

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccccc-cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      +.++||.|++|.||+|+.. .+++.+|+|++..... .....+.+|+.++++++|+||+++++++.+.+..++||||+++
T Consensus         4 ~~~~l~~g~~~~v~~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   82 (284)
T cd07836           4 QLEKLGEGTYATVYKGRNR-TTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDK   82 (284)
T ss_pred             EeeeeccCCceEEEEEEEC-CCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCCc
Confidence            4578999999999999764 4567899999875433 2346778899999999999999999999999999999999985


Q ss_pred             CCccccccCC---CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          584 GTVASFLFGD---SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       584 gsL~~~l~~~---~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                       +|.+++...   ..+++..+.+++.||+.||+|||+.   +++|+||||+||++++++.+||+|||+++....... ..
T Consensus        83 -~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~-~~  157 (284)
T cd07836          83 -DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN-TF  157 (284)
T ss_pred             -cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc-cc
Confidence             888887543   3579999999999999999999998   999999999999999999999999999976543222 12


Q ss_pred             ccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhh-chh--
Q 003836          661 TAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVE-NDL--  736 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--  736 (792)
                      ....+++.|++||.+.+ ..++.++||||||+++|||++|+.||................. ...+.....+.. +..  
T Consensus       158 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  236 (284)
T cd07836         158 SNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMG-TPTESTWPGISQLPEYKP  236 (284)
T ss_pred             ccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhC-CCChhhHHHHhcCchhcc
Confidence            23446889999998865 4578999999999999999999999875432211111100000 000000000000 000  


Q ss_pred             ---------cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          737 ---------EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       737 ---------~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                               ...........+.+++.+|++.+|.+||++.|+++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         237 TFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             cccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                     00011233567889999999999999999999986

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=2.7e-32  Score=296.37  Aligned_cols=264  Identities=22%  Similarity=0.301  Sum_probs=197.5

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceecc----CCceEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDE----GQNRLLV  577 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~----~~~~~lV  577 (792)
                      .+.+.||+|++|.||++... .+++.||+|++....  ....+.+.+|+.++.+++|+||+++++++..    ....++|
T Consensus         8 ~~~~~lg~g~~g~v~~~~~~-~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv   86 (334)
T cd07855           8 KPIENIGSGAYGVVCSAIDT-RSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVV   86 (334)
T ss_pred             eeeeeeecCCCeEEEEEEEc-CCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEE
Confidence            34568999999999999654 456799999987542  2345678889999999999999999998853    3568999


Q ss_pred             EEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC
Q 003836          578 YEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      |||+. ++|.+++.....+++..+..++.||+.||.|||+.   +|+||||||+||++++++.+||+|||+++.......
T Consensus        87 ~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~  162 (334)
T cd07855          87 MDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPT  162 (334)
T ss_pred             Eehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccceeecccCc
Confidence            99996 58999998777899999999999999999999998   999999999999999999999999999987643322


Q ss_pred             C---ccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH-------HHHhhccc
Q 003836          658 H---TNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW-------AYDRYQER  726 (792)
Q Consensus       658 ~---~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~-------~~~~~~~~  726 (792)
                      .   ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||...............       ........
T Consensus       163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  242 (334)
T cd07855         163 EHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSD  242 (334)
T ss_pred             CCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchh
Confidence            1   1223468889999999865 56899999999999999999999999654321110000000       00000001


Q ss_pred             chhHhhhch-hcccC-----CHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          727 TLEALVEND-LEAMN-----NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       727 ~~~~~~~~~-~~~~~-----~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ......... .....     ....+.++.+++.+||+.+|.+||+++++++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~  294 (334)
T cd07855         243 RVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH  294 (334)
T ss_pred             hHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            111111100 00000     12246788999999999999999999999874

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.98  E-value=2.4e-32  Score=297.18  Aligned_cols=265  Identities=21%  Similarity=0.265  Sum_probs=197.9

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccc--cccchHHHHHHHHHhcccCCCCcccccceeccC-----CceEEE
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV--FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEG-----QNRLLV  577 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~-----~~~~lV  577 (792)
                      ..+.||+|+||+||++... .+++.||||++...  .......+.+|+.++++++|+||+++++++...     ...++|
T Consensus         9 ~~~~lg~G~~~~vy~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv   87 (337)
T cd07858           9 PIKPIGRGAYGIVCSAKNS-ETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIV   87 (337)
T ss_pred             EEEEeccCCCeEEEEEEec-CCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEE
Confidence            3467999999999999754 56789999998753  233345778899999999999999999988644     357999


Q ss_pred             EEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC
Q 003836          578 YEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      +||+. ++|.+++.....+++..+..++.||+.||.|||+.   +++|+||||+||+++.++.+||+|||+++...... 
T Consensus        88 ~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-  162 (337)
T cd07858          88 YELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKG-  162 (337)
T ss_pred             EeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCccccccCCCc-
Confidence            99996 68998888777899999999999999999999998   99999999999999999999999999998764332 


Q ss_pred             CccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHH-------HHhhcccchh
Q 003836          658 HTNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWA-------YDRYQERTLE  729 (792)
Q Consensus       658 ~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~  729 (792)
                      .......++..|+|||.+.. ..++.++||||||+++|+|++|+.||................       ..........
T Consensus       163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (337)
T cd07858         163 DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKAR  242 (337)
T ss_pred             ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhh
Confidence            22233457889999998865 568999999999999999999999996542211111000000       0000011111


Q ss_pred             Hhhhchhcc------cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH--hcc
Q 003836          730 ALVENDLEA------MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM--LEG  775 (792)
Q Consensus       730 ~~~~~~~~~------~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~--L~~  775 (792)
                      ..+......      ......+.++.+++.+||+.+|++|||++|+++.  ++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~  296 (337)
T cd07858         243 RYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLAS  296 (337)
T ss_pred             HHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhh
Confidence            111100000      0012345778999999999999999999999976  544

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.98  E-value=2.2e-32  Score=284.48  Aligned_cols=246  Identities=24%  Similarity=0.371  Sum_probs=202.0

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccc--cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ--DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .+.+.||+|++|.||++... ..++.+++|.+.....  .....+.+|++++++++|+|++++++++.+.+..++||||+
T Consensus         3 ~~~~~l~~g~~~~v~~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   81 (254)
T cd06627           3 QLGDLIGRGAFGVVYKGLNL-ETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYA   81 (254)
T ss_pred             eeeeEEcccCCeEEEEEEEc-CCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecC
Confidence            34578999999999999754 4457899999876543  34568999999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      ++++|.+++.....+++..+..++.|++.||.|||+.   +|+|+||+|+||+++.++.+||+|||.+......... ..
T Consensus        82 ~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-~~  157 (254)
T cd06627          82 ENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD-DA  157 (254)
T ss_pred             CCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCccc-cc
Confidence            9999999998878899999999999999999999998   9999999999999999999999999999876543321 23


Q ss_pred             cccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCC
Q 003836          662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN  741 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  741 (792)
                      ...++..|+|||...+..++.++||||+|+++++|++|+.|+.........     +...            .......+
T Consensus       158 ~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~-----~~~~------------~~~~~~~~  220 (254)
T cd06627         158 SVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAAL-----FRIV------------QDDHPPLP  220 (254)
T ss_pred             ccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHH-----HHHh------------ccCCCCCC
Confidence            345788999999998888999999999999999999999998654321000     0000            00111122


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          742 VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       742 ~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ......+.+++.+||+.+|++||++.+++.
T Consensus       221 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         221 EGISPELKDFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             CCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence            234567889999999999999999999986

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.98  E-value=3.2e-32  Score=287.85  Aligned_cols=243  Identities=23%  Similarity=0.239  Sum_probs=189.6

Q ss_pred             hcCccccceEEEeeecCCCceEEEEEEcccccc---cchHHHHHHHH---HhcccCCCCcccccceeccCCceEEEEEec
Q 003836          508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ---DSEKEFKAEVN---GIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       508 ~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~---~~~~~~~~Ei~---~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .||+|+||.||++... .+++.||+|.+.....   .....+.+|..   .++..+|+||+++++++.+.+..++||||+
T Consensus         1 ~ig~g~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~   79 (278)
T cd05606           1 IIGRGGFGEVYGCRKA-DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLM   79 (278)
T ss_pred             CcccCCCeEEEEEEEe-cCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecC
Confidence            4899999999999653 4567999999865321   12223444444   344457999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      ++++|..++.....+++..+..++.|+++||.|||+.   +|+|+||||+||++++++.+||+|||+++......   ..
T Consensus        80 ~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~---~~  153 (278)
T cd05606          80 NGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---PH  153 (278)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccC---Cc
Confidence            9999999998777899999999999999999999998   99999999999999999999999999987653222   12


Q ss_pred             cccccCCcccccccccC-CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          662 AIRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ...|+..|+|||.+.+. .++.++||||+|+++|||++|+.||............              ... .......
T Consensus       154 ~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~--------------~~~-~~~~~~~  218 (278)
T cd05606         154 ASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID--------------RMT-LTMAVEL  218 (278)
T ss_pred             CcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHH--------------HHh-hccCCCC
Confidence            34589999999998754 6899999999999999999999999754221110000              000 0001112


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCC-----CHHhHHHH
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRP-----TMRKVTQM  772 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RP-----s~~evl~~  772 (792)
                      +...+..+.+++.+||+.+|.+||     ++.++++.
T Consensus       219 ~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~  255 (278)
T cd05606         219 PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH  255 (278)
T ss_pred             CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence            223457888999999999999999     99999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.98  E-value=4.5e-32  Score=287.38  Aligned_cols=259  Identities=24%  Similarity=0.343  Sum_probs=194.6

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccccc-cchHHHHHHHHHhcccC-CCCcccccceeccCCceEEEEEecc
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTH-HKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~-h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.||+|++|+||+|+.. .+++.+++|++..... .......+|+..+++++ |+||+++++++.+++..++||||+ 
T Consensus         3 ~~~~ig~g~~g~v~~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-   80 (283)
T cd07830           3 VIKQLGDGTFGSVYLARNK-ETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-   80 (283)
T ss_pred             eheeeccCCceEEEEEEEC-CCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-
Confidence            4578999999999999764 3457899999875433 23345567999999999 999999999999999999999999 


Q ss_pred             CCCccccccCCC--CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          583 NGTVASFLFGDS--KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       583 ~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +|+|.+++....  .+++..+..++.|++.+|.|||+.   +++|+||+|+||++++++.++|+|||+++.......  .
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~--~  155 (283)
T cd07830          81 EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP--Y  155 (283)
T ss_pred             CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCCC--c
Confidence            789999887654  789999999999999999999998   999999999999999999999999999986543222  2


Q ss_pred             ccccccCCcccccccc-cCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHH---------HHHHHhhcccchhH
Q 003836          661 TAIRGTKGYVAPEWFR-NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILT---------DWAYDRYQERTLEA  730 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~-~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~  730 (792)
                      ....++..|+|||.+. ...++.++||||||++++||++|+.||.............         .|............
T Consensus       156 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (283)
T cd07830         156 TDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGF  235 (283)
T ss_pred             CCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccc
Confidence            2345788999999885 4568999999999999999999999886543211110000         00000000000000


Q ss_pred             h----hhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          731 L----VENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       731 ~----~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .    ......... .....++.+++.+||+.+|++||+++|++.
T Consensus       236 ~~~~~~~~~~~~~~-~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  279 (283)
T cd07830         236 RFPQFAPTSLHQLI-PNASPEAIDLIKDMLRWDPKKRPTASQALQ  279 (283)
T ss_pred             cccccccccHHHHc-ccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence            0    000000000 112467899999999999999999999987

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.98  E-value=6.7e-34  Score=325.22  Aligned_cols=246  Identities=25%  Similarity=0.322  Sum_probs=203.5

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCC
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNG  584 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~g  584 (792)
                      ..||.|.||.||-+. +..+++..|+|-+....  ....+.+.+|+.++..++|||+|+++|+-.+.++.+|.||||++|
T Consensus      1241 ~~Ig~G~fG~VYtav-N~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~G 1319 (1509)
T KOG4645|consen 1241 NFIGGGTFGKVYTAV-NLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGG 1319 (1509)
T ss_pred             cccCCcceeeeEEee-cCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccC
Confidence            469999999999995 56778899999876432  334567899999999999999999999999999999999999999


Q ss_pred             CccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC---ccc
Q 003836          585 TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH---TNT  661 (792)
Q Consensus       585 sL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~---~~~  661 (792)
                      +|.+.+...+..++.....+..|++.|++|||+.   +||||||||.||+|+.+|.+|++|||.|.........   ...
T Consensus      1320 sLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~ 1396 (1509)
T KOG4645|consen 1320 SLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQ 1396 (1509)
T ss_pred             cHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHH
Confidence            9999998888888888888999999999999999   9999999999999999999999999999987654211   122


Q ss_pred             cccccCCcccccccccC---CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          662 AIRGTKGYVAPEWFRNM---PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~---~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      ...||+.|||||++.+.   ....++||||+|||++||+||++||......-.                +.-.+.-.-.+
T Consensus      1397 ~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~a----------------IMy~V~~gh~P 1460 (1509)
T KOG4645|consen 1397 SMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWA----------------IMYHVAAGHKP 1460 (1509)
T ss_pred             hhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhH----------------HHhHHhccCCC
Confidence            45699999999999753   466899999999999999999999965432211                00011112233


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ..|...+.+-.+++..||+.||.+|-++.|+++.
T Consensus      1461 q~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1461 QIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred             CCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence            4455677888999999999999999999888875

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.98  E-value=4.5e-32  Score=284.88  Aligned_cols=235  Identities=19%  Similarity=0.217  Sum_probs=184.5

Q ss_pred             cCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEEEeccCCCcc
Q 003836          509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVA  587 (792)
Q Consensus       509 lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~E~~~~gsL~  587 (792)
                      ||+|+||.||++... .+++.+|+|.+.......   .  |+.....+ +|+||+++++.+...+..++||||+++++|.
T Consensus        24 lg~g~~g~v~~~~~~-~~~~~~~~k~~~~~~~~~---~--e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~   97 (267)
T PHA03390         24 LIDGKFGKVSVLKHK-PTQKLFVQKIIKAKNFNA---I--EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLF   97 (267)
T ss_pred             ecCCCceEEEEEEEc-CCCcEEEEEEEehhhcch---h--hHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcHH
Confidence            599999999999654 456789999986532111   1  22222222 7999999999999999999999999999999


Q ss_pred             ccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCC-CeEEeecCCCccccCCCCCcccccccc
Q 003836          588 SFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY-NARISDFGLAKLLTLDQSHTNTAIRGT  666 (792)
Q Consensus       588 ~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~-~~kl~Dfg~a~~~~~~~~~~~~~~~gt  666 (792)
                      +++.....+++..+..++.||++||.|||+.   +++||||||+||+++.++ .++|+|||+++......     ...++
T Consensus        98 ~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~-----~~~~~  169 (267)
T PHA03390         98 DLLKKEGKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPS-----CYDGT  169 (267)
T ss_pred             HHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecCccceecCCCc-----cCCCC
Confidence            9998777899999999999999999999998   999999999999999998 99999999987654222     23578


Q ss_pred             CCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHHH
Q 003836          667 KGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLH  746 (792)
Q Consensus       667 ~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  746 (792)
                      ..|+|||.+.+..++.++||||||++++||++|+.||.......  .....+...          ...  ........+.
T Consensus       170 ~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~----------~~~--~~~~~~~~~~  235 (267)
T PHA03390        170 LDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE--LDLESLLKR----------QQK--KLPFIKNVSK  235 (267)
T ss_pred             CcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch--hhHHHHHHh----------hcc--cCCcccccCH
Confidence            89999999999899999999999999999999999997432211  001111000          000  0111224567


Q ss_pred             HHHHHHHHccccCCCCCCC-HHhHHH
Q 003836          747 RFVMVAFWCIQEDPSHRPT-MRKVTQ  771 (792)
Q Consensus       747 ~l~~l~~~Cl~~~p~~RPs-~~evl~  771 (792)
                      .+.+++.+||+.+|.+||+ ++|+++
T Consensus       236 ~~~~li~~~l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        236 NANDFVQSMLKYNINYRLTNYNEIIK  261 (267)
T ss_pred             HHHHHHHHHhccChhhCCchHHHHhc
Confidence            7899999999999999995 699886

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.98  E-value=2.8e-32  Score=290.80  Aligned_cols=260  Identities=19%  Similarity=0.234  Sum_probs=190.6

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccccc--cchHHHHHHHHHhcccC-CCCcccccceeccCCc-----eEE
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ--DSEKEFKAEVNGIGQTH-HKNLVRLLGYCDEGQN-----RLL  576 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~-h~niv~l~g~~~~~~~-----~~l  576 (792)
                      ..+.||+|+||.||+|... .+++.||+|++.....  .....+.+|+.++++++ |+||+++++++...+.     .++
T Consensus         5 ~~~~lg~g~~g~vy~~~~~-~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~l   83 (295)
T cd07837           5 KLEKIGEGTYGKVYKARDK-NTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYL   83 (295)
T ss_pred             EeeEecccCCeEEEEEEEC-CCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEE
Confidence            4568999999999999764 4567899998765322  23467889999999994 6999999999977665     899


Q ss_pred             EEEeccCCCccccccCC-----CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC-CCCeEEeecCCCc
Q 003836          577 VYEFMSNGTVASFLFGD-----SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD-HYNARISDFGLAK  650 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~-~~~~kl~Dfg~a~  650 (792)
                      ||||+++ +|.+++...     ..+++..+..++.||++||.|||+.   +|+||||+|+||+++. ++.+||+|||+++
T Consensus        84 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg~~~  159 (295)
T cd07837          84 VFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLGLGR  159 (295)
T ss_pred             EeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeecccce
Confidence            9999986 788887542     3578999999999999999999998   9999999999999998 8999999999998


Q ss_pred             cccCCCCCccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchh
Q 003836          651 LLTLDQSHTNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLE  729 (792)
Q Consensus       651 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  729 (792)
                      ........ .....+++.|+|||++.+ ..++.++||||||+++|||++|..||...........+.... .........
T Consensus       160 ~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  237 (295)
T cd07837         160 AFSIPVKS-YTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLL-GTPTEQVWP  237 (295)
T ss_pred             ecCCCccc-cCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh-CCCChhhCc
Confidence            65432211 122346788999998865 467999999999999999999999986543221111110000 000000000


Q ss_pred             Hh---hh----c----hhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          730 AL---VE----N----DLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       730 ~~---~~----~----~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ..   ..    +    ............++.+++.+||+.+|.+||+++|++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~  290 (295)
T cd07837         238 GVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT  290 (295)
T ss_pred             chhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            00   00    0    0000001124567889999999999999999999987

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.98  E-value=4.2e-32  Score=291.42  Aligned_cols=247  Identities=25%  Similarity=0.309  Sum_probs=193.8

Q ss_pred             HhhhhhhcCccccceEEEeeecCCCceEEEEEEcccc---cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEE
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV---FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~  578 (792)
                      ++...+.||+|++|.||+|... .+++.+++|++...   .....+++.+|++++++++|+|++++++++......++||
T Consensus        16 ~~~~~~~lg~g~~g~v~~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   94 (308)
T cd06634          16 LFSDLREIGHGSFGAVYFARDV-RNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM   94 (308)
T ss_pred             HHHHHHheeeCCCEEEEEEEEc-CCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence            3444578999999999999764 44678999988642   2233457889999999999999999999999999999999


Q ss_pred             EeccCCCccccccC-CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC
Q 003836          579 EFMSNGTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       579 E~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      ||+. |+|.+++.. ...+++..+..++.|++.||.|||+.   +++|+||+|+|||++.++.+||+|||++......  
T Consensus        95 e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~--  168 (308)
T cd06634          95 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--  168 (308)
T ss_pred             EccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecCc--
Confidence            9997 577776643 45688999999999999999999998   9999999999999999999999999998765322  


Q ss_pred             CccccccccCCcccccccc---cCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhc
Q 003836          658 HTNTAIRGTKGYVAPEWFR---NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEN  734 (792)
Q Consensus       658 ~~~~~~~gt~~y~aPE~~~---~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  734 (792)
                         ....+++.|+|||.+.   ...++.++|||||||++|||++|+.|+..........   .             +...
T Consensus       169 ---~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~---~-------------~~~~  229 (308)
T cd06634         169 ---NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY---H-------------IAQN  229 (308)
T ss_pred             ---ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHH---H-------------Hhhc
Confidence               2345788999999974   3568899999999999999999999986532111000   0             0000


Q ss_pred             hhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhc
Q 003836          735 DLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE  774 (792)
Q Consensus       735 ~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~  774 (792)
                      .............+.+++.+||+.+|++||+++++++...
T Consensus       230 ~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~  269 (308)
T cd06634         230 ESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF  269 (308)
T ss_pred             CCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcc
Confidence            0011112234567889999999999999999999998643

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.98  E-value=8.1e-33  Score=297.06  Aligned_cols=243  Identities=23%  Similarity=0.327  Sum_probs=205.3

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccccc--chHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~--~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .+.+.||+|.|++|.++... .++..||+|.+++..-.  ....+.+|+++|..++|||||+++.+......+|+||||.
T Consensus        59 ~i~~tig~g~f~~V~La~~~-~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya  137 (596)
T KOG0586|consen   59 VIIKTIGKGNFAKVKLARHI-LTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYA  137 (596)
T ss_pred             eeeeeeccceeEEEEeeEec-CCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEec
Confidence            34578999999999999765 45789999999875433  2345889999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      .+|.+.++|.++....+.....++.|+..|++|+|++   .|+|||||++||||+.+.++||+|||++..+.  ......
T Consensus       138 ~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~--~~~~lq  212 (596)
T KOG0586|consen  138 SGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFD--YGLMLQ  212 (596)
T ss_pred             cCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeec--cccccc
Confidence            9999999999998888899999999999999999999   99999999999999999999999999999875  334455


Q ss_pred             cccccCCcccccccccCCC-CcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc--
Q 003836          662 AIRGTKGYVAPEWFRNMPI-TVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA--  738 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~~-~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  738 (792)
                      ..+|++.|.|||++.+.++ ++++|+||+|++||-|+.|..||+...-..                    +-...+..  
T Consensus       213 t~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~--------------------Lr~rvl~gk~  272 (596)
T KOG0586|consen  213 TFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKE--------------------LRPRVLRGKY  272 (596)
T ss_pred             ccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccc--------------------ccchheeeee
Confidence            6789999999999998776 489999999999999999999998542211                    11111111  


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ..+.-.+.++-++++++|-.+|.+|++++++.+.
T Consensus       273 rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~  306 (596)
T KOG0586|consen  273 RIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD  306 (596)
T ss_pred             cccceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence            1233345678889999999999999999999864

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.98  E-value=6.8e-32  Score=294.12  Aligned_cols=273  Identities=20%  Similarity=0.272  Sum_probs=197.2

Q ss_pred             hhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccC------CceEEE
Q 003836          506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEG------QNRLLV  577 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~------~~~~lV  577 (792)
                      .+.||+|+||.||+|... .+++.+|+|++....  ......+.+|+.++++++|+||+++++++...      ...++|
T Consensus        20 ~~~ig~g~~g~v~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv   98 (342)
T cd07879          20 LKQVGSGAYGSVCSAIDK-RTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLV   98 (342)
T ss_pred             EEEeeecCCeEEEEEEeC-CCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEE
Confidence            367999999999999753 456789999986532  22345688999999999999999999998654      346899


Q ss_pred             EEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC
Q 003836          578 YEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      +||+.. +|..++  ...+++..+..++.|+++||+|||+.   +|+||||||+|||++.++.+||+|||+++.....  
T Consensus        99 ~e~~~~-~l~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~--  170 (342)
T cd07879          99 MPYMQT-DLQKIM--GHPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGLARHADAE--  170 (342)
T ss_pred             eccccc-CHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC--
Confidence            999974 666654  23578899999999999999999998   9999999999999999999999999998764321  


Q ss_pred             CccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH-------HHHhhcccchh
Q 003836          658 HTNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW-------AYDRYQERTLE  729 (792)
Q Consensus       658 ~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~-------~~~~~~~~~~~  729 (792)
                        .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...............       ...........
T Consensus       171 --~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (342)
T cd07879         171 --MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAK  248 (342)
T ss_pred             --CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchH
Confidence              223457889999999876 46899999999999999999999999754321110000000       00000000000


Q ss_pred             Hhhhch--h-ccc---CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH--hccCcCCCCCCCCCCCC
Q 003836          730 ALVEND--L-EAM---NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM--LEGVVEVPIPPCPWTLN  789 (792)
Q Consensus       730 ~~~~~~--~-~~~---~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~--L~~~~~~~~p~~P~~~~  789 (792)
                      ......  . ...   .......++.+++.+||+.||.+||+++|+++.  ++...+.+..+.|.+.+
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~~~~~~~~~~~  316 (342)
T cd07879         249 SYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDADEETEQQPYD  316 (342)
T ss_pred             HHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccccccCCCCccc
Confidence            010000  0 000   001234568899999999999999999999965  77776665555555443

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.98  E-value=3.8e-32  Score=290.85  Aligned_cols=263  Identities=22%  Similarity=0.275  Sum_probs=194.1

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCC--------
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQ--------  572 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~--------  572 (792)
                      +.+.+.||+|+||.||+|... .+++.||+|+++...  ......+.+|++++++++||||+++++++.+..        
T Consensus         9 ~~~~~~lg~g~~g~v~~~~~~-~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~   87 (302)
T cd07864           9 FDIIGQIGEGTYGQVYKARDK-DTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKD   87 (302)
T ss_pred             hheeeeecccCCEEEEEEEEC-CCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhcccc
Confidence            445678999999999999865 345789999987532  233457788999999999999999999987654        


Q ss_pred             --ceEEEEEeccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCC
Q 003836          573 --NRLLVYEFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLA  649 (792)
Q Consensus       573 --~~~lV~E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a  649 (792)
                        ..++|+||+++ +|..++... ..+++..+..++.||+.||+|||+.   +|+|+||||+||++++++.+||+|||++
T Consensus        88 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~  163 (302)
T cd07864          88 KGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIKLADFGLA  163 (302)
T ss_pred             CCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEEeCccccc
Confidence              78999999987 666666543 4689999999999999999999998   9999999999999999999999999999


Q ss_pred             ccccCCCCCccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcc--c
Q 003836          650 KLLTLDQSHTNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQE--R  726 (792)
Q Consensus       650 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--~  726 (792)
                      ...............++..|+|||.+.+ ..++.++|||||||+++||++|+.||...........+..........  .
T Consensus       164 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (302)
T cd07864         164 RLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWP  243 (302)
T ss_pred             ccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcc
Confidence            8765433222233346778999998865 457899999999999999999999997543221111111100000000  0


Q ss_pred             chhHh-----------hhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          727 TLEAL-----------VENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       727 ~~~~~-----------~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .+...           ........ ....+..+.+++.+||+.+|++||+++++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  298 (302)
T cd07864         244 DVIKLPYFNTMKPKKQYRRRLREE-FSFIPTPALDLLDHMLTLDPSKRCTAEEALN  298 (302)
T ss_pred             cccccccccccccccccccchhhh-cCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            00000           00000000 0113567889999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.98  E-value=4e-32  Score=287.60  Aligned_cols=261  Identities=21%  Similarity=0.274  Sum_probs=198.2

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccccc--chHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~--~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      ..+.||+|++|.||++... .+++.+++|++......  ....+.+|++++++++|+||+++++++..+...++|+||++
T Consensus         3 ~~~~i~~g~~~~v~~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   81 (283)
T cd05118           3 KLGKIGEGTYGVVYKARDK-LTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMD   81 (283)
T ss_pred             cceeeecCCCceEEEEEcC-CCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccC
Confidence            3467999999999999754 45678999998754332  45678899999999999999999999999999999999998


Q ss_pred             CCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          583 NGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       583 ~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      + +|.+++... ..+++..+..++.||+.||.|||+.   +|+|+||||+||+++.++.+||+|||.+....... ....
T Consensus        82 ~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~-~~~~  156 (283)
T cd05118          82 T-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPV-RPYT  156 (283)
T ss_pred             C-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-cccc
Confidence            6 888887664 5789999999999999999999998   99999999999999999999999999998765443 1222


Q ss_pred             cccccCCcccccccccC-CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH-------HHHhhcc---cchhH
Q 003836          662 AIRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW-------AYDRYQE---RTLEA  730 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~-------~~~~~~~---~~~~~  730 (792)
                      ...++..|+|||.+.+. .++.++||||||+++|+|++|+.||...............       .+....+   .....
T Consensus       157 ~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (283)
T cd05118         157 HYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFS  236 (283)
T ss_pred             CccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhh
Confidence            34578889999998776 7899999999999999999999998654321111000000       0000000   00000


Q ss_pred             hhhchhc--ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          731 LVENDLE--AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       731 ~~~~~~~--~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      +.+....  .......+.++.+++.+||+.+|.+||++++++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         237 FPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA  279 (283)
T ss_pred             hccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence            0000000  0011235678999999999999999999999987

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.98  E-value=6.6e-32  Score=290.76  Aligned_cols=260  Identities=17%  Similarity=0.159  Sum_probs=192.1

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccc--cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCC
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV--FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNG  584 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~g  584 (792)
                      +.+|.|+++.|+++..   +++.+|||++...  .....+.+.+|++++++++|+||+++++++.+.+..+++|||+++|
T Consensus         8 ~~~~~~~~v~~~~~~~---~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~   84 (314)
T cd08216           8 KCFEDLMIVHLAKHKP---TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYG   84 (314)
T ss_pred             HhhcCCceEEEEEecC---CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCC
Confidence            4455666666666542   5678999998754  3445578999999999999999999999999999999999999999


Q ss_pred             CccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC-----
Q 003836          585 TVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS-----  657 (792)
Q Consensus       585 sL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~-----  657 (792)
                      +|.+++...  ..+++.....++.|+++||+|||+.   +|+|+||||+||+++.++.+||+|||.+........     
T Consensus        85 ~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~  161 (314)
T cd08216          85 SCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVV  161 (314)
T ss_pred             CHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecccccccccc
Confidence            999999754  4578889999999999999999998   999999999999999999999999998875532211     


Q ss_pred             -CccccccccCCccccccccc--CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhh-HHHHHHHhhcc-------c
Q 003836          658 -HTNTAIRGTKGYVAPEWFRN--MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAI-LTDWAYDRYQE-------R  726 (792)
Q Consensus       658 -~~~~~~~gt~~y~aPE~~~~--~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~-~~~~~~~~~~~-------~  726 (792)
                       .......++..|+|||.+..  ..++.++|||||||++|||++|+.||........... ...........       .
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (314)
T cd08216         162 HDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYED  241 (314)
T ss_pred             ccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcC
Confidence             11123446788999999875  3588999999999999999999999975432211000 00000000000       0


Q ss_pred             chh--------HhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          727 TLE--------ALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       727 ~~~--------~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ...        .................++.+++.+||+.+|++|||++++++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  295 (314)
T cd08216         242 SMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH  295 (314)
T ss_pred             CcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence            000        0000011111233456788999999999999999999999973

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.98  E-value=3.5e-32  Score=283.41  Aligned_cols=245  Identities=23%  Similarity=0.373  Sum_probs=200.8

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccccc--cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ--DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.||+|++|.||++... .+++.+++|++.....  ...+.+.+|++++++++|+|++++++.+..+...++|+||++
T Consensus         4 ~~~~l~~g~~~~v~~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~   82 (258)
T cd08215           4 IIKQIGKGSFGKVYLVRRK-SDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYAD   82 (258)
T ss_pred             EEeeeccCCCeEEEEEEEc-CCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecC
Confidence            4567999999999999765 3567899999876433  456678999999999999999999999999999999999999


Q ss_pred             CCCccccccCC----CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          583 NGTVASFLFGD----SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       583 ~gsL~~~l~~~----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      +++|.+++...    ..+++..+..++.+++.||.|||+.   +++|+||+|+||++++++.++|+|||.+....... .
T Consensus        83 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-~  158 (258)
T cd08215          83 GGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV-D  158 (258)
T ss_pred             CCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccCc-c
Confidence            99999998763    6789999999999999999999998   99999999999999999999999999998765433 1


Q ss_pred             ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          659 TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      ......+++.|+|||.+....++.++||||+|+++++|++|+.||.......   .    ..         ...... ..
T Consensus       159 ~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~---~----~~---------~~~~~~-~~  221 (258)
T cd08215         159 LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLE---L----AL---------KILKGQ-YP  221 (258)
T ss_pred             eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHH---H----HH---------HHhcCC-CC
Confidence            2233468889999999988889999999999999999999999986542110   0    00         001110 11


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ..+......+.+++.+||+.+|++||++.|+++
T Consensus       222 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~  254 (258)
T cd08215         222 PIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ  254 (258)
T ss_pred             CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            112234567889999999999999999999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.98  E-value=2.2e-32  Score=296.72  Aligned_cols=268  Identities=21%  Similarity=0.273  Sum_probs=204.0

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCC-----ceEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQ-----NRLL  576 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~-----~~~l  576 (792)
                      .+.+.||+|++|.||+++.. ..++.+++|++....  ....+.+.+|+.++++++|+||+++++++....     ..++
T Consensus         3 ~i~~~ig~g~~~~v~~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~l   81 (330)
T cd07834           3 ELLKPIGSGAYGVVCSAVDK-RTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYI   81 (330)
T ss_pred             eeeeeecCCCCeEEEEEEeC-CCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEE
Confidence            35578999999999999754 446789999987654  344578999999999999999999999998775     7899


Q ss_pred             EEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC
Q 003836          577 VYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~  656 (792)
                      ||||+++ +|.+++.....+++..+..++.||+.||+|||+.   +|+|+||||+|||++.++.++|+|||++.......
T Consensus        82 v~e~~~~-~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~  157 (330)
T cd07834          82 VTELMET-DLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDE  157 (330)
T ss_pred             Eecchhh-hHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEeecccc
Confidence            9999984 8999988777899999999999999999999998   99999999999999999999999999998765443


Q ss_pred             C--CccccccccCCcccccccccC-CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHH-------HHhhccc
Q 003836          657 S--HTNTAIRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWA-------YDRYQER  726 (792)
Q Consensus       657 ~--~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~-------~~~~~~~  726 (792)
                      .  .......++..|+|||.+.+. .++.++||||||+++++|++|+.||...........+....       .......
T Consensus       158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  237 (330)
T cd07834         158 DEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSE  237 (330)
T ss_pred             cccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhcccc
Confidence            1  122334578899999999887 89999999999999999999999996553321111100000       0000011


Q ss_pred             chhHhhhchh-ccc-----CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH--hccC
Q 003836          727 TLEALVENDL-EAM-----NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM--LEGV  776 (792)
Q Consensus       727 ~~~~~~~~~~-~~~-----~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~--L~~~  776 (792)
                      .....+.... ...     ........+.+++.+||+.+|.+||+++++++.  +++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~  295 (330)
T cd07834         238 KARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQL  295 (330)
T ss_pred             chhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhh
Confidence            1111111000 000     011245678899999999999999999999985  4444

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.98  E-value=8.1e-33  Score=272.14  Aligned_cols=280  Identities=22%  Similarity=0.316  Sum_probs=202.2

Q ss_pred             hhhhhcCccccceEEEeeecCCC---ceEEEEEEcccccc--cchHHHHHHHHHhcccCCCCcccccceecc-CCceEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGS---SNHVAVKKLNSVFQ--DSEKEFKAEVNGIGQTHHKNLVRLLGYCDE-GQNRLLV  577 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~---~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~-~~~~~lV  577 (792)
                      +....||+|.||.|||++-.+..   .+.+|+|+++....  .......+|+.+++.++|+||+.|..++.. +..++|+
T Consensus        27 e~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~  106 (438)
T KOG0666|consen   27 EGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWLL  106 (438)
T ss_pred             hccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEE
Confidence            34567999999999999654332   23799999975422  234567899999999999999999999977 7889999


Q ss_pred             EEeccCCCccccccCC-----CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC----CCeEEeecCC
Q 003836          578 YEFMSNGTVASFLFGD-----SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH----YNARISDFGL  648 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~----~~~kl~Dfg~  648 (792)
                      +||.+. +|...++-+     +.++......|+.||+.|+.|||+.   -|+||||||.|||+..+    |.+||+|||+
T Consensus       107 fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKIaDlGl  182 (438)
T KOG0666|consen  107 FDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKIADLGL  182 (438)
T ss_pred             ehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEeecccH
Confidence            999988 787777532     3578889999999999999999999   99999999999999877    8999999999


Q ss_pred             CccccCCCCC--ccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhh------H----
Q 003836          649 AKLLTLDQSH--TNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAI------L----  715 (792)
Q Consensus       649 a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~------~----  715 (792)
                      ++.+...-..  ....++-|.-|+|||.+.+ ..||.+.|||+.|||..||+|-+..|.....+.+...      +    
T Consensus       183 aR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf  262 (438)
T KOG0666|consen  183 ARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIF  262 (438)
T ss_pred             HHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHH
Confidence            9998654332  3345677999999999877 5699999999999999999999887755432221110      0    


Q ss_pred             --------HHHHHHhhcccchhHhhhc-hhcccCCH----------HHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          716 --------TDWAYDRYQERTLEALVEN-DLEAMNNV----------TMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       716 --------~~~~~~~~~~~~~~~~~~~-~~~~~~~~----------~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                              ..|+.-.-- ......+.. +...-.+.          ...+...+|...+|+.||.+|.|+++.++.. -.
T Consensus       263 ~vLG~Pt~~~Wp~lkk~-Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~-yF  340 (438)
T KOG0666|consen  263 EVLGTPTDKDWPDLKKM-PEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHP-YF  340 (438)
T ss_pred             HHcCCCccccchhhhhC-cchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccc-cc
Confidence                    011110000 000000000 00000000          0122367899999999999999999776632 24


Q ss_pred             cCCCCCCCCCCCC
Q 003836          777 VEVPIPPCPWTLN  789 (792)
Q Consensus       777 ~~~~~p~~P~~~~  789 (792)
                      .+-+.||.|..-+
T Consensus       341 ~~d~lpp~pt~~~  353 (438)
T KOG0666|consen  341 TEDPLPPLPTSDN  353 (438)
T ss_pred             ccCCCCCCcccce
Confidence            5667777776543

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.98  E-value=4.8e-32  Score=291.19  Aligned_cols=263  Identities=22%  Similarity=0.276  Sum_probs=192.7

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccc--cchHHHHHHHHHhcccCCCCcccccceeccC--CceEEEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ--DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEG--QNRLLVYE  579 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~--~~~~lV~E  579 (792)
                      .+.+.||+|+||.||+|... .+++.||+|+++....  .....+.+|+.++++++|+||+++++++.+.  +..++|||
T Consensus        10 ~~~~~ig~g~~~~v~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e   88 (309)
T cd07845          10 EKLNRIGEGTYGIVYRARDT-TSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVME   88 (309)
T ss_pred             eEeeeeeecCCEEEEEEEEC-CCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEe
Confidence            34567999999999999764 4567899999864322  2234567899999999999999999998655  46899999


Q ss_pred             eccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          580 FMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       580 ~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      |+++ +|.+++... ..+++..+..++.||++||+|||+.   +++|+||||+||++++++.+||+|||+++....... 
T Consensus        89 ~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~-  163 (309)
T cd07845          89 YCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAK-  163 (309)
T ss_pred             cCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeecCCccC-
Confidence            9975 788877653 5689999999999999999999998   999999999999999999999999999987653321 


Q ss_pred             ccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH-------HHHhhcccch-h
Q 003836          659 TNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW-------AYDRYQERTL-E  729 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~-------~~~~~~~~~~-~  729 (792)
                      ......+++.|+|||.+.+ ..++.++||||||+++|||++|+.||...............       .+........ .
T Consensus       164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (309)
T cd07845         164 PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVG  243 (309)
T ss_pred             CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccc
Confidence            2222345788999999865 56899999999999999999999999754332211111110       0000000000 0


Q ss_pred             Hhhh--chhcc--cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          730 ALVE--NDLEA--MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       730 ~~~~--~~~~~--~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .+..  .....  .........+.+++.+||+.||++|||++|+++.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h  290 (309)
T cd07845         244 KFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES  290 (309)
T ss_pred             cccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            0000  00000  0001135677899999999999999999999974

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.98  E-value=3.9e-32  Score=295.39  Aligned_cols=261  Identities=21%  Similarity=0.248  Sum_probs=194.8

Q ss_pred             hhhcCccccceEEEeeecCCCceEEEEEEcccccccc--------------hHHHHHHHHHhcccCCCCcccccceeccC
Q 003836          506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS--------------EKEFKAEVNGIGQTHHKNLVRLLGYCDEG  571 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~--------------~~~~~~Ei~~l~~l~h~niv~l~g~~~~~  571 (792)
                      .+.||+|+||+||++... ..++.||+|++.......              ...+.+|++++++++|+||+++++++...
T Consensus        14 ~~~ig~G~~g~vy~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   92 (335)
T PTZ00024         14 GAHLGEGTYGKVEKAYDT-LTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEG   92 (335)
T ss_pred             hhcccCCCceeEEEEEEC-CCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecC
Confidence            467999999999999754 456789999986532221              12578999999999999999999999999


Q ss_pred             CceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCcc
Q 003836          572 QNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKL  651 (792)
Q Consensus       572 ~~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~  651 (792)
                      +..++||||++ |+|.+++.....+++.....++.|++.||.|||+.   +|+|+||+|+||+++.++.+||+|||+++.
T Consensus        93 ~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~kl~dfg~~~~  168 (335)
T PTZ00024         93 DFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICKIADFGLARR  168 (335)
T ss_pred             CcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEEECCccceee
Confidence            99999999997 58999998777889999999999999999999998   999999999999999999999999999986


Q ss_pred             ccCCC-------------CCccccccccCCcccccccccC-CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHH
Q 003836          652 LTLDQ-------------SHTNTAIRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTD  717 (792)
Q Consensus       652 ~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~  717 (792)
                      .....             ........+++.|+|||.+.+. .++.++||||||+++|||++|+.||...........+..
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~  248 (335)
T PTZ00024        169 YGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFE  248 (335)
T ss_pred             cccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            54111             1111223467889999998764 478999999999999999999999965533211111100


Q ss_pred             HHH----Hhhcccc-h------hHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          718 WAY----DRYQERT-L------EALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       718 ~~~----~~~~~~~-~------~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ...    ..+.... +      ......... ........++.+++..||+.+|++||+++|++..
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~  313 (335)
T PTZ00024        249 LLGTPNEDNWPQAKKLPLYTEFTPRKPKDLK-TIFPNASDDAIDLLQSLLKLNPLERISAKEALKH  313 (335)
T ss_pred             HhCCCchhhCcchhhcccccccCcCCcccHH-HhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence            000    0000000 0      000000000 0011235678899999999999999999999975

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.98  E-value=2.7e-32  Score=296.70  Aligned_cols=264  Identities=21%  Similarity=0.283  Sum_probs=194.4

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccC-----CceEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEG-----QNRLLV  577 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~-----~~~~lV  577 (792)
                      .+.++||+|+||.||+|... .+++.||+|++.... ......+.+|+.++++++|+||+++++++...     ...++|
T Consensus         8 ~i~~~lg~G~~g~vy~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv   86 (336)
T cd07849           8 QNLSYIGEGAYGMVCSATHK-PTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIV   86 (336)
T ss_pred             EEEEEEEecCCeEEEEEEEc-CCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEE
Confidence            34578999999999999654 556789999986432 23345688899999999999999999987544     357999


Q ss_pred             EEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC
Q 003836          578 YEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      +||+++ +|.+++. ...+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++.......
T Consensus        87 ~e~~~~-~l~~~~~-~~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~  161 (336)
T cd07849          87 QELMET-DLYKLIK-TQHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHD  161 (336)
T ss_pred             ehhccc-CHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccceeecccccc
Confidence            999975 7777764 35688999999999999999999998   999999999999999999999999999987543222


Q ss_pred             C--ccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcc---cchhHh
Q 003836          658 H--TNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQE---RTLEAL  731 (792)
Q Consensus       658 ~--~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  731 (792)
                      .  ......+++.|+|||.+.+ ..++.++|||||||++|||++|+.||............    ......   .....+
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~----~~~~~~~~~~~~~~~  237 (336)
T cd07849         162 HTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLI----LGVLGTPSQEDLNCI  237 (336)
T ss_pred             ccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH----HHHcCCCCHHHHHHh
Confidence            1  1123467899999998754 56899999999999999999999999643211100000    000000   000000


Q ss_pred             hhch---------hccc-----CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH--hccCc
Q 003836          732 VEND---------LEAM-----NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM--LEGVV  777 (792)
Q Consensus       732 ~~~~---------~~~~-----~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~--L~~~~  777 (792)
                      ....         ....     .....+.++.+++.+||+.+|++|||+.|+++.  ++...
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~  299 (336)
T cd07849         238 ISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH  299 (336)
T ss_pred             hchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence            0000         0000     011235678899999999999999999999987  55543

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.98  E-value=2.6e-32  Score=288.45  Aligned_cols=246  Identities=24%  Similarity=0.347  Sum_probs=201.1

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccc---cccchHHHHHHHHHhcccC-CCCcccccceeccCCceEEEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV---FQDSEKEFKAEVNGIGQTH-HKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~-h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      .+.+.||+|++|.||++... .+++.+++|++...   .....+.+.+|++++++++ |+||+++++++.+++..++|||
T Consensus         4 ~~~~~lg~g~~~~vy~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e   82 (280)
T cd05581           4 KFGKIIGEGSFSTVVLAKEK-ETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLE   82 (280)
T ss_pred             eEeeeecCCCceEEEEEEEc-CCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEc
Confidence            34578999999999999764 45678999998652   2233567889999999998 9999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC--
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS--  657 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~--  657 (792)
                      |+++++|.+++.....+++..+..++.|++.||.|||+.   +++|+||+|+||+++.++.++|+|||++........  
T Consensus        83 ~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~  159 (280)
T cd05581          83 YAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPE  159 (280)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccCCccccc
Confidence            999999999998887899999999999999999999998   999999999999999999999999999987643321  


Q ss_pred             -----------------CccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHH
Q 003836          658 -----------------HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAY  720 (792)
Q Consensus       658 -----------------~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~  720 (792)
                                       .......++..|+|||.+....++.++||||||++++++++|+.||........   +     
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~---~-----  231 (280)
T cd05581         160 SNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLT---F-----  231 (280)
T ss_pred             cCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHH---H-----
Confidence                             112234578899999999888899999999999999999999999975432100   0     


Q ss_pred             HhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCH----HhHHH
Q 003836          721 DRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTM----RKVTQ  771 (792)
Q Consensus       721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~----~evl~  771 (792)
                              ..+.  ......+....+.+.+++.+||+.+|++||++    +++++
T Consensus       232 --------~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~  276 (280)
T cd05581         232 --------QKIL--KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA  276 (280)
T ss_pred             --------HHHH--hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence                    0011  11112223346678899999999999999999    77765

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.98  E-value=2.7e-32  Score=290.84  Aligned_cols=262  Identities=23%  Similarity=0.294  Sum_probs=191.6

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccc--cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ--DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .+.+.||+|++|+||+|... .+++.+|+|++.....  ...+.+.+|++++++++|+||+++++++......++||||+
T Consensus         5 ~~~~~l~~g~~~~v~~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   83 (294)
T PLN00009          5 EKVEKIGEGTYGVVYKARDR-VTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYL   83 (294)
T ss_pred             EEEEEecCCCCEEEEEEEec-CCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEecc
Confidence            34578999999999999754 4567899999865322  23467889999999999999999999999999999999999


Q ss_pred             cCCCccccccCCC--CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC-CCCeEEeecCCCccccCCCCC
Q 003836          582 SNGTVASFLFGDS--KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD-HYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       582 ~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~-~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      + ++|.+++....  ..++.....++.||+.||+|||++   +++|+||+|+||+++. ++.+||+|||+++....... 
T Consensus        84 ~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~-  158 (294)
T PLN00009         84 D-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVR-  158 (294)
T ss_pred             c-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCCCcc-
Confidence            6 47877775443  357788889999999999999998   9999999999999985 56799999999976543211 


Q ss_pred             ccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHH----Hhhcc-cchhHhh
Q 003836          659 TNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAY----DRYQE-RTLEALV  732 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~  732 (792)
                      ......+++.|+|||.+.+ ..++.++||||||+++|+|+||+.||.................    ..+.. ..+....
T Consensus       159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (294)
T PLN00009        159 TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYK  238 (294)
T ss_pred             ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhh
Confidence            1223356889999998866 4578999999999999999999999975433211110000000    00000 0000000


Q ss_pred             h--chhcc----cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          733 E--NDLEA----MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       733 ~--~~~~~----~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .  +....    ......+.++.+++.+||+.+|++||++.++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        239 SAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE  283 (294)
T ss_pred             hhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence            0  00000    011223566889999999999999999999997

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.98  E-value=5.3e-32  Score=286.50  Aligned_cols=260  Identities=24%  Similarity=0.306  Sum_probs=198.2

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.||+|++|.||+|+.. .+++.+++|++....  ....+.+.+|+.++++++|+||+++++++.+....++|+||++
T Consensus         3 ~~~~ig~g~~~~vy~~~~~-~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   81 (282)
T cd07829           3 KLEKLGEGTYGVVYKARDK-KTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD   81 (282)
T ss_pred             eehcccccCcceEEEeeec-CCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC
Confidence            3467999999999999764 446789999987653  3335678899999999999999999999999999999999998


Q ss_pred             CCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          583 NGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       583 ~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                       ++|.+++... ..+++..+.+++.|+++||+|||+.   +|+|+||+|+||++++++.+||+|||.++....... ...
T Consensus        82 -~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-~~~  156 (282)
T cd07829          82 -MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR-TYT  156 (282)
T ss_pred             -cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCcc-ccC
Confidence             5899999776 5789999999999999999999998   999999999999999999999999999987643322 222


Q ss_pred             cccccCCcccccccccC-CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH-------HHHhhc-----ccch
Q 003836          662 AIRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW-------AYDRYQ-----ERTL  728 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~-------~~~~~~-----~~~~  728 (792)
                      ...++..|+|||.+.+. .++.++||||||++++||++|+.||...............       .+....     ....
T Consensus       157 ~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (282)
T cd07829         157 HEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTF  236 (282)
T ss_pred             ccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccc
Confidence            23457789999998766 8899999999999999999999998664322111111000       000000     0000


Q ss_pred             hHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          729 EALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       729 ~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .......... ........+.+++.+||+.+|++||++++++.
T Consensus       237 ~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         237 PKFPPKDLEK-VLPRLDPEGIDLLSKMLQYNPAKRISAKEALK  278 (282)
T ss_pred             cccCccchHH-hcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence            0000000000 01122567899999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.98  E-value=1.2e-31  Score=288.59  Aligned_cols=240  Identities=27%  Similarity=0.350  Sum_probs=189.4

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccc---cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ---DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      ++||+|+||+||+|+.. .+++.+++|++.....   .....+.+|++++++++|+|++++++++.+.+..++||||+. 
T Consensus        27 ~~lg~g~~g~v~~~~~~-~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-  104 (313)
T cd06633          27 HEIGHGSFGAVYFATNS-HTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL-  104 (313)
T ss_pred             eeeccCCCeEEEEEEEC-CCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC-
Confidence            56999999999999754 4567899999864322   233568899999999999999999999999999999999996 


Q ss_pred             CCccccccC-CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          584 GTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       584 gsL~~~l~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      |+|.+++.. ...+++..+..++.||+.||.|||+.   +++|+||+|+||+++.++.+||+|||++.....     ...
T Consensus       105 ~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~-----~~~  176 (313)
T cd06633         105 GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSP-----ANS  176 (313)
T ss_pred             CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCC-----CCC
Confidence            477776654 45689999999999999999999998   999999999999999999999999999864321     223


Q ss_pred             ccccCCcccccccc---cCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          663 IRGTKGYVAPEWFR---NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       663 ~~gt~~y~aPE~~~---~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      ..++..|+|||.+.   ...++.++||||||+++|||++|+.|+..........       ....         ......
T Consensus       177 ~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~-------~~~~---------~~~~~~  240 (313)
T cd06633         177 FVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY-------HIAQ---------NDSPTL  240 (313)
T ss_pred             ccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHH-------HHHh---------cCCCCC
Confidence            45788999999984   4668899999999999999999999986542211100       0000         000001


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ........+.+++.+||+.+|.+||++.+++..
T Consensus       241 ~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~  273 (313)
T cd06633         241 QSNEWTDSFRGFVDYCLQKIPQERPASAELLRH  273 (313)
T ss_pred             CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            111233567889999999999999999999863

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.97  E-value=8.3e-32  Score=289.25  Aligned_cols=264  Identities=20%  Similarity=0.281  Sum_probs=190.9

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCC--------
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQ--------  572 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~--------  572 (792)
                      +.+.++||+|+||.||++... .+++.||||++....  ......+.+|++++++++||||+++++++...+        
T Consensus        14 y~~~~~lg~g~~~~v~~~~~~-~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   92 (310)
T cd07865          14 YEKLAKIGQGTFGEVFKARHK-KTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKG   92 (310)
T ss_pred             eEEEEEeecCCCEEEEEEEEC-CCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCc
Confidence            445578999999999999754 457899999886432  222345678999999999999999999986554        


Q ss_pred             ceEEEEEeccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCcc
Q 003836          573 NRLLVYEFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKL  651 (792)
Q Consensus       573 ~~~lV~E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~  651 (792)
                      ..++||||+.+ +|.+++... ..+++..+..++.||+.||.|||+.   +++|+||||+||+++.++.+||+|||++..
T Consensus        93 ~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~  168 (310)
T cd07865          93 SFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADFGLARA  168 (310)
T ss_pred             eEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcCCCccc
Confidence            35999999975 777777554 3689999999999999999999998   999999999999999999999999999987


Q ss_pred             ccCCCCC---ccccccccCCcccccccccC-CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHH----HHhh
Q 003836          652 LTLDQSH---TNTAIRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWA----YDRY  723 (792)
Q Consensus       652 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~----~~~~  723 (792)
                      .......   ......++..|+|||.+.+. .++.++||||||+++|||++|+.||...........+....    ...+
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (310)
T cd07865         169 FSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVW  248 (310)
T ss_pred             ccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhc
Confidence            6433221   11234568889999988664 47899999999999999999999986543221111111100    0000


Q ss_pred             cccchhHhhhc-hhccc---------CCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          724 QERTLEALVEN-DLEAM---------NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       724 ~~~~~~~~~~~-~~~~~---------~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .........+. .....         ........+.+++.+||+.||.+|||++|+++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~  306 (310)
T cd07865         249 PGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN  306 (310)
T ss_pred             ccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence            00000000000 00000         00012346678999999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.97  E-value=1.3e-32  Score=266.22  Aligned_cols=246  Identities=23%  Similarity=0.399  Sum_probs=193.1

Q ss_pred             hhhcCccccceEEEeeecCCCceEEEEEEcccccc-cchHHHHHHHHHhcccC-CCCcccccceeccCCceEEEEEeccC
Q 003836          506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTH-HKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~-h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      ...||.|..|.|++.... .++..+|||.+..... +..+++...+.++.+-+ .|.||+.+|+|..+....+.||.|.-
T Consensus        97 l~dlGsGtcG~V~k~~~r-s~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~  175 (391)
T KOG0983|consen   97 LGDLGSGTCGQVWKMRFR-STGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMST  175 (391)
T ss_pred             HHhhcCCCccceEEEEEc-ccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHH
Confidence            456999999999999775 4567999999976543 44567888888777665 89999999999999999999999854


Q ss_pred             CCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          584 GTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       584 gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                       -++.+|.+- .++++.-.-++...+.+||.||.++  .+|+|||+||+|||+|+.|++||+|||++-.+...  ...+.
T Consensus       176 -C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeK--H~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS--kAhtr  250 (391)
T KOG0983|consen  176 -CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS--KAHTR  250 (391)
T ss_pred             -HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHh--cceeecccCccceEEccCCCEEeecccccceeecc--ccccc
Confidence             455555443 4677888888999999999999998  69999999999999999999999999999876543  33344


Q ss_pred             ccccCCcccccccc---cCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh-cc
Q 003836          663 IRGTKGYVAPEWFR---NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL-EA  738 (792)
Q Consensus       663 ~~gt~~y~aPE~~~---~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  738 (792)
                      ..|-+.|||||.+.   ...|+.++||||||+.|+||.||+.||.....+.+  .+             ..+++... ..
T Consensus       251 sAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe--~l-------------tkvln~ePP~L  315 (391)
T KOG0983|consen  251 SAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFE--VL-------------TKVLNEEPPLL  315 (391)
T ss_pred             ccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHH--HH-------------HHHHhcCCCCC
Confidence            56889999999985   34689999999999999999999999976432211  11             11111110 01


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ......+..+++++..||+.|+.+||...++++.
T Consensus       316 ~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h  349 (391)
T KOG0983|consen  316 PGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH  349 (391)
T ss_pred             CcccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence            1122367889999999999999999999998874

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.6e-32  Score=282.64  Aligned_cols=245  Identities=27%  Similarity=0.323  Sum_probs=202.2

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccc---cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV---FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      ++||+|+||.|+-+... .+++.+|.|++.+.   .+.++....+|-.+|.+++.+.||.+--.|+..+.++||+..|.|
T Consensus       191 RvlGkGGFGEV~acqvr-aTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNG  269 (591)
T KOG0986|consen  191 RVLGKGGFGEVCACQVR-ATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNG  269 (591)
T ss_pred             EEEecccccceeEEEEe-cchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecC
Confidence            57999999999988654 56788999988653   244566788999999999999999999999999999999999999


Q ss_pred             CCccccccCCC--CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          584 GTVASFLFGDS--KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       584 gsL~~~l~~~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      |+|.-+|....  .+++....-.+.+|+-||.+||.+   +||.||+||+|||||+.|+++|+|.|+|..+...+  ..+
T Consensus       270 GDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~--~~~  344 (591)
T KOG0986|consen  270 GDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGK--PIR  344 (591)
T ss_pred             CceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecCCCC--ccc
Confidence            99999998764  788999999999999999999999   99999999999999999999999999998775433  334


Q ss_pred             cccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCC
Q 003836          662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN  741 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  741 (792)
                      ..+||.+|||||++.+..|+...|.|||||+||||+.|+.||...-+....             +.+...+... ...++
T Consensus       345 ~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~-------------eEvdrr~~~~-~~ey~  410 (591)
T KOG0986|consen  345 GRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKR-------------EEVDRRTLED-PEEYS  410 (591)
T ss_pred             cccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhH-------------HHHHHHHhcc-hhhcc
Confidence            447999999999999999999999999999999999999999765333221             1111111111 12245


Q ss_pred             HHHHHHHHHHHHHccccCCCCCC-----CHHhHHH
Q 003836          742 VTMLHRFVMVAFWCIQEDPSHRP-----TMRKVTQ  771 (792)
Q Consensus       742 ~~~~~~l~~l~~~Cl~~~p~~RP-----s~~evl~  771 (792)
                      ...++++.++....|+.||++|.     ..++|.+
T Consensus       411 ~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~  445 (591)
T KOG0986|consen  411 DKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKE  445 (591)
T ss_pred             cccCHHHHHHHHHHHccCHHHhccCCCcCcchhhh
Confidence            56778889999999999999996     3445554

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.6e-31  Score=277.63  Aligned_cols=237  Identities=27%  Similarity=0.303  Sum_probs=194.7

Q ss_pred             cCccccceEEEeeecCCCceEEEEEEcccccc---cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCCC
Q 003836          509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ---DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGT  585 (792)
Q Consensus       509 lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~gs  585 (792)
                      ||+|+||.||++... ..++.+++|.+.....   .....+.+|+.++++++|+||+++++.+..++..++||||+++++
T Consensus         1 lg~G~~~~v~~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~   79 (250)
T cd05123           1 LGKGSFGKVLLVRKK-DTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGE   79 (250)
T ss_pred             CCCCCceEEEEEEEC-CCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCc
Confidence            699999999999764 4567899999875432   245678999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccccccc
Q 003836          586 VASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRG  665 (792)
Q Consensus       586 L~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~g  665 (792)
                      |.+++.....+++..+..++.|++.||.|||+.   +++|+||+|+||+++.++.++|+|||++....... .......+
T Consensus        80 L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~  155 (250)
T cd05123          80 LFSHLSKEGRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-SRTNTFCG  155 (250)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCC-CcccCCcC
Confidence            999998877889999999999999999999998   99999999999999999999999999998764332 12234557


Q ss_pred             cCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHH
Q 003836          666 TKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTML  745 (792)
Q Consensus       666 t~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  745 (792)
                      +..|+|||.+.+...+.++|+||||+++||+++|+.||.......   ..             ..+...  ....+....
T Consensus       156 ~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~---~~-------------~~~~~~--~~~~~~~~~  217 (250)
T cd05123         156 TPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKE---IY-------------EKILKD--PLRFPEFLS  217 (250)
T ss_pred             CccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH---HH-------------HHHhcC--CCCCCCCCC
Confidence            889999999988889999999999999999999999996543210   00             001111  111222335


Q ss_pred             HHHHHHHHHccccCCCCCCCHHh
Q 003836          746 HRFVMVAFWCIQEDPSHRPTMRK  768 (792)
Q Consensus       746 ~~l~~l~~~Cl~~~p~~RPs~~e  768 (792)
                      ..+.+++.+||..+|++||++.+
T Consensus       218 ~~l~~~i~~~l~~~p~~R~~~~~  240 (250)
T cd05123         218 PEARDLISGLLQKDPTKRLGSGG  240 (250)
T ss_pred             HHHHHHHHHHhcCCHhhCCCccc
Confidence            67889999999999999999944

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.97  E-value=8.5e-32  Score=287.36  Aligned_cols=248  Identities=25%  Similarity=0.402  Sum_probs=190.0

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccC-CCCcccccceeccCCceEEEEEec
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTH-HKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~-h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .+.+.||+|++|.||+|... .+++.+|||+++... .....++..|+.++.+.+ |+||+++++++.++...++||||+
T Consensus        18 ~~~~~lg~g~~~~v~~~~~~-~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~   96 (296)
T cd06618          18 ENLGEIGSGTCGQVYKMRFK-KTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELM   96 (296)
T ss_pred             eeeeEeeccCCeEEEEEEEC-CCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeecc
Confidence            45678999999999999765 346789999987543 234456777887777765 999999999999999999999998


Q ss_pred             cCCCccccccC-CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          582 SNGTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       582 ~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      ++ +|.+++.. ...+++..+..++.||++||+|||+.  .+|+||||+|+||++++++.+||+|||++.........  
T Consensus        97 ~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~--  171 (296)
T cd06618          97 ST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAK--  171 (296)
T ss_pred             Cc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECccccchhccCCCcc--
Confidence            64 66666644 35688999999999999999999973  28999999999999999999999999999765432221  


Q ss_pred             ccccccCCcccccccccC----CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          661 TAIRGTKGYVAPEWFRNM----PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~----~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                      ....++..|+|||.+...    .++.++||||||+++|||++|+.||.......+  .+             ..++....
T Consensus       172 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--~~-------------~~~~~~~~  236 (296)
T cd06618         172 TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFE--VL-------------TKILQEEP  236 (296)
T ss_pred             cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHH--HH-------------HHHhcCCC
Confidence            223478899999998754    388999999999999999999999865322110  00             00111100


Q ss_pred             -cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          737 -EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       737 -~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                       ..........++.+++.+||+.+|++||+++++++.
T Consensus       237 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  273 (296)
T cd06618         237 PSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH  273 (296)
T ss_pred             CCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence             000011235678999999999999999999999874

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.97  E-value=1.1e-31  Score=284.75  Aligned_cols=260  Identities=23%  Similarity=0.298  Sum_probs=192.1

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccccc--cchHHHHHHHHHhccc---CCCCcccccceeccCCc-----e
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ--DSEKEFKAEVNGIGQT---HHKNLVRLLGYCDEGQN-----R  574 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l---~h~niv~l~g~~~~~~~-----~  574 (792)
                      +.+.||+|+||.||+|+... +++.+|+|++.....  .....+.+|+.++.++   +|+|++++++++...+.     .
T Consensus         3 ~~~~l~~g~~~~v~~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~   81 (287)
T cd07838           3 ELAEIGEGAYGTVYKARDLN-TGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKL   81 (287)
T ss_pred             EEEEecccCceEEEEEEECC-CCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCcee
Confidence            45679999999999998753 467899999874322  2234566787776655   69999999999987776     8


Q ss_pred             EEEEEeccCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccc
Q 003836          575 LLVYEFMSNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLL  652 (792)
Q Consensus       575 ~lV~E~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~  652 (792)
                      +++|||+++ +|.+++...  ..+++..+..++.||++||.|||+.   +++|+||+|+||+++.++.+||+|||++...
T Consensus        82 ~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~~~~  157 (287)
T cd07838          82 TLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLARIY  157 (287)
T ss_pred             EEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCcceec
Confidence            999999975 888888654  3589999999999999999999998   9999999999999999999999999999876


Q ss_pred             cCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHH----Hhhcccc-
Q 003836          653 TLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAY----DRYQERT-  727 (792)
Q Consensus       653 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~----~~~~~~~-  727 (792)
                      .....  .....++..|+|||.+.+..++.++||||||+++|||++|+.||.................    ..+.... 
T Consensus       158 ~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (287)
T cd07838         158 SFEMA--LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVS  235 (287)
T ss_pred             cCCcc--cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcc
Confidence            43322  1233478899999999998999999999999999999999988875433211110000000    0000000 


Q ss_pred             -hhHhhhchhc---ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          728 -LEALVENDLE---AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       728 -~~~~~~~~~~---~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                       ..........   .....+....+.+++.+||+.+|++||+++|+++
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         236 LPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             cchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence             0000000000   1111234577889999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.97  E-value=1.4e-31  Score=280.01  Aligned_cols=246  Identities=22%  Similarity=0.326  Sum_probs=192.4

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccc-----cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-----FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLV  577 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~-----~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV  577 (792)
                      +.+.++||+|+||.||++.... ....+++|.++..     ......++..|+.++++++||||+++++++.+....++|
T Consensus         2 y~i~~~ig~g~~g~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           2 YILQQRLGKGSFGTVYLVKDKK-AVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             ceeeeeecCCCCceEEEEEecC-CCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            3456789999999999997543 2334555555432     122344677899999999999999999999999999999


Q ss_pred             EEeccCCCccccccC----CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCcccc
Q 003836          578 YEFMSNGTVASFLFG----DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT  653 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~  653 (792)
                      |||+++++|.+++..    ...+++..+..++.|++.||.|||+.   +++|+||+|+||++++ +.+||+|||+++...
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~  156 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM  156 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence            999999999988853    35689999999999999999999998   9999999999999976 569999999998764


Q ss_pred             CCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhh
Q 003836          654 LDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVE  733 (792)
Q Consensus       654 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  733 (792)
                      .... ......+++.|+|||.+.+..++.++|+||||+++|+|++|+.||.........                .... 
T Consensus       157 ~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~----------------~~~~-  218 (260)
T cd08222         157 GSCD-LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVV----------------LRIV-  218 (260)
T ss_pred             CCcc-cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHH----------------HHHH-
Confidence            3322 222345788999999998888999999999999999999999998643211000                0000 


Q ss_pred             chhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          734 NDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       734 ~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .......+...+.++.+++.+||+.+|++||++.|+++
T Consensus       219 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  256 (260)
T cd08222         219 EGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR  256 (260)
T ss_pred             cCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence            01111123345678899999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=4.9e-32  Score=267.65  Aligned_cols=245  Identities=24%  Similarity=0.299  Sum_probs=202.1

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      .|.++||+|.||.|.+++ .+.+++.+|+|++++..   .+....-..|-++|+..+||.+..|.-.|...+++++||||
T Consensus       171 dfLKvLGkGTFGKVIL~r-EKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMey  249 (516)
T KOG0690|consen  171 DFLKVLGKGTFGKVILCR-EKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEY  249 (516)
T ss_pred             hHHHHhcCCccceEEEEe-ecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEE
Confidence            367899999999999985 55678899999998743   33334566788999999999999999999999999999999


Q ss_pred             ccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          581 MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       581 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      ..+|.|.-+|.+.+.+++....-.-..|..||.|||++   +||.||||.+|.|||.+|++||.|||+++.... .....
T Consensus       250 anGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~-~g~t~  325 (516)
T KOG0690|consen  250 ANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK-YGDTT  325 (516)
T ss_pred             ccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhccc-cccee
Confidence            99999999998888888888888889999999999998   999999999999999999999999999986432 23345


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ...+|||.|+|||++....|+.+.|.|.+||++|||++|+.||.......-                .+-++..+++  +
T Consensus       326 kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kL----------------FeLIl~ed~k--F  387 (516)
T KOG0690|consen  326 KTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKL----------------FELILMEDLK--F  387 (516)
T ss_pred             ccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHH----------------HHHHHhhhcc--C
Confidence            568999999999999999999999999999999999999999976543211                1111222221  3


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCC-----CHHhHHH
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRP-----TMRKVTQ  771 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RP-----s~~evl~  771 (792)
                      +...+++...|..-.|..||.+|.     .+.||.+
T Consensus       388 Pr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~  423 (516)
T KOG0690|consen  388 PRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMR  423 (516)
T ss_pred             CccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHh
Confidence            444566777888889999999995     3455544

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.97  E-value=2e-31  Score=286.42  Aligned_cols=263  Identities=22%  Similarity=0.271  Sum_probs=190.1

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccccc--chHHHHHHHHHhcccCCCCcccccceeccCC--------c
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQ--------N  573 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~--~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~--------~  573 (792)
                      .+.++||+|++|.||+|... .+++.+++|++......  ....+.+|++++++++|+||+++++++.+..        .
T Consensus        11 ~~~~~lg~g~~~~v~~~~~~-~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   89 (311)
T cd07866          11 EILGKLGEGTFGEVYKARQI-KTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGS   89 (311)
T ss_pred             EEEEEeccCCCEEEEEEEEC-CCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCce
Confidence            34578999999999999754 45678999988653322  2346789999999999999999999875433        4


Q ss_pred             eEEEEEeccCCCccccccC-CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccc
Q 003836          574 RLLVYEFMSNGTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLL  652 (792)
Q Consensus       574 ~~lV~E~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~  652 (792)
                      .++|+||+.. +|...+.. ...+++..+..++.||++||+|||+.   +|+|+||||+||++++++.+||+|||+++..
T Consensus        90 ~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  165 (311)
T cd07866          90 VYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFGLARPY  165 (311)
T ss_pred             EEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcCccchhc
Confidence            6899999976 66666654 35789999999999999999999998   9999999999999999999999999999865


Q ss_pred             cCCCCC----------ccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHH-
Q 003836          653 TLDQSH----------TNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAY-  720 (792)
Q Consensus       653 ~~~~~~----------~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~-  720 (792)
                      ......          ..+...+++.|+|||.+.+ ..++.++||||||+++|||++|+.||...........+..... 
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~  245 (311)
T cd07866         166 DGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGT  245 (311)
T ss_pred             cCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence            432211          1123456888999998765 4589999999999999999999999865433211111100000 


Q ss_pred             ---Hhhcc-cchhHhh----hchhcc---cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          721 ---DRYQE-RTLEALV----ENDLEA---MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       721 ---~~~~~-~~~~~~~----~~~~~~---~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                         ..+.. ..+....    ......   .......+.+.+++.+||+.+|++|||+.|++.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~  307 (311)
T cd07866         246 PTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE  307 (311)
T ss_pred             CChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence               00000 0000000    000000   000122367889999999999999999999987

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.97  E-value=2.6e-31  Score=289.51  Aligned_cols=264  Identities=19%  Similarity=0.228  Sum_probs=191.9

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccC-----------
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEG-----------  571 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~-----------  571 (792)
                      +.+.+.||+|+||.||+|... .+++.||+|++........+.+.+|++++++++|+||+++++++...           
T Consensus         7 y~~~~~Lg~g~~g~vy~~~~~-~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~   85 (342)
T cd07854           7 YMDLRPLGCGSNGLVFSAVDS-DCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSL   85 (342)
T ss_pred             eEEEEEecCCCCEEEEEEEEC-CCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccc
Confidence            344578999999999999653 45679999998766556667899999999999999999999876543           


Q ss_pred             ---CceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEc-CCCCeEEeecC
Q 003836          572 ---QNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLD-DHYNARISDFG  647 (792)
Q Consensus       572 ---~~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~-~~~~~kl~Dfg  647 (792)
                         ...++|+||++ ++|.+++.. ..+++.....++.||+.||.|||+.   +|+||||||+||+++ +++.+||+|||
T Consensus        86 ~~~~~~~lv~e~~~-~~L~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~kl~dfg  160 (342)
T cd07854          86 TELNSVYIVQEYME-TDLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLKIGDFG  160 (342)
T ss_pred             cccceEEEEeeccc-ccHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEEECCcc
Confidence               35789999997 488887754 4578999999999999999999998   999999999999997 45678999999


Q ss_pred             CCccccCCCCCc--cccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHH-HH----
Q 003836          648 LAKLLTLDQSHT--NTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTD-WA----  719 (792)
Q Consensus       648 ~a~~~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~-~~----  719 (792)
                      +++.........  .....++..|+|||.+.. ..++.++|||||||++|||++|+.||.............. .+    
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  240 (342)
T cd07854         161 LARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVRE  240 (342)
T ss_pred             cceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence            998654322111  122357889999998654 5688999999999999999999999965432211111000 00    


Q ss_pred             --HHhhcccchhHhhhchhcccC-----CHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          720 --YDRYQERTLEALVENDLEAMN-----NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       720 --~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                        .....................     ......++.+++.+||+.+|.+|||++|+++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  300 (342)
T cd07854         241 EDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH  300 (342)
T ss_pred             HHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence              000000000000000000000     11234678899999999999999999999863

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.97  E-value=3.7e-33  Score=269.14  Aligned_cols=258  Identities=28%  Similarity=0.379  Sum_probs=199.8

Q ss_pred             CccccCHHHHHHHHhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccc-cchHHHHHHHHHhccc-CCCCcccccc
Q 003836          489 NLRCFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQT-HHKNLVRLLG  566 (792)
Q Consensus       489 ~~~~~~~~el~~~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l-~h~niv~l~g  566 (792)
                      +...|+-.+|++.     ..||.|+||+|+|-. +..+++.+|||+++.... ..++++..|.+...+- +.||||+++|
T Consensus        57 ~~~~F~~~~Lqdl-----g~iG~G~fG~V~KM~-hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyG  130 (361)
T KOG1006|consen   57 HLHTFTSDNLQDL-----GEIGNGAFGTVNKML-HKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYG  130 (361)
T ss_pred             cccccccchHHHH-----HHhcCCcchhhhhhh-cCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhh
Confidence            3445665565543     469999999999985 457789999999986544 5677899999876654 7999999999


Q ss_pred             eeccCCceEEEEEeccCCCcccccc-----CCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCe
Q 003836          567 YCDEGQNRLLVYEFMSNGTVASFLF-----GDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNA  641 (792)
Q Consensus       567 ~~~~~~~~~lV~E~~~~gsL~~~l~-----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~  641 (792)
                      .+..+..-++.||.|+- ||+.+..     .+..+++.-.-.|.....+||.||.+.  ..||||||||+|||||..|.+
T Consensus       131 a~F~EGdcWiCMELMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr~G~v  207 (361)
T KOG1006|consen  131 ALFSEGDCWICMELMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLDRHGDV  207 (361)
T ss_pred             hhhcCCceeeeHHHHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEecCCCE
Confidence            99999999999999965 7776653     235788888888999999999999987  689999999999999999999


Q ss_pred             EEeecCCCccccCCCCCccccccccCCccccccccc--CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHH
Q 003836          642 RISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN--MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWA  719 (792)
Q Consensus       642 kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~  719 (792)
                      ||+|||++-.+..  +...+.-.|-..|||||.+..  ..|+.++||||||++|+|+.||+.|+..-.+..++       
T Consensus       208 KLCDFGIcGqLv~--SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeq-------  278 (361)
T KOG1006|consen  208 KLCDFGICGQLVD--SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQ-------  278 (361)
T ss_pred             eeecccchHhHHH--HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHH-------
Confidence            9999999876532  223344458889999999853  45999999999999999999999998643222111       


Q ss_pred             HHhhcccchhHhhhchh----cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          720 YDRYQERTLEALVENDL----EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       720 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                              +..++..+.    ......+.+..++.++-.||..|.++||...++.++
T Consensus       279 --------l~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~  327 (361)
T KOG1006|consen  279 --------LCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF  327 (361)
T ss_pred             --------HHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence                    111111111    111123467788999999999999999999988753

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.97  E-value=1.1e-32  Score=287.14  Aligned_cols=243  Identities=24%  Similarity=0.354  Sum_probs=197.0

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccc--cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCC
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV--FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNG  584 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~g  584 (792)
                      ++||+|-||+||-|+.. .+++.||||++.+.  ....+.++.+|+.+|++++||.||.+--.|+..+..++|||-+.+.
T Consensus       570 evLGSGQFG~VYgg~hR-ktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD  648 (888)
T KOG4236|consen  570 EVLGSGQFGTVYGGKHR-KTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD  648 (888)
T ss_pred             hhccCCcceeeecceec-ccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence            68999999999999765 56789999999763  3455678999999999999999999999999999999999999765


Q ss_pred             CccccccC-CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC---CCeEEeecCCCccccCCCCCcc
Q 003836          585 TVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH---YNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       585 sL~~~l~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~---~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      -|.-.|.. ..++++..-..++.||+.||.|||.+   +|+|+||||+||||...   -.+||+|||.|++.....  -.
T Consensus       649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks--FR  723 (888)
T KOG4236|consen  649 MLEMILSSEKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS--FR  723 (888)
T ss_pred             HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecchhh--hh
Confidence            55555543 36788888888999999999999999   99999999999999755   369999999999875332  33


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ..++|||.|+|||+++++.|...-|+||.||++|--++|..||....+..++.....             ++-+   ...
T Consensus       724 rsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAa-------------FMyP---p~P  787 (888)
T KOG4236|consen  724 RSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAA-------------FMYP---PNP  787 (888)
T ss_pred             hhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccc-------------cccC---CCc
Confidence            457899999999999999999999999999999999999999975433222111100             1111   000


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      =.+.+...+++|...||..-++|-|.++.+.
T Consensus       788 W~eis~~AidlIn~LLqVkm~kRysvdk~ls  818 (888)
T KOG4236|consen  788 WSEISPEAIDLINNLLQVKMRKRYSVDKSLS  818 (888)
T ss_pred             hhhcCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence            1245567889999999999999999987765

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.97  E-value=8.1e-32  Score=264.05  Aligned_cols=243  Identities=21%  Similarity=0.242  Sum_probs=193.3

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhccc-CCCCcccccceecc----CCceEEEEEec
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDE----GQNRLLVYEFM  581 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~----~~~~~lV~E~~  581 (792)
                      ++||-|-.|.|-.+. +..+++.+|+|++...     ....+|++..-+. .|+|||.+++++..    .+.+++|||.|
T Consensus        68 qvLG~GinGkV~~C~-~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~m  141 (400)
T KOG0604|consen   68 QVLGAGINGKVVQCV-HKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECM  141 (400)
T ss_pred             hhhccccCCceEEEE-eccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecc
Confidence            689999999999885 4567789999998653     4567888876665 59999999998854    45678999999


Q ss_pred             cCCCccccccCCC--CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC---CCCeEEeecCCCccccCCC
Q 003836          582 SNGTVASFLFGDS--KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD---HYNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       582 ~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~---~~~~kl~Dfg~a~~~~~~~  656 (792)
                      +||.|...+.++.  .+++++..+|+.||+.|+.|||+.   .|.||||||+|+|...   |-.+||+|||+|+.-..  
T Consensus       142 eGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~--  216 (400)
T KOG0604|consen  142 EGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQE--  216 (400)
T ss_pred             cchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEecccccccccCC--
Confidence            9999999997764  589999999999999999999998   9999999999999974   45699999999997543  


Q ss_pred             CCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          657 SHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       657 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                      .....+.+-||.|.|||++...+|+...|+||+||++|-|++|-.||.........            .+.-..+.....
T Consensus       217 ~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~ais------------pgMk~rI~~gqy  284 (400)
T KOG0604|consen  217 PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS------------PGMKRRIRTGQY  284 (400)
T ss_pred             CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCC------------hhHHhHhhccCc
Confidence            23334556799999999999999999999999999999999999999765432111            011111111111


Q ss_pred             cccCC--HHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          737 EAMNN--VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       737 ~~~~~--~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .-..+  ...++...++++.+|..+|.+|.|+.|++..
T Consensus       285 ~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h  322 (400)
T KOG0604|consen  285 EFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH  322 (400)
T ss_pred             cCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence            11111  2356788899999999999999999999874

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.97  E-value=7.6e-32  Score=291.19  Aligned_cols=238  Identities=24%  Similarity=0.260  Sum_probs=195.7

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEEEec
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +.+...+|.|+|+.|-++.. ..+.+..+||++.+.    ..+..+|+.++.+. +|+||+++.+.+.++.+.++|||.+
T Consensus       324 y~~~~~~~~gs~s~~~~~~~-~~t~~~~~vkii~~~----~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l  398 (612)
T KOG0603|consen  324 YEFREELGEGSFSAVKYCES-SPTDQEPAVKIISKR----ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELL  398 (612)
T ss_pred             hccccccCCCCccceeeeec-cccccchhheecccc----ccccccccchhhhhcCCCcceeecceecCCceeeeeehhc
Confidence            34556799999999999864 456678999999765    23456677666665 7999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEE-cCCCCeEEeecCCCccccCCCCCcc
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILL-DDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl-~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      .++-|.+.+....... ..+..|+.+|+.|+.|||++   ++|||||||+|||+ ++.++++|+|||.++.....    .
T Consensus       399 ~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~----~  470 (612)
T KOG0603|consen  399 DGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS----C  470 (612)
T ss_pred             cccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhCchh----h
Confidence            9998888887665555 77778999999999999999   99999999999999 58899999999999987654    2


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ...+-|..|.|||++....+++++|+||||++||+|++|+.||.....+                   .++......+..
T Consensus       471 ~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-------------------~ei~~~i~~~~~  531 (612)
T KOG0603|consen  471 DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-------------------IEIHTRIQMPKF  531 (612)
T ss_pred             cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-------------------HHHHHhhcCCcc
Confidence            2334588999999999999999999999999999999999999765443                   111112222223


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ....+....+|+.+||+.||.+||+|.++...
T Consensus       532 s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h  563 (612)
T KOG0603|consen  532 SECVSDEAKDLLQQLLQVDPALRLGADEIGAH  563 (612)
T ss_pred             ccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence            35567788999999999999999999999874

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=7.4e-32  Score=304.87  Aligned_cols=264  Identities=20%  Similarity=0.225  Sum_probs=214.7

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccc---cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV---FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      .+.++||+|+||.|..++. ..+++.+|+|++.+.   .+....-|.+|-.+|..-+.+=|+.++-.|.+..++|+||||
T Consensus        78 eilKvIGrGaFGEV~lVr~-k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMdY  156 (1317)
T KOG0612|consen   78 EILKVIGRGAFGEVALVRH-KSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMDY  156 (1317)
T ss_pred             HHHHHhcccccceeEEEEe-eccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEec
Confidence            3468899999999999875 466789999999873   344556799999999998999999999999999999999999


Q ss_pred             ccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          581 MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       581 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      |+||+|-.+|.+..++++.....++..|.-||.-||+.   |+|||||||+|||||..|++||+|||.+-.+..+..-..
T Consensus       157 ~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s  233 (1317)
T KOG0612|consen  157 MPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRS  233 (1317)
T ss_pred             ccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccchhHHhcCCCCcEEe
Confidence            99999999998777899999999999999999999998   999999999999999999999999999988877766666


Q ss_pred             ccccccCCcccccccc----c-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          661 TAIRGTKGYVAPEWFR----N-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~----~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                      ...+|||-|.+||+++    + +.|++.+|.||+||++|||+.|..||..+.-......+..+              ...
T Consensus       234 ~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~h--------------k~~  299 (1317)
T KOG0612|consen  234 SVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNH--------------KES  299 (1317)
T ss_pred             ccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhch--------------hhh
Confidence            6778999999999985    3 57999999999999999999999999765332221111111              111


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCCC---HHhHHHHh-------ccCcCCCCCCCCC
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPT---MRKVTQML-------EGVVEVPIPPCPW  786 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs---~~evl~~L-------~~~~~~~~p~~P~  786 (792)
                      +..+...+.++...+||+..+. +|+.|..   ++++....       +.+.+..+|-.|-
T Consensus       300 l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W~~iR~~~pP~vPe  359 (1317)
T KOG0612|consen  300 LSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDWDNIRESVPPVVPE  359 (1317)
T ss_pred             cCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCChhhhhhcCCCCCCc
Confidence            1222223467778888888775 6788887   88888753       4456666666664

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.97  E-value=5.1e-31  Score=285.36  Aligned_cols=258  Identities=22%  Similarity=0.264  Sum_probs=191.0

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceecc-CCceEEEEEec
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDE-GQNRLLVYEFM  581 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~-~~~~~lV~E~~  581 (792)
                      +.+.||+|+||.||++... .+++.+|+|++....  ....+.+.+|++++++++||||+++++++.. ....++|+||+
T Consensus        14 ~~~~ig~g~~g~v~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~   92 (328)
T cd07856          14 DLQPVGMGAFGLVCSARDQ-LTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELL   92 (328)
T ss_pred             EEEeecccCCeEEEEEEEC-CCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeehh
Confidence            4578999999999999643 456789999886432  2345678899999999999999999998865 56789999998


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                       +++|.+++.. ..+++.....++.|++.||+|||+.   +|+|+||+|+|||+++++.+||+|||.++....    ...
T Consensus        93 -~~~L~~~~~~-~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~----~~~  163 (328)
T cd07856          93 -GTDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLARIQDP----QMT  163 (328)
T ss_pred             -ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCccccccccCC----CcC
Confidence             4588887754 3567888889999999999999998   999999999999999999999999999875422    112


Q ss_pred             cccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHH-------HHhhcccchhHhhh
Q 003836          662 AIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWA-------YDRYQERTLEALVE  733 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~  733 (792)
                      ...++..|+|||.+.+ ..++.++||||||++++||++|+.||...........+....       ...........+..
T Consensus       164 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (328)
T cd07856         164 GYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQ  243 (328)
T ss_pred             CCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHh
Confidence            3456889999998866 568999999999999999999999986543211111111000       00000011111111


Q ss_pred             c-hhcccCC-----HHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          734 N-DLEAMNN-----VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       734 ~-~~~~~~~-----~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      . ......+     ......+.+++.+||+.+|++||++++++..
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         244 SLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             hccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            0 0011111     1234678999999999999999999999875

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.97  E-value=1.1e-31  Score=292.01  Aligned_cols=197  Identities=29%  Similarity=0.407  Sum_probs=170.4

Q ss_pred             hhhcCccccceEEEeeecCCCceEEEEEEcccccc-cchHHHHHHHHHhcccCCCCcccccceeccCC------ceEEEE
Q 003836          506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQ------NRLLVY  578 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~------~~~lV~  578 (792)
                      .+.||+|+||.||+|. +..+++.||||.+.+... ...+...+|++++++++|+|||++.+.-++..      ...+||
T Consensus        18 ~e~LG~Ga~g~V~rgr-nketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvm   96 (732)
T KOG4250|consen   18 DERLGKGAFGNVYRGR-NKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVM   96 (732)
T ss_pred             hhhhcCCccceeeeec-ccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEE
Confidence            4679999999999996 456789999999987543 33456789999999999999999999876544      568999


Q ss_pred             EeccCCCccccccCC---CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEc--CCC--CeEEeecCCCcc
Q 003836          579 EFMSNGTVASFLFGD---SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLD--DHY--NARISDFGLAKL  651 (792)
Q Consensus       579 E~~~~gsL~~~l~~~---~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~--~~~--~~kl~Dfg~a~~  651 (792)
                      |||.+|||...|.+.   ..+++...+.+..+++.||.|||+.   +|+||||||.||++-  ++|  .-||+|||.||.
T Consensus        97 EyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Are  173 (732)
T KOG4250|consen   97 EYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARE  173 (732)
T ss_pred             eecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeeccccccc
Confidence            999999999999764   4689999999999999999999998   999999999999984  333  479999999998


Q ss_pred             ccCCCCCccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchh
Q 003836          652 LTLDQSHTNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEIS  708 (792)
Q Consensus       652 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~  708 (792)
                      +..+.  ....+.||+.|++||.+.. +.|+..+|.|||||++||.+||..||.+...
T Consensus       174 l~d~s--~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~  229 (732)
T KOG4250|consen  174 LDDNS--LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGG  229 (732)
T ss_pred             CCCCC--eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCC
Confidence            76443  5667889999999999985 8899999999999999999999999976543

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.97  E-value=9.2e-31  Score=284.11  Aligned_cols=265  Identities=21%  Similarity=0.241  Sum_probs=192.2

Q ss_pred             hhhhhcCccccceEEEeeecCC-CceEEEEEEccccc--ccchHHHHHHHHHhccc-CCCCcccccceecc----CCceE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMG-SSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDE----GQNRL  575 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~-~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~----~~~~~  575 (792)
                      .+.+.||+|+||.||++..... .+..+|+|++....  ....+.+.+|+++++++ +|+||+++++.+..    ....+
T Consensus         3 ~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~   82 (332)
T cd07857           3 ELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELY   82 (332)
T ss_pred             eEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEE
Confidence            3457899999999999976432 15689999987532  22356788999999999 59999999987543    24578


Q ss_pred             EEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCC
Q 003836          576 LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD  655 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~  655 (792)
                      +++||+. ++|.+++.....+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus        83 ~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~  158 (332)
T cd07857          83 LYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLARGFSEN  158 (332)
T ss_pred             EEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCceecccc
Confidence            8889886 58999998778899999999999999999999998   9999999999999999999999999999876432


Q ss_pred             CCC---ccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH-------HHHhhc
Q 003836          656 QSH---TNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW-------AYDRYQ  724 (792)
Q Consensus       656 ~~~---~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~-------~~~~~~  724 (792)
                      ...   ......|++.|+|||.+.+ ..++.++|||||||++|+|++|+.||...............       ......
T Consensus       159 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (332)
T cd07857         159 PGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIG  238 (332)
T ss_pred             cccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhh
Confidence            221   1223468999999998765 56899999999999999999999998654321100000000       000000


Q ss_pred             ccchhHhhhchhc-cc-----CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          725 ERTLEALVENDLE-AM-----NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       725 ~~~~~~~~~~~~~-~~-----~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ............. ..     ........+.+++.+||+.+|.+|||+.++++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~  292 (332)
T cd07857         239 SPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH  292 (332)
T ss_pred             hhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            0000000000000 00     001124678899999999999999999998853

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.97  E-value=3.8e-31  Score=272.68  Aligned_cols=221  Identities=20%  Similarity=0.143  Sum_probs=177.8

Q ss_pred             cccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCCCcccccc
Q 003836          512 GAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLF  591 (792)
Q Consensus       512 G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~  591 (792)
                      |.++.||++.. ..+++.+|+|++....     .+.+|...+....||||+++++++.+.+..++||||+++|+|.+++.
T Consensus         4 g~~~~v~~~~~-~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~   77 (237)
T cd05576           4 GVIDKVLLVMD-TRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHIS   77 (237)
T ss_pred             cccceEEEEEE-ccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHH
Confidence            88999999965 4556789999987542     33445555556679999999999999999999999999999999997


Q ss_pred             CCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccccccccCCccc
Q 003836          592 GDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVA  671 (792)
Q Consensus       592 ~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~a  671 (792)
                      ....+++..+..++.|++.||.|||+.   +|+||||||+||+++.++.++++|||.+......    .....++..|+|
T Consensus        78 ~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----~~~~~~~~~y~a  150 (237)
T cd05576          78 KFLNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----CDGEAVENMYCA  150 (237)
T ss_pred             HhcCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc----cccCCcCccccC
Confidence            777789999999999999999999998   9999999999999999999999999988655432    122335678999


Q ss_pred             ccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHH
Q 003836          672 PEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMV  751 (792)
Q Consensus       672 PE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  751 (792)
                      ||.+....++.++||||+|+++|||++|+.|+........                      .......+......+.++
T Consensus       151 PE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~l  208 (237)
T cd05576         151 PEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGIN----------------------THTTLNIPEWVSEEARSL  208 (237)
T ss_pred             CcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc----------------------cccccCCcccCCHHHHHH
Confidence            9999888899999999999999999999987643211100                      000001122345678899


Q ss_pred             HHHccccCCCCCCCHH
Q 003836          752 AFWCIQEDPSHRPTMR  767 (792)
Q Consensus       752 ~~~Cl~~~p~~RPs~~  767 (792)
                      +.+||+.||++||++.
T Consensus       209 i~~~l~~dp~~R~~~~  224 (237)
T cd05576         209 LQQLLQFNPTERLGAG  224 (237)
T ss_pred             HHHHccCCHHHhcCCC
Confidence            9999999999999973

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.97  E-value=7.4e-31  Score=286.08  Aligned_cols=258  Identities=22%  Similarity=0.274  Sum_probs=192.8

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCc------eEE
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQN------RLL  576 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~------~~l  576 (792)
                      +.+.||+|++|.||+|... .+++.+|+|++....  ....+.+.+|+.++++++|+||+++++++...+.      .++
T Consensus        19 ~~~~ig~g~~g~vy~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~l   97 (343)
T cd07851          19 NLSPVGSGAYGQVCSAFDT-KTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYL   97 (343)
T ss_pred             EEEEeccCCceEEEEEEEC-CCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEE
Confidence            4567999999999999764 356789999986532  2334667889999999999999999998876654      899


Q ss_pred             EEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC
Q 003836          577 VYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~  656 (792)
                      |+||+ +++|.+++.. ..+++..+..++.|+++||.|||+.   +|+|+||||+||++++++.+||+|||++...... 
T Consensus        98 v~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~-  171 (343)
T cd07851          98 VTHLM-GADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE-  171 (343)
T ss_pred             EEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccccccccccc-
Confidence            99998 5689888865 4689999999999999999999998   9999999999999999999999999999865432 


Q ss_pred             CCccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH-------HHHhhcccch
Q 003836          657 SHTNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW-------AYDRYQERTL  728 (792)
Q Consensus       657 ~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~-------~~~~~~~~~~  728 (792)
                         .....++..|+|||.+.+ ..++.++||||||+++||+++|+.||...........+...       ..........
T Consensus       172 ---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  248 (343)
T cd07851         172 ---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESA  248 (343)
T ss_pred             ---ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhH
Confidence               223457889999999865 46789999999999999999999999654322111100000       0000111111


Q ss_pred             hHhhhchhcc---c---CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          729 EALVENDLEA---M---NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       729 ~~~~~~~~~~---~---~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ..++......   .   .....+.++.+++.+||+.+|.+|||+.||++.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h  298 (343)
T cd07851         249 RNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH  298 (343)
T ss_pred             HHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence            1111110000   0   001235788999999999999999999999873

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.97  E-value=2e-31  Score=303.88  Aligned_cols=245  Identities=28%  Similarity=0.395  Sum_probs=182.1

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceecc---------------
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDE---------------  570 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~---------------  570 (792)
                      +.||+||||.|||++ ++-+++.+|||++.... ...-..+.+|+.++++|+|||||+++....+               
T Consensus       485 ~lLGkGGFG~VvkVR-NKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~~~  563 (1351)
T KOG1035|consen  485 ELLGKGGFGSVVKVR-NKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVASDS  563 (1351)
T ss_pred             HHhcCCCCceEEEEe-ecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccccccch
Confidence            469999999999996 44567899999997653 2334568899999999999999998621100               


Q ss_pred             ---------------------------------------------------------------C----------------
Q 003836          571 ---------------------------------------------------------------G----------------  571 (792)
Q Consensus       571 ---------------------------------------------------------------~----------------  571 (792)
                                                                                     +                
T Consensus       564 ~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~~d  643 (1351)
T KOG1035|consen  564 ESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVILD  643 (1351)
T ss_pred             hhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCccccC
Confidence                                                                           0                


Q ss_pred             -------------------------CceEEEEEeccCCCccccccCCCCC-chhHHHHHHHHHHHHHHHHhhccCCCeEe
Q 003836          572 -------------------------QNRLLVYEFMSNGTVASFLFGDSKP-NWKLRTEIAMGIAGGLFYLHEECCTQIIH  625 (792)
Q Consensus       572 -------------------------~~~~lV~E~~~~gsL~~~l~~~~~l-~~~~~~~i~~~ia~gL~yLH~~~~~~ivH  625 (792)
                                               ..+||-||||+...|++++.++... .....++++++|+.||+|+|++   +|||
T Consensus       644 ~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~---giIH  720 (1351)
T KOG1035|consen  644 DTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQ---GIIH  720 (1351)
T ss_pred             cchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhC---ceee
Confidence                                     1246789999988888887766544 5667889999999999999999   9999


Q ss_pred             cCCCCCcEEEcCCCCeEEeecCCCcccc-----------------CCCCCccccccccCCcccccccccC---CCCcccc
Q 003836          626 CDIKPQNILLDDHYNARISDFGLAKLLT-----------------LDQSHTNTAIRGTKGYVAPEWFRNM---PITVKVD  685 (792)
Q Consensus       626 ~dikp~NILl~~~~~~kl~Dfg~a~~~~-----------------~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~k~D  685 (792)
                      |||||.||+||++..+||+|||+|....                 .......+..+||.-|+|||++.+.   .|+.|+|
T Consensus       721 RDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiD  800 (1351)
T KOG1035|consen  721 RDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKID  800 (1351)
T ss_pred             ccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhh
Confidence            9999999999999999999999998721                 0111234567899999999999765   4999999


Q ss_pred             eehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCC
Q 003836          686 VYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPT  765 (792)
Q Consensus       686 V~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs  765 (792)
                      +||+|||++||+.   ||....+-.  ..+     ...+.+.+..-      .....+....-..++.++++.||++|||
T Consensus       801 mYSLGIVlFEM~y---PF~TsMERa--~iL-----~~LR~g~iP~~------~~f~~~~~~~e~slI~~Ll~hdP~kRPt  864 (1351)
T KOG1035|consen  801 MYSLGIVLFEMLY---PFGTSMERA--SIL-----TNLRKGSIPEP------ADFFDPEHPEEASLIRWLLSHDPSKRPT  864 (1351)
T ss_pred             hHHHHHHHHHHhc---cCCchHHHH--HHH-----HhcccCCCCCC------cccccccchHHHHHHHHHhcCCCccCCC
Confidence            9999999999986   344322110  111     11122211111      1112233445568999999999999999


Q ss_pred             HHhHHH
Q 003836          766 MRKVTQ  771 (792)
Q Consensus       766 ~~evl~  771 (792)
                      +.|++.
T Consensus       865 A~eLL~  870 (1351)
T KOG1035|consen  865 ATELLN  870 (1351)
T ss_pred             HHHHhh
Confidence            999986

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.8e-31  Score=271.04  Aligned_cols=241  Identities=26%  Similarity=0.337  Sum_probs=202.3

Q ss_pred             HHhhhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhccc-CCCCcccccceeccCCceEE
Q 003836          501 VTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLL  576 (792)
Q Consensus       501 ~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~l  576 (792)
                      ...+|..+||+|+||.|.++. ..++.+.+|||++++..   .+..+--+.|-++|+.. +-|.++++..+|..-+.+|+
T Consensus       349 tDFnFl~VlGKGSFGKVlLae-rkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF  427 (683)
T KOG0696|consen  349 TDFNFLMVLGKGSFGKVLLAE-RKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF  427 (683)
T ss_pred             cccceEEEeccCccceeeeec-ccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence            345788999999999999995 55777899999998642   23344456788888876 57889999999999999999


Q ss_pred             EEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC
Q 003836          577 VYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~  656 (792)
                      ||||+.+|+|--+++.-.++.++...-+|..||-||-+||++   +||.||||..|||||.+|.+||+|||+++.-.- .
T Consensus       428 VMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~-~  503 (683)
T KOG0696|consen  428 VMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF-D  503 (683)
T ss_pred             EEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeeccccccccc-C
Confidence            999999999999998888899999999999999999999999   999999999999999999999999999985322 2


Q ss_pred             CCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          657 SHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       657 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                      .....+.+|||.|+|||++...+|+..+|.|||||+||||+.|+.||+.+.+..-..                .+.+.  
T Consensus       504 ~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~----------------aI~eh--  565 (683)
T KOG0696|consen  504 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQ----------------AIMEH--  565 (683)
T ss_pred             CcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHH----------------HHHHc--
Confidence            234456889999999999999999999999999999999999999998765432211                11221  


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCCCC
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSHRP  764 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RP  764 (792)
                      .-.++...+.+.+.++...|...|.+|.
T Consensus       566 nvsyPKslSkEAv~ickg~ltK~P~kRL  593 (683)
T KOG0696|consen  566 NVSYPKSLSKEAVAICKGLLTKHPGKRL  593 (683)
T ss_pred             cCcCcccccHHHHHHHHHHhhcCCcccc
Confidence            1235667778889999999999999994

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.97  E-value=1.2e-30  Score=284.70  Aligned_cols=267  Identities=23%  Similarity=0.280  Sum_probs=193.1

Q ss_pred             HHHHHHHhhh--hhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccC
Q 003836          496 KELVEVTRGF--KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEG  571 (792)
Q Consensus       496 ~el~~~~~~~--~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~  571 (792)
                      .++...+++|  .+.||+|+||.||++... .+++.||+|++....  ....+.+.+|+.++++++|+||+++++++...
T Consensus        10 ~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~   88 (345)
T cd07877          10 KTIWEVPERYQNLSPVGSGAYGSVCAAFDT-KTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA   88 (345)
T ss_pred             HHHhhccCceEEEEEeeecCCeEEEEEEEc-CCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence            4444454554  367999999999999653 456789999987532  22346788999999999999999999988533


Q ss_pred             ------CceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEee
Q 003836          572 ------QNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISD  645 (792)
Q Consensus       572 ------~~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~D  645 (792)
                            ...+++++++ +++|.+++.. ..+++..+..++.||++||+|||+.   +|+||||||+||++++++.+||+|
T Consensus        89 ~~~~~~~~~~lv~~~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~d  163 (345)
T cd07877          89 RSLEEFNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILD  163 (345)
T ss_pred             ccccccccEEEEehhc-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCEEEec
Confidence                  3467888876 7788887754 3588999999999999999999998   999999999999999999999999


Q ss_pred             cCCCccccCCCCCccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHH-------
Q 003836          646 FGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTD-------  717 (792)
Q Consensus       646 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~-------  717 (792)
                      ||+++....    ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||..............       
T Consensus       164 fg~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  239 (345)
T cd07877         164 FGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA  239 (345)
T ss_pred             ccccccccc----cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence            999876432    1223457889999999866 5688999999999999999999999864322111000000       


Q ss_pred             HHHHhhcccchhHhhhc---hhccc---CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          718 WAYDRYQERTLEALVEN---DLEAM---NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       718 ~~~~~~~~~~~~~~~~~---~~~~~---~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ..............+..   .....   .......++.+++.+||+.+|.+||++.++++.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h  300 (345)
T cd07877         240 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  300 (345)
T ss_pred             HHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence            00000000000011000   00000   000134568899999999999999999999875

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.97  E-value=1.6e-30  Score=283.36  Aligned_cols=258  Identities=24%  Similarity=0.255  Sum_probs=190.7

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCC------ceEE
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQ------NRLL  576 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~------~~~l  576 (792)
                      ..+.||+|+||.||++... .+++.||||++....  ....+.+.+|+.++++++|+||+++++++....      ..++
T Consensus        19 ~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~l   97 (343)
T cd07880          19 DLKQVGSGAYGTVCSALDR-RTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYL   97 (343)
T ss_pred             EEEEeeecCCeEEEEEEEC-CCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEE
Confidence            3467999999999999754 456789999986432  223456889999999999999999999986553      3589


Q ss_pred             EEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC
Q 003836          577 VYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~  656 (792)
                      ||||+ +++|.+++.. ..+++..+..++.||++||+|||+.   +|+||||||+||+++.++.+||+|||+++..... 
T Consensus        98 v~e~~-~~~l~~~~~~-~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~-  171 (343)
T cd07880          98 VMPFM-GTDLGKLMKH-EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQTDSE-  171 (343)
T ss_pred             EEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccccccccC-
Confidence            99999 6788888754 5688999999999999999999998   9999999999999999999999999999865322 


Q ss_pred             CCccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH-------HHHhhcccch
Q 003836          657 SHTNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW-------AYDRYQERTL  728 (792)
Q Consensus       657 ~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~-------~~~~~~~~~~  728 (792)
                         .....+++.|+|||.+.+ ..++.++||||||+++++|++|+.||...............       ..........
T Consensus       172 ---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (343)
T cd07880         172 ---MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDA  248 (343)
T ss_pred             ---ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhH
Confidence               223457889999999876 46889999999999999999999999754321110000000       0000000001


Q ss_pred             hHhhhchhcc------cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          729 EALVENDLEA------MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       729 ~~~~~~~~~~------~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ..........      .........+.+++.+|++.||++|||+.++++.
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~  298 (343)
T cd07880         249 KNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH  298 (343)
T ss_pred             HHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            1111100000      0011234568899999999999999999999953

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.97  E-value=2.1e-31  Score=270.37  Aligned_cols=270  Identities=19%  Similarity=0.263  Sum_probs=205.1

Q ss_pred             ccCHHHHHHHHhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccC--CCC----ccccc
Q 003836          492 CFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH--HKN----LVRLL  565 (792)
Q Consensus       492 ~~~~~el~~~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~--h~n----iv~l~  565 (792)
                      .|...+.....+.+...+|+|.||.|-++..+. .+..||||+++... ...+..+-|+++++++.  .|+    +|.+.
T Consensus        80 v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~-~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~  157 (415)
T KOG0671|consen   80 VYQVGDILTNRYEIVDLLGEGTFGKVVECWDRE-TKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMR  157 (415)
T ss_pred             EEEeccccccceehhhhhcCCcccceEEEeecC-CCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeee
Confidence            455666667778888999999999999986554 47899999998763 33456778999999993  233    78899


Q ss_pred             ceeccCCceEEEEEeccCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC------
Q 003836          566 GYCDEGQNRLLVYEFMSNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD------  637 (792)
Q Consensus       566 g~~~~~~~~~lV~E~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~------  637 (792)
                      ++|.-.++.+||+|.+ |-|+.++|..+  .+++..++..|+.|++++++|||+.   +++|.||||+|||+.+      
T Consensus       158 ~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~  233 (415)
T KOG0671|consen  158 DWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKT  233 (415)
T ss_pred             hhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEE
Confidence            9999999999999998 45999999876  4678899999999999999999998   9999999999999941      


Q ss_pred             --------------CCCeEEeecCCCccccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCC
Q 003836          638 --------------HYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNI  703 (792)
Q Consensus       638 --------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~  703 (792)
                                    +..+||+|||.|+.-....    ..++.|..|+|||++.+-.++.++||||+||||.|+.||...|
T Consensus       234 ~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LF  309 (415)
T KOG0671|consen  234 YNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLF  309 (415)
T ss_pred             eccCCccceeccCCCcceEEEecCCcceeccCc----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceec
Confidence                          3458999999998643322    5567899999999999999999999999999999999999988


Q ss_pred             CcchhhhhhhhH----HHHHHHhhc---------cc-----------chhHhhhchh----cccCCHHHHHHHHHHHHHc
Q 003836          704 DNEISKVDKAIL----TDWAYDRYQ---------ER-----------TLEALVENDL----EAMNNVTMLHRFVMVAFWC  755 (792)
Q Consensus       704 ~~~~~~~~~~~~----~~~~~~~~~---------~~-----------~~~~~~~~~~----~~~~~~~~~~~l~~l~~~C  755 (792)
                      ......+.....    ...+.....         .+           +...+.+...    .......+..+|++|+..+
T Consensus       310 qtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~m  389 (415)
T KOG0671|consen  310 QTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRM  389 (415)
T ss_pred             ccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHH
Confidence            654432221111    000000000         00           0011111100    0112234667899999999


Q ss_pred             cccCCCCCCCHHhHHH
Q 003836          756 IQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       756 l~~~p~~RPs~~evl~  771 (792)
                      |..||.+|+|+.|++.
T Consensus       390 L~fDP~~RiTl~EAL~  405 (415)
T KOG0671|consen  390 LEFDPARRITLREALS  405 (415)
T ss_pred             HccCccccccHHHHhc
Confidence            9999999999999987

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=6.3e-31  Score=269.04  Aligned_cols=252  Identities=27%  Similarity=0.382  Sum_probs=196.3

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccc--cccc-----chHHHHHHHHHhcccCCCCcccccceec-cCCceEE
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNS--VFQD-----SEKEFKAEVNGIGQTHHKNLVRLLGYCD-EGQNRLL  576 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~--~~~~-----~~~~~~~Ei~~l~~l~h~niv~l~g~~~-~~~~~~l  576 (792)
                      +...||+|+|+.|||+. +....+.||||+-.-  .-++     ..+...+|-++...|+||.||++++++. +.+..+-
T Consensus       467 lLhLLGrGGFSEVyKAF-Dl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCT  545 (775)
T KOG1151|consen  467 LLHLLGRGGFSEVYKAF-DLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCT  545 (775)
T ss_pred             HHHHhccccHHHHHHhc-ccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccccee
Confidence            44679999999999995 455668999998532  1111     1245678999999999999999999995 5567889


Q ss_pred             EEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC---CCCeEEeecCCCcccc
Q 003836          577 VYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD---HYNARISDFGLAKLLT  653 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~---~~~~kl~Dfg~a~~~~  653 (792)
                      |+||+++.+|+-||..++.++++....|++||+.||.||.+. .++|||-||||.||||.+   -|.+||.|||+++++.
T Consensus       546 VLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMd  624 (775)
T KOG1151|consen  546 VLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMD  624 (775)
T ss_pred             eeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecchhhhcc
Confidence            999999999999999999999999999999999999999987 578999999999999964   4789999999999987


Q ss_pred             CCCCCc------cccccccCCccccccccc----CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhh
Q 003836          654 LDQSHT------NTAIRGTKGYVAPEWFRN----MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRY  723 (792)
Q Consensus       654 ~~~~~~------~~~~~gt~~y~aPE~~~~----~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~  723 (792)
                      .+....      .....||..|++||.+.-    -.++.|.||||.|||+|+.+.|++||.......+  ++..      
T Consensus       625 ddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQd--ILqe------  696 (775)
T KOG1151|consen  625 DDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQD--ILQE------  696 (775)
T ss_pred             CCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHH--HHhh------
Confidence            654332      233569999999998853    3588999999999999999999999977644322  1100      


Q ss_pred             cccchhHhhhch-hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          724 QERTLEALVEND-LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       724 ~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                        .   .++... ......+..+.+...+|++||+..-++|....++..
T Consensus       697 --N---TIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~  740 (775)
T KOG1151|consen  697 --N---TILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC  740 (775)
T ss_pred             --h---chhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence              0   011111 111112345567788999999999999988877664

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.97  E-value=1.3e-30  Score=263.78  Aligned_cols=251  Identities=21%  Similarity=0.285  Sum_probs=201.7

Q ss_pred             hhhhcCccccceEEEeeecCC----CceEEEEEEccccccc-chHHHHHHHHHhcccCCCCcccccceeccC-CceEEEE
Q 003836          505 FKEELGRGAFGTVYKGFVNMG----SSNHVAVKKLNSVFQD-SEKEFKAEVNGIGQTHHKNLVRLLGYCDEG-QNRLLVY  578 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~----~~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~-~~~~lV~  578 (792)
                      .+..+-+|.||.||+|.+...    +.+.|-||.++....+ ....+..|.-.+..+.|||+..+.+++.++ ...+.+|
T Consensus       288 l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y  367 (563)
T KOG1024|consen  288 LSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLY  367 (563)
T ss_pred             chhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEE
Confidence            345789999999999976532    2356778877654333 345678888899999999999999998654 5678999


Q ss_pred             EeccCCCcccccc-----CC---CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCc
Q 003836          579 EFMSNGTVASFLF-----GD---SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK  650 (792)
Q Consensus       579 E~~~~gsL~~~l~-----~~---~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~  650 (792)
                      .++.-|+|..||.     +.   +.+...+...++.|++.|++|||..   ++||.||.++|.+||+...+||+|=.++|
T Consensus       368 ~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~LqVkltDsaLSR  444 (563)
T KOG1024|consen  368 PATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQLQVKLTDSALSR  444 (563)
T ss_pred             eccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---CcccchhhhhcceehhheeEEeccchhcc
Confidence            9999999999997     21   3456677888999999999999999   99999999999999999999999999998


Q ss_pred             cccCCCCCc-cccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccch
Q 003836          651 LLTLDQSHT-NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTL  728 (792)
Q Consensus       651 ~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  728 (792)
                      .+.+...+. ....-....||+||.+.+..|+.++|||||||+||||+| |+.|+.... .                ..+
T Consensus       445 DLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeID-P----------------fEm  507 (563)
T KOG1024|consen  445 DLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEID-P----------------FEM  507 (563)
T ss_pred             ccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccC-H----------------HHH
Confidence            765543322 222334668999999999999999999999999999998 566654321 1                223


Q ss_pred             hHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhcc
Q 003836          729 EALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEG  775 (792)
Q Consensus       729 ~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~  775 (792)
                      +..+....+-..+.+++.++..++..||...|++||+++|++.-|.+
T Consensus       508 ~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLse  554 (563)
T KOG1024|consen  508 EHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSE  554 (563)
T ss_pred             HHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHH
Confidence            44455555666677889999999999999999999999999998865

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.97  E-value=2.5e-30  Score=303.75  Aligned_cols=143  Identities=29%  Similarity=0.423  Sum_probs=128.0

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      .+.++||+|+||+||+|... ..++.||||++....   ......+.+|+.++..++|+||+++++++......+|||||
T Consensus         7 ~i~~~LG~G~fg~Vy~a~~~-~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy   85 (669)
T cd05610           7 VIVKPISRGAFGKVYLGRKK-NNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEY   85 (669)
T ss_pred             EEEEEEecCCCeEEEEEEEC-CCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeC
Confidence            34578999999999999754 456799999987532   22346788999999999999999999999999999999999


Q ss_pred             ccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCc
Q 003836          581 MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK  650 (792)
Q Consensus       581 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~  650 (792)
                      +++++|.+++.....+++..++.|+.||+.||+|||..   +|+||||||+||||+.++.+||+|||+++
T Consensus        86 ~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~  152 (669)
T cd05610          86 LIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK  152 (669)
T ss_pred             CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence            99999999998777788999999999999999999998   99999999999999999999999999986

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.97  E-value=5.4e-30  Score=263.88  Aligned_cols=237  Identities=26%  Similarity=0.348  Sum_probs=194.3

Q ss_pred             ccceEEEeeecCCCceEEEEEEcccccccc-hHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCCCcccccc
Q 003836          513 AFGTVYKGFVNMGSSNHVAVKKLNSVFQDS-EKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLF  591 (792)
Q Consensus       513 ~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~-~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~  591 (792)
                      +||.||+|+.. ++++.+++|++....... .+.+.+|++.+++++|+|++++++++......++++||+++++|.+++.
T Consensus         1 ~~g~v~~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~   79 (244)
T smart00220        1 SFGKVYLARDK-KTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLK   79 (244)
T ss_pred             CceEEEEEEEC-CCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHH
Confidence            57999999765 446789999998655444 6899999999999999999999999999999999999999999999997


Q ss_pred             CCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccccccccCCccc
Q 003836          592 GDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVA  671 (792)
Q Consensus       592 ~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~a  671 (792)
                      ....+++..+..++.+++++|.|||+.   +++|+||+|+||++++++.++|+|||.+.......  ......++..|++
T Consensus        80 ~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~  154 (244)
T smart00220       80 KRGRLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTPEYMA  154 (244)
T ss_pred             hccCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCcCCCC
Confidence            766688999999999999999999998   99999999999999999999999999998765432  2234457889999


Q ss_pred             ccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHH--HHHHHH
Q 003836          672 PEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVT--MLHRFV  749 (792)
Q Consensus       672 PE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~  749 (792)
                      ||.+....++.++||||||+++++|++|..|+........   ..             ..+...........  ...++.
T Consensus       155 pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~---~~-------------~~~~~~~~~~~~~~~~~~~~~~  218 (244)
T smart00220      155 PEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLE---LF-------------KKIGKPKPPFPPPEWKISPEAK  218 (244)
T ss_pred             HHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHH---HH-------------HHHhccCCCCccccccCCHHHH
Confidence            9999888899999999999999999999999865311100   00             00000000000111  456788


Q ss_pred             HHHHHccccCCCCCCCHHhHHH
Q 003836          750 MVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       750 ~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      +++.+|+..+|++||++.++++
T Consensus       219 ~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      219 DLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             HHHHHHccCCchhccCHHHHhh
Confidence            9999999999999999999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.97  E-value=8.7e-30  Score=284.21  Aligned_cols=266  Identities=21%  Similarity=0.237  Sum_probs=179.6

Q ss_pred             hhhhcCccccceEEEeeec---------------CCCceEEEEEEcccccccchHHH--------------HHHHHHhcc
Q 003836          505 FKEELGRGAFGTVYKGFVN---------------MGSSNHVAVKKLNSVFQDSEKEF--------------KAEVNGIGQ  555 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~---------------~~~~~~vavK~~~~~~~~~~~~~--------------~~Ei~~l~~  555 (792)
                      +.++||+|+||+||+|.+.               ...++.||||++........++|              ..|+.++.+
T Consensus       149 i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~l~~  228 (507)
T PLN03224        149 LRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYMCAK  228 (507)
T ss_pred             EeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHHHHH
Confidence            3478999999999999641               12345799999875433323333              346667777


Q ss_pred             cCCCCc-----ccccceecc--------CCceEEEEEeccCCCccccccCC------------------------CCCch
Q 003836          556 THHKNL-----VRLLGYCDE--------GQNRLLVYEFMSNGTVASFLFGD------------------------SKPNW  598 (792)
Q Consensus       556 l~h~ni-----v~l~g~~~~--------~~~~~lV~E~~~~gsL~~~l~~~------------------------~~l~~  598 (792)
                      ++|.++     ++++++|..        ....+|||||+++++|.++++..                        ..+++
T Consensus       229 l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~  308 (507)
T PLN03224        229 IKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDI  308 (507)
T ss_pred             hhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCH
Confidence            766654     677888753        35689999999999999988642                        12356


Q ss_pred             hHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccccccccCCcccccccccC
Q 003836          599 KLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM  678 (792)
Q Consensus       599 ~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  678 (792)
                      ..+..++.|++.||.|||+.   +|+||||||+|||++.++.+||+|||+++..............+++.|+|||.+...
T Consensus       309 ~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~  385 (507)
T PLN03224        309 NVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMP  385 (507)
T ss_pred             HHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCC
Confidence            67888999999999999998   999999999999999999999999999976543322222222357899999987532


Q ss_pred             C----------------------CCcccceehHHHHHHHHHhcCc-CCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          679 P----------------------ITVKVDVYSYGVLLLEIICLRR-NIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       679 ~----------------------~~~k~DV~S~Gv~l~el~tg~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                      .                      ...+.||||+||+++||+++.. |+...................+.     ......
T Consensus       386 ~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r-----~~~~~~  460 (507)
T PLN03224        386 QSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWR-----MYKGQK  460 (507)
T ss_pred             CCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHH-----hhcccC
Confidence            2                      1235799999999999999875 55432110000000000000000     000011


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCC---CCCCCHHhHHHHhccCcCCCCCCCCCCCCC
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDP---SHRPTMRKVTQMLEGVVEVPIPPCPWTLNI  790 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p---~~RPs~~evl~~L~~~~~~~~p~~P~~~~~  790 (792)
                      ..............+++.++|..+|   .+|+|++|+++            |||..++
T Consensus       461 ~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~------------Hp~f~~~  506 (507)
T PLN03224        461 YDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS------------HRFFLPE  506 (507)
T ss_pred             CCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC------------CCCcCCC
Confidence            1111112345677889999998766   78999999998            7777654

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.97  E-value=2.9e-30  Score=235.02  Aligned_cols=260  Identities=20%  Similarity=0.268  Sum_probs=195.5

Q ss_pred             hhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      .++||+|.||+|||++ +..+.+.||+|+++-..  +.......+|+-+++.++|+|||++++....++...||+|||..
T Consensus         7 mekigegtygtvfkar-n~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cdq   85 (292)
T KOG0662|consen    7 MEKIGEGTYGTVFKAR-NRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ   85 (292)
T ss_pred             HHhhcCCcceeeEecc-cCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhhH
Confidence            3689999999999996 44677899999986432  33346789999999999999999999999999999999999975


Q ss_pred             CCccccccC-CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          584 GTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       584 gsL~~~l~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                       +|..+... +..++......++.|+++||.+.|++   .+.|||+||.|.||+.+|+.|++|||+++.+..+-.... .
T Consensus        86 -dlkkyfdslng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgipvrcys-a  160 (292)
T KOG0662|consen   86 -DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYS-A  160 (292)
T ss_pred             -HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCceEeee-c
Confidence             77777654 35678888899999999999999999   999999999999999999999999999998765443332 2


Q ss_pred             ccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcc---cchhHhhhchhcc
Q 003836          663 IRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQE---RTLEALVENDLEA  738 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~  738 (792)
                      .+-|..|++|.++-+ +-|+...|+||-||++.|+....+|..+..+..++....-+......+   ..+..+.|...-+
T Consensus       161 evvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp  240 (292)
T KOG0662|consen  161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYP  240 (292)
T ss_pred             eeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccC
Confidence            345889999999876 458999999999999999998777765544332222111111111111   1122222222222


Q ss_pred             cCC---------HHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          739 MNN---------VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       739 ~~~---------~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .++         +.....-.++....+.-+|..|.++++.++
T Consensus       241 ~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq  282 (292)
T KOG0662|consen  241 IYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ  282 (292)
T ss_pred             CccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence            222         112233467778888899999999998877

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.96  E-value=1.6e-29  Score=289.59  Aligned_cols=258  Identities=19%  Similarity=0.212  Sum_probs=166.9

Q ss_pred             hhhhhcCccccceEEEeeecCC---CceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccce------eccCCce
Q 003836          504 GFKEELGRGAFGTVYKGFVNMG---SSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY------CDEGQNR  574 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~---~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~------~~~~~~~  574 (792)
                      .+.++||+|+||.||+|.+...   .+..||+|++.....  .+...+|  .+.+..+.+++.++..      +.++...
T Consensus       135 ~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (566)
T PLN03225        135 VLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSKKEDEY  210 (566)
T ss_pred             EEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccccCCce
Confidence            3457899999999999987532   156899998764321  1111111  1222223333333222      2456789


Q ss_pred             EEEEEeccCCCccccccCCCC--------------------CchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEE
Q 003836          575 LLVYEFMSNGTVASFLFGDSK--------------------PNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNIL  634 (792)
Q Consensus       575 ~lV~E~~~~gsL~~~l~~~~~--------------------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NIL  634 (792)
                      +|||||+++++|.+++.....                    .....+..++.||+.||+|||++   +|+||||||+|||
T Consensus       211 ~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLKP~NIL  287 (566)
T PLN03225        211 WLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVKPQNII  287 (566)
T ss_pred             EEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCCHHHEE
Confidence            999999999999988864321                    11234567999999999999998   9999999999999


Q ss_pred             EcC-CCCeEEeecCCCccccCCCCCccccccccCCcccccccccC----------------------CCCcccceehHHH
Q 003836          635 LDD-HYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM----------------------PITVKVDVYSYGV  691 (792)
Q Consensus       635 l~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~k~DV~S~Gv  691 (792)
                      +++ ++.+||+|||+++.+............+++.|+|||.+...                      .++.++|||||||
T Consensus       288 l~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGv  367 (566)
T PLN03225        288 FSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGL  367 (566)
T ss_pred             EeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHH
Confidence            996 58999999999987654444444556789999999965321                      2345679999999


Q ss_pred             HHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc----C--CHHHHHHHHHHHHHccccCCCCCCC
Q 003836          692 LLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM----N--NVTMLHRFVMVAFWCIQEDPSHRPT  765 (792)
Q Consensus       692 ~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~l~~l~~~Cl~~~p~~RPs  765 (792)
                      +||||+++..+++..........    .............+.+.....    .  .........+|+.+||+.||++|||
T Consensus       368 iL~el~~~~~~~~~~~~~~~~~l----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~t  443 (566)
T PLN03225        368 IFLQMAFPNLRSDSNLIQFNRQL----KRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRIS  443 (566)
T ss_pred             HHHHHHhCcCCCchHHHHHHHHH----HhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCC
Confidence            99999998776544321111000    000000000000011100000    0  0011234568999999999999999


Q ss_pred             HHhHHHH
Q 003836          766 MRKVTQM  772 (792)
Q Consensus       766 ~~evl~~  772 (792)
                      ++|+++.
T Consensus       444 a~e~L~H  450 (566)
T PLN03225        444 AKAALAH  450 (566)
T ss_pred             HHHHhCC
Confidence            9999983

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.1e-30  Score=271.78  Aligned_cols=261  Identities=22%  Similarity=0.249  Sum_probs=211.9

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccc---cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV---FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      ..||-|+||.|=+++.+... ..+|+|++++.   ....++.+..|-.+|...+.+.||+++..|.+.+..|++||-|-+
T Consensus       426 aTLGvGgFGRVELV~~~~~~-~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClG  504 (732)
T KOG0614|consen  426 ATLGVGGFGRVELVKVNSQK-ATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLG  504 (732)
T ss_pred             hhcccCccceEEEEEecccc-hHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcC
Confidence            46999999999998776432 25788887653   344566788999999999999999999999999999999999999


Q ss_pred             CCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccccc
Q 003836          584 GTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAI  663 (792)
Q Consensus       584 gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  663 (792)
                      |.|...|.++..++..+..-++..+.+|++|||.+   +||.|||||+|.|||.+|-+||.|||+|+....  ....-++
T Consensus       505 GElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~--g~KTwTF  579 (732)
T KOG0614|consen  505 GELWTILRDRGSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS--GRKTWTF  579 (732)
T ss_pred             chhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhcc--CCceeee
Confidence            99999999999999999999999999999999999   999999999999999999999999999998753  3344568


Q ss_pred             cccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHH
Q 003836          664 RGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVT  743 (792)
Q Consensus       664 ~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  743 (792)
                      +|||.|.|||++.++..+.++|.||||++++||++|.+||.........                ..++...-....|..
T Consensus       580 cGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktY----------------n~ILkGid~i~~Pr~  643 (732)
T KOG0614|consen  580 CGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTY----------------NLILKGIDKIEFPRR  643 (732)
T ss_pred             cCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHH----------------HHHHhhhhhhhcccc
Confidence            9999999999999999999999999999999999999999765332111                111111112223445


Q ss_pred             HHHHHHHHHHHccccCCCCCCC-----HHhHHHHh-------ccC--cCCCCCCCCCCCC
Q 003836          744 MLHRFVMVAFWCIQEDPSHRPT-----MRKVTQML-------EGV--VEVPIPPCPWTLN  789 (792)
Q Consensus       744 ~~~~l~~l~~~Cl~~~p~~RPs-----~~evl~~L-------~~~--~~~~~p~~P~~~~  789 (792)
                      ......++++.....+|.+|.-     +.+|.+.-       +++  ..+++|-.|...+
T Consensus       644 I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweglr~~~L~pPi~~~va~  703 (732)
T KOG0614|consen  644 ITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGLRSRTLPPPIIPSVAN  703 (732)
T ss_pred             cchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhhhhccCCCCccccCCC
Confidence            5667788999999999999975     66776552       332  3566666665543

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=2.8e-30  Score=247.23  Aligned_cols=262  Identities=19%  Similarity=0.316  Sum_probs=192.9

Q ss_pred             hhhcCccccceEEEeeecCCCceEEEEEEcccc--cccchHHHHHHHHHhcccCCCCcccccceeccC--------CceE
Q 003836          506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV--FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEG--------QNRL  575 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~--------~~~~  575 (792)
                      ..+||+|.||.||++... .+++.||+|++--.  ...--....+|+++|..++|+|++.++..|...        ...+
T Consensus        22 ~~kigqGtfgeVFkAr~~-n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~y  100 (376)
T KOG0669|consen   22 LAKIGQGTFGEVFKARSK-NTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFY  100 (376)
T ss_pred             HHhcCCchHHHHHHHhhc-CccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceee
Confidence            357999999999999754 44567888876431  122235678999999999999999999998532        3478


Q ss_pred             EEEEeccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccC
Q 003836          576 LVYEFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL  654 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~  654 (792)
                      |||.+|+. +|.-+|... .+++..++.+++.++..||.|+|..   .|+|||+||.|+||+.++.+||+|||+++.+..
T Consensus       101 lVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFGlar~fs~  176 (376)
T KOG0669|consen  101 LVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFGLARAFST  176 (376)
T ss_pred             eeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeeccccccceec
Confidence            99999987 788888665 5789999999999999999999998   999999999999999999999999999987654


Q ss_pred             CCCC---ccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH-------HHHhh
Q 003836          655 DQSH---TNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW-------AYDRY  723 (792)
Q Consensus       655 ~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~-------~~~~~  723 (792)
                      ....   ..+..+-|..|++||.+.+ .+++++.|||.-||++.||+|+...+...........+...       .|+..
T Consensus       177 ~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~  256 (376)
T KOG0669|consen  177 SKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNV  256 (376)
T ss_pred             ccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCc
Confidence            3321   2334556999999998875 67999999999999999999999888766544322222111       11111


Q ss_pred             cccchhHhhhch-h-ccc--CCHHH------HHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          724 QERTLEALVEND-L-EAM--NNVTM------LHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       724 ~~~~~~~~~~~~-~-~~~--~~~~~------~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .+-.+-+-+... + .+.  .-.+.      -++.++++..++..||.+||+.++++..
T Consensus       257 d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh  315 (376)
T KOG0669|consen  257 DNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH  315 (376)
T ss_pred             ccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence            111111111000 0 000  00111      2367889999999999999999998753

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.96  E-value=1.9e-29  Score=279.38  Aligned_cols=247  Identities=25%  Similarity=0.371  Sum_probs=202.2

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhccc-CCCCcccccceec-----cCCceEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT-HHKNLVRLLGYCD-----EGQNRLLV  577 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~-----~~~~~~lV  577 (792)
                      .|.++||.|.+|.||+++. ...++..|+|++... .+..++++.|.++++.. +|||++.++|++.     .++.++||
T Consensus        22 ei~evig~Gtygkv~k~k~-~~~~~~aa~kI~~~~-~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLV   99 (953)
T KOG0587|consen   22 EIIEVIGNGTYGKVYKGRH-VKTGQLAAIKIMDPT-EDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLV   99 (953)
T ss_pred             EEEEEEeeccceeEEEEee-eecCceeeeEeecCC-ccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEE
Confidence            4568899999999999964 445678899988754 55677889999999988 6999999999984     35679999


Q ss_pred             EEeccCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCC
Q 003836          578 YEFMSNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD  655 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~  655 (792)
                      ||||.+||.-+++.+-  .++.|..+..|+..+++||.+||..   .++|||||-.|||++.++.+||.|||++..+...
T Consensus       100 MEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT  176 (953)
T KOG0587|consen  100 MEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDST  176 (953)
T ss_pred             eeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEEeeeeeeeeeecc
Confidence            9999999999988653  5789999999999999999999998   9999999999999999999999999999887655


Q ss_pred             CCCccccccccCCccccccccc-----CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhH
Q 003836          656 QSHTNTAIRGTKGYVAPEWFRN-----MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEA  730 (792)
Q Consensus       656 ~~~~~~~~~gt~~y~aPE~~~~-----~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  730 (792)
                      .....+ ..||+.|||||++..     ..|+.++|+||||++..||--|..|+.++....-...+.              
T Consensus       177 ~grRnT-~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~Ip--------------  241 (953)
T KOG0587|consen  177 VGRRNT-FIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIP--------------  241 (953)
T ss_pred             cccccC-cCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCC--------------
Confidence            444433 459999999999954     357889999999999999999999986653321111000              


Q ss_pred             hhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          731 LVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       731 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                       ..+......+....+++.++|..||..|-+.||++.++++
T Consensus       242 -RNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~  281 (953)
T KOG0587|consen  242 -RNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK  281 (953)
T ss_pred             -CCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence             1122222335677899999999999999999999998876

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=1.3e-28  Score=244.15  Aligned_cols=245  Identities=22%  Similarity=0.292  Sum_probs=196.0

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEEEe
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      +..+||+|+|..|.++.+. .+.+.+|+|++++..   .+...-.+.|-.++... +||.+|.+..+|..+..+++|.||
T Consensus       254 ll~vigrgsyakvl~~~~~-~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffviey  332 (593)
T KOG0695|consen  254 LLRVIGRGSYAKVLLVRLK-KTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEY  332 (593)
T ss_pred             eeeeecCcchhhhhheehc-ccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEE
Confidence            3468999999999998765 456799999998642   22334567777777765 799999999999999999999999


Q ss_pred             ccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          581 MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       581 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +++|+|--++.+.++++++........|.-||.|||++   |||.||||..|+|||..|.+||.|||+.+....+ ....
T Consensus       333 v~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~l~~-gd~t  408 (593)
T KOG0695|consen  333 VNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGP-GDTT  408 (593)
T ss_pred             ecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcCCCC-Cccc
Confidence            99999999999989999999999999999999999999   9999999999999999999999999999875433 3445


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      .+.+|||.|.|||++++..|....|.|++||+++||+.|+.||+-...+..+..-.++...        .+++..++  .
T Consensus       409 stfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfq--------vilekqir--i  478 (593)
T KOG0695|consen  409 STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQ--------VILEKQIR--I  478 (593)
T ss_pred             ccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHH--------HHhhhccc--c
Confidence            6688999999999999999999999999999999999999999754322111111111111        12222222  2


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCC
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRP  764 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RP  764 (792)
                      +...+.+...+.+.-|+.||.+|.
T Consensus       479 prslsvkas~vlkgflnkdp~erl  502 (593)
T KOG0695|consen  479 PRSLSVKASHVLKGFLNKDPKERL  502 (593)
T ss_pred             cceeehhhHHHHHHhhcCCcHHhc
Confidence            334455667788888999999984

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=2.4e-29  Score=243.12  Aligned_cols=262  Identities=25%  Similarity=0.316  Sum_probs=197.6

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEccccccc--chHHHHHHHHHhcccCCCCcccccceeccC-----CceEEEEE
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLGYCDEG-----QNRLLVYE  579 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~--~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~-----~~~~lV~E  579 (792)
                      +.||-|+||.||..... .+++.||.|++......  ..+.+.+|+++|..++|.|++..++...-.     .+.|+|.|
T Consensus        59 RPIGYGAFGVVWsVTDP-RdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TE  137 (449)
T KOG0664|consen   59 RPIGYGAFGVVWSVTDP-RSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTE  137 (449)
T ss_pred             CcccccceeEEEeccCC-CCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHH
Confidence            46999999999998654 56789999998765432  357889999999999999999998876443     35788899


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      .|.. +|...+-....++...+.-+..||++||+|||+.   +|.||||||.|.|++.|...||+|||+++.-..++...
T Consensus       138 LmQS-DLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~h  213 (449)
T KOG0664|consen  138 LMQS-DLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLN  213 (449)
T ss_pred             HHHh-hhhheeccCCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccchhhhhh
Confidence            9976 8999998888899999999999999999999999   99999999999999999999999999999887777766


Q ss_pred             cccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH----HHHhh---cccchhHh
Q 003836          660 NTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW----AYDRY---QERTLEAL  731 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~----~~~~~---~~~~~~~~  731 (792)
                      .+..+-|..|+|||++++ ..|+.+.||||.||++.||+..+..|...........+.+.    ..+.+   -++...-+
T Consensus       214 MTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~  293 (449)
T KOG0664|consen  214 MTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHV  293 (449)
T ss_pred             hHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHh
Confidence            666677999999999987 46999999999999999999888777543322111111110    00000   00000001


Q ss_pred             hhchhcc---------cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHh
Q 003836          732 VENDLEA---------MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQML  773 (792)
Q Consensus       732 ~~~~~~~---------~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L  773 (792)
                      +....+.         ..+...-.+.+++..+++..+|++|.+..+.+..+
T Consensus       294 LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~  344 (449)
T KOG0664|consen  294 LRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR  344 (449)
T ss_pred             hccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence            1100000         00112234556777889999999999999988765

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.95  E-value=1.5e-28  Score=229.16  Aligned_cols=195  Identities=29%  Similarity=0.407  Sum_probs=164.0

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEEEeccCC
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYEFMSNG  584 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~E~~~~g  584 (792)
                      +.||+|++|.|-+-.+ ..++..+|+|++.... .+.+++..+|+.+..+. ..|.+|.++|........++.||.|.- 
T Consensus        52 ~elGrGayG~vekmrh-~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~t-  129 (282)
T KOG0984|consen   52 EELGRGAYGVVEKMRH-IQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDT-  129 (282)
T ss_pred             hhhcCCccchhhheee-ccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhh-
Confidence            5699999999977654 4567899999997543 45567888999987765 799999999999999999999999965 


Q ss_pred             Ccccccc----CCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          585 TVASFLF----GDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       585 sL~~~l~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      ||+.|..    .....++..+-+||..|.+||.|||++  ..+||||+||+||||+.+|++|++|||++-.+...  -..
T Consensus       130 Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS--iAk  205 (282)
T KOG0984|consen  130 SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYDGQVKICDFGISGYLVDS--IAK  205 (282)
T ss_pred             hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccCCcEEEcccccceeehhh--hHH
Confidence            7776653    456789999999999999999999998  79999999999999999999999999999776432  222


Q ss_pred             ccccccCCcccccccc----cCCCCcccceehHHHHHHHHHhcCcCCCcch
Q 003836          661 TAIRGTKGYVAPEWFR----NMPITVKVDVYSYGVLLLEIICLRRNIDNEI  707 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~----~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~  707 (792)
                      +.-.|-..|||||.+.    ...|+.|+||||||+.+.||.+++.|++.-.
T Consensus       206 t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~  256 (282)
T KOG0984|consen  206 TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWG  256 (282)
T ss_pred             HHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccC
Confidence            2244778999999885    3479999999999999999999999986543

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.95  E-value=9.5e-29  Score=272.66  Aligned_cols=238  Identities=27%  Similarity=0.348  Sum_probs=184.9

Q ss_pred             hhcCccccc-eEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEEEeccCC
Q 003836          507 EELGRGAFG-TVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYEFMSNG  584 (792)
Q Consensus       507 ~~lG~G~~g-~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~E~~~~g  584 (792)
                      +.+|.|..| .||+|..+   ++.||||++-.   +...-.++|+..|+.- +|||||++++.-.+...+||..|.|.- 
T Consensus       515 eilG~Gs~Gt~Vf~G~ye---~R~VAVKrll~---e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~-  587 (903)
T KOG1027|consen  515 EILGYGSNGTVVFRGVYE---GREVAVKRLLE---EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC-  587 (903)
T ss_pred             HHcccCCCCcEEEEEeeC---CceehHHHHhh---HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh-
Confidence            568999987 56999886   57999999853   3345678999999987 699999999999999999999999965 


Q ss_pred             CccccccCC-C---CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC-----CCCeEEeecCCCccccCC
Q 003836          585 TVASFLFGD-S---KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD-----HYNARISDFGLAKLLTLD  655 (792)
Q Consensus       585 sL~~~l~~~-~---~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~-----~~~~kl~Dfg~a~~~~~~  655 (792)
                      +|++++... .   ...-.....+..|++.||++||+.   +||||||||.||||+.     ...++|+|||+++.+..+
T Consensus       588 sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~  664 (903)
T KOG1027|consen  588 SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGG  664 (903)
T ss_pred             hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccccccCCC
Confidence            999999774 1   111134567889999999999997   9999999999999975     257999999999998776


Q ss_pred             CCCc--cccccccCCcccccccccCCCCcccceehHHHHHHHHHhc-CcCCCcchhhhhhhhHHHHHHHhhcccchhHhh
Q 003836          656 QSHT--NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICL-RRNIDNEISKVDKAILTDWAYDRYQERTLEALV  732 (792)
Q Consensus       656 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  732 (792)
                      ....  .....||-||+|||.+....-+.++||||+||++|+.++| ..||........  .+..      .+..+. . 
T Consensus       665 ~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~--NIl~------~~~~L~-~-  734 (903)
T KOG1027|consen  665 KSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA--NILT------GNYTLV-H-  734 (903)
T ss_pred             cchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh--hhhc------Ccccee-e-
Confidence            6543  3356799999999999998888899999999999999997 678865432111  0000      000000 0 


Q ss_pred             hchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          733 ENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       733 ~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                         +..  ..+.  +..+||.+|+.++|..||++.+|+.
T Consensus       735 ---L~~--~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~  766 (903)
T KOG1027|consen  735 ---LEP--LPDC--EAKDLISRMLNPDPQLRPSATDVLN  766 (903)
T ss_pred             ---ecc--CchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence               000  1111  7789999999999999999999985

>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity

Probab=99.95  E-value=8.5e-29  Score=220.86  Aligned_cols=102  Identities=38%  Similarity=0.617  Sum_probs=75.3

Q ss_pred             CCcEEEEecCCCCCC---CCeeEEEEeCccEEEEcCCCCEEEEe-ccCCCc--ceeEEEecCCcEEEEecCCcccccccc
Q 003836           72 SKTIVWYASAVNPAP---RGSKLRLTANRGLVLEDPEGREIWKS-EISTGQ--AAFGVLYDTGNFLIVNTNSERLWQSFD  145 (792)
Q Consensus        72 ~~tvvWvANr~~P~~---~~~~l~~~~~G~Lvl~~~~~~~vWst-~~~~~~--~~~a~LldsGNlVl~~~~~~~lWQSFd  145 (792)
                      ++||||+|||+.|+.   ....|.|+.||+|+|+|++++++|+| ++...+  ...|+|+|+|||||+|..+.+||||||
T Consensus         1 ~~tvvW~an~~~p~~~~s~~~~L~l~~dGnLvl~~~~~~~iWss~~t~~~~~~~~~~~L~~~GNlvl~d~~~~~lW~Sf~   80 (114)
T PF01453_consen    1 PRTVVWVANRNSPLTSSSGNYTLILQSDGNLVLYDSNGSVIWSSNNTSGRGNSGCYLVLQDDGNLVLYDSSGNVLWQSFD   80 (114)
T ss_dssp             ---------TTEEEEECETTEEEEEETTSEEEEEETTTEEEEE--S-TTSS-SSEEEEEETTSEEEEEETTSEEEEESTT
T ss_pred             CcccccccccccccccccccccceECCCCeEEEEcCCCCEEEEecccCCccccCeEEEEeCCCCEEEEeecceEEEeecC
Confidence            479999999999993   34789999999999999999999999 555444  689999999999999999999999999


Q ss_pred             CCcccccCCCccccc------eEEeeeccCCCCC
Q 003836          146 HPTDTLLPTQTMERG------GVVSSRRKDTYFS  173 (792)
Q Consensus       146 ~PtDtlLpg~~l~~~------~~L~S~~s~~~~s  173 (792)
                      |||||+||+|+|+.+      ..++||++.+|||
T Consensus        81 ~ptdt~L~~q~l~~~~~~~~~~~~~sw~s~~dps  114 (114)
T PF01453_consen   81 YPTDTLLPGQKLGDGNVTGKNDSLTSWSSNTDPS  114 (114)
T ss_dssp             SSS-EEEEEET--TSEEEEESTSSEEEESS----
T ss_pred             CCccEEEeccCcccCCCccccceEEeECCCCCCC
Confidence            999999999999873      2499999999986

Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.95  E-value=6.3e-28  Score=228.09  Aligned_cols=258  Identities=18%  Similarity=0.295  Sum_probs=194.7

Q ss_pred             HhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccC-CCCcccccceeccCC--ceEEEE
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH-HKNLVRLLGYCDEGQ--NRLLVY  578 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~g~~~~~~--~~~lV~  578 (792)
                      .+.+.+++|+|.++.||.|. +..+.+.++||+++..   ..+.+.+|+.+|+.|+ ||||++|++...+..  ...||+
T Consensus        39 dYeivrk~GRGKYSEVFeg~-~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiF  114 (338)
T KOG0668|consen   39 DYEIVRKVGRGKYSEVFEGI-NITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIF  114 (338)
T ss_pred             hHHHHHHHcCccHhhHhccc-ccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHh
Confidence            35567889999999999995 4455678999999754   4578999999999997 999999999997654  567999


Q ss_pred             EeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC-CCCeEEeecCCCccccCCCC
Q 003836          579 EFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD-HYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       579 E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~-~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      ||+.+.+...+.   ..++...+...+.++++||.|+|+.   ||+|||+||.|++||. ...++|+|+|+|....+...
T Consensus       115 E~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~e  188 (338)
T KOG0668|consen  115 EYVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE  188 (338)
T ss_pred             hhhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhhcCCCce
Confidence            999998777665   4567778888999999999999999   9999999999999995 46799999999998765544


Q ss_pred             CccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhH----------HHHHH--Hhhc
Q 003836          658 HTNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAIL----------TDWAY--DRYQ  724 (792)
Q Consensus       658 ~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~----------~~~~~--~~~~  724 (792)
                      ...  .+.+..|..||.+.. ..|+..-|+|||||+|.+|+-.+.||....+..++..-          ..+..  ....
T Consensus       189 YnV--RVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~L  266 (338)
T KOG0668|consen  189 YNV--RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDL  266 (338)
T ss_pred             eee--eeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCC
Confidence            332  235667899999876 46899999999999999999999999665443332110          00000  0011


Q ss_pred             ccchhHhhhchhc--------ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          725 ERTLEALVENDLE--------AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       725 ~~~~~~~~~~~~~--------~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      +.....++....+        .....-...+.++++...|.-|-.+|||++|.+.
T Consensus       267 dp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~  321 (338)
T KOG0668|consen  267 DPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA  321 (338)
T ss_pred             ChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence            1222222222111        1111123478899999999999999999999876

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.95  E-value=9.2e-28  Score=255.59  Aligned_cols=202  Identities=24%  Similarity=0.334  Sum_probs=173.3

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccc---cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ---DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      +.||-|+||.|-++. ..++...+|+|.+++.+.   ......+.|-.||+..+.+=||+|+-.|.+++.+|+||+|++|
T Consensus       635 k~iGvGAFGeV~Lv~-KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPG  713 (1034)
T KOG0608|consen  635 KTIGVGAFGEVCLVR-KVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPG  713 (1034)
T ss_pred             eeecccccceeEEEe-ecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCC
Confidence            459999999999985 345667899999987543   2334678899999999999999999999999999999999999


Q ss_pred             CCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC-------
Q 003836          584 GTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ-------  656 (792)
Q Consensus       584 gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~-------  656 (792)
                      |++-.+|.+...+.+.....++..+..|+++.|..   |+|||||||+|||||.+|.+||.|||++.-+.-..       
T Consensus       714 GDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~  790 (1034)
T KOG0608|consen  714 GDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQE  790 (1034)
T ss_pred             ccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccceeccccccccC
Confidence            99999999989999999888999999999999998   99999999999999999999999999986542100       


Q ss_pred             -C---------------------------------CccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcC
Q 003836          657 -S---------------------------------HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRN  702 (792)
Q Consensus       657 -~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p  702 (792)
                       .                                 ......+||+.|+|||++....++..+|.||.|||||||+-|+.|
T Consensus       791 gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~p  870 (1034)
T KOG0608|consen  791 GDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPP  870 (1034)
T ss_pred             CCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCC
Confidence             0                                 001224699999999999999999999999999999999999999


Q ss_pred             CCcchhhhhh
Q 003836          703 IDNEISKVDK  712 (792)
Q Consensus       703 ~~~~~~~~~~  712 (792)
                      |........+
T Consensus       871 f~~~tp~~tq  880 (1034)
T KOG0608|consen  871 FLADTPGETQ  880 (1034)
T ss_pred             ccCCCCCcce
Confidence            9776554433

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.94  E-value=1e-26  Score=233.51  Aligned_cols=211  Identities=34%  Similarity=0.528  Sum_probs=183.6

Q ss_pred             cCccccceEEEeeecCCCceEEEEEEccccccc-chHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCCCcc
Q 003836          509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD-SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVA  587 (792)
Q Consensus       509 lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~gsL~  587 (792)
                      ||+|.+|.||++.... +++.+++|++...... ..+.+.+|++.+++++|++++++++++......++++||+++++|.
T Consensus         1 l~~g~~~~v~~~~~~~-~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~   79 (215)
T cd00180           1 LGEGGFGTVYLARDKK-TGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLK   79 (215)
T ss_pred             CCcCCceEEEEEEecC-CCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHH
Confidence            6899999999997643 4678999998765332 3578999999999999999999999999999999999999999999


Q ss_pred             ccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC-CCCeEEeecCCCccccCCCCCccccccc
Q 003836          588 SFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD-HYNARISDFGLAKLLTLDQSHTNTAIRG  665 (792)
Q Consensus       588 ~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~g  665 (792)
                      +++... ..+++..+..++.+++++|.+||+.   +++|+||+|.||+++. ++.++|+|||.+........ ......+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~  155 (215)
T cd00180          80 DLLKENEGKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKTIVG  155 (215)
T ss_pred             HHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhcccC
Confidence            999765 5688999999999999999999999   9999999999999999 89999999999987644321 1223447


Q ss_pred             cCCcccccccccC-CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHH
Q 003836          666 TKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTM  744 (792)
Q Consensus       666 t~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  744 (792)
                      ...|++||.+... ..+.++|+|++|+++++|                                                
T Consensus       156 ~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------------  187 (215)
T cd00180         156 TPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------------  187 (215)
T ss_pred             CCCccChhHhcccCCCCchhhhHHHHHHHHHH------------------------------------------------
Confidence            8899999999887 888999999999999998                                                


Q ss_pred             HHHHHHHHHHccccCCCCCCCHHhHHHHh
Q 003836          745 LHRFVMVAFWCIQEDPSHRPTMRKVTQML  773 (792)
Q Consensus       745 ~~~l~~l~~~Cl~~~p~~RPs~~evl~~L  773 (792)
                       ..+.+++..|++.+|++||++.++++.+
T Consensus       188 -~~~~~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         188 -PELKDLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             -HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence             4567889999999999999999998743

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=6.1e-27  Score=243.86  Aligned_cols=141  Identities=28%  Similarity=0.408  Sum_probs=116.0

Q ss_pred             cccCHHHHHH-HHhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccC-----C---CCc
Q 003836          491 RCFTYKELVE-VTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH-----H---KNL  561 (792)
Q Consensus       491 ~~~~~~el~~-~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-----h---~ni  561 (792)
                      ......|... .+|...++||-|-|+|||++. +....+.||+|+.+.. +...+....||++|++++     |   ..|
T Consensus        67 HpV~IGD~F~~gRY~v~rKLGWGHFSTVWLaw-Dtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~V  144 (590)
T KOG1290|consen   67 HPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAW-DTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCV  144 (590)
T ss_pred             ceeeccccccCceEEEEEeccccccceeEEEe-eccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCcee
Confidence            3445566665 677778899999999999995 5566789999998754 344566788999999883     3   349


Q ss_pred             ccccceec----cCCceEEEEEeccCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEE
Q 003836          562 VRLLGYCD----EGQNRLLVYEFMSNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILL  635 (792)
Q Consensus       562 v~l~g~~~----~~~~~~lV~E~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl  635 (792)
                      |+|+++|.    .+.++++|+|++ |-+|..++...  +.++...+.+|+.||+.||.|||.+|  +|||.||||+|||+
T Consensus       145 V~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl  221 (590)
T KOG1290|consen  145 VQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL  221 (590)
T ss_pred             eeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence            99999995    456899999999 55788887653  67899999999999999999999997  99999999999999


Q ss_pred             c
Q 003836          636 D  636 (792)
Q Consensus       636 ~  636 (792)
                      -
T Consensus       222 ~  222 (590)
T KOG1290|consen  222 C  222 (590)
T ss_pred             e
Confidence            3

>cd00028 B_lectin Bulb-type mannose-specific lectin

Probab=99.94  E-value=1.1e-26  Score=209.56  Aligned_cols=108  Identities=31%  Similarity=0.538  Sum_probs=98.7

Q ss_pred             CceecCCCeEEEeeeecCCCCceEEEEEeecCCCCcEEEEecCCCCCCCCeeEEEEeCccEEEEcCCCCEEEEeccCC-C
Q 003836           39 EPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAVNPAPRGSKLRLTANRGLVLEDPEGREIWKSEIST-G  117 (792)
Q Consensus        39 ~~lvS~~g~F~lGF~~~~~~~~~~~gIW~~~~~~~tvvWvANr~~P~~~~~~l~~~~~G~Lvl~~~~~~~vWst~~~~-~  117 (792)
                      ++|+|++|.|++|||++.....++.+|||.+++ +++||+||++.|....+.|.|+.||+|+|.|.+|.++|+|++++ .
T Consensus         8 ~~l~s~~~~f~~G~~~~~~q~~dgnlv~~~~~~-~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~S~~~~~~   86 (116)
T cd00028           8 QTLVSSGSLFELGFFKLIMQSRDYNLILYKGSS-RTVVWVANRDNPSGSSCTLTLQSDGNLVIYDGSGTVVWSSNTTRVN   86 (116)
T ss_pred             CEEEeCCCcEEEecccCCCCCCeEEEEEEeCCC-CeEEEECCCCCCCCCCEEEEEecCCCeEEEcCCCcEEEEecccCCC
Confidence            478999999999999987654599999999887 89999999999977778999999999999999999999999876 5


Q ss_pred             cceeEEEecCCcEEEEecCCccccccccCC
Q 003836          118 QAAFGVLYDTGNFLIVNTNSERLWQSFDHP  147 (792)
Q Consensus       118 ~~~~a~LldsGNlVl~~~~~~~lWQSFd~P  147 (792)
                      +..+|+|+|+|||||++.++.+||||||||
T Consensus        87 ~~~~~~L~ddGnlvl~~~~~~~~W~Sf~~P  116 (116)
T cd00028          87 GNYVLVLLDDGNLVLYDSDGNFLWQSFDYP  116 (116)
T ss_pred             CceEEEEeCCCCEEEECCCCCEEEcCCCCC
Confidence            567899999999999999999999999999

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.94  E-value=3.7e-27  Score=234.13  Aligned_cols=255  Identities=23%  Similarity=0.232  Sum_probs=188.0

Q ss_pred             hcCccccceEEEeeecCCCceEEEEEEcccc--cccchHHHHHHHHHhcccCCCCcccccceecc------CCceEEEEE
Q 003836          508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV--FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDE------GQNRLLVYE  579 (792)
Q Consensus       508 ~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~------~~~~~lV~E  579 (792)
                      .+|.|.- .|--+ .+.-.+++||+|++...  .....++..+|+.++..++|+||++++.++.-      -.+.|+|||
T Consensus        24 p~~~g~~-~v~~a-~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e  101 (369)
T KOG0665|consen   24 PIGSGAQ-IVVAA-FDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVME  101 (369)
T ss_pred             ccCCCCc-eEEec-chhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHH
Confidence            4677776 44444 33445678999998654  23456788999999999999999999999843      346799999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      +|.. +|.+.+.  -.++-..+..|..|++.|++|||+.   +|+||||||+||++..+..+||.|||+|+....+  ..
T Consensus       102 ~m~~-nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~--~~  173 (369)
T KOG0665|consen  102 LMDA-NLCQVIL--MELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD--FM  173 (369)
T ss_pred             hhhh-HHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhhcccCcc--cc
Confidence            9965 8888776  4567788899999999999999999   9999999999999999999999999999865433  45


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhh---------------HHHHHHHhhc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAI---------------LTDWAYDRYQ  724 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~---------------~~~~~~~~~~  724 (792)
                      .+..+.|..|+|||++.+..+.+.+||||.||++.||++|+..|........-..               +......-..
T Consensus       174 mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~  253 (369)
T KOG0665|consen  174 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVE  253 (369)
T ss_pred             cCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhh
Confidence            5667789999999999998899999999999999999999988764322111000               0000000000


Q ss_pred             c------cchh-Hhhhchhc--ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          725 E------RTLE-ALVENDLE--AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       725 ~------~~~~-~~~~~~~~--~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .      .... -+-|....  .+.+......+.+++.+||-.+|++|.+++++++.
T Consensus       254 ~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H  310 (369)
T KOG0665|consen  254 NRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH  310 (369)
T ss_pred             cChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence            0      0000 00111110  11122345567889999999999999999999975

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.93  E-value=9.6e-26  Score=229.68  Aligned_cols=197  Identities=30%  Similarity=0.439  Sum_probs=172.5

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccccc-chHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD-SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      +.+.||+|++|+||++.... +++.+++|.+...... ..+.+.+|++.+++++|+|++++++++......++++||+++
T Consensus         3 ~~~~i~~g~~~~v~~~~~~~-~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~   81 (225)
T smart00221        3 LGKKLGEGAFGKVYLARDKG-TGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEG   81 (225)
T ss_pred             eeeEeecCCCeEEEEEEEcC-CCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCC
Confidence            45679999999999997653 4578999999865444 567899999999999999999999999999999999999999


Q ss_pred             CCccccccCCCC-CchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          584 GTVASFLFGDSK-PNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       584 gsL~~~l~~~~~-l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      ++|.+++..... +++..+..++.+++.+|.+||+.   +++|+||+|+||+++.++.++|+|||.+.............
T Consensus        82 ~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~  158 (225)
T smart00221       82 GDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKT  158 (225)
T ss_pred             CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccc
Confidence            999999987665 89999999999999999999998   99999999999999999999999999998775443112233


Q ss_pred             ccccCCccccccc-ccCCCCcccceehHHHHHHHHHhcCcCCCc
Q 003836          663 IRGTKGYVAPEWF-RNMPITVKVDVYSYGVLLLEIICLRRNIDN  705 (792)
Q Consensus       663 ~~gt~~y~aPE~~-~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~  705 (792)
                      ..++..|++||.+ ....++.++|||+||++++||++|+.||..
T Consensus       159 ~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      159 VKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             eeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence            4578889999998 667788899999999999999999999965

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.93  E-value=1.5e-26  Score=241.85  Aligned_cols=273  Identities=19%  Similarity=0.216  Sum_probs=205.2

Q ss_pred             ccccCHHHHHHHHhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccC------CCCccc
Q 003836          490 LRCFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH------HKNLVR  563 (792)
Q Consensus       490 ~~~~~~~el~~~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~------h~niv~  563 (792)
                      .-.+.+.|+....|......|+|-|++|-+|... ..++.||||++.+. +.-.+.=+.|+++|.+|+      ..+.++
T Consensus       421 YYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~-~r~~~vAiKIIRnN-E~M~KtGl~EleiLkKL~~AD~Edk~Hclr  498 (752)
T KOG0670|consen  421 YYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQ-ARGQEVAIKIIRNN-EVMHKTGLKELEILKKLNDADPEDKFHCLR  498 (752)
T ss_pred             eEEEehhhhhcceeEEEeccccceeeeeeecccc-CCCCeeEEEEeecc-hHHhhhhhHHHHHHHHhhccCchhhhHHHH
Confidence            3456788888888888888999999999999754 34569999999864 223355578999999984      467999


Q ss_pred             ccceeccCCceEEEEEeccCCCccccccCC---CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCC-
Q 003836          564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGD---SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY-  639 (792)
Q Consensus       564 l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~---~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~-  639 (792)
                      |+..|.+.++++||+|-+. .+|.++|..-   -.+....+..++.|+.-||..|..-   +|+|.||||.|||+++.. 
T Consensus       499 l~r~F~hknHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~  574 (752)
T KOG0670|consen  499 LFRHFKHKNHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKN  574 (752)
T ss_pred             HHHHhhhcceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcc
Confidence            9999999999999999874 4888988653   3578889999999999999999987   999999999999999764 


Q ss_pred             CeEEeecCCCccccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHH--
Q 003836          640 NARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTD--  717 (792)
Q Consensus       640 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~--  717 (792)
                      .+||||||.|......+   .+...-+.-|.|||++.+.+|+...|+||.||.||||.||+..|.........-+..+  
T Consensus       575 iLKLCDfGSA~~~~ene---itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~K  651 (752)
T KOG0670|consen  575 ILKLCDFGSASFASENE---ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELK  651 (752)
T ss_pred             eeeeccCcccccccccc---ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhc
Confidence            58999999997654332   2333446679999999999999999999999999999999988855322111000000  


Q ss_pred             ------------HHHHhhcc---------------------------cchhHhhhch-hcccCCHHHHHHHHHHHHHccc
Q 003836          718 ------------WAYDRYQE---------------------------RTLEALVEND-LEAMNNVTMLHRFVMVAFWCIQ  757 (792)
Q Consensus       718 ------------~~~~~~~~---------------------------~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~Cl~  757 (792)
                                  +...++..                           ..+...+... -.....+.....+.+|+..||.
T Consensus       652 Gk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~  731 (752)
T KOG0670|consen  652 GKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLI  731 (752)
T ss_pred             CCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhc
Confidence                        00000000                           0011111110 0112235567889999999999


Q ss_pred             cCCCCCCCHHhHHH
Q 003836          758 EDPSHRPTMRKVTQ  771 (792)
Q Consensus       758 ~~p~~RPs~~evl~  771 (792)
                      .||++|.|..+.++
T Consensus       732 LdP~KRit~nqAL~  745 (752)
T KOG0670|consen  732 LDPEKRITVNQALK  745 (752)
T ss_pred             cChhhcCCHHHHhc
Confidence            99999999999887

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.93  E-value=1.4e-26  Score=245.10  Aligned_cols=191  Identities=23%  Similarity=0.324  Sum_probs=165.3

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccc--------cchHHHHHHHHHhcccC---CCCcccccceeccCCceE
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ--------DSEKEFKAEVNGIGQTH---HKNLVRLLGYCDEGQNRL  575 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~--------~~~~~~~~Ei~~l~~l~---h~niv~l~g~~~~~~~~~  575 (792)
                      +.+|+|+||.|+++.++. ....|+||.+.+..-        .....+--||++|.+++   |+||++++++|++.+.+|
T Consensus       567 q~lG~GAyGkV~lai~K~-n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd~yy  645 (772)
T KOG1152|consen  567 QPLGEGAYGKVNLAIHKE-NNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDDYYY  645 (772)
T ss_pred             eeccccccceEEEeeecc-cceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCCeeE
Confidence            579999999999997654 467899998865321        11223557999999997   999999999999999999


Q ss_pred             EEEEec-cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccC
Q 003836          576 LVYEFM-SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL  654 (792)
Q Consensus       576 lV~E~~-~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~  654 (792)
                      |++|-. ++-+|.+++..+..+++.+..-|+.||+.|+++||++   +|||||||-+|+.++.+|-+||+|||.+.... 
T Consensus       646 l~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klidfgsaa~~k-  721 (772)
T KOG1152|consen  646 LETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLIDFGSAAYTK-  721 (772)
T ss_pred             EEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEeeccchhhhc-
Confidence            999965 4568899999999999999999999999999999999   99999999999999999999999999997654 


Q ss_pred             CCCCccccccccCCcccccccccCCCC-cccceehHHHHHHHHHhcCcCCC
Q 003836          655 DQSHTNTAIRGTKGYVAPEWFRNMPIT-VKVDVYSYGVLLLEIICLRRNID  704 (792)
Q Consensus       655 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~k~DV~S~Gv~l~el~tg~~p~~  704 (792)
                        +.+...++||..|.|||++.+.+|- ..-|||++|++||.++....|+.
T Consensus       722 --sgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  722 --SGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             --CCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence              3344567899999999999998875 55899999999999999888875

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.93  E-value=1.6e-26  Score=248.63  Aligned_cols=249  Identities=22%  Similarity=0.292  Sum_probs=202.0

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCC
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNG  584 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~g  584 (792)
                      +...+|.|.||.|||++. ..+++..|+|.++-...+..+-++.|+-+++..+|+|||.++|.+...+..++.|||+.+|
T Consensus        19 llqrvgsgTygdvyKaRd-~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycggg   97 (829)
T KOG0576|consen   19 LLQRVGSGTYGDVYKARD-KRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGG   97 (829)
T ss_pred             heeeecCCcccchhhhcc-cccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCC
Confidence            346799999999999964 4667899999998877777788899999999999999999999999999999999999999


Q ss_pred             CccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccccc
Q 003836          585 TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR  664 (792)
Q Consensus       585 sL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  664 (792)
                      +|++..+....+++.++....+...+||+|||+.   +=+|||||-.|||+++.+.+|++|||.+-.....-. ....+.
T Consensus        98 slQdiy~~TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqitati~-Krksfi  173 (829)
T KOG0576|consen   98 SLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITATIA-KRKSFI  173 (829)
T ss_pred             cccceeeecccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhhhhh-hhhccc
Confidence            9999999999999999999999999999999998   889999999999999999999999999865542211 223467


Q ss_pred             ccCCccccccc---ccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCC
Q 003836          665 GTKGYVAPEWF---RNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN  741 (792)
Q Consensus       665 gt~~y~aPE~~---~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  741 (792)
                      ||+.|||||+.   +.+.|..++|||+.|+...|+-..+.|....... ....+..           ....++ ......
T Consensus       174 GtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpm-r~l~LmT-----------kS~~qp-p~lkDk  240 (829)
T KOG0576|consen  174 GTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPM-RALFLMT-----------KSGFQP-PTLKDK  240 (829)
T ss_pred             CCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchH-HHHHHhh-----------ccCCCC-CcccCC
Confidence            99999999986   4678999999999999999998877775433211 0000000           000011 111123


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          742 VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       742 ~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ....+.+-++++.|+..+|.+||+++.+++
T Consensus       241 ~kws~~fh~fvK~altknpKkRptaeklL~  270 (829)
T KOG0576|consen  241 TKWSEFFHNFVKGALTKNPKKRPTAEKLLQ  270 (829)
T ss_pred             ccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence            456677889999999999999999987764

>smart00108 B_lectin Bulb-type mannose-specific lectin

Probab=99.93  E-value=2.9e-25  Score=199.73  Aligned_cols=106  Identities=34%  Similarity=0.551  Sum_probs=96.8

Q ss_pred             CceecCCCeEEEeeeecCCCCceEEEEEeecCCCCcEEEEecCCCCCCCCeeEEEEeCccEEEEcCCCCEEEEeccC-CC
Q 003836           39 EPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAVNPAPRGSKLRLTANRGLVLEDPEGREIWKSEIS-TG  117 (792)
Q Consensus        39 ~~lvS~~g~F~lGF~~~~~~~~~~~gIW~~~~~~~tvvWvANr~~P~~~~~~l~~~~~G~Lvl~~~~~~~vWst~~~-~~  117 (792)
                      ++|+|++|.|++|||.+... .++.+|||++.+ +++||+|||+.|+.+++.|.++.||+|+|.|.+|.+||+|++. +.
T Consensus         8 ~~l~s~~~~f~~G~~~~~~q-~dgnlV~~~~~~-~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~S~t~~~~   85 (114)
T smart00108        8 QTLVSGNSLFELGFFTLIMQ-NDYNLILYKSSS-RTVVWVANRDNPVSDSCTLTLQSDGNLVLYDGDGRVVWSSNTTGAN   85 (114)
T ss_pred             CEEecCCCcEeeeccccCCC-CCEEEEEEECCC-CcEEEECCCCCCCCCCEEEEEeCCCCEEEEeCCCCEEEEecccCCC
Confidence            47899999999999998655 589999999887 8999999999999777899999999999999999999999987 45


Q ss_pred             cceeEEEecCCcEEEEecCCccccccccC
Q 003836          118 QAAFGVLYDTGNFLIVNTNSERLWQSFDH  146 (792)
Q Consensus       118 ~~~~a~LldsGNlVl~~~~~~~lWQSFd~  146 (792)
                      +..+|+|+|+|||||++..+.+|||||||
T Consensus        86 ~~~~~~L~ddGnlvl~~~~~~~~W~Sf~~  114 (114)
T smart00108       86 GNYVLVLLDDGNLVIYDSDGNFLWQSFDY  114 (114)
T ss_pred             CceEEEEeCCCCEEEECCCCCEEeCCCCC
Confidence            56789999999999999999999999997

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.92  E-value=9.2e-26  Score=232.72  Aligned_cols=258  Identities=22%  Similarity=0.291  Sum_probs=191.2

Q ss_pred             hhhcCccccceEEEeeecCC--CceEEEEEEcccccccchHHHHHHHHHhcccC-CCCcccccceeccCCceEEEEEecc
Q 003836          506 KEELGRGAFGTVYKGFVNMG--SSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH-HKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~--~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      .++||+|.|++||++++...  ..+.||+|.+...  .....+.+|++.|.++. +.||+++.+++...+.+.+|+||++
T Consensus        41 v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t--s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~  118 (418)
T KOG1167|consen   41 VNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT--SSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFE  118 (418)
T ss_pred             hccccccchhhhhhhhHhhhccccceEeeeecccc--cCchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecccC
Confidence            46899999999999987652  5678999998764  34567999999999995 9999999999999999999999999


Q ss_pred             CCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC-CCCeEEeecCCCccccCCC-----
Q 003836          583 NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD-HYNARISDFGLAKLLTLDQ-----  656 (792)
Q Consensus       583 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~-~~~~kl~Dfg~a~~~~~~~-----  656 (792)
                      .....+++..   ++...+...+..+++||+++|..   |||||||||+|+|.+. .+.-.|.|||+|.......     
T Consensus       119 H~~f~~l~~~---l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s  192 (418)
T KOG1167|consen  119 HDRFRDLYRS---LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHS  192 (418)
T ss_pred             ccCHHHHHhc---CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEechhHHHHHhhhhhhhh
Confidence            9888888744   67889999999999999999999   9999999999999984 5778999999997221000     


Q ss_pred             --------CC------------------------------ccccccccCCccccccccc-CCCCcccceehHHHHHHHHH
Q 003836          657 --------SH------------------------------TNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEII  697 (792)
Q Consensus       657 --------~~------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~  697 (792)
                              ..                              ......||+||+|||++.. ..-++++||||-|||++.++
T Consensus       193 ~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lsll  272 (418)
T KOG1167|consen  193 RSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLL  272 (418)
T ss_pred             hhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhh
Confidence                    00                              0012359999999999865 56789999999999999999


Q ss_pred             hcCcCCCcchhhhhh----hhHHHH------HHH--h--hcc-c---chh-------Hh-hhchhccc--------CCHH
Q 003836          698 CLRRNIDNEISKVDK----AILTDW------AYD--R--YQE-R---TLE-------AL-VENDLEAM--------NNVT  743 (792)
Q Consensus       698 tg~~p~~~~~~~~~~----~~~~~~------~~~--~--~~~-~---~~~-------~~-~~~~~~~~--------~~~~  743 (792)
                      +++.||.....+.+.    ..+..+      +..  .  ..+ .   .+.       .+ ........        ....
T Consensus       273 s~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~  352 (418)
T KOG1167|consen  273 SRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDV  352 (418)
T ss_pred             ccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeecccccc
Confidence            999999654333221    110000      000  0  000 0   000       00 00000000        0112


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          744 MLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       744 ~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .+..++++..+|+..||.+|.|+++.++
T Consensus       353 ~~~~~~dlLdk~le~np~kRitAEeALk  380 (418)
T KOG1167|consen  353 FPALLLDLLDKCLELNPQKRITAEDALK  380 (418)
T ss_pred             ccHHHHHHHHHHccCChhhcccHHHHhc
Confidence            3457899999999999999999999986

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.91  E-value=2.2e-25  Score=268.55  Aligned_cols=196  Identities=15%  Similarity=0.221  Sum_probs=140.9

Q ss_pred             cccCC-CCccccccee-------ccCCceEEEEEeccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeE
Q 003836          554 GQTHH-KNLVRLLGYC-------DEGQNRLLVYEFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQII  624 (792)
Q Consensus       554 ~~l~h-~niv~l~g~~-------~~~~~~~lV~E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iv  624 (792)
                      ++++| .||++++++|       .+....++++|++ +++|.++|... ..+++.+++.++.||++||+|||++   +|+
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---gIv  102 (793)
T PLN00181         27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQ---GIV  102 (793)
T ss_pred             chhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence            34556 6888899988       3334567888988 55999999754 5689999999999999999999998   999


Q ss_pred             ecCCCCCcEEEcC-------------------CCCeEEeecCCCccccCCCC---------------CccccccccCCcc
Q 003836          625 HCDIKPQNILLDD-------------------HYNARISDFGLAKLLTLDQS---------------HTNTAIRGTKGYV  670 (792)
Q Consensus       625 H~dikp~NILl~~-------------------~~~~kl~Dfg~a~~~~~~~~---------------~~~~~~~gt~~y~  670 (792)
                      ||||||+||||+.                   ++.+||+|||+++.......               .......||+.||
T Consensus       103 HrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~  182 (793)
T PLN00181        103 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYT  182 (793)
T ss_pred             eccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceE
Confidence            9999999999954                   44566666666654211000               0001135788899


Q ss_pred             cccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHH
Q 003836          671 APEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVM  750 (792)
Q Consensus       671 aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  750 (792)
                      |||++.+..++.++|||||||+||||++|..|+......     .......         ...+     .......+..+
T Consensus       183 APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~-----~~~~~~~---------~~~~-----~~~~~~~~~~~  243 (793)
T PLN00181        183 SPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRT-----MSSLRHR---------VLPP-----QILLNWPKEAS  243 (793)
T ss_pred             ChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHH-----HHHHHHh---------hcCh-----hhhhcCHHHHH
Confidence            999999999999999999999999999988876432111     0000000         0000     00112334567


Q ss_pred             HHHHccccCCCCCCCHHhHHHH
Q 003836          751 VAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       751 l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ++.+||+.+|.+||+|.||++.
T Consensus       244 ~~~~~L~~~P~~Rps~~eil~h  265 (793)
T PLN00181        244 FCLWLLHPEPSCRPSMSELLQS  265 (793)
T ss_pred             HHHHhCCCChhhCcChHHHhhc
Confidence            8889999999999999999873

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.91  E-value=5.1e-24  Score=206.67  Aligned_cols=260  Identities=16%  Similarity=0.288  Sum_probs=186.7

Q ss_pred             CccccCHHHHHHHHhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhccc-CCCCcccccce
Q 003836          489 NLRCFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT-HHKNLVRLLGY  567 (792)
Q Consensus       489 ~~~~~~~~el~~~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~g~  567 (792)
                      ++...++.|.    +++.+.||+|.||.+-++.+. ++...+++|.+... ....++|.+|..---.| .|.||+.-++.
T Consensus        16 el~kv~l~d~----y~I~k~lgeG~FgkIlL~eHr-~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~v   89 (378)
T KOG1345|consen   16 ELKKVDLEDV----YTINKQLGEGRFGKILLAEHR-QSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEV   89 (378)
T ss_pred             cccccchhhh----hhHHHHhcccceeeEEeeecc-CCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHH
Confidence            3444455443    445678999999999999754 66788999998775 34568899998744444 69999988765


Q ss_pred             -eccCCceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEc--CCCCeEEe
Q 003836          568 -CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLD--DHYNARIS  644 (792)
Q Consensus       568 -~~~~~~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~--~~~~~kl~  644 (792)
                       |...+.+++++||+|.|+|.+-+.. ..+.+..-.+++.|++.||.|+|++   .+||||||.+||||=  +..++||+
T Consensus        90 aFqt~d~YvF~qE~aP~gdL~snv~~-~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlc  165 (378)
T KOG1345|consen   90 AFQTSDAYVFVQEFAPRGDLRSNVEA-AGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLC  165 (378)
T ss_pred             HhhcCceEEEeeccCccchhhhhcCc-ccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEee
Confidence             5666778899999999999998855 4466777889999999999999999   999999999999993  44589999


Q ss_pred             ecCCCccccCCCCCccccccccCCccccccccc-----CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHH
Q 003836          645 DFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN-----MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWA  719 (792)
Q Consensus       645 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~  719 (792)
                      |||+.+.....    .....-+..|.+||....     ....+.+|||.||++++.++||..|+.......    -..|.
T Consensus       166 DFG~t~k~g~t----V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d----~~Y~~  237 (378)
T KOG1345|consen  166 DFGLTRKVGTT----VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMD----KPYWE  237 (378)
T ss_pred             ecccccccCce----ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccC----chHHH
Confidence            99998754321    111223567999998743     245688999999999999999999997433221    11233


Q ss_pred             HHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          720 YDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      +..|..+....+.+.      -...++++.++-++-|..+|++|=-+.++.++
T Consensus       238 ~~~w~~rk~~~~P~~------F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~  284 (378)
T KOG1345|consen  238 WEQWLKRKNPALPKK------FNPFSEKALRLFKKSLTPRFKDRCKIWTAKKM  284 (378)
T ss_pred             HHHHhcccCccCchh------hcccCHHHHHHHHHhcCCcccccchhHHHHHH
Confidence            444444333221111      11234566667777888888888555555544

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.90  E-value=1.1e-24  Score=210.81  Aligned_cols=248  Identities=20%  Similarity=0.342  Sum_probs=194.0

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccc--ccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNS--VFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~--~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      ++..+|.+.-.|..|+|+++.   ..+++|++.-  ......++|.+|.-.|+.+.||||+.++|.|....+..++..||
T Consensus       193 nl~tkl~e~hsgelwrgrwqg---ndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~m  269 (448)
T KOG0195|consen  193 NLITKLAESHSGELWRGRWQG---NDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYM  269 (448)
T ss_pred             hhhhhhccCCCcccccccccC---cchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeec
Confidence            355678899999999999863   4577777653  33344578999999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCC--CchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          582 SNGTVASFLFGDSK--PNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       582 ~~gsL~~~l~~~~~--l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      +.|||...|++...  .+..+..+++.+||+|++|||+.- +-|..--|....++||++.+++|+- +-++.     +..
T Consensus       270 p~gslynvlhe~t~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarism-ad~kf-----sfq  342 (448)
T KOG0195|consen  270 PFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISM-ADTKF-----SFQ  342 (448)
T ss_pred             cchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheec-cccee-----eee
Confidence            99999999998753  577899999999999999999972 2244456889999999999998862 11111     111


Q ss_pred             cccccccCCcccccccccCCCC---cccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          660 NTAIRGTKGYVAPEWFRNMPIT---VKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~---~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                      .....-.|.||+||.++..+-+   .++|+|||.++||||.|...||......+-                -..+.-+.+
T Consensus       343 e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmec----------------gmkialegl  406 (448)
T KOG0195|consen  343 EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMEC----------------GMKIALEGL  406 (448)
T ss_pred             ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhh----------------hhhhhhccc
Confidence            1112236789999999877644   579999999999999999999965432211                112223455


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      +...++..+..+.+++.-|++.||.+||.+..|+-+||+++
T Consensus       407 rv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  407 RVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI  447 (448)
T ss_pred             cccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence            56677778888899999999999999999999999999874

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.90  E-value=5.7e-24  Score=208.46  Aligned_cols=165  Identities=21%  Similarity=0.173  Sum_probs=125.3

Q ss_pred             CCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          584 GTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       584 gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      |+|.+++... ..+++..+..|+.||++||.|||++   +      ||+|||++.++.+|+  ||+++......      
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~------   63 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ------   63 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc------
Confidence            6889999764 5689999999999999999999998   4      999999999999999  99998754322      


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc-cCC
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA-MNN  741 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  741 (792)
                      ..||+.|+|||++.+..++.++|||||||++|||++|+.||........  .+...... ...        ..... ...
T Consensus        64 ~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~--~~~~~~~~-~~~--------~~~~~~~~~  132 (176)
T smart00750       64 SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSA--ILEILLNG-MPA--------DDPRDRSNL  132 (176)
T ss_pred             CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcH--HHHHHHHH-hcc--------CCccccccH
Confidence            2588999999999999999999999999999999999999865432111  01000000 000        00000 011


Q ss_pred             HHHHH--HHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          742 VTMLH--RFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       742 ~~~~~--~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                      .....  ++.+++.+||+.+|.+||++.|+++.+..+
T Consensus       133 ~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750      133 ESVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             HHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence            12222  689999999999999999999999987543

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.88  E-value=2.2e-22  Score=215.60  Aligned_cols=172  Identities=19%  Similarity=0.132  Sum_probs=130.6

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccc-----cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-----FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLV  577 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~-----~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV  577 (792)
                      +.+.+.||+|+||+||+|.....+++.+|||++...     .....+.+.+|++++++++|+|+++.+..   ....+||
T Consensus        20 Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---~~~~~LV   96 (365)
T PRK09188         20 FVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---TGKDGLV   96 (365)
T ss_pred             ceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE---cCCcEEE
Confidence            445678999999999999866545667899987532     12235679999999999999999853322   2457999


Q ss_pred             EEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCC-CCCcEEEcCCCCeEEeecCCCccccCCC
Q 003836          578 YEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDI-KPQNILLDDHYNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~di-kp~NILl~~~~~~kl~Dfg~a~~~~~~~  656 (792)
                      |||+++++|... ...      ....++.|+++||.|||+.   +|+|||| ||+|||++.++.+||+|||+++.+....
T Consensus        97 mE~~~G~~L~~~-~~~------~~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~  166 (365)
T PRK09188         97 RGWTEGVPLHLA-RPH------GDPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRG  166 (365)
T ss_pred             EEccCCCCHHHh-Ccc------chHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECccceecccCc
Confidence            999999999632 111      1246788999999999998   9999999 9999999999999999999999775433


Q ss_pred             CC-------ccccccccCCcccccccccCC------CCccccee
Q 003836          657 SH-------TNTAIRGTKGYVAPEWFRNMP------ITVKVDVY  687 (792)
Q Consensus       657 ~~-------~~~~~~gt~~y~aPE~~~~~~------~~~k~DV~  687 (792)
                      ..       ..+...+++.|+|||.+...+      .+..+|-|
T Consensus       167 ~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW  210 (365)
T PRK09188        167 ALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW  210 (365)
T ss_pred             chhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence            21       113556888999999986432      33346666

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.85  E-value=1.1e-20  Score=203.42  Aligned_cols=257  Identities=19%  Similarity=0.210  Sum_probs=189.2

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCC----CCccccccee-ccCCceEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHH----KNLVRLLGYC-DEGQNRLLV  577 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h----~niv~l~g~~-~~~~~~~lV  577 (792)
                      +.+.++||+|+||.||++.........+|+|............+..|+.++..+.+    +++..+++.. ..+...++|
T Consensus        20 ~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iV   99 (322)
T KOG1164|consen   20 YKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIV   99 (322)
T ss_pred             eEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEE
Confidence            44567899999999999975443345788887765433333378888888888863    6888888888 477788999


Q ss_pred             EEeccCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC-----CCeEEeecCCCc
Q 003836          578 YEFMSNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH-----YNARISDFGLAK  650 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~-----~~~kl~Dfg~a~  650 (792)
                      |+.. +.+|.++....  +.++..+.++|+.|++.+|.+||+.   |++||||||.|+++...     ..+.|.|||+++
T Consensus       100 M~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar  175 (322)
T KOG1164|consen  100 MSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR  175 (322)
T ss_pred             Eecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence            9987 66999977443  5789999999999999999999999   99999999999999854     469999999999


Q ss_pred             --cccCCCCC------c-cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHH
Q 003836          651 --LLTLDQSH------T-NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYD  721 (792)
Q Consensus       651 --~~~~~~~~------~-~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~  721 (792)
                        ........      . ....+||..|.++....+.+.+++.|+||++.++.|++.|..|+...........+......
T Consensus       176 ~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~  255 (322)
T KOG1164|consen  176 RFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRK  255 (322)
T ss_pred             cccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhh
Confidence              43222211      1 22356999999999999999999999999999999999999998654332221111111111


Q ss_pred             hhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          722 RYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       722 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                      .        ....     ........+.++...+-..+..++|....+...|+..
T Consensus       256 ~--------~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~  297 (322)
T KOG1164|consen  256 L--------LTDR-----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDV  297 (322)
T ss_pred             h--------cccc-----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHH
Confidence            0        0000     1111233445555556668999999999999887654

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.82  E-value=1.3e-19  Score=195.08  Aligned_cols=256  Identities=26%  Similarity=0.341  Sum_probs=194.5

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccccc---chHHHHHHHHHhcccCCC-CcccccceeccCCceEEEEEe
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD---SEKEFKAEVNGIGQTHHK-NLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~---~~~~~~~Ei~~l~~l~h~-niv~l~g~~~~~~~~~lV~E~  580 (792)
                      ..+.||.|+|+.||++...    ..+++|.+......   ....+.+|+.+++.+.|+ +++++.+++......++++|+
T Consensus         4 ~~~~l~~g~~~~v~~~~~~----~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~   79 (384)
T COG0515           4 ILRKLGEGSFGEVYLARDR----KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY   79 (384)
T ss_pred             eEEeecCCCCeEEEEEEec----cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence            3467999999999999765    57899998765443   367899999999999988 799999999777778999999


Q ss_pred             ccCCCccccccCCC---CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCC-CeEEeecCCCccccCCC
Q 003836          581 MSNGTVASFLFGDS---KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY-NARISDFGLAKLLTLDQ  656 (792)
Q Consensus       581 ~~~gsL~~~l~~~~---~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~-~~kl~Dfg~a~~~~~~~  656 (792)
                      +.++++.+++....   .+.......++.|++.++.|+|+.   +++||||||+||+++..+ .+++.|||.++......
T Consensus        80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~  156 (384)
T COG0515          80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG  156 (384)
T ss_pred             CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence            99999997776654   688999999999999999999999   899999999999999998 79999999998665443


Q ss_pred             CC-----ccccccccCCccccccccc---CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccch
Q 003836          657 SH-----TNTAIRGTKGYVAPEWFRN---MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTL  728 (792)
Q Consensus       657 ~~-----~~~~~~gt~~y~aPE~~~~---~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  728 (792)
                      ..     ......|+..|+|||.+..   ...+...|+||+|++++++++|..|+......................   
T Consensus       157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~---  233 (384)
T COG0515         157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP---  233 (384)
T ss_pred             ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc---
Confidence            32     2355679999999999987   578899999999999999999999965443210000000000000000   


Q ss_pred             hHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          729 EALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       729 ~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                        .................+.+++..++..+|.+|.++.+....
T Consensus       234 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         234 --SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             --ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence              000000000002223567888999999999999999887764

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.82  E-value=4.1e-21  Score=219.44  Aligned_cols=252  Identities=20%  Similarity=0.254  Sum_probs=186.0

Q ss_pred             hhhcCccccceEEEeeecCCCceEEEEEEcccc--cccc----hHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV--FQDS----EKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~--~~~~----~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      ...+|.|++|.|+....... .+..+.|.....  ....    ...+..|.-+-..++|+|++..+..+.+.....-+||
T Consensus       323 ~~~~g~ga~g~~~~~~~~~~-~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE  401 (601)
T KOG0590|consen  323 GRVLGSGAYGSVRIAKRRSD-LKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME  401 (601)
T ss_pred             cceeeecccCceEEEEecCC-CccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence            35799999997766543322 122333322100  1111    1225567777788999999999998888887777799


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC--
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS--  657 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~--  657 (792)
                      |+++ +|..++.+...+....+..++.|+..|+.|+|+.   +|.|||||++|++++.++.+||+|||.+..+..+..  
T Consensus       402 ~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~  477 (601)
T KOG0590|consen  402 YCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKN  477 (601)
T ss_pred             cccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccCcchh
Confidence            9999 9999998877888899999999999999999999   999999999999999999999999999988765443  


Q ss_pred             -CccccccccCCcccccccccCCCCcc-cceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          658 -HTNTAIRGTKGYVAPEWFRNMPITVK-VDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       658 -~~~~~~~gt~~y~aPE~~~~~~~~~k-~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                       .....++|+.+|+|||.+...+|++. .||||.|+++..|++|+.||...........     .......    .-...
T Consensus       478 ~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~-----~~~~~~~----~~~~~  548 (601)
T KOG0590|consen  478 IHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFK-----TNNYSDQ----RNIFE  548 (601)
T ss_pred             hhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchh-----hhccccc----ccccc
Confidence             34556789999999999999999864 8999999999999999999865432211100     0000000    00000


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      -........+.+...++.++|+.+|.+|.|+++|++
T Consensus       549 ~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  549 GPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN  584 (601)
T ss_pred             ChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence            000011234567788999999999999999999997

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.80  E-value=1.4e-19  Score=173.14  Aligned_cols=201  Identities=20%  Similarity=0.255  Sum_probs=166.7

Q ss_pred             HHHhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCC-CCcccccceeccCCceEEEE
Q 003836          500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHH-KNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       500 ~~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h-~niv~l~g~~~~~~~~~lV~  578 (792)
                      ...+.+.++||.|+||.+|.|. ...+++.||+|.-+..  ....++..|.++++.++| ..|..+..+..+...-.|||
T Consensus        14 ~gky~lvrkiGsGSFGdIy~~~-~i~~ge~VAiK~Es~~--a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM   90 (341)
T KOG1163|consen   14 GGKYKLVRKIGSGSFGDIYLGI-SITSGEEVAIKLESSK--AKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM   90 (341)
T ss_pred             ccceEEEEeecCCchhheeeee-eccCCceEEEEeeccc--CCCcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence            3345667899999999999995 4567889999986553  334567889999999975 77888888889999999999


Q ss_pred             EeccCCCcccccc-CCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC---CCeEEeecCCCccccC
Q 003836          579 EFMSNGTVASFLF-GDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH---YNARISDFGLAKLLTL  654 (792)
Q Consensus       579 E~~~~gsL~~~l~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~---~~~kl~Dfg~a~~~~~  654 (792)
                      +.. +-||.+++. -.+.++.++.+-++-|++.-++|+|.+   ++|||||||+|+|..-+   ..+.++|||+|+.+..
T Consensus        91 dLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d  166 (341)
T KOG1163|consen   91 DLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD  166 (341)
T ss_pred             ecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchhhhcc
Confidence            998 568888774 346788899999999999999999999   99999999999999744   4689999999998765


Q ss_pred             CCCC------ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcch
Q 003836          655 DQSH------TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEI  707 (792)
Q Consensus       655 ~~~~------~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~  707 (792)
                      ....      ..+...||.+|.+--...+.+.+.+.|+=|+|.+|..+--|..||....
T Consensus       167 ~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglk  225 (341)
T KOG1163|consen  167 IRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLK  225 (341)
T ss_pred             ccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccc
Confidence            4332      2334569999998888888888999999999999999999999997654

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.80  E-value=2e-19  Score=177.48  Aligned_cols=138  Identities=15%  Similarity=0.142  Sum_probs=108.2

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEccccccc--c-------h-----------------HHHHHHHHHhcccCCCC
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--S-------E-----------------KEFKAEVNGIGQTHHKN  560 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~--~-------~-----------------~~~~~Ei~~l~~l~h~n  560 (792)
                      ..||+|++|.||+|...  +++.||||+++.....  .       .                 ....+|++.+.++.|++
T Consensus         3 ~~ig~G~~~~Vy~a~~~--~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05147           3 GCISTGKEANVYHATTA--NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG   80 (190)
T ss_pred             CccccccceEEEEEECC--CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence            57999999999999764  5789999998753211  0       1                 12245999999998887


Q ss_pred             cccccceeccCCceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHH-hhccCCCeEecCCCCCcEEEcCCC
Q 003836          561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYL-HEECCTQIIHCDIKPQNILLDDHY  639 (792)
Q Consensus       561 iv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivH~dikp~NILl~~~~  639 (792)
                      +.....+..  ...+|||||++++++.........++.....+++.|++.+|.|+ |+.   +|+||||||+|||++ ++
T Consensus        81 v~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~-~~  154 (190)
T cd05147          81 IPCPEPILL--KSHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH-DG  154 (190)
T ss_pred             CCCCcEEEe--cCCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE-CC
Confidence            744333222  22389999999988776544456788899999999999999999 677   999999999999998 47


Q ss_pred             CeEEeecCCCccc
Q 003836          640 NARISDFGLAKLL  652 (792)
Q Consensus       640 ~~kl~Dfg~a~~~  652 (792)
                      .++|+|||++...
T Consensus       155 ~v~LiDFG~a~~~  167 (190)
T cd05147         155 KLYIIDVSQSVEH  167 (190)
T ss_pred             cEEEEEccccccC
Confidence            8999999999754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.79  E-value=1.3e-19  Score=180.66  Aligned_cols=173  Identities=10%  Similarity=0.087  Sum_probs=131.2

Q ss_pred             HHHHHHhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHH---------HHHHHHHhcccCCCCcccccce
Q 003836          497 ELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE---------FKAEVNGIGQTHHKNLVRLLGY  567 (792)
Q Consensus       497 el~~~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~---------~~~Ei~~l~~l~h~niv~l~g~  567 (792)
                      ++....++..+.||.|+||.||+...   +...+|+|.+.......+..         +++|+..+.+++|++|..+..+
T Consensus        27 ~~l~~~y~~~~~l~~~~f~~v~l~~~---~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~  103 (232)
T PRK10359         27 DFLSYNIKTIKVFRNIDDTKVSLIDT---DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDF  103 (232)
T ss_pred             HHhhCceEEEEEecCCCceEEEEEec---CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEe
Confidence            33444455567899999999998633   24579999997654433332         6899999999999999999888


Q ss_pred             eccC--------CceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCC
Q 003836          568 CDEG--------QNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY  639 (792)
Q Consensus       568 ~~~~--------~~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~  639 (792)
                      +...        ...+|||||++|.+|.++..    ++.    ....+++.+|..+|+.   +++||||||+||+++.++
T Consensus       104 ~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~----~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g  172 (232)
T PRK10359        104 YLLAERKTLRYAHTYIMLIEYIEGVELNDMPE----ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG  172 (232)
T ss_pred             eeecccccccccCCeEEEEEEECCccHHHhhh----ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC
Confidence            6533        35789999999999988742    222    3456999999999999   999999999999999988


Q ss_pred             CeEEeecCCCccccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHH
Q 003836          640 NARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEII  697 (792)
Q Consensus       640 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~  697 (792)
                       ++|+|||..+....+....             .+.....+..++|+||||+.+..+.
T Consensus       173 -i~liDfg~~~~~~e~~a~d-------------~~vler~y~~~~di~~lg~~~~~~~  216 (232)
T PRK10359        173 -LRIIDLSGKRCTAQRKAKD-------------RIDLERHYGIKNEIKDLGYYLLIYK  216 (232)
T ss_pred             -EEEEECCCcccccchhhHH-------------HHHHHhHhcccccccceeEeehHHH
Confidence             9999999887553211111             1233445678999999999987654

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.78  E-value=4.4e-19  Score=193.30  Aligned_cols=215  Identities=25%  Similarity=0.434  Sum_probs=163.1

Q ss_pred             hcccCCCCcccccceeccCCceEEEEEeccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCe-EecCCCC
Q 003836          553 IGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQI-IHCDIKP  630 (792)
Q Consensus       553 l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i-vH~dikp  630 (792)
                      |+.+.|.|+.+++|.+.++...+.|.+|+..|+|.+.+... ..+++..+..++++|++||.|||+.   .| .|+.+++
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l~s   77 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNS---PIGYHGALKS   77 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcC---cceeeeeecc
Confidence            45789999999999999999999999999999999999874 5789999999999999999999997   44 9999999


Q ss_pred             CcEEEcCCCCeEEeecCCCccccCC-CCCccccccccCCcccccccccC-------CCCcccceehHHHHHHHHHhcCcC
Q 003836          631 QNILLDDHYNARISDFGLAKLLTLD-QSHTNTAIRGTKGYVAPEWFRNM-------PITVKVDVYSYGVLLLEIICLRRN  702 (792)
Q Consensus       631 ~NILl~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~-------~~~~k~DV~S~Gv~l~el~tg~~p  702 (792)
                      .|.++|....+||+|||+....... .........-..-|.|||.++..       ..+.+.||||||++++|+++.+.|
T Consensus        78 ~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~  157 (484)
T KOG1023|consen   78 SNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGP  157 (484)
T ss_pred             ccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCc
Confidence            9999999999999999998876431 11111222245569999998763       257789999999999999999999


Q ss_pred             CCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          703 IDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       703 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      |+......+...+......     .......+.+....  +...++..++..||..+|++||++++|...++.+.
T Consensus       158 ~~~~~~~~~~~eii~~~~~-----~~~~~~rP~i~~~~--e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~  225 (484)
T KOG1023|consen  158 FDLRNLVEDPDEIILRVKK-----GGSNPFRPSIELLN--ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTIN  225 (484)
T ss_pred             cccccccCChHHHHHHHHh-----cCCCCcCcchhhhh--hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhc
Confidence            9775443221111111100     00011111111111  33447899999999999999999999999887654

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.78  E-value=1.3e-18  Score=172.36  Aligned_cols=139  Identities=17%  Similarity=0.117  Sum_probs=110.2

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccc--------------------------hHHHHHHHHHhcccCCCC
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS--------------------------EKEFKAEVNGIGQTHHKN  560 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~--------------------------~~~~~~Ei~~l~~l~h~n  560 (792)
                      ..||+|++|.||+|...  +++.||||+++......                          ...+..|.+.+.++.|++
T Consensus         3 ~~ig~G~~~~Vy~a~~~--~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05145           3 GCISTGKEANVYHARTG--DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG   80 (190)
T ss_pred             ceeecCCCcEEEEEEcC--CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            56999999999999765  57899999987542110                          122467899999999998


Q ss_pred             cccccceeccCCceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhh-ccCCCeEecCCCCCcEEEcCCC
Q 003836          561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE-ECCTQIIHCDIKPQNILLDDHY  639 (792)
Q Consensus       561 iv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~dikp~NILl~~~~  639 (792)
                      +.....+...  ..+|||||++++++.........++.....+++.|++.+|.++|+ .   +|+||||||+|||++ ++
T Consensus        81 i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~-~~  154 (190)
T cd05145          81 VPVPEPILLK--KNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH-DG  154 (190)
T ss_pred             CCCceEEEec--CCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE-CC
Confidence            7554443332  248999999988655443334567788899999999999999999 7   999999999999999 88


Q ss_pred             CeEEeecCCCcccc
Q 003836          640 NARISDFGLAKLLT  653 (792)
Q Consensus       640 ~~kl~Dfg~a~~~~  653 (792)
                      .++|+|||+++...
T Consensus       155 ~~~liDFG~a~~~~  168 (190)
T cd05145         155 KPYIIDVSQAVELD  168 (190)
T ss_pred             CEEEEEcccceecC
Confidence            99999999998764

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.77  E-value=2.9e-18  Score=171.54  Aligned_cols=197  Identities=19%  Similarity=0.288  Sum_probs=166.6

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEEEec
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +.+.++||+|.||.++.|+ +.-.+++||||.-...  ...-++..|-+.++.| ..++|..++-|-.++.+-.||+|.+
T Consensus        30 yrVGkKIGeGsFG~lf~G~-Nl~nne~VAIKfEPrk--S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL  106 (449)
T KOG1165|consen   30 YRVGKKIGEGSFGVLFLGK-NLYNNEPVAIKFEPRK--SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL  106 (449)
T ss_pred             ceeccccccCcceeeeccc-ccccCceEEEEecccc--CCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh
Confidence            3456889999999999996 4556789999975443  2345788888888888 4799999999999999999999988


Q ss_pred             cCCCcccccc-CCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC-----CCCeEEeecCCCccccCC
Q 003836          582 SNGTVASFLF-GDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD-----HYNARISDFGLAKLLTLD  655 (792)
Q Consensus       582 ~~gsL~~~l~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~-----~~~~kl~Dfg~a~~~~~~  655 (792)
                       +-||++++. -.++++.++...||.|+..-++|+|++   .+|.|||||+|+||..     ...+.|+|||+|+.....
T Consensus       107 -GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp  182 (449)
T KOG1165|consen  107 -GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDP  182 (449)
T ss_pred             -CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhhhcCc
Confidence             568888764 346899999999999999999999999   9999999999999963     335899999999988665


Q ss_pred             CCCc------cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcc
Q 003836          656 QSHT------NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNE  706 (792)
Q Consensus       656 ~~~~------~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~  706 (792)
                      ....      .....||.+||+--...+.+-+.+.|.=|+|-+++..+-|..||...
T Consensus       183 ~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGL  239 (449)
T KOG1165|consen  183 KTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL  239 (449)
T ss_pred             cccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccc
Confidence            4332      34456999999999999999999999999999999999999999764

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.76  E-value=4.9e-19  Score=200.97  Aligned_cols=246  Identities=23%  Similarity=0.251  Sum_probs=180.7

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHH--hcccCCCCcccccceeccCCceEEEEEe
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNG--IGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~--l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      .+.+.||++.|=.|.+++.+.|   .|+||++-+.. .-....|.++++-  ...++|||.+++.-.-...+..|||-+|
T Consensus        26 ~~~~~LGstRFlKv~r~k~~eG---~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy  102 (1431)
T KOG1240|consen   26 HYVENLGSTRFLKVARAKDREG---LVVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY  102 (1431)
T ss_pred             eeecccCchhhhhhhhccCCCc---eEEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence            4567899999999999987643   49999987654 3344555554443  4456899999999888888888899999


Q ss_pred             ccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          581 MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       581 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      ..+ +|.+.|..+..+...+..-|+.|++.||.-+|..   +|+|||||.+||||+.-.=+.|+||.--+-...++..+.
T Consensus       103 vkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPa  178 (1431)
T KOG1240|consen  103 VKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPA  178 (1431)
T ss_pred             Hhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCCCCCcc
Confidence            877 8999998777888889999999999999999999   999999999999999998899999988765433332221


Q ss_pred             ------ccccccCCcccccccccC----------C-CCcccceehHHHHHHHHHhc-CcCCCcchhhhhhhhHHHHHHHh
Q 003836          661 ------TAIRGTKGYVAPEWFRNM----------P-ITVKVDVYSYGVLLLEIICL-RRNIDNEISKVDKAILTDWAYDR  722 (792)
Q Consensus       661 ------~~~~gt~~y~aPE~~~~~----------~-~~~k~DV~S~Gv~l~el~tg-~~p~~~~~~~~~~~~~~~~~~~~  722 (792)
                            .+.+.-..|+|||.+...          . .+++-||||+||++.||++- +.+|+.. +.        .++..
T Consensus       179 df~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS-QL--------~aYr~  249 (1431)
T KOG1240|consen  179 DFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS-QL--------LAYRS  249 (1431)
T ss_pred             cceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH-HH--------HhHhc
Confidence                  111223369999987431          2 67889999999999999985 5555421 11        11222


Q ss_pred             hcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHh
Q 003836          723 YQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQML  773 (792)
Q Consensus       723 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L  773 (792)
                      ......+.++.. +++       ..+..++..|++.||++|.++++.++.-
T Consensus       250 ~~~~~~e~~Le~-Ied-------~~~Rnlil~Mi~rdPs~RlSAedyL~~y  292 (1431)
T KOG1240|consen  250 GNADDPEQLLEK-IED-------VSLRNLILSMIQRDPSKRLSAEDYLQKY  292 (1431)
T ss_pred             cCccCHHHHHHh-CcC-------ccHHHHHHHHHccCchhccCHHHHHHhh
Confidence            212222222221 111       2567789999999999999999999863

>PF00954 S_locus_glycop: S-locus glycoprotein family; InterPro: IPR000858 In Brassicaceae, self-incompatible plants have a self/non-self recognition system, which involves the inability of flowering plants to achieve self-fertilisation

Probab=99.75  E-value=3.9e-18  Score=151.99  Aligned_cols=87  Identities=28%  Similarity=0.499  Sum_probs=69.3

Q ss_pred             EEEEecccceeeeccccccccccEEEEEEecCCcEEEEecCCCCCCCcceeEEeccCCccccccccccCCCCcCCCCCCc
Q 003836          228 LYVLRENKQRASLVPETVSAKENYLRATLNFDGVFIFYSHPKNNSTGDAIWSVSDVLPENICINNDIRKGLGSGICGFNS  307 (792)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~dG~l~~y~~~~~~~~~~~~w~~~~~~p~~~C~~~~~~~~~~~g~CG~~g  307 (792)
                      .+.+..+.++.+++. ...+.+.++|++|+++|++++|.|......    |...|.+|.++||+        |+.||+||
T Consensus        24 ~~~fv~~~~e~~~t~-~~~~~s~~~r~~ld~~G~l~~~~w~~~~~~----W~~~~~~p~d~Cd~--------y~~CG~~g   90 (110)
T PF00954_consen   24 NYSFVSNNEEVYYTY-SLSNSSVLSRLVLDSDGQLQRYIWNESTQS----WSVFWSAPKDQCDV--------YGFCGPNG   90 (110)
T ss_pred             EEEEEECCCeEEEEE-ecCCCceEEEEEEeeeeEEEEEEEecCCCc----EEEEEEecccCCCC--------ccccCCcc
Confidence            344556666666653 344667899999999999999999765544    66666679999998        89999999


Q ss_pred             ccccCCCCCCceecCCCCccCC
Q 003836          308 ICSISGAKRPICQCPKGFSLLD  329 (792)
Q Consensus       308 ~C~~~~~~~~~C~Cl~GF~~~~  329 (792)
                      +|+.  +..+.|+||+||+|++
T Consensus        91 ~C~~--~~~~~C~Cl~GF~P~n  110 (110)
T PF00954_consen   91 ICNS--NNSPKCSCLPGFEPKN  110 (110)
T ss_pred             EeCC--CCCCceECCCCcCCCc
Confidence            9975  4568899999999975

This is sporophytically controlled by multiple alleles at a single locus (S). There are a total of 50 different S alleles in Brassica oleracea. S-locus glycoproteins, as well as S-receptor kinases, are in linkage with the S-alleles []. Most of the proteins within this family contain apple-like domain (IPR003609 from INTERPRO), which is predicted to possess protein- and/or carbohydrate-binding functions.; GO: 0048544 recognition of pollen

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.73  E-value=1e-17  Score=163.23  Aligned_cols=183  Identities=16%  Similarity=0.071  Sum_probs=136.5

Q ss_pred             hhhcCccccceEEEeeecCCCceEEEEEEcccccccc----hHHHHHHHHHhcccC-CCCcccccceeccCCceEEEEEe
Q 003836          506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS----EKEFKAEVNGIGQTH-HKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~----~~~~~~Ei~~l~~l~-h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      ...|++|+||+||.+.   ..+.+++.+.+.....-.    ...+.+|+++|++++ |+++++++++    +..+++|||
T Consensus         7 ~~~l~~~~f~~v~~~~---~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey   79 (218)
T PRK12274          7 NEPLKSDTFGRILLVR---GGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY   79 (218)
T ss_pred             ceeecCCCcceEEEee---cCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence            3579999999999763   345678877776543211    225889999999995 5889999886    457999999


Q ss_pred             ccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCC-CCCcEEEcCCCCeEEeecCCCccccCCCCC-
Q 003836          581 MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDI-KPQNILLDDHYNARISDFGLAKLLTLDQSH-  658 (792)
Q Consensus       581 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~di-kp~NILl~~~~~~kl~Dfg~a~~~~~~~~~-  658 (792)
                      +++.+|...+..       ....++.|++++|.++|+.   +|+|||| ||+|||++.++.++|+|||++......... 
T Consensus        80 I~G~~L~~~~~~-------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~  149 (218)
T PRK12274         80 LAGAAMYQRPPR-------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWM  149 (218)
T ss_pred             ecCccHHhhhhh-------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHH
Confidence            999988754321       1245788999999999999   9999999 799999999999999999999865432210 


Q ss_pred             ---c--------cccccccCCccccccccc-CCCC-cccceehHHHHHHHHHhcCcCCCc
Q 003836          659 ---T--------NTAIRGTKGYVAPEWFRN-MPIT-VKVDVYSYGVLLLEIICLRRNIDN  705 (792)
Q Consensus       659 ---~--------~~~~~gt~~y~aPE~~~~-~~~~-~k~DV~S~Gv~l~el~tg~~p~~~  705 (792)
                         .        ......++.|++|+...- ...+ ...+.++.|.-+|.++|++.+.-.
T Consensus       150 r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~  209 (218)
T PRK12274        150 RLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE  209 (218)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence               0        011225777777775432 2333 567889999999999999987643

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.73  E-value=1.3e-17  Score=171.18  Aligned_cols=226  Identities=20%  Similarity=0.266  Sum_probs=145.8

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCC----------CCccccccee-----
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHH----------KNLVRLLGYC-----  568 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h----------~niv~l~g~~-----  568 (792)
                      +.||.|+++.||.+.. ..+++.+|||+.....   ....+++++|.-.+..+.+          -.++..++..     
T Consensus        18 ~~i~~g~~~~v~~v~d-~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~   96 (288)
T PF14531_consen   18 RIIGKGGFSIVFEVTD-VETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGK   96 (288)
T ss_dssp             EEEEEETTEEEEEEEE-TTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS
T ss_pred             cccccCCceEEEEEEE-ccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCC
Confidence            5699999999999975 4667899999875433   3345677777766665433          2222222221     


Q ss_pred             ----ccCC--------ceEEEEEeccCCCcccccc---CC----CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCC
Q 003836          569 ----DEGQ--------NRLLVYEFMSNGTVASFLF---GD----SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIK  629 (792)
Q Consensus       569 ----~~~~--------~~~lV~E~~~~gsL~~~l~---~~----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dik  629 (792)
                          ....        ..+++|+-+. ++|.+++.   ..    ..+....++.+..|+.+.+++||+.   |++|+||+
T Consensus        97 ~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHgdi~  172 (288)
T PF14531_consen   97 PPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHGDIK  172 (288)
T ss_dssp             -SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEEST-S
T ss_pred             CcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEecccc
Confidence                1111        2367777774 57877653   21    1234455677779999999999999   99999999


Q ss_pred             CCcEEEcCCCCeEEeecCCCccccCCCCCccccccccCCccccccccc--------CCCCcccceehHHHHHHHHHhcCc
Q 003836          630 PQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN--------MPITVKVDVYSYGVLLLEIICLRR  701 (792)
Q Consensus       630 p~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~k~DV~S~Gv~l~el~tg~~  701 (792)
                      |+|++++.+|.++|+||+...........    ...+..|.+||....        ..++.+.|.|++|+++|.|++++.
T Consensus       173 ~~nfll~~~G~v~Lg~F~~~~r~g~~~~~----~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~l  248 (288)
T PF14531_consen  173 PENFLLDQDGGVFLGDFSSLVRAGTRYRC----SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRL  248 (288)
T ss_dssp             GGGEEE-TTS-EEE--GGGEEETTEEEEG----GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-
T ss_pred             eeeEEEcCCCCEEEcChHHHeecCceeec----cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccC
Confidence            99999999999999999877654321111    224577999997643        357899999999999999999999


Q ss_pred             CCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCC
Q 003836          702 NIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHR  763 (792)
Q Consensus       702 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~R  763 (792)
                      ||...........                    .+ ..+. +.++.+..++..+|+.+|.+|
T Consensus       249 Pf~~~~~~~~~~~--------------------~f-~~C~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  249 PFGLSSPEADPEW--------------------DF-SRCR-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             STCCCGGGSTSGG--------------------GG-TTSS----HHHHHHHHHHT-SSGGGS
T ss_pred             CCCCCCccccccc--------------------cc-hhcC-CcCHHHHHHHHHHccCCcccC
Confidence            9986543322110                    11 1233 677888999999999999988

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.72  E-value=1.6e-18  Score=188.29  Aligned_cols=227  Identities=21%  Similarity=0.197  Sum_probs=178.5

Q ss_pred             hcCccccceEEEeeec--CCCceEEEEEEcccccccc--hHHHHHHHHHhcccC-CCCcccccceeccCCceEEEEEecc
Q 003836          508 ELGRGAFGTVYKGFVN--MGSSNHVAVKKLNSVFQDS--EKEFKAEVNGIGQTH-HKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       508 ~lG~G~~g~Vy~g~~~--~~~~~~vavK~~~~~~~~~--~~~~~~Ei~~l~~l~-h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      ++|+|.||.|+++.--  .+.+..+|+|.+++.....  ......|..+++..+ ||.+|++.-.+..+...+++++|..
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            3789999999875321  1234567888776543211  125566778888887 9999999999999999999999999


Q ss_pred             CCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          583 NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       583 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      +|.|...+.......+.........++-+++++|+.   +|+|||+|++||+++.+|.+|+.|||+++..-.....    
T Consensus        81 gg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~----  153 (612)
T KOG0603|consen   81 GGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA----  153 (612)
T ss_pred             cchhhhccccCCchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhhc----
Confidence            999999998887777777777888899999999999   9999999999999999999999999999876433222    


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCH
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV  742 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  742 (792)
                       +||..|||||++.  ....++|.||||++++||+||..||..+..                    ..++.  .....+.
T Consensus       154 -cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~~~--------------------~~Il~--~~~~~p~  208 (612)
T KOG0603|consen  154 -CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGDTM--------------------KRILK--AELEMPR  208 (612)
T ss_pred             -ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchHHH--------------------HHHhh--hccCCch
Confidence             7899999999998  678899999999999999999999976211                    11111  1223355


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCH
Q 003836          743 TMLHRFVMVAFWCIQEDPSHRPTM  766 (792)
Q Consensus       743 ~~~~~l~~l~~~Cl~~~p~~RPs~  766 (792)
                      +....+.++...++..+|..|.-.
T Consensus       209 ~l~~~a~~~~~~l~~r~p~nrLg~  232 (612)
T KOG0603|consen  209 ELSAEARSLFRQLFKRNPENRLGA  232 (612)
T ss_pred             hhhHHHHHHHHHHHhhCHHHHhcc
Confidence            566667777777888888888644

>PRK10345 hypothetical protein; Provisional

Probab=99.70  E-value=5.1e-17  Score=161.74  Aligned_cols=134  Identities=18%  Similarity=0.209  Sum_probs=105.0

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhccc-----CCCCcccccceeccCC---ceE-EE
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT-----HHKNLVRLLGYCDEGQ---NRL-LV  577 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-----~h~niv~l~g~~~~~~---~~~-lV  577 (792)
                      +.||+|++|.||.  .. .... .+||++........+.+.+|+.++.++     +||||++++|++.++.   ..+ +|
T Consensus         8 ~~LG~G~~~~Vy~--hp-~~~~-k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I   83 (210)
T PRK10345          8 SPLGTGRHRKCYA--HP-EDAQ-RCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI   83 (210)
T ss_pred             ceecCCCceEEEE--CC-CCcC-eEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence            5799999999996  33 2233 368887665444567899999999999     5799999999998764   333 78


Q ss_pred             EEe--ccCCCccccccCCCCCchhHHHHHHHHHHHHH-HHHhhccCCCeEecCCCCCcEEEcC----CCCeEEeecCCCc
Q 003836          578 YEF--MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGL-FYLHEECCTQIIHCDIKPQNILLDD----HYNARISDFGLAK  650 (792)
Q Consensus       578 ~E~--~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL-~yLH~~~~~~ivH~dikp~NILl~~----~~~~kl~Dfg~a~  650 (792)
                      +||  +++|+|.+++.+. .+++.  ..++.+++.++ +|||+.   +|+||||||+|||++.    +..++|+||+.+.
T Consensus        84 ~e~~G~~~~tL~~~l~~~-~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~  157 (210)
T PRK10345         84 ADFDGKPSITLTEFAEQC-RYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVCDNIGES  157 (210)
T ss_pred             ecCCCCcchhHHHHHHcc-cccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEEECCCCc
Confidence            999  6689999999653 34444  35678888887 999999   9999999999999974    3479999954443

>smart00090 RIO RIO-like kinase

Probab=99.70  E-value=1.2e-16  Score=163.21  Aligned_cols=142  Identities=19%  Similarity=0.211  Sum_probs=110.0

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccccc------------------------chHHHHHHHHHhcccCCC
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD------------------------SEKEFKAEVNGIGQTHHK  559 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~------------------------~~~~~~~Ei~~l~~l~h~  559 (792)
                      .+.+.||+|++|.||+|..+..+++.||+|+++.....                        ....+.+|+.++.++.+.
T Consensus        31 ~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~  110 (237)
T smart00090       31 AIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEA  110 (237)
T ss_pred             HhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence            34578999999999999733445789999998743210                        012357899999999763


Q ss_pred             C--cccccceeccCCceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCC-eEecCCCCCcEEEc
Q 003836          560 N--LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ-IIHCDIKPQNILLD  636 (792)
Q Consensus       560 n--iv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-ivH~dikp~NILl~  636 (792)
                      .  +.+++++    ...++||||+++.+|...+.............++.||+.+|++||+.   + |+|+||||+||+++
T Consensus       111 ~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp~NIli~  183 (237)
T smart00090      111 GVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSEYNILVH  183 (237)
T ss_pred             CCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCChhhEEEE
Confidence            3  3444433    23589999999999887764444556666789999999999999999   8 99999999999999


Q ss_pred             CCCCeEEeecCCCcccc
Q 003836          637 DHYNARISDFGLAKLLT  653 (792)
Q Consensus       637 ~~~~~kl~Dfg~a~~~~  653 (792)
                       ++.++|+|||.+....
T Consensus       184 -~~~i~LiDFg~a~~~~  199 (237)
T smart00090      184 -DGKVVIIDVSQSVELD  199 (237)
T ss_pred             -CCCEEEEEChhhhccC
Confidence             8899999999987543

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.65  E-value=4.4e-16  Score=157.33  Aligned_cols=134  Identities=19%  Similarity=0.248  Sum_probs=112.6

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEccccccc--------chHHHHHHHHHhcccCCCCcccccceeccCCceEEEE
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--------SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~--------~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~  578 (792)
                      +.||+|++|.||+|..   .+..+++|+.......        ....+.+|++++..++|+++.....++.+....++||
T Consensus         2 ~~l~~G~~~~vy~~~~---~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~   78 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF---LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVM   78 (211)
T ss_pred             cccccCceEEEEEEee---CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEE
Confidence            4689999999999975   3456888876532211        1245788999999999999988888887778889999


Q ss_pred             EeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCcc
Q 003836          579 EFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKL  651 (792)
Q Consensus       579 E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~  651 (792)
                      ||+++++|.+++.....    .+..++.+++.+|.++|+.   +++|+|++|+|||++ ++.++|+|||.++.
T Consensus        79 e~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879         79 EYIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             EEeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            99999999998854322    7889999999999999998   999999999999999 78999999999874

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.65  E-value=1.8e-16  Score=184.51  Aligned_cols=197  Identities=21%  Similarity=0.210  Sum_probs=155.8

Q ss_pred             HHHHHHhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccC---CCCcccccceeccCCc
Q 003836          497 ELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH---HKNLVRLLGYCDEGQN  573 (792)
Q Consensus       497 el~~~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~---h~niv~l~g~~~~~~~  573 (792)
                      ++...+..+.++||+|+||+||+|...+  ++.||+|.-+...   --+|.--.+++.||+   -+-|..+.....-.+.
T Consensus       694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~~--~~~~alK~e~P~~---~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~  768 (974)
T KOG1166|consen  694 EVGGEKFCISKEIGEGSYGSVYVATHSN--GKLVALKVEKPPN---PWEFYICLQVMERLKPQMLPSIMHISSAHVFQNA  768 (974)
T ss_pred             eecceeEEEEeeeccccceEEEEeecCC--CcEEEEEeecCCC---ceeeeehHHHHHhhchhhhcchHHHHHHHccCCc
Confidence            3334444566789999999999998654  7899999866432   223333344445554   2334445555566677


Q ss_pred             eEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEc-------CCCCeEEeec
Q 003836          574 RLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLD-------DHYNARISDF  646 (792)
Q Consensus       574 ~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~-------~~~~~kl~Df  646 (792)
                      -+||+||.+.|+|.+++...+.++|.....++.|+++-++.||..   +|||+||||+|+||.       ++.-++|+||
T Consensus       769 S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDf  845 (974)
T KOG1166|consen  769 SVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYLIDF  845 (974)
T ss_pred             ceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEEEec
Confidence            889999999999999999888999999999999999999999998   999999999999995       3456899999


Q ss_pred             CCCccccCCCC-CccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCc
Q 003836          647 GLAKLLTLDQS-HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRR  701 (792)
Q Consensus       647 g~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~  701 (792)
                      |.+.-+..-.. ......++|-.+-.+|...+.++++++|-|.|.-+++-|+-|+.
T Consensus       846 G~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y  901 (974)
T KOG1166|consen  846 GRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY  901 (974)
T ss_pred             ccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence            99876543332 24455678999999999999999999999999999999999874

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.64  E-value=3.9e-16  Score=159.62  Aligned_cols=196  Identities=23%  Similarity=0.293  Sum_probs=136.8

Q ss_pred             CCCCcccccceecc---------------------------CCceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHH
Q 003836          557 HHKNLVRLLGYCDE---------------------------GQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIA  609 (792)
Q Consensus       557 ~h~niv~l~g~~~~---------------------------~~~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia  609 (792)
                      +|||||++.++|.+                           +...|+||..++. +|.+++..+. .+.....-|+.|++
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~-~s~r~~~~~laQlL  351 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH-RSYRTGRVILAQLL  351 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC-CchHHHHHHHHHHH
Confidence            68888888877642                           3457889888765 8888886543 45556667888999


Q ss_pred             HHHHHHhhccCCCeEecCCCCCcEEEc--CCCC--eEEeecCCCccccCC-----CCCccccccccCCcccccccccCC-
Q 003836          610 GGLFYLHEECCTQIIHCDIKPQNILLD--DHYN--ARISDFGLAKLLTLD-----QSHTNTAIRGTKGYVAPEWFRNMP-  679 (792)
Q Consensus       610 ~gL~yLH~~~~~~ivH~dikp~NILl~--~~~~--~kl~Dfg~a~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~-  679 (792)
                      +|+.|||.+   +|.|||+|.+||||.  ++..  ..|+|||++---...     -.......-|...-||||+....+ 
T Consensus       352 Eav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PG  428 (598)
T KOG4158|consen  352 EAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPG  428 (598)
T ss_pred             HHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCC
Confidence            999999999   999999999999984  4443  688999987532221     111122334777899999985432 


Q ss_pred             -----CCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHH
Q 003836          680 -----ITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFW  754 (792)
Q Consensus       680 -----~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  754 (792)
                           --.|+|.|+.|.+.||+++...||....+.    .+..   ..+++..+..         .+...+..+.+++..
T Consensus       429 p~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem----~L~~---r~Yqe~qLPa---------lp~~vpp~~rqlV~~  492 (598)
T KOG4158|consen  429 PNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEM----LLDT---RTYQESQLPA---------LPSRVPPVARQLVFD  492 (598)
T ss_pred             CceeeccchhhhhhhhhhHHHHhccCCcccccchh----eech---hhhhhhhCCC---------CcccCChHHHHHHHH
Confidence                 226899999999999999999999763211    0000   1122222221         223345667889999


Q ss_pred             ccccCCCCCCCHHhHHHHh
Q 003836          755 CIQEDPSHRPTMRKVTQML  773 (792)
Q Consensus       755 Cl~~~p~~RPs~~evl~~L  773 (792)
                      .|+.||++|++..-....|
T Consensus       493 lL~r~pskRvsp~iAANvl  511 (598)
T KOG4158|consen  493 LLKRDPSKRVSPNIAANVL  511 (598)
T ss_pred             HhcCCccccCCccHHHhHH
Confidence            9999999999986555444

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.64  E-value=6.2e-16  Score=154.71  Aligned_cols=130  Identities=18%  Similarity=0.274  Sum_probs=106.7

Q ss_pred             hcCccccceEEEeeecCCCceEEEEEEccccc-cc-------chHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QD-------SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       508 ~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~-------~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      .||+|++|.||+|...   +..+++|+..... ..       ...++.+|++++.+++|+++.....++......++|||
T Consensus         1 ~ig~G~~~~vy~~~~~---~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e   77 (199)
T TIGR03724         1 LIAKGAEAIIYLGDFL---GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVME   77 (199)
T ss_pred             CCCCCceEEEEEeecC---CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEE
Confidence            3899999999999743   4578999854321 11       12567889999999999887666666667777899999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCcc
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKL  651 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~  651 (792)
                      |+++++|.+++.....       .++.+++++|.+||+.   +++|+|++|+||+++ ++.++++|||+++.
T Consensus        78 ~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724        78 YIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             EECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence            9999999988754221       8899999999999998   999999999999999 88999999999875

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.64  E-value=5.5e-17  Score=173.24  Aligned_cols=169  Identities=22%  Similarity=0.341  Sum_probs=128.2

Q ss_pred             ceEEEEEeccCCCccccccCC---CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCC
Q 003836          573 NRLLVYEFMSNGTVASFLFGD---SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLA  649 (792)
Q Consensus       573 ~~~lV~E~~~~gsL~~~l~~~---~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a  649 (792)
                      ..++.|+++...+|.++|.++   ...++...+.++.|++.|+.|   +   +.+|+|+||.||.+..+..+||.|||+.
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl~  403 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGLV  403 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhhe
Confidence            578999999999999999765   356788899999999999999   5   8999999999999999999999999999


Q ss_pred             ccccCCC-----CCccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhh
Q 003836          650 KLLTLDQ-----SHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRY  723 (792)
Q Consensus       650 ~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~  723 (792)
                      .......     ....+...||..||+||.+.+..|+.|+||||||++|+|++. -..+++..           .+....
T Consensus       404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~-----------~t~~d~  472 (516)
T KOG1033|consen  404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERI-----------ATLTDI  472 (516)
T ss_pred             eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHH-----------Hhhhhh
Confidence            8766554     223345679999999999999999999999999999999987 33332211           111222


Q ss_pred             cccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHH
Q 003836          724 QERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMR  767 (792)
Q Consensus       724 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~  767 (792)
                      +++.+....    ...+     ++-..+..+++.+.|.+||++.
T Consensus       473 r~g~ip~~~----~~d~-----p~e~~ll~~lls~~p~~RP~~~  507 (516)
T KOG1033|consen  473 RDGIIPPEF----LQDY-----PEEYTLLQQLLSPSPEERPSAI  507 (516)
T ss_pred             hcCCCChHH----hhcC-----cHHHHHHHHhcCCCcccCchHH
Confidence            222222111    0111     1224678889999999999443

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.62  E-value=2.2e-15  Score=150.48  Aligned_cols=137  Identities=18%  Similarity=0.170  Sum_probs=106.9

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccc----------------------cchHHHHHHHHHhcccCCCC
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ----------------------DSEKEFKAEVNGIGQTHHKN  560 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~----------------------~~~~~~~~Ei~~l~~l~h~n  560 (792)
                      +.+.+.||+|+||.||++...  +++.+|||++.....                      .....+..|..++..+.|++
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~--~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   94 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDP--DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG   94 (198)
T ss_pred             hhcCCccccCcceEEEEEEcC--CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence            455678999999999999754  467899998654210                      01123677888899988874


Q ss_pred             --cccccceeccCCceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC
Q 003836          561 --LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH  638 (792)
Q Consensus       561 --iv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~  638 (792)
                        +++.++.    ...++||||+++++|......      ....+++.+++.++.++|+.   +|+|+||||+||+++++
T Consensus        95 i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~Nill~~~  161 (198)
T cd05144          95 FPVPKPIDW----NRHAVVMEYIDGVELYRVRVL------EDPEEVLDEILEEIVKAYKH---GIIHGDLSEFNILVDDD  161 (198)
T ss_pred             CCCCceeec----CCceEEEEEeCCcchhhcccc------ccHHHHHHHHHHHHHHHHHC---CCCcCCCCcccEEEcCC
Confidence              4444432    345899999999998876431      34567899999999999998   99999999999999999


Q ss_pred             CCeEEeecCCCccccC
Q 003836          639 YNARISDFGLAKLLTL  654 (792)
Q Consensus       639 ~~~kl~Dfg~a~~~~~  654 (792)
                      +.++|+|||++.....
T Consensus       162 ~~~~liDfg~~~~~~~  177 (198)
T cd05144         162 EKIYIIDWPQMVSTDH  177 (198)
T ss_pred             CcEEEEECCccccCCC
Confidence            9999999999976543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.61  E-value=1.9e-15  Score=173.93  Aligned_cols=132  Identities=18%  Similarity=0.265  Sum_probs=108.3

Q ss_pred             hhhcCccccceEEEeeecCCCceEEEEEEc-ccccc-------cchHHHHHHHHHhcccCCCCcccccceeccCCceEEE
Q 003836          506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKL-NSVFQ-------DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLV  577 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~-~~~~~-------~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV  577 (792)
                      .+.||+|+||+||+|.+..   +.+++|+. .+...       ...+.+.+|++++.+++|++++....++......++|
T Consensus       338 ~~~iG~G~~g~Vy~~~~~~---~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv  414 (535)
T PRK09605        338 DHLIGKGAEADIKKGEYLG---RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIV  414 (535)
T ss_pred             cceeccCCcEEEEEEeecC---ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEE
Confidence            4689999999999997642   23444432 21111       1235688999999999999999888888777788999


Q ss_pred             EEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccc
Q 003836          578 YEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLL  652 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~  652 (792)
                      |||+++++|.+++.        ...+++.+++++|.|||+.   +++||||||+|||+ +++.++|+|||+++..
T Consensus       415 ~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla~~~  477 (535)
T PRK09605        415 MEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS  477 (535)
T ss_pred             EEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence            99999999999874        4678999999999999998   99999999999999 6789999999999753

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.53  E-value=5.1e-14  Score=133.59  Aligned_cols=133  Identities=22%  Similarity=0.173  Sum_probs=114.2

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCC--CCcccccceeccCCceEEEEEeccCC
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHH--KNLVRLLGYCDEGQNRLLVYEFMSNG  584 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h--~niv~l~g~~~~~~~~~lV~E~~~~g  584 (792)
                      +.||+|.++.||++....   ..+++|.......  ...+.+|+..++.++|  .++++++++....+..++++||++++
T Consensus         4 ~~i~~g~~~~v~~~~~~~---~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~   78 (155)
T cd05120           4 KLLKGGLTNRVYLLGTKD---EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE   78 (155)
T ss_pred             eecccccccceEEEEecC---CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence            569999999999997642   5799999865433  5679999999999976  58999999988888999999999998


Q ss_pred             CccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCcc
Q 003836          585 TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKL  651 (792)
Q Consensus       585 sL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~  651 (792)
                      .+..+       +......++.+++++|++||.....+++|+|++|+|||+++.+.++++|||.++.
T Consensus        79 ~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120          79 TLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             ecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence            77765       5567788899999999999986445799999999999999989999999999874

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.53  E-value=3.1e-14  Score=140.84  Aligned_cols=137  Identities=20%  Similarity=0.205  Sum_probs=96.3

Q ss_pred             hhhcCccccceEEEeeecCCCceEEEEEEcccccccc--hHH----------------------HHHHHHHhcccCCCC-
Q 003836          506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS--EKE----------------------FKAEVNGIGQTHHKN-  560 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~--~~~----------------------~~~Ei~~l~~l~h~n-  560 (792)
                      .+.||+|+||+||++...  +++.||||++.......  ...                      ...|.+.+.++++.. 
T Consensus         2 ~~~lg~G~~g~Vy~a~~~--~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~   79 (187)
T cd05119           2 GGPIGTGKEADVYLALDG--DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGV   79 (187)
T ss_pred             CcccccccceeEEEEECC--CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCC
Confidence            357999999999999765  56789999876532111  111                      134555555554332 


Q ss_pred             -cccccceeccCCceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhh-ccCCCeEecCCCCCcEEEcCC
Q 003836          561 -LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE-ECCTQIIHCDIKPQNILLDDH  638 (792)
Q Consensus       561 -iv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~dikp~NILl~~~  638 (792)
                       +.+.+++    ...++||||++++.+........... .....++.+++.++.++|. .   +|+|+||||+||+++ +
T Consensus        80 ~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~-~  150 (187)
T cd05119          80 PVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVRLL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVD-D  150 (187)
T ss_pred             CCCceEec----CCCEEEEEEeCCCCccChhhhhhhhc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEE-C
Confidence             3333332    24589999999965433221111111 6678899999999999999 7   999999999999999 8


Q ss_pred             CCeEEeecCCCcccc
Q 003836          639 YNARISDFGLAKLLT  653 (792)
Q Consensus       639 ~~~kl~Dfg~a~~~~  653 (792)
                      +.++|+|||.+....
T Consensus       151 ~~~~liDfg~a~~~~  165 (187)
T cd05119         151 GKVYIIDVPQAVEID  165 (187)
T ss_pred             CcEEEEECccccccc
Confidence            999999999997554

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.52  E-value=1.8e-15  Score=173.20  Aligned_cols=253  Identities=22%  Similarity=0.316  Sum_probs=190.0

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccC-CCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTH-HKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~-h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +++.+.||+|+|+.|-...........+|+|.+....  ....+....|..+-..+. |+|++.+++...+.+..+++.|
T Consensus        22 ~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~  101 (601)
T KOG0590|consen   22 YKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLS  101 (601)
T ss_pred             ccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccccC
Confidence            3445569999999998876555556678888876553  223344555777666776 9999999999999999999999


Q ss_pred             eccCCCccccc-cCCC-CCchhHHHHHHHHHHHHHHHHh-hccCCCeEecCCCCCcEEEcCCC-CeEEeecCCCccccC-
Q 003836          580 FMSNGTVASFL-FGDS-KPNWKLRTEIAMGIAGGLFYLH-EECCTQIIHCDIKPQNILLDDHY-NARISDFGLAKLLTL-  654 (792)
Q Consensus       580 ~~~~gsL~~~l-~~~~-~l~~~~~~~i~~~ia~gL~yLH-~~~~~~ivH~dikp~NILl~~~~-~~kl~Dfg~a~~~~~-  654 (792)
                      |..++++.+.+ +... ..+....-....|+..++.|+| ..   ++.|+||||+|.+++..+ ..|++|||+|..+.. 
T Consensus       102 ~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~  178 (601)
T KOG0590|consen  102 YSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLATAYRNK  178 (601)
T ss_pred             cccccccccccccCCccCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhcccccc
Confidence            99999999999 5554 6677788889999999999999 76   999999999999999999 999999999998766 


Q ss_pred             CCC-Cccccccc-cCCcccccccccC-CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHh
Q 003836          655 DQS-HTNTAIRG-TKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEAL  731 (792)
Q Consensus       655 ~~~-~~~~~~~g-t~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  731 (792)
                      ... ......+| ++.|+|||...+. -..+..|+||.|+++.-+++|..|++........  ...|     .+..    
T Consensus       179 ~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~--~~~~-----~~~~----  247 (601)
T KOG0590|consen  179 NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGR--YSSW-----KSNK----  247 (601)
T ss_pred             CCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccccc--ceee-----cccc----
Confidence            222 22334567 9999999999874 4567899999999999999999998654432211  0011     1100    


Q ss_pred             hhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          732 VENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       732 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                        .......-........++...++..+|+.|.+.+++..
T Consensus       248 --~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~  285 (601)
T KOG0590|consen  248 --GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL  285 (601)
T ss_pred             --cccccCccccCChhhhhcccccccCCchhccccccccc
Confidence              00000111123345667778889899999999988764

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.51  E-value=8.3e-15  Score=167.08  Aligned_cols=206  Identities=19%  Similarity=0.241  Sum_probs=140.1

Q ss_pred             hhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCCC
Q 003836          506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGT  585 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~gs  585 (792)
                      .+.|..|++|.||...+. .+.++.|+|+-++.      .+.+-  ++.....|.+|                     |+
T Consensus        88 IklisngAygavylvrh~-~trqrfa~kiNkq~------lilRn--ilt~a~npfvv---------------------gD  137 (1205)
T KOG0606|consen   88 IKLISNGAYGAVYLVRHK-ETRQRFAMKINKQN------LILRN--ILTFAGNPFVV---------------------GD  137 (1205)
T ss_pred             eEeeccCCCCceeeeecc-ccccchhhcccccc------hhhhc--cccccCCccee---------------------ch
Confidence            357899999999998643 45667888543221      11110  22222333333                     44


Q ss_pred             ccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC---------
Q 003836          586 VASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ---------  656 (792)
Q Consensus       586 L~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~---------  656 (792)
                      -...+...+.++...        +.+++|||+.   +|+|||+||+|.||+.-|.+|+.|||+.+......         
T Consensus       138 c~tllk~~g~lPvdm--------vla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I  206 (1205)
T KOG0606|consen  138 CATLLKNIGPLPVDM--------VLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHI  206 (1205)
T ss_pred             hhhhcccCCCCcchh--------hHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcch
Confidence            444554434443332        7889999998   99999999999999999999999999998643211         


Q ss_pred             -----CCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHh
Q 003836          657 -----SHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEAL  731 (792)
Q Consensus       657 -----~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  731 (792)
                           ......++||+.|+|||++....|...+|.|++|+|+||.+-|..||..+...+-...+                
T Consensus       207 ~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~v----------------  270 (1205)
T KOG0606|consen  207 EKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQV----------------  270 (1205)
T ss_pred             HHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhh----------------
Confidence                 11123458999999999999999999999999999999999999999876432111111                


Q ss_pred             hhchh-cccCCHHHHHHHHHHHHHccccCCCCCCCHHh
Q 003836          732 VENDL-EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRK  768 (792)
Q Consensus       732 ~~~~~-~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~e  768 (792)
                      +.... -.+-+.....++.+++.+.|+.+|.+|--...
T Consensus       271 isd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~g  308 (1205)
T KOG0606|consen  271 ISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGG  308 (1205)
T ss_pred             hhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccch
Confidence            11111 01112234567788899999999999964433

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.48  E-value=1.3e-13  Score=141.18  Aligned_cols=135  Identities=17%  Similarity=0.115  Sum_probs=104.2

Q ss_pred             hhcC-ccccceEEEeeecCCCceEEEEEEccccc-------------ccchHHHHHHHHHhcccCCCCc--ccccceecc
Q 003836          507 EELG-RGAFGTVYKGFVNMGSSNHVAVKKLNSVF-------------QDSEKEFKAEVNGIGQTHHKNL--VRLLGYCDE  570 (792)
Q Consensus       507 ~~lG-~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~Ei~~l~~l~h~ni--v~l~g~~~~  570 (792)
                      ..|| .|+.|+||+....   +..++||+.....             ......+.+|++++.+++|++|  ++.+++...
T Consensus        37 ~~lg~~~g~gtv~~v~~~---~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~  113 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTP---GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVV  113 (239)
T ss_pred             ceeecCCCCccEEEEEeC---CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeee
Confidence            4687 8999999998654   4578998775311             1233568899999999998885  677776543


Q ss_pred             CCc----eEEEEEeccC-CCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEee
Q 003836          571 GQN----RLLVYEFMSN-GTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISD  645 (792)
Q Consensus       571 ~~~----~~lV~E~~~~-gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~D  645 (792)
                      ...    .++|+|++++ .+|.+++... .++.    ..+.+|+.+|.+||+.   +|+|+||||.|||++.++.++|+|
T Consensus       114 ~~~~~~~~~lV~e~l~G~~~L~~~l~~~-~l~~----~~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~LID  185 (239)
T PRK01723        114 RHGLFYRADILIERIEGARDLVALLQEA-PLSE----EQWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWLID  185 (239)
T ss_pred             ecCcceeeeEEEEecCCCCCHHHHHhcC-CCCH----HHHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEEEE
Confidence            322    3599999997 6888887543 3332    3467899999999999   999999999999999999999999


Q ss_pred             cCCCccc
Q 003836          646 FGLAKLL  652 (792)
Q Consensus       646 fg~a~~~  652 (792)
                      ||.+...
T Consensus       186 fg~~~~~  192 (239)
T PRK01723        186 FDRGELR  192 (239)
T ss_pred             CCCcccC
Confidence            9998753

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.37  E-value=5.7e-13  Score=133.81  Aligned_cols=199  Identities=23%  Similarity=0.328  Sum_probs=139.4

Q ss_pred             HHhcccCCCCcccccceeccCC-----ceEEEEEeccCCCccccccCC----CCCchhHHHHHHHHHHHHHHHHhhccCC
Q 003836          551 NGIGQTHHKNLVRLLGYCDEGQ-----NRLLVYEFMSNGTVASFLFGD----SKPNWKLRTEIAMGIAGGLFYLHEECCT  621 (792)
Q Consensus       551 ~~l~~l~h~niv~l~g~~~~~~-----~~~lV~E~~~~gsL~~~l~~~----~~l~~~~~~~i~~~ia~gL~yLH~~~~~  621 (792)
                      ..|-++-|.|||+++.|..+.+     +..++.|||..|+|..+|++.    ..+......+++-||..||.|||+ |.+
T Consensus       119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~P  197 (458)
T KOG1266|consen  119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CDP  197 (458)
T ss_pred             HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cCC
Confidence            3455567999999999885443     578999999999999999764    467788888999999999999998 578


Q ss_pred             CeEecCCCCCcEEEcCCCCeEEeecCCCcc---ccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHh
Q 003836          622 QIIHCDIKPQNILLDDHYNARISDFGLAKL---LTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC  698 (792)
Q Consensus       622 ~ivH~dikp~NILl~~~~~~kl~Dfg~a~~---~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t  698 (792)
                      .|+|+++..+-|++..++-+||.--.-...   .............+-++|.+||.=.....+.++|||+||...+||.-
T Consensus       198 piihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemai  277 (458)
T KOG1266|consen  198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAI  277 (458)
T ss_pred             ccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHH
Confidence            899999999999999999888853211100   00001111222346789999998777788899999999999999988


Q ss_pred             cCcCCCcchhhhh-hhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          699 LRRNIDNEISKVD-KAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       699 g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      +........+... .....         ..+..+-+.            .-..++..|++..|..||+|++++.
T Consensus       278 lEiq~tnseS~~~~ee~ia---------~~i~~len~------------lqr~~i~kcl~~eP~~rp~ar~llf  330 (458)
T KOG1266|consen  278 LEIQSTNSESKVEVEENIA---------NVIIGLENG------------LQRGSITKCLEGEPNGRPDARLLLF  330 (458)
T ss_pred             heeccCCCcceeehhhhhh---------hheeeccCc------------cccCcCcccccCCCCCCcchhhhhc
Confidence            8754322221111 00000         000000011            1123566799999999999998875

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.32  E-value=5.1e-12  Score=140.65  Aligned_cols=140  Identities=20%  Similarity=0.242  Sum_probs=98.0

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccc----------------------------------------hHHH
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS----------------------------------------EKEF  546 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~----------------------------------------~~~~  546 (792)
                      +.||.|++|.||+|++..  ++.||||+.+......                                        +-+|
T Consensus       123 ~plasaSigQVh~A~l~~--G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf  200 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVD--GKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL  200 (437)
T ss_pred             cceeeeehhheEEEEecC--CCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence            359999999999998863  5789999986431110                                        0124


Q ss_pred             HHHHHHhcccC----CCCccccccee-ccCCceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHH-HHHHHhhccC
Q 003836          547 KAEVNGIGQTH----HKNLVRLLGYC-DEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAG-GLFYLHEECC  620 (792)
Q Consensus       547 ~~Ei~~l~~l~----h~niv~l~g~~-~~~~~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~-gL~yLH~~~~  620 (792)
                      .+|.+.+.+++    |.+-+.+-..+ ......+|||||+++++|.++...... . ..+.+++..+++ .+..+|..  
T Consensus       201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~-~-~~~~~ia~~~~~~~l~ql~~~--  276 (437)
T TIGR01982       201 RREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA-G-LDRKALAENLARSFLNQVLRD--  276 (437)
T ss_pred             HHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc-C-CCHHHHHHHHHHHHHHHHHhC--
Confidence            45555555542    22222322223 234457999999999999987643211 0 134567777766 46788887  


Q ss_pred             CCeEecCCCCCcEEEcCCCCeEEeecCCCcccc
Q 003836          621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLT  653 (792)
Q Consensus       621 ~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~  653 (792)
                       +++|+|+||.||++++++.++++|||++..+.
T Consensus       277 -g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       277 -GFFHADLHPGNIFVLKDGKIIALDFGIVGRLS  308 (437)
T ss_pred             -CceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence             99999999999999999999999999998764

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.18  E-value=9.1e-11  Score=113.95  Aligned_cols=130  Identities=19%  Similarity=0.130  Sum_probs=96.6

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcc-cccceeccCCceEEEEEeccCCC
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLV-RLLGYCDEGQNRLLVYEFMSNGT  585 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv-~l~g~~~~~~~~~lV~E~~~~gs  585 (792)
                      +.|+.|..+.||++...   ++.+++|....... ....+.+|+.+++.+.+.+++ +++.+.  ....++||||+++.+
T Consensus         4 ~~l~~G~~~~vy~~~~~---~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~   77 (170)
T cd05151           4 SPLKGGMTNKNYRVEVA---NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSE   77 (170)
T ss_pred             eecCCcccCceEEEEEC---CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCc
Confidence            45889999999998653   56799998765422 234568899999998765654 444443  234589999999988


Q ss_pred             ccccccCCCCCchhHHHHHHHHHHHHHHHHhhcc--CCCeEecCCCCCcEEEcCCCCeEEeecCCCcc
Q 003836          586 VASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEEC--CTQIIHCDIKPQNILLDDHYNARISDFGLAKL  651 (792)
Q Consensus       586 L~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~  651 (792)
                      +....        .....++.+++++|+.||...  ...++|+|++|.||+++ ++.++++||+.+..
T Consensus        78 l~~~~--------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~  136 (170)
T cd05151          78 LLTED--------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM  136 (170)
T ss_pred             ccccc--------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence            76541        112346788999999999983  22369999999999999 66899999999864

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>cd01098 PAN_AP_plant Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins

Probab=99.13  E-value=7.7e-11  Score=99.85  Aligned_cols=72  Identities=18%  Similarity=0.360  Sum_probs=58.6

Q ss_pred             ceeeEeccCCCCCCCcccccCcCChhhHhhhccCCCccccceec--cCceeecccCCccCccCCCCCCcEEEeec
Q 003836          356 LYYIEELRNTDWPTSDYEQISPYGKDECVSSCLKDCQCSAAVLR--DDTCWKKKLPLSYGKTDRDETGTTFIKIR  428 (792)
Q Consensus       356 ~~~~~~~~~~~~p~~~~~~~~~~s~~~C~~~Cl~nCsC~A~~~~--~~~C~~~~~~~~~~~~~~~~~~~~~lkl~  428 (792)
                      .+.|+.++++++|+..+.. ..+++++|++.||+||+|.||+|.  +++|+.|..++.+..........+|||++
T Consensus        11 ~~~f~~~~~~~~~~~~~~~-~~~s~~~C~~~Cl~nCsC~a~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~yiKv~   84 (84)
T cd01098          11 TDGFLKLPDVKLPDNASAI-TAISLEECREACLSNCSCTAYAYNNGSGGCLLWNGLLNNLRSLSSGGGTLYLRLA   84 (84)
T ss_pred             CCEEEEeCCeeCCCchhhh-ccCCHHHHHHHHhcCCCcceeeecCCCCeEEEEeceecceEeecCCCcEEEEEeC
Confidence            3468899999999876554 678999999999999999999996  47899998888776654444578888874

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and S-locus glycoproteins are involved in sporophytic self-incompatibility response in Brassica, one of probably many molecular mechanisms, by which hermaphrodite flowering plants avoid self-fertilization.

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.13  E-value=5.4e-10  Score=109.34  Aligned_cols=139  Identities=16%  Similarity=0.184  Sum_probs=99.1

Q ss_pred             hhcCccccceEEEeeecCC-----CceEEEEEEccccc----------------------ccchHHHH----HHHHHhcc
Q 003836          507 EELGRGAFGTVYKGFVNMG-----SSNHVAVKKLNSVF----------------------QDSEKEFK----AEVNGIGQ  555 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~-----~~~~vavK~~~~~~----------------------~~~~~~~~----~Ei~~l~~  555 (792)
                      ..||.|.-+.||.|.-..+     .+..+|||+.+...                      ....+.+.    +|.+.|.+
T Consensus         3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r   82 (197)
T cd05146           3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR   82 (197)
T ss_pred             CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence            3689999999999964432     24689999764211                      00122233    89999999


Q ss_pred             cCC--CCcccccceeccCCceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHH-hhccCCCeEecCCCCCc
Q 003836          556 THH--KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYL-HEECCTQIIHCDIKPQN  632 (792)
Q Consensus       556 l~h--~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivH~dikp~N  632 (792)
                      +..  -++.+++++    ...+|||||+.+..+..-.-....++......+..+++.+|..| |..   +|+|+||++.|
T Consensus        83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGDLs~~N  155 (197)
T cd05146          83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHADLSEYN  155 (197)
T ss_pred             HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHH
Confidence            854  456666654    56789999998754433222222344556677889999999999 676   99999999999


Q ss_pred             EEEcCCCCeEEeecCCCcccc
Q 003836          633 ILLDDHYNARISDFGLAKLLT  653 (792)
Q Consensus       633 ILl~~~~~~kl~Dfg~a~~~~  653 (792)
                      ||+++ +.+.|+|||.+....
T Consensus       156 IL~~~-~~v~iIDF~qav~~~  175 (197)
T cd05146         156 MLWHD-GKVWFIDVSQSVEPT  175 (197)
T ss_pred             EEEEC-CcEEEEECCCceeCC
Confidence            99974 679999999987654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.12  E-value=6.6e-11  Score=129.68  Aligned_cols=253  Identities=21%  Similarity=0.205  Sum_probs=182.4

Q ss_pred             HHHHHHhhhhhhcCc--cccceEEEeeec-CCCceEEEEEEcccccc--cchHHHHHHHHHhcccC-CCCcccccceecc
Q 003836          497 ELVEVTRGFKEELGR--GAFGTVYKGFVN-MGSSNHVAVKKLNSVFQ--DSEKEFKAEVNGIGQTH-HKNLVRLLGYCDE  570 (792)
Q Consensus       497 el~~~~~~~~~~lG~--G~~g~Vy~g~~~-~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~-h~niv~l~g~~~~  570 (792)
                      +.+...-++.+.+|.  |.+|.||.+... ..+...+|+|+-+....  ...+.-.+|+....+++ |+|.++.......
T Consensus       110 s~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~  189 (524)
T KOG0601|consen  110 SFFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEG  189 (524)
T ss_pred             chhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCccccc
Confidence            344444556678999  999999998651 23456789998554333  33445567777777774 9999998888899


Q ss_pred             CCceEEEEEeccCCCccccccCCC-CCchhHHHHHHHHHHH----HHHHHhhccCCCeEecCCCCCcEEEcCC-CCeEEe
Q 003836          571 GQNRLLVYEFMSNGTVASFLFGDS-KPNWKLRTEIAMGIAG----GLFYLHEECCTQIIHCDIKPQNILLDDH-YNARIS  644 (792)
Q Consensus       571 ~~~~~lV~E~~~~gsL~~~l~~~~-~l~~~~~~~i~~~ia~----gL~yLH~~~~~~ivH~dikp~NILl~~~-~~~kl~  644 (792)
                      .+..++-.|++. .+|.++.+... .++......+..+...    ||.++|..   .++|-|+||.||++..+ ...++.
T Consensus       190 ~~~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~  265 (524)
T KOG0601|consen  190 SGILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLT  265 (524)
T ss_pred             CCcceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecC
Confidence            999999999986 68888887664 3777888888888888    99999998   99999999999999999 889999


Q ss_pred             ecCCCccccCCCCCc----cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHH
Q 003836          645 DFGLAKLLTLDQSHT----NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAY  720 (792)
Q Consensus       645 Dfg~a~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~  720 (792)
                      |||+...+.......    .....|...|++||...+ .++.+.|||++|.+.++..++-.+.....       ...|.+
T Consensus       266 df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~-------~~~W~~  337 (524)
T KOG0601|consen  266 DFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGK-------NSSWSQ  337 (524)
T ss_pred             CcceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCC-------CCCccc
Confidence            999998776544221    112257778999998754 66889999999999999998876543321       011111


Q ss_pred             HhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          721 DRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ...  ..        +..++...-..++...+.++++.+|..|++.+.+..
T Consensus       338 ~r~--~~--------ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~  378 (524)
T KOG0601|consen  338 LRQ--GY--------IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA  378 (524)
T ss_pred             ccc--cc--------CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence            110  00        011111112234444888899999999998877765

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.11  E-value=1.2e-10  Score=131.20  Aligned_cols=137  Identities=17%  Similarity=0.155  Sum_probs=88.5

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEccccccc----------------------------------chH------HH
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD----------------------------------SEK------EF  546 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~----------------------------------~~~------~~  546 (792)
                      +.||+|++|.||+|++.. +++.||||+++.....                                  -.+      ++
T Consensus       125 ~PlasaSiaQVh~A~l~~-~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~  203 (537)
T PRK04750        125 KPLASASIAQVHFARLKD-NGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDL  203 (537)
T ss_pred             hhhcCCCccEEEEEEECC-CCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCH
Confidence            369999999999998864 3678999998743110                                  011      23


Q ss_pred             HHHHHHhcccC----CCCcccccceecc-CCceEEEEEeccCCCccccc--cCCC----CCchhHHHHHHHHHHHHHHHH
Q 003836          547 KAEVNGIGQTH----HKNLVRLLGYCDE-GQNRLLVYEFMSNGTVASFL--FGDS----KPNWKLRTEIAMGIAGGLFYL  615 (792)
Q Consensus       547 ~~Ei~~l~~l~----h~niv~l~g~~~~-~~~~~lV~E~~~~gsL~~~l--~~~~----~l~~~~~~~i~~~ia~gL~yL  615 (792)
                      .+|+..+.+++    +.+.+.+-.++.+ ....+|||||++|+++.++-  ....    .+.......++.||       
T Consensus       204 ~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi-------  276 (537)
T PRK04750        204 MREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV-------  276 (537)
T ss_pred             HHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-------
Confidence            44444444442    3333333333322 44678999999999997742  2211    12222222233333       


Q ss_pred             hhccCCCeEecCCCCCcEEEcCCC----CeEEeecCCCccccC
Q 003836          616 HEECCTQIIHCDIKPQNILLDDHY----NARISDFGLAKLLTL  654 (792)
Q Consensus       616 H~~~~~~ivH~dikp~NILl~~~~----~~kl~Dfg~a~~~~~  654 (792)
                      +..   +++|+|+||.||+++.++    .+++.|||++..+..
T Consensus       277 f~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        277 FRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             HhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence            334   999999999999999888    999999999987754

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.10  E-value=6.1e-10  Score=123.08  Aligned_cols=165  Identities=15%  Similarity=0.192  Sum_probs=124.2

Q ss_pred             CceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCCCccccccCCCCCchhHHHHHH
Q 003836          526 SSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIA  605 (792)
Q Consensus       526 ~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~  605 (792)
                      .+.+|.|+..+...........+-++.|+.++||||++++.........|||.|.+.  .|..++..   +......-.+
T Consensus        36 ~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~---l~~~~v~~Gl  110 (690)
T KOG1243|consen   36 DGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE---LGKEEVCLGL  110 (690)
T ss_pred             cCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH---hHHHHHHHHH
Confidence            456788888776544445567888899999999999999999999999999999884  45555533   2244555678


Q ss_pred             HHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccccccccCCcccccccccCCCCcccc
Q 003836          606 MGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD  685 (792)
Q Consensus       606 ~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~D  685 (792)
                      .||+.||.|||++|  +++|++|...-|++++.|..||++|.++........ ......--..|..|+.+....  -..|
T Consensus       111 ~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~~~~s~--~s~D  185 (690)
T KOG1243|consen  111 FQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEEIDPSE--WSID  185 (690)
T ss_pred             HHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-ccccchhhhcccChhhcCccc--cchh
Confidence            89999999999874  899999999999999999999999988765432211 111111223466676553322  4579


Q ss_pred             eehHHHHHHHHHhcC
Q 003836          686 VYSYGVLLLEIICLR  700 (792)
Q Consensus       686 V~S~Gv~l~el~tg~  700 (792)
                      .|-||++++|++.|.
T Consensus       186 ~~~Lg~li~el~ng~  200 (690)
T KOG1243|consen  186 SWGLGCLIEELFNGS  200 (690)
T ss_pred             hhhHHHHHHHHhCcc
Confidence            999999999999993

>PF08276 PAN_2: PAN-like domain; InterPro: IPR013227 PAN domains have significant functional versatility fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions []

Probab=99.10  E-value=6.4e-11  Score=94.42  Aligned_cols=56  Identities=25%  Similarity=0.359  Sum_probs=46.5

Q ss_pred             eeeEeccCCCCCCCcccc-cCcCChhhHhhhccCCCccccceecc----CceeecccCCcc
Q 003836          357 YYIEELRNTDWPTSDYEQ-ISPYGKDECVSSCLKDCQCSAAVLRD----DTCWKKKLPLSY  412 (792)
Q Consensus       357 ~~~~~~~~~~~p~~~~~~-~~~~s~~~C~~~Cl~nCsC~A~~~~~----~~C~~~~~~~~~  412 (792)
                      +.|++++++++|+.+... ..++++++|+..||+||||+||+|.+    ++|+.|...|.+
T Consensus         5 d~F~~l~~~~~p~~~~~~~~~~~s~~~C~~~Cl~nCsC~Ayay~~~~~~~~C~lW~~~L~d   65 (66)
T PF08276_consen    5 DGFLKLPNMKLPDFDNAIVDSSVSLEECEKACLSNCSCTAYAYSNLSGGGGCLLWYGDLVD   65 (66)
T ss_pred             CEEEEECCeeCCCCcceeeecCCCHHHHHhhcCCCCCEeeEEeeccCCCCEEEEEcCEeec
Confidence            369999999999975544 25699999999999999999999973    679999776643

These domains contain a hair-pin loop like structure, similar to knottins, but the pattern of disulphide bonds differs

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.02  E-value=2.4e-09  Score=108.79  Aligned_cols=142  Identities=17%  Similarity=0.202  Sum_probs=110.4

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccc-cchHHHHHHHHHhcccCC--CCcccccceeccCC---ceEEEEEe
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHH--KNLVRLLGYCDEGQ---NRLLVYEF  580 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h--~niv~l~g~~~~~~---~~~lV~E~  580 (792)
                      +.|+.|..+.||++....  ++.+++|....... .....+.+|.++++.+++  .++.+++.+..+..   ..++||||
T Consensus         4 ~~l~~G~~n~~~~v~~~~--g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~   81 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGG--GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMER   81 (223)
T ss_pred             eecCCCccceEEEEEecC--CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEE
Confidence            458999999999987643  46799998765332 135678999999999976  44677788776643   56899999


Q ss_pred             ccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhcc-----------------------------------------
Q 003836          581 MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEEC-----------------------------------------  619 (792)
Q Consensus       581 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----------------------------------------  619 (792)
                      +++.++.+.+.. ..++...+..++.+++++|.+||+..                                         
T Consensus        82 i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (223)
T cd05154          82 VDGRVLRDRLLR-PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL  160 (223)
T ss_pred             eCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence            999988887642 35677788888899999999998531                                         


Q ss_pred             ------------CCCeEecCCCCCcEEEcC--CCCeEEeecCCCcc
Q 003836          620 ------------CTQIIHCDIKPQNILLDD--HYNARISDFGLAKL  651 (792)
Q Consensus       620 ------------~~~ivH~dikp~NILl~~--~~~~kl~Dfg~a~~  651 (792)
                                  ...++|+|++|.||+++.  ++.+.|+||+.+..
T Consensus       161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence                        246899999999999998  66789999998864

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.97  E-value=3.6e-09  Score=99.71  Aligned_cols=130  Identities=19%  Similarity=0.278  Sum_probs=103.2

Q ss_pred             hcCccccceEEEeeecCCCceEEEEEE-ccccccc-------chHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          508 ELGRGAFGTVYKGFVNMGSSNHVAVKK-LNSVFQD-------SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       508 ~lG~G~~g~Vy~g~~~~~~~~~vavK~-~~~~~~~-------~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      .+++|+-+.+|.+.+.   +.++++|. +.+....       ....-.+|.+++.+++--.|...+-+..+.+...|+||
T Consensus         3 ~i~~GAEa~i~~~~~~---g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me   79 (204)
T COG3642           3 LIKQGAEAIIYLTDFL---GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME   79 (204)
T ss_pred             hhhCCcceeEEeeecc---CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence            5789999999998553   23455553 3332222       12456789999999987788777778888889999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCcc
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKL  651 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~  651 (792)
                      |+++..|.+.+...       +..++..|-.-+.-||..   +|+|+||.++||++..+. +.++|||++..
T Consensus        80 ~I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642          80 YIEGELLKDALEEA-------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             EeCChhHHHHHHhc-------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence            99999999888654       366777888888899999   999999999999998875 99999999974

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.96  E-value=4e-10  Score=123.57  Aligned_cols=243  Identities=18%  Similarity=0.205  Sum_probs=170.9

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHH--HHHHHHHhccc-CCCCcccccceeccCCceEEEEEec
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE--FKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~--~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +...||.|.|+.|++...+..++..+++|.+.+.......+  -..|+.+...+ .|.++++...........++=-||+
T Consensus       269 ~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~  348 (524)
T KOG0601|consen  269 LVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFC  348 (524)
T ss_pred             eeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhh
Confidence            34579999999999987665566789999887654333222  23455555555 5888888877777777778999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC-CCeEEeecCCCccccCCCCCcc
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH-YNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~-~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +++++...+.-...+++..++++..|++.++.++|+.   .++|+|+||+||++..+ +.-++.|||++..+.....   
T Consensus       349 ~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~---  422 (524)
T KOG0601|consen  349 EGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSSG---  422 (524)
T ss_pred             cCcchhhhhHHHHhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhccccccccccceecc---
Confidence            9999888774445678888999999999999999998   99999999999999886 7889999999875321111   


Q ss_pred             ccccccCCc-ccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          661 TAIRGTKGY-VAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       661 ~~~~gt~~y-~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      .....+..| .+|+......+-.+.|++|||.-+.|.+++..-......-                   ..+....... 
T Consensus       423 ~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~-------------------~~i~~~~~p~-  482 (524)
T KOG0601|consen  423 VFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQS-------------------LTIRSGDTPN-  482 (524)
T ss_pred             cccccccccccchhhccccccccccccccccccccccccCcccCcccccc-------------------eeeecccccC-
Confidence            111123334 3666667788999999999999999999887543221110                   0000000000 


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhc
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE  774 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~  774 (792)
                       .......+..+..-++..++..||.+.++..+.+
T Consensus       483 -~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~  516 (524)
T KOG0601|consen  483 -LPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSE  516 (524)
T ss_pred             -CCchHHhhhhhhhhhcCCccccchhhhhhcccch
Confidence             1111245556666788899999999888776543

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=98.92  E-value=1.3e-08  Score=109.14  Aligned_cols=167  Identities=20%  Similarity=0.263  Sum_probs=128.7

Q ss_pred             cceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceec----cCCceEEEEEeccC-CCccc
Q 003836          514 FGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCD----EGQNRLLVYEFMSN-GTVAS  588 (792)
Q Consensus       514 ~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~----~~~~~~lV~E~~~~-gsL~~  588 (792)
                      -.+.||+... -++..+++|+++............-++.++++.|.|+|++..++.    .+..++|||+|.|+ ++|.+
T Consensus       289 ~~Ttyk~~s~-~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d  367 (655)
T KOG3741|consen  289 SITTYKATSN-VDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD  367 (655)
T ss_pred             cceeEeeeec-cCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence            3578998654 557789999995443333334445578899999999999999886    45578999999986 56766


Q ss_pred             cccCC---------------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCcccc
Q 003836          589 FLFGD---------------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT  653 (792)
Q Consensus       589 ~l~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~  653 (792)
                      ..+..               ...++..++.++.|+..||.++|+.   |+.-+-|.+++||++.+.+++|+..|....+.
T Consensus       368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~  444 (655)
T KOG3741|consen  368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVLQ  444 (655)
T ss_pred             HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeeec
Confidence            55432               2356789999999999999999998   99999999999999999999999999887765


Q ss_pred             CCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcC
Q 003836          654 LDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRN  702 (792)
Q Consensus       654 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p  702 (792)
                      .+....               +   +--.+-|.=.||.+++.|.||...
T Consensus       445 ~d~~~~---------------l---e~~Qq~D~~~lG~ll~aLAt~~~n  475 (655)
T KOG3741|consen  445 EDPTEP---------------L---ESQQQNDLRDLGLLLLALATGTEN  475 (655)
T ss_pred             CCCCcc---------------h---hHHhhhhHHHHHHHHHHHhhcccc
Confidence            443111               1   112467888899999999999654

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.88  E-value=9.2e-09  Score=96.31  Aligned_cols=140  Identities=22%  Similarity=0.278  Sum_probs=106.5

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEE-cccccc-------cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEE
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKK-LNSVFQ-------DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~-~~~~~~-------~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~  578 (792)
                      ..|-+|+-+.|+++.+.   ++...||. +.+..+       -..++..+|++.+.+++--.|....-++.+...-.|+|
T Consensus        13 ~likQGAEArv~~~~~~---Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M   89 (229)
T KOG3087|consen   13 ELIKQGAEARVPRGSFS---GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM   89 (229)
T ss_pred             eeeeccceeeEeeeccC---CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence            46889999999999764   45666664 333222       12456789999999998778877777788888889999


Q ss_pred             EeccC-CCccccccCC-CCCchh-HHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCC---CeEEeecCCCccc
Q 003836          579 EFMSN-GTVASFLFGD-SKPNWK-LRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY---NARISDFGLAKLL  652 (792)
Q Consensus       579 E~~~~-gsL~~~l~~~-~~l~~~-~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~---~~kl~Dfg~a~~~  652 (792)
                      ||+++ .++.+++... ...... ....++.+|-+.+.-||..   +|+|+||..+||+|..++   .+.++|||++...
T Consensus        90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~~s  166 (229)
T KOG3087|consen   90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS  166 (229)
T ss_pred             EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchhcc
Confidence            99987 4677777543 222223 3378889999999999999   999999999999997654   3589999998653

>cd00129 PAN_APPLE PAN/APPLE-like domain; present in N-terminal (N) domains of plasminogen/ hepatocyte growth factor proteins, plasma prekallikrein/coagulation factor XI and microneme antigen proteins, plant receptor-like protein kinases, and various nematode and leech anti-platelet proteins

Probab=98.74  E-value=1e-08  Score=84.37  Aligned_cols=63  Identities=17%  Similarity=0.157  Sum_probs=51.2

Q ss_pred             eEeccCCCCCCCcccccCcCChhhHhhhccC---CCccccceec--cCceeecccCC-ccCccCCCCCCcEEEe
Q 003836          359 IEELRNTDWPTSDYEQISPYGKDECVSSCLK---DCQCSAAVLR--DDTCWKKKLPL-SYGKTDRDETGTTFIK  426 (792)
Q Consensus       359 ~~~~~~~~~p~~~~~~~~~~s~~~C~~~Cl~---nCsC~A~~~~--~~~C~~~~~~~-~~~~~~~~~~~~~~lk  426 (792)
                      |+++.++++|+...     +++++|++.|++   ||||+||+|.  ..+|+.|..++ .+.+...+.+.++|+|
T Consensus        11 fl~~~~~klpd~~~-----~s~~eC~~~Cl~~~~nCsC~Aya~~~~~~gC~~W~~~l~~d~~~~~~~g~~Ly~r   79 (80)
T cd00129          11 TLIKIALKIKTTKA-----NTADECANRCEKNGLPFSCKAFVFAKARKQCLWFPFNSMSGVRKEFSHGFDLYEN   79 (80)
T ss_pred             EEEeecccCCcccc-----cCHHHHHHHHhcCCCCCCceeeeccCCCCCeEEecCcchhhHHhccCCCceeEeE
Confidence            77888899998654     689999999999   9999999995  35799998888 6655555556778875

Common structural features include two disulfide bonds that link the alpha-helix to the central region of the protein. PAN domains have significant functional versatility, fulfilling diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.68  E-value=7.3e-09  Score=119.42  Aligned_cols=192  Identities=20%  Similarity=0.213  Sum_probs=137.8

Q ss_pred             CCCCcccccceeccCCceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEc
Q 003836          557 HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLD  636 (792)
Q Consensus       557 ~h~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~  636 (792)
                      +||-++...--+......+||++|..+++|..-|+.....+.......+..+.+++.|||..   .+.|+|++|.|+|+.
T Consensus       862 ~~P~v~~~~~s~~~rsP~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~  938 (1205)
T KOG0606|consen  862 RSPAVVRSFPSFPCRSPLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIA  938 (1205)
T ss_pred             CCCceecccCCCCCCCCcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccc---hhhcccccccchhhc
Confidence            44555554444556678899999999999999998776555555555666688899999997   699999999999999


Q ss_pred             CCCCeEEeecCCCccccC---------------------CC---------CCccccccccCCcccccccccCCCCcccce
Q 003836          637 DHYNARISDFGLAKLLTL---------------------DQ---------SHTNTAIRGTKGYVAPEWFRNMPITVKVDV  686 (792)
Q Consensus       637 ~~~~~kl~Dfg~a~~~~~---------------------~~---------~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV  686 (792)
                      .++..++.||+.......                     ..         ........+|+.|.+||...+......+|.
T Consensus       939 ~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~ 1018 (1205)
T KOG0606|consen  939 YDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADW 1018 (1205)
T ss_pred             ccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchh
Confidence            999999999983322110                     00         011223468999999999999999999999


Q ss_pred             ehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc-cCCHHHHHHHHHHHHHccccCCCCCCC
Q 003836          687 YSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA-MNNVTMLHRFVMVAFWCIQEDPSHRPT  765 (792)
Q Consensus       687 ~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~Cl~~~p~~RPs  765 (792)
                      |+.|++++|.++|..||.........                +.+....... .-+.+...+..+++...+..+|.+|-.
T Consensus      1019 ~~~g~~l~e~l~g~pp~na~tpq~~f----------------~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~ 1082 (1205)
T KOG0606|consen 1019 WSSGVCLFEVLTGIPPFNAETPQQIF----------------ENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLG 1082 (1205)
T ss_pred             hhhhhhhhhhhcCCCCCCCcchhhhh----------------hccccCCCCCCCCccccChhhhhhhhhhhccCchhccC
Confidence            99999999999999999765432111                0111111111 112334455666777788899999987


Q ss_pred             HH
Q 003836          766 MR  767 (792)
Q Consensus       766 ~~  767 (792)
                      +.
T Consensus      1083 a~ 1084 (1205)
T KOG0606|consen 1083 AK 1084 (1205)
T ss_pred             cc
Confidence            76

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.68  E-value=9.9e-08  Score=98.89  Aligned_cols=130  Identities=12%  Similarity=0.114  Sum_probs=95.4

Q ss_pred             eEEEeeecCCCceEEEEEEccccccc-----------chHHHHHHHHHhcccCCCCc--ccccceecc-----CCceEEE
Q 003836          516 TVYKGFVNMGSSNHVAVKKLNSVFQD-----------SEKEFKAEVNGIGQTHHKNL--VRLLGYCDE-----GQNRLLV  577 (792)
Q Consensus       516 ~Vy~g~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~Ei~~l~~l~h~ni--v~l~g~~~~-----~~~~~lV  577 (792)
                      .|.+..+.   ++.+.||+.......           ....+.+|.+.+.++...+|  ++++++...     ...-+||
T Consensus        37 rvvr~~~~---g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LV  113 (268)
T PRK15123         37 RTLRFELA---GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFII  113 (268)
T ss_pred             eEEEEEEC---CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEE
Confidence            35565443   457999976432211           11247899999999865554  444556543     2346899


Q ss_pred             EEeccCC-CccccccC--CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC-------CCCeEEeecC
Q 003836          578 YEFMSNG-TVASFLFG--DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD-------HYNARISDFG  647 (792)
Q Consensus       578 ~E~~~~g-sL~~~l~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~-------~~~~kl~Dfg  647 (792)
                      +|++++- +|.+++..  ....+...+..++.+++..+.-||+.   +|+|+|++++|||++.       +..+.|+||+
T Consensus       114 te~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~  190 (268)
T PRK15123        114 TEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDLKLSVIDLH  190 (268)
T ss_pred             EeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCceEEEEECC
Confidence            9999986 78888753  23455667789999999999999999   9999999999999985       4679999999


Q ss_pred             CCcc
Q 003836          648 LAKL  651 (792)
Q Consensus       648 ~a~~  651 (792)
                      .++.
T Consensus       191 r~~~  194 (268)
T PRK15123        191 RAQI  194 (268)
T ss_pred             cccc
Confidence            8863

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.65  E-value=1.8e-07  Score=91.37  Aligned_cols=126  Identities=21%  Similarity=0.240  Sum_probs=81.7

Q ss_pred             eEEEeeecCCCceEEEEEEccccc--------------c------------cchHHHHHHHHHhcccCCC--Ccccccce
Q 003836          516 TVYKGFVNMGSSNHVAVKKLNSVF--------------Q------------DSEKEFKAEVNGIGQTHHK--NLVRLLGY  567 (792)
Q Consensus       516 ~Vy~g~~~~~~~~~vavK~~~~~~--------------~------------~~~~~~~~Ei~~l~~l~h~--niv~l~g~  567 (792)
                      .||.|...  ++..+|||+.+...              +            ......++|.+.|.++...  ++.+++.+
T Consensus         1 ~Vy~~~~~--~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~   78 (188)
T PF01163_consen    1 DVYHAIDP--DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY   78 (188)
T ss_dssp             EEEEEEEC--TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE
T ss_pred             CEEEEECC--CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE
Confidence            37888643  45689999764310              0            0123467899999999765  45666655


Q ss_pred             eccCCceEEEEEecc--CCCccccccCCCCCchhHHHHHHHHHHHHHHHH-hhccCCCeEecCCCCCcEEEcCCCCeEEe
Q 003836          568 CDEGQNRLLVYEFMS--NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYL-HEECCTQIIHCDIKPQNILLDDHYNARIS  644 (792)
Q Consensus       568 ~~~~~~~~lV~E~~~--~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivH~dikp~NILl~~~~~~kl~  644 (792)
                      -    ...|||||++  +..+..+...  .++......++.+++..+..+ |..   +|+|+||.+.|||++++ .+.|+
T Consensus        79 ~----~~~ivME~I~~~G~~~~~l~~~--~~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~iI  148 (188)
T PF01163_consen   79 N----RNVIVMEYIGEDGVPLPRLKDV--DLSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVYII  148 (188)
T ss_dssp             E----TTEEEEE--EETTEEGGCHHHC--GGGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEEE-
T ss_pred             e----CCEEEEEecCCCccchhhHHhc--cccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEEEE
Confidence            3    4479999999  5555443321  122456677888888866664 566   99999999999999988 99999


Q ss_pred             ecCCCcccc
Q 003836          645 DFGLAKLLT  653 (792)
Q Consensus       645 Dfg~a~~~~  653 (792)
                      |||.+....
T Consensus       149 Df~qav~~~  157 (188)
T PF01163_consen  149 DFGQAVDSS  157 (188)
T ss_dssp             -GTTEEETT
T ss_pred             ecCcceecC
Confidence            999887543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>smart00108 B_lectin Bulb-type mannose-specific lectin

Probab=98.61  E-value=1.1e-07  Score=85.35  Aligned_cols=76  Identities=22%  Similarity=0.458  Sum_probs=59.4

Q ss_pred             EEEEeCccEEEEcCC-CCEEEEeccCCC--cceeEEEecCCcEEEEecCCccccccccCCcccccCCCccccceEEeeec
Q 003836           91 LRLTANRGLVLEDPE-GREIWKSEISTG--QAAFGVLYDTGNFLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSSRR  167 (792)
Q Consensus        91 l~~~~~G~Lvl~~~~-~~~vWst~~~~~--~~~~a~LldsGNlVl~~~~~~~lWQSFd~PtDtlLpg~~l~~~~~L~S~~  167 (792)
                      +.+..||+||+.+.. +.+||++++...  ....+.|.++|||||++.++.++|+|     +|- +              
T Consensus        24 ~~~q~dgnlV~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~S-----~t~-~--------------   83 (114)
T smart00108       24 LIMQNDYNLILYKSSSRTVVWVANRDNPVSDSCTLTLQSDGNLVLYDGDGRVVWSS-----NTT-G--------------   83 (114)
T ss_pred             cCCCCCEEEEEEECCCCcEEEECCCCCCCCCCEEEEEeCCCCEEEEeCCCCEEEEe-----ccc-C--------------
Confidence            345578999999765 589999998533  23678999999999999989999998     111 1              


Q ss_pred             cCCCCCCCceeEeecCCCceeeee
Q 003836          168 KDTYFSRGRFQFRLLEDGNAVLNT  191 (792)
Q Consensus       168 s~~~~s~G~~~~~~~~~g~~~~~~  191 (792)
                           ..|.+.+.++++|+++++-
T Consensus        84 -----~~~~~~~~L~ddGnlvl~~  102 (114)
T smart00108       84 -----ANGNYVLVLLDDGNLVIYD  102 (114)
T ss_pred             -----CCCceEEEEeCCCCEEEEC
Confidence                 3567889999999998853

>cd00028 B_lectin Bulb-type mannose-specific lectin

Probab=98.58  E-value=1.4e-07  Score=85.00  Aligned_cols=75  Identities=24%  Similarity=0.433  Sum_probs=58.9

Q ss_pred             EEEe-CccEEEEcCC-CCEEEEeccCC--CcceeEEEecCCcEEEEecCCccccccccCCcccccCCCccccceEEeeec
Q 003836           92 RLTA-NRGLVLEDPE-GREIWKSEIST--GQAAFGVLYDTGNFLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSSRR  167 (792)
Q Consensus        92 ~~~~-~G~Lvl~~~~-~~~vWst~~~~--~~~~~a~LldsGNlVl~~~~~~~lWQSFd~PtDtlLpg~~l~~~~~L~S~~  167 (792)
                      .+.. ||+||+++.. +++||++|+..  .....+.|.++|||||.|.++.++|||=-.                     
T Consensus        25 ~~q~~dgnlv~~~~~~~~~vW~snt~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~S~~~---------------------   83 (116)
T cd00028          25 IMQSRDYNLILYKGSSRTVVWVANRDNPSGSSCTLTLQSDGNLVIYDGSGTVVWSSNTT---------------------   83 (116)
T ss_pred             CCCCCeEEEEEEeCCCCeEEEECCCCCCCCCCEEEEEecCCCeEEEcCCCcEEEEeccc---------------------
Confidence            3444 8999998754 58999999864  345678999999999999999999987211                     


Q ss_pred             cCCCCCCCceeEeecCCCceeeee
Q 003836          168 KDTYFSRGRFQFRLLEDGNAVLNT  191 (792)
Q Consensus       168 s~~~~s~G~~~~~~~~~g~~~~~~  191 (792)
                          ...+.+.+.+++||+++++.
T Consensus        84 ----~~~~~~~~~L~ddGnlvl~~  103 (116)
T cd00028          84 ----RVNGNYVLVLLDDGNLVLYD  103 (116)
T ss_pred             ----CCCCceEEEEeCCCCEEEEC
Confidence                02577899999999999864

The domain contains a three-fold internal repeat (beta-prism architecture). The consensus sequence motif QXDXNXVXY is involved in alpha-D-mannose recognition. Lectins are carbohydrate-binding proteins which specifically recognize diverse carbohydrates and mediate a wide variety of biological processes, such as cell-cell and host-pathogen interactions, serum glycoprotein turnover, and innate immune responses.

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.50  E-value=5e-07  Score=90.52  Aligned_cols=108  Identities=19%  Similarity=0.237  Sum_probs=87.8

Q ss_pred             chHHHHHHHHHhcccCCCC--cccccceeccCC----ceEEEEEeccC-CCccccccCCCCCchhHHHHHHHHHHHHHHH
Q 003836          542 SEKEFKAEVNGIGQTHHKN--LVRLLGYCDEGQ----NRLLVYEFMSN-GTVASFLFGDSKPNWKLRTEIAMGIAGGLFY  614 (792)
Q Consensus       542 ~~~~~~~Ei~~l~~l~h~n--iv~l~g~~~~~~----~~~lV~E~~~~-gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~y  614 (792)
                      ......+|...+.+++...  .++.+++.....    ..+||+|++++ .+|.+++......+......++.++++.++-
T Consensus        54 ~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~  133 (206)
T PF06293_consen   54 RRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAK  133 (206)
T ss_pred             cchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHH
Confidence            3457888999888886444  456666665432    35799999998 4799998765557777889999999999999


Q ss_pred             HhhccCCCeEecCCCCCcEEEcCCC---CeEEeecCCCccc
Q 003836          615 LHEECCTQIIHCDIKPQNILLDDHY---NARISDFGLAKLL  652 (792)
Q Consensus       615 LH~~~~~~ivH~dikp~NILl~~~~---~~kl~Dfg~a~~~  652 (792)
                      ||+.   +|+|+|+++.|||++.+.   .+.++||+.++..
T Consensus       134 lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~  171 (206)
T PF06293_consen  134 LHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR  171 (206)
T ss_pred             HHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence            9999   999999999999999887   8999999988753

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.46  E-value=5.7e-08  Score=108.19  Aligned_cols=150  Identities=18%  Similarity=0.255  Sum_probs=102.6

Q ss_pred             HHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc--------cccccccCCccccccccc
Q 003836          606 MGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT--------NTAIRGTKGYVAPEWFRN  677 (792)
Q Consensus       606 ~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~--------~~~~~gt~~y~aPE~~~~  677 (792)
                      .+++.||.|+|..  .++||++|.|++|.++.++..||+.|+.+..........        ..-......|.|||++.+
T Consensus       106 ~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~  183 (700)
T KOG2137|consen  106 GNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG  183 (700)
T ss_pred             hcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence            4456999999987  689999999999999999999999999876554321111        011234567999999999


Q ss_pred             CCCCcccceehHHHHHHHHHhcCcCC-CcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHcc
Q 003836          678 MPITVKVDVYSYGVLLLEIICLRRNI-DNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCI  756 (792)
Q Consensus       678 ~~~~~k~DV~S~Gv~l~el~tg~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl  756 (792)
                      ...+.++|+||+||+++.+..|+.+. .........      .        .....+..-...+..+.+.++.+=+.+.+
T Consensus       184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~------~--------~~~~~~~~~~~~~s~~~p~el~~~l~k~l  249 (700)
T KOG2137|consen  184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSY------S--------FSRNLLNAGAFGYSNNLPSELRESLKKLL  249 (700)
T ss_pred             ccccccccceeeeeEEEEEecCCcchhhccCCcchh------h--------hhhcccccccccccccCcHHHHHHHHHHh
Confidence            88999999999999999999555443 222111000      0        00001111111122345566777777889


Q ss_pred             ccCCCCCCCHHhHHH
Q 003836          757 QEDPSHRPTMRKVTQ  771 (792)
Q Consensus       757 ~~~p~~RPs~~evl~  771 (792)
                      ..++..||++.++..
T Consensus       250 ~~~~~~rp~~~~l~~  264 (700)
T KOG2137|consen  250 NGDSAVRPTLDLLLS  264 (700)
T ss_pred             cCCcccCcchhhhhc
Confidence            999999998877654

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.44  E-value=1.7e-06  Score=86.72  Aligned_cols=135  Identities=17%  Similarity=0.160  Sum_probs=96.1

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc----------------------ccchHHHHHHHHHhcccCCC-
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF----------------------QDSEKEFKAEVNGIGQTHHK-  559 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~----------------------~~~~~~~~~Ei~~l~~l~h~-  559 (792)
                      +.+.++||.|.-|.||.|..+  .+.++|||.=+...                      .......++|.++|.+|.-. 
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~--~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G  170 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDP--KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEG  170 (304)
T ss_pred             HhhccccccCccceEEEEECC--CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcC
Confidence            445678999999999999765  45689998432110                      01123567899999998755 


Q ss_pred             -CcccccceeccCCceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC
Q 003836          560 -NLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH  638 (792)
Q Consensus       560 -niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~  638 (792)
                       .+.+.+++    +...+||||+++-.|...-     ++......|+..|+.-+.-+-..   ||||+|+++=||+++++
T Consensus       171 ~~VP~P~~~----nRHaVvMe~ieG~eL~~~r-----~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~~d  238 (304)
T COG0478         171 VKVPKPIAW----NRHAVVMEYIEGVELYRLR-----LDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVTED  238 (304)
T ss_pred             CCCCCcccc----ccceeeeehcccceeeccc-----CcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEecC
Confidence             67777665    4557999999986665543     13334444555555555544455   99999999999999999


Q ss_pred             CCeEEeecCCCcc
Q 003836          639 YNARISDFGLAKL  651 (792)
Q Consensus       639 ~~~kl~Dfg~a~~  651 (792)
                      |.+.++||--+..
T Consensus       239 g~~~vIDwPQ~v~  251 (304)
T COG0478         239 GDIVVIDWPQAVP  251 (304)
T ss_pred             CCEEEEeCccccc
Confidence            9999999977654

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.42  E-value=5.6e-06  Score=87.04  Aligned_cols=189  Identities=15%  Similarity=0.191  Sum_probs=127.2

Q ss_pred             hhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhccc-CCCCcccccce------eccCC-ceEEE
Q 003836          506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT-HHKNLVRLLGY------CDEGQ-NRLLV  577 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~g~------~~~~~-~~~lV  577 (792)
                      ...||+|+-+.+|-.    +.-...+.|+..........+...|+   ... .||-+-.-+.+      --+.. ..-++
T Consensus        16 gr~LgqGgea~ly~l----~e~~d~VAKIYh~Pppa~~aqk~a~l---a~~p~~p~~~~rvaWPqa~L~G~~~~~~iGfl   88 (637)
T COG4248          16 GRPLGQGGEADLYTL----GEVRDQVAKIYHAPPPAAQAQKVAEL---AATPDAPLLNYRVAWPQATLHGGRRGKVIGFL   88 (637)
T ss_pred             CccccCCccceeeec----chhhchhheeecCCCchHHHHHHHHh---ccCCCCcchhhhhcccHHHhhCCCccceeEEe
Confidence            356999999999953    12233556777765555444444443   333 45543331111      11222 25577


Q ss_pred             EEeccCC-CccccccCC------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCc
Q 003836          578 YEFMSNG-TVASFLFGD------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK  650 (792)
Q Consensus       578 ~E~~~~g-sL~~~l~~~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~  650 (792)
                      |..+++. .+..++.-.      ...+|...++.++.+|.+.+-||..   |.+-+|++++|+|+.+++.+.|.|=..-.
T Consensus        89 mP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDsfq  165 (637)
T COG4248          89 MPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDSFQ  165 (637)
T ss_pred             cccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEccccee
Confidence            7777653 233333211      2468999999999999999999999   99999999999999999999999854433


Q ss_pred             cccCCCCCccccccccCCcccccccc-----cCCCCcccceehHHHHHHHHHhc-CcCCCcc
Q 003836          651 LLTLDQSHTNTAIRGTKGYVAPEWFR-----NMPITVKVDVYSYGVLLLEIICL-RRNIDNE  706 (792)
Q Consensus       651 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~DV~S~Gv~l~el~tg-~~p~~~~  706 (792)
                      ..  .......-.+|...|.+||.-.     +..-+...|-|.|||++++++.| +.||...
T Consensus       166 i~--~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI  225 (637)
T COG4248         166 IN--ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGI  225 (637)
T ss_pred             ec--cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcc
Confidence            22  1122222346888999999754     44567889999999999999987 7788653

>PRK09902 hypothetical protein; Provisional

Probab=98.41  E-value=1.6e-06  Score=85.02  Aligned_cols=136  Identities=16%  Similarity=0.128  Sum_probs=103.8

Q ss_pred             cCccccceEEEeeecCCCceEEEEEEccccc------ccchHHHHHHHHHhcccCCCC--cccccceec-cC----CceE
Q 003836          509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF------QDSEKEFKAEVNGIGQTHHKN--LVRLLGYCD-EG----QNRL  575 (792)
Q Consensus       509 lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~------~~~~~~~~~Ei~~l~~l~h~n--iv~l~g~~~-~~----~~~~  575 (792)
                      -|+||-+.|++-.++   ++.+-+|+-....      +..+..|.+|...|.++...+  +.+++ ++. ..    -.-+
T Consensus        26 ~~rgG~SgV~r~~~~---g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~  101 (216)
T PRK09902         26 YRRNGMSGVQCVERN---GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRAL  101 (216)
T ss_pred             cCCCCcceEEEEEeC---CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEE
Confidence            477999999987554   2368888875321      346788999999999996444  44444 332 11    2357


Q ss_pred             EEEEeccC-CCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCC--eEEeecCCCc
Q 003836          576 LVYEFMSN-GTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYN--ARISDFGLAK  650 (792)
Q Consensus       576 lV~E~~~~-gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~--~kl~Dfg~a~  650 (792)
                      ||+|-+++ -+|.+++...  ...+...+..+..+|++.++-||+.   ++.|+|+.+.|||++.++.  ++++||.-++
T Consensus       102 LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r  178 (216)
T PRK09902        102 LVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR  178 (216)
T ss_pred             EEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence            99997764 5788888654  4567888899999999999999999   9999999999999986667  9999998776


Q ss_pred             c
Q 003836          651 L  651 (792)
Q Consensus       651 ~  651 (792)
                      .
T Consensus       179 ~  179 (216)
T PRK09902        179 R  179 (216)
T ss_pred             h
Confidence            4

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.35  E-value=1.7e-06  Score=97.02  Aligned_cols=140  Identities=19%  Similarity=0.255  Sum_probs=89.4

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccc----------------------------------------hHHH
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS----------------------------------------EKEF  546 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~----------------------------------------~~~~  546 (792)
                      +.|+.++-|.||+|+++.  ++.||||+.+..-...                                        +-++
T Consensus       131 ~PiAsASIaQVH~A~L~s--G~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy  208 (517)
T COG0661         131 EPIASASIAQVHRAVLKS--GEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDY  208 (517)
T ss_pred             CchhhhhHhhheeEEecC--CCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCH
Confidence            358999999999999875  6789999886422111                                        0122


Q ss_pred             HHHHHHhcccC----CCCccccccee-ccCCceEEEEEeccCCCccccccCC-CCCchhHHHHHHHHHHHHH-HHHhhcc
Q 003836          547 KAEVNGIGQTH----HKNLVRLLGYC-DEGQNRLLVYEFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGL-FYLHEEC  619 (792)
Q Consensus       547 ~~Ei~~l~~l~----h~niv~l~g~~-~~~~~~~lV~E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL-~yLH~~~  619 (792)
                      .+|...+.+++    +..-+++=.++ +-.....|+|||++|-.+.+...-+ ...+   +..|+..++++. ..+-.. 
T Consensus       209 ~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d---~k~ia~~~~~~f~~q~~~d-  284 (517)
T COG0661         209 RREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGID---RKELAELLVRAFLRQLLRD-  284 (517)
T ss_pred             HHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhc-
Confidence            33444444431    11112222233 2346779999999999998885222 2333   333443333321 122223 


Q ss_pred             CCCeEecCCCCCcEEEcCCCCeEEeecCCCccccC
Q 003836          620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL  654 (792)
Q Consensus       620 ~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~  654 (792)
                        +++|.|.+|.||+++.++.+.+.|||+...+..
T Consensus       285 --gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~  317 (517)
T COG0661         285 --GFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP  317 (517)
T ss_pred             --CccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence              999999999999999999999999999987654

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.12  E-value=1.5e-05  Score=78.56  Aligned_cols=130  Identities=15%  Similarity=0.146  Sum_probs=82.6

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccchHHH---------HHHHHHhcccCCCCcc---cccce-----ec
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEF---------KAEVNGIGQTHHKNLV---RLLGY-----CD  569 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~---------~~Ei~~l~~l~h~niv---~l~g~-----~~  569 (792)
                      +++-......|.+-..+   +..+++|..+......++.|         .+++..+.+++...+.   .++.+     +.
T Consensus        37 kv~k~~~r~~ValIei~---~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ekk~~~  113 (229)
T PF06176_consen   37 KVFKNTKRNYVALIEID---GKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAEKKIFR  113 (229)
T ss_pred             EeecCCCccEEEEEEEC---CcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeeeeeecc
Confidence            44555555666665433   35688887765443333332         2344444444332222   22222     22


Q ss_pred             cCCceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCC
Q 003836          570 EGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLA  649 (792)
Q Consensus       570 ~~~~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a  649 (792)
                      -....+|||||++|..|.++..    ++.    .++..+.+++.-||+.   |+.|+|.+|+|+++++++ ++++||+..
T Consensus       114 ~~~~~~ll~EYIeG~~l~d~~~----i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgNFlv~~~~-i~iID~~~k  181 (229)
T PF06176_consen  114 YTSSYVLLMEYIEGVELNDIED----IDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGNFLVSNNG-IRIIDTQGK  181 (229)
T ss_pred             ceeEEEEEEEEecCeecccchh----cCH----HHHHHHHHHHHHHHHc---CCccCCCCcCcEEEECCc-EEEEECccc
Confidence            2345679999999988877642    111    3556678889999999   999999999999999665 999999877


Q ss_pred             cc
Q 003836          650 KL  651 (792)
Q Consensus       650 ~~  651 (792)
                      +.
T Consensus       182 ~~  183 (229)
T PF06176_consen  182 RM  183 (229)
T ss_pred             cc
Confidence            64

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.09  E-value=3.8e-05  Score=76.49  Aligned_cols=136  Identities=18%  Similarity=0.214  Sum_probs=90.9

Q ss_pred             hcCccccceEEEeeecCCCceEEEEEEcccccccchH------------------------HHHHHHHHhcccC--CCCc
Q 003836          508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEK------------------------EFKAEVNGIGQTH--HKNL  561 (792)
Q Consensus       508 ~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~------------------------~~~~Ei~~l~~l~--h~ni  561 (792)
                      .|..|.-+.||+|.-  +++..+|||+.+.......+                        -..+|...|.++.  +-.+
T Consensus        55 ~istGKEA~Vy~a~~--~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrv  132 (268)
T COG1718          55 CISTGKEANVYLAET--GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRV  132 (268)
T ss_pred             eecCCcceEEEeecc--CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence            478888999999853  45678999998643211110                        1235666666653  3444


Q ss_pred             ccccceeccCCceEEEEEeccCCCccc-cccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCC
Q 003836          562 VRLLGYCDEGQNRLLVYEFMSNGTVAS-FLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYN  640 (792)
Q Consensus       562 v~l~g~~~~~~~~~lV~E~~~~gsL~~-~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~  640 (792)
                      .+.+++.    +-.|||||+....+.. .|.+ -.+.......+..++.+.+.-|-..  .++||+||+.=|||+. ++.
T Consensus       133 P~Pi~~~----~nVLvMEfIg~~g~pAP~LkD-v~~e~~e~~~~~~~~v~~~~~l~~~--a~LVHgDLSEyNiL~~-~~~  204 (268)
T COG1718         133 PEPIAFR----NNVLVMEFIGDDGLPAPRLKD-VPLELEEAEGLYEDVVEYMRRLYKE--AGLVHGDLSEYNILVH-DGE  204 (268)
T ss_pred             CCceeec----CCeEEEEeccCCCCCCCCccc-CCcCchhHHHHHHHHHHHHHHHHHh--cCcccccchhhheEEE-CCe
Confidence            5555443    3479999997642211 2211 1222335667778888888877774  3999999999999999 889


Q ss_pred             eEEeecCCCcccc
Q 003836          641 ARISDFGLAKLLT  653 (792)
Q Consensus       641 ~kl~Dfg~a~~~~  653 (792)
                      +.|+|++-|....
T Consensus       205 p~iID~~QaV~~~  217 (268)
T COG1718         205 PYIIDVSQAVTID  217 (268)
T ss_pred             EEEEECccccccC
Confidence            9999999987654

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.08  E-value=2.8e-05  Score=78.95  Aligned_cols=133  Identities=18%  Similarity=0.206  Sum_probs=86.0

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCC--cccccceeccCCceEEEEEeccCC
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKN--LVRLLGYCDEGQNRLLVYEFMSNG  584 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~n--iv~l~g~~~~~~~~~lV~E~~~~g  584 (792)
                      +.||+|..+.||+..     +..+++|......  ......+|.++++.+..-.  +.+.+++....+...+|||+++|.
T Consensus         7 ~~i~~G~t~~~y~~~-----~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~   79 (226)
T TIGR02172         7 TQTGEGGNGESYTHK-----TGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGK   79 (226)
T ss_pred             eeecCCCCcceeEec-----CCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCc
Confidence            468999999999841     2357788876432  3456789999999986544  467788887777788999999996


Q ss_pred             C-ccccccCCCCCchhHHHHHHHHHHHH---------------------------------------HHHHhhc-cCCCe
Q 003836          585 T-VASFLFGDSKPNWKLRTEIAMGIAGG---------------------------------------LFYLHEE-CCTQI  623 (792)
Q Consensus       585 s-L~~~l~~~~~l~~~~~~~i~~~ia~g---------------------------------------L~yLH~~-~~~~i  623 (792)
                      + +.+.+..    +......++.++++.                                       ..+|... ....+
T Consensus        80 ~~~~~~~~~----~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~  155 (226)
T TIGR02172        80 RSFSRIISD----NPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTC  155 (226)
T ss_pred             cchhhhhcC----CHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCce
Confidence            3 2211110    000111111111111                                       1222211 12357


Q ss_pred             EecCCCCCcEEEcCCCCeEEeecCCCcc
Q 003836          624 IHCDIKPQNILLDDHYNARISDFGLAKL  651 (792)
Q Consensus       624 vH~dikp~NILl~~~~~~kl~Dfg~a~~  651 (792)
                      +|+|++|.||++++++ +.|+||+.+..
T Consensus       156 ~HgD~~~~Nii~~~~~-~~iIDwe~a~~  182 (226)
T TIGR02172       156 LHGDFQIGNLITSGKG-TYWIDLGDFGY  182 (226)
T ss_pred             EecCCCCCcEEEcCCC-cEEEechhcCc
Confidence            8999999999999988 99999998764

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PF01453 B_lectin: D-mannose binding lectin; InterPro: IPR001480 A bulb lectin super-family (Amaryllidaceae, Orchidaceae and Aliaceae) contains a ~115-residue-long domain whose overall three dimensional fold is very similar to that of [, ]: Dictyostelium discoideum comitin, an actin binding protein Curculigo latifolia curculin, a sweet tasting and taste-modifying protein This domain generally binds mannose, but in at least one protein, curculin, it is apparently devoid of mannose-binding activity

Probab=98.06  E-value=2.7e-05  Score=69.67  Aligned_cols=99  Identities=22%  Similarity=0.364  Sum_probs=66.7

Q ss_pred             ceecCCCeEEEeeeecCCCCceEEEEEeecCCCCcEEEEe-cCCCCCCCCeeEEEEeCccEEEEcCCCCEEEEeccCCCc
Q 003836           40 PWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYA-SAVNPAPRGSKLRLTANRGLVLEDPEGREIWKSEISTGQ  118 (792)
Q Consensus        40 ~lvS~~g~F~lGF~~~~~~~~~~~gIW~~~~~~~tvvWvA-Nr~~P~~~~~~l~~~~~G~Lvl~~~~~~~vWst~~~~~~  118 (792)
                      ++.+.+|.+.|-|...|+-      +.|.  ...+++|.+ +...+......+.|.+||||||+|.++.++|+|. ....
T Consensus        13 p~~~~s~~~~L~l~~dGnL------vl~~--~~~~~iWss~~t~~~~~~~~~~~L~~~GNlvl~d~~~~~lW~Sf-~~pt   83 (114)
T PF01453_consen   13 PLTSSSGNYTLILQSDGNL------VLYD--SNGSVIWSSNNTSGRGNSGCYLVLQDDGNLVLYDSSGNVLWQSF-DYPT   83 (114)
T ss_dssp             EEEECETTEEEEEETTSEE------EEEE--TTTEEEEE--S-TTSS-SSEEEEEETTSEEEEEETTSEEEEEST-TSSS
T ss_pred             ccccccccccceECCCCeE------EEEc--CCCCEEEEecccCCccccCeEEEEeCCCCEEEEeecceEEEeec-CCCc
Confidence            4555458888888876532      2233  235779999 4344433568899999999999999999999994 3345


Q ss_pred             ceeEEEec--CCcEEEEecCCccccccccCCc
Q 003836          119 AAFGVLYD--TGNFLIVNTNSERLWQSFDHPT  148 (792)
Q Consensus       119 ~~~a~Lld--sGNlVl~~~~~~~lWQSFd~Pt  148 (792)
                      .+.+..++  .||++ ......+.|.|=+.|+
T Consensus        84 dt~L~~q~l~~~~~~-~~~~~~~sw~s~~dps  114 (114)
T PF01453_consen   84 DTLLPGQKLGDGNVT-GKNDSLTSWSSNTDPS  114 (114)
T ss_dssp             -EEEEEET--TSEEE-EESTSSEEEESS----
T ss_pred             cEEEeccCcccCCCc-cccceEEeECCCCCCC
Confidence            56667777  89998 7666788998876663

Each bulb-type lectin domain consists of three sequential beta-sheet subdomains (I, II, III) that are inter-related by pseudo three-fold symmetry. The three subdomains are flat four-stranded, antiparrallel beta-sheets. Together they form a 12-stranded beta-barrel in which the barrel axis coincides with the pseudo 3-fold axis.; GO: 0005529 sugar binding; PDB: 3M7H_A 3M7J_B 3MEZ_D 1DLP_A 1BWU_D 1KJ1_A 1B2P_A 1XD6_A 2DPF_C 2D04_B ....

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.03  E-value=1.7e-06  Score=95.54  Aligned_cols=181  Identities=17%  Similarity=0.102  Sum_probs=129.7

Q ss_pred             hhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCC-cccccceeccCCceEEEEEeccCC
Q 003836          506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKN-LVRLLGYCDEGQNRLLVYEFMSNG  584 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~n-iv~l~g~~~~~~~~~lV~E~~~~g  584 (792)
                      -+.+++++++.++|..-. . ++...++.+..     .....-++++|.+++||| .+..++-+..+....++++++..+
T Consensus       247 fh~fvK~altknpKkRpt-a-eklL~h~fvs~-----~l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~  319 (829)
T KOG0576|consen  247 FHNFVKGALTKNPKKRPT-A-EKLLQHPFVSQ-----TLSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTG  319 (829)
T ss_pred             HHHHHHHHhcCCCccCCC-h-hhheeceeecc-----chhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCC
Confidence            355788999999986421 1 22333444432     255667889999999999 777777788888889999999887


Q ss_pred             -C-ccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          585 -T-VASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       585 -s-L~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                       + ..+.....-.+...+...+.+.-+++++|||+.   .=+|+|    ||+..+ ...|..||+.+..+.+..  ....
T Consensus       320 rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~---~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~--~~~t  389 (829)
T KOG0576|consen  320 RSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSS---YKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM--KPRT  389 (829)
T ss_pred             ccccccCChhhHhhhhhhhhhhhhhhcccccccccc---cccCcc----cccccc-cccccccccCCcccCccc--cccc
Confidence             2 222211112233444455666677899999986   457888    777766 588999999988765443  3345


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCC
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNI  703 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~  703 (792)
                      ..+++.++|||......+..+.|+|++|+--.++--|-.|-
T Consensus       390 ~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr  430 (829)
T KOG0576|consen  390 AIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPR  430 (829)
T ss_pred             CCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCC
Confidence            56899999999999999999999999998766776665553

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=97.98  E-value=2.6e-05  Score=76.56  Aligned_cols=102  Identities=22%  Similarity=0.313  Sum_probs=83.4

Q ss_pred             HHHHHHhcccCC-CCcccccceeccCCceEEEEEeccCCCcccc---ccCCCCCchhHHHHHHHHHHHHHHHHhhccCCC
Q 003836          547 KAEVNGIGQTHH-KNLVRLLGYCDEGQNRLLVYEFMSNGTVASF---LFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ  622 (792)
Q Consensus       547 ~~Ei~~l~~l~h-~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~---l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~  622 (792)
                      .+|.-+++.+++ +++++++|+|-    .++|.||...+++...   +..-...+|..|.+||.++++.+.+|++.....
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~   82 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF   82 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence            457778888876 69999999993    4789999998766432   212234689999999999999999999975557


Q ss_pred             eEecCCCCCcEEEcCCCCeEEeecCCCccc
Q 003836          623 IIHCDIKPQNILLDDHYNARISDFGLAKLL  652 (792)
Q Consensus       623 ivH~dikp~NILl~~~~~~kl~Dfg~a~~~  652 (792)
                      +.-+|++++|+-+++++++|+.|...+...
T Consensus        83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~~~  112 (188)
T PF12260_consen   83 FYLCDVSPDNFGVNDDGRLKLIDLDDVFVE  112 (188)
T ss_pred             EEEeecchHHeEEeCCCcEEEEechhcchh
Confidence            888999999999999999999999877543

Proteins in this uncharacterised family are described as transmembrane proteins.

>smart00473 PAN_AP divergent subfamily of APPLE domains

Probab=97.97  E-value=1.4e-05  Score=66.25  Aligned_cols=57  Identities=26%  Similarity=0.443  Sum_probs=44.6

Q ss_pred             eeEeccCCCCCCCcccccCcCChhhHhhhccC-CCccccceec--cCceeecc-cCCccCc
Q 003836          358 YIEELRNTDWPTSDYEQISPYGKDECVSSCLK-DCQCSAAVLR--DDTCWKKK-LPLSYGK  414 (792)
Q Consensus       358 ~~~~~~~~~~p~~~~~~~~~~s~~~C~~~Cl~-nCsC~A~~~~--~~~C~~~~-~~~~~~~  414 (792)
                      .|..++++.+++.........++++|++.|++ +|+|.|+.|.  .+.|++|. .++.+..
T Consensus         5 ~f~~~~~~~l~~~~~~~~~~~s~~~C~~~C~~~~~~C~s~~y~~~~~~C~l~~~~~~~~~~   65 (78)
T smart00473        5 CFVRLPNTKLPGFSRIVISVASLEECASKCLNSNCSCRSFTYNNGTKGCLLWSESSLGDAR   65 (78)
T ss_pred             eeEEecCccCCCCcceeEcCCCHHHHHHHhCCCCCceEEEEEcCCCCEEEEeeCCccccce
Confidence            47888899988554433456799999999999 9999999997  57899887 5554444

Apple-like domains present in Plasminogen, C. elegans hypothetical ORFs and the extracellular portion of plant receptor-like protein kinases. Predicted to possess protein- and/or carbohydrate-binding functions.

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=97.94  E-value=4.5e-05  Score=85.47  Aligned_cols=140  Identities=21%  Similarity=0.260  Sum_probs=89.3

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccc-------------------------------------hHHHHHH
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS-------------------------------------EKEFKAE  549 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~-------------------------------------~~~~~~E  549 (792)
                      +.||.-+.|.||+++++.  ++.||||+-+..-+..                                     +-+|.+|
T Consensus       167 ~piaaASlaQVhrA~L~~--G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~E  244 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKN--GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKE  244 (538)
T ss_pred             chhhhcchhheEEEEecC--CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHH
Confidence            469999999999999875  6789999876432111                                     1134455


Q ss_pred             HHHhccc----CCCCc---cccccee-ccCCceEEEEEeccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccC
Q 003836          550 VNGIGQT----HHKNL---VRLLGYC-DEGQNRLLVYEFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECC  620 (792)
Q Consensus       550 i~~l~~l----~h~ni---v~l~g~~-~~~~~~~lV~E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~  620 (792)
                      .+...+.    .|-++   |.+=.++ .-...+.|+||||+|..+.+.-.-. ..++..   +|+..+.++  |++.--.
T Consensus       245 A~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~gi~~~---~i~~~l~~~--~~~qIf~  319 (538)
T KOG1235|consen  245 AKNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKRGISPH---DILNKLVEA--YLEQIFK  319 (538)
T ss_pred             HHhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHcCCCHH---HHHHHHHHH--HHHHHHh
Confidence            5544443    34441   1122223 2335789999999999888764321 223333   334333333  2222222


Q ss_pred             CCeEecCCCCCcEEEcC----CCCeEEeecCCCcccc
Q 003836          621 TQIIHCDIKPQNILLDD----HYNARISDFGLAKLLT  653 (792)
Q Consensus       621 ~~ivH~dikp~NILl~~----~~~~kl~Dfg~a~~~~  653 (792)
                      .|++|+|=+|.||+++.    ++.+.+-|||+.....
T Consensus       320 ~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is  356 (538)
T KOG1235|consen  320 TGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS  356 (538)
T ss_pred             cCCccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence            48999999999999994    6789999999987654

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=97.88  E-value=8.4e-05  Score=76.72  Aligned_cols=137  Identities=15%  Similarity=0.060  Sum_probs=83.5

Q ss_pred             cCcccc-ceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccC-CCCcccccceeccCCceEEEEEeccCCCc
Q 003836          509 LGRGAF-GTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH-HKNLVRLLGYCDEGQNRLLVYEFMSNGTV  586 (792)
Q Consensus       509 lG~G~~-g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~g~~~~~~~~~lV~E~~~~gsL  586 (792)
                      |-.|.. ..||+....   +..+.||+.....   ..++.+|+++++.+. +--+.+++++....+..++|||+++|.+|
T Consensus         6 ~~~g~~~~~v~~~~~~---~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l   79 (244)
T cd05150           6 VTEGQSGATVYRLDGK---NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPA   79 (244)
T ss_pred             cCCCCCcCeEEEEcCC---CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccH
Confidence            444444 789997532   2578888876542   345778888888874 44466777777766678999999999887


Q ss_pred             ccccc-------------------CCC----CCc--hhHHHHHH-HH-------------------HHHHHHHHhhc---
Q 003836          587 ASFLF-------------------GDS----KPN--WKLRTEIA-MG-------------------IAGGLFYLHEE---  618 (792)
Q Consensus       587 ~~~l~-------------------~~~----~l~--~~~~~~i~-~~-------------------ia~gL~yLH~~---  618 (792)
                      .....                   .-.    ...  ...+.... ..                   +...+..|-..   
T Consensus        80 ~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  159 (244)
T cd05150          80 AALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPA  159 (244)
T ss_pred             hHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCC
Confidence            64421                   000    000  00000000 00                   11111122111   


Q ss_pred             -cCCCeEecCCCCCcEEEcCCCCeEEeecCCCcc
Q 003836          619 -CCTQIIHCDIKPQNILLDDHYNARISDFGLAKL  651 (792)
Q Consensus       619 -~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~  651 (792)
                       ..+.++|+|+.|.|||++++....|+||+.+..
T Consensus       160 ~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~  193 (244)
T cd05150         160 EEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLGV  193 (244)
T ss_pred             cCceEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence             124699999999999999987789999998753

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=97.79  E-value=7.3e-05  Score=76.30  Aligned_cols=140  Identities=20%  Similarity=0.179  Sum_probs=81.9

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCC--cccccceecc---CCceEEEEEec
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKN--LVRLLGYCDE---GQNRLLVYEFM  581 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~n--iv~l~g~~~~---~~~~~lV~E~~  581 (792)
                      +.|+.|..+.||+.....   ..+++|.....  .....+.+|..+++.+....  +.+++.+...   ....+++|+++
T Consensus         3 ~~l~~G~~n~~~~v~~~~---~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i   77 (239)
T PF01636_consen    3 RPLSGGFSNRVYRVTTDD---GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYI   77 (239)
T ss_dssp             EEEEESSSSEEEEEEETT---SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEE
T ss_pred             ccCCCCCeeeEEEEEECC---cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEe
Confidence            458889999999986543   47999997654  45577889999988885443  4566664422   23468999999


Q ss_pred             cCCCccc----------------ccc---CC----CCCch-h--------HHHHH------------HHHHHH-HHHHHh
Q 003836          582 SNGTVAS----------------FLF---GD----SKPNW-K--------LRTEI------------AMGIAG-GLFYLH  616 (792)
Q Consensus       582 ~~gsL~~----------------~l~---~~----~~l~~-~--------~~~~i------------~~~ia~-gL~yLH  616 (792)
                      ++..+..                .+.   ..    ..... .        .....            ...+.+ .+..++
T Consensus        78 ~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (239)
T PF01636_consen   78 PGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELE  157 (239)
T ss_dssp             SSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHH
Confidence            9988777                110   00    00000 0        00000            111222 233333


Q ss_pred             hc----cCCCeEecCCCCCcEEEc-CCCCeEEeecCCCcc
Q 003836          617 EE----CCTQIIHCDIKPQNILLD-DHYNARISDFGLAKL  651 (792)
Q Consensus       617 ~~----~~~~ivH~dikp~NILl~-~~~~~kl~Dfg~a~~  651 (792)
                      +.    ....++|+|+.|.|||++ +++.+-|+||+.+..
T Consensus       158 ~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~  197 (239)
T PF01636_consen  158 ALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW  197 (239)
T ss_dssp             HHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred             hhhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence            22    234799999999999999 556668999988753

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.71  E-value=0.00016  Score=68.12  Aligned_cols=128  Identities=18%  Similarity=0.272  Sum_probs=86.5

Q ss_pred             hhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCccc-ccceeccCCceEEEEEeccCC
Q 003836          506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVR-LLGYCDEGQNRLLVYEFMSNG  584 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~-l~g~~~~~~~~~lV~E~~~~g  584 (792)
                      .+.|++|.+|.||+|.+.   +..+|+|+-+.  ......++.|+++|..+.-.++-+ ++.|-.    ..+.|||+.|-
T Consensus        27 ~~~L~KG~~s~Vyl~~~~---~~~~a~Kvrr~--ds~r~~l~kEakiLeil~g~~~~p~vy~yg~----~~i~me~i~G~   97 (201)
T COG2112          27 EKELAKGTTSVVYLGEWR---GGEVALKVRRR--DSPRRNLEKEAKILEILAGEGVTPEVYFYGE----DFIRMEYIDGR   97 (201)
T ss_pred             hhhhhcccccEEEEeecc---CceEEEEEecC--CcchhhHHHHHHHHHHhhhcCCCceEEEech----hhhhhhhhcCc
Confidence            467999999999999765   34788888654  344678999999999988777644 333322    23459999987


Q ss_pred             CccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCC-CCcEEEcCCCCeEEeecCCCccc
Q 003836          585 TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIK-PQNILLDDHYNARISDFGLAKLL  652 (792)
Q Consensus       585 sL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dik-p~NILl~~~~~~kl~Dfg~a~~~  652 (792)
                      +|.+.-...   +..+..    .++.. +|.-+.  .||-|+.|+ |..++|-.+..+.|+||.-|+..
T Consensus        98 ~L~~~~~~~---~rk~l~----~vlE~-a~~LD~--~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~k  156 (201)
T COG2112          98 PLGKLEIGG---DRKHLL----RVLEK-AYKLDR--LGIEHGELSRPWKNVLVNDRDVYIIDFDSATFK  156 (201)
T ss_pred             chhhhhhcc---cHHHHH----HHHHH-HHHHHH--hccchhhhcCCceeEEecCCcEEEEEccchhhc
Confidence            777655321   222333    33343 333332  389999887 55555555559999999999743

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=97.62  E-value=0.00041  Score=71.13  Aligned_cols=75  Identities=13%  Similarity=0.221  Sum_probs=46.5

Q ss_pred             hhcCccccc-eEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCC---CcccccceeccCC---ceEEEEE
Q 003836          507 EELGRGAFG-TVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHK---NLVRLLGYCDEGQ---NRLLVYE  579 (792)
Q Consensus       507 ~~lG~G~~g-~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~---niv~l~g~~~~~~---~~~lV~E  579 (792)
                      +.|+.|+.. .||+.  .    ..+++|..+.  ......+.+|.++++.+...   -+.++++.....+   ..++|||
T Consensus         3 ~~~~~gG~~n~vy~~--~----~~~VlR~~~~--~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~   74 (235)
T cd05155           3 EPVDSGGTDNATFRL--G----DDMSVRLPSA--AGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYR   74 (235)
T ss_pred             eeccCCCcccceEEc--C----CceEEEcCCc--cchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEE
Confidence            346766665 58874  1    2466776543  22345789999999887532   3444444443322   3478999


Q ss_pred             eccCCCcccc
Q 003836          580 FMSNGTVASF  589 (792)
Q Consensus       580 ~~~~gsL~~~  589 (792)
                      +++|.++.+.
T Consensus        75 ~i~G~~l~~~   84 (235)
T cd05155          75 WLEGETATAA   84 (235)
T ss_pred             eecCCCCCcc
Confidence            9999887543

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PLN02876 acyl-CoA dehydrogenase

Probab=97.58  E-value=0.00068  Score=82.41  Aligned_cols=81  Identities=12%  Similarity=0.240  Sum_probs=56.8

Q ss_pred             hhcCccccceEEEeeecCCC-ceEEEEEEccccc-ccchHHHHHHHHHhcccC-CCCc--ccccceeccC---CceEEEE
Q 003836          507 EELGRGAFGTVYKGFVNMGS-SNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTH-HKNL--VRLLGYCDEG---QNRLLVY  578 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~-~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~-h~ni--v~l~g~~~~~---~~~~lV~  578 (792)
                      +.++.|.+..+|+.....+. ...+++|+..... ......+.+|.++++.+. |.++  .+++.+|.+.   ...++||
T Consensus        44 ~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVM  123 (822)
T PLN02876         44 SQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIM  123 (822)
T ss_pred             EEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEE
Confidence            45889999999987654322 1357777754322 123457889999999995 6665  7788888664   4578999


Q ss_pred             EeccCCCcc
Q 003836          579 EFMSNGTVA  587 (792)
Q Consensus       579 E~~~~gsL~  587 (792)
                      ||+++..+.
T Consensus       124 E~v~G~~~~  132 (822)
T PLN02876        124 EYLEGRIFV  132 (822)
T ss_pred             EecCCcccC
Confidence            999986543

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.54  E-value=0.00061  Score=67.20  Aligned_cols=127  Identities=17%  Similarity=0.268  Sum_probs=88.2

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEccccc----------------ccchHHHHHHHHHhcccC------CCCcccc
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF----------------QDSEKEFKAEVNGIGQTH------HKNLVRL  564 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~Ei~~l~~l~------h~niv~l  564 (792)
                      ..||+|+.-.||.  ++.+  ....||+.....                ....++..+|+.-..++.      +..|.++
T Consensus         7 ~~i~~G~~R~cy~--HP~d--p~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~   82 (199)
T PF10707_consen    7 DLIAQGGERDCYQ--HPDD--PNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF   82 (199)
T ss_pred             cccccCCCceEEE--CCCC--CCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence            4699999999997  3333  357888876544                123466777777666555      8889999


Q ss_pred             cceeccCCceEEEEEeccC--C----CccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC
Q 003836          565 LGYCDEGQNRLLVYEFMSN--G----TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH  638 (792)
Q Consensus       565 ~g~~~~~~~~~lV~E~~~~--g----sL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~  638 (792)
                      +|+.+.+...-+|+|.+.+  |    +|.+++... .++.    .+...+-+-..||-+.   .|+.+|++|.||++...
T Consensus        83 ~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~-~~~~----~~~~~L~~f~~~l~~~---~Iv~~dl~~~NIv~~~~  154 (199)
T PF10707_consen   83 YGFVETNLGLGLVVELIRDADGNISPTLEDYLKEG-GLTE----ELRQALDEFKRYLLDH---HIVIRDLNPHNIVVQRR  154 (199)
T ss_pred             eEEEecCCceEEEEEEEECCCCCcCccHHHHHHcC-CccH----HHHHHHHHHHHHHHHc---CCeecCCCcccEEEEec
Confidence            9999999999999998864  2    355566332 2333    2223333344577776   89999999999999633


Q ss_pred             --C--CeEEee
Q 003836          639 --Y--NARISD  645 (792)
Q Consensus       639 --~--~~kl~D  645 (792)
                        +  .+.|+|
T Consensus       155 ~~~~~~lvlID  165 (199)
T PF10707_consen  155 DSGEFRLVLID  165 (199)
T ss_pred             CCCceEEEEEe
Confidence              2  577777

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.41  E-value=0.00094  Score=65.30  Aligned_cols=133  Identities=26%  Similarity=0.364  Sum_probs=92.8

Q ss_pred             ccccCHHHHHHHHhhhhhhcCcccc-ceEEEeeecCCCceEEEEEEcccc-----------cc----------cchHHHH
Q 003836          490 LRCFTYKELVEVTRGFKEELGRGAF-GTVYKGFVNMGSSNHVAVKKLNSV-----------FQ----------DSEKEFK  547 (792)
Q Consensus       490 ~~~~~~~el~~~~~~~~~~lG~G~~-g~Vy~g~~~~~~~~~vavK~~~~~-----------~~----------~~~~~~~  547 (792)
                      ++.|+...   ....|.+.||.|.- |.|||+.+.   ++.+|+|.+...           ..          .....|.
T Consensus        29 L~~F~~h~---~~I~flefLg~g~~~~~V~kv~I~---g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~  102 (207)
T PF13095_consen   29 LEPFTHHG---DDIEFLEFLGHGSHDGYVFKVEID---GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFN  102 (207)
T ss_pred             cCCcCCCC---CcEeeeeecCCCCceeEEEEEEEC---CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHH
Confidence            44555522   44456788999999 999999875   568999993220           00          1123688


Q ss_pred             HHHHHhcccC---CCCc--ccccceeccC------------------CceEEEEEeccCCCccccccCCCCCchhHHHHH
Q 003836          548 AEVNGIGQTH---HKNL--VRLLGYCDEG------------------QNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI  604 (792)
Q Consensus       548 ~Ei~~l~~l~---h~ni--v~l~g~~~~~------------------~~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i  604 (792)
                      .|.+.+.+|+   +.++  |+++||..-.                  ..+.||.||++...             ....+-
T Consensus       103 ~ECRAfgRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-------------~~~~~~  169 (207)
T PF13095_consen  103 CECRAFGRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-------------PLQIRD  169 (207)
T ss_pred             HHHHhhHHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-------------ccchhH
Confidence            9999999885   4456  9999987211                  12357888776532             223344


Q ss_pred             HHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCC
Q 003836          605 AMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLA  649 (792)
Q Consensus       605 ~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a  649 (792)
                      +.+|.+-|..+|..   +|+-+|+++.|..     .-||+|||.+
T Consensus       170 ~~~~~~dl~~~~k~---gI~~~Dv~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  170 IPQMLRDLKILHKL---GIVPRDVKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             HHHHHHHHHHHHHC---CeeeccCcccccc-----CCEEEecccC
Confidence            56677788889998   9999999999986     5689999864

>PRK10593 hypothetical protein; Provisional

Probab=97.39  E-value=0.0019  Score=68.51  Aligned_cols=75  Identities=9%  Similarity=0.089  Sum_probs=53.8

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCC---CCcccccceeccC---CceEEEEEe
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHH---KNLVRLLGYCDEG---QNRLLVYEF  580 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h---~niv~l~g~~~~~---~~~~lV~E~  580 (792)
                      +.||.|..+.||+....  ++ .+.+|..+.  ......+.+|.+.++.+..   ..+.+++++|..+   +..+||||+
T Consensus        20 ~~i~~G~~~~vy~~~~~--~~-~~~~k~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~   94 (297)
T PRK10593         20 ECISEQPYAALWALYDS--QG-NPMPLMARS--FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLER   94 (297)
T ss_pred             eecCCccceeEEEEEcC--CC-CEEEEEecc--cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEec
Confidence            46999999999986432  22 466666432  1133588999999988853   4678888887543   568999999


Q ss_pred             ccCCCc
Q 003836          581 MSNGTV  586 (792)
Q Consensus       581 ~~~gsL  586 (792)
                      ++++++
T Consensus        95 i~G~~~  100 (297)
T PRK10593         95 LRGVSV  100 (297)
T ss_pred             cCCEec
Confidence            998765

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.32  E-value=0.0014  Score=67.20  Aligned_cols=76  Identities=16%  Similarity=0.153  Sum_probs=47.1

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCc-ccccceeccCCceEEEEEeccCCC
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL-VRLLGYCDEGQNRLLVYEFMSNGT  585 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~ni-v~l~g~~~~~~~~~lV~E~~~~gs  585 (792)
                      +.|..|-...+|+.....++.+.+++|+..... .......+|+.++..+...++ +++++.+.    ..+||||+++.+
T Consensus         4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~-~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~G~~   78 (235)
T cd05157           4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKT-ELIIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIPGRT   78 (235)
T ss_pred             EEcCCcccceEEEEEcCCCCCCeEEEEEccCCc-cceecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeCCCc
Confidence            346777788999875432124578888765432 222234578888888854444 44444433    247999999977


Q ss_pred             cc
Q 003836          586 VA  587 (792)
Q Consensus       586 L~  587 (792)
                      +.
T Consensus        79 l~   80 (235)
T cd05157          79 LE   80 (235)
T ss_pred             CC
Confidence            64

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>TIGR02721 ycfN_thiK thiamine kinase

Probab=97.30  E-value=0.0015  Score=67.91  Aligned_cols=135  Identities=12%  Similarity=0.082  Sum_probs=76.8

Q ss_pred             cCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCc-ccccceeccCCceEEEEEeccCCCcc
Q 003836          509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL-VRLLGYCDEGQNRLLVYEFMSNGTVA  587 (792)
Q Consensus       509 lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~ni-v~l~g~~~~~~~~~lV~E~~~~gsL~  587 (792)
                      +..|-...+|+...   +++.+++|..........-...+|.++++.+....+ .+++....    ..+||||++|..+.
T Consensus         4 ~~~G~tn~~y~~~~---~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~~~   76 (256)
T TIGR02721         4 LSGGLTNRSWRIEH---PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEVIT   76 (256)
T ss_pred             CCCcCcCCeEEEEe---CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCcccc
Confidence            55677789998752   345688887654322211245778888888864444 34444432    36899999987765


Q ss_pred             cc-----------------ccCCC----CCchhHH-HHHHHHH---------HHHHHHHhhc-----cCCCeEecCCCCC
Q 003836          588 SF-----------------LFGDS----KPNWKLR-TEIAMGI---------AGGLFYLHEE-----CCTQIIHCDIKPQ  631 (792)
Q Consensus       588 ~~-----------------l~~~~----~l~~~~~-~~i~~~i---------a~gL~yLH~~-----~~~~ivH~dikp~  631 (792)
                      .-                 |+...    ..+...+ .....++         .+.+..+...     ....++|+|+.|.
T Consensus        77 ~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~  156 (256)
T TIGR02721        77 LDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAY  156 (256)
T ss_pred             cccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcC
Confidence            32                 11111    1111111 1111111         1111112111     1236899999999


Q ss_pred             cEEEcCCCCeEEeecCCCcc
Q 003836          632 NILLDDHYNARISDFGLAKL  651 (792)
Q Consensus       632 NILl~~~~~~kl~Dfg~a~~  651 (792)
                      ||++++++ +.|+||..+..
T Consensus       157 Nil~~~~~-~~lIDwE~a~~  175 (256)
T TIGR02721       157 NLVVTPQG-LKLIDWEYASD  175 (256)
T ss_pred             cEEEeCCC-CEEEeccccCc
Confidence            99999877 78999998864

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>cd01100 APPLE_Factor_XI_like Subfamily of PAN/APPLE-like domains; present in plasma prekallikrein/coagulation factor XI, microneme antigen proteins, and a few prokaryotic proteins

Probab=97.28  E-value=0.00023  Score=58.13  Aligned_cols=47  Identities=21%  Similarity=0.438  Sum_probs=36.7

Q ss_pred             ccCCCCCCCcccccCcCChhhHhhhccCCCccccceec--cCceeeccc
Q 003836          362 LRNTDWPTSDYEQISPYGKDECVSSCLKDCQCSAAVLR--DDTCWKKKL  408 (792)
Q Consensus       362 ~~~~~~p~~~~~~~~~~s~~~C~~~Cl~nCsC~A~~~~--~~~C~~~~~  408 (792)
                      ++++++++.++......+.++|+..|+.+|+|.||.|.  .+.|+++..
T Consensus         9 ~~~~~~~g~d~~~~~~~s~~~Cq~~C~~~~~C~afT~~~~~~~C~lk~~   57 (73)
T cd01100           9 GSNVDFRGGDLSTVFASSAEQCQAACTADPGCLAFTYNTKSKKCFLKSS   57 (73)
T ss_pred             cCCCccccCCcceeecCCHHHHHHHcCCCCCceEEEEECCCCeEEcccC
Confidence            35666666555544456899999999999999999995  467998765

PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions.

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=97.17  E-value=0.00096  Score=79.28  Aligned_cols=197  Identities=18%  Similarity=0.146  Sum_probs=136.3

Q ss_pred             HHHHHHHHhcccCCCCcccccceeccCCceE----EEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccC
Q 003836          545 EFKAEVNGIGQTHHKNLVRLLGYCDEGQNRL----LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECC  620 (792)
Q Consensus       545 ~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~----lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~  620 (792)
                      ..+-|+..+.++.|+|++.++.|-.+....-    +.-|++..-++...+..-...+....+.+..+...||+|+|+.  
T Consensus       228 ~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~--  305 (1351)
T KOG1035|consen  228 TTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSL--  305 (1351)
T ss_pred             HHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHh--
Confidence            3455777888899999999999886655433    3457788888888887777888899999999999999999998  


Q ss_pred             CCeEecCCCCC---cEEEcCCCCeEEe--ecCCCccccCCCCCccccccccCCcccccccccCCCC--cccceehHHHHH
Q 003836          621 TQIIHCDIKPQ---NILLDDHYNARIS--DFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT--VKVDVYSYGVLL  693 (792)
Q Consensus       621 ~~ivH~dikp~---NILl~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~--~k~DV~S~Gv~l  693 (792)
                       ...|.-+..+   +--.+.++...++  ||+..+.+.......  ....+..+.+||......++  ...|+|.+|..+
T Consensus       306 -~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~--~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~  382 (1351)
T KOG1035|consen  306 -SLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSF--SDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLL  382 (1351)
T ss_pred             -ccceeEEecccccccccCccceeecchhhhcccccCCCcccch--hhcCccccccccccccccchhhhhhHHHHHHHHH
Confidence             5555444444   4455666777777  888887664332221  12235567788877665544  458999999999


Q ss_pred             HHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHh
Q 003836          694 LEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQML  773 (792)
Q Consensus       694 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L  773 (792)
                      ..+..|..+-.....                   ...+++...        ...+.+....|+..++++|++..+++...
T Consensus       383 ~~~~~~~~i~~~~~~-------------------~~~~l~~~~--------~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~  435 (1351)
T KOG1035|consen  383 LQLSQGEDISEKSAV-------------------PVSLLDVLS--------TSELLDALPKCLDEDSEERLSALELLTHP  435 (1351)
T ss_pred             hhhhhcCcccccccc-------------------hhhhhcccc--------chhhhhhhhhhcchhhhhccchhhhhhch
Confidence            999988764321110                   011111100        01455667789999999999999999865

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.17  E-value=0.0017  Score=69.05  Aligned_cols=139  Identities=17%  Similarity=0.147  Sum_probs=84.7

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCC--ccccccee------ccCCceEEEE
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKN--LVRLLGYC------DEGQNRLLVY  578 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~n--iv~l~g~~------~~~~~~~lV~  578 (792)
                      +.|..|....+|+...+   +..+++|+...   .....+..|++++..+++.+  +.+++...      ...+..++|+
T Consensus        20 ~~i~~G~~n~~y~v~~~---~~~~vLr~~~~---~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~   93 (296)
T cd05153          20 EGISAGIENTNYFVTTD---SGRYVLTLFEK---VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALV   93 (296)
T ss_pred             ecccCccccceEEEEeC---CCcEEEEEcCC---CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEE
Confidence            35777888899987543   23688888764   23456777888888875433  44544421      2234568999


Q ss_pred             EeccCCCcccc----c----------cC---C---C-----CCchhHHH----------HHHHHHHHHHHHHhh----cc
Q 003836          579 EFMSNGTVASF----L----------FG---D---S-----KPNWKLRT----------EIAMGIAGGLFYLHE----EC  619 (792)
Q Consensus       579 E~~~~gsL~~~----l----------~~---~---~-----~l~~~~~~----------~i~~~ia~gL~yLH~----~~  619 (792)
                      +|++|..+...    +          +.   .   .     ...|....          .....+..++.++..    ..
T Consensus        94 ~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~  173 (296)
T cd05153          94 EFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDL  173 (296)
T ss_pred             EeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcC
Confidence            99999776431    0          00   0   0     01111110          011123344455543    12


Q ss_pred             CCCeEecCCCCCcEEEcCCCCeEEeecCCCcc
Q 003836          620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKL  651 (792)
Q Consensus       620 ~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~  651 (792)
                      ..+++|+|++|.|||++++..+.|+||+.+..
T Consensus       174 ~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~  205 (296)
T cd05153         174 PRGVIHADLFRDNVLFDGDELSGVIDFYFACT  205 (296)
T ss_pred             CCcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence            34799999999999999987789999988753

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=97.16  E-value=0.0036  Score=68.60  Aligned_cols=76  Identities=17%  Similarity=0.220  Sum_probs=51.8

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEccccc-------ccchHHHHHHHHHhcccC---CCCcccccceeccCCceEE
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-------QDSEKEFKAEVNGIGQTH---HKNLVRLLGYCDEGQNRLL  576 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-------~~~~~~~~~Ei~~l~~l~---h~niv~l~g~~~~~~~~~l  576 (792)
                      +.||.|.+..||++....+ ++.++||.-....       ....+.+..|.+.|+.+.   -..+++++.+  +.+..++
T Consensus        32 ~elggGn~N~VyrV~~~~g-~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~l  108 (401)
T PRK09550         32 REIGDGNLNLVFRVSDTEG-GKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVT  108 (401)
T ss_pred             eEcCCCceEEEEEEEeCCC-CeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEE
Confidence            4699999999999976432 2579999854211       223456777888877763   2456667766  3355789


Q ss_pred             EEEeccCCC
Q 003836          577 VYEFMSNGT  585 (792)
Q Consensus       577 V~E~~~~gs  585 (792)
                      ||||+++..
T Consensus       109 VME~L~~~~  117 (401)
T PRK09550        109 VMEDLSDHK  117 (401)
T ss_pred             EEecCCCcc
Confidence            999998643

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=96.76  E-value=0.013  Score=62.58  Aligned_cols=139  Identities=14%  Similarity=0.196  Sum_probs=81.1

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCC--ccccccee------ccCCceEEEE
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKN--LVRLLGYC------DEGQNRLLVY  578 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~n--iv~l~g~~------~~~~~~~lV~  578 (792)
                      +.++.|....+|+...+  .+ .+++|+.....  ...+...|++++..|....  +.+++...      ...+..++++
T Consensus        28 ~~~~~G~~n~~y~v~t~--~~-~~vLK~~~~~~--~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~  102 (307)
T TIGR00938        28 KGIAEGVENSNYLLTTD--VG-RYILTLYEKRV--KAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLV  102 (307)
T ss_pred             cccCCccccceEEEEeC--CC-cEEEEEecCCC--CHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEE
Confidence            34677777899987533  22 57788765421  2345566777777764322  34444422      2234568999


Q ss_pred             EeccCCCcccc--------------ccCC-CC-----------CchhHHH------------HHHHHHHHHHHHHhh---
Q 003836          579 EFMSNGTVASF--------------LFGD-SK-----------PNWKLRT------------EIAMGIAGGLFYLHE---  617 (792)
Q Consensus       579 E~~~~gsL~~~--------------l~~~-~~-----------l~~~~~~------------~i~~~ia~gL~yLH~---  617 (792)
                      ||++|..+...              ++.. ..           ..|....            .....+.+.++++..   
T Consensus       103 e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~  182 (307)
T TIGR00938       103 EFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWP  182 (307)
T ss_pred             EeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhh
Confidence            99998665321              1110 00           0111100            011123345555543   


Q ss_pred             -ccCCCeEecCCCCCcEEEcCCCCeEEeecCCCc
Q 003836          618 -ECCTQIIHCDIKPQNILLDDHYNARISDFGLAK  650 (792)
Q Consensus       618 -~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~  650 (792)
                       ....+++|+|+++.||++++++...|+||+.+.
T Consensus       183 ~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       183 RDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             hcCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence             224589999999999999998877899999875

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PRK05231 homoserine kinase; Provisional

Probab=96.74  E-value=0.012  Score=63.28  Aligned_cols=138  Identities=10%  Similarity=0.098  Sum_probs=75.8

Q ss_pred             hcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCC--cccccce------eccCCceEEEEE
Q 003836          508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKN--LVRLLGY------CDEGQNRLLVYE  579 (792)
Q Consensus       508 ~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~n--iv~l~g~------~~~~~~~~lV~E  579 (792)
                      .|..|....+|+.....   ..+++|+...   ...+....|+.+++.|...+  +.+.+..      ....+..++++|
T Consensus        29 ~l~~G~~n~~y~v~t~~---g~~vLK~~~~---~~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~  102 (319)
T PRK05231         29 GIAEGIENSNFFLTTTQ---GEYVLTLFER---LTAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVT  102 (319)
T ss_pred             hhccccccceEEEEeCC---CcEEEEEecc---CChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEE
Confidence            46777778999875432   2588888752   12344445566665553222  3333321      122445789999


Q ss_pred             eccCCCcccc----c----------cCC-C----------CCch-hHHHH------------HHHH-HHHHHHHHhh---
Q 003836          580 FMSNGTVASF----L----------FGD-S----------KPNW-KLRTE------------IAMG-IAGGLFYLHE---  617 (792)
Q Consensus       580 ~~~~gsL~~~----l----------~~~-~----------~l~~-~~~~~------------i~~~-ia~gL~yLH~---  617 (792)
                      |++|..+...    .          +.. .          .+.| .....            ...+ +...+..+..   
T Consensus       103 ~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  182 (319)
T PRK05231        103 FLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLAFLASAAW  182 (319)
T ss_pred             ecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhhhcccc
Confidence            9999765321    0          100 0          0111 11111            0111 1112223321   


Q ss_pred             -ccCCCeEecCCCCCcEEEcCCCCeEEeecCCCcc
Q 003836          618 -ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKL  651 (792)
Q Consensus       618 -~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~  651 (792)
                       ....+++|+|++|.|||++++...-|+||+.+..
T Consensus       183 ~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~  217 (319)
T PRK05231        183 PALPRGVIHADLFRDNVLFEGDRLSGFIDFYFACN  217 (319)
T ss_pred             ccCCcccCCCCCCCCcEEEECCceEEEEecccccC
Confidence             1245899999999999999776668999998753

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=96.68  E-value=0.0077  Score=64.25  Aligned_cols=139  Identities=22%  Similarity=0.230  Sum_probs=81.5

Q ss_pred             hcCccccceEEEeeecCC-----CceEEEEEEcccccccchHHHHHHHHHhcccCCCCc-ccccceeccCCceEEEEEec
Q 003836          508 ELGRGAFGTVYKGFVNMG-----SSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL-VRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       508 ~lG~G~~g~Vy~g~~~~~-----~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~ni-v~l~g~~~~~~~~~lV~E~~  581 (792)
                      .+..|-...+|+.....+     .++.+++|+..... ....+..+|.+++..+....+ .++++++..    .+|+||+
T Consensus         5 ~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~v~e~i   79 (302)
T cd05156           5 KISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV-ELLIDRERELVVFARLSERNLGPKLYGIFPN----GRIEEFI   79 (302)
T ss_pred             EecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC-cceechHHHHHHHHHHHhCCCCCceEEEeCC----Cchhhee
Confidence            355566678888765421     24578888865432 233456788888888754343 455555542    3589999


Q ss_pred             cCCCcccc-c----------------cCCC-CC------c----hhHHHH--------------------------HHHH
Q 003836          582 SNGTVASF-L----------------FGDS-KP------N----WKLRTE--------------------------IAMG  607 (792)
Q Consensus       582 ~~gsL~~~-l----------------~~~~-~l------~----~~~~~~--------------------------i~~~  607 (792)
                      +|..+... +                |... ..      .    +..+.+                          +...
T Consensus        80 ~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (302)
T cd05156          80 PSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFLED  159 (302)
T ss_pred             CCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHHHH
Confidence            98776531 1                1100 00      0    101100                          0111


Q ss_pred             HHHHHHHHhh------ccCCCeEecCCCCCcEEEcCC----CCeEEeecCCCcc
Q 003836          608 IAGGLFYLHE------ECCTQIIHCDIKPQNILLDDH----YNARISDFGLAKL  651 (792)
Q Consensus       608 ia~gL~yLH~------~~~~~ivH~dikp~NILl~~~----~~~kl~Dfg~a~~  651 (792)
                      +.+-+..|..      .....++|+|+.+.|||++++    +.++++||..+..
T Consensus       160 ~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~  213 (302)
T cd05156         160 EAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY  213 (302)
T ss_pred             HHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence            2222334432      234579999999999999985    8899999998853

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=96.10  E-value=0.021  Score=56.01  Aligned_cols=152  Identities=18%  Similarity=0.194  Sum_probs=91.9

Q ss_pred             ccceEEEeeecCCCceEEEEEEccccccc-chHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCCCcccccc
Q 003836          513 AFGTVYKGFVNMGSSNHVAVKKLNSVFQD-SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLF  591 (792)
Q Consensus       513 ~~g~Vy~g~~~~~~~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~  591 (792)
                      +.++.-.++...+   +..+|++....-. ....|.++.+++++++  .|+++..=  ..-.+-++.|+|-.        
T Consensus        74 gNsTl~~~kt~iG---~L~lKKi~slp~~~~~~~y~nky~v~Armh--GilrL~ND--n~~~yGvIlE~Cy~--------  138 (308)
T PF07387_consen   74 GNSTLLIGKTKIG---PLFLKKIRSLPCCINDALYFNKYRVFARMH--GILRLKND--NNYKYGVILERCYK--------  138 (308)
T ss_pred             CceEEEEeccccc---hhhhhhccCCCcccchhhhhhhhhHHHHhh--heeEeecC--CCceeEEEEeeccC--------
Confidence            3344444443332   4566776654333 4567888889988875  46666522  33345689998843        


Q ss_pred             CCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccccccccCCccc
Q 003836          592 GDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVA  671 (792)
Q Consensus       592 ~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~a  671 (792)
                          ......-.|..+ .++|.-.|+. ..+.+|+|..|+|||-|..|.+||.|=+....             .+--|.-
T Consensus       139 ----~~i~~~N~i~ag-i~~L~~fH~~-~~~~lHGD~np~NiM~D~~G~lKlVDP~~Ll~-------------~~V~~vN  199 (308)
T PF07387_consen  139 ----IKINFSNFITAG-IKDLMDFHSE-NQHCLHGDCNPDNIMCDKFGYLKLVDPVCLLE-------------NQVNMVN  199 (308)
T ss_pred             ----cccchhHHHHHh-HHHHHHhhcc-CCCeecCCCChhheeecCCCCEEecChhhhhh-------------heeeEEe
Confidence                111111112222 3567778854 35899999999999999999999999654321             0111222


Q ss_pred             ccccccCCCCcccceehHHHHHHHHHhcCc
Q 003836          672 PEWFRNMPITVKVDVYSYGVLLLEIICLRR  701 (792)
Q Consensus       672 PE~~~~~~~~~k~DV~S~Gv~l~el~tg~~  701 (792)
                      -|   ....|.++.+=+|=.-+++++...+
T Consensus       200 ~~---Y~~lT~~aE~~~fv~s~l~~v~~~~  226 (308)
T PF07387_consen  200 IE---YESLTQEAEVKVFVKSCLKLVEKQR  226 (308)
T ss_pred             ee---ccccChHHHHHHHHHHHHHHHHHHh
Confidence            11   2345777888777777777776554

The function of this family is unknown.

>PLN02236 choline kinase

Probab=95.99  E-value=0.041  Score=59.76  Aligned_cols=138  Identities=17%  Similarity=0.170  Sum_probs=80.7

Q ss_pred             cCccccceEEEeeecCC---CceEEEEEEcccccccchHHHHHHHHHhcccCCCCc-ccccceeccCCceEEEEEeccCC
Q 003836          509 LGRGAFGTVYKGFVNMG---SSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL-VRLLGYCDEGQNRLLVYEFMSNG  584 (792)
Q Consensus       509 lG~G~~g~Vy~g~~~~~---~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~ni-v~l~g~~~~~~~~~lV~E~~~~g  584 (792)
                      |-.|-...+|+.....+   ..+.+++|+....... .-...+|..++..+...++ .++++.+..+    .|.||+++.
T Consensus        44 l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~-~idR~~E~~~~~~l~~~gl~P~~~~~~~~g----~v~efi~g~  118 (344)
T PLN02236         44 LKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVEL-FFDRDDEIRTFECMSRHGQGPRLLGRFPNG----RVEEFIHAR  118 (344)
T ss_pred             cCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCe-eechHHHHHHHHHHHHcCCCCceEEEECCc----eEEEeeCCC
Confidence            44566678888764322   2357888887654322 2234778888888865555 4566666443    589999887


Q ss_pred             Ccccc-----------------ccCCC------CCchhHHHHHHHH-----------------HHHHHHHHhh-----cc
Q 003836          585 TVASF-----------------LFGDS------KPNWKLRTEIAMG-----------------IAGGLFYLHE-----EC  619 (792)
Q Consensus       585 sL~~~-----------------l~~~~------~l~~~~~~~i~~~-----------------ia~gL~yLH~-----~~  619 (792)
                      +|...                 +|...      ...+..+.++..+                 +...+..|..     ..
T Consensus       119 ~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~~  198 (344)
T PLN02236        119 TLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDDQ  198 (344)
T ss_pred             CCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccCC
Confidence            76421                 11111      1112222222211                 1112222221     11


Q ss_pred             CCCeEecCCCCCcEEEcC-CCCeEEeecCCCcc
Q 003836          620 CTQIIHCDIKPQNILLDD-HYNARISDFGLAKL  651 (792)
Q Consensus       620 ~~~ivH~dikp~NILl~~-~~~~kl~Dfg~a~~  651 (792)
                      ...++|+|+++.|||+++ ++.+.++||..+..
T Consensus       199 ~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~  231 (344)
T PLN02236        199 EIGFCHNDLQYGNIMIDEETRAITIIDYEYASY  231 (344)
T ss_pred             CceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence            236899999999999986 47899999988764

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=95.97  E-value=0.042  Score=57.75  Aligned_cols=72  Identities=17%  Similarity=0.322  Sum_probs=45.5

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccC---CCCcccccceeccCCceEEEEEeccC
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH---HKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~---h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      +.++.|....+|+..   .+++.+-||.-.   ......|..|.+-|+.|.   --.+++++++....+..+||+||++.
T Consensus        23 ~~v~GG~i~~a~~~~---~~~~~~FvK~~~---~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~~   96 (288)
T PF03881_consen   23 EPVSGGDINEAYRLD---TDGGSYFVKVNS---ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLEM   96 (288)
T ss_dssp             EEE--SSSSEEEEEE---TTS-EEEEEEEE---GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE----
T ss_pred             EecCCCChhheEEEE---CCCccEEEEecC---hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeecC
Confidence            358888889999864   345689999865   233457888888777773   45577888888777777999999987


Q ss_pred             C
Q 003836          584 G  584 (792)
Q Consensus       584 g  584 (792)
                      +
T Consensus        97 ~   97 (288)
T PF03881_consen   97 G   97 (288)
T ss_dssp             -
T ss_pred             C
Confidence            6

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=95.85  E-value=0.072  Score=55.87  Aligned_cols=31  Identities=29%  Similarity=0.528  Sum_probs=26.1

Q ss_pred             CeEecCCCCCcEEEcCCCC-eEEeecCCCccc
Q 003836          622 QIIHCDIKPQNILLDDHYN-ARISDFGLAKLL  652 (792)
Q Consensus       622 ~ivH~dikp~NILl~~~~~-~kl~Dfg~a~~~  652 (792)
                      .++|+|++|.|||+++++. .-|+||+.+...
T Consensus       186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iG  217 (276)
T cd05152         186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKVG  217 (276)
T ss_pred             eeEeCCCCCCcEEEeCCCCEEEEECcHhcccC
Confidence            5899999999999997555 469999998753

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=95.74  E-value=0.12  Score=54.65  Aligned_cols=121  Identities=23%  Similarity=0.278  Sum_probs=74.7

Q ss_pred             ceEEEEEEccc--ccccchHHHHHHHHHhcccCC--CCcccccceeccCC--ceEEEEEeccCCCccccccCCCCCchhH
Q 003836          527 SNHVAVKKLNS--VFQDSEKEFKAEVNGIGQTHH--KNLVRLLGYCDEGQ--NRLLVYEFMSNGTVASFLFGDSKPNWKL  600 (792)
Q Consensus       527 ~~~vavK~~~~--~~~~~~~~~~~Ei~~l~~l~h--~niv~l~g~~~~~~--~~~lV~E~~~~gsL~~~l~~~~~l~~~~  600 (792)
                      ++.+++. ...  ..........+|.++|+.+.-  .-....+++|.++.  ..+.||+|.++..+.+.+......    
T Consensus        48 ~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~~~~~~~~~~----  122 (321)
T COG3173          48 GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVWSALPPESLG----  122 (321)
T ss_pred             CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceeccCcCCcccch----
Confidence            4567776 221  222334556677777777643  33455677777666  678999999985444433211100    


Q ss_pred             HHHHH-HHHHHHH--------------------------------------------------HHHhhcc-----CCCeE
Q 003836          601 RTEIA-MGIAGGL--------------------------------------------------FYLHEEC-----CTQII  624 (792)
Q Consensus       601 ~~~i~-~~ia~gL--------------------------------------------------~yLH~~~-----~~~iv  624 (792)
                       .+++ ..+++.|                                                  .+|+...     ...++
T Consensus       123 -~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl~~~~p~~~~~~~lv  201 (321)
T COG3173         123 -RQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWLEANRPPWAGPPVLV  201 (321)
T ss_pred             -HHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHHHhcCCCcCCCceee
Confidence             1111 1333333                                                  3444332     14699


Q ss_pred             ecCCCCCcEEEcCCCCeEEeecCCCcccc
Q 003836          625 HCDIKPQNILLDDHYNARISDFGLAKLLT  653 (792)
Q Consensus       625 H~dikp~NILl~~~~~~kl~Dfg~a~~~~  653 (792)
                      |+|+++.||+++.+.-+-+.||+++....
T Consensus       202 HGD~~~gNlii~~~~~~gVlDwe~~~lGD  230 (321)
T COG3173         202 HGDYRPGNLIIDPGRPTGVLDWELATLGD  230 (321)
T ss_pred             eCCcccCCEEEeCCCeeEEEeccccccCC
Confidence            99999999999999889999999998654

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=95.66  E-value=0.0007  Score=82.01  Aligned_cols=155  Identities=11%  Similarity=-0.032  Sum_probs=108.4

Q ss_pred             HHHHHhcccCCCCccccccee--ccCCceEEEEEeccCCCccccccCC----CCCchhHHHHHHHHHHHHHHHHhhccCC
Q 003836          548 AEVNGIGQTHHKNLVRLLGYC--DEGQNRLLVYEFMSNGTVASFLFGD----SKPNWKLRTEIAMGIAGGLFYLHEECCT  621 (792)
Q Consensus       548 ~Ei~~l~~l~h~niv~l~g~~--~~~~~~~lV~E~~~~gsL~~~l~~~----~~l~~~~~~~i~~~ia~gL~yLH~~~~~  621 (792)
                      .|...++...|+++.....=.  .+..+.+.+++|+..|.+.+.+-+.    ..++.......-.+...+..-.|.....
T Consensus      1278 ~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnl 1357 (2724)
T KOG1826|consen 1278 SERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNL 1357 (2724)
T ss_pred             hhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccC
Confidence            344445556788877655433  2344678899999999999888654    2223332222233324445555554322


Q ss_pred             --CeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhc
Q 003836          622 --QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICL  699 (792)
Q Consensus       622 --~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg  699 (792)
                        -.+|+++|+-|.+|..+.++|+.++|+.+...+.... .....+++.|++|+......++.++|+|..|+.+|+..-|
T Consensus      1358 g~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~sf-~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~ 1436 (2724)
T KOG1826|consen 1358 GNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLSF-FGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDG 1436 (2724)
T ss_pred             CccchhhhhhhhccceecCCcccccccccccccCchHhh-hhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcc
Confidence              3689999999999999999999999999944332222 2234577889999999999999999999999999999888


Q ss_pred             CcCC
Q 003836          700 RRNI  703 (792)
Q Consensus       700 ~~p~  703 (792)
                      ..+|
T Consensus      1437 n~~f 1440 (2724)
T KOG1826|consen 1437 NAYF 1440 (2724)
T ss_pred             cHHH
Confidence            7765

>PLN02756 S-methyl-5-thioribose kinase

Probab=95.60  E-value=0.099  Score=57.23  Aligned_cols=72  Identities=13%  Similarity=0.212  Sum_probs=47.6

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccc-------cchHHHHHHHHHhcccC---CCCcccccceeccCCceEE
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ-------DSEKEFKAEVNGIGQTH---HKNLVRLLGYCDEGQNRLL  576 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~-------~~~~~~~~Ei~~l~~l~---h~niv~l~g~~~~~~~~~l  576 (792)
                      +.||.|....||+....   +..++||.-.....       ....+-..|.+.|+.+.   ...+.+++.++.  +..++
T Consensus        38 ~eiggGn~N~VyrV~~~---~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~vl  112 (418)
T PLN02756         38 KEVGDGNLNFVYIVVSS---SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMALI  112 (418)
T ss_pred             EEcCCCceeeEEEEEcC---CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCEE
Confidence            46899999999997542   34688997652111       13334444566665553   357888888887  34678


Q ss_pred             EEEeccC
Q 003836          577 VYEFMSN  583 (792)
Q Consensus       577 V~E~~~~  583 (792)
                      +||++++
T Consensus       113 vME~L~~  119 (418)
T PLN02756        113 GMRYLEP  119 (418)
T ss_pred             EEeecCC
Confidence            8999977

>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]

Probab=95.23  E-value=0.051  Score=58.19  Aligned_cols=60  Identities=20%  Similarity=0.222  Sum_probs=43.3

Q ss_pred             EEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC
Q 003836          575 LLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD  637 (792)
Q Consensus       575 ~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~  637 (792)
                      .|+=+|+++-++..++... ..++....+++.--++||.-+-.-  .+.+|.|++|.||++.-
T Consensus       321 vl~E~~~~Gl~v~~~v~~~-~~pe~l~kkva~lg~~AllkMl~v--DNFvHaDlHPGNVlirf  380 (565)
T KOG1236|consen  321 VLVETYERGLSVLRFVKWK-SQPEALVKKVAKLGVNALLKMLIV--DNFVHADLHPGNVLIRF  380 (565)
T ss_pred             eeeeeccccccHHhhhhcc-cChHHHHHHHHHHHHHHHHHHHHh--hcceecccCCCcEEEEe
Confidence            4666788888888888543 344567777777777776544332  38999999999999963

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=94.98  E-value=0.16  Score=54.35  Aligned_cols=29  Identities=31%  Similarity=0.421  Sum_probs=25.7

Q ss_pred             CCeEecCCCCCcEEEcCCCCeEEeecCCCc
Q 003836          621 TQIIHCDIKPQNILLDDHYNARISDFGLAK  650 (792)
Q Consensus       621 ~~ivH~dikp~NILl~~~~~~kl~Dfg~a~  650 (792)
                      .+++|+|+++.||+++. +.+.|+||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~  215 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT  215 (313)
T ss_pred             CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence            58999999999999998 678999998764

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=94.98  E-value=0.04  Score=55.30  Aligned_cols=119  Identities=17%  Similarity=0.225  Sum_probs=60.7

Q ss_pred             eEEEEEEcccccccchHHHHHHHHHhcccCCCCc-ccccceeccCCceEEEEEeccCCCcccc-ccC-------------
Q 003836          528 NHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL-VRLLGYCDEGQNRLLVYEFMSNGTVASF-LFG-------------  592 (792)
Q Consensus       528 ~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~ni-v~l~g~~~~~~~~~lV~E~~~~gsL~~~-l~~-------------  592 (792)
                      +.|+||+.... ....-...+|..+++.+...++ .++++++.++    .|+||+++..|..- +..             
T Consensus         3 ~~~~~Ri~g~~-t~~~idr~~E~~~~~~l~~~g~~p~~~~~~~~g----~v~e~i~g~~l~~~~~~~~~~~~~iA~~l~~   77 (211)
T PF01633_consen    3 EKYLVRIPGEG-TENFIDRENENEALKLLSEAGLGPKIIYFFENG----RVEEFIEGRTLSPEDFRNPEILKRIAKLLAK   77 (211)
T ss_dssp             SEEEEEEEESC-GCSHHHHHHHHHHHHHHHHTTSSS-EEEEETTE----EEEE--SSEE--CGGGGSHHHHHHHHHHHHH
T ss_pred             CEEEEEeCCCC-cccccCHHHHHHHHHHHHHcCCCCeEEEEcCCC----cEEEEecccccChhhccChHHHHHHHHHHHH
Confidence            46778877654 3344577888999988876555 5566665443    57799977665431 110             


Q ss_pred             ---C-------CCCchhHHHHH----------------------HHHHHHHHHHHhh---c--cCCCeEecCCCCCcEEE
Q 003836          593 ---D-------SKPNWKLRTEI----------------------AMGIAGGLFYLHE---E--CCTQIIHCDIKPQNILL  635 (792)
Q Consensus       593 ---~-------~~l~~~~~~~i----------------------~~~ia~gL~yLH~---~--~~~~ivH~dikp~NILl  635 (792)
                         .       ...-+....++                      ...+..-+..+..   .  ....+.|.|+.+.|||+
T Consensus        78 lH~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~v~cHnDl~~~Nil~  157 (211)
T PF01633_consen   78 LHSIPISPNSKKPDLWDRIDKYMNKKSEFLFKRKKKKKSIDKEDLEDLQEELEELEKLLEKSNSPLVFCHNDLNPGNILI  157 (211)
T ss_dssp             HHTHHHTTSSSS-HHHHHHHHHHHHHHTCCCCHHTTTCHHHHHHHHHHHHHHHHHHHHHHTSCGGEEEE-S--SGGGEEE
T ss_pred             HhhcccccccCcchHHHHhhhhccchhhhhhhhhhhccccccCCHHHHHHHHhhhhhhhhccCCCceEeeccCccccEEe
Confidence               0       00011111111                      0111222222221   1  11368999999999999


Q ss_pred             -cCCCCeEEeecCCCcc
Q 003836          636 -DDHYNARISDFGLAKL  651 (792)
Q Consensus       636 -~~~~~~kl~Dfg~a~~  651 (792)
                       +.++.++++||..+..
T Consensus       158 ~~~~~~~~lIDfEya~~  174 (211)
T PF01633_consen  158 NNKDGEVKLIDFEYAGY  174 (211)
T ss_dssp             TSSSSCEEE--GTT-EE
T ss_pred             ccCCCeEEEecHHHHhh
Confidence             8899999999988753

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=94.96  E-value=0.037  Score=57.52  Aligned_cols=134  Identities=15%  Similarity=0.122  Sum_probs=85.7

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccc---------cc--------c-----chHHHHHHHHHhcccCC--
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV---------FQ--------D-----SEKEFKAEVNGIGQTHH--  558 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~---------~~--------~-----~~~~~~~Ei~~l~~l~h--  558 (792)
                      +.+.+.||-|.-+.||.+...  .+++.++|.-+-.         .+        .     ..-...+|...|..|..  
T Consensus        94 ~svGnqIGVGKESDIY~v~d~--~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~g  171 (465)
T KOG2268|consen   94 ESVGNQIGVGKESDIYVVADE--EGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERG  171 (465)
T ss_pred             hhhccccccccccceEEEecC--CCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcC
Confidence            345678999999999998654  3456777742110         00        0     01234467777777643  


Q ss_pred             CCcccccceeccCCceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC
Q 003836          559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH  638 (792)
Q Consensus       559 ~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~  638 (792)
                      --+.+.+++    +..++|||++.+-.|...-+-   .+.+++..-++.+   +--|...   |+||+|..-=||+++++
T Consensus       172 fpVPkpiD~----~RH~Vvmelv~g~Pl~~v~~v---~d~~~ly~~lm~~---Iv~la~~---GlIHgDFNEFNimv~dd  238 (465)
T KOG2268|consen  172 FPVPKPIDH----NRHCVVMELVDGYPLRQVRHV---EDPPTLYDDLMGL---IVRLANH---GLIHGDFNEFNIMVKDD  238 (465)
T ss_pred             CCCCCcccc----cceeeHHHhhcccceeeeeec---CChHHHHHHHHHH---HHHHHHc---CceecccchheeEEecC
Confidence            334555544    345789999999887765432   2333333332222   2334444   99999999999999999


Q ss_pred             CCeEEeecCCCcc
Q 003836          639 YNARISDFGLAKL  651 (792)
Q Consensus       639 ~~~kl~Dfg~a~~  651 (792)
                      +.++++||--...
T Consensus       239 ~~i~vIDFPQmvS  251 (465)
T KOG2268|consen  239 DKIVVIDFPQMVS  251 (465)
T ss_pred             CCEEEeechHhhc
Confidence            9999999965543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	792
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		6e-58
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		2e-57
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		1e-40
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		9e-40
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		2e-38
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		4e-38
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		6e-38
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		4e-35
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		2e-21
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		4e-21
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		2e-20
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		1e-19
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		1e-19
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		1e-19
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		1e-19
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		1e-19
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		1e-19
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		1e-19
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		1e-19
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		1e-19
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		2e-19
2pl0_A	289	Lck Bound To Imatinib Length = 289		2e-19
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-19
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		2e-19
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		2e-19
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		2e-19
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		3e-19
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-19
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		4e-19
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		4e-19
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		4e-19
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		5e-19
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		5e-19
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		5e-19
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		5e-19
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		5e-19
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		8e-19
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		1e-18
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-18
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		1e-18
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		1e-18
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		2e-18
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		2e-18
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		2e-18
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		2e-18
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		2e-18
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		2e-18
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		2e-18
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		2e-18
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		2e-18
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-18
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		3e-18
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		3e-18
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		3e-18
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		3e-18
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-18
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		3e-18
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-18
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		3e-18
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		3e-18
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		3e-18
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		3e-18
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		3e-18
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		3e-18
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		3e-18
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		3e-18
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		4e-18
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		4e-18
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		4e-18
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		4e-18
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		4e-18
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		4e-18
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		4e-18
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		4e-18
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		4e-18
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		4e-18
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		6e-18
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		7e-18
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		8e-18
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		8e-18
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		9e-18
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		9e-18
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		9e-18
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		9e-18
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		9e-18
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		1e-17
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		1e-17
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		1e-17
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		1e-17
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		1e-17
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		1e-17
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		1e-17
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		1e-17
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		1e-17
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		1e-17
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		1e-17
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		1e-17
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		1e-17
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		1e-17
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		1e-17
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		1e-17
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		1e-17
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-17
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		1e-17
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		1e-17
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		1e-17
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		2e-17
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		2e-17
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		2e-17
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		2e-17
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		2e-17
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		3e-17
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		3e-17
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		3e-17
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		4e-17
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		4e-17
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		4e-17
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		5e-17
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		5e-17
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		5e-17
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		5e-17
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		5e-17
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		5e-17
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		9e-17
3a4o_X	286	Lyn Kinase Domain Length = 286		1e-16
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		2e-16
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		2e-16
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		2e-16
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		2e-16
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		2e-16
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		2e-16
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		3e-16
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		3e-16
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		3e-16
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		3e-16
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		4e-16
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		4e-16
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		4e-16
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		4e-16
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		4e-16
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		4e-16
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		5e-16
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		5e-16
4fl3_A	635	Structural And Biophysical Characterization Of The		5e-16
4fl2_A	636	Structural And Biophysical Characterization Of The		5e-16
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		6e-16
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		6e-16
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		6e-16
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		7e-16
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		7e-16
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		7e-16
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		7e-16
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		7e-16
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		8e-16
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		8e-16
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		8e-16
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		8e-16
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		9e-16
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		1e-15
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		1e-15
4h58_A	275	Braf In Complex With Compound 3 Length = 275		1e-15
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		1e-15
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		1e-15
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		1e-15
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		1e-15
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		1e-15
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		1e-15
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		1e-15
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		1e-15
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		1e-15
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		1e-15
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		1e-15
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		1e-15
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		1e-15
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		1e-15
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		1e-15
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		1e-15
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		1e-15
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		1e-15
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		1e-15
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		2e-15
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		2e-15
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		2e-15
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		2e-15
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		2e-15
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		2e-15
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		2e-15
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		3e-15
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		3e-15
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		3e-15
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		3e-15
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		3e-15
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		3e-15
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		4e-15
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		4e-15
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		4e-15
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		4e-15
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		4e-15
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		4e-15
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		5e-15
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		5e-15
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		6e-15
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		6e-15
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		6e-15
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		8e-15
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		8e-15
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		9e-15
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		1e-14
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		1e-14
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		1e-14
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		1e-14
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		1e-14
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		2e-14
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		2e-14
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		2e-14
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		2e-14
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		2e-14
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		2e-14
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		2e-14
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		2e-14
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		2e-14
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		2e-14
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		2e-14
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		2e-14
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		2e-14
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		2e-14
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		2e-14
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		2e-14
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		2e-14
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		2e-14
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		3e-14
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		3e-14
1fvr_A	327	Tie2 Kinase Domain Length = 327		3e-14
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		3e-14
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		5e-14
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		5e-14
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		6e-14
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		6e-14
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		6e-14
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		6e-14
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		6e-14
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		7e-14
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		8e-14
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		8e-14
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		8e-14
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		8e-14
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		8e-14
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		9e-14
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		1e-13
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		1e-13
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		1e-13
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		1e-13
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		1e-13
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		1e-13
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		1e-13
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		1e-13
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		1e-13
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		1e-13
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		1e-13
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		1e-13
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		1e-13
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		1e-13
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-13
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		1e-13
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		1e-13
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		1e-13
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		1e-13
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		1e-13
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		1e-13
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		1e-13
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		1e-13
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		1e-13
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		1e-13
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		2e-13
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		2e-13
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		2e-13
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		2e-13
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		2e-13
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		2e-13
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		2e-13
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		2e-13
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		2e-13
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		2e-13
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		2e-13
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		2e-13
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		2e-13
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		2e-13
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		2e-13
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		2e-13
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		2e-13
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		2e-13
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		2e-13
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		2e-13
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		2e-13
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		2e-13
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		2e-13
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		2e-13
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		2e-13
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		3e-13
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		3e-13
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		3e-13
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		3e-13
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		3e-13
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		3e-13
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		3e-13
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		3e-13
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		3e-13
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		3e-13
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		3e-13
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		3e-13
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		3e-13
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		3e-13
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		3e-13
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		3e-13
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-13
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		3e-13
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-13
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		4e-13
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		4e-13
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		4e-13
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		4e-13
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		4e-13
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		4e-13
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		4e-13
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		4e-13
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		4e-13
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		4e-13
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		4e-13
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		5e-13
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		5e-13
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		5e-13
3a7f_A	303	Human Mst3 Kinase Length = 303		5e-13
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		5e-13
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-13
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		5e-13
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		5e-13
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		5e-13
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		5e-13
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		5e-13
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		5e-13
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		5e-13
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		6e-13
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		6e-13
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		6e-13
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		6e-13
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		6e-13
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		7e-13
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		7e-13
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		8e-13
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		8e-13
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		9e-13
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		9e-13
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		1e-12
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		1e-12
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		1e-12
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		1e-12
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		1e-12
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		1e-12
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		1e-12
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		1e-12
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		1e-12
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		1e-12
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		1e-12
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		2e-12
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		2e-12
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		2e-12
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		2e-12
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		2e-12
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		2e-12
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		2e-12
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		2e-12
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		2e-12
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		2e-12
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		2e-12
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		3e-12
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		3e-12
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		3e-12
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		3e-12
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		4e-12
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		4e-12
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		7e-12
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		7e-12
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		7e-12
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		8e-12
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		9e-12
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		9e-12
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		9e-12
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		9e-12
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		1e-11
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		1e-11
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		1e-11
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		1e-11
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		1e-11
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		1e-11
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		1e-11
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		1e-11
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		1e-11
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		1e-11
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		1e-11
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		1e-11
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		1e-11
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		1e-11
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		1e-11
3q4t_A	322	Crystal Structure Of Activin Receptor Type-Iia (Acv		2e-11
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		2e-11
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		2e-11
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		2e-11
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		2e-11
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-11
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		2e-11
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-11
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		2e-11
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		2e-11
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		2e-11
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-11
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-11
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		3e-11
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-11
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-11
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		3e-11
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		3e-11
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		3e-11
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		3e-11
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		3e-11
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		3e-11
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-11
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		3e-11
3kk9_A	282	Camkii Substrate Complex B Length = 282		4e-11
4fie_A	423	Full-Length Human Pak4 Length = 423		4e-11
3kk8_A	284	Camkii Substrate Complex A Length = 284		4e-11
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		4e-11
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		4e-11
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		4e-11
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		4e-11
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		4e-11
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		4e-11
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		5e-11
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		5e-11
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		5e-11
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		5e-11
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		5e-11
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		5e-11
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		6e-11
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		6e-11
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		6e-11
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		6e-11
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		6e-11
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		6e-11
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		6e-11
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		6e-11
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		6e-11
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		7e-11
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		7e-11
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		7e-11
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		8e-11
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		8e-11
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		9e-11
3b2t_A	311	Structure Of Phosphotransferase Length = 311		9e-11
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		9e-11
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		9e-11
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		9e-11
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		1e-10
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		1e-10
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		1e-10
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		1e-10
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		1e-10
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		1e-10
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		1e-10
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		1e-10
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-10
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		1e-10
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-10
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		1e-10
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		1e-10
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		1e-10
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		1e-10
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		1e-10
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		1e-10
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		1e-10
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		1e-10
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		1e-10
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		1e-10
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		1e-10
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		2e-10
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		2e-10
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		2e-10
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		2e-10
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		2e-10
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		2e-10
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		2e-10
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		2e-10
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		2e-10
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-10
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		2e-10
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-10
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		2e-10
4fvp_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain (		2e-10
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		2e-10
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		2e-10
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		2e-10
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		2e-10
3g2f_A	336	Crystal Structure Of The Kinase Domain Of Bone Morp		2e-10
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		2e-10
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		2e-10
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		2e-10
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		2e-10
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		3e-10
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		3e-10
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		3e-10
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		3e-10
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		3e-10
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		3e-10
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		3e-10
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		3e-10
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		3e-10
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-10
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		3e-10
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		3e-10
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		3e-10
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		3e-10
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		3e-10
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		3e-10
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		3e-10
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		3e-10
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		3e-10
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		3e-10
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		3e-10
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		3e-10
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		3e-10
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		3e-10
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		3e-10
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		3e-10
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		4e-10
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		4e-10
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		4e-10
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		4e-10
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		4e-10
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		4e-10
2oza_B	366	Structure Of P38alpha Complex Length = 366		4e-10
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		4e-10
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		4e-10
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		4e-10
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		4e-10
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		4e-10
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		4e-10
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		4e-10
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		4e-10
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		4e-10
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		4e-10
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		4e-10
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		4e-10
4fvr_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain M		4e-10
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		5e-10
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		5e-10
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		5e-10
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		5e-10
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		5e-10
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		5e-10
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		5e-10
3g51_A	325	Structural Diversity Of The Active Conformation Of		5e-10
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		5e-10
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		6e-10
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		6e-10
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		6e-10
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		6e-10
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		6e-10
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		6e-10
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		6e-10
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		6e-10
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		6e-10
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		6e-10
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		6e-10
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		6e-10
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		6e-10
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		6e-10
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		6e-10
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		6e-10
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		6e-10
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		6e-10
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		7e-10
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		7e-10
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		7e-10
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		7e-10
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		7e-10
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		7e-10
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		7e-10
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		7e-10
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		7e-10
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		7e-10
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		7e-10
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		7e-10
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		8e-10
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		8e-10
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		8e-10
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		8e-10
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		8e-10
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		8e-10
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		8e-10
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		8e-10
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		8e-10
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		8e-10
3hec_A	348	P38 In Complex With Imatinib Length = 348		8e-10
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		8e-10
2qlu_A	314	Crystal Structure Of Activin Receptor Type Ii Kinas		8e-10
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		8e-10
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		9e-10
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		9e-10
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		9e-10
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		9e-10
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		9e-10
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		1e-09
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		1e-09
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		1e-09
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		1e-09
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		1e-09
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		1e-09
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		1e-09
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		1e-09
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		1e-09
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		1e-09
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		1e-09
3soa_A	444	Full-Length Human Camkii Length = 444		1e-09
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		1e-09
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		1e-09
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		1e-09
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		1e-09
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		1e-09
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		1e-09
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		1e-09
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		1e-09
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		1e-09
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		1e-09
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		1e-09
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		1e-09
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		1e-09
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		1e-09
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		2e-09
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-09
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		2e-09
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		2e-09
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		2e-09
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		2e-09
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		2e-09
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		2e-09
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		2e-09
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		2e-09
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		2e-09
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		2e-09
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		2e-09
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		2e-09
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		2e-09
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		2e-09
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		2e-09
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		2e-09
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		2e-09
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		2e-09
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		2e-09
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		2e-09
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		2e-09
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		2e-09
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		2e-09
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		2e-09
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		2e-09
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		2e-09
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		2e-09
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		3e-09
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		3e-09
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		3e-09
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		3e-09
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		3e-09
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		3e-09
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		3e-09
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		3e-09
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		3e-09
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-09
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-09
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		3e-09
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		3e-09
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		3e-09
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		4e-09
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		4e-09
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		4e-09
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		4e-09
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		4e-09
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		4e-09
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		4e-09
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		4e-09
2y4i_B	319	Ksr2-Mek1 Heterodimer Length = 319		4e-09
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		4e-09
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		4e-09
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		4e-09
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		4e-09
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		4e-09
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		4e-09
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		5e-09
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		5e-09
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		5e-09
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		5e-09
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		5e-09
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		5e-09
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		5e-09
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		5e-09
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		6e-09
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		6e-09
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		6e-09
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		6e-09
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		6e-09
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		6e-09
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		6e-09
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		6e-09
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		6e-09
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		6e-09
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		6e-09
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		6e-09
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		6e-09
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		6e-09
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		6e-09
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		6e-09
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		6e-09
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		6e-09
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		7e-09
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		7e-09
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		7e-09
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		7e-09
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		7e-09
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		7e-09
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		7e-09
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		8e-09
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		8e-09
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		8e-09
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		8e-09
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		8e-09
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		8e-09
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		9e-09
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		9e-09
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		9e-09
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		9e-09
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		9e-09
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		1e-08
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		1e-08
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		1e-08
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		1e-08
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-08
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-08
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-08
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		1e-08
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		1e-08
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		1e-08
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		1e-08
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		1e-08
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		1e-08
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		1e-08
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		1e-08
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		1e-08
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		1e-08
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-08
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		1e-08
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		1e-08
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		1e-08
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		1e-08
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-08
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		2e-08
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		2e-08
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		2e-08
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		2e-08
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		2e-08
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		2e-08
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		2e-08
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		2e-08
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		2e-08
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		2e-08
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		2e-08
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		2e-08
3my0_A	305	Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai		2e-08
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		3e-08
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		3e-08
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		3e-08
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		3e-08
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		3e-08
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		3e-08
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		3e-08
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		4e-08
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		4e-08
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		4e-08
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		4e-08
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		4e-08
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		4e-08
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		4e-08
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		4e-08
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		4e-08
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		4e-08
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		4e-08
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		5e-08
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		5e-08
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		5e-08
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		5e-08
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		5e-08
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		5e-08
4exu_A	371	Mapk13, Inactive Form Length = 371		5e-08
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		5e-08
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		5e-08
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		5e-08
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		5e-08
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		5e-08
3p23_A	432	Crystal Structure Of The Human Kinase And Rnase Dom		5e-08
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		5e-08
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		5e-08
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		5e-08
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		5e-08
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		5e-08
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		5e-08
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		5e-08
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		6e-08
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		6e-08
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		6e-08
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		7e-08
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		7e-08
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		7e-08
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		8e-08
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		8e-08
2rio_A	434	Structure Of The Dual Enzyme Ire1 Reveals The Basis		9e-08
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		9e-08
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		1e-07
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		1e-07
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		1e-07
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		1e-07
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		1e-07
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		1e-07
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		1e-07
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		1e-07
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		1e-07
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		1e-07
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		1e-07
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		1e-07
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		2e-07
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		2e-07
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		2e-07
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		2e-07
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		2e-07
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		2e-07
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		2e-07
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		2e-07
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		2e-07
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		2e-07
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		2e-07
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		2e-07
3sdj_A	448	Structure Of Rnase-Inactive Point Mutant Of Oligome		2e-07
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		3e-07
3fbv_A	448	Crystal Structure Of The Oligomer Formed By The Kin		3e-07
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		3e-07
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		3e-07
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		3e-07
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		3e-07
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		3e-07
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		3e-07
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		3e-07
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		3e-07
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		3e-07
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		3e-07
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		3e-07
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		4e-07
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		4e-07
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		4e-07
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		4e-07
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		4e-07
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		4e-07
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		5e-07
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		5e-07
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		5e-07
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		5e-07
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		5e-07
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		5e-07
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		5e-07
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		5e-07
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		5e-07
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		5e-07
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		5e-07
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		5e-07
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		6e-07
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		6e-07
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		6e-07
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		6e-07
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		6e-07
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		6e-07
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		8e-07
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		8e-07
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		9e-07
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		1e-06
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		1e-06
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		1e-06
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		1e-06
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		1e-06
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		1e-06
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		1e-06
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		1e-06
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-06
3lj0_A	434	Ire1 Complexed With Adp And Quercetin Length = 434		1e-06
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		1e-06
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		1e-06
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		1e-06
3mdy_A	337	Crystal Structure Of The Cytoplasmic Domain Of The		1e-06
3mtf_A	301	Crystal Structure Of The Acvr1 Kinase In Complex Wi		1e-06
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		1e-06
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		1e-06
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		1e-06
4dym_A	301	Crystal Structure Of The Acvr1 Kinase Domain In Com		1e-06
3h9r_A	330	Crystal Structure Of The Kinase Domain Of Type I Ac		2e-06
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		2e-06
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		2e-06
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		2e-06
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		2e-06
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		2e-06
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		2e-06
4ae6_A	343	Structure And Function Of The Human Sperm-specific		2e-06
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		2e-06
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		2e-06
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		2e-06
1b6c_B	342	Crystal Structure Of The Cytoplasmic Domain Of The		2e-06
1vjy_A	303	Crystal Structure Of A Naphthyridine Inhibitor Of H		2e-06
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		2e-06
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		2e-06
1rw8_A	301	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		2e-06
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		2e-06
1py5_A	326	Crystal Structure Of Tgf-Beta Receptor I Kinase Wit		2e-06
2wot_A	306	Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)		2e-06
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		2e-06
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		3e-06
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		3e-06
3tzm_A	309	Tgf-Beta Receptor Type 1 In Complex With Sb431542 L		3e-06
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		3e-06
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		3e-06
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		3e-06
3ll6_A	337	Crystal Structure Of The Human Cyclin G Associated		3e-06
1z57_A	339	Crystal Structure Of Human Clk1 In Complex With 10z		3e-06
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		3e-06
4ae9_A	343	Structure And Function Of The Human Sperm-specific		3e-06
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		4e-06
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		4e-06
1q8y_A	373	The Structure Of The Yeast Sr Protein Kinase, Sky1p		4e-06
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		4e-06
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		4e-06
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		4e-06
1how_A	373	The X-Ray Crystal Structure Of Sky1p, An Sr Protein		4e-06
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		4e-06
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		4e-06
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		5e-06
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		5e-06
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		6e-06
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		6e-06
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		6e-06
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		6e-06
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		7e-06
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		9e-06
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		9e-06
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		9e-06
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		9e-06
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		1e-05
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		1e-05
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		1e-05
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		1e-05
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		1e-05
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		1e-05
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		1e-05
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		1e-05
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		1e-05
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		1e-05
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		1e-05
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		1e-05
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-05
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		1e-05
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		1e-05
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		1e-05
2exe_A	357	Crystal Structure Of The Phosphorylated Clk3 Length		1e-05
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		1e-05
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-05
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		2e-05
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		2e-05
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		2e-05
2eu9_A	355	Crystal Structure Of Clk3 Length = 355		2e-05
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-05
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		2e-05
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		2e-05
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		2e-05
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		2e-05
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-05
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		2e-05
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		2e-05
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		2e-05
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		2e-05
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		2e-05
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		2e-05
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		2e-05
2vag_A	339	Crystal Structure Of Di-Phosphorylated Human Clk1 I		2e-05
2wu6_A	381	Crystal Structure Of The Human Clk3 In Complex With		2e-05
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		2e-05
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		3e-05
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		3e-05
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		3e-05
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		3e-05
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		3e-05

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score =  222 bits (566), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 129/309 (41%), Positives = 176/309 (56%), Gaps = 10/309 (3%)
Query: 475 FMRPHQEDQGVSYMNLRCFTYKELVEVTRGF--KEELGRGAFGTVYKGFVNMGSSNHVAV 532
           F  P +ED  V    L+ F+ +EL   +  F  K  LGRG FG VYKG   +     VAV
Sbjct: 10  FDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKG--RLADGTLVAV 67
Query: 533 KKLNSV-FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLF 591
           K+L     Q  E +F+ EV  I    H+NL+RL G+C     RLLVY +M+NG+VAS L 
Sbjct: 68  KRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR 127
Query: 592 G--DSKP--NWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFG 647
              +S+P  +W  R  IA+G A GL YLH+ C  +IIH D+K  NILLD+ + A + DFG
Sbjct: 128 ERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 187
Query: 648 LAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNID-NE 706
           LAKL+     H   A+RGT G++APE+      + K DV+ YGV+LLE+I  +R  D   
Sbjct: 188 LAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLAR 247
Query: 707 ISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTM 766
           ++  D  +L DW     +E+ LEALV+ DL+       + + + VA  C Q  P  RP M
Sbjct: 248 LANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKM 307
Query: 767 RKVTQMLEG 775
            +V +MLEG
Sbjct: 308 SEVVRMLEG 316

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score =  220 bits (560), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 128/309 (41%), Positives = 175/309 (56%), Gaps = 10/309 (3%)
Query: 475 FMRPHQEDQGVSYMNLRCFTYKELVEVTRGF--KEELGRGAFGTVYKGFVNMGSSNHVAV 532
           F  P +ED  V    L+ F+ +EL   +  F  K  LGRG FG VYKG   +     VAV
Sbjct: 2   FDVPAEEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKG--RLADGXLVAV 59
Query: 533 KKLNSV-FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLF 591
           K+L     Q  E +F+ EV  I    H+NL+RL G+C     RLLVY +M+NG+VAS L 
Sbjct: 60  KRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR 119
Query: 592 G--DSKP--NWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFG 647
              +S+P  +W  R  IA+G A GL YLH+ C  +IIH D+K  NILLD+ + A + DFG
Sbjct: 120 ERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 179
Query: 648 LAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNID-NE 706
           LAKL+     H   A+RG  G++APE+      + K DV+ YGV+LLE+I  +R  D   
Sbjct: 180 LAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLAR 239
Query: 707 ISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTM 766
           ++  D  +L DW     +E+ LEALV+ DL+       + + + VA  C Q  P  RP M
Sbjct: 240 LANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKM 299
Query: 767 RKVTQMLEG 775
            +V +MLEG
Sbjct: 300 SEVVRMLEG 308

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score =  164 bits (416), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/285 (36%), Positives = 156/285 (54%), Gaps = 13/285 (4%)
Query: 497 ELVEVTRGFKEE--LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIG 554
           +L E T  F  +  +G G FG VYKG +  G+   VA+K+         +EF+ E+  + 
Sbjct: 33  DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAK--VALKRRTPESSQGIEEFETEIETLS 90
Query: 555 QTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP----NWKLRTEIAMGIAG 610
              H +LV L+G+CDE    +L+Y++M NG +   L+G   P    +W+ R EI +G A 
Sbjct: 91  FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 611 GLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT-LDQSHTNTAIRGTKGY 669
           GL YLH      IIH D+K  NILLD+++  +I+DFG++K  T LDQ+H    ++GT GY
Sbjct: 151 GLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGY 207
Query: 670 VAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLE 729
           + PE+F    +T K DVYS+GV+L E++C R  I   + + +   L +WA + +    LE
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR-EMVNLAEWAVESHNNGQLE 266
Query: 730 ALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
            +V+ +L        L +F   A  C+      RP+M  V   LE
Sbjct: 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score =  162 bits (409), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 102/285 (35%), Positives = 155/285 (54%), Gaps = 13/285 (4%)
Query: 497 ELVEVTRGFKEE--LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIG 554
           +L E T  F  +  +G G FG VYKG +  G+   VA+K+         +EF+ E+  + 
Sbjct: 33  DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAK--VALKRRTPESSQGIEEFETEIETLS 90
Query: 555 QTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP----NWKLRTEIAMGIAG 610
              H +LV L+G+CDE    +L+Y++M NG +   L+G   P    +W+ R EI +G A 
Sbjct: 91  FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 611 GLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT-LDQSHTNTAIRGTKGY 669
           GL YLH      IIH D+K  NILLD+++  +I+DFG++K  T L Q+H    ++GT GY
Sbjct: 151 GLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGY 207
Query: 670 VAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLE 729
           + PE+F    +T K DVYS+GV+L E++C R  I   + + +   L +WA + +    LE
Sbjct: 208 IDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR-EMVNLAEWAVESHNNGQLE 266
Query: 730 ALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
            +V+ +L        L +F   A  C+      RP+M  V   LE
Sbjct: 267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score =  157 bits (397), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/306 (35%), Positives = 167/306 (54%), Gaps = 26/306 (8%)
Query: 485 VSYMNLRCFTYKELVEVTRGFKE--------ELGRGAFGTVYKGFVNMGSSNHVAVKKLN 536
           VS      F++ EL  VT  F E        ++G G FG VYKG+VN   +  VAVKKL 
Sbjct: 7   VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN---NTTVAVKKLA 63
Query: 537 SVF----QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTV---ASF 589
           ++     ++ +++F  E+  + +  H+NLV LLG+  +G +  LVY +M NG++    S 
Sbjct: 64  AMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 123
Query: 590 LFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLA 649
           L G    +W +R +IA G A G+ +LHE      IH DIK  NILLD+ + A+ISDFGLA
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLA 180
Query: 650 KLL-TLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEIS 708
           +      Q+   + I GT  Y+APE  R   IT K D+YS+GV+LLEII     +D    
Sbjct: 181 RASEKFAQTVMXSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEH-- 237
Query: 709 KVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRK 768
           +  + +L        +E+T+E  ++  +   ++ T +     VA  C+ E  + RP ++K
Sbjct: 238 REPQLLLDIKEEIEDEEKTIEDYIDKKMNDADS-TSVEAMYSVASQCLHEKKNKRPDIKK 296
Query: 769 VTQMLE 774
           V Q+L+
Sbjct: 297 VQQLLQ 302

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score =  156 bits (395), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 110/306 (35%), Positives = 166/306 (54%), Gaps = 26/306 (8%)
Query: 485 VSYMNLRCFTYKELVEVTRGFKE--------ELGRGAFGTVYKGFVNMGSSNHVAVKKLN 536
           VS      F++ EL  VT  F E        ++G G FG VYKG+VN   +  VAVKKL 
Sbjct: 7   VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN---NTTVAVKKLA 63
Query: 537 SVF----QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTV---ASF 589
           ++     ++ +++F  E+  + +  H+NLV LLG+  +G +  LVY +M NG++    S 
Sbjct: 64  AMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 123
Query: 590 LFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLA 649
           L G    +W +R +IA G A G+ +LHE      IH DIK  NILLD+ + A+ISDFGLA
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLA 180
Query: 650 KLL-TLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEIS 708
           +      Q+     I GT  Y+APE  R   IT K D+YS+GV+LLEII     +D    
Sbjct: 181 RASEKFAQTVMXXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEH-- 237
Query: 709 KVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRK 768
           +  + +L        +E+T+E  ++  +   ++ T +     VA  C+ E  + RP ++K
Sbjct: 238 REPQLLLDIKEEIEDEEKTIEDYIDKKMNDADS-TSVEAMYSVASQCLHEKKNKRPDIKK 296
Query: 769 VTQMLE 774
           V Q+L+
Sbjct: 297 VQQLLQ 302

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score =  155 bits (393), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 110/306 (35%), Positives = 165/306 (53%), Gaps = 26/306 (8%)
Query: 485 VSYMNLRCFTYKELVEVTRGFKE--------ELGRGAFGTVYKGFVNMGSSNHVAVKKLN 536
           VS      F++ EL  VT  F E        ++G G FG VYKG+VN   +  VAVKKL 
Sbjct: 1   VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN---NTTVAVKKLA 57
Query: 537 SVF----QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTV---ASF 589
           ++     ++ +++F  E+  + +  H+NLV LLG+  +G +  LVY +M NG++    S 
Sbjct: 58  AMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 117
Query: 590 LFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLA 649
           L G    +W +R +IA G A G+ +LHE      IH DIK  NILLD+ + A+ISDFGLA
Sbjct: 118 LDGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLA 174
Query: 650 KLL-TLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEIS 708
           +      Q      I GT  Y+APE  R   IT K D+YS+GV+LLEII     +D    
Sbjct: 175 RASEKFAQXVMXXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEH-- 231
Query: 709 KVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRK 768
           +  + +L        +E+T+E  ++  +   ++ T +     VA  C+ E  + RP ++K
Sbjct: 232 REPQLLLDIKEEIEDEEKTIEDYIDKKMNDADS-TSVEAMYSVASQCLHEKKNKRPDIKK 290
Query: 769 VTQMLE 774
           V Q+L+
Sbjct: 291 VQQLLQ 296

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score =  146 bits (369), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 107/301 (35%), Positives = 158/301 (52%), Gaps = 26/301 (8%)
Query: 490 LRCFTYKELVEVTRGFKE--------ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-- 539
              F++ EL  VT  F E        + G G FG VYKG+VN   +  VAVKKL ++   
Sbjct: 3   FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVN---NTTVAVKKLAAMVDI 59
Query: 540 --QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVA---SFLFGDS 594
             ++ +++F  E+    +  H+NLV LLG+  +G +  LVY +  NG++    S L G  
Sbjct: 60  TTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTP 119
Query: 595 KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLL-T 653
             +W  R +IA G A G+ +LHE      IH DIK  NILLD+ + A+ISDFGLA+    
Sbjct: 120 PLSWHXRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKISDFGLARASEK 176
Query: 654 LDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKA 713
             Q    + I GT  Y APE  R   IT K D+YS+GV+LLEII     +D    +  + 
Sbjct: 177 FAQXVXXSRIVGTTAYXAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEH--REPQL 233
Query: 714 ILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQML 773
           +L        +E+T+E  ++      ++ T +     VA  C+ E  + RP ++KV Q+L
Sbjct: 234 LLDIKEEIEDEEKTIEDYIDKKXNDADS-TSVEAXYSVASQCLHEKKNKRPDIKKVQQLL 292
Query: 774 E 774
           +
Sbjct: 293 Q 293

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score =  101 bits (251), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 24/283 (8%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            KE++G G+FGTV++   + GS   V +        +   EF  EV  + +  H N+V  
Sbjct: 41  IKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLF 99
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLF---GDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           +G   +  N  +V E++S G++   L       + + + R  +A  +A G+ YLH     
Sbjct: 100 MGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-P 158
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT 681
            I+H D+K  N+L+D  Y  ++ DFGL++L       +  A  GT  ++APE  R+ P  
Sbjct: 159 PIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAA-GTPEWMAPEVLRDEPSN 217
Query: 682 VKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQ-ERTLEALVENDLEAMN 740
            K DVYS+GV+L E+  L++   N ++         +   R +  R L   V   +E   
Sbjct: 218 EKSDVYSFGVILWELATLQQPWGN-LNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEG-- 274
Query: 741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPIPP 783
                         C   +P  RP+   +  +L  +++  +PP
Sbjct: 275 --------------CWTNEPWKRPSFATIMDLLRPLIKSAVPP 303

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score =  100 bits (248), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 131/283 (46%), Gaps = 24/283 (8%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            KE++G G+FGTV++   + GS   V +        +   EF  EV  + +  H N+V  
Sbjct: 41  IKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLF 99
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLF---GDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           +G   +  N  +V E++S G++   L       + + + R  +A  +A G+ YLH     
Sbjct: 100 MGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-P 158
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT 681
            I+H ++K  N+L+D  Y  ++ DFGL++L       + +A  GT  ++APE  R+ P  
Sbjct: 159 PIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA-GTPEWMAPEVLRDEPSN 217
Query: 682 VKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQ-ERTLEALVENDLEAMN 740
            K DVYS+GV+L E+  L++   N ++         +   R +  R L   V   +E   
Sbjct: 218 EKSDVYSFGVILWELATLQQPWGN-LNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEG-- 274
Query: 741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPIPP 783
                         C   +P  RP+   +  +L  +++  +PP
Sbjct: 275 --------------CWTNEPWKRPSFATIMDLLRPLIKSAVPP 303

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 98.2 bits (243), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 144/309 (46%), Gaps = 42/309 (13%)
Query: 493 FTYKELVEVTRGFKEEL-----------GRGAFGTVYKGFVNMGSSNH--VAVKKLNSVF 539
           FT+++  E  R F +E+           G G FG V  G + +       VA+K L S +
Sbjct: 14  FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 540 QDSEK-EFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLF-GDSKPN 597
            + ++ +F +E + +GQ  H N++ L G   +    +++ EFM NG++ SFL   D +  
Sbjct: 74  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 133
Query: 598 WKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS 657
                 +  GIA G+ YL +      +H D+  +NIL++ +   ++SDFGL++ L  D S
Sbjct: 134 VIQLVGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 190
Query: 658 H-TNTAIRGTK---GYVAPEWFRNMPITVKVDVYSYGVLLLEIICL--RRNIDNEISKVD 711
             T T+  G K    + APE  +    T   DV+SYG+++ E++    R   D     V 
Sbjct: 191 DPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVI 250
Query: 712 KAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ 771
            AI  D+                    M+  + LH+ ++    C Q+D +HRP   ++  
Sbjct: 251 NAIEQDYRLP---------------PPMDCPSALHQLMLD---CWQKDRNHRPKFGQIVN 292
Query: 772 MLEGVVEVP 780
            L+ ++  P
Sbjct: 293 TLDKMIRNP 301

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 9/207 (4%)
Query: 497 ELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT 556
           E+   T    E LG G FG V+ G+ N      VAVK L      S   F AE N + Q 
Sbjct: 15  EVPRETLKLVERLGAGQFGEVWMGYYN--GHTKVAVKSLKQGSM-SPDAFLAEANLMKQL 71
Query: 557 HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFY 614
            H+ LVRL     + +   ++ E+M NG++  FL   S     +    ++A  IA G+ +
Sbjct: 72  QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 130
Query: 615 LHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEW 674
           + E      IH D++  NIL+ D  + +I+DFGLA+L+  ++       +    + APE 
Sbjct: 131 IEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 187
Query: 675 FRNMPITVKVDVYSYGVLLLEIICLRR 701
                 T+K DV+S+G+LL EI+   R
Sbjct: 188 INYGTFTIKSDVWSFGILLTEIVTHGR 214

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 9/207 (4%)
Query: 497 ELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT 556
           E+   T    E LG G FG V+ G+ N      VAVK L      S   F AE N + Q 
Sbjct: 17  EVPRETLKLVERLGAGQFGEVWMGYYN--GHTKVAVKSLKQGSM-SPDAFLAEANLMKQL 73
Query: 557 HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFY 614
            H+ LVRL     + +   ++ E+M NG++  FL   S     +    ++A  IA G+ +
Sbjct: 74  QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 132
Query: 615 LHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEW 674
           + E      IH D++  NIL+ D  + +I+DFGLA+L+  ++       +    + APE 
Sbjct: 133 IEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 189
Query: 675 FRNMPITVKVDVYSYGVLLLEIICLRR 701
                 T+K DV+S+G+LL EI+   R
Sbjct: 190 INYGTFTIKSDVWSFGILLTEIVTHGR 216

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 9/207 (4%)
Query: 497 ELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT 556
           E+   T    E LG G FG V+ G+ N      VAVK L      S   F AE N + Q 
Sbjct: 18  EVPRETLKLVERLGAGQFGEVWMGYYN--GHTKVAVKSLKQGSM-SPDAFLAEANLMKQL 74
Query: 557 HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFY 614
            H+ LVRL     + +   ++ E+M NG++  FL   S     +    ++A  IA G+ +
Sbjct: 75  QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 133
Query: 615 LHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEW 674
           + E      IH D++  NIL+ D  + +I+DFGLA+L+  ++       +    + APE 
Sbjct: 134 IEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 190
Query: 675 FRNMPITVKVDVYSYGVLLLEIICLRR 701
                 T+K DV+S+G+LL EI+   R
Sbjct: 191 INYGTFTIKSDVWSFGILLTEIVTHGR 217

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 9/207 (4%)
Query: 497 ELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT 556
           E+   T    E LG G FG V+ G+ N      VAVK L      S   F AE N + Q 
Sbjct: 9   EVPRETLKLVERLGAGQFGEVWMGYYN--GHTKVAVKSLKQGSM-SPDAFLAEANLMKQL 65
Query: 557 HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFY 614
            H+ LVRL     + +   ++ E+M NG++  FL   S     +    ++A  IA G+ +
Sbjct: 66  QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 615 LHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEW 674
           + E      IH D++  NIL+ D  + +I+DFGLA+L+  ++       +    + APE 
Sbjct: 125 IEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 181
Query: 675 FRNMPITVKVDVYSYGVLLLEIICLRR 701
                 T+K DV+S+G+LL EI+   R
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGR 208

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 9/207 (4%)
Query: 497 ELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT 556
           E+   T    E LG G FG V+ G+ N      VAVK L      S   F AE N + Q 
Sbjct: 11  EVPRETLKLVERLGAGQFGEVWMGYYN--GHTKVAVKSLKQGSM-SPDAFLAEANLMKQL 67
Query: 557 HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFY 614
            H+ LVRL     + +   ++ E+M NG++  FL   S     +    ++A  IA G+ +
Sbjct: 68  QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 126
Query: 615 LHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEW 674
           + E      IH D++  NIL+ D  + +I+DFGLA+L+  ++       +    + APE 
Sbjct: 127 IEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 183
Query: 675 FRNMPITVKVDVYSYGVLLLEIICLRR 701
                 T+K DV+S+G+LL EI+   R
Sbjct: 184 INYGTFTIKSDVWSFGILLTEIVTHGR 210

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 9/207 (4%)
Query: 497 ELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT 556
           E+   T    E LG G FG V+ G+ N      VAVK L      S   F AE N + Q 
Sbjct: 9   EVPRETLKLVERLGAGQFGEVWMGYYN--GHTKVAVKSLKQGSM-SPDAFLAEANLMKQL 65
Query: 557 HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFY 614
            H+ LVRL     + +   ++ E+M NG++  FL   S     +    ++A  IA G+ +
Sbjct: 66  QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 615 LHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEW 674
           + E      IH D++  NIL+ D  + +I+DFGLA+L+  ++       +    + APE 
Sbjct: 125 IEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 181
Query: 675 FRNMPITVKVDVYSYGVLLLEIICLRR 701
                 T+K DV+S+G+LL EI+   R
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGR 208

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 9/207 (4%)
Query: 497 ELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT 556
           E+   T    E LG G FG V+ G+ N      VAVK L      S   F AE N + Q 
Sbjct: 10  EVPRETLKLVERLGAGQFGEVWMGYYN--GHTKVAVKSLKQGSM-SPDAFLAEANLMKQL 66
Query: 557 HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFY 614
            H+ LVRL     + +   ++ E+M NG++  FL   S     +    ++A  IA G+ +
Sbjct: 67  QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 125
Query: 615 LHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEW 674
           + E      IH D++  NIL+ D  + +I+DFGLA+L+  ++       +    + APE 
Sbjct: 126 IEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEA 182
Query: 675 FRNMPITVKVDVYSYGVLLLEIICLRR 701
                 T+K DV+S+G+LL EI+   R
Sbjct: 183 INYGTFTIKSDVWSFGILLTEIVTHGR 209

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 9/207 (4%)
Query: 497 ELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT 556
           E+   T    E LG G FG V+ G+ N      VAVK L      S   F AE N + Q 
Sbjct: 14  EVPRETLKLVERLGAGQFGEVWMGYYN--GHTKVAVKSLKQGSM-SPDAFLAEANLMKQL 70
Query: 557 HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFY 614
            H+ LVRL     + +   ++ E+M NG++  FL   S     +    ++A  IA G+ +
Sbjct: 71  QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 129
Query: 615 LHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEW 674
           + E      IH D++  NIL+ D  + +I+DFGLA+L+  ++       +    + APE 
Sbjct: 130 IEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 186
Query: 675 FRNMPITVKVDVYSYGVLLLEIICLRR 701
                 T+K DV+S+G+LL EI+   R
Sbjct: 187 INYGTFTIKSDVWSFGILLTEIVTHGR 213

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 9/207 (4%)
Query: 497 ELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT 556
           E+   T    E LG G FG V+ G+ N      VAVK L      S   F AE N + Q 
Sbjct: 15  EVPRETLKLVERLGAGQFGEVWMGYYN--GHTKVAVKSLKQGSM-SPDAFLAEANLMKQL 71
Query: 557 HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFY 614
            H+ LVRL     + +   ++ E+M NG++  FL   S     +    ++A  IA G+ +
Sbjct: 72  QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 130
Query: 615 LHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEW 674
           + E      IH D++  NIL+ D  + +I+DFGLA+L+  ++       +    + APE 
Sbjct: 131 IEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 187
Query: 675 FRNMPITVKVDVYSYGVLLLEIICLRR 701
                 T+K DV+S+G+LL EI+   R
Sbjct: 188 INYGTFTIKSDVWSFGILLTEIVTHGR 214

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 9/207 (4%)
Query: 497 ELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT 556
           E+   T    E LG G FG V+ G+ N      VAVK L      S   F AE N + Q 
Sbjct: 9   EVPRETLKLVERLGAGQFGEVWMGYYN--GHTKVAVKSLKQGSM-SPDAFLAEANLMKQL 65
Query: 557 HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFY 614
            H+ LVRL     + +   ++ E+M NG++  FL   S     +    ++A  IA G+ +
Sbjct: 66  QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 615 LHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEW 674
           + E      IH D++  NIL+ D  + +I+DFGLA+L+  ++       +    + APE 
Sbjct: 125 IEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 181
Query: 675 FRNMPITVKVDVYSYGVLLLEIICLRR 701
                 T+K DV+S+G+LL EI+   R
Sbjct: 182 INYGTFTIKSDVWSFGILLTEIVTHGR 208

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 9/207 (4%)
Query: 497 ELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT 556
           E+   T    E LG G FG V+ G+ N      VAVK L      S   F AE N + Q 
Sbjct: 19  EVPRETLKLVERLGAGQFGEVWMGYYN--GHTKVAVKSLKQGSM-SPDAFLAEANLMKQL 75
Query: 557 HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFY 614
            H+ LVRL     + +   ++ E+M NG++  FL   S     +    ++A  IA G+ +
Sbjct: 76  QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 134
Query: 615 LHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEW 674
           + E      IH D++  NIL+ D  + +I+DFGLA+L+  ++       +    + APE 
Sbjct: 135 IEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 191
Query: 675 FRNMPITVKVDVYSYGVLLLEIICLRR 701
                 T+K DV+S+G+LL EI+   R
Sbjct: 192 INYGTFTIKSDVWSFGILLTEIVTHGR 218

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 137/292 (46%), Gaps = 27/292 (9%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNH--VAVKKLNSVFQDSEK-EFKAEVNG 552
           KEL        + +G G FG V  G + + S     VA+K L   + + ++ +F  E + 
Sbjct: 40  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 553 IGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFG-DSKPNWKLRTEIAMGIAGG 611
           +GQ  H N++RL G   + +  ++V E+M NG++ SFL   D++        +  GIA G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 612 LFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---G 668
           + YL +      +H D+  +NIL++ +   ++SDFGLA++L  D     T  RG K    
Sbjct: 160 MKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTT-RGGKIPIR 215
Query: 669 YVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTL 728
           + +PE       T   DV+SYG++L E++        E+S  D     D  Y        
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL------ 269
Query: 729 EALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
                     M+    L++ ++    C Q+D ++RP   ++  +L+ ++  P
Sbjct: 270 -------PPPMDCPAALYQLMLD---CWQKDRNNRPKFEQIVSILDKLIRNP 311

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 143/289 (49%), Gaps = 35/289 (12%)
Query: 489 NLRCFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA 548
           +L    YKE +EV    +E +GRGAFG V K       +  VA+K++ S  +   K F  
Sbjct: 2   SLHMIDYKE-IEV----EEVVGRGAFGVVCKA---KWRAKDVAIKQIES--ESERKAFIV 51
Query: 549 EVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFG-DSKPNWKLRTEIA-- 605
           E+  + + +H N+V+L G C       LV E+   G++ + L G +  P +     ++  
Sbjct: 52  ELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC 109
Query: 606 MGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNA-RISDFGLAKLLTLDQSHTNTAIR 664
           +  + G+ YLH      +IH D+KP N+LL       +I DFG A  +   Q+H  T  +
Sbjct: 110 LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHM-TNNK 165
Query: 665 GTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQ 724
           G+  ++APE F     + K DV+S+G++L E+I  R+  D EI     A    WA     
Sbjct: 166 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD-EIG--GPAFRIMWA---VH 219
Query: 725 ERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQML 773
             T   L++N  + +   +++ R       C  +DPS RP+M ++ +++
Sbjct: 220 NGTRPPLIKNLPKPIE--SLMTR-------CWSKDPSQRPSMEEIVKIM 259

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 141/290 (48%), Gaps = 34/290 (11%)
Query: 501 VTRGFKEELGRGAFGTVYKGFVNMGSSNH---VAVKKLNSVFQDSEK-EFKAEVNGIGQT 556
           VTR  ++ +G G FG VYKG +   S      VA+K L + + + ++ +F  E   +GQ 
Sbjct: 46  VTR--QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF 103
Query: 557 HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--GIAGGLFY 614
            H N++RL G   + +  +++ E+M NG +  FL  +    + +   + M  GIA G+ Y
Sbjct: 104 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFL-REKDGEFSVLQLVGMLRGIAAGMKY 162
Query: 615 LHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG--YVAP 672
           L        +H D+  +NIL++ +   ++SDFGL+++L  D   T T   G     + AP
Sbjct: 163 L---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAP 219
Query: 673 EWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEIS--KVDKAILTDWAYDRYQERTLEA 730
           E       T   DV+S+G+++ E++        E+S  +V KAI      D ++  T   
Sbjct: 220 EAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI-----NDGFRLPT--- 271
Query: 731 LVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
                   M+  + +++ +M    C Q++ + RP    +  +L+ ++  P
Sbjct: 272 -------PMDCPSAIYQLMM---QCWQQERARRPKFADIVSILDKLIRAP 311

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 102/207 (49%), Gaps = 9/207 (4%)
Query: 497 ELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT 556
           E+   T    E LG G FG V+ G+ N      VAVK L      S   F AE N + Q 
Sbjct: 4   EVPRETLKLVERLGAGQFGEVWMGYYN--GHTKVAVKSLKQGSM-SPDAFLAEANLMKQL 60
Query: 557 HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFY 614
            H+ LVRL     + +   ++ E+M NG++  FL   S     +    ++A  IA G+ +
Sbjct: 61  QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 119
Query: 615 LHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEW 674
           + E      IH D++  NIL+ D  + +I+DFGLA+L+  ++       +    + APE 
Sbjct: 120 IEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 176
Query: 675 FRNMPITVKVDVYSYGVLLLEIICLRR 701
                 T+K DV+S+G+LL EI+   R
Sbjct: 177 INYGTFTIKSDVWSFGILLTEIVTHGR 203

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 94.0 bits (232), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 141/289 (48%), Gaps = 35/289 (12%)
Query: 489 NLRCFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA 548
           +L    YKE +EV    +E +GRGAFG V K       +  VA+K++ S  +   K F  
Sbjct: 1   SLHMIDYKE-IEV----EEVVGRGAFGVVCKA---KWRAKDVAIKQIES--ESERKAFIV 50
Query: 549 EVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFG-DSKPNWKLRTEIA-- 605
           E+  + + +H N+V+L G C       LV E+   G++ + L G +  P +     ++  
Sbjct: 51  ELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC 108
Query: 606 MGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNA-RISDFGLAKLLTLDQSHTNTAIR 664
           +  + G+ YLH      +IH D+KP N+LL       +I DFG A  +   Q+H  T  +
Sbjct: 109 LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHM-TNNK 164
Query: 665 GTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQ 724
           G+  ++APE F     + K DV+S+G++L E+I  R+  D EI     A    WA     
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD-EIG--GPAFRIMWA---VH 218
Query: 725 ERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQML 773
             T   L++N  + + ++            C  +DPS RP+M ++ +++
Sbjct: 219 NGTRPPLIKNLPKPIESLMTR---------CWSKDPSQRPSMEEIVKIM 258

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 94.0 bits (232), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 137/292 (46%), Gaps = 27/292 (9%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNH--VAVKKLNSVFQDSEK-EFKAEVNG 552
           KEL        + +G G FG V  G + + S     VA+K L   + + ++ +F  E + 
Sbjct: 40  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 553 IGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFG-DSKPNWKLRTEIAMGIAGG 611
           +GQ  H N++RL G   + +  ++V E+M NG++ SFL   D++        +  GIA G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 612 LFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---G 668
           + YL +      +H D+  +NIL++ +   ++SDFGL+++L  D     T  RG K    
Sbjct: 160 MKYLSD---MGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-RGGKIPIR 215
Query: 669 YVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTL 728
           + +PE       T   DV+SYG++L E++        E+S  D     D  Y        
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP----- 270
Query: 729 EALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
                     M+    L++ ++    C Q+D ++RP   ++  +L+ ++  P
Sbjct: 271 --------PPMDCPAALYQLMLD---CWQKDRNNRPKFEQIVSILDKLIRNP 311

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 93.6 bits (231), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 137/292 (46%), Gaps = 27/292 (9%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNH--VAVKKLNSVFQDSEK-EFKAEVNG 552
           KEL        + +G G FG V  G + + S     VA+K L   + + ++ +F  E + 
Sbjct: 11  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 70
Query: 553 IGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFG-DSKPNWKLRTEIAMGIAGG 611
           +GQ  H N++RL G   + +  ++V E+M NG++ SFL   D++        +  GIA G
Sbjct: 71  MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 130
Query: 612 LFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---G 668
           + YL +      +H D+  +NIL++ +   ++SDFGL+++L  D     T  RG K    
Sbjct: 131 MKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-RGGKIPIR 186
Query: 669 YVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTL 728
           + +PE       T   DV+SYG++L E++        E+S  D     D  Y        
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL------ 240
Query: 729 EALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
                     M+    L++ ++    C Q+D ++RP   ++  +L+ ++  P
Sbjct: 241 -------PPPMDCPAALYQLMLD---CWQKDRNNRPKFEQIVSILDKLIRNP 282

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 93.6 bits (231), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 137/292 (46%), Gaps = 27/292 (9%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNH--VAVKKLNSVFQDSEK-EFKAEVNG 552
           KEL        + +G G FG V  G + + S     VA+K L   + + ++ +F  E + 
Sbjct: 28  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 87
Query: 553 IGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFG-DSKPNWKLRTEIAMGIAGG 611
           +GQ  H N++RL G   + +  ++V E+M NG++ SFL   D++        +  GIA G
Sbjct: 88  MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 147
Query: 612 LFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---G 668
           + YL +      +H D+  +NIL++ +   ++SDFGL+++L  D     T  RG K    
Sbjct: 148 MKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-RGGKIPIR 203
Query: 669 YVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTL 728
           + +PE       T   DV+SYG++L E++        E+S  D     D  Y        
Sbjct: 204 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP----- 258
Query: 729 EALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
                     M+    L++ ++    C Q+D ++RP   ++  +L+ ++  P
Sbjct: 259 --------PPMDCPAALYQLMLD---CWQKDRNNRPKFEQIVSILDKLIRNP 299

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 93.6 bits (231), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 144/313 (46%), Gaps = 42/313 (13%)
Query: 490 LRCF----TYKELVEVTRGFKEEL-----------GRGAFGTVYKGFVNMGSSNH--VAV 532
           LR F    TY++  +    F +EL           G G FG V  G + + S     VA+
Sbjct: 19  LRTFVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAI 78
Query: 533 KKLNSVFQDSEK-EFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLF 591
           K L   + + ++ +F  E + +GQ  H N++RL G   + +  ++V E+M NG++ SFL 
Sbjct: 79  KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR 138
Query: 592 G-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK 650
             D++        +  GIA G+ YL +      +H D+  +NIL++ +   ++SDFGL++
Sbjct: 139 KHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSR 195
Query: 651 LLTLDQSHTNTAIRGTK---GYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEI 707
           +L  D     T  RG K    + +PE       T   DV+SYG++L E++        E+
Sbjct: 196 VLEDDPEAAYTT-RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
Query: 708 SKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMR 767
           S  D     D  Y                  M+    L++ ++    C Q+D ++RP   
Sbjct: 255 SNQDVIKAVDEGYRL-------------PPPMDCPAALYQLMLD---CWQKDRNNRPKFE 298
Query: 768 KVTQMLEGVVEVP 780
           ++  +L+ ++  P
Sbjct: 299 QIVSILDKLIRNP 311

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 93.2 bits (230), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 137/292 (46%), Gaps = 27/292 (9%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNH--VAVKKLNSVFQDSEK-EFKAEVNG 552
           KEL        + +G G FG V  G + + S     VA+K L   + + ++ +F  E + 
Sbjct: 38  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 97
Query: 553 IGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFG-DSKPNWKLRTEIAMGIAGG 611
           +GQ  H N++RL G   + +  ++V E+M NG++ SFL   D++        +  GIA G
Sbjct: 98  MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 157
Query: 612 LFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---G 668
           + YL +      +H D+  +NIL++ +   ++SDFGL+++L  D     T  RG K    
Sbjct: 158 MKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-RGGKIPIR 213
Query: 669 YVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTL 728
           + +PE       T   DV+SYG++L E++        E+S  D     D  Y        
Sbjct: 214 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL------ 267
Query: 729 EALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
                     M+    L++ ++    C Q+D ++RP   ++  +L+ ++  P
Sbjct: 268 -------PPPMDCPAALYQLMLD---CWQKDRNNRPKFEQIVSILDKLIRNP 309

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 93.2 bits (230), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 137/292 (46%), Gaps = 27/292 (9%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNH--VAVKKLNSVFQDSEK-EFKAEVNG 552
           KEL        + +G G FG V  G + + S     VA+K L   + + ++ +F  E + 
Sbjct: 40  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 553 IGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFG-DSKPNWKLRTEIAMGIAGG 611
           +GQ  H N++RL G   + +  ++V E+M NG++ SFL   D++        +  GIA G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 612 LFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---G 668
           + YL +      +H D+  +NIL++ +   ++SDFGL+++L  D     T  RG K    
Sbjct: 160 MKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-RGGKIPIR 215
Query: 669 YVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTL 728
           + +PE       T   DV+SYG++L E++        E+S  D     D  Y        
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL------ 269
Query: 729 EALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
                     M+    L++ ++    C Q+D ++RP   ++  +L+ ++  P
Sbjct: 270 -------PPPMDCPAALYQLMLD---CWQKDRNNRPKFEQIVSILDKLIRNP 311

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 93.2 bits (230), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 137/292 (46%), Gaps = 27/292 (9%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNH--VAVKKLNSVFQDSEK-EFKAEVNG 552
           KEL        + +G G FG V  G + + S     VA+K L   + + ++ +F  E + 
Sbjct: 40  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 553 IGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFG-DSKPNWKLRTEIAMGIAGG 611
           +GQ  H N++RL G   + +  ++V E+M NG++ SFL   D++        +  GIA G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 612 LFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---G 668
           + YL +      +H D+  +NIL++ +   ++SDFGL+++L  D     T  RG K    
Sbjct: 160 MKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-RGGKIPIR 215
Query: 669 YVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTL 728
           + +PE       T   DV+SYG++L E++        E+S  D     D  Y        
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL------ 269
Query: 729 EALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
                     M+    L++ ++    C Q+D ++RP   ++  +L+ ++  P
Sbjct: 270 -------PPPMDCPAALYQLMLD---CWQKDRNNRPKFEQIVSILDKLIRNP 311

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 93.2 bits (230), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 137/292 (46%), Gaps = 27/292 (9%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNH--VAVKKLNSVFQDSEK-EFKAEVNG 552
           KEL        + +G G FG V  G + + S     VA+K L   + + ++ +F  E + 
Sbjct: 40  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 553 IGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFG-DSKPNWKLRTEIAMGIAGG 611
           +GQ  H N++RL G   + +  ++V E+M NG++ SFL   D++        +  GIA G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 612 LFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---G 668
           + YL +      +H D+  +NIL++ +   ++SDFGL+++L  D     T  RG K    
Sbjct: 160 MKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-RGGKIPIR 215
Query: 669 YVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTL 728
           + +PE       T   DV+SYG++L E++        E+S  D     D  Y        
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL------ 269
Query: 729 EALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
                     M+    L++ ++    C Q+D ++RP   ++  +L+ ++  P
Sbjct: 270 -------PPPMDCPAALYQLMLD---CWQKDRNNRPKFEQIVSILDKLIRNP 311

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 93.2 bits (230), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 136/292 (46%), Gaps = 27/292 (9%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNH--VAVKKLNSVFQDSEK-EFKAEVNG 552
           KEL        + +G G FG V  G + + S     VA+K L   + + ++ +F  E + 
Sbjct: 40  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 553 IGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFG-DSKPNWKLRTEIAMGIAGG 611
           +GQ  H N++RL G   + +  ++V E+M NG++ SFL   D++        +  GIA G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 612 LFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---G 668
           + YL +      +H D+  +NIL++ +   ++SDFGL ++L  D     T  RG K    
Sbjct: 160 MKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTT-RGGKIPIR 215
Query: 669 YVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTL 728
           + +PE       T   DV+SYG++L E++        E+S  D     D  Y        
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL------ 269
Query: 729 EALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
                     M+    L++ ++    C Q+D ++RP   ++  +L+ ++  P
Sbjct: 270 -------PPPMDCPAALYQLMLD---CWQKDRNNRPKFEQIVSILDKLIRNP 311

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 92.4 bits (228), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 102/207 (49%), Gaps = 9/207 (4%)
Query: 497 ELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT 556
           E+   T    E LG G FG V+ G+ N      VAVK L      S   F AE N + Q 
Sbjct: 5   EVPRETLKLVERLGAGQFGEVWMGYYN--GHTKVAVKSLKQGSM-SPDAFLAEANLMKQL 61
Query: 557 HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFY 614
            H+ LVRL     + +   ++ E+M NG++  FL   S     +    ++A  IA G+ +
Sbjct: 62  QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 120
Query: 615 LHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEW 674
           + E      IH +++  NIL+ D  + +I+DFGLA+L+  ++       +    + APE 
Sbjct: 121 IEER---NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEA 177
Query: 675 FRNMPITVKVDVYSYGVLLLEIICLRR 701
                 T+K DV+S+G+LL EI+   R
Sbjct: 178 INYGTFTIKSDVWSFGILLTEIVTHGR 204

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 135/286 (47%), Gaps = 31/286 (10%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH--VAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNL 561
            ++ +G G FG V  G + +       VA+K L S + + ++ +F +E + +GQ  H N+
Sbjct: 11  IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 70
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLF-GDSKPNWKLRTEIAMGIAGGLFYLHEECC 620
           + L G   +    +++ EFM NG++ SFL   D +        +  GIA G+ YL +   
Sbjct: 71  IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAD--- 127
Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH-TNTAIRGTK---GYVAPEWFR 676
              +H  +  +NIL++ +   ++SDFGL++ L  D S  T T+  G K    + APE  +
Sbjct: 128 MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 187
Query: 677 NMPITVKVDVYSYGVLLLEIICL--RRNIDNEISKVDKAILTDWAYDRYQERTLEALVEN 734
               T   DV+SYG+++ E++    R   D     V  AI  D+                
Sbjct: 188 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLP------------- 234
Query: 735 DLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
               M+  + LH+ ++    C Q+D +HRP   ++   L+ ++  P
Sbjct: 235 --PPMDCPSALHQLMLD---CWQKDRNHRPKFGQIVNTLDKMIRNP 275

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 136/292 (46%), Gaps = 27/292 (9%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNH--VAVKKLNSVFQDSEK-EFKAEVNG 552
           KEL        + +G G FG V  G + + S     VA+K L   + + ++ +F  E + 
Sbjct: 40  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 553 IGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFG-DSKPNWKLRTEIAMGIAGG 611
           +GQ  H N++RL G   + +  ++V E M NG++ SFL   D++        +  GIA G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 612 LFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---G 668
           + YL +      +H D+  +NIL++ +   ++SDFGL+++L  D     T  RG K    
Sbjct: 160 MKYLSDMGA---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-RGGKIPIR 215
Query: 669 YVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTL 728
           + +PE       T   DV+SYG++L E++        E+S  D     D  Y        
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP----- 270
Query: 729 EALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
                     M+    L++ ++    C Q+D ++RP   ++  +L+ ++  P
Sbjct: 271 --------PPMDCPAALYQLMLD---CWQKDRNNRPKFEQIVSILDKLIRNP 311

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 136/292 (46%), Gaps = 27/292 (9%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNH--VAVKKLNSVFQDSEK-EFKAEVNG 552
           KEL        + +G G FG V  G + + S     VA+K L   + + ++ +F  E + 
Sbjct: 11  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 70
Query: 553 IGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFG-DSKPNWKLRTEIAMGIAGG 611
           +GQ  H N++RL G   + +  ++V E M NG++ SFL   D++        +  GIA G
Sbjct: 71  MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 130
Query: 612 LFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---G 668
           + YL +      +H D+  +NIL++ +   ++SDFGL+++L  D     T  RG K    
Sbjct: 131 MKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-RGGKIPIR 186
Query: 669 YVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTL 728
           + +PE       T   DV+SYG++L E++        E+S  D     D  Y        
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLP----- 241
Query: 729 EALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
                     M+    L++ ++    C Q+D ++RP   ++  +L+ ++  P
Sbjct: 242 --------PPMDCPAALYQLMLD---CWQKDRNNRPKFEQIVSILDKLIRNP 282

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 130/286 (45%), Gaps = 31/286 (10%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH--VAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNL 561
            +E +G G FG V +G +         VA+K L   + + ++ EF +E + +GQ  H N+
Sbjct: 20  IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 79
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFL-FGDSKPNWKLRTEIAMGIAGGLFYLHEECC 620
           +RL G        +++ EFM NG + SFL   D +        +  GIA G+ YL E   
Sbjct: 80  IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAE--- 136
Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH-TNTAIRGTK---GYVAPEWFR 676
              +H D+  +NIL++ +   ++SDFGL++ L  + S  T T+  G K    + APE   
Sbjct: 137 MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIA 196
Query: 677 NMPITVKVDVYSYGVLLLEIICL--RRNIDNEISKVDKAILTDWAYDRYQERTLEALVEN 734
               T   D +SYG+++ E++    R   D     V  AI  D+                
Sbjct: 197 FRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLP------------- 243
Query: 735 DLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
                +  T LH+ ++    C Q+D + RP   +V   L+ ++  P
Sbjct: 244 --PPPDCPTSLHQLMLD---CWQKDRNARPRFPQVVSALDKMIRNP 284

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 136/292 (46%), Gaps = 27/292 (9%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNH--VAVKKLNSVFQDSEK-EFKAEVNG 552
           KEL        + +G G FG V  G + + S     VA+K L   + + ++ +F  E + 
Sbjct: 40  KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 553 IGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFG-DSKPNWKLRTEIAMGIAGG 611
           +GQ  H N++RL G   + +  ++V E M NG++ SFL   D++        +  GIA G
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASG 159
Query: 612 LFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---G 668
           + YL +      +H D+  +NIL++ +   ++SDFGL+++L  D     T  RG K    
Sbjct: 160 MKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-RGGKIPIR 215
Query: 669 YVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTL 728
           + +PE       T   DV+SYG++L E++        E+S  D     D  Y        
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL------ 269
Query: 729 EALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
                     M+    L++ ++    C Q+D ++RP   ++  +L+ ++  P
Sbjct: 270 -------PPPMDCPAALYQLMLD---CWQKDRNNRPKFEQIVSILDKLIRNP 311

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 148/330 (44%), Gaps = 66/330 (20%)
Query: 481 EDQGVSYMNLRCFTYKELVEVTRG---FKEELGRGAFGTVYK----GFVNMGSSNHVAVK 533
           E    ++++     Y E  E  R    F + LG GAFG V +    G     +   VAVK
Sbjct: 23  EGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVK 82
Query: 534 KLNSVFQDSEKE-FKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLF 591
            L S     EKE   +E+  +     H+N+V LLG C  G   L++ E+   G + +FL 
Sbjct: 83  MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR 142
Query: 592 GDSKPNWKLRTEIAMGIAG-----------------GLFYLHEECCTQIIHCDIKPQNIL 634
             S+    L T+ A  IA                  G+ +L  + C   IH D+  +N+L
Sbjct: 143 RKSR---VLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNC---IHRDVAARNVL 196
Query: 635 LDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK----GYVAPEWFRNMPITVKVDVYSYG 690
           L + + A+I DFGLA+ +  D   +N  ++G       ++APE   +   TV+ DV+SYG
Sbjct: 197 LTNGHVAKIGDFGLARDIMND---SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 253
Query: 691 VLLLEIICLRRN------IDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTM 744
           +LL EI  L  N      ++++  K+ K        D YQ     A    ++ +      
Sbjct: 254 ILLWEIFSLGLNPYPGILVNSKFYKLVK--------DGYQ-MAQPAFAPKNIYS------ 298
Query: 745 LHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
               +M A W +  +P+HRPT +++   L+
Sbjct: 299 ----IMQACWAL--EPTHRPTFQQICSFLQ 322

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 31/280 (11%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            K +LG G +G VY+G V    S  VAVK L     + E EF  E   + +  H NLV+L
Sbjct: 22  MKHKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 79
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFL--FGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           LG C       ++ EFM+ G +  +L      + N  +   +A  I+  + YL ++    
Sbjct: 80  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---N 136
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH D+  +N L+ +++  +++DFGL++L+T D    +   +    + APE       ++
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 683 KVDVYSYGVLLLEIICLRRN----IDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA 738
           K DV+++GVLL EI     +    ID  +S+V + +  D+  +R      E   E   E 
Sbjct: 197 KSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYRMER-----PEGCPEKVYEL 249
Query: 739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
           M               C Q +PS RP+  ++ Q  E + +
Sbjct: 250 MRA-------------CWQWNPSDRPSFAEIHQAFETMFQ 276

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 130/286 (45%), Gaps = 31/286 (10%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH--VAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNL 561
            +E +G G FG V +G +         VA+K L   + + ++ EF +E + +GQ  H N+
Sbjct: 18  IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 77
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFL-FGDSKPNWKLRTEIAMGIAGGLFYLHEECC 620
           +RL G        +++ EFM NG + SFL   D +        +  GIA G+ YL E   
Sbjct: 78  IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAE--- 134
Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH-TNTAIRGTK---GYVAPEWFR 676
              +H D+  +NIL++ +   ++SDFGL++ L  + S  T T+  G K    + APE   
Sbjct: 135 MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIA 194
Query: 677 NMPITVKVDVYSYGVLLLEIICL--RRNIDNEISKVDKAILTDWAYDRYQERTLEALVEN 734
               T   D +SYG+++ E++    R   D     V  AI  D+                
Sbjct: 195 FRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLP------------- 241
Query: 735 DLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
                +  T LH+ ++    C Q+D + RP   +V   L+ ++  P
Sbjct: 242 --PPPDCPTSLHQLMLD---CWQKDRNARPRFPQVVSALDKMIRNP 282

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 103/210 (49%), Gaps = 15/210 (7%)
Query: 497 ELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT 556
           E+   T    E LG G  G V+ G+ N      VAVK L      S   F AE N + Q 
Sbjct: 9   EVPRETLKLVERLGAGQAGEVWMGYYN--GHTKVAVKSLKQGSM-SPDAFLAEANLMKQL 65
Query: 557 HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFY 614
            H+ LVRL     + +   ++ E+M NG++  FL   S     +    ++A  IA G+ +
Sbjct: 66  QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 615 LHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVA 671
           + E      IH D++  NIL+ D  + +I+DFGLA+L+   +    TA  G K    + A
Sbjct: 125 IEER---NYIHRDLRAANILVSDTLSCKIADFGLARLI---EDAEXTAREGAKFPIKWTA 178
Query: 672 PEWFRNMPITVKVDVYSYGVLLLEIICLRR 701
           PE       T+K DV+S+G+LL EI+   R
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVTHGR 208

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 31/280 (11%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            K +LG G +G VY+G V    S  VAVK L     + E EF  E   + +  H NLV+L
Sbjct: 22  MKHKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 79
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFL--FGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           LG C       ++ EFM+ G +  +L      + N  +   +A  I+  + YL ++    
Sbjct: 80  LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---N 136
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH D+  +N L+ +++  +++DFGL++L+T D    +   +    + APE       ++
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 683 KVDVYSYGVLLLEIICLRRN----IDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA 738
           K DV+++GVLL EI     +    ID  +S+V + +  D+  +R      E   E   E 
Sbjct: 197 KSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYRMER-----PEGCPEKVYEL 249
Query: 739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
           M               C Q +PS RP+  ++ Q  E + +
Sbjct: 250 MRA-------------CWQWNPSDRPSFAEIHQAFETMFQ 276

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 31/280 (11%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            K +LG G +G VY+G V    S  VAVK L     + E EF  E   + +  H NLV+L
Sbjct: 18  MKHKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 75
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLF--GDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           LG C       ++ EFM+ G +  +L      + N  +   +A  I+  + YL ++    
Sbjct: 76  LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---N 132
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH D+  +N L+ +++  +++DFGL++L+T D    +   +    + APE       ++
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 192
Query: 683 KVDVYSYGVLLLEIICLRRN----IDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA 738
           K DV+++GVLL EI     +    ID  +S+V + +  D+  +R      E   E   E 
Sbjct: 193 KSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYRMER-----PEGCPEKVYEL 245
Query: 739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
           M               C Q +PS RP+  ++ Q  E + +
Sbjct: 246 MRA-------------CWQWNPSDRPSFAEIHQAFETMFQ 272

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 148/330 (44%), Gaps = 66/330 (20%)
Query: 481 EDQGVSYMNLRCFTYKELVEVTRG---FKEELGRGAFGTVYK----GFVNMGSSNHVAVK 533
           E    ++++     Y E  E  R    F + LG GAFG V +    G     +   VAVK
Sbjct: 23  EGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVK 82
Query: 534 KLNSVFQDSEKE-FKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLF 591
            L S     EKE   +E+  +     H+N+V LLG C  G   L++ E+   G + +FL 
Sbjct: 83  MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR 142
Query: 592 GDSKPNWKLRTEIAMGIAG-----------------GLFYLHEECCTQIIHCDIKPQNIL 634
             S+    L T+ A  IA                  G+ +L  + C   IH D+  +N+L
Sbjct: 143 RKSR---VLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNC---IHRDVAARNVL 196
Query: 635 LDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK----GYVAPEWFRNMPITVKVDVYSYG 690
           L + + A+I DFGLA+ +  D   +N  ++G       ++APE   +   TV+ DV+SYG
Sbjct: 197 LTNGHVAKIGDFGLARDIMND---SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 253
Query: 691 VLLLEIICLRRN------IDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTM 744
           +LL EI  L  N      ++++  K+ K        D YQ       +     A  N+  
Sbjct: 254 ILLWEIFSLGLNPYPGILVNSKFYKLVK--------DGYQ-------MAQPAFAPKNIYS 298
Query: 745 LHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
               +M A W +  +P+HRPT +++   L+
Sbjct: 299 ----IMQACWAL--EPTHRPTFQQICSFLQ 322

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 31/280 (11%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            K +LG G +G VY+G V    S  VAVK L     + E EF  E   + +  H NLV+L
Sbjct: 22  MKHKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 79
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFL--FGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           LG C       ++ EFM+ G +  +L      + N  +   +A  I+  + YL ++    
Sbjct: 80  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---N 136
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH D+  +N L+ +++  +++DFGL++L+T D    +   +    + APE       ++
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 683 KVDVYSYGVLLLEIICLRRN----IDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA 738
           K DV+++GVLL EI     +    ID  +S+V + +  D+  +R      E   E   E 
Sbjct: 197 KSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYRMER-----PEGCPEKVYEL 249
Query: 739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
           M               C Q +PS RP+  ++ Q  E + +
Sbjct: 250 MRA-------------CWQWNPSDRPSFAEIHQAFETMFQ 276

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 11/201 (5%)
Query: 505 FKEELGRGAFGTVYKGFV--NMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKNL 561
           F E +GRG FG VY G +  N G   H AVK LN +    E  +F  E   +    H N+
Sbjct: 93  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 152
Query: 562 VRLLGYCDEGQNR-LLVYEFMSNGTVASFLFGDSK-PNWKLRTEIAMGIAGGLFYLHEEC 619
           + LLG C   +   L+V  +M +G + +F+  ++  P  K      + +A G+ +L    
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 209
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLL---TLDQSHTNTAIRGTKGYVAPEWFR 676
             + +H D+  +N +LD+ +  +++DFGLA+ +     D  H  T  +    ++A E  +
Sbjct: 210 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 269
Query: 677 NMPITVKVDVYSYGVLLLEII 697
               T K DV+S+GVLL E++
Sbjct: 270 TQKFTTKSDVWSFGVLLWELM 290

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 90.9 bits (224), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 149/324 (45%), Gaps = 58/324 (17%)
Query: 481 EDQGVSYMNLRCFTYKELVEVTRG---FKEELGRGAFGTVYK----GFVNMGSSNHVAVK 533
           E    ++++     Y E  E  R    F + LG GAFG V +    G     +   VAVK
Sbjct: 15  EGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVK 74
Query: 534 KLNSVFQDSEKE-FKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLF 591
            L S     EKE   +E+  +     H+N+V LLG C  G   L++ E+   G + +FL 
Sbjct: 75  MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR 134
Query: 592 ---------GDSKPNWKLR--TEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYN 640
                     D +P  +LR     +  +A G+ +L  + C   IH D+  +N+LL + + 
Sbjct: 135 RKAEADLDKEDGRP-LELRDLLHFSSQVAQGMAFLASKNC---IHRDVAARNVLLTNGHV 190
Query: 641 ARISDFGLAKLLTLDQSHTNTAIRGTK----GYVAPEWFRNMPITVKVDVYSYGVLLLEI 696
           A+I DFGLA+ +  D   +N  ++G       ++APE   +   TV+ DV+SYG+LL EI
Sbjct: 191 AKIGDFGLARDIMND---SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 247
Query: 697 ICLRRN------IDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVM 750
             L  N      ++++  K+ K        D YQ       +     A  N+      +M
Sbjct: 248 FSLGLNPYPGILVNSKFYKLVK--------DGYQ-------MAQPAFAPKNIYS----IM 288
Query: 751 VAFWCIQEDPSHRPTMRKVTQMLE 774
            A W +  +P+HRPT +++   L+
Sbjct: 289 QACWAL--EPTHRPTFQQICSFLQ 310

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 90.9 bits (224), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 31/280 (11%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            K +LG G +G VY+G V    S  VAVK L     + E EF  E   + +  H NLV+L
Sbjct: 21  MKHKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 78
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFL--FGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           LG C       ++ EFM+ G +  +L      + N  +   +A  I+  + YL ++    
Sbjct: 79  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---N 135
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH D+  +N L+ +++  +++DFGL++L+T D    +   +    + APE       ++
Sbjct: 136 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 195
Query: 683 KVDVYSYGVLLLEIICLRRN----IDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA 738
           K DV+++GVLL EI     +    ID  +S+V + +  D+  +R      E   E   E 
Sbjct: 196 KSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYRMER-----PEGCPEKVYEL 248
Query: 739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
           M               C Q +PS RP+  ++ Q  E + +
Sbjct: 249 MRA-------------CWQWNPSDRPSFAEIHQAFETMFQ 275

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 90.9 bits (224), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 11/201 (5%)
Query: 505 FKEELGRGAFGTVYKGFV--NMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKNL 561
           F E +GRG FG VY G +  N G   H AVK LN +    E  +F  E   +    H N+
Sbjct: 35  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 562 VRLLGYCDEGQNR-LLVYEFMSNGTVASFLFGDSK-PNWKLRTEIAMGIAGGLFYLHEEC 619
           + LLG C   +   L+V  +M +G + +F+  ++  P  K      + +A G+ +L    
Sbjct: 95  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 151
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLL---TLDQSHTNTAIRGTKGYVAPEWFR 676
             + +H D+  +N +LD+ +  +++DFGLA+ +     D  H  T  +    ++A E  +
Sbjct: 152 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 677 NMPITVKVDVYSYGVLLLEII 697
               T K DV+S+GVLL E++
Sbjct: 212 TQKFTTKSDVWSFGVLLWELM 232

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 90.9 bits (224), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 27/212 (12%)
Query: 508 ELGRGAFGTVY----KGFVNMGSSNHVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLV 562
           ELG+G+FG VY    KG V       VA+K +N      E+ EF  E + + + +  ++V
Sbjct: 17  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 76
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFG----------DSKPNWKLRTEIAMGIAGGL 612
           RLLG   +GQ  L++ E M+ G + S+L             + P+     ++A  IA G+
Sbjct: 77  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG---- 668
            YL+     + +H D+  +N ++ + +  +I DFG    +T D   T+   +G KG    
Sbjct: 137 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIXETDXXRKGGKGLLPV 189
Query: 669 -YVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
            +++PE  ++   T   DV+S+GV+L EI  L
Sbjct: 190 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 221

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 11/201 (5%)
Query: 505 FKEELGRGAFGTVYKGFV--NMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKNL 561
           F E +GRG FG VY G +  N G   H AVK LN +    E  +F  E   +    H N+
Sbjct: 32  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 562 VRLLGYCDEGQNR-LLVYEFMSNGTVASFLFGDSK-PNWKLRTEIAMGIAGGLFYLHEEC 619
           + LLG C   +   L+V  +M +G + +F+  ++  P  K      + +A G+ +L    
Sbjct: 92  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 148
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLL---TLDQSHTNTAIRGTKGYVAPEWFR 676
             + +H D+  +N +LD+ +  +++DFGLA+ +     D  H  T  +    ++A E  +
Sbjct: 149 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 208
Query: 677 NMPITVKVDVYSYGVLLLEII 697
               T K DV+S+GVLL E++
Sbjct: 209 TQKFTTKSDVWSFGVLLWELM 229

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 11/201 (5%)
Query: 505 FKEELGRGAFGTVYKGFV--NMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKNL 561
           F E +GRG FG VY G +  N G   H AVK LN +    E  +F  E   +    H N+
Sbjct: 35  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 562 VRLLGYCDEGQNR-LLVYEFMSNGTVASFLFGDSK-PNWKLRTEIAMGIAGGLFYLHEEC 619
           + LLG C   +   L+V  +M +G + +F+  ++  P  K      + +A G+ +L    
Sbjct: 95  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 151
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT---LDQSHTNTAIRGTKGYVAPEWFR 676
             + +H D+  +N +LD+ +  +++DFGLA+ +     D  H  T  +    ++A E  +
Sbjct: 152 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 677 NMPITVKVDVYSYGVLLLEII 697
               T K DV+S+GVLL E++
Sbjct: 212 TQKFTTKSDVWSFGVLLWELM 232

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 11/201 (5%)
Query: 505 FKEELGRGAFGTVYKGFV--NMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKNL 561
           F E +GRG FG VY G +  N G   H AVK LN +    E  +F  E   +    H N+
Sbjct: 34  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 562 VRLLGYCDEGQNR-LLVYEFMSNGTVASFLFGDSK-PNWKLRTEIAMGIAGGLFYLHEEC 619
           + LLG C   +   L+V  +M +G + +F+  ++  P  K      + +A G+ +L    
Sbjct: 94  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 150
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLL---TLDQSHTNTAIRGTKGYVAPEWFR 676
             + +H D+  +N +LD+ +  +++DFGLA+ +     D  H  T  +    ++A E  +
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 677 NMPITVKVDVYSYGVLLLEII 697
               T K DV+S+GVLL E++
Sbjct: 211 TQKFTTKSDVWSFGVLLWELM 231

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 31/280 (11%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            K +LG G +G VY+G V    S  VAVK L     + E EF  E   + +  H NLV+L
Sbjct: 17  MKHKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 74
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFL--FGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           LG C       ++ EFM+ G +  +L      + N  +   +A  I+  + YL ++    
Sbjct: 75  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---N 131
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH D+  +N L+ +++  +++DFGL++L+T D    +   +    + APE       ++
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 683 KVDVYSYGVLLLEIICLRRN----IDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA 738
           K DV+++GVLL EI     +    ID  +S+V + +  D+  +R      E   E   E 
Sbjct: 192 KSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYRMER-----PEGCPEKVYEL 244
Query: 739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
           M               C Q +PS RP+  ++ Q  E + +
Sbjct: 245 MRA-------------CWQWNPSDRPSFAEIHQAFETMFQ 271

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 136/291 (46%), Gaps = 51/291 (17%)
Query: 508 ELGRGAFGTVYKG----FVNMGSSNHVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLV 562
           ELG+G+FG VY+G     +   +   VAVK +N      E+ EF  E + +      ++V
Sbjct: 24  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLF----------GDSKPNWKLRTEIAMGIAGGL 612
           RLLG   +GQ  L+V E M++G + S+L           G   P  +   ++A  IA G+
Sbjct: 84  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG---- 668
            YL+     + +H D+  +N ++   +  +I DFG    +T D   T+   +G KG    
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFG----MTRDIXETDXXRKGGKGLLPV 196
Query: 669 -YVAPEWFRNMPITVKVDVYSYGVLLLEIICLR----RNIDNEISKVDKAILTDWAYDRY 723
            ++APE  ++   T   D++S+GV+L EI  L     + + NE  +V K ++ D  Y   
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE--QVLKFVM-DGGYLDQ 253
Query: 724 QERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
            +   E            VT L R       C Q +P+ RPT  ++  +L+
Sbjct: 254 PDNCPE-----------RVTDLMRM------CWQFNPNMRPTFLEIVNLLK 287

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 11/201 (5%)
Query: 505 FKEELGRGAFGTVYKGFV--NMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKNL 561
           F E +GRG FG VY G +  N G   H AVK LN +    E  +F  E   +    H N+
Sbjct: 34  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 562 VRLLGYCDEGQNR-LLVYEFMSNGTVASFLFGDSK-PNWKLRTEIAMGIAGGLFYLHEEC 619
           + LLG C   +   L+V  +M +G + +F+  ++  P  K      + +A G+ +L    
Sbjct: 94  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 150
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLL---TLDQSHTNTAIRGTKGYVAPEWFR 676
             + +H D+  +N +LD+ +  +++DFGLA+ +     D  H  T  +    ++A E  +
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 677 NMPITVKVDVYSYGVLLLEII 697
               T K DV+S+GVLL E++
Sbjct: 211 TQKFTTKSDVWSFGVLLWELM 231

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 11/201 (5%)
Query: 505 FKEELGRGAFGTVYKGFV--NMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKNL 561
           F E +GRG FG VY G +  N G   H AVK LN +    E  +F  E   +    H N+
Sbjct: 39  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 98
Query: 562 VRLLGYCDEGQNR-LLVYEFMSNGTVASFLFGDSK-PNWKLRTEIAMGIAGGLFYLHEEC 619
           + LLG C   +   L+V  +M +G + +F+  ++  P  K      + +A G+ +L    
Sbjct: 99  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 155
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLL---TLDQSHTNTAIRGTKGYVAPEWFR 676
             + +H D+  +N +LD+ +  +++DFGLA+ +     D  H  T  +    ++A E  +
Sbjct: 156 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 215
Query: 677 NMPITVKVDVYSYGVLLLEII 697
               T K DV+S+GVLL E++
Sbjct: 216 TQKFTTKSDVWSFGVLLWELM 236

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 129/276 (46%), Gaps = 31/276 (11%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            K +LG G +G VY+G V    S  VAVK L     + E EF  E   + +  H NLV+L
Sbjct: 17  MKHKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 74
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFL--FGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           LG C       ++ EFM+ G +  +L      + N  +   +A  I+  + YL ++    
Sbjct: 75  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---N 131
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH D+  +N L+ +++  +++DFGL++L+T D    +   +    + APE       ++
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 683 KVDVYSYGVLLLEIICLRRN----IDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA 738
           K DV+++GVLL EI     +    ID  +S+V + +  D+  +R      E   E   E 
Sbjct: 192 KSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYRMER-----PEGCPEKVYEL 244
Query: 739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
           M               C Q +PS RP+  ++ Q  E
Sbjct: 245 MRA-------------CWQWNPSDRPSFAEIHQAFE 267

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 133/280 (47%), Gaps = 33/280 (11%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           F +E+G G FG V+ G+    + + VA+K +      SE++F  E   + +  H  LV+L
Sbjct: 14  FVQEIGSGQFGLVHLGY--WLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQL 70
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--GIAGGLFYLHEECCTQ 622
            G C E     LV+EFM +G ++ +L    +  +   T + M   +  G+ YL E C   
Sbjct: 71  YGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEAC--- 126
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +IH D+  +N L+ ++   ++SDFG+ + +  DQ  ++T  +    + +PE F     + 
Sbjct: 127 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 186
Query: 683 KVDVYSYGVLLLEIICLRR----NIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA 738
           K DV+S+GVL+ E+    +    N  N  S+V + I T   +  Y+ R     V    + 
Sbjct: 187 KSDVWSFGVLMWEVFSEGKIPYENRSN--SEVVEDIST--GFRLYKPRLASTHV---YQI 239
Query: 739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
           MN+             C +E P  RP   ++ + L  + E
Sbjct: 240 MNH-------------CWRERPEDRPAFSRLLRQLAEIAE 266

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 27/212 (12%)
Query: 508 ELGRGAFGTVY----KGFVNMGSSNHVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLV 562
           ELG+G+FG VY    KG V       VA+K +N      E+ EF  E + + + +  ++V
Sbjct: 26  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFG----------DSKPNWKLRTEIAMGIAGGL 612
           RLLG   +GQ  L++ E M+ G + S+L             + P+     ++A  IA G+
Sbjct: 86  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG---- 668
            YL+     + +H D+  +N ++ + +  +I DFG    +T D   T+   +G KG    
Sbjct: 146 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIXETDXXRKGGKGLLPV 198
Query: 669 -YVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
            +++PE  ++   T   DV+S+GV+L EI  L
Sbjct: 199 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 230

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 149/324 (45%), Gaps = 58/324 (17%)
Query: 481 EDQGVSYMNLRCFTYKELVEVTRG---FKEELGRGAFGTVYK----GFVNMGSSNHVAVK 533
           E    ++++     Y E  E  R    F + LG GAFG V +    G     +   VAVK
Sbjct: 23  EGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVK 82
Query: 534 KLNSVFQDSEKE-FKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLF 591
            L S     EKE   +E+  +     H+N+V LLG C  G   L++ E+   G + +FL 
Sbjct: 83  MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR 142
Query: 592 ---------GDSKPNWKLR--TEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYN 640
                     D +P  +LR     +  +A G+ +L  + C   IH D+  +N+LL + + 
Sbjct: 143 RKAEADLDKEDGRP-LELRDLLHFSSQVAQGMAFLASKNC---IHRDVAARNVLLTNGHV 198
Query: 641 ARISDFGLAKLLTLDQSHTNTAIRGTK----GYVAPEWFRNMPITVKVDVYSYGVLLLEI 696
           A+I DFGLA+ +  D   +N  ++G       ++APE   +   TV+ DV+SYG+LL EI
Sbjct: 199 AKIGDFGLARDIMND---SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 255
Query: 697 ICLRRN------IDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVM 750
             L  N      ++++  K+ K        D YQ       +     A  N+      +M
Sbjct: 256 FSLGLNPYPGILVNSKFYKLVK--------DGYQ-------MAQPAFAPKNIYS----IM 296
Query: 751 VAFWCIQEDPSHRPTMRKVTQMLE 774
            A W ++  P+HRPT +++   L+
Sbjct: 297 QACWALE--PTHRPTFQQICSFLQ 318

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 90.5 bits (223), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 135/291 (46%), Gaps = 51/291 (17%)
Query: 508 ELGRGAFGTVYKG----FVNMGSSNHVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLV 562
           ELG+G+FG VY+G     +   +   VAVK +N      E+ EF  E + +      ++V
Sbjct: 21  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLF----------GDSKPNWKLRTEIAMGIAGGL 612
           RLLG   +GQ  L+V E M++G + S+L           G   P  +   ++A  IA G+
Sbjct: 81  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG---- 668
            YL+     + +H D+  +N ++   +  +I DFG    +T D   T+   +G KG    
Sbjct: 141 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFG----MTRDIXETDXXRKGGKGLLPV 193
Query: 669 -YVAPEWFRNMPITVKVDVYSYGVLLLEIICLR----RNIDNEISKVDKAILTDWAYDRY 723
            ++APE  ++   T   D++S+GV+L EI  L     + + NE  +V K ++ D  Y   
Sbjct: 194 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE--QVLKFVM-DGGYLDQ 250
Query: 724 QERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
            +   E            VT L R       C Q +P  RPT  ++  +L+
Sbjct: 251 PDNCPE-----------RVTDLMRM------CWQFNPKMRPTFLEIVNLLK 284

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 90.5 bits (223), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 135/291 (46%), Gaps = 51/291 (17%)
Query: 508 ELGRGAFGTVYKG----FVNMGSSNHVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLV 562
           ELG+G+FG VY+G     +   +   VAVK +N      E+ EF  E + +      ++V
Sbjct: 24  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLF----------GDSKPNWKLRTEIAMGIAGGL 612
           RLLG   +GQ  L+V E M++G + S+L           G   P  +   ++A  IA G+
Sbjct: 84  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG---- 668
            YL+     + +H D+  +N ++   +  +I DFG    +T D   T+   +G KG    
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFG----MTRDIXETDXXRKGGKGLLPV 196
Query: 669 -YVAPEWFRNMPITVKVDVYSYGVLLLEIICLR----RNIDNEISKVDKAILTDWAYDRY 723
            ++APE  ++   T   D++S+GV+L EI  L     + + NE  +V K ++ D  Y   
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE--QVLKFVM-DGGYLDQ 253
Query: 724 QERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
            +   E            VT L R       C Q +P  RPT  ++  +L+
Sbjct: 254 PDNCPE-----------RVTDLMRM------CWQFNPKMRPTFLEIVNLLK 287

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 90.5 bits (223), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 31/280 (11%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            K +LG G +G VY+G V    S  VAVK L     + E EF  E   + +  H NLV+L
Sbjct: 30  MKHKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 87
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLF--GDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           LG C       ++ EFM+ G +  +L      + N  +   +A  I+  + YL ++    
Sbjct: 88  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---N 144
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH D+  +N L+ +++  +++DFGL++L+T D    +   +    + APE       ++
Sbjct: 145 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 204
Query: 683 KVDVYSYGVLLLEIICLRRN----IDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA 738
           K DV+++GVLL EI     +    ID  +S+V + +  D+  +R      E   E   E 
Sbjct: 205 KSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYRMER-----PEGCPEKVYEL 257
Query: 739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
           M               C Q +PS RP+  ++ Q  E + +
Sbjct: 258 MRA-------------CWQWNPSDRPSFAEIHQAFETMFQ 284

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 90.5 bits (223), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 31/280 (11%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            K +LG G +G VY+G V    S  VAVK L     + E EF  E   + +  H NLV+L
Sbjct: 22  MKHKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 79
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLF--GDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           LG C       ++ EFM+ G +  +L      + N  +   +A  I+  + YL ++    
Sbjct: 80  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---N 136
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH D+  +N L+ +++  +++DFGL++L+T D    +   +    + APE       ++
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 683 KVDVYSYGVLLLEIICLRRN----IDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA 738
           K DV+++GVLL EI     +    ID  +S+V + +  D+  +R      E   E   E 
Sbjct: 197 KSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYRMER-----PEGCPEKVYEL 249
Query: 739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
           M               C Q +PS RP+  ++ Q  E + +
Sbjct: 250 MRA-------------CWQWNPSDRPSFAEIHQAFETMFQ 276

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 90.1 bits (222), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 134/283 (47%), Gaps = 37/283 (13%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            K +LG G +G VY+G V    S  VAVK L     + E EF  E   + +  H NLV+L
Sbjct: 18  MKHKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 75
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLF--GDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           LG C       ++ EFM+ G +  +L      + N  +   +A  I+  + YL ++    
Sbjct: 76  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---N 132
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMP 679
            IH D+  +N L+ +++  +++DFGL++L+T D   T TA  G K    + APE      
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAPAGAKFPIKWTAPESLAYNK 189
Query: 680 ITVKVDVYSYGVLLLEIICLRRN----IDNEISKVDKAILTDWAYDRYQERTLEALVEND 735
            ++K DV+++GVLL EI     +    ID  +S+V + +  D+  +R      E   E  
Sbjct: 190 FSIKSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYRMER-----PEGCPEKV 242
Query: 736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
            E M               C Q +PS RP+  ++ Q  E + +
Sbjct: 243 YELMRA-------------CWQWNPSDRPSFAEIHQAFETMFQ 272

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 90.1 bits (222), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 133/280 (47%), Gaps = 33/280 (11%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           F +E+G G FG V+ G+    + + VA+K +      SE++F  E   + +  H  LV+L
Sbjct: 11  FVQEIGSGQFGLVHLGY--WLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQL 67
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--GIAGGLFYLHEECCTQ 622
            G C E     LV+EFM +G ++ +L    +  +   T + M   +  G+ YL E C   
Sbjct: 68  YGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEAC--- 123
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +IH D+  +N L+ ++   ++SDFG+ + +  DQ  ++T  +    + +PE F     + 
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 183
Query: 683 KVDVYSYGVLLLEIICLRR----NIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA 738
           K DV+S+GVL+ E+    +    N  N  S+V + I T   +  Y+ R     V    + 
Sbjct: 184 KSDVWSFGVLMWEVFSEGKIPYENRSN--SEVVEDIST--GFRLYKPRLASTHV---YQI 236
Query: 739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
           MN+             C +E P  RP   ++ + L  + E
Sbjct: 237 MNH-------------CWKERPEDRPAFSRLLRQLAEIAE 263

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 90.1 bits (222), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 134/283 (47%), Gaps = 37/283 (13%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            K +LG G +G VY+G V    S  VAVK L     + E EF  E   + +  H NLV+L
Sbjct: 19  MKHKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 76
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLF--GDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           LG C       ++ EFM+ G +  +L      + N  +   +A  I+  + YL ++    
Sbjct: 77  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---N 133
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMP 679
            IH D+  +N L+ +++  +++DFGL++L+T D   T TA  G K    + APE      
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD---TYTAPAGAKFPIKWTAPESLAYNK 190
Query: 680 ITVKVDVYSYGVLLLEIICLRRN----IDNEISKVDKAILTDWAYDRYQERTLEALVEND 735
            ++K DV+++GVLL EI     +    ID  +S+V + +  D+  +R      E   E  
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYRMER-----PEGCPEKV 243
Query: 736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
            E M               C Q +PS RP+  ++ Q  E + +
Sbjct: 244 YELMRA-------------CWQWNPSDRPSFAEIHQAFETMFQ 273

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 90.1 bits (222), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 31/280 (11%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            K +LG G +G VY+G V    S  VAVK L     + E EF  E   + +  H NLV+L
Sbjct: 19  MKHKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 76
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLF--GDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           LG C       ++ EFM+ G +  +L      + N  +   +A  I+  + YL ++    
Sbjct: 77  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---N 133
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH D+  +N L+ +++  +++DFGL++L+T D    +   +    + APE       ++
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 193
Query: 683 KVDVYSYGVLLLEIICLRRN----IDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA 738
           K DV+++GVLL EI     +    ID  +S+V + +  D+  +R      E   E   E 
Sbjct: 194 KSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYRMER-----PEGCPEKVYEL 246
Query: 739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
           M               C Q +PS RP+  ++ Q  E + +
Sbjct: 247 MRA-------------CWQWNPSDRPSFAEIHQAFETMFQ 273

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 90.1 bits (222), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 133/280 (47%), Gaps = 33/280 (11%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           F +E+G G FG V+ G+    + + VA+K +      SE++F  E   + +  H  LV+L
Sbjct: 9   FVQEIGSGQFGLVHLGY--WLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQL 65
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--GIAGGLFYLHEECCTQ 622
            G C E     LV+EFM +G ++ +L    +  +   T + M   +  G+ YL E C   
Sbjct: 66  YGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEAC--- 121
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +IH D+  +N L+ ++   ++SDFG+ + +  DQ  ++T  +    + +PE F     + 
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 181
Query: 683 KVDVYSYGVLLLEIICLRR----NIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA 738
           K DV+S+GVL+ E+    +    N  N  S+V + I T   +  Y+ R     V    + 
Sbjct: 182 KSDVWSFGVLMWEVFSEGKIPYENRSN--SEVVEDIST--GFRLYKPRLASTHV---YQI 234
Query: 739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
           MN+             C +E P  RP   ++ + L  + E
Sbjct: 235 MNH-------------CWKERPEDRPAFSRLLRQLAEIAE 261

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 90.1 bits (222), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 31/280 (11%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            K +LG G +G VY+G V    S  VAVK L     + E EF  E   + +  H NLV+L
Sbjct: 19  MKHKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 76
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLF--GDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           LG C       ++ EFM+ G +  +L      + N  +   +A  I+  + YL ++    
Sbjct: 77  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---N 133
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH D+  +N L+ +++  +++DFGL++L+T D    +   +    + APE       ++
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 193
Query: 683 KVDVYSYGVLLLEIICLRRN----IDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA 738
           K DV+++GVLL EI     +    ID  +S+V + +  D+  +R      E   E   E 
Sbjct: 194 KSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYRMER-----PEGCPEKVYEL 246
Query: 739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
           M               C Q +PS RP+  ++ Q  E + +
Sbjct: 247 MRA-------------CWQWNPSDRPSFAEIHQAFETMFQ 273

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 89.4 bits (220), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 125/276 (45%), Gaps = 23/276 (8%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            K +LG G FG VY+G V    S  VAVK L     + E EF  E   + +  H NLV+L
Sbjct: 15  MKHKLGGGQFGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 72
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG--IAGGLFYLHEECCTQ 622
           LG C       ++ EFM+ G +  +L   ++        + M   I+  + YL ++    
Sbjct: 73  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---N 129
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH D+  +N L+ +++  +++DFGL++L+T D    +   +    + APE       ++
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 683 KVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV 742
           K DV+++GVLL EI        +    +D + + +     Y+    E   E   E M   
Sbjct: 190 KSDVWAFGVLLWEIATYGM---SPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRA- 245
Query: 743 TMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
                       C Q +PS RP+  ++ Q  E + +
Sbjct: 246 ------------CWQWNPSDRPSFAEIHQAFETMFQ 269

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 89.4 bits (220), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 145/329 (44%), Gaps = 62/329 (18%)
Query: 481 EDQGVSYMNLRCFTYKELVEVTRG---FKEELGRGAFGTVYK----GFVNMGSSNHVAVK 533
           E    ++++     Y E  E  R    F + LG GAFG V +    G     +   VAVK
Sbjct: 23  EGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVK 82
Query: 534 KLNSVFQDSEKE-FKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLF 591
            L S     EKE   +E+  +     H+N+V LLG C  G   L++ E+   G + +FL 
Sbjct: 83  MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR 142
Query: 592 GDSKPNWKLR----------------TEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILL 635
               P  +                     +  +A G+ +L  + C   IH D+  +N+LL
Sbjct: 143 RKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNC---IHRDVAARNVLL 199
Query: 636 DDHYNARISDFGLAKLLTLDQSHTNTAIRGTK----GYVAPEWFRNMPITVKVDVYSYGV 691
            + + A+I DFGLA+ +  D   +N  ++G       ++APE   +   TV+ DV+SYG+
Sbjct: 200 TNGHVAKIGDFGLARDIMND---SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 256
Query: 692 LLLEIICLRRN------IDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTML 745
           LL EI  L  N      ++++  K+ K        D YQ       +     A  N+   
Sbjct: 257 LLWEIFSLGLNPYPGILVNSKFYKLVK--------DGYQ-------MAQPAFAPKNIYS- 300
Query: 746 HRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
              +M A W +  +P+HRPT +++   L+
Sbjct: 301 ---IMQACWAL--EPTHRPTFQQICSFLQ 324

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 89.4 bits (220), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 101/201 (50%), Gaps = 11/201 (5%)
Query: 505 FKEELGRGAFGTVYKGFV--NMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKNL 561
           F E +GRG FG VY G +  N G   H AVK LN +    E  +F  E   +    H N+
Sbjct: 33  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 562 VRLLGYCDEGQNR-LLVYEFMSNGTVASFLFGDSK-PNWKLRTEIAMGIAGGLFYLHEEC 619
           + LLG C   +   L+V  +M +G + +F+  ++  P  K      + +A G+ YL    
Sbjct: 93  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 149
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLL---TLDQSHTNTAIRGTKGYVAPEWFR 676
             + +H D+  +N +LD+ +  +++DFGLA+ +        H  T  +    ++A E  +
Sbjct: 150 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQ 209
Query: 677 NMPITVKVDVYSYGVLLLEII 697
               T K DV+S+GVLL E++
Sbjct: 210 TQKFTTKSDVWSFGVLLWELM 230

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 89.0 bits (219), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 141/308 (45%), Gaps = 42/308 (13%)
Query: 493 FTYKELVEVTRGFKEEL-----------GRGAFGTVYKGFVNMGSSNH--VAVKKLNSVF 539
           FT+++  +  R F +E+           G G FG V  G + +       VA+K L + +
Sbjct: 10  FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 540 QDSEK-EFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLF-GDSKPN 597
            D ++ +F +E + +GQ  H N++ L G   + +  +++ E+M NG++ +FL   D +  
Sbjct: 70  TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT 129
Query: 598 WKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS 657
                 +  GI  G+ YL +      +H D+  +NIL++ +   ++SDFG++++L  D  
Sbjct: 130 VIQLVGMLRGIGSGMKYLSD---MSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPE 186
Query: 658 HTNTAIRGTK---GYVAPEWFRNMPITVKVDVYSYGVLLLEIICL--RRNIDNEISKVDK 712
              T  RG K    + APE       T   DV+SYG+++ E++    R   D     V K
Sbjct: 187 AAYTT-RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIK 245
Query: 713 AILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM 772
           AI   +                    M+    LH+ ++    C Q++ S RP   ++  M
Sbjct: 246 AIEEGYRLP---------------PPMDCPIALHQLMLD---CWQKERSDRPKFGQIVNM 287
Query: 773 LEGVVEVP 780
           L+ ++  P
Sbjct: 288 LDKLIRNP 295

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 89.0 bits (219), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 132/280 (47%), Gaps = 33/280 (11%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           F +E+G G FG V+ G+    + + VA+K +      SE +F  E   + +  H  LV+L
Sbjct: 31  FVQEIGSGQFGLVHLGY--WLNKDKVAIKTIKEG-SMSEDDFIEEAEVMMKLSHPKLVQL 87
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--GIAGGLFYLHEECCTQ 622
            G C E     LV+EFM +G ++ +L    +  +   T + M   +  G+ YL E C   
Sbjct: 88  YGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEAC--- 143
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +IH D+  +N L+ ++   ++SDFG+ + +  DQ  ++T  +    + +PE F     + 
Sbjct: 144 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 203
Query: 683 KVDVYSYGVLLLEIICLRR----NIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA 738
           K DV+S+GVL+ E+    +    N  N  S+V + I T   +  Y+ R     V    + 
Sbjct: 204 KSDVWSFGVLMWEVFSEGKIPYENRSN--SEVVEDIST--GFRLYKPRLASTHV---YQI 256
Query: 739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
           MN+             C +E P  RP   ++ + L  + E
Sbjct: 257 MNH-------------CWKERPEDRPAFSRLLRQLAEIAE 283

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 89.0 bits (219), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 27/212 (12%)
Query: 508 ELGRGAFGTVY----KGFVNMGSSNHVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLV 562
           ELG+G+FG VY    KG V       VA+K +N      E+ EF  E + + + +  ++V
Sbjct: 32  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFG----------DSKPNWKLRTEIAMGIAGGL 612
           RLLG   +GQ  L++ E M+ G + S+L             + P+     ++A  IA G+
Sbjct: 92  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG---- 668
            YL+     + +H D+  +N ++ + +  +I DFG    +T D   T+   +G KG    
Sbjct: 152 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPV 204
Query: 669 -YVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
            +++PE  ++   T   DV+S+GV+L EI  L
Sbjct: 205 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 236

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 89.0 bits (219), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 31/280 (11%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            K +LG G +G VY+G V    S  VAVK L     + E EF  E   + +  H NLV+L
Sbjct: 17  MKHKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 74
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG--IAGGLFYLHEECCTQ 622
           LG C       ++ EFM+ G +  +L   ++        + M   I+  + YL ++    
Sbjct: 75  LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---N 131
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH D+  +N L+ +++  +++DFGL++L+T D    +   +    + APE       ++
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 683 KVDVYSYGVLLLEIICLRRN----IDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA 738
           K DV+++GVLL EI     +    ID  +S+V + +  D+  +R      E   E   E 
Sbjct: 192 KSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYRMER-----PEGCPEKVYEL 244
Query: 739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
           M               C Q +PS RP+  ++ Q  E + +
Sbjct: 245 MRA-------------CWQWNPSDRPSFAEIHQAFETMFQ 271

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 89.0 bits (219), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 31/280 (11%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            K +LG G +G VY+G V    S  VAVK L     + E EF  E   + +  H NLV+L
Sbjct: 17  MKHKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 74
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG--IAGGLFYLHEECCTQ 622
           LG C       ++ EFM+ G +  +L   ++        + M   I+  + YL ++    
Sbjct: 75  LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---N 131
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH D+  +N L+ +++  +++DFGL++L+T D    +   +    + APE       ++
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 683 KVDVYSYGVLLLEIICLRRN----IDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA 738
           K DV+++GVLL EI     +    ID  +S+V + +  D+  +R      E   E   E 
Sbjct: 192 KSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYRMER-----PEGCPEKVYEL 244
Query: 739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
           M               C Q +PS RP+  ++ Q  E + +
Sbjct: 245 MRA-------------CWQWNPSDRPSFAEIHQAFETMFQ 271

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 89.0 bits (219), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 125/276 (45%), Gaps = 23/276 (8%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            K +LG G +G VY+G V    S  VAVK L     + E EF  E   + +  H NLV+L
Sbjct: 15  MKHKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 72
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG--IAGGLFYLHEECCTQ 622
           LG C       ++ EFM+ G +  +L   ++        + M   I+  + YL ++    
Sbjct: 73  LGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---N 129
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH D+  +N L+ +++  +++DFGL++L+T D    +   +    + APE       ++
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 683 KVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV 742
           K DV+++GVLL EI        +    +D + + +     Y+    E   E   E M   
Sbjct: 190 KSDVWAFGVLLWEIATYGM---SPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRA- 245
Query: 743 TMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
                       C Q +PS RP+  ++ Q  E + +
Sbjct: 246 ------------CWQWNPSDRPSFAEIHQAFETMFQ 269

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 31/280 (11%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            K +LG G +G VY+G V    S  VAVK L     + E EF  E   + +  H NLV+L
Sbjct: 17  MKHKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 74
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG--IAGGLFYLHEECCTQ 622
           LG C       ++ EFM+ G +  +L   ++        + M   I+  + YL ++    
Sbjct: 75  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---N 131
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH D+  +N L+ +++  +++DFGL++L+T D    +   +    + APE       ++
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 683 KVDVYSYGVLLLEIICLRRN----IDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA 738
           K DV+++GVLL EI     +    ID  +S+V + +  D+  +R      E   E   E 
Sbjct: 192 KSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYRMER-----PEGCPEKVYEL 244
Query: 739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
           M               C Q +PS RP+  ++ Q  E + +
Sbjct: 245 MRA-------------CWQWNPSDRPSFAEIHQAFETMFQ 271

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 31/280 (11%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            K +LG G +G VY+G V    S  VAVK L     + E EF  E   + +  H NLV+L
Sbjct: 22  MKHKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 79
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG--IAGGLFYLHEECCTQ 622
           LG C       ++ EFM+ G +  +L   ++        + M   I+  + YL ++    
Sbjct: 80  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---N 136
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH D+  +N L+ +++  +++DFGL++L+T D    +   +    + APE       ++
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 683 KVDVYSYGVLLLEIICLRRN----IDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA 738
           K DV+++GVLL EI     +    ID  +S+V + +  D+  +R      E   E   E 
Sbjct: 197 KSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYRMER-----PEGCPEKVYEL 249
Query: 739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
           M               C Q +PS RP+  ++ Q  E + +
Sbjct: 250 MRA-------------CWQWNPSDRPSFAEIHQAFETMFQ 276

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 130/280 (46%), Gaps = 31/280 (11%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            K +LG G +G VY+G V    S  VAVK L     + E EF  E   + +  H NLV+L
Sbjct: 17  MKHKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 74
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG--IAGGLFYLHEECCTQ 622
           LG C       ++ EFM+ G +  +L   ++        + M   I+  + YL ++    
Sbjct: 75  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---N 131
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH D+  +N L+ +++  +++DFGL++L+T D    +   +    + APE       ++
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 683 KVDVYSYGVLLLEIICLRRN----IDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA 738
           K DV+++GVLL EI     +    ID  +S+V + +  D+  +R      E   E   E 
Sbjct: 192 KSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYRMER-----PEGCPEKVYEL 244
Query: 739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
           M               C Q +PS RP+  ++ Q  E + +
Sbjct: 245 MRA-------------CWQWNPSDRPSFAEIHQAFETMFQ 271

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 27/212 (12%)
Query: 508 ELGRGAFGTVY----KGFVNMGSSNHVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLV 562
           ELG+G+FG VY    KG V       VA+K +N      E+ EF  E + + + +  ++V
Sbjct: 32  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFG----------DSKPNWKLRTEIAMGIAGGL 612
           RLLG   +GQ  L++ E M+ G + S+L             + P+     ++A  IA G+
Sbjct: 92  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 151
Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG---- 668
            YL+     + +H D+  +N ++ + +  +I DFG    +T D   T+   +G KG    
Sbjct: 152 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPV 204
Query: 669 -YVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
            +++PE  ++   T   DV+S+GV+L EI  L
Sbjct: 205 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 236

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 27/212 (12%)
Query: 508 ELGRGAFGTVY----KGFVNMGSSNHVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLV 562
           ELG+G+FG VY    KG V       VA+K +N      E+ EF  E + + + +  ++V
Sbjct: 23  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 82
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFG----------DSKPNWKLRTEIAMGIAGGL 612
           RLLG   +GQ  L++ E M+ G + S+L             + P+     ++A  IA G+
Sbjct: 83  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG---- 668
            YL+     + +H D+  +N ++ + +  +I DFG    +T D   T+   +G KG    
Sbjct: 143 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPV 195
Query: 669 -YVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
            +++PE  ++   T   DV+S+GV+L EI  L
Sbjct: 196 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 227

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 27/212 (12%)
Query: 508 ELGRGAFGTVY----KGFVNMGSSNHVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLV 562
           ELG+G+FG VY    KG V       VA+K +N      E+ EF  E + + + +  ++V
Sbjct: 25  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFG----------DSKPNWKLRTEIAMGIAGGL 612
           RLLG   +GQ  L++ E M+ G + S+L             + P+     ++A  IA G+
Sbjct: 85  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG---- 668
            YL+     + +H D+  +N ++ + +  +I DFG    +T D   T+   +G KG    
Sbjct: 145 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPV 197
Query: 669 -YVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
            +++PE  ++   T   DV+S+GV+L EI  L
Sbjct: 198 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 229

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 89.0 bits (219), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 27/212 (12%)
Query: 508 ELGRGAFGTVY----KGFVNMGSSNHVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLV 562
           ELG+G+FG VY    KG V       VA+K +N      E+ EF  E + + + +  ++V
Sbjct: 26  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFG----------DSKPNWKLRTEIAMGIAGGL 612
           RLLG   +GQ  L++ E M+ G + S+L             + P+     ++A  IA G+
Sbjct: 86  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG---- 668
            YL+     + +H D+  +N ++ + +  +I DFG    +T D   T+   +G KG    
Sbjct: 146 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPV 198
Query: 669 -YVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
            +++PE  ++   T   DV+S+GV+L EI  L
Sbjct: 199 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 230

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 11/201 (5%)
Query: 505 FKEELGRGAFGTVYKGFV--NMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKNL 561
           F E +GRG FG VY G +  N G   H AVK LN +    E  +F  E   +    H N+
Sbjct: 26  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 85
Query: 562 VRLLGYCDEGQNR-LLVYEFMSNGTVASFLFGDSK-PNWKLRTEIAMGIAGGLFYLHEEC 619
           + LLG C   +   L+V  +M +G + +F+  ++  P  K      + +A G+ YL  + 
Sbjct: 86  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK- 144
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ---SHTNTAIRGTKGYVAPEWFR 676
             + +H D+  +N +LD+ +  +++DFGLA+ +   +    H  T  +    ++A E  +
Sbjct: 145 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 202
Query: 677 NMPITVKVDVYSYGVLLLEII 697
               T K DV+S+GVLL E++
Sbjct: 203 TQKFTTKSDVWSFGVLLWELM 223

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 27/212 (12%)
Query: 508 ELGRGAFGTVY----KGFVNMGSSNHVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLV 562
           ELG+G+FG VY    KG V       VA+K +N      E+ EF  E + + + +  ++V
Sbjct: 19  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFG----------DSKPNWKLRTEIAMGIAGGL 612
           RLLG   +GQ  L++ E M+ G + S+L             + P+     ++A  IA G+
Sbjct: 79  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG---- 668
            YL+     + +H D+  +N ++ + +  +I DFG    +T D   T+   +G KG    
Sbjct: 139 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPV 191
Query: 669 -YVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
            +++PE  ++   T   DV+S+GV+L EI  L
Sbjct: 192 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 223

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 11/201 (5%)
Query: 505 FKEELGRGAFGTVYKGFV--NMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKNL 561
           F E +GRG FG VY G +  N G   H AVK LN +    E  +F  E   +    H N+
Sbjct: 34  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 562 VRLLGYCDEGQNR-LLVYEFMSNGTVASFLFGDSK-PNWKLRTEIAMGIAGGLFYLHEEC 619
           + LLG C   +   L+V  +M +G + +F+  ++  P  K      + +A G+ YL    
Sbjct: 94  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 150
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ---SHTNTAIRGTKGYVAPEWFR 676
             + +H D+  +N +LD+ +  +++DFGLA+ +   +    H  T  +    ++A E  +
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 677 NMPITVKVDVYSYGVLLLEII 697
               T K DV+S+GVLL E++
Sbjct: 211 TQKFTTKSDVWSFGVLLWELM 231

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 27/212 (12%)
Query: 508 ELGRGAFGTVY----KGFVNMGSSNHVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLV 562
           ELG+G+FG VY    KG V       VA+K +N      E+ EF  E + + + +  ++V
Sbjct: 25  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFG----------DSKPNWKLRTEIAMGIAGGL 612
           RLLG   +GQ  L++ E M+ G + S+L             + P+     ++A  IA G+
Sbjct: 85  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG---- 668
            YL+     + +H D+  +N ++ + +  +I DFG    +T D   T+   +G KG    
Sbjct: 145 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPV 197
Query: 669 -YVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
            +++PE  ++   T   DV+S+GV+L EI  L
Sbjct: 198 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 229

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 11/201 (5%)
Query: 505 FKEELGRGAFGTVYKGFV--NMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKNL 561
           F E +GRG FG VY G +  N G   H AVK LN +    E  +F  E   +    H N+
Sbjct: 53  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 112
Query: 562 VRLLGYCDEGQNR-LLVYEFMSNGTVASFLFGDSK-PNWKLRTEIAMGIAGGLFYLHEEC 619
           + LLG C   +   L+V  +M +G + +F+  ++  P  K      + +A G+ YL  + 
Sbjct: 113 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK- 171
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ---SHTNTAIRGTKGYVAPEWFR 676
             + +H D+  +N +LD+ +  +++DFGLA+ +   +    H  T  +    ++A E  +
Sbjct: 172 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 229
Query: 677 NMPITVKVDVYSYGVLLLEII 697
               T K DV+S+GVLL E++
Sbjct: 230 TQKFTTKSDVWSFGVLLWELM 250

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 11/201 (5%)
Query: 505 FKEELGRGAFGTVYKGFV--NMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKNL 561
           F E +GRG FG VY G +  N G   H AVK LN +    E  +F  E   +    H N+
Sbjct: 31  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 90
Query: 562 VRLLGYCDEGQNR-LLVYEFMSNGTVASFLFGDSK-PNWKLRTEIAMGIAGGLFYLHEEC 619
           + LLG C   +   L+V  +M +G + +F+  ++  P  K      + +A G+ YL    
Sbjct: 91  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 147
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ---SHTNTAIRGTKGYVAPEWFR 676
             + +H D+  +N +LD+ +  +++DFGLA+ +   +    H  T  +    ++A E  +
Sbjct: 148 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 207
Query: 677 NMPITVKVDVYSYGVLLLEII 697
               T K DV+S+GVLL E++
Sbjct: 208 TQKFTTKSDVWSFGVLLWELM 228

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 27/212 (12%)
Query: 508 ELGRGAFGTVY----KGFVNMGSSNHVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLV 562
           ELG+G+FG VY    KG V       VA+K +N      E+ EF  E + + + +  ++V
Sbjct: 22  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 81
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFG----------DSKPNWKLRTEIAMGIAGGL 612
           RLLG   +GQ  L++ E M+ G + S+L             + P+     ++A  IA G+
Sbjct: 82  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG---- 668
            YL+     + +H D+  +N ++ + +  +I DFG    +T D   T+   +G KG    
Sbjct: 142 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPV 194
Query: 669 -YVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
            +++PE  ++   T   DV+S+GV+L EI  L
Sbjct: 195 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 226

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 11/201 (5%)
Query: 505 FKEELGRGAFGTVYKGFV--NMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKNL 561
           F E +GRG FG VY G +  N G   H AVK LN +    E  +F  E   +    H N+
Sbjct: 52  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 111
Query: 562 VRLLGYCDEGQNR-LLVYEFMSNGTVASFLFGDSK-PNWKLRTEIAMGIAGGLFYLHEEC 619
           + LLG C   +   L+V  +M +G + +F+  ++  P  K      + +A G+ YL    
Sbjct: 112 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 168
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ---SHTNTAIRGTKGYVAPEWFR 676
             + +H D+  +N +LD+ +  +++DFGLA+ +   +    H  T  +    ++A E  +
Sbjct: 169 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 228
Query: 677 NMPITVKVDVYSYGVLLLEII 697
               T K DV+S+GVLL E++
Sbjct: 229 TQKFTTKSDVWSFGVLLWELM 249

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 132/280 (47%), Gaps = 33/280 (11%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           F +E+G G FG V+ G+    + + VA+K +      SE++F  E   + +  H  LV+L
Sbjct: 12  FVQEIGSGQFGLVHLGY--WLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQL 68
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--GIAGGLFYLHEECCTQ 622
            G C E     LV EFM +G ++ +L    +  +   T + M   +  G+ YL E C   
Sbjct: 69  YGVCLEQAPICLVTEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEAC--- 124
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +IH D+  +N L+ ++   ++SDFG+ + +  DQ  ++T  +    + +PE F     + 
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 184
Query: 683 KVDVYSYGVLLLEIICLRR----NIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA 738
           K DV+S+GVL+ E+    +    N  N  S+V + I T   +  Y+ R     V    + 
Sbjct: 185 KSDVWSFGVLMWEVFSEGKIPYENRSN--SEVVEDIST--GFRLYKPRLASTHV---YQI 237
Query: 739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
           MN+             C +E P  RP   ++ + L  + E
Sbjct: 238 MNH-------------CWRERPEDRPAFSRLLRQLAEIAE 264

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 11/201 (5%)
Query: 505 FKEELGRGAFGTVYKGFV--NMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKNL 561
           F E +GRG FG VY G +  N G   H AVK LN +    E  +F  E   +    H N+
Sbjct: 32  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 562 VRLLGYCDEGQNR-LLVYEFMSNGTVASFLFGDSK-PNWKLRTEIAMGIAGGLFYLHEEC 619
           + LLG C   +   L+V  +M +G + +F+  ++  P  K      + +A G+ YL    
Sbjct: 92  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 148
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ---SHTNTAIRGTKGYVAPEWFR 676
             + +H D+  +N +LD+ +  +++DFGLA+ +   +    H  T  +    ++A E  +
Sbjct: 149 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 208
Query: 677 NMPITVKVDVYSYGVLLLEII 697
               T K DV+S+GVLL E++
Sbjct: 209 TQKFTTKSDVWSFGVLLWELM 229

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 135/291 (46%), Gaps = 51/291 (17%)
Query: 508 ELGRGAFGTVYKG----FVNMGSSNHVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLV 562
           ELG+G+FG VY+G     +   +   VAVK +N      E+ EF  E + +      ++V
Sbjct: 24  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLF----------GDSKPNWKLRTEIAMGIAGGL 612
           RLLG   +GQ  L+V E M++G + S+L           G   P  +   ++A  IA G+
Sbjct: 84  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG---- 668
            YL+     + +H D+  +N ++   +  +I DFG    +T D   T+   +G KG    
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPV 196
Query: 669 -YVAPEWFRNMPITVKVDVYSYGVLLLEIICLR----RNIDNEISKVDKAILTDWAYDRY 723
            ++APE  ++   T   D++S+GV+L EI  L     + + NE  +V K ++ D  Y   
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE--QVLKFVM-DGGYLDQ 253
Query: 724 QERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
            +   E            VT L R       C Q +P  RPT  ++  +L+
Sbjct: 254 PDNCPE-----------RVTDLMRM------CWQFNPKMRPTFLEIVNLLK 287

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 11/201 (5%)
Query: 505 FKEELGRGAFGTVYKGFV--NMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKNL 561
           F E +GRG FG VY G +  N G   H AVK LN +    E  +F  E   +    H N+
Sbjct: 29  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 88
Query: 562 VRLLGYCDEGQNR-LLVYEFMSNGTVASFLFGDSK-PNWKLRTEIAMGIAGGLFYLHEEC 619
           + LLG C   +   L+V  +M +G + +F+  ++  P  K      + +A G+ YL    
Sbjct: 89  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 145
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ---SHTNTAIRGTKGYVAPEWFR 676
             + +H D+  +N +LD+ +  +++DFGLA+ +   +    H  T  +    ++A E  +
Sbjct: 146 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 205
Query: 677 NMPITVKVDVYSYGVLLLEII 697
               T K DV+S+GVLL E++
Sbjct: 206 TQKFTTKSDVWSFGVLLWELM 226

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 11/201 (5%)
Query: 505 FKEELGRGAFGTVYKGFV--NMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKNL 561
           F E +GRG FG VY G +  N G   H AVK LN +    E  +F  E   +    H N+
Sbjct: 33  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 562 VRLLGYCDEGQNR-LLVYEFMSNGTVASFLFGDSK-PNWKLRTEIAMGIAGGLFYLHEEC 619
           + LLG C   +   L+V  +M +G + +F+  ++  P  K      + +A G+ YL    
Sbjct: 93  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 149
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ---SHTNTAIRGTKGYVAPEWFR 676
             + +H D+  +N +LD+ +  +++DFGLA+ +   +    H  T  +    ++A E  +
Sbjct: 150 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 209
Query: 677 NMPITVKVDVYSYGVLLLEII 697
               T K DV+S+GVLL E++
Sbjct: 210 TQKFTTKSDVWSFGVLLWELM 230

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 11/201 (5%)
Query: 505 FKEELGRGAFGTVYKGFV--NMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKNL 561
           F E +GRG FG VY G +  N G   H AVK LN +    E  +F  E   +    H N+
Sbjct: 34  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 562 VRLLGYCDEGQNR-LLVYEFMSNGTVASFLFGDSK-PNWKLRTEIAMGIAGGLFYLHEEC 619
           + LLG C   +   L+V  +M +G + +F+  ++  P  K      + +A G+ YL    
Sbjct: 94  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 150
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ---SHTNTAIRGTKGYVAPEWFR 676
             + +H D+  +N +LD+ +  +++DFGLA+ +   +    H  T  +    ++A E  +
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 210
Query: 677 NMPITVKVDVYSYGVLLLEII 697
               T K DV+S+GVLL E++
Sbjct: 211 TQKFTTKSDVWSFGVLLWELM 231

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 135/291 (46%), Gaps = 51/291 (17%)
Query: 508 ELGRGAFGTVYKG----FVNMGSSNHVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLV 562
           ELG+G+FG VY+G     +   +   VAVK +N      E+ EF  E + +      ++V
Sbjct: 23  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLF----------GDSKPNWKLRTEIAMGIAGGL 612
           RLLG   +GQ  L+V E M++G + S+L           G   P  +   ++A  IA G+
Sbjct: 83  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG---- 668
            YL+     + +H D+  +N ++   +  +I DFG    +T D   T+   +G KG    
Sbjct: 143 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPV 195
Query: 669 -YVAPEWFRNMPITVKVDVYSYGVLLLEIICLR----RNIDNEISKVDKAILTDWAYDRY 723
            ++APE  ++   T   D++S+GV+L EI  L     + + NE  +V K ++ D  Y   
Sbjct: 196 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE--QVLKFVM-DGGYLDQ 252
Query: 724 QERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
            +   E            VT L R       C Q +P  RPT  ++  +L+
Sbjct: 253 PDNCPE-----------RVTDLMRM------CWQFNPKMRPTFLEIVNLLK 286

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 27/212 (12%)
Query: 508 ELGRGAFGTVY----KGFVNMGSSNHVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLV 562
           ELG+G+FG VY    KG V       VA+K +N      E+ EF  E + + + +  ++V
Sbjct: 54  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 113
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFG----------DSKPNWKLRTEIAMGIAGGL 612
           RLLG   +GQ  L++ E M+ G + S+L             + P+     ++A  IA G+
Sbjct: 114 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 173
Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG---- 668
            YL+     + +H D+  +N ++ + +  +I DFG    +T D   T+   +G KG    
Sbjct: 174 AYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPV 226
Query: 669 -YVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
            +++PE  ++   T   DV+S+GV+L EI  L
Sbjct: 227 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 258

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 131/280 (46%), Gaps = 31/280 (11%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            K +LG G +G VY+G V    S  VAVK L     + E EF  E   + +  H NLV+L
Sbjct: 263 MKHKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 320
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLF--GDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           LG C       ++ EFM+ G +  +L      + N  +   +A  I+  + YL ++    
Sbjct: 321 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---N 377
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH ++  +N L+ +++  +++DFGL++L+T D    +   +    + APE       ++
Sbjct: 378 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 437
Query: 683 KVDVYSYGVLLLEIICLRRN----IDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA 738
           K DV+++GVLL EI     +    ID  +S+V + +  D+  +R      E   E   E 
Sbjct: 438 KSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYRMER-----PEGCPEKVYEL 490
Query: 739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
           M               C Q +PS RP+  ++ Q  E + +
Sbjct: 491 MRA-------------CWQWNPSDRPSFAEIHQAFETMFQ 517

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 134/291 (46%), Gaps = 51/291 (17%)
Query: 508 ELGRGAFGTVYKG----FVNMGSSNHVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLV 562
           ELG+G+FG VY+G     +   +   VAVK +N      E+ EF  E + +      ++V
Sbjct: 24  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLF----------GDSKPNWKLRTEIAMGIAGGL 612
           RLLG   +GQ  L+V E M++G + S+L           G   P  +   ++A  IA G+
Sbjct: 84  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG---- 668
            YL+     + +H D+  +N ++   +  +I DFG    +T D   T    +G KG    
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFG----MTRDIYETAYYRKGGKGLLPV 196
Query: 669 -YVAPEWFRNMPITVKVDVYSYGVLLLEIICLR----RNIDNEISKVDKAILTDWAYDRY 723
            ++APE  ++   T   D++S+GV+L EI  L     + + NE  +V K ++ D  Y   
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE--QVLKFVM-DGGYLDQ 253
Query: 724 QERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
            +   E            VT L R       C Q +P  RPT  ++  +L+
Sbjct: 254 PDNCPE-----------RVTDLMRM------CWQFNPKMRPTFLEIVNLLK 287

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 98/211 (46%), Gaps = 31/211 (14%)
Query: 505 FKEELGRGAFGTVYKGF-----VNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHK 559
            +E +G G FG VY+ F     V + ++ H   + ++   ++  +E K          H 
Sbjct: 11  LEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKL----FAMLKHP 66
Query: 560 NLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP-----NWKLRTEIAMGIAGGLFY 614
           N++ L G C +  N  LV EF   G +   L G   P     NW      A+ IA G+ Y
Sbjct: 67  NIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMNY 120
Query: 615 LHEECCTQIIHCDIKPQNILL------DDHYNA--RISDFGLAKLLTLDQSHTNTAIRGT 666
           LH+E    IIH D+K  NIL+       D  N   +I+DFGLA+        T  +  G 
Sbjct: 121 LHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW---HRTTKMSAAGA 177
Query: 667 KGYVAPEWFRNMPITVKVDVYSYGVLLLEII 697
             ++APE  R    +   DV+SYGVLL E++
Sbjct: 178 YAWMAPEVIRASMFSKGSDVWSYGVLLWELL 208

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 125/276 (45%), Gaps = 23/276 (8%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            K +LG G +G VY+G V    S  VAVK L     + E EF  E   + +  H NLV+L
Sbjct: 15  MKHKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 72
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG--IAGGLFYLHEECCTQ 622
           LG C       ++ EFM+ G +  +L   ++        + M   I+  + YL ++    
Sbjct: 73  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---N 129
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH D+  +N L+ +++  +++DFGL++L+T D    +   +    + APE       ++
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 683 KVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV 742
           K DV+++GVLL EI        +    +D + + +     Y+    E   E   E M   
Sbjct: 190 KSDVWAFGVLLWEIATYGM---SPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRA- 245
Query: 743 TMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
                       C Q +PS RP+  ++ Q  E + +
Sbjct: 246 ------------CWQWNPSDRPSFAEIHQAFETMFQ 269

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 106/212 (50%), Gaps = 27/212 (12%)
Query: 508 ELGRGAFGTVY----KGFVNMGSSNHVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLV 562
           ELG+G+FG VY    KG V       VA+K +N      E+ EF  E + + + +  ++V
Sbjct: 19  ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFG----------DSKPNWKLRTEIAMGIAGGL 612
           RLLG   +GQ  L++ E M+ G + S+L             + P+     ++A  IA G+
Sbjct: 79  RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG---- 668
            YL+     + +H D+  +N  + + +  +I DFG    +T D   T+   +G KG    
Sbjct: 139 AYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPV 191
Query: 669 -YVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
            +++PE  ++   T   DV+S+GV+L EI  L
Sbjct: 192 RWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 223

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 87.0 bits (214), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 131/278 (47%), Gaps = 25/278 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAV--KKLNSVFQDSEK-EFKAEVNGIGQTHHKNLVRLL 565
           +G G FG V  G + +     VAV  K L   + + ++ +F  E + +GQ  H N+V L 
Sbjct: 51  IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
           G    G+  ++V EFM NG + +FL   D +        +  GIA G+ YL +      +
Sbjct: 111 GVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLAD---MGYV 167
Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQS--HTNTAIRGTKGYVAPEWFRNMPITV 682
           H D+  +NIL++ +   ++SDFGL++++  D    +T T  +    + APE  +    T 
Sbjct: 168 HRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTS 227
Query: 683 KVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV 742
             DV+SYG+++ E++        ++S  D     +  Y       L A        M+  
Sbjct: 228 ASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGY------RLPA-------PMDCP 274
Query: 743 TMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
             LH+ ++    C Q++ + RP   ++  +L+ ++  P
Sbjct: 275 AGLHQLMLD---CWQKERAERPKFEQIVGILDKMIRNP 309

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 102/195 (52%), Gaps = 9/195 (4%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           F +E+G G FG V+ G+    + + VA+K +      SE++F  E   + +  H  LV+L
Sbjct: 11  FVQEIGSGQFGLVHLGY--WLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQL 67
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--GIAGGLFYLHEECCTQ 622
            G C E     LV+EFM +G ++ +L    +  +   T + M   +  G+ YL E     
Sbjct: 68  YGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGMAYLEE---AS 123
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +IH D+  +N L+ ++   ++SDFG+ + +  DQ  ++T  +    + +PE F     + 
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 183
Query: 683 KVDVYSYGVLLLEII 697
           K DV+S+GVL+ E+ 
Sbjct: 184 KSDVWSFGVLMWEVF 198

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 136/291 (46%), Gaps = 51/291 (17%)
Query: 508 ELGRGAFGTVYKG----FVNMGSSNHVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLV 562
           ELG+G+FG VY+G     +   +   VAVK +N      E+ EF  E + +      ++V
Sbjct: 25  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLF----------GDSKPNWKLRTEIAMGIAGGL 612
           RLLG   +GQ  L+V E M++G + S+L           G   P  +   ++A  IA G+
Sbjct: 85  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG---- 668
            YL+     + +H ++  +N ++   +  +I DFG    +T D   T+   +G KG    
Sbjct: 145 AYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPV 197
Query: 669 -YVAPEWFRNMPITVKVDVYSYGVLLLEIICLR----RNIDNEISKVDKAILTDWAYDRY 723
            ++APE  ++   T   D++S+GV+L EI  L     + + NE  +V K ++ D  Y   
Sbjct: 198 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE--QVLKFVM-DGGYLDQ 254
Query: 724 QERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
            +   E            VT L R       C Q +P+ RPT  ++  +L+
Sbjct: 255 PDNCPE-----------RVTDLMRM------CWQFNPNMRPTFLEIVNLLK 288

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 86.7 bits (213), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 136/291 (46%), Gaps = 51/291 (17%)
Query: 508 ELGRGAFGTVYKG----FVNMGSSNHVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLV 562
           ELG+G+FG VY+G     +   +   VAVK +N      E+ EF  E + +      ++V
Sbjct: 24  ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLF----------GDSKPNWKLRTEIAMGIAGGL 612
           RLLG   +GQ  L+V E M++G + S+L           G   P  +   ++A  IA G+
Sbjct: 84  RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG---- 668
            YL+     + +H ++  +N ++   +  +I DFG    +T D   T+   +G KG    
Sbjct: 144 AYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPV 196
Query: 669 -YVAPEWFRNMPITVKVDVYSYGVLLLEIICLR----RNIDNEISKVDKAILTDWAYDRY 723
            ++APE  ++   T   D++S+GV+L EI  L     + + NE  +V K ++ D  Y   
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE--QVLKFVM-DGGYLDQ 253
Query: 724 QERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
            +   E            VT L R       C Q +P+ RPT  ++  +L+
Sbjct: 254 PDNCPE-----------RVTDLMRM------CWQFNPNMRPTFLEIVNLLK 287

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 86.7 bits (213), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 131/281 (46%), Gaps = 31/281 (11%)
Query: 509 LGRGAFGTVYKGFVNMGSSNH--VAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLVRLL 565
           +G G FG V  G + +       VA+K L + + D ++ +F +E + +GQ  H N++ L 
Sbjct: 16  IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLF-GDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
           G   + +  +++ E+M NG++ +FL   D +        +  GI  G+ YL +      +
Sbjct: 76  GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---MSYV 132
Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMPIT 681
           H D+  +NIL++ +   ++SDFG++++L  D     T  RG K    + APE       T
Sbjct: 133 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT-RGGKIPIRWTAPEAIAYRKFT 191
Query: 682 VKVDVYSYGVLLLEIICL--RRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM 739
              DV+SYG+++ E++    R   D     V KAI   +                    M
Sbjct: 192 SASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLP---------------PPM 236
Query: 740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
           +    LH+ ++    C Q++ S RP   ++  ML+ ++  P
Sbjct: 237 DCPIALHQLMLD---CWQKERSDRPKFGQIVNMLDKLIRNP 274

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 86.7 bits (213), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 123/284 (43%), Gaps = 37/284 (13%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           E LG+G FG   K   +  +   + +K+L    +++++ F  EV  +    H N+++ +G
Sbjct: 16  EVLGKGCFGQAIK-VTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
              + +    + E++  GT+   +   DS+  W  R   A  IA G+ YLH      IIH
Sbjct: 75  VLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS---MNIIH 131
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSH-------------TNTAIRGTKGYVAP 672
            D+   N L+ ++ N  ++DFGLA+L+  +++                  + G   ++AP
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 673 EWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLE--A 730
           E         KVDV+S+G++L EII  R N D +                Y  RT++   
Sbjct: 192 EMINGRSYDEKVDVFSFGIVLCEIIG-RVNADPD----------------YLPRTMDFGL 234
Query: 731 LVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
            V   L+          F  +   C   DP  RP+  K+   LE
Sbjct: 235 NVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLE 278

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 86.7 bits (213), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 130/280 (46%), Gaps = 31/280 (11%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            K +LG G +G VY+G V    S  VAVK L     + E EF  E   + +  H NLV+L
Sbjct: 224 MKHKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 281
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG--IAGGLFYLHEECCTQ 622
           LG C       ++ EFM+ G +  +L   ++        + M   I+  + YL ++    
Sbjct: 282 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---N 338
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH ++  +N L+ +++  +++DFGL++L+T D    +   +    + APE       ++
Sbjct: 339 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 398
Query: 683 KVDVYSYGVLLLEIICLRRN----IDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA 738
           K DV+++GVLL EI     +    ID  +S+V + +  D+  +R      E   E   E 
Sbjct: 399 KSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYRMER-----PEGCPEKVYEL 451
Query: 739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
           M               C Q +PS RP+  ++ Q  E + +
Sbjct: 452 MRA-------------CWQWNPSDRPSFAEIHQAFETMFQ 478

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 86.7 bits (213), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 150/337 (44%), Gaps = 71/337 (21%)
Query: 481 EDQGVSYMNLRCFTYKELVEVTRG---FKEELGRGAFGTVYK----GFVNMGSSNHVAVK 533
           E    ++++     Y E  E  R    F + LG GAFG V +    G     +   VAVK
Sbjct: 8   EGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVK 67
Query: 534 KLNSVFQDSEKE-FKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFL- 590
            L S     EKE   +E+  +     H+N+V LLG C  G   L++ E+   G + +FL 
Sbjct: 68  MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR 127
Query: 591 ------FG---------------DSKPNWKLR--TEIAMGIAGGLFYLHEECCTQIIHCD 627
                  G               D +P  +LR     +  +A G+ +L  + C   IH D
Sbjct: 128 RKAEAMLGPSLAPGQDPEGLDKEDGRP-LELRDLLHFSSQVAQGMAFLASKNC---IHRD 183
Query: 628 IKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK----GYVAPEWFRNMPITVK 683
           +  +N+LL + + A+I DFGLA+ +  D   +N  ++G       ++APE   +   TV+
Sbjct: 184 VAARNVLLTNGHVAKIGDFGLARDIMND---SNYIVKGNARLPVKWMAPESIFDCVYTVQ 240
Query: 684 VDVYSYGVLLLEIICLRRN------IDNEISKVDKAILTDWAYDRYQERTLEALVENDLE 737
            DV+SYG+LL EI  L  N      ++++  K+ K        D YQ       +     
Sbjct: 241 SDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK--------DGYQ-------MAQPAF 285
Query: 738 AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
           A  N+      +M A W ++  P+HRPT +++   L+
Sbjct: 286 APKNIYS----IMQACWALE--PTHRPTFQQICSFLQ 316

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 86.7 bits (213), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 131/281 (46%), Gaps = 31/281 (11%)
Query: 509 LGRGAFGTVYKGFVNMGSSNH--VAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLVRLL 565
           +G G FG V  G + +       VA+K L + + D ++ +F +E + +GQ  H N++ L 
Sbjct: 22  IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLF-GDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
           G   + +  +++ E+M NG++ +FL   D +        +  GI  G+ YL +      +
Sbjct: 82  GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---MSYV 138
Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMPIT 681
           H D+  +NIL++ +   ++SDFG++++L  D     T  RG K    + APE       T
Sbjct: 139 HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT-RGGKIPIRWTAPEAIAYRKFT 197
Query: 682 VKVDVYSYGVLLLEIICL--RRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM 739
              DV+SYG+++ E++    R   D     V KAI   +                    M
Sbjct: 198 SASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLP---------------PPM 242
Query: 740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
           +    LH+ ++    C Q++ S RP   ++  ML+ ++  P
Sbjct: 243 DCPIALHQLMLD---CWQKERSDRPKFGQIVNMLDKLIRNP 280

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 85.5 bits (210), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 137/297 (46%), Gaps = 28/297 (9%)
Query: 491 RCFTYKELVEVTRGFKEEL-GRGAFGTVYKGFVNMGSSNHV--AVKKLNSVFQDSEK-EF 546
           R FT +  +E +R   E++ G G  G V  G + +     V  A+K L + + + ++ +F
Sbjct: 40  RSFTRE--IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDF 97
Query: 547 KAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFL-FGDSKPNWKLRTEIA 605
            +E + +GQ  H N++RL G    G+  ++V E+M NG++ +FL   D +        + 
Sbjct: 98  LSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGML 157
Query: 606 MGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT--LDQSHTNTAI 663
            G+  G+ YL +      +H D+  +N+L+D +   ++SDFGL+++L    D ++T T  
Sbjct: 158 RGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGG 214
Query: 664 RGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRY 723
           +    + APE       +   DV+S+GV++ E++                   +  Y   
Sbjct: 215 KIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA----------------YGERPYWNM 258
Query: 724 QERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
             R + + VE        +   H    +   C  +D + RP   ++  +L+ ++  P
Sbjct: 259 TNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 8/193 (4%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           + LG G FG V+ G+ N  +S  VAVK L      S + F  E N +    H  LVRL  
Sbjct: 19  KRLGAGQFGEVWMGYYN--NSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYA 75
Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQII 624
                +   ++ E+M+ G++  FL  D      L   I  +  IA G+ Y+  +     I
Sbjct: 76  VVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYI 132
Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKV 684
           H D++  N+L+ +    +I+DFGLA+++  ++       +    + APE       T+K 
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 192
Query: 685 DVYSYGVLLLEII 697
           DV+S+G+LL EI+
Sbjct: 193 DVWSFGILLYEIV 205

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 100/198 (50%), Gaps = 13/198 (6%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEK--EFKAEVNGIGQTHHKNLVRL 564
           + +G G+FGTVYKG  +      VAVK LN      ++   FK EV  + +T H N++  
Sbjct: 18  QRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 73
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
           +GY  + Q  ++      +         ++K   K   +IA   A G+ YLH +    II
Sbjct: 74  MGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---II 130
Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLT-LDQSHTNTAIRGTKGYVAPEWFR---NMPI 680
           H D+K  NI L +    +I DFGLA + +    SH    + G+  ++APE  R   + P 
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 190
Query: 681 TVKVDVYSYGVLLLEIIC 698
           + + DVY++G++L E++ 
Sbjct: 191 SFQSDVYAFGIVLYELMT 208

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 97/193 (50%), Gaps = 8/193 (4%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           ++LG G FG V+ G+ N  +S  VAVK L      S + F  E N +    H  LVRL  
Sbjct: 18  KKLGAGQFGEVWMGYYN--NSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYA 74
Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQII 624
              + +   ++ EFM+ G++  FL  D      L   I  +  IA G+ Y+  +     I
Sbjct: 75  VVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYI 131
Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKV 684
           H D++  N+L+ +    +I+DFGLA+++  ++       +    + APE       T+K 
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 191
Query: 685 DVYSYGVLLLEII 697
           +V+S+G+LL EI+
Sbjct: 192 NVWSFGILLYEIV 204

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 98/191 (51%), Gaps = 9/191 (4%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           +LG+G FG V+ G  N   +  VA+K L       E  F  E   + +  H+ LV+L   
Sbjct: 15  KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 71
Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR--TEIAMGIAGGLFYLHEECCTQIIH 625
             E +   +V E+MS G++  FL G++    +L    ++A  IA G+ Y+        +H
Sbjct: 72  VSE-EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 127
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D++  NIL+ ++   +++DFGLA+L+  ++       +    + APE       T+K D
Sbjct: 128 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 187
Query: 686 VYSYGVLLLEI 696
           V+S+G+LL E+
Sbjct: 188 VWSFGILLTEL 198

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/297 (23%), Positives = 136/297 (45%), Gaps = 28/297 (9%)
Query: 491 RCFTYKELVEVTRGFKEEL-GRGAFGTVYKGFVNMGSSNHV--AVKKLNSVFQDSEK-EF 546
           R FT +  +E +R   E++ G G  G V  G + +     V  A+K L + + + ++ +F
Sbjct: 40  RSFTRE--IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDF 97
Query: 547 KAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFL-FGDSKPNWKLRTEIA 605
            +E + +GQ  H N++RL G    G+  ++V E+M NG++ +FL   D +        + 
Sbjct: 98  LSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGML 157
Query: 606 MGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT--LDQSHTNTAI 663
            G+  G+ YL +      +H D+  +N+L+D +   ++SDFGL+++L    D + T T  
Sbjct: 158 RGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGG 214
Query: 664 RGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRY 723
           +    + APE       +   DV+S+GV++ E++                   +  Y   
Sbjct: 215 KIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLA----------------YGERPYWNM 258
Query: 724 QERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
             R + + VE        +   H    +   C  +D + RP   ++  +L+ ++  P
Sbjct: 259 TNRDVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 9/194 (4%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKL--NSVFQDSEK-EFKAEVNGIGQTHHKNLVR 563
           +ELG G FGTV KG+  M         K+  N     + K E  AE N + Q  +  +VR
Sbjct: 33  KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 92
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           ++G C E ++ +LV E    G +  +L  +     K   E+   ++ G+ YL E   +  
Sbjct: 93  MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNF 148
Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGT--KGYVAPEWFRNMPIT 681
           +H D+  +N+LL   + A+ISDFGL+K L  D+++      G     + APE       +
Sbjct: 149 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 208
Query: 682 VKVDVYSYGVLLLE 695
            K DV+S+GVL+ E
Sbjct: 209 SKSDVWSFGVLMWE 222

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 9/194 (4%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKL--NSVFQDSEK-EFKAEVNGIGQTHHKNLVR 563
           +ELG G FGTV KG+  M         K+  N     + K E  AE N + Q  +  +VR
Sbjct: 33  KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 92
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           ++G C E ++ +LV E    G +  +L  +     K   E+   ++ G+ YL E   +  
Sbjct: 93  MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNF 148
Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGT--KGYVAPEWFRNMPIT 681
           +H D+  +N+LL   + A+ISDFGL+K L  D+++      G     + APE       +
Sbjct: 149 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 208
Query: 682 VKVDVYSYGVLLLE 695
            K DV+S+GVL+ E
Sbjct: 209 SKSDVWSFGVLMWE 222

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 102/194 (52%), Gaps = 15/194 (7%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           +LG+G FG V+ G  N   +  VA+K L       E  F  E   + +  H+ LV+L   
Sbjct: 18  KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 74
Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR--TEIAMGIAGGLFYLHEECCTQIIH 625
             E +   +V E+MS G++  FL G++    +L    ++A  IA G+ Y+        +H
Sbjct: 75  VSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 130
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMPITV 682
            D++  NIL+ ++   +++DFGLA+L+   + +  TA +G K    + APE       T+
Sbjct: 131 RDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTI 187
Query: 683 KVDVYSYGVLLLEI 696
           K DV+S+G+LL E+
Sbjct: 188 KSDVWSFGILLTEL 201

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 9/194 (4%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKL--NSVFQDSEK-EFKAEVNGIGQTHHKNLVR 563
           +ELG G FGTV KG+  M         K+  N     + K E  AE N + Q  +  +VR
Sbjct: 23  KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 82
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           ++G C E ++ +LV E    G +  +L  +     K   E+   ++ G+ YL E   +  
Sbjct: 83  MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNF 138
Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGT--KGYVAPEWFRNMPIT 681
           +H D+  +N+LL   + A+ISDFGL+K L  D+++      G     + APE       +
Sbjct: 139 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 198
Query: 682 VKVDVYSYGVLLLE 695
            K DV+S+GVL+ E
Sbjct: 199 SKSDVWSFGVLMWE 212

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 9/194 (4%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKL--NSVFQDSEK-EFKAEVNGIGQTHHKNLVR 563
           +ELG G FGTV KG+  M         K+  N     + K E  AE N + Q  +  +VR
Sbjct: 31  KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 90
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           ++G C E ++ +LV E    G +  +L  +     K   E+   ++ G+ YL E   +  
Sbjct: 91  MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNF 146
Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGT--KGYVAPEWFRNMPIT 681
           +H D+  +N+LL   + A+ISDFGL+K L  D+++      G     + APE       +
Sbjct: 147 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 206
Query: 682 VKVDVYSYGVLLLE 695
            K DV+S+GVL+ E
Sbjct: 207 SKSDVWSFGVLMWE 220

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 9/194 (4%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKL--NSVFQDSEK-EFKAEVNGIGQTHHKNLVR 563
           +ELG G FGTV KG+  M         K+  N     + K E  AE N + Q  +  +VR
Sbjct: 17  KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 76
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           ++G C E ++ +LV E    G +  +L  +     K   E+   ++ G+ YL E   +  
Sbjct: 77  MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNF 132
Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGT--KGYVAPEWFRNMPIT 681
           +H D+  +N+LL   + A+ISDFGL+K L  D+++      G     + APE       +
Sbjct: 133 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 192
Query: 682 VKVDVYSYGVLLLE 695
            K DV+S+GVL+ E
Sbjct: 193 SKSDVWSFGVLMWE 206

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 9/194 (4%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKL--NSVFQDSEK-EFKAEVNGIGQTHHKNLVR 563
           +ELG G FGTV KG+  M         K+  N     + K E  AE N + Q  +  +VR
Sbjct: 13  KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 72
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           ++G C E ++ +LV E    G +  +L  +     K   E+   ++ G+ YL E   +  
Sbjct: 73  MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNF 128
Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGT--KGYVAPEWFRNMPIT 681
           +H D+  +N+LL   + A+ISDFGL+K L  D+++      G     + APE       +
Sbjct: 129 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 188
Query: 682 VKVDVYSYGVLLLE 695
            K DV+S+GVL+ E
Sbjct: 189 SKSDVWSFGVLMWE 202

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 9/194 (4%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKL--NSVFQDSEK-EFKAEVNGIGQTHHKNLVR 563
           +ELG G FGTV KG+  M         K+  N     + K E  AE N + Q  +  +VR
Sbjct: 11  KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 70
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           ++G C E ++ +LV E    G +  +L  +     K   E+   ++ G+ YL E   +  
Sbjct: 71  MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNF 126
Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGT--KGYVAPEWFRNMPIT 681
           +H D+  +N+LL   + A+ISDFGL+K L  D+++      G     + APE       +
Sbjct: 127 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 186
Query: 682 VKVDVYSYGVLLLE 695
            K DV+S+GVL+ E
Sbjct: 187 SKSDVWSFGVLMWE 200

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 102/194 (52%), Gaps = 15/194 (7%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           +LG+G FG V+ G  N   +  VA+K L       E  F  E   + +  H+ LV+L   
Sbjct: 191 KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 247
Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR--TEIAMGIAGGLFYLHEECCTQIIH 625
             E +   +V E+MS G++  FL G++    +L    ++A  IA G+ Y+        +H
Sbjct: 248 VSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 303
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMPITV 682
            D++  NIL+ ++   +++DFGLA+L+   + +  TA +G K    + APE       T+
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 683 KVDVYSYGVLLLEI 696
           K DV+S+G+LL E+
Sbjct: 361 KSDVWSFGILLTEL 374

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 102/209 (48%), Gaps = 23/209 (11%)
Query: 509 LGRGAFGTVYKGFV----NMGSSNHVAVKKLNSVFQDS-EKEFKAEVNGIGQTHHKNLVR 563
           LG GAFG VY+G V    N  S   VAVK L  V+ +  E +F  E   I + +H+N+VR
Sbjct: 53  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIAGGLFYL 615
            +G   +   R ++ E M+ G + SFL  +++P     + +AM         IA G  YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 616 HEECCTQIIHCDIKPQNILLD---DHYNARISDFGLAKLLTLDQSHTN--TAIRGTKGYV 670
            E      IH DI  +N LL        A+I DFG+A+ +     +     A+   K ++
Sbjct: 172 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WM 227
Query: 671 APEWFRNMPITVKVDVYSYGVLLLEIICL 699
            PE F     T K D +S+GVLL EI  L
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFSL 256

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 9/191 (4%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           +LG+G FG V+ G  N   +  VA+K L       E  F  E   + +  H+ LV+L   
Sbjct: 25  KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 81
Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR--TEIAMGIAGGLFYLHEECCTQIIH 625
             E +   +V E+MS G++  FL G+     +L    ++A  IA G+ Y+        +H
Sbjct: 82  VSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D++  NIL+ ++   +++DFGLA+L+  ++       +    + APE       T+K D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 686 VYSYGVLLLEI 696
           V+S+G+LL E+
Sbjct: 198 VWSFGILLTEL 208

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEK--EFKAEVNGIGQTHHKNLVRL 564
           + +G G+FGTVYKG  +      VAVK LN      ++   FK EV  + +T H N++  
Sbjct: 30  QRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 85
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           +GY  + Q   +V ++    ++   L   ++K   K   +IA   A G+ YLH +    I
Sbjct: 86  MGYSTKPQ-LAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPEWFR---NMP 679
           IH D+K  NI L +    +I DFGLA   +    SH    + G+  ++APE  R   + P
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 680 ITVKVDVYSYGVLLLEIIC 698
            + + DVY++G++L E++ 
Sbjct: 202 YSFQSDVYAFGIVLYELMT 220

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 83.6 bits (205), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 102/194 (52%), Gaps = 15/194 (7%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           +LG+G FG V+ G  N   +  VA+K L       E  F  E   + +  H+ LV+L   
Sbjct: 191 KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 247
Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR--TEIAMGIAGGLFYLHEECCTQIIH 625
             E +   +V E+MS G++  FL G++    +L    ++A  IA G+ Y+        +H
Sbjct: 248 VSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 303
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMPITV 682
            D++  NIL+ ++   +++DFGLA+L+   + +  TA +G K    + APE       T+
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 683 KVDVYSYGVLLLEI 696
           K DV+S+G+LL E+
Sbjct: 361 KSDVWSFGILLTEL 374

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 103/199 (51%), Gaps = 15/199 (7%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           +LG+G FG V+ G  N   +  VA+K L       E  F  E   + +  H+ LV+L   
Sbjct: 274 KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 330
Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR--TEIAMGIAGGLFYLHEECCTQIIH 625
             E +   +V E+MS G++  FL G++    +L    ++A  IA G+ Y+        +H
Sbjct: 331 VSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 386
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMPITV 682
            D++  NIL+ ++   +++DFGLA+L+   + +  TA +G K    + APE       T+
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTI 443
Query: 683 KVDVYSYGVLLLEIICLRR 701
           K DV+S+G+LL E+    R
Sbjct: 444 KSDVWSFGILLTELTTKGR 462

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 9/194 (4%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKL--NSVFQDSEK-EFKAEVNGIGQTHHKNLVR 563
           +ELG G FGTV KG+  M         K+  N     + K E  AE N + Q  +  +VR
Sbjct: 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 434
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           ++G C E ++ +LV E    G +  +L  +     K   E+   ++ G+ YL E   +  
Sbjct: 435 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNF 490
Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGT--KGYVAPEWFRNMPIT 681
           +H D+  +N+LL   + A+ISDFGL+K L  D+++      G     + APE       +
Sbjct: 491 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 550
Query: 682 VKVDVYSYGVLLLE 695
            K DV+S+GVL+ E
Sbjct: 551 SKSDVWSFGVLMWE 564

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 83.2 bits (204), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 9/194 (4%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKL--NSVFQDSEK-EFKAEVNGIGQTHHKNLVR 563
           +ELG G FGTV KG+  M         K+  N     + K E  AE N + Q  +  +VR
Sbjct: 376 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 435
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           ++G C E ++ +LV E    G +  +L  +     K   E+   ++ G+ YL E   +  
Sbjct: 436 MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNF 491
Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGT--KGYVAPEWFRNMPIT 681
           +H D+  +N+LL   + A+ISDFGL+K L  D+++      G     + APE       +
Sbjct: 492 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFS 551
Query: 682 VKVDVYSYGVLLLE 695
            K DV+S+GVL+ E
Sbjct: 552 SKSDVWSFGVLMWE 565

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 9/191 (4%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           +LG+G FG V+ G  N   +  VA+K L       E  F  E   + +  H+ LV+L   
Sbjct: 14  KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 70
Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR--TEIAMGIAGGLFYLHEECCTQIIH 625
             E +   +V E+MS G++  FL G+     +L    ++A  IA G+ Y+        +H
Sbjct: 71  VSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 126
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D++  NIL+ ++   +++DFGLA+L+  ++       +    + APE       T+K D
Sbjct: 127 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 186
Query: 686 VYSYGVLLLEI 696
           V+S+G+LL E+
Sbjct: 187 VWSFGILLTEL 197

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 9/191 (4%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           +LG+G FG V+ G  N   +  VA+K L       E  F  E   + +  H+ LV+L   
Sbjct: 16  KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 72
Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR--TEIAMGIAGGLFYLHEECCTQIIH 625
             E +   +V E+MS G++  FL G+     +L    ++A  IA G+ Y+        +H
Sbjct: 73  VSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 128
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D++  NIL+ ++   +++DFGLA+L+  ++       +    + APE       T+K D
Sbjct: 129 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 686 VYSYGVLLLEI 696
           V+S+G+LL E+
Sbjct: 189 VWSFGILLTEL 199

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 82.8 bits (203), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 102/194 (52%), Gaps = 15/194 (7%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           +LG+G FG V+ G  N   +  VA+K L       E  F  E   + +  H+ LV+L   
Sbjct: 191 KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 247
Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR--TEIAMGIAGGLFYLHEECCTQIIH 625
             E +   +V E+MS G++  FL G++    +L    ++A  IA G+ Y+        +H
Sbjct: 248 VSE-EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 303
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMPITV 682
            D++  NIL+ ++   +++DFGLA+L+   + +  TA +G K    + APE       T+
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 683 KVDVYSYGVLLLEI 696
           K DV+S+G+LL E+
Sbjct: 361 KSDVWSFGILLTEL 374

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 82.8 bits (203), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 103/200 (51%), Gaps = 19/200 (9%)
Query: 509 LGRGAFGTVYKGFVNMGSSNH--VAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLVRLL 565
           +G G FG V  G + +       VA+K L   + + ++ +F  E + +GQ  H N++ L 
Sbjct: 30  IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM-----GIAGGLFYLHEECC 620
           G   + +  ++V E+M NG++ +FL    K N    T I +     GI+ G+ YL +   
Sbjct: 90  GVVTKSKPVMIVTEYMENGSLDTFL----KKNDGQFTVIQLVGMLRGISAGMKYLSD--- 142
Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRN 677
              +H D+  +NIL++ +   ++SDFGL+++L  D     T  RG K    + APE    
Sbjct: 143 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-RGGKIPIRWTAPEAIAF 201
Query: 678 MPITVKVDVYSYGVLLLEII 697
              T   DV+SYG+++ E++
Sbjct: 202 RKFTSASDVWSYGIVMWEVV 221

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 82.8 bits (203), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKL--NSVFQDSEK-EFKAEVNGIGQTHHKNLVR 563
           +ELG G FGTV KG+  M         K+  N     + K E  AE N + Q  +  +VR
Sbjct: 17  KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 76
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           ++G C E ++ +LV E    G +  +L  +     K   E+   ++ G+ YL E   +  
Sbjct: 77  MIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE---SNF 132
Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGT--KGYVAPEWFRNMPIT 681
           +H D+  +N+LL   + A+ISDFGL+K L  D++       G     + APE       +
Sbjct: 133 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFS 192
Query: 682 VKVDVYSYGVLLLE 695
            K DV+S+GVL+ E
Sbjct: 193 SKSDVWSFGVLMWE 206

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 82.8 bits (203), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 9/191 (4%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           +LG+G FG V+ G  N   +  VA+K L       E  F  E   + +  H+ LV+L   
Sbjct: 25  KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 81
Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR--TEIAMGIAGGLFYLHEECCTQIIH 625
             E +   +V E+MS G++  FL G+     +L    ++A  IA G+ Y+        +H
Sbjct: 82  VSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D++  NIL+ ++   +++DFGLA+L+  ++       +    + APE       T+K D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 686 VYSYGVLLLEI 696
           V+S+G+LL E+
Sbjct: 198 VWSFGILLTEL 208

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 82.8 bits (203), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 9/191 (4%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           +LG+G FG V+ G  N   +  VA+K L       E  F  E   + +  H+ LV+L   
Sbjct: 25  KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKIRHEKLVQLYAV 81
Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR--TEIAMGIAGGLFYLHEECCTQIIH 625
             E +   +V E+MS G++  FL G+     +L    ++A  IA G+ Y+        +H
Sbjct: 82  VSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D++  NIL+ ++   +++DFGLA+L+  ++       +    + APE       T+K D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 686 VYSYGVLLLEI 696
           V+S+G+LL E+
Sbjct: 198 VWSFGILLTEL 208

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 82.8 bits (203), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 98/198 (49%), Gaps = 13/198 (6%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEK--EFKAEVNGIGQTHHKNLVRL 564
           + +G G+FGTVYKG  +      VAVK LN      ++   FK EV  + +T H N++  
Sbjct: 30  QRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 85
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
           +GY    Q  ++      +         ++K   K   +IA   A G+ YLH +    II
Sbjct: 86  MGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---II 142
Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLT-LDQSHTNTAIRGTKGYVAPEWFR---NMPI 680
           H D+K  NI L +    +I DFGLA   +    SH    + G+  ++APE  R   + P 
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 681 TVKVDVYSYGVLLLEIIC 698
           + + DVY++G++L E++ 
Sbjct: 203 SFQSDVYAFGIVLYELMT 220

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 82.4 bits (202), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 15/194 (7%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           +LG+G FG V+ G  N   +  VA+K L       E  F  E   + +  H+ LV+L   
Sbjct: 25  KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 81
Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR--TEIAMGIAGGLFYLHEECCTQIIH 625
             E +   +V E+MS G++  FL G+     +L    ++A  IA G+ Y+        +H
Sbjct: 82  VSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMPITV 682
            D++  NIL+ ++   +++DFGLA+L+   + +  TA +G K    + APE       T+
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 683 KVDVYSYGVLLLEI 696
           K DV+S+G+LL E+
Sbjct: 195 KSDVWSFGILLTEL 208

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 82.4 bits (202), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 115/275 (41%), Gaps = 27/275 (9%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           +ELG G FG V  G         VAVK +      SE EF  E   + +  H  LV+  G
Sbjct: 14  KELGSGQFGVVKLG--KWKGQYDVAVKMIKEG-SMSEDEFFQEAQTMMKLSHPKLVKFYG 70
Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSK---PNWKLRTEIAMGIAGGLFYLHEECCTQI 623
            C +     +V E++SNG + ++L    K   P+  L  E+   +  G+ +L      Q 
Sbjct: 71  VCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLL--EMCYDVCEGMAFLESH---QF 125
Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVK 683
           IH D+  +N L+D     ++SDFG+ + +  DQ  ++   +    + APE F     + K
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSK 185
Query: 684 VDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVT 743
            DV+++G+L+ E+  L +                  YD Y    +   V           
Sbjct: 186 SDVWAFGILMWEVFSLGKM----------------PYDLYTNSEVVLKVSQGHRLYRPHL 229
Query: 744 MLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
                  + + C  E P  RPT +++   +E + E
Sbjct: 230 ASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 82.4 bits (202), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 13/199 (6%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLL 565
           E++GRG FG V+ G +    +  VAVK        D + +F  E   + Q  H N+VRL+
Sbjct: 120 EQIGRGNFGEVFSGRLR-ADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAG----GLFYLHEECCT 621
           G C + Q   +V E +  G   +FL  +     +LR +  + + G    G+ YL  +CC 
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGA---RLRVKTLLQMVGDAAAGMEYLESKCC- 234
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK-GYVAPEWFRNMPI 680
             IH D+  +N L+ +    +ISDFG+++         +  +R     + APE       
Sbjct: 235 --IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRY 292
Query: 681 TVKVDVYSYGVLLLEIICL 699
           + + DV+S+G+LL E   L
Sbjct: 293 SSESDVWSFGILLWETFSL 311

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 82.4 bits (202), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 101/209 (48%), Gaps = 23/209 (11%)
Query: 509 LGRGAFGTVYKGFV----NMGSSNHVAVKKLNSVFQDS-EKEFKAEVNGIGQTHHKNLVR 563
           LG GAFG VY+G V    N  S   VAVK L  V  +  E +F  E   I + +H+N+VR
Sbjct: 39  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIAGGLFYL 615
            +G   +   R ++ E M+ G + SFL  +++P     + +AM         IA G  YL
Sbjct: 99  CIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 616 HEECCTQIIHCDIKPQNILLD---DHYNARISDFGLAKLLTLDQSHTN--TAIRGTKGYV 670
            E      IH DI  +N LL        A+I DFG+A+ +     +     A+   K ++
Sbjct: 158 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WM 213
Query: 671 APEWFRNMPITVKVDVYSYGVLLLEIICL 699
            PE F     T K D +S+GVLL EI  L
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFSL 242

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 82.4 bits (202), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 9/191 (4%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           +LG+G FG V+ G  N   +  VA+K L       E  F  E   + +  H+ LV+L   
Sbjct: 25  KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 81
Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR--TEIAMGIAGGLFYLHEECCTQIIH 625
             E +   +V E+MS G++  FL G+     +L    ++A  IA G+ Y+        +H
Sbjct: 82  VSE-EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D++  NIL+ ++   +++DFGLA+L+  ++       +    + APE       T+K D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 686 VYSYGVLLLEI 696
           V+S+G+LL E+
Sbjct: 198 VWSFGILLTEL 208

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEK--EFKAEVNGIGQTH 557
           ++T G  + +G G+FGTVYKG  +      VAVK LN      ++   FK EV  + +T 
Sbjct: 14  QITVG--QRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 67
Query: 558 HKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           H N++  +GY  + Q  ++      +         ++K       +IA   A G+ YLH 
Sbjct: 68  HVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT-LDQSHTNTAIRGTKGYVAPEWFR 676
           +    IIH D+K  NI L +    +I DFGLA + +    SH    + G+  ++APE  R
Sbjct: 128 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 677 NM---PITVKVDVYSYGVLLLEIIC 698
                P + + DVY++G++L E++ 
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMT 209

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEK--EFKAEVNGIGQTH 557
           ++T G  + +G G+FGTVYKG  +      VAVK LN      ++   FK EV  + +T 
Sbjct: 14  QITVG--QRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 67
Query: 558 HKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           H N++  +GY  + Q  ++      +         ++K       +IA   A G+ YLH 
Sbjct: 68  HVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT-LDQSHTNTAIRGTKGYVAPEWFR 676
           +    IIH D+K  NI L +    +I DFGLA + +    SH    + G+  ++APE  R
Sbjct: 128 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 677 NM---PITVKVDVYSYGVLLLEIIC 698
                P + + DVY++G++L E++ 
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMT 209

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 82.4 bits (202), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEK--EFKAEVNGIGQTH 557
           ++T G  + +G G+FGTVYKG         VAVK LN      ++   FK EV  + +T 
Sbjct: 9   QITVG--QRIGSGSFGTVYKG----KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 62
Query: 558 HKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           H N++  +GY  + Q  ++      +         ++K       +IA   A G+ YLH 
Sbjct: 63  HVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT-LDQSHTNTAIRGTKGYVAPEWFR 676
           +    IIH D+K  NI L +    +I DFGLA + +    SH    + G+  ++APE  R
Sbjct: 123 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 677 NM---PITVKVDVYSYGVLLLEIIC 698
                P + + DVY++G++L E++ 
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMT 204

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 101/209 (48%), Gaps = 23/209 (11%)
Query: 509 LGRGAFGTVYKGFV----NMGSSNHVAVKKLNSVFQDS-EKEFKAEVNGIGQTHHKNLVR 563
           LG GAFG VY+G V    N  S   VAVK L  V  +  E +F  E   I + +H+N+VR
Sbjct: 53  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIAGGLFYL 615
            +G   +   R ++ E M+ G + SFL  +++P     + +AM         IA G  YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 616 HEECCTQIIHCDIKPQNILLD---DHYNARISDFGLAKLLTLDQSHTN--TAIRGTKGYV 670
            E      IH DI  +N LL        A+I DFG+A+ +     +     A+   K ++
Sbjct: 172 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WM 227
Query: 671 APEWFRNMPITVKVDVYSYGVLLLEIICL 699
            PE F     T K D +S+GVLL EI  L
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFSL 256

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 101/209 (48%), Gaps = 23/209 (11%)
Query: 509 LGRGAFGTVYKGFV----NMGSSNHVAVKKLNSVFQDS-EKEFKAEVNGIGQTHHKNLVR 563
           LG GAFG VY+G V    N  S   VAVK L  V  +  E +F  E   I + +H+N+VR
Sbjct: 38  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIAGGLFYL 615
            +G   +   R ++ E M+ G + SFL  +++P     + +AM         IA G  YL
Sbjct: 98  CIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 616 HEECCTQIIHCDIKPQNILLD---DHYNARISDFGLAKLLTLDQSHTN--TAIRGTKGYV 670
            E      IH DI  +N LL        A+I DFG+A+ +     +     A+   K ++
Sbjct: 157 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WM 212
Query: 671 APEWFRNMPITVKVDVYSYGVLLLEIICL 699
            PE F     T K D +S+GVLL EI  L
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEIFSL 241

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 96/191 (50%), Gaps = 9/191 (4%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           +LG+G FG V+ G  N   +  VA+K L       E  F  E   + +  H+ LV+L   
Sbjct: 25  KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 81
Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR--TEIAMGIAGGLFYLHEECCTQIIH 625
             E +   +V E+MS G +  FL G+     +L    ++A  IA G+ Y+        +H
Sbjct: 82  VSE-EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D++  NIL+ ++   +++DFGLA+L+  ++       +    + APE       T+K D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 686 VYSYGVLLLEI 696
           V+S+G+LL E+
Sbjct: 198 VWSFGILLTEL 208

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 101/209 (48%), Gaps = 23/209 (11%)
Query: 509 LGRGAFGTVYKGFV----NMGSSNHVAVKKLNSVFQDS-EKEFKAEVNGIGQTHHKNLVR 563
           LG GAFG VY+G V    N  S   VAVK L  V  +  E +F  E   I + +H+N+VR
Sbjct: 55  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIAGGLFYL 615
            +G   +   R ++ E M+ G + SFL  +++P     + +AM         IA G  YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYL 173
Query: 616 HEECCTQIIHCDIKPQNILLD---DHYNARISDFGLAKLLTLDQSHTN--TAIRGTKGYV 670
            E      IH DI  +N LL        A+I DFG+A+ +     +     A+   K ++
Sbjct: 174 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WM 229
Query: 671 APEWFRNMPITVKVDVYSYGVLLLEIICL 699
            PE F     T K D +S+GVLL EI  L
Sbjct: 230 PPEAFMEGIFTSKTDTWSFGVLLWEIFSL 258

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEK--EFKAEVNGIGQTH 557
           ++T G  + +G G+FGTVYKG  +      VAVK LN      ++   FK EV  + +T 
Sbjct: 11  QITVG--QRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 64
Query: 558 HKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           H N++  +GY  + Q  ++      +         ++K       +IA   A G+ YLH 
Sbjct: 65  HVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 124
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT-LDQSHTNTAIRGTKGYVAPEWFR 676
           +    IIH D+K  NI L +    +I DFGLA + +    SH    + G+  ++APE  R
Sbjct: 125 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 181
Query: 677 NM---PITVKVDVYSYGVLLLEIIC 698
                P + + DVY++G++L E++ 
Sbjct: 182 MQDKNPYSFQSDVYAFGIVLYELMT 206

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 101/209 (48%), Gaps = 23/209 (11%)
Query: 509 LGRGAFGTVYKGFV----NMGSSNHVAVKKLNSVFQDS-EKEFKAEVNGIGQTHHKNLVR 563
           LG GAFG VY+G V    N  S   VAVK L  V  +  E +F  E   I + +H+N+VR
Sbjct: 38  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIAGGLFYL 615
            +G   +   R ++ E M+ G + SFL  +++P     + +AM         IA G  YL
Sbjct: 98  CIGVSLQSLPRFILMELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 616 HEECCTQIIHCDIKPQNILLD---DHYNARISDFGLAKLLTLDQSHTN--TAIRGTKGYV 670
            E      IH DI  +N LL        A+I DFG+A+ +     +     A+   K ++
Sbjct: 157 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WM 212
Query: 671 APEWFRNMPITVKVDVYSYGVLLLEIICL 699
            PE F     T K D +S+GVLL EI  L
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEIFSL 241

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 101/209 (48%), Gaps = 23/209 (11%)
Query: 509 LGRGAFGTVYKGFV----NMGSSNHVAVKKLNSVFQDS-EKEFKAEVNGIGQTHHKNLVR 563
           LG GAFG VY+G V    N  S   VAVK L  V  +  E +F  E   I + +H+N+VR
Sbjct: 39  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIAGGLFYL 615
            +G   +   R ++ E M+ G + SFL  +++P     + +AM         IA G  YL
Sbjct: 99  CIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 616 HEECCTQIIHCDIKPQNILLD---DHYNARISDFGLAKLLTLDQSHTN--TAIRGTKGYV 670
            E      IH DI  +N LL        A+I DFG+A+ +     +     A+   K ++
Sbjct: 158 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WM 213
Query: 671 APEWFRNMPITVKVDVYSYGVLLLEIICL 699
            PE F     T K D +S+GVLL EI  L
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFSL 242

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 98/198 (49%), Gaps = 13/198 (6%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEK--EFKAEVNGIGQTHHKNLVRL 564
           + +G G+FGTVYKG  +      VAVK LN      ++   FK EV  + +T H N++  
Sbjct: 42  QRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 97
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
           +GY  + Q  ++      +         ++K       +IA   A G+ YLH +    II
Sbjct: 98  MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---II 154
Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPEWFRNM---PI 680
           H D+K  NI L +    +I DFGLA + +    SH    + G+  ++APE  R     P 
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 681 TVKVDVYSYGVLLLEIIC 698
           + + DVY++G++L E++ 
Sbjct: 215 SFQSDVYAFGIVLYELMT 232

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEK--EFKAEVNGIGQTH 557
           ++T G  + +G G+FGTVYKG  +      VAVK LN      ++   FK EV  + +T 
Sbjct: 36  QITVG--QRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 89
Query: 558 HKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           H N++  +GY  + Q  ++      +         ++K       +IA   A G+ YLH 
Sbjct: 90  HVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 149
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT-LDQSHTNTAIRGTKGYVAPEWFR 676
           +    IIH D+K  NI L +    +I DFGLA + +    SH    + G+  ++APE  R
Sbjct: 150 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 206
Query: 677 NM---PITVKVDVYSYGVLLLEIIC 698
                P + + DVY++G++L E++ 
Sbjct: 207 MQDKNPYSFQSDVYAFGIVLYELMT 231

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 123/274 (44%), Gaps = 29/274 (10%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            +++LG G FG V+    N  +   V   K  S+   S + F AE N +    H  LV+L
Sbjct: 19  LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM---SVEAFLAEANVMKTLQHDKLVKL 75
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
                + +   ++ EFM+ G++  FL  D  SK       + +  IA G+ ++ +     
Sbjct: 76  HAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---N 131
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH D++  NIL+      +I+DFGLA+++  ++       +    + APE       T+
Sbjct: 132 YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTI 191
Query: 683 KVDVYSYGVLLLEIICLRRNIDNEIS--KVDKAILTDWAYDRYQERTLEALVENDLEAMN 740
           K DV+S+G+LL+EI+   R     +S  +V +A+   +   R          EN  E + 
Sbjct: 192 KSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR---------PENCPEELY 242
Query: 741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
           N+ M          C +  P  RPT   +  +L+
Sbjct: 243 NIMMR---------CWKNRPEERPTFEYIQSVLD 267

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 96/191 (50%), Gaps = 9/191 (4%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           +LG+G FG V+ G  N   +  VA+K L       E  F  E   + +  H+ LV+L   
Sbjct: 25  KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 81
Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR--TEIAMGIAGGLFYLHEECCTQIIH 625
             E +   +V E+MS G +  FL G+     +L    ++A  IA G+ Y+        +H
Sbjct: 82  VSE-EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D++  NIL+ ++   +++DFGLA+L+  ++       +    + APE       T+K D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 686 VYSYGVLLLEI 696
           V+S+G+LL E+
Sbjct: 198 VWSFGILLTEL 208

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 101/209 (48%), Gaps = 23/209 (11%)
Query: 509 LGRGAFGTVYKGFV----NMGSSNHVAVKKLNSVFQDS-EKEFKAEVNGIGQTHHKNLVR 563
           LG GAFG VY+G V    N  S   VAVK L  V  +  E +F  E   I + +H+N+VR
Sbjct: 45  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIAGGLFYL 615
            +G   +   R ++ E M+ G + SFL  +++P     + +AM         IA G  YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYL 163
Query: 616 HEECCTQIIHCDIKPQNILLD---DHYNARISDFGLAKLLTLDQSHTN--TAIRGTKGYV 670
            E      IH DI  +N LL        A+I DFG+A+ +     +     A+   K ++
Sbjct: 164 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WM 219
Query: 671 APEWFRNMPITVKVDVYSYGVLLLEIICL 699
            PE F     T K D +S+GVLL EI  L
Sbjct: 220 PPEAFMEGIFTSKTDTWSFGVLLWEIFSL 248

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 101/209 (48%), Gaps = 23/209 (11%)
Query: 509 LGRGAFGTVYKGFV----NMGSSNHVAVKKLNSVFQDS-EKEFKAEVNGIGQTHHKNLVR 563
           LG GAFG VY+G V    N  S   VAVK L  V  +  E +F  E   I + +H+N+VR
Sbjct: 53  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIAGGLFYL 615
            +G   +   R ++ E M+ G + SFL  +++P     + +AM         IA G  YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 616 HEECCTQIIHCDIKPQNILLD---DHYNARISDFGLAKLLTLDQSHTN--TAIRGTKGYV 670
            E      IH DI  +N LL        A+I DFG+A+ +     +     A+   K ++
Sbjct: 172 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WM 227
Query: 671 APEWFRNMPITVKVDVYSYGVLLLEIICL 699
            PE F     T K D +S+GVLL EI  L
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFSL 256

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 13/199 (6%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLL 565
           E++GRG FG V+ G +    +  VAVK        D + +F  E   + Q  H N+VRL+
Sbjct: 120 EQIGRGNFGEVFSGRLR-ADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAG----GLFYLHEECCT 621
           G C + Q   +V E +  G   +FL  +     +LR +  + + G    G+ YL  +CC 
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGA---RLRVKTLLQMVGDAAAGMEYLESKCC- 234
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK-GYVAPEWFRNMPI 680
             IH D+  +N L+ +    +ISDFG+++         +  +R     + APE       
Sbjct: 235 --IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRY 292
Query: 681 TVKVDVYSYGVLLLEIICL 699
           + + DV+S+G+LL E   L
Sbjct: 293 SSESDVWSFGILLWETFSL 311

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 101/209 (48%), Gaps = 23/209 (11%)
Query: 509 LGRGAFGTVYKGFV----NMGSSNHVAVKKLNSVFQDS-EKEFKAEVNGIGQTHHKNLVR 563
           LG GAFG VY+G V    N  S   VAVK L  V  +  E +F  E   I + +H+N+VR
Sbjct: 65  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIAGGLFYL 615
            +G   +   R ++ E M+ G + SFL  +++P     + +AM         IA G  YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYL 183
Query: 616 HEECCTQIIHCDIKPQNILLD---DHYNARISDFGLAKLLTLDQSHTN--TAIRGTKGYV 670
            E      IH DI  +N LL        A+I DFG+A+ +     +     A+   K ++
Sbjct: 184 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WM 239
Query: 671 APEWFRNMPITVKVDVYSYGVLLLEIICL 699
            PE F     T K D +S+GVLL EI  L
Sbjct: 240 PPEAFMEGIFTSKTDTWSFGVLLWEIFSL 268

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 101/209 (48%), Gaps = 23/209 (11%)
Query: 509 LGRGAFGTVYKGFV----NMGSSNHVAVKKLNSVFQDS-EKEFKAEVNGIGQTHHKNLVR 563
           LG GAFG VY+G V    N  S   VAVK L  V  +  E +F  E   I + +H+N+VR
Sbjct: 30  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIAGGLFYL 615
            +G   +   R ++ E M+ G + SFL  +++P     + +AM         IA G  YL
Sbjct: 90  CIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYL 148
Query: 616 HEECCTQIIHCDIKPQNILL---DDHYNARISDFGLAKLLTLDQSHTN--TAIRGTKGYV 670
            E      IH DI  +N LL        A+I DFG+A+ +     +     A+   K ++
Sbjct: 149 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK-WM 204
Query: 671 APEWFRNMPITVKVDVYSYGVLLLEIICL 699
            PE F     T K D +S+GVLL EI  L
Sbjct: 205 PPEAFMEGIFTSKTDTWSFGVLLWEIFSL 233

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEK--EFKAEVNGIGQTH 557
           ++T G  + +G G+FGTVYKG  +      VAVK LN      ++   FK EV  + +T 
Sbjct: 9   QITVG--QRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 62
Query: 558 HKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           H N++  +GY    Q  ++      +         ++K       +IA   A G+ YLH 
Sbjct: 63  HVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT-LDQSHTNTAIRGTKGYVAPEWFR 676
           +    IIH D+K  NI L +    +I DFGLA + +    SH    + G+  ++APE  R
Sbjct: 123 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 677 NM---PITVKVDVYSYGVLLLEIIC 698
                P + + DVY++G++L E++ 
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMT 204

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 123/274 (44%), Gaps = 29/274 (10%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            +++LG G FG V+    N  +   V   K  S+   S + F AE N +    H  LV+L
Sbjct: 192 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM---SVEAFLAEANVMKTLQHDKLVKL 248
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
                + +   ++ EFM+ G++  FL  D  SK       + +  IA G+ ++ +     
Sbjct: 249 HAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---N 304
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH D++  NIL+      +I+DFGLA+++  ++       +    + APE       T+
Sbjct: 305 YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTI 364
Query: 683 KVDVYSYGVLLLEIICLRRNIDNEIS--KVDKAILTDWAYDRYQERTLEALVENDLEAMN 740
           K DV+S+G+LL+EI+   R     +S  +V +A+   +   R          EN  E + 
Sbjct: 365 KSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR---------PENCPEELY 415
Query: 741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
           N+ M          C +  P  RPT   +  +L+
Sbjct: 416 NIMMR---------CWKNRPEERPTFEYIQSVLD 440

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 97/191 (50%), Gaps = 9/191 (4%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           +LG+G FG V+ G  N   +  VA+K L       E  F  E   + +  H+ LV+L   
Sbjct: 22  KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 78
Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG--IAGGLFYLHEECCTQIIH 625
             E +   +V E+M+ G++  FL G++    +L   + M   IA G+ Y+        +H
Sbjct: 79  VSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER---MNYVH 134
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D++  NIL+ ++   +++DFGLA+L+  ++       +    + APE       T+K D
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 686 VYSYGVLLLEI 696
           V+S+G+LL E+
Sbjct: 195 VWSFGILLTEL 205

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 97/191 (50%), Gaps = 9/191 (4%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           +LG+G FG V+ G  N   +  VA+K L       E  F  E   + +  H+ LV+L   
Sbjct: 22  KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 78
Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG--IAGGLFYLHEECCTQIIH 625
             E +   +V E+M+ G++  FL G++    +L   + M   IA G+ Y+        +H
Sbjct: 79  VSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVER---MNYVH 134
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D++  NIL+ ++   +++DFGLA+L+  ++       +    + APE       T+K D
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 686 VYSYGVLLLEI 696
           V+S+G+LL E+
Sbjct: 195 VWSFGILLTEL 205

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 101/209 (48%), Gaps = 23/209 (11%)
Query: 509 LGRGAFGTVYKGFV----NMGSSNHVAVKKLNSVFQDS-EKEFKAEVNGIGQTHHKNLVR 563
           LG GAFG VY+G V    N  S   VAVK L  V  +  E +F  E   I + +H+N+VR
Sbjct: 39  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIAGGLFYL 615
            +G   +   R ++ E M+ G + SFL  +++P     + +AM         IA G  YL
Sbjct: 99  CIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 616 HEECCTQIIHCDIKPQNILLD---DHYNARISDFGLAKLLTLDQSHTN--TAIRGTKGYV 670
            E      IH DI  +N LL        A+I DFG+A+ +     +     A+   K ++
Sbjct: 158 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVK-WM 213
Query: 671 APEWFRNMPITVKVDVYSYGVLLLEIICL 699
            PE F     T K D +S+GVLL EI  L
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFSL 242

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 81.6 bits (200), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 100/194 (51%), Gaps = 15/194 (7%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           +LG+G FG V+ G  N   +  VA+K L       E  F  E   + +  H+ LV+L   
Sbjct: 25  KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAV 81
Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR--TEIAMGIAGGLFYLHEECCTQIIH 625
             E +   +V E+MS G++  FL G+     +L    ++A  IA G+ Y+        +H
Sbjct: 82  VSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 137
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMPITV 682
            D+   NIL+ ++   +++DFGLA+L+   + +  TA +G K    + APE       T+
Sbjct: 138 RDLAAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 683 KVDVYSYGVLLLEI 696
           K DV+S+G+LL E+
Sbjct: 195 KSDVWSFGILLTEL 208

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 101/209 (48%), Gaps = 23/209 (11%)
Query: 509 LGRGAFGTVYKGFV----NMGSSNHVAVKKLNSVFQDS-EKEFKAEVNGIGQTHHKNLVR 563
           LG GAFG VY+G V    N  S   VAVK L  V  +  E +F  E   I + +H+N+VR
Sbjct: 56  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIAGGLFYL 615
            +G   +   R ++ E M+ G + SFL  +++P     + +AM         IA G  YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYL 174
Query: 616 HEECCTQIIHCDIKPQNILLD---DHYNARISDFGLAKLLTLDQSHTN--TAIRGTKGYV 670
            E      IH DI  +N LL        A+I DFG+A+ +     +     A+   K ++
Sbjct: 175 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK-WM 230
Query: 671 APEWFRNMPITVKVDVYSYGVLLLEIICL 699
            PE F     T K D +S+GVLL EI  L
Sbjct: 231 PPEAFMEGIFTSKTDTWSFGVLLWEIFSL 259

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/209 (34%), Positives = 101/209 (48%), Gaps = 23/209 (11%)
Query: 509 LGRGAFGTVYKGFV----NMGSSNHVAVKKLNSVFQDS-EKEFKAEVNGIGQTHHKNLVR 563
           LG GAFG VY+G V    N  S   VAVK L  V  +  E +F  E   I + +H+N+VR
Sbjct: 79  LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIAGGLFYL 615
            +G   +   R ++ E M+ G + SFL  +++P     + +AM         IA G  YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
Query: 616 HEECCTQIIHCDIKPQNILLD---DHYNARISDFGLAKLLTLDQSHTN--TAIRGTKGYV 670
            E      IH DI  +N LL        A+I DFG+A+ +     +     A+   K ++
Sbjct: 198 EE---NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK-WM 253
Query: 671 APEWFRNMPITVKVDVYSYGVLLLEIICL 699
            PE F     T K D +S+GVLL EI  L
Sbjct: 254 PPEAFMEGIFTSKTDTWSFGVLLWEIFSL 282

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 103/217 (47%), Gaps = 7/217 (3%)
Query: 482 DQGVSYMNLRCFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD 541
           D G   +  +     E+       K +LG G +G VY G V    S  VAVK L     +
Sbjct: 13  DLGTENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVG-VWKKYSLTVAVKTLKEDTME 71
Query: 542 SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR 601
            E EF  E   + +  H NLV+LLG C       +V E+M  G +  +L   ++      
Sbjct: 72  VE-EFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAV 130
Query: 602 TEIAMG--IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT 659
             + M   I+  + YL ++     IH D+  +N L+ +++  +++DFGL++L+T D    
Sbjct: 131 VLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTA 187
Query: 660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEI 696
           +   +    + APE       ++K DV+++GVLL EI
Sbjct: 188 HAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEI 224

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 96/198 (48%), Gaps = 17/198 (8%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSN-HVAVKKLNS-VFQDSEKEFKAEVNGIGQTHHKNLV 562
           FK +LG GAFG V+   V   SS     +K +N    Q   ++ +AE+  +    H N++
Sbjct: 26  FKRKLGSGAFGDVH--LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR----TEIAMGIAGGLFYLHEE 618
           ++    ++  N  +V E    G +   +         L      E+   +   L Y H +
Sbjct: 84  KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143
Query: 619 CCTQIIHCDIKPQNILLDD---HYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF 675
               ++H D+KP+NIL  D   H   +I DFGLA+L   D+  TN A  GT  Y+APE F
Sbjct: 144 ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAA--GTALYMAPEVF 198
Query: 676 RNMPITVKVDVYSYGVLL 693
           +   +T K D++S GV++
Sbjct: 199 KR-DVTFKCDIWSAGVVM 215

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 103/196 (52%), Gaps = 12/196 (6%)
Query: 509 LGRGAFGTVYKG-FVNMGSSNH--VAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG GAFGTVYKG +V  G +    VA+K LN +    +  EF  E   +    H +LVRL
Sbjct: 46  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNW--KLRTEIAMGIAGGLFYLHEECCTQ 622
           LG C     +L V + M +G +  ++  + K N   +L     + IA G+ YL E    +
Sbjct: 106 LGVCLSPTIQL-VTQLMPHGCLLEYVH-EHKDNIGSQLLLNWCVQIAKGMMYLEER---R 160
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT-AIRGTKGYVAPEWFRNMPIT 681
           ++H D+  +N+L+    + +I+DFGLA+LL  D+   N    +    ++A E       T
Sbjct: 161 LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFT 220
Query: 682 VKVDVYSYGVLLLEII 697
            + DV+SYGV + E++
Sbjct: 221 HQSDVWSYGVTIWELM 236

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 103/196 (52%), Gaps = 12/196 (6%)
Query: 509 LGRGAFGTVYKG-FVNMGSSNH--VAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG GAFGTVYKG +V  G +    VA+K LN +    +  EF  E   +    H +LVRL
Sbjct: 23  LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNW--KLRTEIAMGIAGGLFYLHEECCTQ 622
           LG C     +L V + M +G +  ++  + K N   +L     + IA G+ YL E    +
Sbjct: 83  LGVCLSPTIQL-VTQLMPHGCLLEYVH-EHKDNIGSQLLLNWCVQIAKGMMYLEER---R 137
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT-AIRGTKGYVAPEWFRNMPIT 681
           ++H D+  +N+L+    + +I+DFGLA+LL  D+   N    +    ++A E       T
Sbjct: 138 LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFT 197
Query: 682 VKVDVYSYGVLLLEII 697
            + DV+SYGV + E++
Sbjct: 198 HQSDVWSYGVTIWELM 213

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEK--EFKAEVNGIGQTH 557
           ++T G  + +G G+FGTVYKG  +      VAVK LN      ++   FK EV  + +T 
Sbjct: 9   QITVG--QRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 62
Query: 558 HKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           H N++  +GY  + Q  ++      +         ++K       +IA   A G+ YLH 
Sbjct: 63  HVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT-LDQSHTNTAIRGTKGYVAPEWFR 676
           +    IIH D+K  NI L +    +I DFGLA   +    SH    + G+  ++APE  R
Sbjct: 123 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 677 NM---PITVKVDVYSYGVLLLEIIC 698
                P + + DVY++G++L E++ 
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMT 204

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEK--EFKAEVNGIGQTH 557
           ++T G  + +G G+FGTVYKG  +      VAVK LN      ++   FK EV  + +T 
Sbjct: 29  QITVG--QRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 82
Query: 558 HKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           H N++  +GY  + Q  ++      +         ++K       +IA   A G+ YLH 
Sbjct: 83  HVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 142
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT-LDQSHTNTAIRGTKGYVAPEWFR 676
           +    IIH D+K  NI L +    +I DFGLA   +    SH    + G+  ++APE  R
Sbjct: 143 KS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 199
Query: 677 NM---PITVKVDVYSYGVLLLEIIC 698
                P + + DVY++G++L E++ 
Sbjct: 200 MQDKNPYSFQSDVYAFGIVLYELMT 224

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAV-KKLN--SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           +G G++G   K  +   S   + V K+L+  S+ +  ++   +EVN + +  H N+VR  
Sbjct: 14  IGTGSYGRCQK--IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 566 GYCDEGQNRLL--VYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ- 622
               +  N  L  V E+   G +AS +   +K    L  E  + +   L    +EC  + 
Sbjct: 72  DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 623 -----IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                ++H D+KP N+ LD   N ++ DFGLA++L  D S   T + GT  Y++PE    
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPEQMNR 190
Query: 678 MPITVKVDVYSYGVLLLEIICL 699
           M    K D++S G LL E+  L
Sbjct: 191 MSYNEKSDIWSLGCLLYELCAL 212

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 119/297 (40%), Gaps = 41/297 (13%)
Query: 505 FKEELGRGAFGTVY----KGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKN 560
            K ELG GAFG V+       +       VAVK L    + + ++F+ E   +    H++
Sbjct: 45  LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 104
Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT----------------EI 604
           +VR  G C EG+  L+V+E+M +G +  FL     P+ KL                   +
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHG-PDAKLLAGGEDVAPGPLGLGQLLAV 163
Query: 605 AMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLDQSHTNTAI 663
           A  +A G+ YL        +H D+  +N L+      +I DFG+++ + + D        
Sbjct: 164 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 220
Query: 664 RGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRY 723
                ++ PE       T + DV+S+GV+L EI    +    ++S  +         +  
Sbjct: 221 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELE 280
Query: 724 QERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
           + R     V   +                  C Q +P  R +++ V   L+ + + P
Sbjct: 281 RPRACPPEVYAIMRG----------------CWQREPQQRHSIKDVHARLQALAQAP 321

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 80.5 bits (197), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 97/198 (48%), Gaps = 13/198 (6%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEK--EFKAEVNGIGQTHHKNLVRL 564
           + +G G+FGTVYKG  +      VAVK LN      ++   FK EV  + +T H N++  
Sbjct: 42  QRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 97
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
           +GY  + Q  ++      +         ++K       +IA   A G+ YLH +    II
Sbjct: 98  MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---II 154
Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLT-LDQSHTNTAIRGTKGYVAPEWFRNM---PI 680
           H D+K  NI L +    +I DFGLA   +    SH    + G+  ++APE  R     P 
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 681 TVKVDVYSYGVLLLEIIC 698
           + + DVY++G++L E++ 
Sbjct: 215 SFQSDVYAFGIVLYELMT 232

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 119/297 (40%), Gaps = 41/297 (13%)
Query: 505 FKEELGRGAFGTVY----KGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKN 560
            K ELG GAFG V+       +       VAVK L    + + ++F+ E   +    H++
Sbjct: 16  LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 75
Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT----------------EI 604
           +VR  G C EG+  L+V+E+M +G +  FL     P+ KL                   +
Sbjct: 76  IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHG-PDAKLLAGGEDVAPGPLGLGQLLAV 134
Query: 605 AMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLDQSHTNTAI 663
           A  +A G+ YL        +H D+  +N L+      +I DFG+++ + + D        
Sbjct: 135 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 191
Query: 664 RGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRY 723
                ++ PE       T + DV+S+GV+L EI    +    ++S  +         +  
Sbjct: 192 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELE 251
Query: 724 QERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
           + R     V   +                  C Q +P  R +++ V   L+ + + P
Sbjct: 252 RPRACPPEVYAIMRG----------------CWQREPQQRHSIKDVHARLQALAQAP 292

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 119/297 (40%), Gaps = 41/297 (13%)
Query: 505 FKEELGRGAFGTVY----KGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKN 560
            K ELG GAFG V+       +       VAVK L    + + ++F+ E   +    H++
Sbjct: 22  LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 81
Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT----------------EI 604
           +VR  G C EG+  L+V+E+M +G +  FL     P+ KL                   +
Sbjct: 82  IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHG-PDAKLLAGGEDVAPGPLGLGQLLAV 140
Query: 605 AMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLDQSHTNTAI 663
           A  +A G+ YL        +H D+  +N L+      +I DFG+++ + + D        
Sbjct: 141 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 197
Query: 664 RGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRY 723
                ++ PE       T + DV+S+GV+L EI    +    ++S  +         +  
Sbjct: 198 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELE 257
Query: 724 QERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
           + R     V   +                  C Q +P  R +++ V   L+ + + P
Sbjct: 258 RPRACPPEVYAIMRG----------------CWQREPQQRHSIKDVHARLQALAQAP 298

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 100/214 (46%), Gaps = 29/214 (13%)
Query: 505 FKEELGRGAFGTVYKG-FVNMGSSNH---VAVKKLNSVFQDSEKEFKAEVNGIGQTHHKN 560
            K ELG GAFG V+     N+        VAVK L     ++ K+F  E   +    H++
Sbjct: 17  LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASF---------LFGDSKPNWKLRT----EIAMG 607
           +V+  G C EG   ++V+E+M +G +  F         L  +  P  +L       IA  
Sbjct: 77  IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 608 IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLDQ----SHTNTA 662
           IA G+ YL  +     +H D+  +N L+ ++   +I DFG+++ + + D      HT   
Sbjct: 137 IAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 193
Query: 663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEI 696
           IR    ++ PE       T + DV+S GV+L EI
Sbjct: 194 IR----WMPPESIMYRKFTTESDVWSLGVVLWEI 223

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           + LG GA+G V    VN  +   VAVK ++     D  +  K E+      +H+N+V+  
Sbjct: 12  QTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM----GIAGGLFYLHEECCT 621
           G+  EG  + L  E+ S G     LF   +P+  +    A      +  G+ YLH     
Sbjct: 71  GHRREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 123
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPEWFRNMPI 680
            I H DIKP+N+LLD+  N +ISDFGLA +    ++      + GT  YVAPE  +    
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 681 TVK-VDVYSYGVLLLEIIC 698
             + VDV+S G++L  ++ 
Sbjct: 184 HAEPVDVWSCGIVLTAMLA 202

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 100/194 (51%), Gaps = 15/194 (7%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           +LG+G FG V+ G  N   +  VA+K L       E  F  E   + +  H+ LV+L   
Sbjct: 192 KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGNMSPEA-FLQEAQVMKKLRHEKLVQLYAV 248
Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR--TEIAMGIAGGLFYLHEECCTQIIH 625
             E +   +V E+MS G++  FL G+     +L    ++A  IA G+ Y+        +H
Sbjct: 249 VSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER---MNYVH 304
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMPITV 682
            D++  NIL+ ++   +++DFGL +L+   + +  TA +G K    + APE       T+
Sbjct: 305 RDLRAANILVGENLVCKVADFGLGRLI---EDNEYTARQGAKFPIKWTAPEAALYGRFTI 361
Query: 683 KVDVYSYGVLLLEI 696
           K DV+S+G+LL E+
Sbjct: 362 KSDVWSFGILLTEL 375

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 80.1 bits (196), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 100/196 (51%), Gaps = 11/196 (5%)
Query: 508 ELGRGAFGTVYKGFVNMGSSN-HVAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKNLVRLL 565
           ELG G FG+V +G   M      VA+K L    + ++ +E   E   + Q  +  +VRL+
Sbjct: 17  ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSK--PNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           G C + +  +LV E    G +  FL G  +  P   +  E+   ++ G+ YL E+     
Sbjct: 77  GVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNV-AELLHQVSMGMKYLEEK---NF 131
Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH--TNTAIRGTKGYVAPEWFRNMPIT 681
           +H D+  +N+LL + + A+ISDFGL+K L  D S+    +A +    + APE       +
Sbjct: 132 VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 191
Query: 682 VKVDVYSYGVLLLEII 697
            + DV+SYGV + E +
Sbjct: 192 SRSDVWSYGVTMWEAL 207

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 79.7 bits (195), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           + LG GA+G V    VN  +   VAVK ++     D  +  K E+      +H+N+V+  
Sbjct: 13  QTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 71
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM----GIAGGLFYLHEECCT 621
           G+  EG  + L  E+ S G     LF   +P+  +    A      +  G+ YLH     
Sbjct: 72  GHRREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 124
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPEWFRNMPI 680
            I H DIKP+N+LLD+  N +ISDFGLA +    ++      + GT  YVAPE  +    
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 184
Query: 681 TVK-VDVYSYGVLLLEIIC 698
             + VDV+S G++L  ++ 
Sbjct: 185 HAEPVDVWSCGIVLTAMLA 203

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 79.7 bits (195), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 99/196 (50%), Gaps = 10/196 (5%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV---FQDSEKEFKAEVNGIGQTHHKNLVR 563
           + LG G FG V  G   + + + VAVK LN       D   + + E+  +    H ++++
Sbjct: 22  DTLGVGTFGKVKVGKHEL-TGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIK 80
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           L        +  +V E++S G +  ++  + + + K    +   I  G+ Y H      +
Sbjct: 81  LYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH---MV 137
Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR-NMPITV 682
           +H D+KP+N+LLD H NA+I+DFGL+ +++  +    +   G+  Y APE     +    
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC--GSPNYAAPEVISGRLYAGP 195
Query: 683 KVDVYSYGVLLLEIIC 698
           +VD++S GV+L  ++C
Sbjct: 196 EVDIWSSGVILYALLC 211

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 79.7 bits (195), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 114/268 (42%), Gaps = 25/268 (9%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYC 568
           LG G FG V+ G  N   +  VA+K L       E  F  E   + +  H  LV+L    
Sbjct: 17  LGNGQFGEVWMGTWN--GNTKVAIKTLKPGTMSPES-FLEEAQIMKKLKHDKLVQLYAVV 73
Query: 569 DEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR--TEIAMGIAGGLFYLHEECCTQIIHC 626
            E +   +V E+M+ G++  FL        KL    ++A  +A G+ Y+        IH 
Sbjct: 74  SE-EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER---MNYIHR 129
Query: 627 DIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDV 686
           D++  NIL+ +    +I+DFGLA+L+  ++       +    + APE       T+K DV
Sbjct: 130 DLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 687 YSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLH 746
           +S+G+LL E++   R        V    + +       ER        D     +  M+H
Sbjct: 190 WSFGILLTELVTKGR--------VPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMIH 241
Query: 747 RFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
                   C ++DP  RPT   +   LE
Sbjct: 242 --------CWKKDPEERPTFEYLQSFLE 261

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 79.7 bits (195), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 98/197 (49%), Gaps = 15/197 (7%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEK--EFKAEVNGIGQTHHKNLVRLLG 566
           +G G+FGTVYKG         VAVK L  V    E+   F+ EV  + +T H N++  +G
Sbjct: 44  IGSGSFGTVYKG----KWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG 99
Query: 567 YCDEGQNRLLVYEFMSNGTVASFL-FGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           Y  +  N  +V ++    ++   L   ++K       +IA   A G+ YLH      IIH
Sbjct: 100 YMTK-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIH 155
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLT-LDQSHTNTAIRGTKGYVAPEWFR---NMPIT 681
            D+K  NI L +    +I DFGLA + +    S       G+  ++APE  R   N P +
Sbjct: 156 RDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFS 215
Query: 682 VKVDVYSYGVLLLEIIC 698
            + DVYSYG++L E++ 
Sbjct: 216 FQSDVYSYGIVLYELMT 232

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 79.3 bits (194), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           + LG GA+G V    VN  +   VAVK ++     D  +  K E+      +H+N+V+  
Sbjct: 12  QTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM----GIAGGLFYLHEECCT 621
           G+  EG  + L  E+ S G     LF   +P+  +    A      +  G+ YLH     
Sbjct: 71  GHRREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 123
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPEWFRNMPI 680
            I H DIKP+N+LLD+  N +ISDFGLA +    ++      + GT  YVAPE  +    
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 681 TVK-VDVYSYGVLLLEIIC 698
             + VDV+S G++L  ++ 
Sbjct: 184 HAEPVDVWSCGIVLTAMLA 202

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 79.3 bits (194), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           + LG GA+G V    VN  +   VAVK ++     D  +  K E+      +H+N+V+  
Sbjct: 12  QTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM----GIAGGLFYLHEECCT 621
           G+  EG  + L  E+ S G     LF   +P+  +    A      +  G+ YLH     
Sbjct: 71  GHRREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 123
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPEWFRNMPI 680
            I H DIKP+N+LLD+  N +ISDFGLA +    ++      + GT  YVAPE  +    
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 681 TVK-VDVYSYGVLLLEIIC 698
             + VDV+S G++L  ++ 
Sbjct: 184 HAEPVDVWSCGIVLTAMLA 202

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 79.0 bits (193), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           + LG GA+G V    VN  +   VAVK ++     D  +  K E+      +H+N+V+  
Sbjct: 12  QTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM----GIAGGLFYLHEECCT 621
           G+  EG  + L  E+ S G     LF   +P+  +    A      +  G+ YLH     
Sbjct: 71  GHRREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 123
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPEWFRNMPI 680
            I H DIKP+N+LLD+  N +ISDFGLA +    ++      + GT  YVAPE  +    
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 681 TVK-VDVYSYGVLLLEIIC 698
             + VDV+S G++L  ++ 
Sbjct: 184 HAEPVDVWSCGIVLTAMLA 202

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 14/202 (6%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAV-KKLN--SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           +G G++G   K  +   S   + V K+L+  S+ +  ++   +EVN + +  H N+VR  
Sbjct: 14  IGTGSYGRCQK--IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 566 GYCDEGQNRLL--VYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ- 622
               +  N  L  V E+   G +AS +   +K    L  E  + +   L    +EC  + 
Sbjct: 72  DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 623 -----IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                ++H D+KP N+ LD   N ++ DFGLA++L  D S    A  GT  Y++PE    
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAK-AFVGTPYYMSPEQMNR 190
Query: 678 MPITVKVDVYSYGVLLLEIICL 699
           M    K D++S G LL E+  L
Sbjct: 191 MSYNEKSDIWSLGCLLYELCAL 212

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 96/198 (48%), Gaps = 13/198 (6%)
Query: 507 EELGRGAFGTVYKG---FVNMGSSNHVAVKKLNSVFQDSE---KEFKAEVNGIGQTHHKN 560
           ++LG G   TVY      +N+     VA+K +    ++ E   K F+ EV+   Q  H+N
Sbjct: 17  DKLGGGGMSTVYLAEDTILNIK----VAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN 72
Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECC 620
           +V ++   +E     LV E++   T++ ++      +          I  G+ + H+   
Sbjct: 73  IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHD--- 129
Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPI 680
            +I+H DIKPQNIL+D +   +I DFG+AK L+         + GT  Y +PE  +    
Sbjct: 130 MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEAT 189
Query: 681 TVKVDVYSYGVLLLEIIC 698
               D+YS G++L E++ 
Sbjct: 190 DECTDIYSIGIVLYEMLV 207

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           + LG GA+G V    VN  +   VAVK ++     D  +  K E+      +H+N+V+  
Sbjct: 12  QTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM----GIAGGLFYLHEECCT 621
           G+  EG  + L  E+ S G     LF   +P+  +    A      +  G+ YLH     
Sbjct: 71  GHRREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 123
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPEWFRNMPI 680
            I H DIKP+N+LLD+  N +ISDFGLA +    ++      + GT  YVAPE  +    
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 681 TVK-VDVYSYGVLLLEIIC 698
             + VDV+S G++L  ++ 
Sbjct: 184 HAEPVDVWSCGIVLTAMLA 202

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           + LG GA+G V    VN  +   VAVK ++     D  +  K E+      +H+N+V+  
Sbjct: 13  QTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFY 71
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM----GIAGGLFYLHEECCT 621
           G+  EG  + L  E+ S G     LF   +P+  +    A      +  G+ YLH     
Sbjct: 72  GHRREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 124
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPEWFRNMPI 680
            I H DIKP+N+LLD+  N +ISDFGLA +    ++      + GT  YVAPE  +    
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 681 TVK-VDVYSYGVLLLEIIC 698
             + VDV+S G++L  ++ 
Sbjct: 185 HAEPVDVWSCGIVLTAMLA 203

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 100/196 (51%), Gaps = 11/196 (5%)
Query: 508 ELGRGAFGTVYKGFVNMGSSN-HVAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKNLVRLL 565
           ELG G FG+V +G   M      VA+K L    + ++ +E   E   + Q  +  +VRL+
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSK--PNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           G C + +  +LV E    G +  FL G  +  P   +  E+   ++ G+ YL E+     
Sbjct: 403 GVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNV-AELLHQVSMGMKYLEEK---NF 457
Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH--TNTAIRGTKGYVAPEWFRNMPIT 681
           +H ++  +N+LL + + A+ISDFGL+K L  D S+    +A +    + APE       +
Sbjct: 458 VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFS 517
Query: 682 VKVDVYSYGVLLLEII 697
            + DV+SYGV + E +
Sbjct: 518 SRSDVWSYGVTMWEAL 533

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           + LG GA+G V    VN  +   VAVK ++     D  +  K E+      +H+N+V+  
Sbjct: 11  QTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 69
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM----GIAGGLFYLHEECCT 621
           G+  EG  + L  E+ S G     LF   +P+  +    A      +  G+ YLH     
Sbjct: 70  GHRREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 122
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPEWFRNMPI 680
            I H DIKP+N+LLD+  N +ISDFGLA +    ++      + GT  YVAPE  +    
Sbjct: 123 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 182
Query: 681 TVK-VDVYSYGVLLLEIIC 698
             + VDV+S G++L  ++ 
Sbjct: 183 HAEPVDVWSCGIVLTAMLA 201

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           + LG GA+G V    VN  +   VAVK ++     D  +  K E+      +H+N+V+  
Sbjct: 13  QTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM----GIAGGLFYLHEECCT 621
           G+  EG  + L  E+ S G     LF   +P+  +    A      +  G+ YLH     
Sbjct: 72  GHRREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 124
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPEWFRNMPI 680
            I H DIKP+N+LLD+  N +ISDFGLA +    ++      + GT  YVAPE  +    
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 681 TVK-VDVYSYGVLLLEIIC 698
             + VDV+S G++L  ++ 
Sbjct: 185 HAEPVDVWSCGIVLTAMLA 203

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           + LG GA+G V    VN  +   VAVK ++     D  +  K E+      +H+N+V+  
Sbjct: 12  QTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM----GIAGGLFYLHEECCT 621
           G+  EG  + L  E+ S G     LF   +P+  +    A      +  G+ YLH     
Sbjct: 71  GHRREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 123
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPEWFRNMPI 680
            I H DIKP+N+LLD+  N +ISDFGLA +    ++      + GT  YVAPE  +    
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 681 TVK-VDVYSYGVLLLEIIC 698
             + VDV+S G++L  ++ 
Sbjct: 184 HAEPVDVWSCGIVLTAMLA 202

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           + LG GA+G V    VN  +   VAVK ++     D  +  K E+      +H+N+V+  
Sbjct: 12  QTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM----GIAGGLFYLHEECCT 621
           G+  EG  + L  E+ S G     LF   +P+  +    A      +  G+ YLH     
Sbjct: 71  GHRREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 123
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPEWFRNMPI 680
            I H DIKP+N+LLD+  N +ISDFGLA +    ++      + GT  YVAPE  +    
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 681 TVK-VDVYSYGVLLLEIIC 698
             + VDV+S G++L  ++ 
Sbjct: 184 HAEPVDVWSCGIVLTAMLA 202

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           + LG GA+G V    VN  +   VAVK ++     D  +  K E+      +H+N+V+  
Sbjct: 13  QTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM----GIAGGLFYLHEECCT 621
           G+  EG  + L  E+ S G     LF   +P+  +    A      +  G+ YLH     
Sbjct: 72  GHRREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 124
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPEWFRNMPI 680
            I H DIKP+N+LLD+  N +ISDFGLA +    ++      + GT  YVAPE  +    
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 681 TVK-VDVYSYGVLLLEIIC 698
             + VDV+S G++L  ++ 
Sbjct: 185 HAEPVDVWSCGIVLTAMLA 203

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           + LG GA+G V    VN  +   VAVK ++     D  +  K E+      +H+N+V+  
Sbjct: 13  QTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM----GIAGGLFYLHEECCT 621
           G+  EG  + L  E+ S G     LF   +P+  +    A      +  G+ YLH     
Sbjct: 72  GHRREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 124
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPEWFRNMPI 680
            I H DIKP+N+LLD+  N +ISDFGLA +    ++      + GT  YVAPE  +    
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 681 TVK-VDVYSYGVLLLEIIC 698
             + VDV+S G++L  ++ 
Sbjct: 185 HAEPVDVWSCGIVLTAMLA 203

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           + LG GA+G V    VN  +   VAVK ++     D  +  K E+      +H+N+V+  
Sbjct: 13  QTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM----GIAGGLFYLHEECCT 621
           G+  EG  + L  E+ S G     LF   +P+  +    A      +  G+ YLH     
Sbjct: 72  GHRREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 124
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPEWFRNMPI 680
            I H DIKP+N+LLD+  N +ISDFGLA +    ++      + GT  YVAPE  +    
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 681 TVK-VDVYSYGVLLLEIIC 698
             + VDV+S G++L  ++ 
Sbjct: 185 HAEPVDVWSCGIVLTAMLA 203

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           + LG GA+G V    VN  +   VAVK ++     D  +  K E+      +H+N+V+  
Sbjct: 12  QTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM----GIAGGLFYLHEECCT 621
           G+  EG  + L  E+ S G     LF   +P+  +    A      +  G+ YLH     
Sbjct: 71  GHRREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 123
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPEWFRNMPI 680
            I H DIKP+N+LLD+  N +ISDFGLA +    ++      + GT  YVAPE  +    
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 681 TVK-VDVYSYGVLLLEIIC 698
             + VDV+S G++L  ++ 
Sbjct: 184 HAEPVDVWSCGIVLTAMLA 202

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           + LG GA+G V    VN  +   VAVK ++     D  +  K E+      +H+N+V+  
Sbjct: 13  QTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM----GIAGGLFYLHEECCT 621
           G+  EG  + L  E+ S G     LF   +P+  +    A      +  G+ YLH     
Sbjct: 72  GHRREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 124
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPEWFRNMPI 680
            I H DIKP+N+LLD+  N +ISDFGLA +    ++      + GT  YVAPE  +    
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 681 TVK-VDVYSYGVLLLEIIC 698
             + VDV+S G++L  ++ 
Sbjct: 185 HAEPVDVWSCGIVLTAMLA 203

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           + LG GA+G V    VN  +   VAVK ++     D  +  K E+      +H+N+V+  
Sbjct: 12  QTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM----GIAGGLFYLHEECCT 621
           G+  EG  + L  E+ S G     LF   +P+  +    A      +  G+ YLH     
Sbjct: 71  GHRREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 123
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPEWFRNMPI 680
            I H DIKP+N+LLD+  N +ISDFGLA +    ++      + GT  YVAPE  +    
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 681 TVK-VDVYSYGVLLLEIIC 698
             + VDV+S G++L  ++ 
Sbjct: 184 HAEPVDVWSCGIVLTAMLA 202

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           + LG GA+G V    VN  +   VAVK ++     D  +  K E+      +H+N+V+  
Sbjct: 13  QTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM----GIAGGLFYLHEECCT 621
           G+  EG  + L  E+ S G     LF   +P+  +    A      +  G+ YLH     
Sbjct: 72  GHRREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 124
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPEWFRNMPI 680
            I H DIKP+N+LLD+  N +ISDFGLA +    ++      + GT  YVAPE  +    
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 681 TVK-VDVYSYGVLLLEIIC 698
             + VDV+S G++L  ++ 
Sbjct: 185 HAEPVDVWSCGIVLTAMLA 203

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           + LG GA+G V    VN  +   VAVK ++     D  +  K E+      +H+N+V+  
Sbjct: 12  QTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM----GIAGGLFYLHEECCT 621
           G+  EG  + L  E+ S G     LF   +P+  +    A      +  G+ YLH     
Sbjct: 71  GHRREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 123
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPEWFRNMPI 680
            I H DIKP+N+LLD+  N +ISDFGLA +    ++      + GT  YVAPE  +    
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 681 TVK-VDVYSYGVLLLEIIC 698
             + VDV+S G++L  ++ 
Sbjct: 184 HAEPVDVWSCGIVLTAMLA 202

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 115/257 (44%), Gaps = 42/257 (16%)
Query: 482 DQGVSYMNLRCFTYKELVEVTRG---FKEELGRGAFGTVYK----GFVNMGSSNHVAVKK 534
           D    Y++ R + Y    E  R    F + LG GAFG V      G    G S  VAVK 
Sbjct: 23  DNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKM 82
Query: 535 LNSVFQDSEKE-FKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFL-- 590
           L      SE+E   +E+  + Q   H+N+V LLG C       L++E+   G + ++L  
Sbjct: 83  LKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRS 142
Query: 591 ----FGDSKPNW----KLRTE-------------IAMGIAGGLFYLHEECCTQIIHCDIK 629
               F + +  +    +L  E              A  +A G+ +L  + C   +H D+ 
Sbjct: 143 KREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC---VHRDLA 199
Query: 630 PQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK----GYVAPEWFRNMPITVKVD 685
            +N+L+      +I DFGLA+ +  D   +N  +RG       ++APE       T+K D
Sbjct: 200 ARNVLVTHGKVVKICDFGLARDIMSD---SNYVVRGNARLPVKWMAPESLFEGIYTIKSD 256
Query: 686 VYSYGVLLLEIICLRRN 702
           V+SYG+LL EI  L  N
Sbjct: 257 VWSYGILLWEIFSLGVN 273

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 14/202 (6%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAV-KKLN--SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           +G G++G   K  +   S   + V K+L+  S+ +  ++   +EVN + +  H N+VR  
Sbjct: 14  IGTGSYGRCQK--IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYY 71
Query: 566 GYCDEGQNRLL--VYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ- 622
               +  N  L  V E+   G +AS +   +K    L  E  + +   L    +EC  + 
Sbjct: 72  DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 623 -----IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                ++H D+KP N+ LD   N ++ DFGLA++L  D+      + GT  Y++PE    
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV-GTPYYMSPEQMNR 190
Query: 678 MPITVKVDVYSYGVLLLEIICL 699
           M    K D++S G LL E+  L
Sbjct: 191 MSYNEKSDIWSLGCLLYELCAL 212

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 15/199 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           + LG GA+G V    VN  +   VAVK ++     D  +  K E+      +H+N+V+  
Sbjct: 12  QTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM----GIAGGLFYLHEECCT 621
           G+  EG  + L  E+ S G     LF   +P+  +    A      +  G+ YLH     
Sbjct: 71  GHRREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 123
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPEWFRNMPI 680
            I H DIKP+N+LLD+  N +ISDFGLA +    ++      + GT  YVAPE  +    
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 681 TVK-VDVYSYGVLLLEIIC 698
             + VDV+S G++L  ++ 
Sbjct: 184 HAEPVDVWSCGIVLTAMLA 202

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 15/198 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           + +G+G FG V  G       N VAVK + +    + + F AE + + Q  H NLV+LLG
Sbjct: 18  QTIGKGEFGDVMLGDYR---GNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLG 72
Query: 567 YCDEGQNRL-LVYEFMSNGTVASFLF--GDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
              E +  L +V E+M+ G++  +L   G S        + ++ +   + YL        
Sbjct: 73  VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNF 129
Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVK 683
           +H D+  +N+L+ +   A++SDFGL K  +  Q      ++    + APE  R    + K
Sbjct: 130 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK----WTAPEALREAAFSTK 185
Query: 684 VDVYSYGVLLLEIICLRR 701
            DV+S+G+LL EI    R
Sbjct: 186 SDVWSFGILLWEIYSFGR 203

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 97/198 (48%), Gaps = 15/198 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           + +G+G FG V  G       N VAVK + +    + + F AE + + Q  H NLV+LLG
Sbjct: 199 QTIGKGEFGDVMLGDYR---GNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLG 253
Query: 567 YCDEGQNRL-LVYEFMSNGTVASFLF--GDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
              E +  L +V E+M+ G++  +L   G S        + ++ +   + YL        
Sbjct: 254 VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNF 310
Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVK 683
           +H D+  +N+L+ +   A++SDFGL K  +  Q      ++ T    APE  R    + K
Sbjct: 311 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTK 366
Query: 684 VDVYSYGVLLLEIICLRR 701
            DV+S+G+LL EI    R
Sbjct: 367 SDVWSFGILLWEIYSFGR 384

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 97/198 (48%), Gaps = 15/198 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           + +G+G FG V  G       N VAVK + +    + + F AE + + Q  H NLV+LLG
Sbjct: 27  QTIGKGEFGDVMLGDYR---GNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLG 81
Query: 567 YCDEGQNRL-LVYEFMSNGTVASFLF--GDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
              E +  L +V E+M+ G++  +L   G S        + ++ +   + YL        
Sbjct: 82  VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNF 138
Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVK 683
           +H D+  +N+L+ +   A++SDFGL K  +  Q      ++ T    APE  R    + K
Sbjct: 139 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTK 194
Query: 684 VDVYSYGVLLLEIICLRR 701
            DV+S+G+LL EI    R
Sbjct: 195 SDVWSFGILLWEIYSFGR 212

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 34/219 (15%)
Query: 505 FKEELGRGAFGTVYKGFVNM-GSSNHVAVKKLNS-VFQDSEKEFKAEVNGIGQT-HHKNL 561
           F++ +G G FG V K  +   G     A+K++     +D  ++F  E+  + +  HH N+
Sbjct: 19  FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 78
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFG----DSKPNWKLRT------------EIA 605
           + LLG C+      L  E+  +G +  FL      ++ P + +                A
Sbjct: 79  INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 138
Query: 606 MGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRG 665
             +A G+ YL ++   Q IH D+  +NIL+ ++Y A+I+DFGL++            ++ 
Sbjct: 139 ADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR-------GQEVYVKK 188
Query: 666 TKGYVAPEWFRNMPITVKV-----DVYSYGVLLLEIICL 699
           T G +   W     +   V     DV+SYGVLL EI+ L
Sbjct: 189 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSL 227

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 97/198 (48%), Gaps = 15/198 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           + +G+G FG V  G       N VAVK + +    + + F AE + + Q  H NLV+LLG
Sbjct: 12  QTIGKGEFGDVMLGDYR---GNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLG 66
Query: 567 YCDEGQNRL-LVYEFMSNGTVASFLF--GDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
              E +  L +V E+M+ G++  +L   G S        + ++ +   + YL        
Sbjct: 67  VIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNF 123
Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVK 683
           +H D+  +N+L+ +   A++SDFGL K  +  Q      ++ T    APE  R    + K
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFSTK 179
Query: 684 VDVYSYGVLLLEIICLRR 701
            DV+S+G+LL EI    R
Sbjct: 180 SDVWSFGILLWEIYSFGR 197

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 34/219 (15%)
Query: 505 FKEELGRGAFGTVYKGFVNM-GSSNHVAVKKLNS-VFQDSEKEFKAEVNGIGQT-HHKNL 561
           F++ +G G FG V K  +   G     A+K++     +D  ++F  E+  + +  HH N+
Sbjct: 29  FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 88
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFG----DSKPNWKLRT------------EIA 605
           + LLG C+      L  E+  +G +  FL      ++ P + +                A
Sbjct: 89  INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148
Query: 606 MGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRG 665
             +A G+ YL ++   Q IH D+  +NIL+ ++Y A+I+DFGL++            ++ 
Sbjct: 149 ADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR-------GQEVYVKK 198
Query: 666 TKGYVAPEWFRNMPITVKV-----DVYSYGVLLLEIICL 699
           T G +   W     +   V     DV+SYGVLL EI+ L
Sbjct: 199 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSL 237

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 100/217 (46%), Gaps = 32/217 (14%)
Query: 505 FKEELGRGAFGTVYKG-FVNMGSSNH---VAVKKLNSVFQDSEKEFKAEVNGIGQTHHKN 560
            K ELG GAFG V+     N+  +     VAVK L      + K+F+ E   +    H++
Sbjct: 19  LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFL---------FGDSKP-------NWKLRTEI 604
           +V+  G C +G   ++V+E+M +G +  FL           D +P              I
Sbjct: 79  IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 605 AMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLDQ----SHT 659
           A  IA G+ YL  +     +H D+  +N L+  +   +I DFG+++ + + D      HT
Sbjct: 139 ASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHT 195
Query: 660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEI 696
              IR    ++ PE       T + DV+S+GV+L EI
Sbjct: 196 MLPIR----WMPPESIMYRKFTTESDVWSFGVILWEI 228

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 11/202 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLL 565
           LG G+FG V   + +  +   VA+K +N       D +   + E++ +    H ++++L 
Sbjct: 12  LGEGSFGKVKLAY-HTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 70
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
                    ++V E+  N      +  D     + R      I   + Y H     +I+H
Sbjct: 71  DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCHRH---KIVH 126
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR-NMPITVKV 684
            D+KP+N+LLD+H N +I+DFGL+ ++T D +   T+  G+  Y APE     +    +V
Sbjct: 127 RDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSC-GSPNYAAPEVISGKLYAGPEV 184
Query: 685 DVYSYGVLLLEIICLRRNIDNE 706
           DV+S GV+L  ++C R   D+E
Sbjct: 185 DVWSCGVILYVMLCRRLPFDDE 206

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 11/202 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLL 565
           LG G+FG V   + +  +   VA+K +N       D +   + E++ +    H ++++L 
Sbjct: 16  LGEGSFGKVKLAY-HTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 74
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
                    ++V E+  N      +  D     + R      I   + Y H     +I+H
Sbjct: 75  DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCHRH---KIVH 130
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR-NMPITVKV 684
            D+KP+N+LLD+H N +I+DFGL+ ++T D +   T+  G+  Y APE     +    +V
Sbjct: 131 RDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSC-GSPNYAAPEVISGKLYAGPEV 188
Query: 685 DVYSYGVLLLEIICLRRNIDNE 706
           DV+S GV+L  ++C R   D+E
Sbjct: 189 DVWSCGVILYVMLCRRLPFDDE 210

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVA--VKKLNSVFQD---SEKEFKAEVNGIGQTHHKNL 561
           EELG G F  V K         + A  +KK  +       S ++ + EV+ + +  H N+
Sbjct: 17  EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           + L    +   + +L+ E ++ G +  FL        +  TE    I  G++YLH     
Sbjct: 77  ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 622 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
           QI H D+KP+NI+L D        +I DFGLA  +       N  I GT  +VAPE    
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPAFVAPEIVNY 191
Query: 678 MPITVKVDVYSYGVL 692
            P+ ++ D++S GV+
Sbjct: 192 EPLGLEADMWSIGVI 206

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 97/199 (48%), Gaps = 15/199 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           + LG GA G V    VN  +   VAVK ++     D  +  K E+      +H+N+V+  
Sbjct: 12  QTLGEGAAGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM----GIAGGLFYLHEECCT 621
           G+  EG  + L  E+ S G     LF   +P+  +    A      +  G+ YLH     
Sbjct: 71  GHRREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GI 123
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPEWFRNMPI 680
            I H DIKP+N+LLD+  N +ISDFGLA +    ++      + GT  YVAPE  +    
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 681 TVK-VDVYSYGVLLLEIIC 698
             + VDV+S G++L  ++ 
Sbjct: 184 HAEPVDVWSCGIVLTAMLA 202

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 127/267 (47%), Gaps = 26/267 (9%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           E +G+G+FG V+KG  N  +   VA+K ++    +D  ++ + E+  + Q     + +  
Sbjct: 29  ERIGKGSFGEVFKGIDNR-TQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYY 87
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           G   +G    ++ E++  G+    L       +++ T +   I  GL YLH E   + IH
Sbjct: 88  GSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLK-EILKGLDYLHSE---KKIH 143
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            DIK  N+LL +  + +++DFG+A  LT  Q   NT + GT  ++APE  +      K D
Sbjct: 144 RDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQSAYDSKAD 202
Query: 686 VYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM-NNVTM 744
           ++S G+  +E+   +    N               D +  R L  + +N+   +  + T 
Sbjct: 203 IWSLGITAIELA--KGEPPNS--------------DMHPMRVLFLIPKNNPPTLVGDFTK 246
Query: 745 LHRFVMVAFWCIQEDPSHRPTMRKVTQ 771
             +  + A  C+ +DPS RPT +++ +
Sbjct: 247 SFKEFIDA--CLNKDPSFRPTAKELLK 271

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 11/202 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLL 565
           LG G+FG V   + +  +   VA+K +N       D +   + E++ +    H ++++L 
Sbjct: 21  LGEGSFGKVKLAY-HTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 79
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
                    ++V E+  N      +  D     + R      I   + Y H     +I+H
Sbjct: 80  DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCHRH---KIVH 135
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR-NMPITVKV 684
            D+KP+N+LLD+H N +I+DFGL+ ++T D +   T+  G+  Y APE     +    +V
Sbjct: 136 RDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSC-GSPNYAAPEVISGKLYAGPEV 193
Query: 685 DVYSYGVLLLEIICLRRNIDNE 706
           DV+S GV+L  ++C R   D+E
Sbjct: 194 DVWSCGVILYVMLCRRLPFDDE 215

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 11/202 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLL 565
           LG G+FG V   + +  +   VA+K +N       D +   + E++ +    H ++++L 
Sbjct: 22  LGEGSFGKVKLAY-HTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 80
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
                    ++V E+  N      +  D     + R      I   + Y H     +I+H
Sbjct: 81  DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEAR-RFFQQIISAVEYCHRH---KIVH 136
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR-NMPITVKV 684
            D+KP+N+LLD+H N +I+DFGL+ ++T D +   T+  G+  Y APE     +    +V
Sbjct: 137 RDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSC-GSPNYAAPEVISGKLYAGPEV 194
Query: 685 DVYSYGVLLLEIICLRRNIDNE 706
           DV+S GV+L  ++C R   D+E
Sbjct: 195 DVWSCGVILYVMLCRRLPFDDE 216

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 76.3 bits (186), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 25/265 (9%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           F +ELG G FG V  G         VA+K +      SE EF  E   +    H+ LV+L
Sbjct: 28  FLKELGTGQFGVVKYG--KWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQL 84
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYLHEECCTQ 622
            G C + +   ++ E+M+NG + ++L  + +  ++ +   E+   +   + YL  +   Q
Sbjct: 85  YGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESK---Q 140
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            +H D+  +N L++D    ++SDFGL++ +  D+  ++   +    +  PE       + 
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSS 200
Query: 683 KVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV 742
           K D++++GVL+ EI  L +                  Y+R+        +   L      
Sbjct: 201 KSDIWAFGVLMWEIYSLGKM----------------PYERFTNSETAEHIAQGLRLYRPH 244
Query: 743 TMLHRFVMVAFWCIQEDPSHRPTMR 767
               +   + + C  E    RPT +
Sbjct: 245 LASEKVYTIMYSCWHEKADERPTFK 269

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 132/304 (43%), Gaps = 61/304 (20%)
Query: 505 FKEELGRGAFGTVYK----GFVNMGSSNHVAVKKLNSVFQDSEKE-FKAEVNGIGQT-HH 558
           F + LG GAFG V +    G +   ++  VAVK L      +E+E   +E+  +    +H
Sbjct: 50  FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFL------FGDSKPNWKL------------ 600
            N+V LLG C  G   L++ E+   G + +FL      F  SK +  +            
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 601 RTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN 660
               +  +A G+ +L  + C   IH D+  +NILL      +I DFGLA+ +  D   +N
Sbjct: 170 LLSFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARHIKND---SN 223
Query: 661 TAIRGTK----GYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRN------IDNEISKV 710
             ++G       ++APE   N   T + DV+SYG+ L E+  L  +      +D++  K+
Sbjct: 224 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 283
Query: 711 DKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVT 770
            K        + ++  + E       + M               C   DP  RPT +++ 
Sbjct: 284 IK--------EGFRMLSPEHAPAEMYDIMKT-------------CWDADPLKRPTFKQIV 322
Query: 771 QMLE 774
           Q++E
Sbjct: 323 QLIE 326

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           ELG GAFG VYK   N  +S   A K +++  ++  +++  E++ +    H N+V+LL  
Sbjct: 44  ELGDGAFGKVYKA-QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIA-MGIAGGLFYLHEECCTQIIHC 626
                N  ++ EF + G V + +    +P  + + ++        L YLH+    +IIH 
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD---NKIIHR 159
Query: 627 DIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF-----RNMPIT 681
           D+K  NIL     + +++DFG++   T      ++ I GT  ++APE       ++ P  
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI-GTPYWMAPEVVMCETSKDRPYD 218
Query: 682 VKVDVYSYGVLLLEI 696
            K DV+S G+ L+E+
Sbjct: 219 YKADVWSLGITLIEM 233

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 98/200 (49%), Gaps = 11/200 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH---VAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F ++LG+G FG+V     +    N    VAVKKL    ++  ++F+ E+  +    H N+
Sbjct: 17  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 562 VRLLGYCDEG--QNRLLVYEFMSNGTVASFLFGDSKPNWKLRT-EIAMGIAGGLFYLHEE 618
           V+  G C     +N  L+ E++  G++  +L   ++    ++  +    I  G+ YL   
Sbjct: 77  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYL--- 133
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG--YVAPEWFR 676
              + IH D+  +NIL+++    +I DFGL K+L  D+        G     + APE   
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 677 NMPITVKVDVYSYGVLLLEI 696
               +V  DV+S+GV+L E+
Sbjct: 194 ESKFSVASDVWSFGVVLYEL 213

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 99/195 (50%), Gaps = 11/195 (5%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           ELG GAFG VYK   N  +S   A K +++  ++  +++  E++ +    H N+V+LL  
Sbjct: 44  ELGDGAFGKVYKA-QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIA-MGIAGGLFYLHEECCTQIIHC 626
                N  ++ EF + G V + +    +P  + + ++        L YLH+    +IIH 
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD---NKIIHR 159
Query: 627 DIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF-----RNMPIT 681
           D+K  NIL     + +++DFG++   T      ++ I GT  ++APE       ++ P  
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI-GTPYWMAPEVVMCETSKDRPYD 218
Query: 682 VKVDVYSYGVLLLEI 696
            K DV+S G+ L+E+
Sbjct: 219 YKADVWSLGITLIEM 233

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 132/304 (43%), Gaps = 61/304 (20%)
Query: 505 FKEELGRGAFGTVYK----GFVNMGSSNHVAVKKLNSVFQDSEKE-FKAEVNGIGQT-HH 558
           F + LG GAFG V +    G +   ++  VAVK L      +E+E   +E+  +    +H
Sbjct: 27  FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 86
Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFL------FGDSKPNWKL------------ 600
            N+V LLG C  G   L++ E+   G + +FL      F  SK +  +            
Sbjct: 87  MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146
Query: 601 RTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN 660
               +  +A G+ +L  + C   IH D+  +NILL      +I DFGLA+ +  D   +N
Sbjct: 147 LLSFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARDIKND---SN 200
Query: 661 TAIRGTK----GYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRN------IDNEISKV 710
             ++G       ++APE   N   T + DV+SYG+ L E+  L  +      +D++  K+
Sbjct: 201 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 260
Query: 711 DKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVT 770
            K        + ++  + E       + M               C   DP  RPT +++ 
Sbjct: 261 IK--------EGFRMLSPEHAPAEMYDIMKT-------------CWDADPLKRPTFKQIV 299
Query: 771 QMLE 774
           Q++E
Sbjct: 300 QLIE 303

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 75.9 bits (185), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 98/207 (47%), Gaps = 14/207 (6%)
Query: 495 YKELVEVTRGFKEELGRGAFGTV----YKGFVNMGSSNHVAVKKLNSVFQD-SEKEFKAE 549
           ++ +VE      EELG G F  V     KG     ++  +  ++L S  +  S +E + E
Sbjct: 20  FQSMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIERE 79
Query: 550 VNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIA 609
           VN + +  H N++ L    +   + +L+ E +S G +  FL           T+    I 
Sbjct: 80  VNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQIL 139
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHY--NARIS--DFGLAKLLTLDQSHTNTAIRG 665
            G+ YLH     +I H D+KP+NI+L D    N RI   DFG+A  +       N  I G
Sbjct: 140 DGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN--IFG 194
Query: 666 TKGYVAPEWFRNMPITVKVDVYSYGVL 692
           T  +VAPE     P+ ++ D++S GV+
Sbjct: 195 TPEFVAPEIVNYEPLGLEADMWSIGVI 221

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 132/304 (43%), Gaps = 61/304 (20%)
Query: 505 FKEELGRGAFGTVYK----GFVNMGSSNHVAVKKLNSVFQDSEKE-FKAEVNGIGQT-HH 558
           F + LG GAFG V +    G +   ++  VAVK L      +E+E   +E+  +    +H
Sbjct: 45  FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 104
Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFL------FGDSKPNWKL------------ 600
            N+V LLG C  G   L++ E+   G + +FL      F  SK +  +            
Sbjct: 105 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 164
Query: 601 RTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN 660
               +  +A G+ +L  + C   IH D+  +NILL      +I DFGLA+ +  D   +N
Sbjct: 165 LLSFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARDIKND---SN 218
Query: 661 TAIRGTK----GYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRN------IDNEISKV 710
             ++G       ++APE   N   T + DV+SYG+ L E+  L  +      +D++  K+
Sbjct: 219 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 278
Query: 711 DKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVT 770
            K        + ++  + E       + M               C   DP  RPT +++ 
Sbjct: 279 IK--------EGFRMLSPEHAPAEMYDIMKT-------------CWDADPLKRPTFKQIV 317
Query: 771 QMLE 774
           Q++E
Sbjct: 318 QLIE 321

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVA--VKKLNSVFQD---SEKEFKAEVNGIGQTHHKNL 561
           EELG G F  V K         + A  +KK  +       S ++ + EV+ + +  H N+
Sbjct: 17  EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           + L    +   + +L+ E ++ G +  FL        +  TE    I  G++YLH     
Sbjct: 77  ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 622 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
           QI H D+KP+NI+L D        +I DFGLA  +       N  I GT  +VAPE    
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIVNY 191
Query: 678 MPITVKVDVYSYGVL 692
            P+ ++ D++S GV+
Sbjct: 192 EPLGLEADMWSIGVI 206

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 25/265 (9%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           F +ELG G FG V  G         VA+K +      SE EF  E   +    H+ LV+L
Sbjct: 28  FLKELGTGQFGVVKYG--KWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQL 84
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYLHEECCTQ 622
            G C + +   ++ E+M+NG + ++L  + +  ++ +   E+   +   + YL  +   Q
Sbjct: 85  YGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESK---Q 140
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            +H D+  +N L++D    ++SDFGL++ +  D+  ++   +    +  PE       + 
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 200
Query: 683 KVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV 742
           K D++++GVL+ EI  L +                  Y+R+        +   L      
Sbjct: 201 KSDIWAFGVLMWEIYSLGKM----------------PYERFTNSETAEHIAQGLRLYRPH 244
Query: 743 TMLHRFVMVAFWCIQEDPSHRPTMR 767
               +   + + C  E    RPT +
Sbjct: 245 LASEKVYTIMYSCWHEKADERPTFK 269

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 34/219 (15%)
Query: 505 FKEELGRGAFGTVYKGFVNM-GSSNHVAVKKLNS-VFQDSEKEFKAEVNGIGQT-HHKNL 561
           F++ +G G FG V K  +   G     A+K++     +D  ++F  E+  + +  HH N+
Sbjct: 26  FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 85
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFG----DSKPNWKLRT------------EIA 605
           + LLG C+      L  E+  +G +  FL      ++ P + +                A
Sbjct: 86  INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 145
Query: 606 MGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRG 665
             +A G+ YL ++   Q IH ++  +NIL+ ++Y A+I+DFGL++            ++ 
Sbjct: 146 ADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSR-------GQEVYVKK 195
Query: 666 TKGYVAPEWFRNMPITVKV-----DVYSYGVLLLEIICL 699
           T G +   W     +   V     DV+SYGVLL EI+ L
Sbjct: 196 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSL 234

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 97/204 (47%), Gaps = 14/204 (6%)
Query: 498 LVEVTRGFKEELGRGAFGTV----YKGFVNMGSSNHVAVKKLNSVFQD-SEKEFKAEVNG 552
           +VE      EELG G F  V     KG     ++  +  ++L+S  +  S +E + EVN 
Sbjct: 2   MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61
Query: 553 IGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGL 612
           + +  H N++ L    +   + +L+ E +S G +  FL           T+    I  G+
Sbjct: 62  LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 121
Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHY--NARIS--DFGLAKLLTLDQSHTNTAIRGTKG 668
            YLH     +I H D+KP+NI+L D    N RI   DFG+A  +       N  I GT  
Sbjct: 122 HYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN--IFGTPE 176
Query: 669 YVAPEWFRNMPITVKVDVYSYGVL 692
           +VAPE     P+ ++ D++S GV+
Sbjct: 177 FVAPEIVNYEPLGLEADMWSIGVI 200

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 97/191 (50%), Gaps = 6/191 (3%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           E++G+GA GTVY    ++ +   VA++++N   Q  ++    E+  + +  + N+V  L 
Sbjct: 26  EKIGQGASGTVYTAM-DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD 84
Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHC 626
               G    +V E+++ G++   +        ++   +       L +LH     Q+IH 
Sbjct: 85  SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI-AAVCRECLQALEFLH---SNQVIHR 140
Query: 627 DIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDV 686
           DIK  NILL    + +++DFG    +T +QS  +T + GT  ++APE         KVD+
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDI 199
Query: 687 YSYGVLLLEII 697
           +S G++ +E+I
Sbjct: 200 WSLGIMAIEMI 210

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 132/304 (43%), Gaps = 61/304 (20%)
Query: 505 FKEELGRGAFGTVYK----GFVNMGSSNHVAVKKLNSVFQDSEKE-FKAEVNGIGQT-HH 558
           F + LG GAFG V +    G +   ++  VAVK L      +E+E   +E+  +    +H
Sbjct: 43  FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 102
Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFL------FGDSKPNWKL------------ 600
            N+V LLG C  G   L++ E+   G + +FL      F  SK +  +            
Sbjct: 103 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 162
Query: 601 RTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN 660
               +  +A G+ +L  + C   IH D+  +NILL      +I DFGLA+ +  D   +N
Sbjct: 163 LLSFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARDIKND---SN 216
Query: 661 TAIRGTK----GYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRN------IDNEISKV 710
             ++G       ++APE   N   T + DV+SYG+ L E+  L  +      +D++  K+
Sbjct: 217 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 276
Query: 711 DKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVT 770
            K        + ++  + E       + M               C   DP  RPT +++ 
Sbjct: 277 IK--------EGFRMLSPEHAPAEMYDIMKT-------------CWDADPLKRPTFKQIV 315
Query: 771 QMLE 774
           Q++E
Sbjct: 316 QLIE 319

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 132/304 (43%), Gaps = 61/304 (20%)
Query: 505 FKEELGRGAFGTVYK----GFVNMGSSNHVAVKKLNSVFQDSEKE-FKAEVNGIGQT-HH 558
           F + LG GAFG V +    G +   ++  VAVK L      +E+E   +E+  +    +H
Sbjct: 50  FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFL------FGDSKPNWKL------------ 600
            N+V LLG C  G   L++ E+   G + +FL      F  SK +  +            
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 601 RTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN 660
               +  +A G+ +L  + C   IH D+  +NILL      +I DFGLA+ +  D   +N
Sbjct: 170 LLSFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARDIKND---SN 223
Query: 661 TAIRGTK----GYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRN------IDNEISKV 710
             ++G       ++APE   N   T + DV+SYG+ L E+  L  +      +D++  K+
Sbjct: 224 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 283
Query: 711 DKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVT 770
            K        + ++  + E       + M               C   DP  RPT +++ 
Sbjct: 284 IK--------EGFRMLSPEHAPAEMYDIMKT-------------CWDADPLKRPTFKQIV 322
Query: 771 QMLE 774
           Q++E
Sbjct: 323 QLIE 326

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 120/274 (43%), Gaps = 39/274 (14%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            +++LG G FG V+    N  +   V   K  S+   S + F AE N +    H  LV+L
Sbjct: 186 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM---SVEAFLAEANVMKTLQHDKLVKL 242
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
                + +   ++ EFM+ G++  FL  D  SK       + +  IA G+ ++ +     
Sbjct: 243 HAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---N 298
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH D++  NIL+      +I+DFGLA++            +    + APE       T+
Sbjct: 299 YIHRDLRAANILVSASLVCKIADFGLARV----------GAKFPIKWTAPEAINFGSFTI 348
Query: 683 KVDVYSYGVLLLEIICLRRNIDNEIS--KVDKAILTDWAYDRYQERTLEALVENDLEAMN 740
           K DV+S+G+LL+EI+   R     +S  +V +A+   +   R          EN  E + 
Sbjct: 349 KSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR---------PENCPEELY 399
Query: 741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
           N+ M          C +  P  RPT   +  +L+
Sbjct: 400 NIMMR---------CWKNRPEERPTFEYIQSVLD 424

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 119/268 (44%), Gaps = 31/268 (11%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           F +ELG G FG V  G         VA+K +      SE EF  E   +    H+ LV+L
Sbjct: 13  FLKELGTGQFGVVKYG--KWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQL 69
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYLHEECCTQ 622
            G C + +   ++ E+M+NG + ++L  + +  ++ +   E+   +   + YL  +   Q
Sbjct: 70  YGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESK---Q 125
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMP 679
            +H D+  +N L++D    ++SDFGL++ + LD  +T++  RG+K    +  PE      
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSS--RGSKFPVRWSPPEVLMYSK 182
Query: 680 ITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM 739
            + K D++++GVL+ EI  L +                  Y+R+        +   L   
Sbjct: 183 FSSKSDIWAFGVLMWEIYSLGKM----------------PYERFTNSETAEHIAQGLRLY 226
Query: 740 NNVTMLHRFVMVAFWCIQEDPSHRPTMR 767
                  +   + + C  E    RPT +
Sbjct: 227 RPHLASEKVYTIMYSCWHEKADERPTFK 254

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 90/189 (47%), Gaps = 9/189 (4%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           EELG GAFG V++      + N+ A K + +  +  ++  + E+  +    H  LV L  
Sbjct: 163 EELGTGAFGVVHR-VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHD 221
Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
             ++    +++YEFMS G +   +  + +K +     E    +  GL ++HE      +H
Sbjct: 222 AFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE---NNYVH 278
Query: 626 CDIKPQNILLDDHYN--ARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVK 683
            D+KP+NI+     +   ++ DFGL   L   QS   T   GT  + APE     P+   
Sbjct: 279 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT--GTAEFAAPEVAEGKPVGYY 336
Query: 684 VDVYSYGVL 692
            D++S GVL
Sbjct: 337 TDMWSVGVL 345

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 94/195 (48%), Gaps = 14/195 (7%)
Query: 507 EELGRGAFGTV----YKGFVNMGSSNHVAVKKLNSVFQD-SEKEFKAEVNGIGQTHHKNL 561
           EELG G F  V     KG     ++  +  ++L+S  +  S +E + EVN + +  H N+
Sbjct: 18  EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI 77
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           + L    +   + +L+ E +S G +  FL           T+    I  G+ YLH     
Sbjct: 78  ITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH---SK 134
Query: 622 QIIHCDIKPQNILLDDHY--NARIS--DFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
           +I H D+KP+NI+L D    N RI   DFG+A  +       N  I GT  +VAPE    
Sbjct: 135 RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN--IFGTPEFVAPEIVNY 192
Query: 678 MPITVKVDVYSYGVL 692
            P+ ++ D++S GV+
Sbjct: 193 EPLGLEADMWSIGVI 207

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 10/204 (4%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV---FQDSEKEFKAEVNGIGQTHHKNLVR 563
           + LG G FG V  G   + + + VAVK LN       D   + K E+  +    H ++++
Sbjct: 17  DTLGVGTFGKVKIGEHQL-TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           L        +  +V E++S G +  ++    +        +   I   + Y H      +
Sbjct: 76  LYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH---MV 132
Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR-NMPITV 682
           +H D+KP+N+LLD H NA+I+DFGL+ +++ D     T+  G+  Y APE     +    
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRTSC-GSPNYAAPEVISGRLYAGP 190
Query: 683 KVDVYSYGVLLLEIICLRRNIDNE 706
           +VD++S GV+L  ++C     D+E
Sbjct: 191 EVDIWSCGVILYALLCGTLPFDDE 214

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVA--VKKLNSVFQD---SEKEFKAEVNGIGQTHHKNL 561
           EELG G F  V K         + A  +KK  +       S ++ + EV+ + +  H N+
Sbjct: 17  EELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           + L    +   + +L+ E ++ G +  FL        +  TE    I  G++YLH     
Sbjct: 77  ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 622 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
           QI H D+KP+NI+L D        +I DFGLA  +       N  I GT  +VAPE    
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIVNY 191
Query: 678 MPITVKVDVYSYGVL 692
            P+ ++ D++S GV+
Sbjct: 192 EPLGLEADMWSIGVI 206

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 30/269 (11%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           E++G+G+FG V+KG  N  +   VA+K ++    +D  ++ + E+  + Q     + +  
Sbjct: 13  EKIGKGSFGEVFKGIDNR-TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM---GIAGGLFYLHEECCTQ 622
           G   +     ++ E++  G+    L    +P     T+IA     I  GL YLH E   +
Sbjct: 72  GSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSE---K 124
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH DIK  N+LL +H   +++DFG+A  LT  Q   NT + GT  ++APE  +      
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDS 183
Query: 683 KVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV 742
           K D++S G+  +E +       +E+  +    L      +    TLE          N  
Sbjct: 184 KADIWSLGITAIE-LARGEPPHSELHPMKVLFLI----PKNNPPTLEG---------NYS 229
Query: 743 TMLHRFVMVAFWCIQEDPSHRPTMRKVTQ 771
             L  FV     C+ ++PS RPT +++ +
Sbjct: 230 KPLKEFVEA---CLNKEPSFRPTAKELLK 255

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 98/195 (50%), Gaps = 11/195 (5%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           ELG GAFG VYK   N  +S   A K +++  ++  +++  E++ +    H N+V+LL  
Sbjct: 44  ELGDGAFGKVYKA-QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA 102
Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIA-MGIAGGLFYLHEECCTQIIHC 626
                N  ++ EF + G V + +    +P  + + ++        L YLH+    +IIH 
Sbjct: 103 FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD---NKIIHR 159
Query: 627 DIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF-----RNMPIT 681
           D+K  NIL     + +++DFG++   T      +  I GT  ++APE       ++ P  
Sbjct: 160 DLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI-GTPYWMAPEVVMCETSKDRPYD 218
Query: 682 VKVDVYSYGVLLLEI 696
            K DV+S G+ L+E+
Sbjct: 219 YKADVWSLGITLIEM 233

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 11/200 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH---VAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F  +LG+G FG+V     +    N    VAVKKL    ++  ++F+ E+  +    H N+
Sbjct: 17  FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 562 VRLLGYCDEG--QNRLLVYEFMSNGTVASFLFGDSKPNWKLRT-EIAMGIAGGLFYLHEE 618
           V+  G C     +N  L+ EF+  G++  +L    +    ++  +    I  G+ YL   
Sbjct: 77  VKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYL--- 133
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG--YVAPEWFR 676
              + IH D+  +NIL+++    +I DFGL K+L  D+        G     + APE   
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 677 NMPITVKVDVYSYGVLLLEI 696
               +V  DV+S+GV+L E+
Sbjct: 194 ESKFSVASDVWSFGVVLYEL 213

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVA--VKKLNSVFQD---SEKEFKAEVNGIGQTHHKNL 561
           EELG G F  V K         + A  +KK  +       S ++ + EV+ + +  H N+
Sbjct: 16  EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           + L    +   + +L+ E ++ G +  FL        +  TE    I  G++YLH     
Sbjct: 76  ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 132
Query: 622 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
           QI H D+KP+NI+L D        +I DFGLA  +       N  I GT  +VAPE    
Sbjct: 133 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIVNY 190
Query: 678 MPITVKVDVYSYGVL 692
            P+ ++ D++S GV+
Sbjct: 191 EPLGLEADMWSIGVI 205

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 9/189 (4%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           EELG GAFG V++      + N+ A K + +  +  ++  + E+  +    H  LV L  
Sbjct: 57  EELGTGAFGVVHR-VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHD 115
Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
             ++    +++YEFMS G +   +  + +K +     E    +  GL ++HE      +H
Sbjct: 116 AFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE---NNYVH 172
Query: 626 CDIKPQNILLDDHYNARIS--DFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVK 683
            D+KP+NI+     +  +   DFGL   L   QS   T   GT  + APE     P+   
Sbjct: 173 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT--GTAEFAAPEVAEGKPVGYY 230
Query: 684 VDVYSYGVL 692
            D++S GVL
Sbjct: 231 TDMWSVGVL 239

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 25/265 (9%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           F +ELG G FG V  G         VA+K +      SE EF  E   +    H+ LV+L
Sbjct: 12  FLKELGTGQFGVVKYG--KWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQL 68
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYLHEECCTQ 622
            G C + +   ++ E+M+NG + ++L  + +  ++ +   E+   +   + YL  +   Q
Sbjct: 69  YGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESK---Q 124
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            +H D+  +N L++D    ++SDFGL++ +  D+  ++   +    +  PE       + 
Sbjct: 125 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 184
Query: 683 KVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV 742
           K D++++GVL+ EI  L +                  Y+R+        +   L      
Sbjct: 185 KSDIWAFGVLMWEIYSLGKM----------------PYERFTNSETAEHIAQGLRLYRPH 228
Query: 743 TMLHRFVMVAFWCIQEDPSHRPTMR 767
               +   + + C  E    RPT +
Sbjct: 229 LASEKVYTIMYSCWHEKADERPTFK 253

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVA--VKKLNSVFQD---SEKEFKAEVNGIGQTHHKNL 561
           EELG G F  V K         + A  +KK  +       S ++ + EV+ + +  H N+
Sbjct: 17  EELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           + L    +   + +L+ E ++ G +  FL        +  TE    I  G++YLH     
Sbjct: 77  ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 622 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
           QI H D+KP+NI+L D        +I DFGLA  +       N  I GT  +VAPE    
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIVNY 191
Query: 678 MPITVKVDVYSYGVL 692
            P+ ++ D++S GV+
Sbjct: 192 EPLGLEADMWSIGVI 206

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 30/269 (11%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           E++G+G+FG V+KG  N  +   VA+K ++    +D  ++ + E+  + Q     + +  
Sbjct: 33  EKIGKGSFGEVFKGIDNR-TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 91
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM---GIAGGLFYLHEECCTQ 622
           G   +     ++ E++  G+    L    +P     T+IA     I  GL YLH E   +
Sbjct: 92  GSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSE---K 144
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH DIK  N+LL +H   +++DFG+A  LT  Q   NT + GT  ++APE  +      
Sbjct: 145 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDS 203
Query: 683 KVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV 742
           K D++S G+  +E +       +E+  +    L      +    TLE          N  
Sbjct: 204 KADIWSLGITAIE-LARGEPPHSELHPMKVLFLI----PKNNPPTLEG---------NYS 249
Query: 743 TMLHRFVMVAFWCIQEDPSHRPTMRKVTQ 771
             L  FV     C+ ++PS RPT +++ +
Sbjct: 250 KPLKEFVEA---CLNKEPSFRPTAKELLK 275

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVA--VKKLNSVFQD---SEKEFKAEVNGIGQTHHKNL 561
           EELG G F  V K         + A  +KK  +       S ++ + EV+ + +  H N+
Sbjct: 16  EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 75
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           + L    +   + +L+ E ++ G +  FL        +  TE    I  G++YLH     
Sbjct: 76  ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 132
Query: 622 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
           QI H D+KP+NI+L D        +I DFGLA  +       N  I GT  +VAPE    
Sbjct: 133 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIVNY 190
Query: 678 MPITVKVDVYSYGVL 692
            P+ ++ D++S GV+
Sbjct: 191 EPLGLEADMWSIGVI 205

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVA--VKKLNSVFQD---SEKEFKAEVNGIGQTHHKNL 561
           EELG G F  V K         + A  +KK  +       S ++ + EV+ + +  H N+
Sbjct: 17  EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           + L    +   + +L+ E ++ G +  FL        +  TE    I  G++YLH     
Sbjct: 77  ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 622 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
           QI H D+KP+NI+L D        +I DFGLA  +       N  I GT  +VAPE    
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIVNY 191
Query: 678 MPITVKVDVYSYGVL 692
            P+ ++ D++S GV+
Sbjct: 192 EPLGLEADMWSIGVI 206

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVA--VKKLNSVFQD---SEKEFKAEVNGIGQTHHKNL 561
           EELG G F  V K         + A  +KK  +       S ++ + EV+ + +  H N+
Sbjct: 17  EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           + L    +   + +L+ E ++ G +  FL        +  TE    I  G++YLH     
Sbjct: 77  ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 622 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
           QI H D+KP+NI+L D        +I DFGLA  +       N  I GT  +VAPE    
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIVNY 191
Query: 678 MPITVKVDVYSYGVL 692
            P+ ++ D++S GV+
Sbjct: 192 EPLGLEADMWSIGVI 206

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVA--VKKLNSVFQD---SEKEFKAEVNGIGQTHHKNL 561
           EELG G F  V K         + A  +KK  +       S ++ + EV+ + +  H N+
Sbjct: 17  EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           + L    +   + +L+ E ++ G +  FL        +  TE    I  G++YLH     
Sbjct: 77  ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 622 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
           QI H D+KP+NI+L D        +I DFGLA  +       N  I GT  +VAPE    
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIVNY 191
Query: 678 MPITVKVDVYSYGVL 692
            P+ ++ D++S GV+
Sbjct: 192 EPLGLEADMWSIGVI 206

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVA--VKKLNSVFQD---SEKEFKAEVNGIGQTHHKNL 561
           EELG G F  V K         + A  +KK  +       S ++ + EV+ + +  H N+
Sbjct: 17  EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           + L    +   + +L+ E ++ G +  FL        +  TE    I  G++YLH     
Sbjct: 77  ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 622 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
           QI H D+KP+NI+L D        +I DFGLA  +       N  I GT  +VAPE    
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIVNY 191
Query: 678 MPITVKVDVYSYGVL 692
            P+ ++ D++S GV+
Sbjct: 192 EPLGLEADMWSIGVI 206

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVA--VKKLNSVFQD---SEKEFKAEVNGIGQTHHKNL 561
           EELG G F  V K         + A  +KK  +       S ++ + EV+ + +  H N+
Sbjct: 17  EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           + L    +   + +L+ E ++ G +  FL        +  TE    I  G++YLH     
Sbjct: 77  ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 622 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
           QI H D+KP+NI+L D        +I DFGLA  +       N  I GT  +VAPE    
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIVNY 191
Query: 678 MPITVKVDVYSYGVL 692
            P+ ++ D++S GV+
Sbjct: 192 EPLGLEADMWSIGVI 206

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVA--VKKLNSVFQD---SEKEFKAEVNGIGQTHHKNL 561
           EELG G F  V K         + A  +KK  +       S ++ + EV+ + +  H N+
Sbjct: 17  EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           + L    +   + +L+ E ++ G +  FL        +  TE    I  G++YLH     
Sbjct: 77  ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 622 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
           QI H D+KP+NI+L D        +I DFGLA  +       N  I GT  +VAPE    
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIVNY 191
Query: 678 MPITVKVDVYSYGVL 692
            P+ ++ D++S GV+
Sbjct: 192 EPLGLEADMWSIGVI 206

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 107/228 (46%), Gaps = 41/228 (17%)
Query: 509 LGRGAFGTVYKG--FVNMGSSNH--VAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKNLVR 563
           LG G FG V K   F   G + +  VAVK L      SE ++  +E N + Q +H ++++
Sbjct: 31  LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSK-------------------PNWKLRT-- 602
           L G C +    LL+ E+   G++  FL    K                   P+ +  T  
Sbjct: 91  LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 603 ---EIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT 659
                A  I+ G+ YL E    +++H D+  +NIL+ +    +ISDFGL++    D    
Sbjct: 151 DLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSR----DVYEE 203
Query: 660 NTAIRGTKGYVAPEWFR-----NMPITVKVDVYSYGVLLLEIICLRRN 702
           ++ ++ ++G +  +W       +   T + DV+S+GVLL EI+ L  N
Sbjct: 204 DSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN 251

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 25/265 (9%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           F +ELG G FG V  G         VA+K +      SE EF  E   +    H+ LV+L
Sbjct: 19  FLKELGTGQFGVVKYG--KWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQL 75
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYLHEECCTQ 622
            G C + +   ++ E+M+NG + ++L  + +  ++ +   E+   +   + YL  +   Q
Sbjct: 76  YGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESK---Q 131
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            +H D+  +N L++D    ++SDFGL++ +  D+  ++   +    +  PE       + 
Sbjct: 132 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 191
Query: 683 KVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV 742
           K D++++GVL+ EI  L +                  Y+R+        +   L      
Sbjct: 192 KSDIWAFGVLMWEIYSLGKM----------------PYERFTNSETAEHIAQGLRLYRPH 235
Query: 743 TMLHRFVMVAFWCIQEDPSHRPTMR 767
               +   + + C  E    RPT +
Sbjct: 236 LASEKVYTIMYSCWHEKADERPTFK 260

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH---VAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F ++LG+G FG+V     +    N    VAVKKL    ++  ++F+ E+  +    H N+
Sbjct: 17  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 562 VRLLGYCDEG--QNRLLVYEFMSNGTVASFLFGDSKPNWKLRT-EIAMGIAGGLFYLHEE 618
           V+  G C     +N  L+ E++  G++  +L    +    ++  +    I  G+ YL   
Sbjct: 77  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--- 133
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG--YVAPEWFR 676
              + IH D+  +NIL+++    +I DFGL K+L  D+        G     + APE   
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 677 NMPITVKVDVYSYGVLLLEI 696
               +V  DV+S+GV+L E+
Sbjct: 194 ESKFSVASDVWSFGVVLYEL 213

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 13/201 (6%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH---VAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F ++LG+G FG+V     +    N    VAVKKL    ++  ++F+ E+  +    H N+
Sbjct: 13  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 72
Query: 562 VRLLGYCDEG--QNRLLVYEFMSNGTVASFL--FGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+  G C     +N  L+ E++  G++  +L    +   + KL  +    I  G+ YL  
Sbjct: 73  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYL-- 129
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG--YVAPEWF 675
               + IH D+  +NIL+++    +I DFGL K+L  D+        G     + APE  
Sbjct: 130 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 188
Query: 676 RNMPITVKVDVYSYGVLLLEI 696
                +V  DV+S+GV+L E+
Sbjct: 189 TESKFSVASDVWSFGVVLYEL 209

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH---VAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F ++LG+G FG+V     +    N    VAVKKL    ++  ++F+ E+  +    H N+
Sbjct: 18  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 77
Query: 562 VRLLGYCDEG--QNRLLVYEFMSNGTVASFLFGDSKPNWKLRT-EIAMGIAGGLFYLHEE 618
           V+  G C     +N  L+ E++  G++  +L    +    ++  +    I  G+ YL   
Sbjct: 78  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--- 134
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG--YVAPEWFR 676
              + IH D+  +NIL+++    +I DFGL K+L  D+        G     + APE   
Sbjct: 135 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 194
Query: 677 NMPITVKVDVYSYGVLLLEI 696
               +V  DV+S+GV+L E+
Sbjct: 195 ESKFSVASDVWSFGVVLYEL 214

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 103/237 (43%), Gaps = 32/237 (13%)
Query: 509 LGRGAFGTVYK------GFVNMGSSNHVAVKKLNSVFQDS--EKEFKAEVNGIGQTHHKN 560
           LGRG FG V+       G +      +    K    +Q +  EK+  A+V       H  
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HSR 245
Query: 561 LVRLLGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAM----GIAGGLFYL 615
            +  L Y  E +  L LV   M+ G +   ++   + N   +   A+     I  GL +L
Sbjct: 246 FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHL 305
Query: 616 HEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF 675
           H+     II+ D+KP+N+LLDD  N RISD GLA  L   Q+ T     GT G++APE  
Sbjct: 306 HQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK-GYAGTPGFMAPELL 361
Query: 676 RNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALV 732
                   VD ++ GV L E+I  R        KV+   L        ++R LE  V
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL--------KQRVLEQAV 410

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 99/204 (48%), Gaps = 10/204 (4%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV---FQDSEKEFKAEVNGIGQTHHKNLVR 563
           + LG G FG V  G   + + + VAVK LN       D   + K E+  +    H ++++
Sbjct: 17  DTLGVGTFGKVKIGEHQL-TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           L        +  +V E++S G +  ++    +        +   I   + Y H      +
Sbjct: 76  LYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH---MV 132
Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR-NMPITV 682
           +H D+KP+N+LLD H NA+I+DFGL+ +++  +   ++   G+  Y APE     +    
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC--GSPNYAAPEVISGRLYAGP 190
Query: 683 KVDVYSYGVLLLEIICLRRNIDNE 706
           +VD++S GV+L  ++C     D+E
Sbjct: 191 EVDIWSCGVILYALLCGTLPFDDE 214

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH---VAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F ++LG+G FG+V     +    N    VAVKKL    ++  ++F+ E+  +    H N+
Sbjct: 12  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 71
Query: 562 VRLLGYCDEG--QNRLLVYEFMSNGTVASFLFGDSKPNWKLRT-EIAMGIAGGLFYLHEE 618
           V+  G C     +N  L+ E++  G++  +L    +    ++  +    I  G+ YL   
Sbjct: 72  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--- 128
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG--YVAPEWFR 676
              + IH D+  +NIL+++    +I DFGL K+L  D+        G     + APE   
Sbjct: 129 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 188
Query: 677 NMPITVKVDVYSYGVLLLEI 696
               +V  DV+S+GV+L E+
Sbjct: 189 ESKFSVASDVWSFGVVLYEL 208

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH---VAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F ++LG+G FG+V     +    N    VAVKKL    ++  ++F+ E+  +    H N+
Sbjct: 19  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 78
Query: 562 VRLLGYCDEG--QNRLLVYEFMSNGTVASFLFGDSKPNWKLRT-EIAMGIAGGLFYLHEE 618
           V+  G C     +N  L+ E++  G++  +L    +    ++  +    I  G+ YL   
Sbjct: 79  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--- 135
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG--YVAPEWFR 676
              + IH D+  +NIL+++    +I DFGL K+L  D+        G     + APE   
Sbjct: 136 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 195
Query: 677 NMPITVKVDVYSYGVLLLEI 696
               +V  DV+S+GV+L E+
Sbjct: 196 ESKFSVASDVWSFGVVLYEL 215

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 25/265 (9%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           F +ELG G FG V  G         VA+K +      SE EF  E   +    H+ LV+L
Sbjct: 13  FLKELGTGQFGVVKYG--KWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQL 69
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYLHEECCTQ 622
            G C + +   ++ E+M+NG + ++L  + +  ++ +   E+   +   + YL  +   Q
Sbjct: 70  YGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESK---Q 125
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            +H D+  +N L++D    ++SDFGL++ +  D+  ++   +    +  PE       + 
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 185
Query: 683 KVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV 742
           K D++++GVL+ EI  L +                  Y+R+        +   L      
Sbjct: 186 KSDIWAFGVLMWEIYSLGKM----------------PYERFTNSETAEHIAQGLRLYRPH 229
Query: 743 TMLHRFVMVAFWCIQEDPSHRPTMR 767
               +   + + C  E    RPT +
Sbjct: 230 LASEKVYTIMYSCWHEKADERPTFK 254

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 98/197 (49%), Gaps = 9/197 (4%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           F +ELG G FG V  G         VA+K +      SE EF  E   +    H+ LV+L
Sbjct: 8   FLKELGTGQFGVVKYG--KWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQL 64
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYLHEECCTQ 622
            G C + +   ++ E+M+NG + ++L  + +  ++ +   E+   +   + YL  +   Q
Sbjct: 65  YGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESK---Q 120
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            +H D+  +N L++D    ++SDFGL++ +  D+  ++   +    +  PE       + 
Sbjct: 121 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 180
Query: 683 KVDVYSYGVLLLEIICL 699
           K D++++GVL+ EI  L
Sbjct: 181 KSDIWAFGVLMWEIYSL 197

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH---VAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F ++LG+G FG+V     +    N    VAVKKL    ++  ++F+ E+  +    H N+
Sbjct: 45  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 104
Query: 562 VRLLGYCDEG--QNRLLVYEFMSNGTVASFLFGDSKPNWKLRT-EIAMGIAGGLFYLHEE 618
           V+  G C     +N  L+ E++  G++  +L    +    ++  +    I  G+ YL   
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--- 161
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG--YVAPEWFR 676
              + IH D+  +NIL+++    +I DFGL K+L  D+        G     + APE   
Sbjct: 162 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 221
Query: 677 NMPITVKVDVYSYGVLLLEI 696
               +V  DV+S+GV+L E+
Sbjct: 222 ESKFSVASDVWSFGVVLYEL 241

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH---VAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F ++LG+G FG+V     +    N    VAVKKL    ++  ++F+ E+  +    H N+
Sbjct: 14  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 562 VRLLGYCDEG--QNRLLVYEFMSNGTVASFLFGDSKPNWKLRT-EIAMGIAGGLFYLHEE 618
           V+  G C     +N  L+ E++  G++  +L    +    ++  +    I  G+ YL   
Sbjct: 74  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--- 130
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG--YVAPEWFR 676
              + IH D+  +NIL+++    +I DFGL K+L  D+        G     + APE   
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 677 NMPITVKVDVYSYGVLLLEI 696
               +V  DV+S+GV+L E+
Sbjct: 191 ESKFSVASDVWSFGVVLYEL 210

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH---VAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F ++LG+G FG+V     +    N    VAVKKL    ++  ++F+ E+  +    H N+
Sbjct: 21  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 80
Query: 562 VRLLGYCDEG--QNRLLVYEFMSNGTVASFLFGDSKPNWKLRT-EIAMGIAGGLFYLHEE 618
           V+  G C     +N  L+ E++  G++  +L    +    ++  +    I  G+ YL   
Sbjct: 81  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--- 137
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG--YVAPEWFR 676
              + IH D+  +NIL+++    +I DFGL K+L  D+        G     + APE   
Sbjct: 138 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 197
Query: 677 NMPITVKVDVYSYGVLLLEII 697
               +V  DV+S+GV+L E+ 
Sbjct: 198 ESKFSVASDVWSFGVVLYELF 218

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 103/237 (43%), Gaps = 32/237 (13%)
Query: 509 LGRGAFGTVYK------GFVNMGSSNHVAVKKLNSVFQDS--EKEFKAEVNGIGQTHHKN 560
           LGRG FG V+       G +      +    K    +Q +  EK+  A+V       H  
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HSR 245
Query: 561 LVRLLGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAM----GIAGGLFYL 615
            +  L Y  E +  L LV   M+ G +   ++   + N   +   A+     I  GL +L
Sbjct: 246 FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHL 305
Query: 616 HEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF 675
           H+     II+ D+KP+N+LLDD  N RISD GLA  L   Q+ T     GT G++APE  
Sbjct: 306 HQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK-GYAGTPGFMAPELL 361
Query: 676 RNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALV 732
                   VD ++ GV L E+I  R        KV+   L        ++R LE  V
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL--------KQRVLEQAV 410

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 86/196 (43%), Gaps = 16/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS------EKEFKAEVNGIGQTHHKNLV 562
           LG+G FG VY         N   +  L  +F+        E + + EV       H N++
Sbjct: 16  LGKGKFGNVYLA----REKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 71
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           RL GY  +     L+ E+   GTV   L   SK + +        +A  L Y H +   +
Sbjct: 72  RLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---K 128
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +IH DIKP+N+LL      +I+DFG +       S    A+ GT  Y+ PE         
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRMHDE 185
Query: 683 KVDVYSYGVLLLEIIC 698
           KVD++S GVL  E + 
Sbjct: 186 KVDLWSLGVLCYEFLV 201

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 11/201 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH---VAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           +  +LG+G FG+V     +    N    VAVK+L     D +++F+ E+  +   H   +
Sbjct: 14  YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 73
Query: 562 VRLLG--YCDEGQNRLLVYEFMSNGTVASFL-FGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
           V+  G  Y    Q+  LV E++ +G +  FL    ++ +       +  I  G+ YL   
Sbjct: 74  VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR 133
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG--YVAPEWFR 676
            C   +H D+  +NIL++   + +I+DFGLAKLL LD+ +      G     + APE   
Sbjct: 134 RC---VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS 190
Query: 677 NMPITVKVDVYSYGVLLLEII 697
           +   + + DV+S+GV+L E+ 
Sbjct: 191 DNIFSRQSDVWSFGVVLYELF 211

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH---VAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F ++LG+G FG+V     +    N    VAVKKL    ++  ++F+ E+  +    H N+
Sbjct: 14  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 562 VRLLGYCDEG--QNRLLVYEFMSNGTVASFLFGDSKPNWKLRT-EIAMGIAGGLFYLHEE 618
           V+  G C     +N  L+ E++  G++  +L    +    ++  +    I  G+ YL   
Sbjct: 74  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--- 130
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG--YVAPEWFR 676
              + IH D+  +NIL+++    +I DFGL K+L  D+        G     + APE   
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 677 NMPITVKVDVYSYGVLLLEI 696
               +V  DV+S+GV+L E+
Sbjct: 191 ESKFSVASDVWSFGVVLYEL 210

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH---VAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F ++LG+G FG+V     +    N    VAVKKL    ++  ++F+ E+  +    H N+
Sbjct: 20  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 79
Query: 562 VRLLGYCDEG--QNRLLVYEFMSNGTVASFLFGDSKPNWKLRT-EIAMGIAGGLFYLHEE 618
           V+  G C     +N  L+ E++  G++  +L    +    ++  +    I  G+ YL   
Sbjct: 80  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--- 136
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG--YVAPEWFR 676
              + IH D+  +NIL+++    +I DFGL K+L  D+        G     + APE   
Sbjct: 137 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 196
Query: 677 NMPITVKVDVYSYGVLLLEI 696
               +V  DV+S+GV+L E+
Sbjct: 197 ESKFSVASDVWSFGVVLYEL 216

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 103/237 (43%), Gaps = 32/237 (13%)
Query: 509 LGRGAFGTVYK------GFVNMGSSNHVAVKKLNSVFQDS--EKEFKAEVNGIGQTHHKN 560
           LGRG FG V+       G +      +    K    +Q +  EK+  A+V       H  
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HSR 245
Query: 561 LVRLLGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAM----GIAGGLFYL 615
            +  L Y  E +  L LV   M+ G +   ++   + N   +   A+     I  GL +L
Sbjct: 246 FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHL 305
Query: 616 HEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF 675
           H+     II+ D+KP+N+LLDD  N RISD GLA  L   Q+ T     GT G++APE  
Sbjct: 306 HQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK-GYAGTPGFMAPELL 361
Query: 676 RNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALV 732
                   VD ++ GV L E+I  R        KV+   L        ++R LE  V
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL--------KQRVLEQAV 410

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 107/228 (46%), Gaps = 41/228 (17%)
Query: 509 LGRGAFGTVYKG--FVNMGSSNH--VAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKNLVR 563
           LG G FG V K   F   G + +  VAVK L      SE ++  +E N + Q +H ++++
Sbjct: 31  LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSK-------------------PNWKLRT-- 602
           L G C +    LL+ E+   G++  FL    K                   P+ +  T  
Sbjct: 91  LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 603 ---EIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT 659
                A  I+ G+ YL E    +++H D+  +NIL+ +    +ISDFGL++    D    
Sbjct: 151 DLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSR----DVYEE 203
Query: 660 NTAIRGTKGYVAPEWFR-----NMPITVKVDVYSYGVLLLEIICLRRN 702
           ++ ++ ++G +  +W       +   T + DV+S+GVLL EI+ L  N
Sbjct: 204 DSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN 251

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 87/193 (45%), Gaps = 10/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG VY       S   +A+K L     +    E + + EV       H N++RL 
Sbjct: 17  LGKGKFGNVYLA-REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 75
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           GY  +     L+ E+   GTV   L   SK + +        +A  L Y H +   ++IH
Sbjct: 76  GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 132
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            DIKP+N+LL      +I+DFG +       S   T + GT  Y+ PE         KVD
Sbjct: 133 RDIKPENLLLGSAGELKIADFGWS---CHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVD 189
Query: 686 VYSYGVLLLEIIC 698
           ++S GVL  E + 
Sbjct: 190 LWSLGVLCYEFLV 202

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 114/266 (42%), Gaps = 28/266 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG VY       S   +A+K L     +    E + + EV       H N++RL 
Sbjct: 42  LGKGKFGNVYLA-REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 100
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           GY  +     L+ E+   GTV   L   SK + +        +A  L Y H     ++IH
Sbjct: 101 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIH 157
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            DIKP+N+LL      +I+DFG +       S   T + GT  Y+ PE         KVD
Sbjct: 158 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 214
Query: 686 VYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTML 745
           ++S GVL  E +  +                 +  + YQE T + +   +    + VT  
Sbjct: 215 LWSLGVLCYEFLVGK---------------PPFEANTYQE-TYKRISRVEFTFPDFVTEG 258
Query: 746 HRFVMVAFWCIQEDPSHRPTMRKVTQ 771
            R ++     ++ +PS RP +R+V +
Sbjct: 259 ARDLISRL--LKHNPSQRPMLREVLE 282

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 103/237 (43%), Gaps = 32/237 (13%)
Query: 509 LGRGAFGTVYK------GFVNMGSSNHVAVKKLNSVFQDS--EKEFKAEVNGIGQTHHKN 560
           LGRG FG V+       G +      +    K    +Q +  EK+  A+V       H  
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HSR 245
Query: 561 LVRLLGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAM----GIAGGLFYL 615
            +  L Y  E +  L LV   M+ G +   ++   + N   +   A+     I  GL +L
Sbjct: 246 FIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHL 305
Query: 616 HEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF 675
           H+     II+ D+KP+N+LLDD  N RISD GLA  L   Q+ T     GT G++APE  
Sbjct: 306 HQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK-GYAGTPGFMAPELL 361
Query: 676 RNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALV 732
                   VD ++ GV L E+I  R        KV+   L        ++R LE  V
Sbjct: 362 LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL--------KQRVLEQAV 410

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 106/228 (46%), Gaps = 41/228 (17%)
Query: 509 LGRGAFGTVYKG--FVNMGSSNH--VAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKNLVR 563
           LG G FG V K   F   G + +  VAVK L      SE ++  +E N + Q +H ++++
Sbjct: 31  LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSK-------------------PNWKLRT-- 602
           L G C +    LL+ E+   G++  FL    K                   P+ +  T  
Sbjct: 91  LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 603 ---EIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT 659
                A  I+ G+ YL E     ++H D+  +NIL+ +    +ISDFGL++    D    
Sbjct: 151 DLISFAWQISQGMQYLAE---MSLVHRDLAARNILVAEGRKMKISDFGLSR----DVYEE 203
Query: 660 NTAIRGTKGYVAPEWFR-----NMPITVKVDVYSYGVLLLEIICLRRN 702
           ++ ++ ++G +  +W       +   T + DV+S+GVLL EI+ L  N
Sbjct: 204 DSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN 251

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVA--VKKLNSVFQD---SEKEFKAEVNGIGQTHHKNL 561
           EELG G F  V K         + A  +KK  +       S ++ + EV+ + +  H N+
Sbjct: 17  EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           + L    +   + +L+ E ++ G +  FL        +  TE    I  G++YLH     
Sbjct: 77  ITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 622 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
           QI H D+KP+NI+L D        +I DFGLA  +       N  I GT  +VAPE    
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIVNY 191
Query: 678 MPITVKVDVYSYGVL 692
            P+ ++ D++S GV+
Sbjct: 192 EPLGLEADMWSIGVI 206

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 11/201 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH---VAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           +  +LG+G FG+V     +    N    VAVK+L     D +++F+ E+  +   H   +
Sbjct: 15  YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 74
Query: 562 VRLLG--YCDEGQNRLLVYEFMSNGTVASFL-FGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
           V+  G  Y    Q+  LV E++ +G +  FL    ++ +       +  I  G+ YL   
Sbjct: 75  VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR 134
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG--YVAPEWFR 676
            C   +H D+  +NIL++   + +I+DFGLAKLL LD+ +      G     + APE   
Sbjct: 135 RC---VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS 191
Query: 677 NMPITVKVDVYSYGVLLLEII 697
           +   + + DV+S+GV+L E+ 
Sbjct: 192 DNIFSRQSDVWSFGVVLYELF 212

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 86/193 (44%), Gaps = 10/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG VY       S   +A+K L     +    E + + EV       H N++RL 
Sbjct: 33  LGKGKFGNVYLA-REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 91
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           GY  +     L+ E+   GTV   L   SK + +        +A  L Y H     ++IH
Sbjct: 92  GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIH 148
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            DIKP+N+LL      +I+DFG +       S   T + GT  Y+ PE         KVD
Sbjct: 149 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 205
Query: 686 VYSYGVLLLEIIC 698
           ++S GVL  E + 
Sbjct: 206 LWSLGVLCYEFLV 218

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 87/193 (45%), Gaps = 10/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG VY       S   +A+K L     +    E + + EV       H N++RL 
Sbjct: 19  LGKGKFGNVYLA-REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           GY  +     L+ E+   GTV   L   SK + +        +A  L Y H +   ++IH
Sbjct: 78  GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 134
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            DIKP+N+LL      +I+DFG +       S   T + GT  Y+ PE         KVD
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 191
Query: 686 VYSYGVLLLEIIC 698
           ++S GVL  E + 
Sbjct: 192 LWSLGVLCYEFLV 204

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 95/207 (45%), Gaps = 21/207 (10%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE-FKAEVNGIGQTHHKNLVR 563
            KE LG G FG V + +++  +   VA+K+         +E +  E+  + + +H N+V 
Sbjct: 18  MKERLGTGGFGYVLR-WIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 76
Query: 564 LLGYCDEGQN------RLLVYEFMSNGTVASFL--FGD--SKPNWKLRTEIAMGIAGGLF 613
                D  Q        LL  E+   G +  +L  F +        +RT ++  I+  L 
Sbjct: 77  AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DISSALR 135
Query: 614 YLHEECCTQIIHCDIKPQNILLD---DHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV 670
           YLHE    +IIH D+KP+NI+L         +I D G AK   LDQ    T   GT  Y+
Sbjct: 136 YLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTEFVGTLQYL 190
Query: 671 APEWFRNMPITVKVDVYSYGVLLLEII 697
           APE       TV VD +S+G L  E I
Sbjct: 191 APELLEQKKYTVTVDYWSFGTLAFECI 217

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 87/193 (45%), Gaps = 10/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG VY       S   +A+K L     +    E + + EV       H N++RL 
Sbjct: 21  LGKGKFGNVYLA-REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           GY  +     L+ E+   GTV   L   SK + +        +A  L Y H +   ++IH
Sbjct: 80  GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 136
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            DIKP+N+LL      +I+DFG +       S   T + GT  Y+ PE         KVD
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 193
Query: 686 VYSYGVLLLEIIC 698
           ++S GVL  E + 
Sbjct: 194 LWSLGVLCYEFLV 206

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH---VAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F ++LG+G FG+V     +    N    VAVKKL    ++  ++F+ E+  +    H N+
Sbjct: 32  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 562 VRLLGYCDEG--QNRLLVYEFMSNGTVASFLFGDSKPNWKLRT-EIAMGIAGGLFYLHEE 618
           V+  G C     +N  L+ E++  G++  +L    +    ++  +    I  G+ YL   
Sbjct: 92  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--- 148
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG--YVAPEWFR 676
              + IH D+  +NIL+++    +I DFGL K+L  D+        G     + APE   
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 677 NMPITVKVDVYSYGVLLLEI 696
               +V  DV+S+GV+L E+
Sbjct: 209 ESKFSVASDVWSFGVVLYEL 228

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 11/200 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH---VAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F ++LG+G FG+V     +    N    VAVKKL    ++  ++F+ E+  +    H N+
Sbjct: 32  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 562 VRLLGYCDEG--QNRLLVYEFMSNGTVASFLFGDSKPNWKLRT-EIAMGIAGGLFYLHEE 618
           V+  G C     +N  L+ E++  G++  +L    +    ++  +    I  G+ YL   
Sbjct: 92  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--- 148
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG--YVAPEWFR 676
              + IH D+  +NIL+++    +I DFGL K+L  D+        G     + APE   
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 677 NMPITVKVDVYSYGVLLLEI 696
               +V  DV+S+GV+L E+
Sbjct: 209 ESKFSVASDVWSFGVVLYEL 228

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 11/201 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH---VAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           +  +LG+G FG+V     +    N    VAVK+L     D +++F+ E+  +   H   +
Sbjct: 27  YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 86
Query: 562 VRLLG--YCDEGQNRLLVYEFMSNGTVASFL-FGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
           V+  G  Y    Q+  LV E++ +G +  FL    ++ +       +  I  G+ YL   
Sbjct: 87  VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR 146
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG--YVAPEWFR 676
            C   +H D+  +NIL++   + +I+DFGLAKLL LD+ +      G     + APE   
Sbjct: 147 RC---VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS 203
Query: 677 NMPITVKVDVYSYGVLLLEII 697
           +   + + DV+S+GV+L E+ 
Sbjct: 204 DNIFSRQSDVWSFGVVLYELF 224

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVA--VKKLNSVFQD---SEKEFKAEVNGIGQTHHKNL 561
           EELG G F  V K         + A  +KK  +       S ++ + EV+ + +  H N+
Sbjct: 17  EELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNV 76
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           + L    +   + +L+ E ++ G +  FL        +  TE    I  G++YLH     
Sbjct: 77  ITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SL 133
Query: 622 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
           QI H D+KP+NI+L D        +I DFGLA  +       N  I GT  +VAPE    
Sbjct: 134 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--IFGTPEFVAPEIVNY 191
Query: 678 MPITVKVDVYSYGVL 692
            P+ ++ D++S GV+
Sbjct: 192 EPLGLEADMWSIGVI 206

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 115/266 (43%), Gaps = 28/266 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG VY       S   +A+K L     +    E + + EV       H N++RL 
Sbjct: 21  LGKGKFGNVYLA-REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           GY  +     L+ E+   GTV   L   SK + +        +A  L Y H +   ++IH
Sbjct: 80  GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 136
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            DIKP+N+LL      +I+DFG +       S   T + GT  Y+ PE         KVD
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVD 193
Query: 686 VYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTML 745
           ++S GVL  E +  +   +                + YQE T + +   +    + VT  
Sbjct: 194 LWSLGVLCYEFLVGKPPFEA---------------NTYQE-TYKRISRVEFTFPDFVTEG 237
Query: 746 HRFVMVAFWCIQEDPSHRPTMRKVTQ 771
            R ++     ++ +PS RP +R+V +
Sbjct: 238 ARDLISRL--LKHNPSQRPXLREVLE 261

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 95/207 (45%), Gaps = 21/207 (10%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE-FKAEVNGIGQTHHKNLVR 563
            KE LG G FG V + +++  +   VA+K+         +E +  E+  + + +H N+V 
Sbjct: 19  MKERLGTGGFGYVLR-WIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 77
Query: 564 LLGYCDEGQN------RLLVYEFMSNGTVASFL--FGD--SKPNWKLRTEIAMGIAGGLF 613
                D  Q        LL  E+   G +  +L  F +        +RT ++  I+  L 
Sbjct: 78  AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DISSALR 136
Query: 614 YLHEECCTQIIHCDIKPQNILLD---DHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV 670
           YLHE    +IIH D+KP+NI+L         +I D G AK   LDQ    T   GT  Y+
Sbjct: 137 YLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTEFVGTLQYL 191
Query: 671 APEWFRNMPITVKVDVYSYGVLLLEII 697
           APE       TV VD +S+G L  E I
Sbjct: 192 APELLEQKKYTVTVDYWSFGTLAFECI 218

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 131/303 (43%), Gaps = 58/303 (19%)
Query: 509 LGRGAFGTVYK----GFVNMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQT-HHKNLV 562
           LGRGAFG V +    G     +   VAVK L      SE +   +E+  +    HH N+V
Sbjct: 35  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 563 RLLGYCDE-GQNRLLVYEFMSNGTVASFLFGDSKPN----WKLRTE-------------- 603
            LLG C + G   +++ EF   G ++++L   SK N    +K+  E              
Sbjct: 95  NLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 604 IAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA- 662
            +  +A G+ +L    C   IH D+  +NILL +    +I DFGLA+ +  D  +     
Sbjct: 153 YSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 209
Query: 663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRN------IDNEISKVDKAILT 716
            R    ++APE   +   T++ DV+S+GVLL EI  L  +      ID E  +       
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR------- 262
Query: 717 DWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV 776
                R +E T     +     M   TML         C   +PS RPT  ++ + L  +
Sbjct: 263 -----RLKEGTRMRAPDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVEHLGNL 308
Query: 777 VEV 779
           ++ 
Sbjct: 309 LQA 311

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 87/193 (45%), Gaps = 10/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG VY       S   +A+K L     +    E + + EV       H N++RL 
Sbjct: 15  LGKGKFGNVYLA-REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 73
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           GY  +     L+ E+   GTV   L   SK + +        +A  L Y H +   ++IH
Sbjct: 74  GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 130
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            DIKP+N+LL      +I+DFG +       S   T + GT  Y+ PE         KVD
Sbjct: 131 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 187
Query: 686 VYSYGVLLLEIIC 698
           ++S GVL  E + 
Sbjct: 188 LWSLGVLCYEFLV 200

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 131/303 (43%), Gaps = 58/303 (19%)
Query: 509 LGRGAFGTVYK----GFVNMGSSNHVAVKKLNSVFQDSE-KEFKAEVN-GIGQTHHKNLV 562
           LGRGAFG V +    G     +   VAVK L      SE +   +E+   I   HH N+V
Sbjct: 26  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 563 RLLGYCDE-GQNRLLVYEFMSNGTVASFLFGDSKPN----WKLRTE-------------- 603
            LLG C + G   +++ EF   G ++++L   SK N    +K+  E              
Sbjct: 86  NLLGACTKPGGPLMVITEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 604 IAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA- 662
            +  +A G+ +L    C   IH D+  +NILL +    +I DFGLA+ +  D  +     
Sbjct: 144 YSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRN------IDNEISKVDKAILT 716
            R    ++APE   +   T++ DV+S+GVLL EI  L  +      ID E  +       
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR------- 253
Query: 717 DWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV 776
                R +E T     +     M   TML         C   +PS RPT  ++ + L  +
Sbjct: 254 -----RLKEGTRMRAPDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVEHLGNL 299
Query: 777 VEV 779
           ++ 
Sbjct: 300 LQA 302

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 73.9 bits (180), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 103/231 (44%), Gaps = 16/231 (6%)
Query: 472 RKKFMRPHQEDQGVSYMNLRCFTYKELVEVTRG-------FKEELGRGAFGTVYKGFVNM 524
           R K+  P   D    Y ++      + VEV +G         EELG GAFG V++  V  
Sbjct: 15  RGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRC-VEK 73
Query: 525 GSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNG 584
            +      K +N+ +   +   K E++ + Q HH  L+ L    ++    +L+ EF+S G
Sbjct: 74  ATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGG 133
Query: 585 TVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY--NA 641
            +   +   D K +             GL ++HE     I+H DIKP+NI+ +     + 
Sbjct: 134 ELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSV 190
Query: 642 RISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVL 692
           +I DFGLA  L  D+    T    T  + APE     P+    D+++ GVL
Sbjct: 191 KIIDFGLATKLNPDEIVKVTT--ATAEFAAPEIVDREPVGFYTDMWAIGVL 239

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 73.9 bits (180), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 87/193 (45%), Gaps = 10/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG VY       S   +A+K L     +    E + + EV       H N++RL 
Sbjct: 16  LGKGKFGNVYLA-REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           GY  +     L+ E+   GTV   L   SK + +        +A  L Y H +   ++IH
Sbjct: 75  GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 131
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            DIKP+N+LL      +I+DFG +       S   T + GT  Y+ PE         KVD
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 686 VYSYGVLLLEIIC 698
           ++S GVL  E + 
Sbjct: 189 LWSLGVLCYEFLV 201

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 131/303 (43%), Gaps = 58/303 (19%)
Query: 509 LGRGAFGTVYK----GFVNMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQT-HHKNLV 562
           LGRGAFG V +    G     +   VAVK L      SE +   +E+  +    HH N+V
Sbjct: 72  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 563 RLLGYCDE-GQNRLLVYEFMSNGTVASFLFGDSKPN----WKLRTE-------------- 603
            LLG C + G   +++ EF   G ++++L   SK N    +K+  E              
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDFLTLEHLIC 189
Query: 604 IAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA- 662
            +  +A G+ +L    C   IH D+  +NILL +    +I DFGLA+ +  D  +     
Sbjct: 190 YSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 246
Query: 663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRN------IDNEISKVDKAILT 716
            R    ++APE   +   T++ DV+S+GVLL EI  L  +      ID E  +       
Sbjct: 247 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR------- 299
Query: 717 DWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV 776
                R +E T     +     M   TML         C   +PS RPT  ++ + L  +
Sbjct: 300 -----RLKEGTRMRAPDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVEHLGNL 345
Query: 777 VEV 779
           ++ 
Sbjct: 346 LQA 348

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 87/193 (45%), Gaps = 10/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG VY       S   +A+K L     +    E + + EV       H N++RL 
Sbjct: 16  LGKGKFGNVYLA-REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           GY  +     L+ E+   GTV   L   SK + +        +A  L Y H +   ++IH
Sbjct: 75  GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 131
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            DIKP+N+LL      +I+DFG +       S   T + GT  Y+ PE         KVD
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVD 188
Query: 686 VYSYGVLLLEIIC 698
           ++S GVL  E + 
Sbjct: 189 LWSLGVLCYEFLV 201

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 87/193 (45%), Gaps = 10/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG VY       S   +A+K L     +    E + + EV       H N++RL 
Sbjct: 16  LGKGKFGNVYLA-REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           GY  +     L+ E+   GTV   L   SK + +        +A  L Y H +   ++IH
Sbjct: 75  GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 131
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            DIKP+N+LL      +I+DFG +       S    A+ GT  Y+ PE         KVD
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVD 188
Query: 686 VYSYGVLLLEIIC 698
           ++S GVL  E + 
Sbjct: 189 LWSLGVLCYEFLV 201

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 115/266 (43%), Gaps = 28/266 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG VY       S   +A+K L     +    E + + EV       H N++RL 
Sbjct: 19  LGKGKFGNVYLA-REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           GY  +     L+ E+   GTV   L   SK + +        +A  L Y H +   ++IH
Sbjct: 78  GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 134
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            DIKP+N+LL      +I+DFG +       S    A+ GT  Y+ PE         KVD
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVD 191
Query: 686 VYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTML 745
           ++S GVL  E +  +   +                + YQE T + +   +    + VT  
Sbjct: 192 LWSLGVLCYEFLVGKPPFEA---------------NTYQE-TYKRISRVEFTFPDFVTEG 235
Query: 746 HRFVMVAFWCIQEDPSHRPTMRKVTQ 771
            R ++     ++ +PS RP +R+V +
Sbjct: 236 ARDLISRL--LKHNPSQRPMLREVLE 259

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH---VAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F ++LG+G FG+V     +    N    VAVKKL    ++  ++F+ E+  +    H N+
Sbjct: 14  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 562 VRLLGYCDEG--QNRLLVYEFMSNGTVASFLFGDSKPNWKLRT-EIAMGIAGGLFYLHEE 618
           V+  G C     +N  L+ E++  G++  +L    +    ++  +    I  G+ YL   
Sbjct: 74  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--- 130
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG--YVAPEWFR 676
              + IH D+  +NIL+++    +I DFGL K+L  D+        G     + APE   
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLT 190
Query: 677 NMPITVKVDVYSYGVLLLEII 697
               +V  DV+S+GV+L E+ 
Sbjct: 191 ESKFSVASDVWSFGVVLYELF 211

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 132/306 (43%), Gaps = 64/306 (20%)
Query: 509 LGRGAFGTVYK----GFVNMGSSNHVAVKKLNSVFQDSEK-----EFKAEVNGIGQTHHK 559
           LGRGAFG V +    G     +   VAVK L      SE      E K  ++ IG  HH 
Sbjct: 26  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH-IG--HHL 82
Query: 560 NLVRLLGYCDE-GQNRLLVYEFMSNGTVASFLFGDSKPN----WKLRTE----------- 603
           N+V LLG C + G   +++ EF   G ++++L   SK N    +K+  E           
Sbjct: 83  NVVNLLGACTKPGGPLMVITEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 604 ---IAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN 660
               +  +A G+ +L    C   IH D+  +NILL +    +I DFGLA+ +  D  +  
Sbjct: 141 LICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 197
Query: 661 TA-IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRN------IDNEISKVDKA 713
               R    ++APE   +   T++ DV+S+GVLL EI  L  +      ID E  +    
Sbjct: 198 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR---- 253
Query: 714 ILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQML 773
                   R +E T     +     M   TML         C   +PS RPT  ++ + L
Sbjct: 254 --------RLKEGTRMRAPDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVEHL 296
Query: 774 EGVVEV 779
             +++ 
Sbjct: 297 GNLLQA 302

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 96/194 (49%), Gaps = 13/194 (6%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           + +G+G+FG VYKG  N  +   VA+K ++    +D  ++ + E+  + Q     + R  
Sbjct: 25  DRIGKGSFGEVYKGIDNH-TKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYF 83
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM---GIAGGLFYLHEECCTQ 622
           G   +     ++ E++  G+    L    KP     T IA     I  GL YLH E   +
Sbjct: 84  GSYLKSTKLWIIMEYLGGGSALDLL----KPGPLEETYIATILREILKGLDYLHSE---R 136
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH DIK  N+LL +  + +++DFG+A  LT  Q   N  + GT  ++APE  +      
Sbjct: 137 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDF 195
Query: 683 KVDVYSYGVLLLEI 696
           K D++S G+  +E+
Sbjct: 196 KADIWSLGITAIEL 209

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 87/193 (45%), Gaps = 10/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG VY       S   +A+K L     +    E + + EV       H N++RL 
Sbjct: 19  LGKGKFGNVYLA-REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           GY  +     L+ E+   GTV   L   SK + +        +A  L Y H +   ++IH
Sbjct: 78  GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 134
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            DIKP+N+LL      +I+DFG +       S   T + GT  Y+ PE         KVD
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 191
Query: 686 VYSYGVLLLEIIC 698
           ++S GVL  E + 
Sbjct: 192 LWSLGVLCYEFLV 204

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 87/193 (45%), Gaps = 10/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG VY       S   +A+K L     +    E + + EV       H N++RL 
Sbjct: 20  LGKGKFGNVYLA-REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 78
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           GY  +     L+ E+   GTV   L   SK + +        +A  L Y H +   ++IH
Sbjct: 79  GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 135
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            DIKP+N+LL      +I+DFG +       S   T + GT  Y+ PE         KVD
Sbjct: 136 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 192
Query: 686 VYSYGVLLLEIIC 698
           ++S GVL  E + 
Sbjct: 193 LWSLGVLCYEFLV 205

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 73.6 bits (179), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 87/193 (45%), Gaps = 10/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG VY       S   +A+K L     +    E + + EV       H N++RL 
Sbjct: 16  LGKGKFGNVYLA-REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           GY  +     L+ E+   GTV   L   SK + +        +A  L Y H +   ++IH
Sbjct: 75  GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 131
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            DIKP+N+LL      +I+DFG +       S   T + GT  Y+ PE         KVD
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 686 VYSYGVLLLEIIC 698
           ++S GVL  E + 
Sbjct: 189 LWSLGVLCYEFLV 201

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 96/191 (50%), Gaps = 6/191 (3%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           E++G+GA GTVY    ++ +   VA++++N   Q  ++    E+  + +  + N+V  L 
Sbjct: 27  EKIGQGASGTVYTAM-DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD 85
Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHC 626
               G    +V E+++ G++   +        ++   +       L +LH     Q+IH 
Sbjct: 86  SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA-VCRECLQALEFLH---SNQVIHR 141
Query: 627 DIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDV 686
           DIK  NILL    + +++DFG    +T +QS  +  + GT  ++APE         KVD+
Sbjct: 142 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKVDI 200
Query: 687 YSYGVLLLEII 697
           +S G++ +E+I
Sbjct: 201 WSLGIMAIEMI 211

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 130/303 (42%), Gaps = 58/303 (19%)
Query: 509 LGRGAFGTVYK----GFVNMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQT-HHKNLV 562
           LGRGAFG V +    G     +   VAVK L      SE +   +E+  +    HH N+V
Sbjct: 35  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 563 RLLGYCDE-GQNRLLVYEFMSNGTVASFLFGDSKPN----WKLRTE-------------- 603
            LLG C + G   +++ EF   G ++++L   SK N    +K+  E              
Sbjct: 95  NLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 604 IAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA- 662
            +  +A G+ +L    C   IH D+  +NILL +    +I DFGLA+ +  D        
Sbjct: 153 YSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRN------IDNEISKVDKAILT 716
            R    ++APE   +   T++ DV+S+GVLL EI  L  +      ID E  +       
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR------- 262
Query: 717 DWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV 776
                R +E T     +     M   TML         C   +PS RPT  ++ + L  +
Sbjct: 263 -----RLKEGTRMRAPDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVEHLGNL 308
Query: 777 VEV 779
           ++ 
Sbjct: 309 LQA 311

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 124/269 (46%), Gaps = 30/269 (11%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           E++G+G+FG V+KG  N  +   VA+K ++    +D  ++ + E+  + Q     + +  
Sbjct: 28  EKIGKGSFGEVFKGIDNR-TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 86
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM---GIAGGLFYLHEECCTQ 622
           G   +     ++ E++  G+    L    +P     T+IA     I  GL YLH E   +
Sbjct: 87  GSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSE---K 139
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH DIK  N+LL +H   +++DFG+A  LT  Q   N  + GT  ++APE  +      
Sbjct: 140 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDS 198
Query: 683 KVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV 742
           K D++S G+  +E +       +E+  +    L      +    TLE          N  
Sbjct: 199 KADIWSLGITAIE-LARGEPPHSELHPMKVLFLI----PKNNPPTLEG---------NYS 244
Query: 743 TMLHRFVMVAFWCIQEDPSHRPTMRKVTQ 771
             L  FV     C+ ++PS RPT +++ +
Sbjct: 245 KPLKEFVEA---CLNKEPSFRPTAKELLK 270

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 96/191 (50%), Gaps = 6/191 (3%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           E++G+GA GTVY    ++ +   VA++++N   Q  ++    E+  + +  + N+V  L 
Sbjct: 26  EKIGQGASGTVYTAM-DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD 84
Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHC 626
               G    +V E+++ G++   +        ++   +       L +LH     Q+IH 
Sbjct: 85  SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI-AAVCRECLQALEFLH---SNQVIHR 140
Query: 627 DIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDV 686
           DIK  NILL    + +++DFG    +T +QS  +  + GT  ++APE         KVD+
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GTPYWMAPEVVTRKAYGPKVDI 199
Query: 687 YSYGVLLLEII 697
           +S G++ +E+I
Sbjct: 200 WSLGIMAIEMI 210

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 130/303 (42%), Gaps = 58/303 (19%)
Query: 509 LGRGAFGTVYK----GFVNMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQT-HHKNLV 562
           LGRGAFG V +    G     +   VAVK L      SE +   +E+  +    HH N+V
Sbjct: 26  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 563 RLLGYCDE-GQNRLLVYEFMSNGTVASFLFGDSKPN----WKLRTE-------------- 603
            LLG C + G   +++ EF   G ++++L   SK N    +K+  E              
Sbjct: 86  NLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 604 IAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA- 662
            +  +A G+ +L    C   IH D+  +NILL +    +I DFGLA+ +  D        
Sbjct: 144 YSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRN------IDNEISKVDKAILT 716
            R    ++APE   +   T++ DV+S+GVLL EI  L  +      ID E  +       
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR------- 253
Query: 717 DWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV 776
                R +E T     +     M   TML         C   +PS RPT  ++ + L  +
Sbjct: 254 -----RLKEGTRMRAPDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVEHLGNL 299
Query: 777 VEV 779
           ++ 
Sbjct: 300 LQA 302

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 87/193 (45%), Gaps = 10/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG VY       S   +A+K L     +    E + + EV       H N++RL 
Sbjct: 17  LGKGKFGNVYLA-REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 75
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           GY  +     L+ E+   GTV   L   SK + +        +A  L Y H +   ++IH
Sbjct: 76  GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 132
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            DIKP+N+LL      +I+DFG +       S   T + GT  Y+ PE         KVD
Sbjct: 133 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVD 189
Query: 686 VYSYGVLLLEIIC 698
           ++S GVL  E + 
Sbjct: 190 LWSLGVLCYEFLV 202

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 86/193 (44%), Gaps = 10/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG VY       S   +A+K L     +    E + + EV       H N++RL 
Sbjct: 21  LGKGKFGNVYLA-REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           GY  +     L+ E+   G V   L   SK + +        +A  L Y H +   ++IH
Sbjct: 80  GYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 136
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            DIKP+N+LL      +I+DFG +       S   T + GT  Y+ PE         KVD
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 193
Query: 686 VYSYGVLLLEIIC 698
           ++S GVL  E + 
Sbjct: 194 LWSLGVLCYEFLV 206

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 87/193 (45%), Gaps = 10/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG VY       S   +A+K L     +    E + + EV       H N++RL 
Sbjct: 16  LGKGKFGNVYLA-REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           GY  +     L+ E+   GTV   L   SK + +        +A  L Y H +   ++IH
Sbjct: 75  GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 131
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            DIKP+N+LL      +I+DFG +       S   T + GT  Y+ PE         KVD
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 686 VYSYGVLLLEIIC 698
           ++S GVL  E + 
Sbjct: 189 LWSLGVLCYEFLV 201

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 97/191 (50%), Gaps = 6/191 (3%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           E++G+GA GTVY    ++ +   VA++++N   Q  ++    E+  + +  + N+V  L 
Sbjct: 27  EKIGQGASGTVYTAM-DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD 85
Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHC 626
               G    +V E+++ G++   +        ++   +       L +LH     Q+IH 
Sbjct: 86  SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI-AAVCRECLQALEFLH---SNQVIHR 141
Query: 627 DIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDV 686
           +IK  NILL    + +++DFG    +T +QS  +T + GT  ++APE         KVD+
Sbjct: 142 NIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKVDI 200
Query: 687 YSYGVLLLEII 697
           +S G++ +E+I
Sbjct: 201 WSLGIMAIEMI 211

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 87/193 (45%), Gaps = 10/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG VY       S   +A+K L     +    E + + EV       H N++RL 
Sbjct: 16  LGKGKFGNVYLA-REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           GY  +     L+ E+   GTV   L   SK + +        +A  L Y H +   ++IH
Sbjct: 75  GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 131
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            DIKP+N+LL      +I+DFG +       S   T + GT  Y+ PE         KVD
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 686 VYSYGVLLLEIIC 698
           ++S GVL  E + 
Sbjct: 189 LWSLGVLCYEFLV 201

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 124/269 (46%), Gaps = 30/269 (11%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           E++G+G+FG V+KG  N  +   VA+K ++    +D  ++ + E+  + Q     + +  
Sbjct: 13  EKIGKGSFGEVFKGIDNR-TQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM---GIAGGLFYLHEECCTQ 622
           G   +     ++ E++  G+    L    +P     T+IA     I  GL YLH E   +
Sbjct: 72  GSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSE---K 124
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH DIK  N+LL +H   +++DFG+A  LT  Q   N  + GT  ++APE  +      
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQSAYDS 183
Query: 683 KVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV 742
           K D++S G+  +E +       +E+  +    L      +    TLE          N  
Sbjct: 184 KADIWSLGITAIE-LARGEPPHSELHPMKVLFLI----PKNNPPTLEG---------NYS 229
Query: 743 TMLHRFVMVAFWCIQEDPSHRPTMRKVTQ 771
             L  FV     C+ ++PS RPT +++ +
Sbjct: 230 KPLKEFVEA---CLNKEPSFRPTAKELLK 255

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 96/191 (50%), Gaps = 6/191 (3%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           E++G+GA GTVY    ++ +   VA++++N   Q  ++    E+  + +  + N+V  L 
Sbjct: 26  EKIGQGASGTVYTAM-DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD 84
Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHC 626
               G    +V E+++ G++   +        ++   +       L +LH     Q+IH 
Sbjct: 85  SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI-AAVCRECLQALEFLH---SNQVIHR 140
Query: 627 DIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDV 686
           DIK  NILL    + +++DFG    +T +QS  +  + GT  ++APE         KVD+
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV-GTPYWMAPEVVTRKAYGPKVDI 199
Query: 687 YSYGVLLLEII 697
           +S G++ +E+I
Sbjct: 200 WSLGIMAIEMI 210

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 73.2 bits (178), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 88/193 (45%), Gaps = 10/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG VY       S   +A+K L     +    E + + EV       H N++RL 
Sbjct: 20  LGKGKFGNVYLA-RERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLY 78
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           GY  +     L+ E+   GTV   L   S+ + +        +A  L Y H +   ++IH
Sbjct: 79  GYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK---RVIH 135
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            DIKP+N+LL  +   +I+DFG +       S   T + GT  Y+ PE         KVD
Sbjct: 136 RDIKPENLLLGSNGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 192
Query: 686 VYSYGVLLLEIIC 698
           ++S GVL  E + 
Sbjct: 193 LWSLGVLCYEFLV 205

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 73.2 bits (178), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 98/201 (48%), Gaps = 11/201 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH---VAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F ++LG+G FG+V     +    N    VAVKKL    ++  ++F+ E+  +    H N+
Sbjct: 15  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 74
Query: 562 VRLLGYCDEG--QNRLLVYEFMSNGTVASFLFGDSKPNWKLRT-EIAMGIAGGLFYLHEE 618
           V+  G C     +N  L+ E++  G++  +L    +    ++  +    I  G+ YL   
Sbjct: 75  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--- 131
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG--YVAPEWFR 676
              + IH ++  +NIL+++    +I DFGL K+L  D+ +      G     + APE   
Sbjct: 132 GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLT 191
Query: 677 NMPITVKVDVYSYGVLLLEII 697
               +V  DV+S+GV+L E+ 
Sbjct: 192 ESKFSVASDVWSFGVVLYELF 212

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 130/303 (42%), Gaps = 58/303 (19%)
Query: 509 LGRGAFGTVYK----GFVNMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQT-HHKNLV 562
           LGRGAFG V +    G     +   VAVK L      SE +   +E+  +    HH N+V
Sbjct: 26  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 563 RLLGYCDE-GQNRLLVYEFMSNGTVASFLFGDSKPN----WKLRTE-------------- 603
            LLG C + G   +++ EF   G ++++L   SK N    +K+  E              
Sbjct: 86  NLLGACTKPGGPLMVITEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 604 IAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA- 662
            +  +A G+ +L    C   IH D+  +NILL +    +I DFGLA+ +  D        
Sbjct: 144 YSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRN------IDNEISKVDKAILT 716
            R    ++APE   +   T++ DV+S+GVLL EI  L  +      ID E  +       
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR------- 253
Query: 717 DWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV 776
                R +E T     +     M   TML         C   +PS RPT  ++ + L  +
Sbjct: 254 -----RLKEGTRMRAPDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVEHLGNL 299
Query: 777 VEV 779
           ++ 
Sbjct: 300 LQA 302

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 87/193 (45%), Gaps = 10/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG VY       S   +A+K L     +    E + + EV       H N++RL 
Sbjct: 21  LGKGKFGNVYLA-REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           GY  +     L+ E+   GTV   L   SK + +        +A  L Y H +   ++IH
Sbjct: 80  GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 136
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            DIKP+N+LL      +I+DFG +       S   T + GT  Y+ PE         KVD
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVD 193
Query: 686 VYSYGVLLLEIIC 698
           ++S GVL  E + 
Sbjct: 194 LWSLGVLCYEFLV 206

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 130/303 (42%), Gaps = 58/303 (19%)
Query: 509 LGRGAFGTVYK----GFVNMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQT-HHKNLV 562
           LGRGAFG V +    G     +   VAVK L      SE +   +E+  +    HH N+V
Sbjct: 35  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 563 RLLGYCDE-GQNRLLVYEFMSNGTVASFLFGDSKPN----WKLRTE-------------- 603
            LLG C + G   +++ EF   G ++++L   SK N    +K+  E              
Sbjct: 95  NLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 604 IAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA- 662
            +  +A G+ +L    C   IH D+  +NILL +    +I DFGLA+ +  D        
Sbjct: 153 YSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGD 209
Query: 663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRN------IDNEISKVDKAILT 716
            R    ++APE   +   T++ DV+S+GVLL EI  L  +      ID E  +       
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR------- 262
Query: 717 DWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV 776
                R +E T     +     M   TML         C   +PS RPT  ++ + L  +
Sbjct: 263 -----RLKEGTRMRAPDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVEHLGNL 308
Query: 777 VEV 779
           ++ 
Sbjct: 309 LQA 311

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 85/196 (43%), Gaps = 16/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS------EKEFKAEVNGIGQTHHKNLV 562
           LG+G FG VY             +  L  +F+        E + + EV       H N++
Sbjct: 13  LGKGKFGNVYLA----REKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNIL 68
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           RL GY  +     L+ E+   GTV   L   SK + +        +A  L Y H +   +
Sbjct: 69  RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---R 125
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +IH DIKP+N+LL      +I+DFG +       S   T + GT  Y+ PE         
Sbjct: 126 VIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 182
Query: 683 KVDVYSYGVLLLEIIC 698
           KVD++S GVL  E + 
Sbjct: 183 KVDLWSLGVLCYEFLV 198

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 72.8 bits (177), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 130/297 (43%), Gaps = 50/297 (16%)
Query: 509 LGRGAFGTVYK----GFVNMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQT-HHKNLV 562
           LGRGAFG V +    G     +   VAVK L      SE +   +E+  +    HH N+V
Sbjct: 35  LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 563 RLLGYCDE-GQNRLLVYEFMSNGTVASFL------FGDSKPNWK--LRTE----IAMGIA 609
            LLG C + G   +++ EF   G ++++L      F   K  +K  L  E     +  +A
Sbjct: 95  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA-IRGTKG 668
            G+ +L      + IH D+  +NILL +    +I DFGLA+ +  D  +      R    
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 669 YVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRN------IDNEISKVDKAILTDWAYDR 722
           ++APE   +   T++ DV+S+GVLL EI  L  +      ID E  +            R
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXR------------R 259
Query: 723 YQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEV 779
            +E T     +     M   TML         C   +PS RPT  ++ + L  +++ 
Sbjct: 260 LKEGTRMRAPDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVEHLGNLLQA 307

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 505 FKEELGRGAFGTVYKGFVNM-GSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVR 563
           F E LG GAF  V+     + G    +   K +  F+DS  E   E+  + +  H+N+V 
Sbjct: 13  FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLE--NEIAVLKKIKHENIVT 70
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           L    +   +  LV + +S G +   +        K  + +   +   + YLHE     I
Sbjct: 71  LEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHE---NGI 127
Query: 624 IHCDIKPQNILL---DDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPI 680
           +H D+KP+N+L    +++    I+DFGL+K+   +Q+   +   GT GYVAPE     P 
Sbjct: 128 VHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGYVAPEVLAQKPY 184
Query: 681 TVKVDVYSYGVLLLEIIC 698
           +  VD +S GV+   ++C
Sbjct: 185 SKAVDCWSIGVITYILLC 202

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 129/302 (42%), Gaps = 58/302 (19%)
Query: 509 LGRGAFGTVYK----GFVNMGSSNHVAVKKLNSVFQDSEK-----EFKAEVNGIGQTHHK 559
           LGRGAFG V +    G     +   VAVK L      SE      E K  ++ IG  HH 
Sbjct: 37  LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH-IG--HHL 93
Query: 560 NLVRLLGYCDE-GQNRLLVYEFMSNGTVASFL------FGDSKPNWKLRTEIAM------ 606
           N+V LLG C + G   +++ EF   G ++++L      F   KP    +  + +      
Sbjct: 94  NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXY 153
Query: 607 --GIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA-I 663
              +A G+ +L      + IH D+  +NILL +    +I DFGLA+ +  D         
Sbjct: 154 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 664 RGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRN------IDNEISKVDKAILTD 717
           R    ++APE   +   T++ DV+S+GVLL EI  L  +      ID E  +        
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR-------- 262
Query: 718 WAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV 777
               R +E T     +     M   TML         C   +PS RPT  ++ + L  ++
Sbjct: 263 ----RLKEGTRMRAPDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVEHLGNLL 309
Query: 778 EV 779
           + 
Sbjct: 310 QA 311

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 85/303 (28%), Positives = 130/303 (42%), Gaps = 58/303 (19%)
Query: 509 LGRGAFGTVYK----GFVNMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQT-HHKNLV 562
           LGRGAFG V +    G     +   VAVK L      SE +   +E+  +    HH N+V
Sbjct: 37  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 563 RLLGYCDE-GQNRLLVYEFMSNGTVASFLFGDSKPN----WKLRTE-------------- 603
            LLG C + G   +++ EF   G ++++L   SK N    +K   E              
Sbjct: 97  NLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKEAPEDLYKDFLTLEHLIC 154
Query: 604 IAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA- 662
            +  +A G+ +L    C   IH D+  +NILL +    +I DFGLA+ +  D  +     
Sbjct: 155 YSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 211
Query: 663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRN------IDNEISKVDKAILT 716
            R    ++APE   +   T++ DV+S+GVLL EI  L  +      ID E  +       
Sbjct: 212 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR------- 264
Query: 717 DWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV 776
                R +E T     +     M   TML         C   +PS RPT  ++ + L  +
Sbjct: 265 -----RLKEGTRMRAPDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVEHLGNL 310
Query: 777 VEV 779
           ++ 
Sbjct: 311 LQA 313

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 72.4 bits (176), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 130/297 (43%), Gaps = 50/297 (16%)
Query: 509 LGRGAFGTVYK----GFVNMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQT-HHKNLV 562
           LGRGAFG V +    G     +   VAVK L      SE +   +E+  +    HH N+V
Sbjct: 35  LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 563 RLLGYCDE-GQNRLLVYEFMSNGTVASFL------FGDSKPNWK--LRTE----IAMGIA 609
            LLG C + G   +++ EF   G ++++L      F   K  +K  L  E     +  +A
Sbjct: 95  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA-IRGTKG 668
            G+ +L      + IH D+  +NILL +    +I DFGLA+ +  D  +      R    
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 669 YVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRN------IDNEISKVDKAILTDWAYDR 722
           ++APE   +   T++ DV+S+GVLL EI  L  +      ID E  +            R
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR------------R 259
Query: 723 YQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEV 779
            +E T     +     M   TML         C   +PS RPT  ++ + L  +++ 
Sbjct: 260 LKEGTRMRAPDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVEHLGNLLQA 307

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 84/193 (43%), Gaps = 10/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG VY       S   +A+K L     +    E + + EV       H N++RL 
Sbjct: 21  LGKGKFGNVYLA-REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 79
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           GY  +     L+ E+   G V   L   SK + +        +A  L Y H     ++IH
Sbjct: 80  GYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH---SKRVIH 136
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            DIKP+N+LL      +I+DFG +       S     + GT  Y+ PE         KVD
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVD 193
Query: 686 VYSYGVLLLEIIC 698
           ++S GVL  E + 
Sbjct: 194 LWSLGVLCYEFLV 206

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 125/300 (41%), Gaps = 53/300 (17%)
Query: 509 LGRGAFGTVYK----GFVNMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQT-HHKNLV 562
           LGRGAFG V +    G     +   VAVK L      SE +   +E+  +    HH N+V
Sbjct: 36  LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 563 RLLGYCDE-GQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTE---------------IAM 606
            LLG C + G   +++ EF   G ++++L          +T                 + 
Sbjct: 96  NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 607 GIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA-IRG 665
            +A G+ +L    C   IH D+  +NILL +    +I DFGLA+ +  D         R 
Sbjct: 156 QVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 666 TKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRN------IDNEISKVDKAILTDWA 719
              ++APE   +   T++ DV+S+GVLL EI  L  +      ID E  +          
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR---------- 262
Query: 720 YDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEV 779
             R +E T     +     M   TML         C   +PS RPT  ++ + L  +++ 
Sbjct: 263 --RLKEGTRMRAPDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVEHLGNLLQA 311

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 87/193 (45%), Gaps = 10/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG VY       S   +A+K L     +    E + + EV       H N++RL 
Sbjct: 18  LGKGKFGNVYLA-REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 76
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           GY  +     L+ E+   GTV   L   SK + +        +A  L Y H +   ++IH
Sbjct: 77  GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 133
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            DIKP+N+LL      +I++FG +       S   T + GT  Y+ PE         KVD
Sbjct: 134 RDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 190
Query: 686 VYSYGVLLLEIIC 698
           ++S GVL  E + 
Sbjct: 191 LWSLGVLCYEFLV 203

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 10/198 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVR 563
           F++ LG GAF  V     +  +   VA+K +     +  E   + E+  + +  H N+V 
Sbjct: 22  FRDVLGTGAFSEVILA-EDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           L    + G +  L+ + +S G +   +        +  + +   +   + YLH+     I
Sbjct: 81  LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD---LGI 137
Query: 624 IHCDIKPQNIL---LDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPI 680
           +H D+KP+N+L   LD+     ISDFGL+K+   D     +   GT GYVAPE     P 
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKME--DPGSVLSTACGTPGYVAPEVLAQKPY 195
Query: 681 TVKVDVYSYGVLLLEIIC 698
           +  VD +S GV+   ++C
Sbjct: 196 SKAVDCWSIGVIAYILLC 213

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 37/225 (16%)
Query: 505 FKEELGRGAFGTVYK----GFVNMGSSNHVAVKKLNS-VFQDSEKEFKAEVNGIGQTHHK 559
           +  ++G GAFG V++    G +       VAVK L      D + +F+ E   + +  + 
Sbjct: 51  YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNP 110
Query: 560 NLVRLLGYCDEGQNRLLVYEFMSNGTVASFL----------FGDSKPNWKLRTE------ 603
           N+V+LLG C  G+   L++E+M+ G +  FL             S  + + R        
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 170
Query: 604 --------IAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-LLTL 654
                   IA  +A G+ YL E    + +H D+  +N L+ ++   +I+DFGL++ + + 
Sbjct: 171 LSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA 227
Query: 655 D--QSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEII 697
           D  ++  N AI     ++ PE       T + DV++YGV+L EI 
Sbjct: 228 DYYKADGNDAI--PIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 10/198 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVR 563
           F++ LG GAF  V     +  +   VA+K +     +  E   + E+  + +  H N+V 
Sbjct: 22  FRDVLGTGAFSEVILA-EDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           L    + G +  L+ + +S G +   +        +  + +   +   + YLH+     I
Sbjct: 81  LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD---LGI 137
Query: 624 IHCDIKPQNIL---LDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPI 680
           +H D+KP+N+L   LD+     ISDFGL+K+   D     +   GT GYVAPE     P 
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKME--DPGSVLSTACGTPGYVAPEVLAQKPY 195
Query: 681 TVKVDVYSYGVLLLEIIC 698
           +  VD +S GV+   ++C
Sbjct: 196 SKAVDCWSIGVIAYILLC 213

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 86/193 (44%), Gaps = 10/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG VY       S   +A+K L     +    E + + EV       H N++RL 
Sbjct: 18  LGKGKFGNVYLA-REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 76
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           GY  +     L+ E+   GTV   L   SK + +        +A  L Y H +   ++IH
Sbjct: 77  GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 133
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            DIKP+N+LL      +I+DFG +       S     + GT  Y+ PE         KVD
Sbjct: 134 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVD 190
Query: 686 VYSYGVLLLEIIC 698
           ++S GVL  E + 
Sbjct: 191 LWSLGVLCYEFLV 203

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 90/198 (45%), Gaps = 10/198 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVR 563
           FKE LG GAF  V        +    AVK +     +  E   + E+  + +  H+N+V 
Sbjct: 26  FKETLGTGAFSEVVLA-EEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVA 84
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           L    +   +  LV + +S G +   +        K  + +   +   ++YLH      I
Sbjct: 85  LEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHR---MGI 141
Query: 624 IHCDIKPQNILL---DDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPI 680
           +H D+KP+N+L    D+     ISDFGL+K+    +    +   GT GYVAPE     P 
Sbjct: 142 VHRDLKPENLLYYSQDEESKIMISDFGLSKMEG--KGDVMSTACGTPGYVAPEVLAQKPY 199
Query: 681 TVKVDVYSYGVLLLEIIC 698
           +  VD +S GV+   ++C
Sbjct: 200 SKAVDCWSIGVIAYILLC 217

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 87/193 (45%), Gaps = 10/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG VY       S   +A+K L     +    E + + EV       H N++RL 
Sbjct: 19  LGKGKFGNVYLA-REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           GY  +     L+ E+   GTV   L   SK + +        +A  L Y H +   ++IH
Sbjct: 78  GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 134
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            DIKP+N+LL      +I++FG +       S   T + GT  Y+ PE         KVD
Sbjct: 135 RDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 191
Query: 686 VYSYGVLLLEIIC 698
           ++S GVL  E + 
Sbjct: 192 LWSLGVLCYEFLV 204

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 10/198 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVR 563
           F++ LG GAF  V     +  +   VA+K +     +  E   + E+  + +  H N+V 
Sbjct: 22  FRDVLGTGAFSEVILA-EDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           L    + G +  L+ + +S G +   +        +  + +   +   + YLH+     I
Sbjct: 81  LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD---LGI 137
Query: 624 IHCDIKPQNIL---LDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPI 680
           +H D+KP+N+L   LD+     ISDFGL+K+   D     +   GT GYVAPE     P 
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKME--DPGSVLSTACGTPGYVAPEVLAQKPY 195
Query: 681 TVKVDVYSYGVLLLEIIC 698
           +  VD +S GV+   ++C
Sbjct: 196 SKAVDCWSIGVIAYILLC 213

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 12/199 (6%)
Query: 508 ELGRGAFGTVYKGFVNMGSSN---HVAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKNLVR 563
           +LG G FG V     +    N    VAVK L      +   + K E+  +   +H+N+V+
Sbjct: 28  DLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVK 87
Query: 564 LLGYCDE--GQNRLLVYEFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECC 620
             G C E  G    L+ EF+ +G++  +L  + +K N K + + A+ I  G+ YL     
Sbjct: 88  YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR-- 145
Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD-QSHTNTAIRGTKGY-VAPEWFRNM 678
            Q +H D+  +N+L++  +  +I DFGL K +  D +  T    R +  +  APE     
Sbjct: 146 -QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQS 204
Query: 679 PITVKVDVYSYGVLLLEII 697
              +  DV+S+GV L E++
Sbjct: 205 KFYIASDVWSFGVTLHELL 223

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 86/193 (44%), Gaps = 10/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG VY       S   +A+K L     +    E + + EV       H N++RL 
Sbjct: 17  LGKGKFGNVYLA-REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 75
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           GY  +     L+ E+   GTV   L   SK + +        +A  L Y H +   ++IH
Sbjct: 76  GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 132
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            DIKP+N+LL      +I+DFG +       S     + GT  Y+ PE         KVD
Sbjct: 133 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVD 189
Query: 686 VYSYGVLLLEIIC 698
           ++S GVL  E + 
Sbjct: 190 LWSLGVLCYEFLV 202

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 11/201 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH---VAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           +  +LG+G FG+V     +    N    VAVK+L     D +++F+ E+  +   H   +
Sbjct: 11  YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 70
Query: 562 VRLLGYC-DEGQNRL-LVYEFMSNGTVASFL-FGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
           V+  G     G+  L LV E++ +G +  FL    ++ +       +  I  G+ YL   
Sbjct: 71  VKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR 130
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG--YVAPEWFR 676
            C   +H D+  +NIL++   + +I+DFGLAKLL LD+        G     + APE   
Sbjct: 131 RC---VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLS 187
Query: 677 NMPITVKVDVYSYGVLLLEII 697
           +   + + DV+S+GV+L E+ 
Sbjct: 188 DNIFSRQSDVWSFGVVLYELF 208

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 18/197 (9%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG VY       S   +A+K L     +    E + + EV       H N++RL 
Sbjct: 42  LGKGKFGNVYLA-REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 100
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           GY  +     L+ E+   GTV   L   SK + +        +A  L Y H     ++IH
Sbjct: 101 GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIH 157
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR----GTKGYVAPEWFRNMPIT 681
            DIKP+N+LL      +I+DFG +        H  ++ R    GT  Y+ PE        
Sbjct: 158 RDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDLCGTLDYLPPEMIEGRMHD 210
Query: 682 VKVDVYSYGVLLLEIIC 698
            KVD++S GVL  E + 
Sbjct: 211 EKVDLWSLGVLCYEFLV 227

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 10/198 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVR 563
           F++ LG GAF  V     +  +   VA+K +     +  E   + E+  + +  H N+V 
Sbjct: 22  FRDVLGTGAFSEVILA-EDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           L    + G +  L+ + +S G +   +        +  + +   +   + YLH+     I
Sbjct: 81  LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHD---LGI 137
Query: 624 IHCDIKPQNIL---LDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPI 680
           +H D+KP+N+L   LD+     ISDFGL+K+   D     +   GT GYVAPE     P 
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKME--DPGSVLSTACGTPGYVAPEVLAQKPY 195
Query: 681 TVKVDVYSYGVLLLEIIC 698
           +  VD +S GV+   ++C
Sbjct: 196 SKAVDCWSIGVIAYILLC 213

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 100/206 (48%), Gaps = 24/206 (11%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQ-THHKNLVRLL 565
           E +G G +G VYKG      +  +A  K+  V  D E+E K E+N + + +HH+N+    
Sbjct: 30  ELVGNGTYGQVYKG--RHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYY 87
Query: 566 GYCDEGQ------NRLLVYEFMSNGTVASFLFGDSKPNWKLRTE----IAMGIAGGLFYL 615
           G   +           LV EF   G+V   L  ++K N  L+ E    I   I  GL +L
Sbjct: 88  GAFIKKNPPGMDDQLWLVMEFCGAGSVTD-LIKNTKGN-TLKEEWIAYICREILRGLSHL 145
Query: 616 HEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF 675
           H+    ++IH DIK QN+LL ++   ++ DFG++  L       NT I GT  ++APE  
Sbjct: 146 HQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAPEVI 201
Query: 676 R-----NMPITVKVDVYSYGVLLLEI 696
                 +     K D++S G+  +E+
Sbjct: 202 ACDENPDATYDFKSDLWSLGITAIEM 227

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 97/199 (48%), Gaps = 12/199 (6%)
Query: 508 ELGRGAFGTVYKGFVNMGSSN---HVAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKNLVR 563
           +LG G FG V     +    N    VAVK L      +   + K E+  +   +H+N+V+
Sbjct: 16  DLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVK 75
Query: 564 LLGYCDE--GQNRLLVYEFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECC 620
             G C E  G    L+ EF+ +G++  +L  + +K N K + + A+ I  G+ YL     
Sbjct: 76  YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR-- 133
Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD-QSHTNTAIRGTKGY-VAPEWFRNM 678
            Q +H D+  +N+L++  +  +I DFGL K +  D +  T    R +  +  APE     
Sbjct: 134 -QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQS 192
Query: 679 PITVKVDVYSYGVLLLEII 697
              +  DV+S+GV L E++
Sbjct: 193 KFYIASDVWSFGVTLHELL 211

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 86/193 (44%), Gaps = 10/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG VY       S   +A+K L     +    E + + EV       H N++RL 
Sbjct: 19  LGKGKFGNVYLA-REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           GY  +     L+ E+   GTV   L   SK + +        +A  L Y H +   ++IH
Sbjct: 78  GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 134
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            DIKP+N+LL      +I+DFG +       S     + GT  Y+ PE         KVD
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVD 191
Query: 686 VYSYGVLLLEIIC 698
           ++S GVL  E + 
Sbjct: 192 LWSLGVLCYEFLV 204

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 86/193 (44%), Gaps = 10/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG VY       S   +A+K L     +    E + + EV       H N++RL 
Sbjct: 16  LGKGKFGNVYLA-REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 74
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           GY  +     L+ E+   GTV   L   SK + +        +A  L Y H +   ++IH
Sbjct: 75  GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 131
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            DIKP+N+LL      +I+DFG +       S     + GT  Y+ PE         KVD
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 686 VYSYGVLLLEIIC 698
           ++S GVL  E + 
Sbjct: 189 LWSLGVLCYEFLV 201

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-EVNGIGQTHHKNLVRLLGY 567
           LG+G FG V    V      +   K      +  + E  A     I +  +   V  L Y
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAY 251
Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECC------- 620
             E ++ L +   + NG       GD K +     +     A  +FY  E CC       
Sbjct: 252 AYETKDALCLVLTLMNG-------GDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHR 304
Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPI 680
            +I++ D+KP+NILLDDH + RISD GLA  + + +  T     GT GY+APE  +N   
Sbjct: 305 ERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRVGTVGYMAPEVVKNERY 362
Query: 681 TVKVDVYSYGVLLLEIICLRRNIDNEISKVDK 712
           T   D ++ G LL E+I  +        K+ +
Sbjct: 363 TFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR 394

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-EVNGIGQTHHKNLVRLLGY 567
           LG+G FG V    V      +   K      +  + E  A     I +  +   V  L Y
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAY 251
Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECC------- 620
             E ++ L +   + NG       GD K +     +     A  +FY  E CC       
Sbjct: 252 AYETKDALCLVLTLMNG-------GDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHR 304
Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPI 680
            +I++ D+KP+NILLDDH + RISD GLA  + + +  T     GT GY+APE  +N   
Sbjct: 305 ERIVYRDLKPENILLDDHGHIRISDLGLA--VHVPEGQTIKGRVGTVGYMAPEVVKNERY 362
Query: 681 TVKVDVYSYGVLLLEIICLRRNIDNEISKVDK 712
           T   D ++ G LL E+I  +        K+ +
Sbjct: 363 TFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR 394

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 116/270 (42%), Gaps = 36/270 (13%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG VY       S   +A+K L     +    E + + EV       H N++RL 
Sbjct: 19  LGKGKFGNVYLA-REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 77
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           GY  +     L+ E+   GTV   L   SK + +        +A  L Y H +   ++IH
Sbjct: 78  GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIH 134
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR----GTKGYVAPEWFRNMPIT 681
            DIKP+N+LL      +I+DFG +        H  ++ R    GT  Y+ PE        
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWS-------VHAPSSRRDDLCGTLDYLPPEMIEGRMHD 187
Query: 682 VKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN 741
            KVD++S GVL  E +  +   +                + YQE T + +   +    + 
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEA---------------NTYQE-TYKRISRVEFTFPDF 231
Query: 742 VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ 771
           VT   R ++     ++ +PS RP +R+V +
Sbjct: 232 VTEGARDLISRL--LKHNPSQRPMLREVLE 259

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 70.9 bits (172), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 87/193 (45%), Gaps = 10/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG VY       S   +A+K L     +    E + + EV       H N++RL 
Sbjct: 20  LGKGKFGNVYLA-RERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLY 78
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           GY  +     L+ E+   GTV   L   S+ + +        +A  L Y H +   ++IH
Sbjct: 79  GYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK---RVIH 135
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            DIKP+N+LL  +   +I+DFG +       S     + GT  Y+ PE         KVD
Sbjct: 136 RDIKPENLLLGSNGELKIADFGWS---VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVD 192
Query: 686 VYSYGVLLLEIIC 698
           ++S GVL  E + 
Sbjct: 193 LWSLGVLCYEFLV 205

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 106/210 (50%), Gaps = 27/210 (12%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE---------KEFKAEVNGIGQ 555
           +++++G+G FG V+KG + +   + VA+K L  +  DSE         +EF+ EV  +  
Sbjct: 23  YEKQIGKGGFGLVHKGRL-VKDKSVVAIKSL--ILGDSEGETEMIEKFQEFQREVFIMSN 79
Query: 556 THHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP-NWKLRTEIAMGIAGGLFY 614
            +H N+V+L G         +V EF+  G +   L   + P  W ++  + + IA G+ Y
Sbjct: 80  LNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEY 137
Query: 615 LHEECCTQIIHCDIKPQNIL---LDDHYN--ARISDFGLAKLLTLDQSHTNTAIRGTKGY 669
           +  +    I+H D++  NI    LD++    A+++DFGL++       H+ + + G   +
Sbjct: 138 MQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSGLLGNFQW 192
Query: 670 VAPEWF--RNMPITVKVDVYSYGVLLLEII 697
           +APE         T K D YS+ ++L  I+
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTIL 222

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 21/221 (9%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--------EVNGIGQTHHKN 560
           LG+G+F  VY+   ++ +   VA+K +     D +  +KA        EV    Q  H +
Sbjct: 19  LGKGSFAGVYRA-ESIHTGLEVAIKMI-----DKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG-IAGGLFYLHEEC 619
           ++ L  Y ++     LV E   NG +  +L    KP  +      M  I  G+ YLH   
Sbjct: 73  ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH- 131
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP 679
              I+H D+   N+LL  + N +I+DFGLA  L +      T + GT  Y++PE      
Sbjct: 132 --GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCGTPNYISPEIATRSA 188
Query: 680 ITVKVDVYSYGVLLLEIICLRRNIDNEISK--VDKAILTDW 718
             ++ DV+S G +   ++  R   D +  K  ++K +L D+
Sbjct: 189 HGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADY 229

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 126/286 (44%), Gaps = 35/286 (12%)
Query: 509 LGRGAFGTVYKGFVNM--GSSNHVAVK--KLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG G FG+V +G +    G+S  VAVK  KL++  Q   +EF +E   +    H N++RL
Sbjct: 42  LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 565 LGYCDEGQNR-----LLVYEFMSNGTVASFLF------GDSKPNWKLRTEIAMGIAGGLF 613
           LG C E  ++     +++  FM  G + ++L       G      +   +  + IA G+ 
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLA-KLLTLDQSHTNTAIRGTKGYVAP 672
           YL        +H D+  +N +L D     ++DFGL+ K+ + D        +    ++A 
Sbjct: 162 YLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI 218
Query: 673 EWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALV 732
           E   +   T K DV+++GV + EI    R +      V    + D+    ++ +  E  +
Sbjct: 219 ESLADRVYTSKSDVWAFGVTMWEIAT--RGM-TPYPGVQNHEMYDYLLHGHRLKQPEDCL 275
Query: 733 ENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
           +   E M             + C + DP  RPT   +   LE ++E
Sbjct: 276 DELYEIM-------------YSCWRTDPLDRPTFSVLRLQLEKLLE 308

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 126/278 (45%), Gaps = 29/278 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHV--AVKKLNSVFQDSEKE-FKAEVNGIGQTHHKNLVRLL 565
           +G+G FG VY G     + N +  A+K L+ + +  + E F  E   +   +H N++ L+
Sbjct: 29  IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 566 GYC--DEGQNRLLVYEFMSNGTVASFLFGDSK-PNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           G     EG   +L+  +M +G +  F+    + P  K      + +A G+ YL E+   +
Sbjct: 89  GIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ---K 144
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMP 679
            +H D+  +N +LD+ +  +++DFGLA+ +   + ++    R  +    + A E  +   
Sbjct: 145 FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYR 204
Query: 680 ITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM 739
            T K DV+S+GVLL E++         I   D   LT +     +    E   ++  + M
Sbjct: 205 FTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD---LTHFLAQGRRLPQPEYCPDSLYQVM 261
Query: 740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV 777
                          C + DP+ RPT R +   +E +V
Sbjct: 262 QQ-------------CWEADPAVRPTFRVLVGEVEQIV 286

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 100/193 (51%), Gaps = 12/193 (6%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           E+LG G++G+VYK  ++  +   VA+K++    +   +E   E++ + Q    ++V+  G
Sbjct: 35  EKLGEGSYGSVYKA-IHKETGQIVAIKQVP--VESDLQEIIKEISIMQQCDSPHVVKYYG 91
Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAG---GLFYLHEECCTQI 623
              +  +  +V E+   G+V+  +   +K       EIA  +     GL YLH     + 
Sbjct: 92  SYFKNTDLWIVMEYCGAGSVSDIIRLRNKT--LTEDEIATILQSTLKGLEYLH---FMRK 146
Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVK 683
           IH DIK  NILL+   +A+++DFG+A  LT   +  N  I GT  ++APE  + +     
Sbjct: 147 IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVI-GTPFWMAPEVIQEIGYNCV 205
Query: 684 VDVYSYGVLLLEI 696
            D++S G+  +E+
Sbjct: 206 ADIWSLGITAIEM 218

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 25/200 (12%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH----------H 558
           LG G+FG V+    +  +  + A+K L       +KE    +  +  T+          H
Sbjct: 14  LGTGSFGRVHL-IRSRHNGRYYAMKVL-------KKEIVVRLKQVEHTNDERLMLSIVTH 65
Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
             ++R+ G   + Q   ++ +++  G + S L    +    +    A  +   L YLH +
Sbjct: 66  PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK 125
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               II+ D+KP+NILLD + + +I+DFG AK +          + GT  Y+APE     
Sbjct: 126 ---DIIYRDLKPENILLDKNGHIKITDFGFAKYV----PDVTYXLCGTPDYIAPEVVSTK 178
Query: 679 PITVKVDVYSYGVLLLEIIC 698
           P    +D +S+G+L+ E++ 
Sbjct: 179 PYNKSIDWWSFGILIYEMLA 198

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 103/228 (45%), Gaps = 33/228 (14%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGS----SNHVAVKKLNSVFQDS-EKEFKAEV 550
           KE+      F EELG   FG VYKG +   +    +  VA+K L    +    +EF+ E 
Sbjct: 4   KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEA 63
Query: 551 NGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLF--------GDSKPNWKLRT 602
               +  H N+V LLG   + Q   +++ + S+G +  FL         G +  +  +++
Sbjct: 64  MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 123
Query: 603 --------EIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL 654
                    +   IA G+ YL       ++H D+  +N+L+ D  N +ISD GL + +  
Sbjct: 124 ALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYA 180
Query: 655 DQSH-----TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEII 697
              +     +   IR    ++APE       ++  D++SYGV+L E+ 
Sbjct: 181 ADYYKLLGNSLLPIR----WMAPEAIMYGKFSIDSDIWSYGVVLWEVF 224

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 69.3 bits (168), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 103/227 (45%), Gaps = 33/227 (14%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGS----SNHVAVKKLNSVFQDS-EKEFKAEV 550
           KE+      F EELG   FG VYKG +   +    +  VA+K L    +    +EF+ E 
Sbjct: 21  KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEA 80
Query: 551 NGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLF--------GDSKPNWKLRT 602
               +  H N+V LLG   + Q   +++ + S+G +  FL         G +  +  +++
Sbjct: 81  MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 140
Query: 603 --------EIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL 654
                    +   IA G+ YL       ++H D+  +N+L+ D  N +ISD GL + +  
Sbjct: 141 ALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYA 197
Query: 655 DQSH-----TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEI 696
              +     +   IR    ++APE       ++  D++SYGV+L E+
Sbjct: 198 ADYYKLLGNSLLPIR----WMAPEAIMYGKFSIDSDIWSYGVVLWEV 240

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 69.3 bits (168), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 99/221 (44%), Gaps = 41/221 (18%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYC 568
           LG+GAFG V K   N   S + A+KK+    ++      +EV  +   +H+ +VR     
Sbjct: 14  LGQGAFGQVVKA-RNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAW 71
Query: 569 DEGQN-------------RLLVYEFMSNGTVASFLFGDS-----KPNWKLRTEIAMGIAG 610
            E +N               +  E+  NGT+   +  ++        W+L  +I   ++ 
Sbjct: 72  LERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALS- 130
Query: 611 GLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-------LLTLD------QS 657
              Y+H +    IIH D+KP NI +D+  N +I DFGLAK       +L LD       S
Sbjct: 131 ---YIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 658 HTNTAIRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEII 697
              T+  GT  YVA E          K+D+YS G++  E+I
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 96/218 (44%), Gaps = 32/218 (14%)
Query: 509 LGRGAFGTVYKGFV------NMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH----H 558
           LG GAFG V               +  VAVK L      +EK+    V+ +        H
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD--DATEKDLSDLVSEMEMMKMIGKH 100
Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI-------------- 604
           KN++ LLG C +     ++ E+ S G +  +L     P  +   +I              
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 605 --AMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLDQSHTNT 661
                +A G+ YL  + C   IH D+  +N+L+ ++   RI+DFGLA+ +  +D     T
Sbjct: 161 SCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTT 217
Query: 662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
             R    ++APE   +   T + DV+S+GVL+ EI  L
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 94/202 (46%), Gaps = 9/202 (4%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVK--KLNSVFQDSEKE-FKAEVNGIGQTHHKNLVRLL 565
           LG+G+FG V       G+    A+K  K + V QD + E    E   +        +  L
Sbjct: 27  LGKGSFGKVMLA-DRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 566 GYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
             C +  +RL  V E+++ G +   +    K         A  I+ GLF+LH+     II
Sbjct: 86  HSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRG---II 142
Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKV 684
           + D+K  N++LD   + +I+DFG+ K   +D   T     GT  Y+APE     P    V
Sbjct: 143 YRDLKLDNVMLDSEGHIKIADFGMCKEHMMD-GVTTREFCGTPDYIAPEIIAYQPYGKSV 201
Query: 685 DVYSYGVLLLEIICLRRNIDNE 706
           D ++YGVLL E++  +   D E
Sbjct: 202 DWWAYGVLLYEMLAGQPPFDGE 223

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVA--VKKLNSVFQD---SEKEFKAEVNGIGQTHHKNL 561
           EELG G F  V K         + A  +KK  S       S +E + EV+ + Q  H N+
Sbjct: 18  EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           + L    +   + +L+ E +S G +  FL      + +  T     I  G+ YLH     
Sbjct: 78  ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH---TK 134
Query: 622 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
           +I H D+KP+NI+L D      + ++ DFGLA  +       N  I GT  +VAPE    
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--IFGTPEFVAPEIVNY 192
Query: 678 MPITVKVDVYSYGVL 692
            P+ ++ D++S GV+
Sbjct: 193 EPLGLEADMWSIGVI 207

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVA--VKKLNSVFQD---SEKEFKAEVNGIGQTHHKNL 561
           EELG G F  V K         + A  +KK  S       S +E + EV+ + Q  H N+
Sbjct: 18  EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           + L    +   + +L+ E +S G +  FL      + +  T     I  G+ YLH     
Sbjct: 78  ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH---TK 134
Query: 622 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
           +I H D+KP+NI+L D      + ++ DFGLA  +       N  I GT  +VAPE    
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--IFGTPEFVAPEIVNY 192
Query: 678 MPITVKVDVYSYGVL 692
            P+ ++ D++S GV+
Sbjct: 193 EPLGLEADMWSIGVI 207

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 103/202 (50%), Gaps = 18/202 (8%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA----EVNGIGQTHHKNLV 562
           E+LG G + TVYKG +N  +  +VA+K+   V  DSE+   +    E++ + +  H+N+V
Sbjct: 11  EKLGNGTYATVYKG-LNKTTGVYVALKE---VKLDSEEGTPSTAIREISLMKELKHENIV 66
Query: 563 RLLGYCDEGQNRLLVYEFMSNGT---VASFLFGDSKPNWKLR--TEIAMGIAGGLFYLHE 617
           RL           LV+EFM N     + S   G++    +L         +  GL + HE
Sbjct: 67  RLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE 126
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR- 676
               +I+H D+KPQN+L++     ++ DFGLA+   +  +  ++ +  T  Y AP+    
Sbjct: 127 ---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRAPDVLMG 182
Query: 677 NMPITVKVDVYSYGVLLLEIIC 698
           +   +  +D++S G +L E+I 
Sbjct: 183 SRTYSTSIDIWSCGCILAEMIT 204

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 95/222 (42%), Gaps = 40/222 (18%)
Query: 509 LGRGAFGTVYKGFV------NMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH----H 558
           LG GAFG V                  VAVK L S    +EK+    ++ +        H
Sbjct: 36  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS--DATEKDLSDLISEMEMMKMIGKH 93
Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR----------------T 602
           KN++ LLG C +     ++ E+ S G +  +L     P  +                   
Sbjct: 94  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 603 EIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA 662
             A  +A G+ YL  + C   IH D+  +N+L+ +    +I+DFGLA+    D  H +  
Sbjct: 154 SCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDXX 206
Query: 663 IRGTKG-----YVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
            + T G     ++APE   +   T + DV+S+GVLL EI  L
Sbjct: 207 KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 248

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 32/218 (14%)
Query: 509 LGRGAFGTVYKGFV------NMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH----H 558
           LG GAFG V               +  VAVK L      +EK+    V+ +        H
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD--DATEKDLSDLVSEMEMMKMIGKH 100
Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI-------------- 604
           KN++ LLG C +     ++ E+ S G +  +L     P  +   +I              
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 605 --AMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLL-TLDQSHTNT 661
                +A G+ YL  + C   IH D+  +N+L+ ++   +I+DFGLA+ +  +D     T
Sbjct: 161 SCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
             R    ++APE   +   T + DV+S+GVL+ EI  L
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 32/218 (14%)
Query: 509 LGRGAFGTVYKGFV------NMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH----H 558
           LG GAFG V               +  VAVK L      +EK+    V+ +        H
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD--DATEKDLSDLVSEMEMMKMIGKH 100
Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI-------------- 604
           KN++ LLG C +     ++ E+ S G +  +L     P  +   +I              
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 605 --AMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLL-TLDQSHTNT 661
                +A G+ YL  + C   IH D+  +N+L+ ++   +I+DFGLA+ +  +D     T
Sbjct: 161 SCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
             R    ++APE   +   T + DV+S+GVL+ EI  L
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 100/199 (50%), Gaps = 19/199 (9%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG- 566
           ELG GAFG VYK   N  +    A K + +  ++  +++  E+  +    H  +V+LLG 
Sbjct: 26  ELGDGAFGKVYKA-KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA 84
Query: 567 YCDEGQNRLLVYEFMSNGTVASFLF----GDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           Y  +G+  +++ EF   G V + +     G ++P  ++   +   +   L +LH +   +
Sbjct: 85  YYHDGKLWIMI-EFCPGGAVDAIMLELDRGLTEPQIQV---VCRQMLEALNFLHSK---R 137
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAP-----EWFRN 677
           IIH D+K  N+L+    + R++DFG++    L       +  GT  ++AP     E  ++
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSA-KNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 196
Query: 678 MPITVKVDVYSYGVLLLEI 696
            P   K D++S G+ L+E+
Sbjct: 197 TPYDYKADIWSLGITLIEM 215

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 9/182 (4%)
Query: 520 GFVNMGSSNH----VAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRL 575
           G V + +  H    VAVKK++   Q   +    EV  +   HH N+V +      G    
Sbjct: 59  GIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELW 118
Query: 576 LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILL 635
           +V EF+  G +   +   ++ N +    + + +   L YLH +    +IH DIK  +ILL
Sbjct: 119 VVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILL 174
Query: 636 DDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLE 695
                 ++SDFG    ++ +       + GT  ++APE    +P   +VD++S G++++E
Sbjct: 175 TSDGRIKLSDFGFCAQVSKEVPKRKXLV-GTPYWMAPEVISRLPYGTEVDIWSLGIMVIE 233
Query: 696 II 697
           +I
Sbjct: 234 MI 235

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVA--VKKLNSVFQD---SEKEFKAEVNGIGQTHHKNL 561
           EELG G F  V K         + A  +KK  S       S +E + EV+ + Q  H N+
Sbjct: 18  EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           + L    +   + +L+ E +S G +  FL      + +  T     I  G+ YLH     
Sbjct: 78  ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH---TK 134
Query: 622 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
           +I H D+KP+NI+L D      + ++ DFGLA  +       N  I GT  +VAPE    
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--IFGTPEFVAPEIVNY 192
Query: 678 MPITVKVDVYSYGVL 692
            P+ ++ D++S GV+
Sbjct: 193 EPLGLEADMWSIGVI 207

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 100/199 (50%), Gaps = 19/199 (9%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG- 566
           ELG GAFG VYK   N  +    A K + +  ++  +++  E+  +    H  +V+LLG 
Sbjct: 18  ELGDGAFGKVYKA-KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGA 76
Query: 567 YCDEGQNRLLVYEFMSNGTVASFLF----GDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           Y  +G+  +++ EF   G V + +     G ++P  ++   +   +   L +LH +   +
Sbjct: 77  YYHDGKLWIMI-EFCPGGAVDAIMLELDRGLTEPQIQV---VCRQMLEALNFLHSK---R 129
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAP-----EWFRN 677
           IIH D+K  N+L+    + R++DFG++    L       +  GT  ++AP     E  ++
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSA-KNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 188
Query: 678 MPITVKVDVYSYGVLLLEI 696
            P   K D++S G+ L+E+
Sbjct: 189 TPYDYKADIWSLGITLIEM 207

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVA--VKKLNSVFQD---SEKEFKAEVNGIGQTHHKNL 561
           EELG G F  V K         + A  +KK  S       S +E + EV+ + Q  H N+
Sbjct: 18  EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           + L    +   + +L+ E +S G +  FL      + +  T     I  G+ YLH     
Sbjct: 78  ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH---TK 134
Query: 622 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
           +I H D+KP+NI+L D      + ++ DFGLA  +       N  I GT  +VAPE    
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--IFGTPEFVAPEIVNY 192
Query: 678 MPITVKVDVYSYGVL 692
            P+ ++ D++S GV+
Sbjct: 193 EPLGLEADMWSIGVI 207

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVA--VKKLNSVFQD---SEKEFKAEVNGIGQTHHKNL 561
           EELG G F  V K         + A  +KK  S       S +E + EV+ + Q  H N+
Sbjct: 18  EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           + L    +   + +L+ E +S G +  FL      + +  T     I  G+ YLH     
Sbjct: 78  ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH---TK 134
Query: 622 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
           +I H D+KP+NI+L D      + ++ DFGLA  +       N  I GT  +VAPE    
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--IFGTPEFVAPEIVNY 192
Query: 678 MPITVKVDVYSYGVL 692
            P+ ++ D++S GV+
Sbjct: 193 EPLGLEADMWSIGVI 207

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 16/200 (8%)
Query: 508 ELGRGAFGTVY---KGFVNMGSSNHVAVKKLNSVFQDSEKE-FKAEVNGIGQTHHKNLVR 563
           +LG G FG V        N G+   VAVK L +      +  +K E++ +   +H+++++
Sbjct: 21  DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 564 LLGYC-DEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
             G C D+G+  L LV E++  G++  +L   S    +L    A  I  G+ YLH +   
Sbjct: 81  YKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL-FAQQICEGMAYLHSQ--- 136
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG----YVAPEWFRN 677
             IH ++  +N+LLD+    +I DFGLAK   + + H    +R        + APE  + 
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAK--AVPEGHEYYRVREDGDSPVFWYAPECLKE 194
Query: 678 MPITVKVDVYSYGVLLLEII 697
                  DV+S+GV L E++
Sbjct: 195 YKFYYASDVWSFGVTLYELL 214

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 105/210 (50%), Gaps = 27/210 (12%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE---------KEFKAEVNGIGQ 555
           +++++G+G FG V+KG + +   + VA+K L  +  DSE         +EF+ EV  +  
Sbjct: 23  YEKQIGKGGFGLVHKGRL-VKDKSVVAIKSL--ILGDSEGETEMIEKFQEFQREVFIMSN 79
Query: 556 THHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP-NWKLRTEIAMGIAGGLFY 614
            +H N+V+L G         +V EF+  G +   L   + P  W ++  + + IA G+ Y
Sbjct: 80  LNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEY 137
Query: 615 LHEECCTQIIHCDIKPQNIL---LDDHYN--ARISDFGLAKLLTLDQSHTNTAIRGTKGY 669
           +  +    I+H D++  NI    LD++    A+++DF L++       H+ + + G   +
Sbjct: 138 MQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSGLLGNFQW 192
Query: 670 VAPEWF--RNMPITVKVDVYSYGVLLLEII 697
           +APE         T K D YS+ ++L  I+
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTIL 222

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 16/200 (8%)
Query: 508 ELGRGAFGTVY---KGFVNMGSSNHVAVKKLNSVFQDSEKE-FKAEVNGIGQTHHKNLVR 563
           +LG G FG V        N G+   VAVK L +      +  +K E++ +   +H+++++
Sbjct: 21  DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 564 LLGYC-DEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
             G C D+G+  L LV E++  G++  +L   S    +L    A  I  G+ YLH +   
Sbjct: 81  YKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL-FAQQICEGMAYLHAQ--- 136
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG----YVAPEWFRN 677
             IH ++  +N+LLD+    +I DFGLAK   + + H    +R        + APE  + 
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAK--AVPEGHEYYRVREDGDSPVFWYAPECLKE 194
Query: 678 MPITVKVDVYSYGVLLLEII 697
                  DV+S+GV L E++
Sbjct: 195 YKFYYASDVWSFGVTLYELL 214

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 105/210 (50%), Gaps = 27/210 (12%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE---------KEFKAEVNGIGQ 555
           +++++G+G FG V+KG + +   + VA+K L  +  DSE         +EF+ EV  +  
Sbjct: 23  YEKQIGKGGFGLVHKGRL-VKDKSVVAIKSL--ILGDSEGETEMIEKFQEFQREVFIMSN 79
Query: 556 THHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP-NWKLRTEIAMGIAGGLFY 614
            +H N+V+L G         +V EF+  G +   L   + P  W ++  + + IA G+ Y
Sbjct: 80  LNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEY 137
Query: 615 LHEECCTQIIHCDIKPQNIL---LDDHYN--ARISDFGLAKLLTLDQSHTNTAIRGTKGY 669
           +  +    I+H D++  NI    LD++    A+++DFG ++       H+ + + G   +
Sbjct: 138 MQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVSGLLGNFQW 192
Query: 670 VAPEWF--RNMPITVKVDVYSYGVLLLEII 697
           +APE         T K D YS+ ++L  I+
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTIL 222

>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 101/205 (49%), Gaps = 24/205 (11%)
Query: 510 GRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLVRLLGYC 568
            RG FG V+K  +    + +VAVK      QD +  + + EV  +    H+N+++ +G  
Sbjct: 33  ARGRFGCVWKAQL---LNEYVAVKIFP--IQDKQSWQNEYEVYSLPGMKHENILQFIGAE 87
Query: 569 DEGQ----NRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECC---- 620
             G     +  L+  F   G+++ FL  +   +W     IA  +A GL YLHE+      
Sbjct: 88  KRGTSVDVDLWLITAFHEKGSLSDFLKANV-VSWNELCHIAETMARGLAYLHEDIPGLKD 146
Query: 621 ---TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR-GTKGYVAPEWFR 676
                I H DIK +N+LL ++  A I+DFGLA      +S  +T  + GT+ Y+APE   
Sbjct: 147 GHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLE 206
Query: 677 NM-----PITVKVDVYSYGVLLLEI 696
                     +++D+Y+ G++L E+
Sbjct: 207 GAINFQRDAFLRIDMYAMGLVLWEL 231

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 105/221 (47%), Gaps = 39/221 (17%)
Query: 501 VTRGFKEE-------LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS--EKEFKAEVN 551
           + R FKE        LG G FGTV+KG V +     + +     V +D    + F+A  +
Sbjct: 24  LARIFKETELRKLKVLGSGVFGTVHKG-VWIPEGESIKIPVCIKVIEDKSGRQSFQAVTD 82
Query: 552 ---GIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLF---GDSKP----NWKLR 601
               IG   H ++VRLLG C  G +  LV +++  G++   +    G   P    NW ++
Sbjct: 83  HMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ 141
Query: 602 TEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ----- 656
                 IA G++YL E     ++H ++  +N+LL      +++DFG+A LL  D      
Sbjct: 142 ------IAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLY 192
Query: 657 SHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEII 697
           S   T I+    ++A E       T + DV+SYGV + E++
Sbjct: 193 SEAKTPIK----WMALESIHFGKYTHQSDVWSYGVTVWELM 229

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 101/206 (49%), Gaps = 11/206 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNL 561
            +E LG G+FG V K   +  +   VA+K ++       D     + E++ +    H ++
Sbjct: 13  IRETLGEGSFGKV-KLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHI 71
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           ++L        + ++V E+ + G +  ++    +            I   + Y H     
Sbjct: 72  IKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH--- 127
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR-NMPI 680
           +I+H D+KP+N+LLDD+ N +I+DFGL+ ++T D +   T+  G+  Y APE     +  
Sbjct: 128 KIVHRDLKPENLLLDDNLNVKIADFGLSNIMT-DGNFLKTSC-GSPNYAAPEVINGKLYA 185
Query: 681 TVKVDVYSYGVLLLEIICLRRNIDNE 706
             +VDV+S G++L  ++  R   D+E
Sbjct: 186 GPEVDVWSCGIVLYVMLVGRLPFDDE 211

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 14/195 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVA--VKKLNSVFQDS---EKEFKAEVNGIGQTHHKNL 561
           EELG G F  V K         + A  +KK  S         +E + EV+ + Q  H N+
Sbjct: 18  EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNI 77
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           + L    +   + +L+ E +S G +  FL      + +  T     I  G+ YLH     
Sbjct: 78  ITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH---TK 134
Query: 622 QIIHCDIKPQNILLDDHY----NARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
           +I H D+KP+NI+L D      + ++ DFGLA  +       N  I GT  +VAPE    
Sbjct: 135 KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--IFGTPEFVAPEIVNY 192
Query: 678 MPITVKVDVYSYGVL 692
            P+ ++ D++S GV+
Sbjct: 193 EPLGLEADMWSIGVI 207

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 105/221 (47%), Gaps = 39/221 (17%)
Query: 501 VTRGFKEE-------LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVN 551
           + R FKE        LG G FGTV+KG V +     + +     V +D    + F+A  +
Sbjct: 6   LARIFKETELRKLKVLGSGVFGTVHKG-VWIPEGESIKIPVCIKVIEDKSGRQSFQAVTD 64
Query: 552 ---GIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLF---GDSKP----NWKLR 601
               IG   H ++VRLLG C  G +  LV +++  G++   +    G   P    NW ++
Sbjct: 65  HMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQ 123
Query: 602 TEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ----- 656
                 IA G++YL E     ++H ++  +N+LL      +++DFG+A LL  D      
Sbjct: 124 ------IAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLY 174
Query: 657 SHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEII 697
           S   T I+    ++A E       T + DV+SYGV + E++
Sbjct: 175 SEAKTPIK----WMALESIHFGKYTHQSDVWSYGVTVWELM 211

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 32/218 (14%)
Query: 509 LGRGAFGTVYKGFV------NMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH----H 558
           LG GAFG V               +  VAVK L      +EK+    V+ +        H
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD--DATEKDLSDLVSEMEMMKMIGKH 100
Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI-------------- 604
           KN++ LLG C +     ++ E+ S G +  +L     P  +   +I              
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 605 --AMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLDQSHTNT 661
                +A G+ YL  + C   IH D+  +N+L+ ++   +I+DFGLA+ +  +D     T
Sbjct: 161 SCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTT 217
Query: 662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
             R    ++APE   +   T + DV+S+GVL+ EI  L
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 32/218 (14%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ---DSEKEFKAEVNGIGQTHHKNLVR 563
           ++LG+GA+G V+K  ++  +   VAVKK+   FQ   D+++ F+  +     + H+N+V 
Sbjct: 15  KKLGKGAYGIVWKS-IDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVN 73
Query: 564 LLGY--CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           LL     D  ++  LV+++M     A       +P  K    +   +   + YLH     
Sbjct: 74  LLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHK--QYVVYQLIKVIKYLH---SG 128
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK-------------- 667
            ++H D+KP NILL+   + +++DFGL++     +  TN                     
Sbjct: 129 GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILT 188
Query: 668 GYVAPEWFRNMPI-------TVKVDVYSYGVLLLEIIC 698
            YVA  W+R   I       T  +D++S G +L EI+C
Sbjct: 189 DYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILC 226

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 32/218 (14%)
Query: 509 LGRGAFGTVYKGFV------NMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH----H 558
           LG GAFG V               +  VAVK L      +EK+    V+ +        H
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD--DATEKDLSDLVSEMEMMKMIGKH 100
Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI-------------- 604
           KN++ LLG C +     ++ E+ S G +  +L     P  +   +I              
Sbjct: 101 KNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 605 --AMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLL-TLDQSHTNT 661
                +A G+ YL  + C   IH D+  +N+L+ ++   +I+DFGLA+ +  +D     T
Sbjct: 161 SCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
             R    ++APE   +   T + DV+S+GVL+ EI  L
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 94/218 (43%), Gaps = 32/218 (14%)
Query: 509 LGRGAFGTVYKGFV------NMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH----H 558
           LG GAFG V                  VAVK L S    +EK+    ++ +        H
Sbjct: 21  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS--DATEKDLSDLISEMEMMKMIGKH 78
Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNW----------------KLRT 602
           KN++ LLG C +     ++ E+ S G +  +L     P                  K   
Sbjct: 79  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 603 EIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLDQSHTNT 661
             A  +A G+ YL  + C   IH D+  +N+L+ +    +I+DFGLA+ +  +D     T
Sbjct: 139 SCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 195
Query: 662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
             R    ++APE   +   T + DV+S+GVLL EI  L
Sbjct: 196 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 233

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 508 ELGRGAFGTVY---KGFVNMGSSNHVAVKKLNSVFQDSEKE-FKAEVNGIGQTHHKNLVR 563
           +LG G FG V        N G+   VAVK L +      +  +K E++ +   +H+++++
Sbjct: 38  DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIK 97
Query: 564 LLGYC-DEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
             G C D G   L LV E++  G++  +L   S    +L    A  I  G+ YLH +   
Sbjct: 98  YKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLL-FAQQICEGMAYLHAQ--- 153
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG----YVAPEWFRN 677
             IH D+  +N+LLD+    +I DFGLAK   + + H    +R        + APE  + 
Sbjct: 154 HYIHRDLAARNVLLDNDRLVKIGDFGLAK--AVPEGHEXYRVREDGDSPVFWYAPECLKE 211
Query: 678 MPITVKVDVYSYGVLLLEII 697
                  DV+S+GV L E++
Sbjct: 212 YKFYYASDVWSFGVTLYELL 231

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 94/218 (43%), Gaps = 32/218 (14%)
Query: 509 LGRGAFGTVYKGFV------NMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH----H 558
           LG GAFG V                  VAVK L S    +EK+    ++ +        H
Sbjct: 36  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS--DATEKDLSDLISEMEMMKMIGKH 93
Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNW----------------KLRT 602
           KN++ LLG C +     ++ E+ S G +  +L     P                  K   
Sbjct: 94  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 603 EIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLDQSHTNT 661
             A  +A G+ YL  + C   IH D+  +N+L+ +    +I+DFGLA+ +  +D     T
Sbjct: 154 SCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
             R    ++APE   +   T + DV+S+GVLL EI  L
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 248

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 28/216 (12%)
Query: 509 LGRGAFGTVYKGFV------NMGSSNHVAVKKL-NSVFQDSEKEFKAEVNGIGQT-HHKN 560
           LG GAFG V               +  VAVK L +   ++   +  +E+  +     HKN
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI---------------- 604
           ++ LLG C +     ++ E+ S G +  +L     P  +   +I                
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 605 AMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLL-TLDQSHTNTAI 663
              +A G+ YL  + C   IH D+  +N+L+ ++   +I+DFGLA+ +  +D     T  
Sbjct: 163 TYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 664 RGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
           R    ++APE   +   T + DV+S+GVL+ EI  L
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 11/194 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           +G+G F  V K   ++ +   VAVK ++    +S   +K F+ EV  +   +H N+V+L 
Sbjct: 22  IGKGNFAKV-KLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLF 79
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
              +  +   LV E+ S G V  +L    +   K        I   + Y H++    I+H
Sbjct: 80  EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF---IVH 136
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT-VKV 684
            D+K +N+LLD   N +I+DFG +   T    +   A  G   Y APE F+       +V
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTF--GNKLDAFCGAPPYAAPELFQGKKYDGPEV 194
Query: 685 DVYSYGVLLLEIIC 698
           DV+S GV+L  ++ 
Sbjct: 195 DVWSLGVILYTLVS 208

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 94/218 (43%), Gaps = 32/218 (14%)
Query: 509 LGRGAFGTVYKGFV------NMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH----H 558
           LG GAFG V                  VAVK L S    +EK+    ++ +        H
Sbjct: 25  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS--DATEKDLSDLISEMEMMKMIGKH 82
Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNW----------------KLRT 602
           KN++ LLG C +     ++ E+ S G +  +L     P                  K   
Sbjct: 83  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 603 EIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLDQSHTNT 661
             A  +A G+ YL  + C   IH D+  +N+L+ +    +I+DFGLA+ +  +D     T
Sbjct: 143 SCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 199
Query: 662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
             R    ++APE   +   T + DV+S+GVLL EI  L
Sbjct: 200 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 237

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 94/218 (43%), Gaps = 32/218 (14%)
Query: 509 LGRGAFGTVYKGFV------NMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH----H 558
           LG GAFG V                  VAVK L S    +EK+    ++ +        H
Sbjct: 29  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS--DATEKDLSDLISEMEMMKMIGKH 86
Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNW----------------KLRT 602
           KN++ LLG C +     ++ E+ S G +  +L     P                  K   
Sbjct: 87  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 603 EIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLDQSHTNT 661
             A  +A G+ YL  + C   IH D+  +N+L+ +    +I+DFGLA+ +  +D     T
Sbjct: 147 SCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 203
Query: 662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
             R    ++APE   +   T + DV+S+GVLL EI  L
Sbjct: 204 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 241

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 32/218 (14%)
Query: 509 LGRGAFGTVYKGFV------NMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH----H 558
           LG GAFG V               +  VAVK L      +EK+    V+ +        H
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD--DATEKDLSDLVSEMEMMKMIGKH 100
Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI-------------- 604
           KN++ LLG C +     ++ E+ S G +  +L     P  +   +I              
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 605 --AMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLL-TLDQSHTNT 661
                +A G+ YL  + C   IH D+  +N+L+ ++   +I+DFGLA+ +  +D     T
Sbjct: 161 SCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
             R    ++APE   +   T + DV+S+GVL+ EI  L
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 93/193 (48%), Gaps = 12/193 (6%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA----EVNGIGQTHHKNLVRL 564
           +G G++G V K   N  +   VA+KK   +  D +K  K     E+  + Q  H+NLV L
Sbjct: 33  VGEGSYGMVMKC-RNKDTGRIVAIKKF--LESDDDKMVKKIAMREIKLLKQLRHENLVNL 89
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
           L  C + +   LV+EF+ +  +       +  ++++  +    I  G+ + H      II
Sbjct: 90  LEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH---NII 146
Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR-NMPITVK 683
           H DIKP+NIL+      ++ DFG A+ L       +  +  T+ Y APE    ++     
Sbjct: 147 HRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEV-ATRWYRAPELLVGDVKYGKA 205
Query: 684 VDVYSYGVLLLEI 696
           VDV++ G L+ E+
Sbjct: 206 VDVWAIGCLVTEM 218

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 94/218 (43%), Gaps = 32/218 (14%)
Query: 509 LGRGAFGTVYKGFV------NMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH----H 558
           LG GAFG V                  VAVK L S    +EK+    ++ +        H
Sbjct: 36  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS--DATEKDLSDLISEMEMMKMIGKH 93
Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNW----------------KLRT 602
           KN++ LLG C +     ++ E+ S G +  +L     P                  K   
Sbjct: 94  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 603 EIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLDQSHTNT 661
             A  +A G+ YL  + C   IH D+  +N+L+ +    +I+DFGLA+ +  +D     T
Sbjct: 154 SCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
             R    ++APE   +   T + DV+S+GVLL EI  L
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 248

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 94/218 (43%), Gaps = 32/218 (14%)
Query: 509 LGRGAFGTVYKGFV------NMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH----H 558
           LG GAFG V                  VAVK L S    +EK+    ++ +        H
Sbjct: 36  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS--DATEKDLSDLISEMEMMKMIGKH 93
Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNW----------------KLRT 602
           KN++ LLG C +     ++ E+ S G +  +L     P                  K   
Sbjct: 94  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 603 EIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLDQSHTNT 661
             A  +A G+ YL  + C   IH D+  +N+L+ +    +I+DFGLA+ +  +D     T
Sbjct: 154 SCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
             R    ++APE   +   T + DV+S+GVLL EI  L
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 248

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 94/218 (43%), Gaps = 32/218 (14%)
Query: 509 LGRGAFGTVYKGFV------NMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH----H 558
           LG GAFG V                  VAVK L S    +EK+    ++ +        H
Sbjct: 28  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS--DATEKDLSDLISEMEMMKMIGKH 85
Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNW----------------KLRT 602
           KN++ LLG C +     ++ E+ S G +  +L     P                  K   
Sbjct: 86  KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 603 EIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLDQSHTNT 661
             A  +A G+ YL  + C   IH D+  +N+L+ +    +I+DFGLA+ +  +D     T
Sbjct: 146 SCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 202
Query: 662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
             R    ++APE   +   T + DV+S+GVLL EI  L
Sbjct: 203 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 240

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 21/208 (10%)
Query: 506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIG--QTH------ 557
           K+ +GRG   +V +  V+  + +  AVK +    +    E   EV      +TH      
Sbjct: 99  KDVIGRGV-SSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVA 157
Query: 558 -HKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLH 616
            H +++ L+   +      LV++ M  G +  +L      + K    I   +   + +LH
Sbjct: 158 GHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLH 217
Query: 617 EECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR 676
                 I+H D+KP+NILLDD+   R+SDFG +    L+       + GT GY+APE  +
Sbjct: 218 ---ANNIVHRDLKPENILLDDNMQIRLSDFGFS--CHLEPGEKLRELCGTPGYLAPEILK 272
Query: 677 -NMPIT-----VKVDVYSYGVLLLEIIC 698
            +M  T      +VD+++ GV+L  ++ 
Sbjct: 273 CSMDETHPGYGKEVDLWACGVILFTLLA 300

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 105/225 (46%), Gaps = 12/225 (5%)
Query: 478 PHQEDQGVSYMNLRCFTYKELVEV--TRGFKE---ELGRGAFGTVYKGFVNMGSSNHVAV 532
           P +E Q VS+   R    + +V+    R + +   ++G G+ G V    V   S   VAV
Sbjct: 4   PQREPQRVSHEQFRA-ALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVR-SSGKLVAV 61
Query: 533 KKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFG 592
           KK++   Q   +    EV  +    H+N+V +      G    +V EF+  G +   +  
Sbjct: 62  KKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVT 120
Query: 593 DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLL 652
            ++ N +    + + +   L  LH +    +IH DIK  +ILL      ++SDFG    +
Sbjct: 121 HTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQV 177
Query: 653 TLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEII 697
           + +       + GT  ++APE    +P   +VD++S G++++E++
Sbjct: 178 SKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 221

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 11/194 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           +G+G F  V K   ++ +   VAVK ++    +S   +K F+ EV      +H N+V+L 
Sbjct: 22  IGKGNFAKV-KLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNHPNIVKLF 79
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
              +  +   LV E+ S G V  +L    +   K        I   + Y H++    I+H
Sbjct: 80  EVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKF---IVH 136
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT-VKV 684
            D+K +N+LLD   N +I+DFG +   T    +   A  G   Y APE F+       +V
Sbjct: 137 RDLKAENLLLDADXNIKIADFGFSNEFTF--GNKLDAFCGAPPYAAPELFQGKKYDGPEV 194
Query: 685 DVYSYGVLLLEIIC 698
           DV+S GV+L  ++ 
Sbjct: 195 DVWSLGVILYTLVS 208

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 105/225 (46%), Gaps = 12/225 (5%)
Query: 478 PHQEDQGVSYMNLRCFTYKELVEV--TRGFKE---ELGRGAFGTVYKGFVNMGSSNHVAV 532
           P +E Q VS+   R    + +V+    R + +   ++G G+ G V    V   S   VAV
Sbjct: 2   PQREPQRVSHEQFRA-ALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVR-SSGKLVAV 59
Query: 533 KKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFG 592
           KK++   Q   +    EV  +    H+N+V +      G    +V EF+  G +   +  
Sbjct: 60  KKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVT 118
Query: 593 DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLL 652
            ++ N +    + + +   L  LH +    +IH DIK  +ILL      ++SDFG    +
Sbjct: 119 HTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQV 175
Query: 653 TLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEII 697
           + +       + GT  ++APE    +P   +VD++S G++++E++
Sbjct: 176 SKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 219

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 92/197 (46%), Gaps = 19/197 (9%)
Query: 506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV------FQDSEKEFKAEVNGIGQTHHK 559
           KEELG+GAF  V +  V+  +    A K +N+       FQ  E+E +       +  H 
Sbjct: 10  KEELGKGAFSVVRRC-VHKTTGLEFAAKIINTKKLSARDFQKLEREARI----CRKLQHP 64
Query: 560 NLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEEC 619
           N+VRL     E     LV++ ++ G +   +      +    +     I   + Y H   
Sbjct: 65  NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS-- 122
Query: 620 CTQIIHCDIKPQNILLDDHYNA---RISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR 676
              I+H ++KP+N+LL         +++DFGLA  + ++ S       GT GY++PE  +
Sbjct: 123 -NGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLK 179
Query: 677 NMPITVKVDVYSYGVLL 693
             P +  VD+++ GV+L
Sbjct: 180 KDPYSKPVDIWACGVIL 196

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 105/225 (46%), Gaps = 12/225 (5%)
Query: 478 PHQEDQGVSYMNLRCFTYKELVEV--TRGFKE---ELGRGAFGTVYKGFVNMGSSNHVAV 532
           P +E Q VS+   R    + +V+    R + +   ++G G+ G V    V   S   VAV
Sbjct: 124 PQREPQRVSHEQFRA-ALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVR-SSGKLVAV 181
Query: 533 KKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFG 592
           KK++   Q   +    EV  +    H+N+V +      G    +V EF+  G +   +  
Sbjct: 182 KKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVT 240
Query: 593 DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLL 652
            ++ N +    + + +   L  LH +    +IH DIK  +ILL      ++SDFG    +
Sbjct: 241 HTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQV 297
Query: 653 TLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEII 697
           + +       + GT  ++APE    +P   +VD++S G++++E++
Sbjct: 298 SKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 341

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 92/197 (46%), Gaps = 19/197 (9%)
Query: 506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV------FQDSEKEFKAEVNGIGQTHHK 559
           KEELG+GAF  V +  V+  +    A K +N+       FQ  E+E +       +  H 
Sbjct: 11  KEELGKGAFSVVRRC-VHKTTGLEFAAKIINTKKLSARDFQKLEREARI----CRKLQHP 65
Query: 560 NLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEEC 619
           N+VRL     E     LV++ ++ G +   +      +    +     I   + Y H   
Sbjct: 66  NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS-- 123
Query: 620 CTQIIHCDIKPQNILLDDHYNA---RISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR 676
              I+H ++KP+N+LL         +++DFGLA  + ++ S       GT GY++PE  +
Sbjct: 124 -NGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLK 180
Query: 677 NMPITVKVDVYSYGVLL 693
             P +  VD+++ GV+L
Sbjct: 181 KDPYSKPVDIWACGVIL 197

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 92/197 (46%), Gaps = 19/197 (9%)
Query: 506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV------FQDSEKEFKAEVNGIGQTHHK 559
           KEELG+GAF  V +  V+  +    A K +N+       FQ  E+E +       +  H 
Sbjct: 11  KEELGKGAFSVVRRC-VHKTTGLEFAAKIINTKKLSARDFQKLEREARI----CRKLQHP 65
Query: 560 NLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEEC 619
           N+VRL     E     LV++ ++ G +   +      +    +     I   + Y H   
Sbjct: 66  NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS-- 123
Query: 620 CTQIIHCDIKPQNILLDDHYNA---RISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR 676
              I+H ++KP+N+LL         +++DFGLA  + ++ S       GT GY++PE  +
Sbjct: 124 -NGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLK 180
Query: 677 NMPITVKVDVYSYGVLL 693
             P +  VD+++ GV+L
Sbjct: 181 KDPYSKPVDIWACGVIL 197

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-------AEVNGIGQTHHKN 560
           E+G GA+G V+K          VA+K++    Q  E+          A +  +    H N
Sbjct: 18  EIGEGAYGKVFKARDLKNGGRFVALKRVR--VQTGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 561 LVRLLGYC-----DEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLF 613
           +VRL   C     D      LV+E +    + ++L    +P     T  ++   +  GL 
Sbjct: 76  VVRLFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE 673
           +LH     +++H D+KPQNIL+      +++DFGLA++ +   + T+  +  T  Y APE
Sbjct: 135 FLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPE 189
Query: 674 WFRNMPITVKVDVYSYGVLLLEI 696
                     VD++S G +  E+
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEM 212

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-------AEVNGIGQTHHKN 560
           E+G GA+G V+K          VA+K++    Q  E+          A +  +    H N
Sbjct: 18  EIGEGAYGKVFKARDLKNGGRFVALKRVR--VQTGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 561 LVRLLGYC-----DEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLF 613
           +VRL   C     D      LV+E +    + ++L    +P     T  ++   +  GL 
Sbjct: 76  VVRLFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE 673
           +LH     +++H D+KPQNIL+      +++DFGLA++ +   + T+  +  T  Y APE
Sbjct: 135 FLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPE 189
Query: 674 WFRNMPITVKVDVYSYGVLLLEI 696
                     VD++S G +  E+
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEM 212

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 101/221 (45%), Gaps = 29/221 (13%)
Query: 490 LRCFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSN---HVAVKKL-NSVFQDSEKE 545
           LR     EL +V     + LG GAFGTVYKG       N    VA+K L  +    + KE
Sbjct: 11  LRILKETELRKV-----KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKE 65
Query: 546 FKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASF-------LFGDSKPNW 598
              E   +       + RLLG C     +L V + M  G +          L      NW
Sbjct: 66  ILDEAYVMAGVGSPYVSRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNW 124
Query: 599 KLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS- 657
                  M IA G+ YL +    +++H D+  +N+L+    + +I+DFGLA+LL +D++ 
Sbjct: 125 ------CMQIAKGMSYLED---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE 175
Query: 658 -HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEII 697
            H +      K ++A E       T + DV+SYGV + E++
Sbjct: 176 YHADGGKVPIK-WMALESILRRRFTHQSDVWSYGVTVWELM 215

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 94/218 (43%), Gaps = 32/218 (14%)
Query: 509 LGRGAFGTVYKGFV------NMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH----H 558
           LG GAFG V                  VAVK L S    +EK+    ++ +        H
Sbjct: 77  LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKS--DATEKDLSDLISEMEMMKMIGKH 134
Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNW----------------KLRT 602
           KN++ LLG C +     ++ E+ S G +  +L     P                  K   
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 603 EIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLDQSHTNT 661
             A  +A G+ YL  + C   IH D+  +N+L+ +    +I+DFGLA+ +  +D     T
Sbjct: 195 SCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 251
Query: 662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
             R    ++APE   +   T + DV+S+GVLL EI  L
Sbjct: 252 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL 289

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 22/203 (10%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-------AEVNGIGQTHHKN 560
           E+G GA+G V+K          VA+K++    Q  E+          A +  +    H N
Sbjct: 18  EIGEGAYGKVFKARDLKNGGRFVALKRVR--VQTGEEGMPLSTIREVAVLRHLETFEHPN 75
Query: 561 LVRLLGYC-----DEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLF 613
           +VRL   C     D      LV+E +    + ++L    +P     T  ++   +  GL 
Sbjct: 76  VVRLFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGVPTETIKDMMFQLLRGLD 134
Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE 673
           +LH     +++H D+KPQNIL+      +++DFGLA++ +   + T+  +  T  Y APE
Sbjct: 135 FLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWYRAPE 189
Query: 674 WFRNMPITVKVDVYSYGVLLLEI 696
                     VD++S G +  E+
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEM 212

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 104/223 (46%), Gaps = 37/223 (16%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E        E++ + + +H N+
Sbjct: 12  EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 67
Query: 562 VRLLGYCDEGQNRLLVYEFMS----NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+EF+S    +   AS L G   P   L       +  GL + H 
Sbjct: 68  VKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 124
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
               +++H D+KPQN+L++     +++DFGLA+            +R     V   W+R 
Sbjct: 125 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRA 174
Query: 678 MPI-------TVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
             I       +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 216

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 6/190 (3%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           ++G G+ G V    V   S   VAVKK++   Q   +    EV  +    H+N+V +   
Sbjct: 27  KIGEGSTGIVCIATVR-SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 85
Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCD 627
              G    +V EF+  G +   +   ++ N +    + + +   L  LH +    +IH D
Sbjct: 86  YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRD 141
Query: 628 IKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVY 687
           IK  +ILL      ++SDFG    ++ +       + GT  ++APE    +P   +VD++
Sbjct: 142 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIW 200
Query: 688 SYGVLLLEII 697
           S G++++E++
Sbjct: 201 SLGIMVIEMV 210

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 92/194 (47%), Gaps = 11/194 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           +G+G F  V K   ++ +   VAVK ++    +S   +K F+ EV  +   +H N+V+L 
Sbjct: 22  IGKGNFAKV-KLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLF 79
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
              +  +   LV E+ S G V  +L    +   K        I   + Y H++    I+H
Sbjct: 80  EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF---IVH 136
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT-VKV 684
            D+K +N+LLD   N +I+DFG +   T           G+  Y APE F+       +V
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPELFQGKKYDGPEV 194
Query: 685 DVYSYGVLLLEIIC 698
           DV+S GV+L  ++ 
Sbjct: 195 DVWSLGVILYTLVS 208

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 11/194 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYC 568
           LG+G +G VY G  ++ +   +A+K++        +    E+       HKN+V+ LG  
Sbjct: 30  LGKGTYGIVYAG-RDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 569 DEGQNRLLVYEFMSNGTVASFL---FGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
            E     +  E +  G++++ L   +G  K N +        I  GL YLH+    QI+H
Sbjct: 89  SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVH 145
Query: 626 CDIKPQNILLDDHYNA-RISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP--ITV 682
            DIK  N+L++ +    +ISDFG +K L      T T   GT  Y+APE     P     
Sbjct: 146 RDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET-FTGTLQYMAPEIIDKGPRGYGK 204
Query: 683 KVDVYSYGVLLLEI 696
             D++S G  ++E+
Sbjct: 205 AADIWSLGCTIIEM 218

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 104/223 (46%), Gaps = 37/223 (16%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E        E++ + + +H N+
Sbjct: 11  EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 66
Query: 562 VRLLGYCDEGQNRLLVYEFMS----NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+EF+S    +   AS L G   P   L       +  GL + H 
Sbjct: 67  VKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 123
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
               +++H D+KPQN+L++     +++DFGLA+            +R     V   W+R 
Sbjct: 124 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRA 173
Query: 678 MPI-------TVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
             I       +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 215

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 92/194 (47%), Gaps = 11/194 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           +G+G F  V K   ++ +   VAVK ++    +S   +K F+ EV  +   +H N+V+L 
Sbjct: 22  IGKGNFAKV-KLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLF 79
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
              +  +   LV E+ S G V  +L    +   K        I   + Y H++    I+H
Sbjct: 80  EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF---IVH 136
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT-VKV 684
            D+K +N+LLD   N +I+DFG +   T           G+  Y APE F+       +V
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPELFQGKKYDGPEV 194
Query: 685 DVYSYGVLLLEIIC 698
           DV+S GV+L  ++ 
Sbjct: 195 DVWSLGVILYTLVS 208

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 95/198 (47%), Gaps = 13/198 (6%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN--SVFQDSEKEFKAEVNGIGQTHHKNLV 562
           F  E+GRG+F TVYKG ++  ++  VA  +L    + +   + FK E   +    H N+V
Sbjct: 30  FDIEIGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIV 88
Query: 563 RLLGYCD---EGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
           R     +   +G+  + LV E  ++GT+ ++L        K+       I  GL +LH  
Sbjct: 89  RFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTR 148
Query: 619 CCTQIIHCDIKPQNILLDDHYNA-RISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
               IIH D+K  NI +     + +I D GLA   TL ++    A+ GT  + APE +  
Sbjct: 149 -TPPIIHRDLKCDNIFITGPTGSVKIGDLGLA---TLKRASFAKAVIGTPEFXAPEXYEE 204
Query: 678 MPITVKVDVYSYGVLLLE 695
                 VDVY++G   LE
Sbjct: 205 -KYDESVDVYAFGXCXLE 221

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 118/284 (41%), Gaps = 44/284 (15%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVR 563
            +E +G GA   V   +        VA+K++N    Q S  E   E+  + Q HH N+V 
Sbjct: 19  LQEVIGSGATAVVQAAYC-APKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVS 77
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLF-----GDSKPNWKLRTEIAM---GIAGGLFYL 615
                       LV + +S G+V   +      G+ K      + IA     +  GL YL
Sbjct: 78  YYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL 137
Query: 616 HEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR----GTKGYVA 671
           H+      IH D+K  NILL +  + +I+DFG++  L      T   +R    GT  ++A
Sbjct: 138 HKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA 194
Query: 672 PEWFRNMP-ITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQE-RTLE 729
           PE    +     K D++S+G+  +E+                       Y +Y   + L 
Sbjct: 195 PEVMEQVRGYDFKADIWSFGITAIELAT-----------------GAAPYHKYPPMKVLM 237
Query: 730 ALVEND---LE-AMNNVTMLHR----FVMVAFWCIQEDPSHRPT 765
             ++ND   LE  + +  ML +    F  +   C+Q+DP  RPT
Sbjct: 238 LTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 281

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 92/197 (46%), Gaps = 19/197 (9%)
Query: 506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV------FQDSEKEFKAEVNGIGQTHHK 559
           KEELG+GAF  V +  V+  +    A K +N+       FQ  E+E +       +  H 
Sbjct: 34  KEELGKGAFSVVRR-CVHKTTGLEFAAKIINTKKLSARDFQKLEREARI----CRKLQHP 88
Query: 560 NLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEEC 619
           N+VRL     E     LV++ ++ G +   +      +    +     I   + Y H   
Sbjct: 89  NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH--- 145
Query: 620 CTQIIHCDIKPQNILLDDHYNA---RISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR 676
              I+H ++KP+N+LL         +++DFGLA  + ++ S       GT GY++PE  +
Sbjct: 146 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVLK 203
Query: 677 NMPITVKVDVYSYGVLL 693
             P +  VD+++ GV+L
Sbjct: 204 KDPYSKPVDIWACGVIL 220

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 104/246 (42%), Gaps = 37/246 (15%)
Query: 468 LVVNRKKFMRPHQEDQGVSYMNLRCFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSS 527
           + +N   ++R  +   G SY  +R                +LG GA+G V       G S
Sbjct: 19  IAINPGMYVRKKEGKIGESYFKVR----------------KLGSGAYGEVLLCKEKNGHS 62
Query: 528 NHV--AVKKL----------NSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRL 575
                 +KK           N   +   +E   E++ +    H N+++L    ++ +   
Sbjct: 63  EKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFY 122
Query: 576 LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILL 635
           LV EF   G +   +    K +      I   I  G+ YLH+     I+H DIKP+NILL
Sbjct: 123 LVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILL 179
Query: 636 DDH---YNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVL 692
           ++     N +I DFGL+   + D    +    GT  Y+APE  +      K DV+S GV+
Sbjct: 180 ENKNSLLNIKIVDFGLSSFFSKDYKLRDRL--GTAYYIAPEVLKK-KYNEKCDVWSCGVI 236
Query: 693 LLEIIC 698
           +  ++C
Sbjct: 237 MYILLC 242

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 118/284 (41%), Gaps = 44/284 (15%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVR 563
            +E +G GA   V   +        VA+K++N    Q S  E   E+  + Q HH N+V 
Sbjct: 14  LQEVIGSGATAVVQAAYC-APKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVS 72
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLF-----GDSKPNWKLRTEIAM---GIAGGLFYL 615
                       LV + +S G+V   +      G+ K      + IA     +  GL YL
Sbjct: 73  YYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL 132
Query: 616 HEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR----GTKGYVA 671
           H+      IH D+K  NILL +  + +I+DFG++  L      T   +R    GT  ++A
Sbjct: 133 HKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA 189
Query: 672 PEWFRNMP-ITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQE-RTLE 729
           PE    +     K D++S+G+  +E+                       Y +Y   + L 
Sbjct: 190 PEVMEQVRGYDFKADIWSFGITAIELAT-----------------GAAPYHKYPPMKVLM 232
Query: 730 ALVEND---LE-AMNNVTMLHR----FVMVAFWCIQEDPSHRPT 765
             ++ND   LE  + +  ML +    F  +   C+Q+DP  RPT
Sbjct: 233 LTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 276

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 20/203 (9%)
Query: 508 ELGRGAFGTVYKG-------FVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKN 560
           E+G GA+GTVYK        FV + S               S     A +  +    H N
Sbjct: 16  EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPN 75
Query: 561 LVRLLGYC-----DEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLF 613
           +VRL+  C     D      LV+E +    + ++L     P     T  ++      GL 
Sbjct: 76  VVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDKAPPPGLPAETIKDLMRQFLRGLD 134
Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE 673
           +LH  C   I+H D+KP+NIL+      +++DFGLA++ +   + T   +  T  Y APE
Sbjct: 135 FLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVV--TLWYRAPE 189
Query: 674 WFRNMPITVKVDVYSYGVLLLEI 696
                     VD++S G +  E+
Sbjct: 190 VLLQSTYATPVDMWSVGCIFAEM 212

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 105/225 (46%), Gaps = 12/225 (5%)
Query: 478 PHQEDQGVSYMNLRCFTYKELVEV--TRGFKE---ELGRGAFGTVYKGFVNMGSSNHVAV 532
           P +E Q VS+   R    + +V+    R + +   ++G G+ G V    V   S   VAV
Sbjct: 47  PQREPQRVSHEQFRA-ALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVR-SSGKLVAV 104
Query: 533 KKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFG 592
           KK++   Q   +    EV  +    H+N+V +      G    +V EF+  G +   +  
Sbjct: 105 KKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVT 163
Query: 593 DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLL 652
            ++ N +    + + +   L  LH +    +IH DIK  +ILL      ++SDFG    +
Sbjct: 164 HTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQV 220
Query: 653 TLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEII 697
           + +       + GT  ++APE    +P   +VD++S G++++E++
Sbjct: 221 SKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 264

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 11/196 (5%)
Query: 506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           + ELGRGA   VY+     G+    A+K L       +K  + E+  + +  H N+++L 
Sbjct: 58  ESELGRGATSIVYRC-KQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLK 114
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
              +      LV E ++ G +   +      + +   +    I   + YLHE     I+H
Sbjct: 115 EIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHE---NGIVH 171
Query: 626 CDIKPQNILLDD---HYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            D+KP+N+L          +I+DFGL+K++  +       + GT GY APE  R      
Sbjct: 172 RDLKPENLLYATPAPDAPLKIADFGLSKIV--EHQVLMKTVCGTPGYCAPEILRGCAYGP 229
Query: 683 KVDVYSYGVLLLEIIC 698
           +VD++S G++   ++C
Sbjct: 230 EVDMWSVGIITYILLC 245

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 66.2 bits (160), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 6/190 (3%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           ++G G+ G V    V   S   VAVKK++   Q   +    EV  +    H+N+V +   
Sbjct: 31  KIGEGSTGIVCIATVR-SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNS 89
Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCD 627
              G    +V EF+  G +   +   ++ N +    + + +   L  LH +    +IH D
Sbjct: 90  YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRD 145
Query: 628 IKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVY 687
           IK  +ILL      ++SDFG    ++ +       + GT  ++APE    +P   +VD++
Sbjct: 146 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEVDIW 204
Query: 688 SYGVLLLEII 697
           S G++++E++
Sbjct: 205 SLGIMVIEMV 214

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 509 LGRGAFGTVYKGFV------NMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH----H 558
           LG G FG V               +  VAVK L      +EK+    V+ +        H
Sbjct: 89  LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD--DATEKDLSDLVSEMEMMKMIGKH 146
Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI-------------- 604
           KN++ LLG C +     ++ E+ S G +  +L     P  +   +I              
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206
Query: 605 --AMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLDQSHTNT 661
                +A G+ YL  + C   IH D+  +N+L+ ++   +I+DFGLA+ +  +D     T
Sbjct: 207 SCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 263
Query: 662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
             R    ++APE   +   T + DV+S+GVL+ EI  L
Sbjct: 264 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 301

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 41/221 (18%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYC 568
           LG+GAFG V K   N   S + A+KK+    ++      +EV  +   +H+ +VR     
Sbjct: 14  LGQGAFGQVVKA-RNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAW 71
Query: 569 DEGQN-------------RLLVYEFMSNGTVASFLFGDS-----KPNWKLRTEIAMGIAG 610
            E +N               +  E+  N T+   +  ++        W+L  +I   ++ 
Sbjct: 72  LERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALS- 130
Query: 611 GLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-------LLTLD------QS 657
              Y+H +    IIH D+KP NI +D+  N +I DFGLAK       +L LD       S
Sbjct: 131 ---YIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 658 HTNTAIRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEII 697
              T+  GT  YVA E          K+D+YS G++  E+I
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 27/218 (12%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E        E++ + + +H N+
Sbjct: 9   EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 64
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV----ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+EF+         AS L G   P   L       +  GL + H 
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 121
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD-QSHTNTAIRGTKGYVAPEWFR 676
               +++H D+KPQN+L++     +++DFGLA+   +  +++T+  +  T  Y APE   
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 176
Query: 677 NMP-ITVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
                +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 177 GXKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 213

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 27/218 (12%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E        E++ + + +H N+
Sbjct: 16  EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 71
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV----ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+EF+         AS L G   P   L       +  GL + H 
Sbjct: 72  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 128
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD-QSHTNTAIRGTKGYVAPEWFR 676
               +++H D+KPQN+L++     +++DFGLA+   +  +++T+  +  T  Y APE   
Sbjct: 129 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 183
Query: 677 NMP-ITVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
                +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 184 GXKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 220

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 11/194 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYC 568
           LG+G +G VY G  ++ +   +A+K++        +    E+       HKN+V+ LG  
Sbjct: 16  LGKGTYGIVYAG-RDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 569 DEGQNRLLVYEFMSNGTVASFL---FGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
            E     +  E +  G++++ L   +G  K N +        I  GL YLH+    QI+H
Sbjct: 75  SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVH 131
Query: 626 CDIKPQNILLDDHYNA-RISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP--ITV 682
            DIK  N+L++ +    +ISDFG +K L      T T   GT  Y+APE     P     
Sbjct: 132 RDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET-FTGTLQYMAPEIIDKGPRGYGK 190
Query: 683 KVDVYSYGVLLLEI 696
             D++S G  ++E+
Sbjct: 191 AADIWSLGCTIIEM 204

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 27/218 (12%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E        E++ + + +H N+
Sbjct: 8   EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 63
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV----ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+EF+         AS L G   P   L       +  GL + H 
Sbjct: 64  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 120
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD-QSHTNTAIRGTKGYVAPEWFR 676
               +++H D+KPQN+L++     +++DFGLA+   +  +++T+  +  T  Y APE   
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 175
Query: 677 NMP-ITVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
                +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 212

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 509 LGRGAFGTVYKGFV------NMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH----H 558
           LG G FG V               +  VAVK L      +EK+    V+ +        H
Sbjct: 30  LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD--DATEKDLSDLVSEMEMMKMIGKH 87
Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI-------------- 604
           KN++ LLG C +     ++ E+ S G +  +L     P  +   +I              
Sbjct: 88  KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 147
Query: 605 --AMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLDQSHTNT 661
                +A G+ YL  + C   IH D+  +N+L+ ++   +I+DFGLA+ +  +D     T
Sbjct: 148 SCTYQLARGMEYLASQKC---IHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTT 204
Query: 662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
             R    ++APE   +   T + DV+S+GVL+ EI  L
Sbjct: 205 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 242

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 11/194 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           +G+G F  V K   ++ +   VAV+ ++    +S   +K F+ EV  +   +H N+V+L 
Sbjct: 22  IGKGNFAKV-KLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLF 79
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
              +  +   LV E+ S G V  +L    +   K        I   + Y H++    I+H
Sbjct: 80  EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF---IVH 136
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT-VKV 684
            D+K +N+LLD   N +I+DFG +   T           G+  Y APE F+       +V
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPELFQGKKYDGPEV 194
Query: 685 DVYSYGVLLLEIIC 698
           DV+S GV+L  ++ 
Sbjct: 195 DVWSLGVILYTLVS 208

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 509 LGRGAFGTVYKGFV------NMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH----H 558
           LG G FG V               +  VAVK L      +EK+    V+ +        H
Sbjct: 32  LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD--DATEKDLSDLVSEMEMMKMIGKH 89
Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI-------------- 604
           KN++ LLG C +     ++ E+ S G +  +L     P  +   +I              
Sbjct: 90  KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 149
Query: 605 --AMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLDQSHTNT 661
                +A G+ YL  + C   IH D+  +N+L+ ++   +I+DFGLA+ +  +D     T
Sbjct: 150 SCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 206
Query: 662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
             R    ++APE   +   T + DV+S+GVL+ EI  L
Sbjct: 207 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 244

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 7/197 (3%)
Query: 505 FKEELGRGAFGTVYKGFVN-MGSSNHVAVKKLNSVFQDSEKE-FKAEVNGIGQTHHKNLV 562
           F   LG+G+FG V    V   G    V V K + + QD + E    E   +    +   +
Sbjct: 27  FIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFL 86
Query: 563 RLLGYCDEGQNRLL-VYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
             L  C +  +RL  V EF++ G +   +    + +       A  I   L +LH++   
Sbjct: 87  TQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDK--- 143
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT 681
            II+ D+K  N+LLD   + +++DFG+ K    +   T T   GT  Y+APE  + M   
Sbjct: 144 GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFC-GTPDYIAPEILQEMLYG 202
Query: 682 VKVDVYSYGVLLLEIIC 698
             VD ++ GVLL E++C
Sbjct: 203 PAVDWWAMGVLLYEMLC 219

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 509 LGRGAFGTVYKGFV------NMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH----H 558
           LG G FG V               +  VAVK L      +EK+    V+ +        H
Sbjct: 35  LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD--DATEKDLSDLVSEMEMMKMIGKH 92
Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI-------------- 604
           KN++ LLG C +     ++ E+ S G +  +L     P  +   +I              
Sbjct: 93  KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 152
Query: 605 --AMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLL-TLDQSHTNT 661
                +A G+ YL  + C   IH D+  +N+L+ ++   +I+DFGLA+ +  +D     T
Sbjct: 153 SCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 209
Query: 662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
             R    ++APE   +   T + DV+S+GVL+ EI  L
Sbjct: 210 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 247

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 27/218 (12%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E        E++ + + +H N+
Sbjct: 16  EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 71
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV----ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+EF+         AS L G   P   L       +  GL + H 
Sbjct: 72  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 128
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD-QSHTNTAIRGTKGYVAPEWFR 676
               +++H D+KPQN+L++     +++DFGLA+   +  +++T+  +  T  Y APE   
Sbjct: 129 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 183
Query: 677 NMP-ITVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
                +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 184 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 220

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 27/218 (12%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E        E++ + + +H N+
Sbjct: 9   EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 64
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV----ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+EF+         AS L G   P   L       +  GL + H 
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 121
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD-QSHTNTAIRGTKGYVAPEWFR 676
               +++H D+KPQN+L++     +++DFGLA+   +  +++T+  +  T  Y APE   
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 176
Query: 677 NMP-ITVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
                +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 213

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 11/194 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           +G+G F  V K   ++ +   VAV+ ++    +S   +K F+ EV  +   +H N+V+L 
Sbjct: 22  IGKGNFAKV-KLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLF 79
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
              +  +   LV E+ S G V  +L    +   K        I   + Y H++    I+H
Sbjct: 80  EVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF---IVH 136
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT-VKV 684
            D+K +N+LLD   N +I+DFG +   T           G+  Y APE F+       +V
Sbjct: 137 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFC--GSPPYAAPELFQGKKYDGPEV 194
Query: 685 DVYSYGVLLLEIIC 698
           DV+S GV+L  ++ 
Sbjct: 195 DVWSLGVILYTLVS 208

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 27/218 (12%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E        E++ + + +H N+
Sbjct: 8   EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 63
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV----ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+EF+         AS L G   P   L       +  GL + H 
Sbjct: 64  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 120
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD-QSHTNTAIRGTKGYVAPEWFR 676
               +++H D+KPQN+L++     +++DFGLA+   +  +++T+  +  T  Y APE   
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 175
Query: 677 NMP-ITVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
                +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 212

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 27/218 (12%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E        E++ + + +H N+
Sbjct: 10  EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 65
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV----ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+EF+         AS L G   P   L       +  GL + H 
Sbjct: 66  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 122
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD-QSHTNTAIRGTKGYVAPEWFR 676
               +++H D+KPQN+L++     +++DFGLA+   +  +++T+  +  T  Y APE   
Sbjct: 123 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 177
Query: 677 NMP-ITVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
                +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 214

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 27/218 (12%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E        E++ + + +H N+
Sbjct: 9   EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 64
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV----ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+EF+         AS L G   P   L       +  GL + H 
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 121
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD-QSHTNTAIRGTKGYVAPEWFR 676
               +++H D+KPQN+L++     +++DFGLA+   +  +++T+  +  T  Y APE   
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 176
Query: 677 NMP-ITVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
                +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 213

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 130/285 (45%), Gaps = 44/285 (15%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           E +G G FG V+K    +    +V +K++    + +E+E KA    + +  H N+V   G
Sbjct: 17  ELIGSGGFGQVFKAKHRIDGKTYV-IKRVKYNNEKAEREVKA----LAKLDHVNIVHYNG 71
Query: 567 ------YCDEGQNR----------LLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM---- 606
                 Y  E  ++           +  EF   GT+  ++  + +   KL   +A+    
Sbjct: 72  CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI--EKRRGEKLDKVLALELFE 129
Query: 607 GIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGT 666
            I  G+ Y+H +   ++I+ D+KP NI L D    +I DFGL   L  D     +  +GT
Sbjct: 130 QITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS--KGT 184
Query: 667 KGYVAPEWFRNMPITVKVDVYSYGVLLLEI--ICLRRNIDNEISK----VDKAILTDWAY 720
             Y++PE   +     +VD+Y+ G++L E+  +C   +   E SK    +   I++D  +
Sbjct: 185 LRYMSPEQISSQDYGKEVDLYALGLILAELLHVC---DTAFETSKFFTDLRDGIISD-IF 240
Query: 721 DRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPT 765
           D+ ++  L+ L+    E   N + + R + V  W    + + R T
Sbjct: 241 DKKEKTLLQKLLSKKPEDRPNTSEILRTLTV--WKKSPEKNERHT 283

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 27/218 (12%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E        E++ + + +H N+
Sbjct: 9   EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 64
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV----ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+EF+         AS L G   P   L       +  GL + H 
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLSFCHS 121
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD-QSHTNTAIRGTKGYVAPEWFR 676
               +++H D+KPQN+L++     +++DFGLA+   +  +++T+  +  T  Y APE   
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 176
Query: 677 NMP-ITVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
                +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 213

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 27/218 (12%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E        E++ + + +H N+
Sbjct: 13  EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 68
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV----ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+EF+         AS L G   P   L       +  GL + H 
Sbjct: 69  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 125
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD-QSHTNTAIRGTKGYVAPEWFR 676
               +++H D+KPQN+L++     +++DFGLA+   +  +++T+  +  T  Y APE   
Sbjct: 126 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 180
Query: 677 NMP-ITVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
                +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 217

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 509 LGRGAFGTVYKGFV------NMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH----H 558
           LG GAFG V               +  VAVK L      +EK+    V+ +        H
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD--DATEKDLSDLVSEMEMMKMIGKH 100
Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI-------------- 604
           KN++ LLG C +     ++  + S G +  +L     P  +   +I              
Sbjct: 101 KNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 605 --AMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLDQSHTNT 661
                +A G+ YL  + C   IH D+  +N+L+ ++   +I+DFGLA+ +  +D     T
Sbjct: 161 SCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
             R    ++APE   +   T + DV+S+GVL+ EI  L
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 93/197 (47%), Gaps = 9/197 (4%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLV 562
            ++ +G+G F  V K   ++ +   VAVK ++    +  S ++   EV  +   +H N+V
Sbjct: 19  LQKTIGKGNFAKV-KLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIV 77
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           +L    +  +   LV E+ S G V  +L    +   K        I   + Y H++    
Sbjct: 78  KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKY--- 134
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT- 681
           I+H D+K +N+LLD   N +I+DFG +   T+          G+  Y APE F+      
Sbjct: 135 IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFC--GSPPYAAPELFQGKKYDG 192
Query: 682 VKVDVYSYGVLLLEIIC 698
            +VDV+S GV+L  ++ 
Sbjct: 193 PEVDVWSLGVILYTLVS 209

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 37/223 (16%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E        E++ + + +H N+
Sbjct: 9   EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 64
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV----ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+EF+         AS L G   P   L       +  GL + H 
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 121
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
               +++H D+KPQN+L++     +++DFGLA+            +R     V   W+R 
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRA 171
Query: 678 MPI-------TVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
             I       +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 213

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 96/198 (48%), Gaps = 19/198 (9%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   +  +   N VA+KKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 32  IGSGAQGIVVAAYDAILERN-VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLN 90
Query: 567 Y------CDEGQNRLLVYEFM-SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEEC 619
                   +E Q+  +V E M +N +    +  D +    L  ++ +GI     +LH   
Sbjct: 91  VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIK----HLH--- 143
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP 679
              IIH D+KP NI++      +I DFGLA+  T   S   T    T+ Y APE    M 
Sbjct: 144 SAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 680 ITVKVDVYSYGVLLLEII 697
               VD++S GV++ E+I
Sbjct: 202 YKENVDIWSVGVIMGEMI 219

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 37/223 (16%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E        E++ + + +H N+
Sbjct: 9   EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 64
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV----ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+EF+         AS L G   P   L       +  GL + H 
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 121
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
               +++H D+KPQN+L++     +++DFGLA+            +R     V   W+R 
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRA 171
Query: 678 MPI-------TVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
             I       +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 213

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 37/223 (16%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE-----FKAEVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E        E++ + + +H N+
Sbjct: 9   EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 64
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV----ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+EF+         AS L G   P   L       +  GL + H 
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 121
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
               +++H D+KPQN+L++     +++DFGLA+            +R     V   W+R 
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRA 171
Query: 678 MPI-------TVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
             I       +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 213

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 9/192 (4%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G+G F  V K   ++ +   VA+K ++    +  S ++   EV  +   +H N+V+L  
Sbjct: 23  IGKGNFAKV-KLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 81
Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHC 626
             +  +   L+ E+ S G V  +L    +   K        I   + Y H++   +I+H 
Sbjct: 82  VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK---RIVHR 138
Query: 627 DIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT-VKVD 685
           D+K +N+LLD   N +I+DFG +   T+       A  G   Y APE F+       +VD
Sbjct: 139 DLKAENLLLDADMNIKIADFGFSNEFTV--GGKLDAFCGAPPYAAPELFQGKKYDGPEVD 196
Query: 686 VYSYGVLLLEII 697
           V+S GV+L  ++
Sbjct: 197 VWSLGVILYTLV 208

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 37/223 (16%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E        E++ + + +H N+
Sbjct: 11  EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 66
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV----ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+EF+         AS L G   P   L       +  GL + H 
Sbjct: 67  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 123
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
               +++H D+KPQN+L++     +++DFGLA+            +R     V   W+R 
Sbjct: 124 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRA 173
Query: 678 MPI-------TVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
             I       +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 215

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 37/223 (16%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E        E++ + + +H N+
Sbjct: 12  EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 67
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV----ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+EF+         AS L G   P   L       +  GL + H 
Sbjct: 68  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 124
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
               +++H D+KPQN+L++     +++DFGLA+            +R     V   W+R 
Sbjct: 125 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRA 174
Query: 678 MPI-------TVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
             I       +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 216

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 37/223 (16%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E        E++ + + +H N+
Sbjct: 11  EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 66
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV----ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+EF+         AS L G   P   L       +  GL + H 
Sbjct: 67  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 123
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
               +++H D+KPQN+L++     +++DFGLA+            +R     V   W+R 
Sbjct: 124 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRA 173
Query: 678 MPI-------TVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
             I       +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 215

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 37/223 (16%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E        E++ + + +H N+
Sbjct: 8   EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 63
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV----ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+EF+         AS L G   P   L       +  GL + H 
Sbjct: 64  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 120
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
               +++H D+KPQN+L++     +++DFGLA+            +R     V   W+R 
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRA 170
Query: 678 MPI-------TVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
             I       +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 212

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 37/223 (16%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E        E++ + + +H N+
Sbjct: 10  EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 65
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV----ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+EF+         AS L G   P   L       +  GL + H 
Sbjct: 66  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 122
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
               +++H D+KPQN+L++     +++DFGLA+            +R     V   W+R 
Sbjct: 123 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRA 172
Query: 678 MPI-------TVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
             I       +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 214

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 37/223 (16%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE-----FKAEVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E        E++ + + +H N+
Sbjct: 9   EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 64
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV----ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+EF+         AS L G   P   L       +  GL + H 
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 121
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
               +++H D+KPQN+L++     +++DFGLA+            +R     V   W+R 
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRA 171
Query: 678 MPI-------TVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
             I       +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 213

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 37/223 (16%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E        E++ + + +H N+
Sbjct: 12  EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 67
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV----ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+EF+         AS L G   P   L       +  GL + H 
Sbjct: 68  VKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 124
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
               +++H D+KPQN+L++     +++DFGLA+            +R     V   W+R 
Sbjct: 125 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRA 174
Query: 678 MPI-------TVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
             I       +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 216

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 37/223 (16%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E        E++ + + +H N+
Sbjct: 13  EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 68
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV----ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+EF+         AS L G   P   L       +  GL + H 
Sbjct: 69  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 125
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
               +++H D+KPQN+L++     +++DFGLA+            +R     V   W+R 
Sbjct: 126 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRA 175
Query: 678 MPI-------TVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
             I       +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 217

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 37/223 (16%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E        E++ + + +H N+
Sbjct: 8   EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 63
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV----ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+EF+         AS L G   P   L       +  GL + H 
Sbjct: 64  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 120
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
               +++H D+KPQN+L++     +++DFGLA+            +R     V   W+R 
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRA 170
Query: 678 MPI-------TVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
             I       +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 212

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 37/223 (16%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E        E++ + + +H N+
Sbjct: 12  EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 67
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV----ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+EF+         AS L G   P   L       +  GL + H 
Sbjct: 68  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 124
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
               +++H D+KPQN+L++     +++DFGLA+            +R     V   W+R 
Sbjct: 125 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRA 174
Query: 678 MPI-------TVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
             I       +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 216

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 37/223 (16%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E        E++ + + +H N+
Sbjct: 12  EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 67
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV----ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+EF+S        AS L G   P   L       +  GL + H 
Sbjct: 68  VKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 124
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
               +++H D+KP+N+L++     +++DFGLA+            +R     V   W+R 
Sbjct: 125 H---RVLHRDLKPENLLINTEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRA 174
Query: 678 MPI-------TVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
             I       +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 216

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 37/223 (16%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E        E++ + + +H N+
Sbjct: 10  EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 65
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV----ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+EF+S        AS L G   P   L       +  GL + H 
Sbjct: 66  VKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 122
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
               +++H D+KP+N+L++     +++DFGLA+            +R     V   W+R 
Sbjct: 123 H---RVLHRDLKPENLLINTEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRA 172
Query: 678 MPI-------TVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
             I       +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 214

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 37/223 (16%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E        E++ + + +H N+
Sbjct: 10  EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 65
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV----ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+EF+         AS L G   P   L       +  GL + H 
Sbjct: 66  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 122
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
               +++H D+KPQN+L++     +++DFGLA+            +R     V   W+R 
Sbjct: 123 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRA 172
Query: 678 MPI-------TVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
             I       +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 214

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 20/200 (10%)
Query: 509 LGRGAFGTVYKG-FVNMGSSNH--VAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG GAFGTVYKG ++  G      VA+K+L  +    + KE   E   +    + ++ RL
Sbjct: 24  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQ 622
           LG C     +L++ + M  G +  ++  + K N   +  +   + IA G+ YL +    +
Sbjct: 84  LGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR---R 138
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           ++H D+  +N+L+    + +I+DFGLAKLL  ++   +       G V  +W     I  
Sbjct: 139 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVPIKWMALESILH 194
Query: 683 KV-----DVYSYGVLLLEII 697
           ++     DV+SYGV + E++
Sbjct: 195 RIYTHQSDVWSYGVTVWELM 214

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 509 LGRGAFGTVYKGFV------NMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH----H 558
           LG GAFG V               +  VAVK L      +EK+    V+ +        H
Sbjct: 43  LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD--DATEKDLSDLVSEMEMMKMIGKH 100
Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI-------------- 604
           KN++ LLG C +     ++  + S G +  +L     P  +   +I              
Sbjct: 101 KNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 605 --AMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-LLTLDQSHTNT 661
                +A G+ YL  + C   IH D+  +N+L+ ++   +I+DFGLA+ +  +D     T
Sbjct: 161 SCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
             R    ++APE   +   T + DV+S+GVL+ EI  L
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL 255

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 103/198 (52%), Gaps = 16/198 (8%)
Query: 509 LGRGAFGTVYKG-FVNMGSSNH--VAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG GAFGTVYKG ++  G      VA+K+L  +    + KE   E   +    + ++ RL
Sbjct: 24  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQ 622
           LG C     +L++ + M  G +  ++  + K N   +  +   + IA G+ YL +    +
Sbjct: 84  LGICLTSTVQLIM-QLMPFGXLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR---R 138
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMP 679
           ++H D+  +N+L+    + +I+DFGLAKLL  ++   +    G K    ++A E   +  
Sbjct: 139 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALESILHRI 196
Query: 680 ITVKVDVYSYGVLLLEII 697
            T + DV+SYGV + E++
Sbjct: 197 YTHQSDVWSYGVTVWELM 214

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 90/201 (44%), Gaps = 19/201 (9%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-----FQDSEKEFKAEVNGIGQTHHKNLV 562
           E+G GA+GTVYK   +  S + VA+K +           S     A +  +    H N+V
Sbjct: 11  EIGVGAYGTVYKA-RDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVV 69
Query: 563 RLLGYC-----DEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYL 615
           RL+  C     D      LV+E +    + ++L     P     T  ++      GL +L
Sbjct: 70  RLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL 128
Query: 616 HEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF 675
           H  C   I+H D+KP+NIL+      +++DFGLA++ +   +     +  T  Y APE  
Sbjct: 129 HANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV--TLWYRAPEVL 183
Query: 676 RNMPITVKVDVYSYGVLLLEI 696
                   VD++S G +  E+
Sbjct: 184 LQSTYATPVDMWSVGCIFAEM 204

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 21/200 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE-----FKAEVNGIGQTHHKNLVR 563
           LG G F TVYK   +  ++  VA+KK+    +   K+        E+  + +  H N++ 
Sbjct: 18  LGEGQFATVYKA-RDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 76
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSK----PNWKLRTEIAMGIAGGLFYLHEEC 619
           LL       N  LV++FM   T    +  D+     P+  ++  + M + G L YLH+  
Sbjct: 77  LLDAFGHKSNISLVFDFME--TDLEVIIKDNSLVLTPS-HIKAYMLMTLQG-LEYLHQHW 132
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLL-TLDQSHTNTAIRGTKGYVAPE-WFRN 677
              I+H D+KP N+LLD++   +++DFGLAK   + ++++ +  +  T+ Y APE  F  
Sbjct: 133 ---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV--TRWYRAPELLFGA 187
Query: 678 MPITVKVDVYSYGVLLLEII 697
               V VD+++ G +L E++
Sbjct: 188 RMYGVGVDMWAVGCILAELL 207

>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 122/292 (41%), Gaps = 36/292 (12%)
Query: 505 FKEELGRGAFGTVYKGF------VNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHH 558
           F E LG+G F  ++KG               V +K L+   ++  + F    + + +  H
Sbjct: 12  FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDS---KPNWKLRTEIAMGIAGGLFYL 615
           K+LV   G C  G   +LV EF+  G++ ++L  +       WKL  E+A  +A  + +L
Sbjct: 72  KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKL--EVAKQLAAAMHFL 129
Query: 616 HEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT---NTAIRGTKGYVAP 672
            E     +IH ++  +NILL    + +  +    KL     S T      ++    +V P
Sbjct: 130 EE---NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPP 186
Query: 673 EWFRNMP-ITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEAL 731
           E   N   + +  D +S+G  L EI       D  +S +D      +  DR+Q    +A 
Sbjct: 187 ECIENPKNLNLATDKWSFGTTLWEICS---GGDKPLSALDSQRKLQFYEDRHQLPAPKAA 243
Query: 732 VENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPIPP 783
              +L  +NN             C+  +P HRP+ R + + L  +    + P
Sbjct: 244 ELANL--INN-------------CMDYEPDHRPSFRAIIRDLNSLFTPDLVP 280

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 103/198 (52%), Gaps = 16/198 (8%)
Query: 509 LGRGAFGTVYKG-FVNMGSSNH--VAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG GAFGTVYKG ++  G      VA+K+L  +    + KE   E   +    + ++ RL
Sbjct: 26  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQ 622
           LG C     +L++ + M  G +  ++  + K N   +  +   + IA G+ YL +    +
Sbjct: 86  LGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR---R 140
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMP 679
           ++H D+  +N+L+    + +I+DFGLAKLL  ++   +    G K    ++A E   +  
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALESILHRI 198
Query: 680 ITVKVDVYSYGVLLLEII 697
            T + DV+SYGV + E++
Sbjct: 199 YTHQSDVWSYGVTVWELM 216

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  + + VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 26  VGSGAYGSVCAAF-DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 85  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQF-----LIYQILRGLKYIH- 138
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 139 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 186
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 20/200 (10%)
Query: 509 LGRGAFGTVYKG-FVNMGSSNH--VAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG GAFGTVYKG ++  G      VA+K+L  +    + KE   E   +    + ++ RL
Sbjct: 25  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQ 622
           LG C     +L++ + M  G +  ++  + K N   +  +   + IA G+ YL +    +
Sbjct: 85  LGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR---R 139
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           ++H D+  +N+L+    + +I+DFGLAKLL  ++   +       G V  +W     I  
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVPIKWMALESILH 195
Query: 683 KV-----DVYSYGVLLLEII 697
           ++     DV+SYGV + E++
Sbjct: 196 RIYTHQSDVWSYGVTVWELM 215

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 103/198 (52%), Gaps = 16/198 (8%)
Query: 509 LGRGAFGTVYKG-FVNMGSSNH--VAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG GAFGTVYKG ++  G      VA+K+L  +    + KE   E   +    + ++ RL
Sbjct: 23  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQ 622
           LG C     +L++ + M  G +  ++  + K N   +  +   + IA G+ YL +    +
Sbjct: 83  LGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR---R 137
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMP 679
           ++H D+  +N+L+    + +I+DFGLAKLL  ++   +    G K    ++A E   +  
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALESILHRI 195
Query: 680 ITVKVDVYSYGVLLLEII 697
            T + DV+SYGV + E++
Sbjct: 196 YTHQSDVWSYGVTVWELM 213

>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 100/218 (45%), Gaps = 36/218 (16%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE-FKAEVN--GIGQTHHKNLVR 563
           E +GRG +G VYKG ++      VAVK    VF  + ++ F  E N   +    H N+ R
Sbjct: 19  ELIGRGRYGAVYKGSLD---ERPVAVK----VFSFANRQNFINEKNIYRVPLMEHDNIAR 71
Query: 564 LLG-----YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
            +        D     LLV E+  NG++  +L   +  +W     +A  +  GL YLH E
Sbjct: 72  FIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-DWVSSCRLAHSVTRGLAYLHTE 130
Query: 619 CCT------QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ-----SHTNTAIR--G 665
                     I H D+  +N+L+ +     ISDFGL+  LT ++        N AI   G
Sbjct: 131 LPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVG 190
Query: 666 TKGYVAPEW------FRNMPITVK-VDVYSYGVLLLEI 696
           T  Y+APE        R+    +K VD+Y+ G++  EI
Sbjct: 191 TIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  + + VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 30  VGSGAYGSVCAAF-DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 142
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 190
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 103/198 (52%), Gaps = 16/198 (8%)
Query: 509 LGRGAFGTVYKG-FVNMGSSNH--VAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG GAFGTVYKG ++  G      VA+K+L  +    + KE   E   +    + ++ RL
Sbjct: 27  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQ 622
           LG C     +L++ + M  G +  ++  + K N   +  +   + IA G+ YL +    +
Sbjct: 87  LGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR---R 141
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMP 679
           ++H D+  +N+L+    + +I+DFGLAKLL  ++   +    G K    ++A E   +  
Sbjct: 142 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALESILHRI 199
Query: 680 ITVKVDVYSYGVLLLEII 697
            T + DV+SYGV + E++
Sbjct: 200 YTHQSDVWSYGVTVWELM 217

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  + + VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 40  VGSGAYGSVCAAF-DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 98
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 99  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 152
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 153 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 200
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 201 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 96/198 (48%), Gaps = 19/198 (9%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   +  +   N VA+KKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 32  IGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLN 90
Query: 567 Y------CDEGQNRLLVYEFM-SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEEC 619
                   +E Q+  +V E M +N +    +  D +    L  ++ +GI     +LH   
Sbjct: 91  VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIK----HLH--- 143
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP 679
              IIH D+KP NI++      +I DFGLA+  T   S   T    T+ Y APE    M 
Sbjct: 144 SAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 680 ITVKVDVYSYGVLLLEII 697
               VD++S GV++ E+I
Sbjct: 202 YKENVDIWSVGVIMGEMI 219

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 94/207 (45%), Gaps = 31/207 (14%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  + + VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 30  VGSGAYGSVCAAF-DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 142
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRG---TKGYVAPEW 674
                IIH D+KP N+ +++    +I DFGLA+       HT+  + G   T+ Y APE 
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRWYRAPEI 193
Query: 675 FRN-MPITVKVDVYSYGVLLLEIICLR 700
             N M     VD++S G ++ E++  R
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 16/198 (8%)
Query: 509 LGRGAFGTVYKG-FVNMGSSNH--VAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG GAFGTVYKG ++  G      VA+K+L  +    + KE   E   +    + ++ RL
Sbjct: 33  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQ 622
           LG C     +L+  + M  G +  ++  + K N   +  +   + IA G+ YL +    +
Sbjct: 93  LGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR---R 147
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMP 679
           ++H D+  +N+L+    + +I+DFGLAKLL  ++   +    G K    ++A E   +  
Sbjct: 148 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALESILHRI 205
Query: 680 ITVKVDVYSYGVLLLEII 697
            T + DV+SYGV + E++
Sbjct: 206 YTHQSDVWSYGVTVWELM 223

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 94/207 (45%), Gaps = 31/207 (14%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  + + VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 30  VGSGAYGSVCAAF-DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 142
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRG---TKGYVAPEW 674
                IIH D+KP N+ +++    +I DFGLA+       HT+  + G   T+ Y APE 
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRWYRAPEI 193
Query: 675 FRN-MPITVKVDVYSYGVLLLEIICLR 700
             N M     VD++S G ++ E++  R
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 100/200 (50%), Gaps = 20/200 (10%)
Query: 509 LGRGAFGTVYKG-FVNMGSSNH--VAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG GAFGTVYKG ++  G      VA+K+L  +    + KE   E   +    + ++ RL
Sbjct: 23  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQ 622
           LG C     +L+  + M  G +  ++  + K N   +  +   + IA G+ YL +    +
Sbjct: 83  LGICLTSTVQLIT-QLMPFGXLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR---R 137
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           ++H D+  +N+L+    + +I+DFGLAKLL  ++   +       G V  +W     I  
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVPIKWMALESILH 193
Query: 683 KV-----DVYSYGVLLLEII 697
           ++     DV+SYGV + E++
Sbjct: 194 RIYTHQSDVWSYGVTVWELM 213

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  + + VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 26  VGSGAYGSVCAAF-DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 85  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 138
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 139 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 186
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 30  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF-----LIYQILRGLKYIH- 142
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 143 --SADIIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEM---TGYVATRWYRA 190
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 100/200 (50%), Gaps = 20/200 (10%)
Query: 509 LGRGAFGTVYKG-FVNMGSSNH--VAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG GAFGTVYKG ++  G      VA+K+L  +    + KE   E   +    + ++ RL
Sbjct: 23  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQ 622
           LG C     +L+  + M  G +  ++  + K N   +  +   + IA G+ YL +    +
Sbjct: 83  LGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR---R 137
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           ++H D+  +N+L+    + +I+DFGLAKLL  ++   +       G V  +W     I  
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVPIKWMALESILH 193
Query: 683 KV-----DVYSYGVLLLEII 697
           ++     DV+SYGV + E++
Sbjct: 194 RIYTHQSDVWSYGVTVWELM 213

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 16/198 (8%)
Query: 509 LGRGAFGTVYKG-FVNMGSSNH--VAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG GAFGTVYKG ++  G      VA+K+L  +    + KE   E   +    + ++ RL
Sbjct: 17  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQ 622
           LG C     +L+  + M  G +  ++  + K N   +  +   + IA G+ YL +    +
Sbjct: 77  LGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR---R 131
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMP 679
           ++H D+  +N+L+    + +I+DFGLAKLL  ++   +    G K    ++A E   +  
Sbjct: 132 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALESILHRI 189
Query: 680 ITVKVDVYSYGVLLLEII 697
            T + DV+SYGV + E++
Sbjct: 190 YTHQSDVWSYGVTVWELM 207

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 100/200 (50%), Gaps = 20/200 (10%)
Query: 509 LGRGAFGTVYKG-FVNMGSSNH--VAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG GAFGTVYKG ++  G      VA+K+L  +    + KE   E   +    + ++ RL
Sbjct: 23  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQ 622
           LG C     +L+  + M  G +  ++  + K N   +  +   + IA G+ YL +    +
Sbjct: 83  LGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR---R 137
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           ++H D+  +N+L+    + +I+DFGLAKLL  ++   +       G V  +W     I  
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVPIKWMALESILH 193
Query: 683 KV-----DVYSYGVLLLEII 697
           ++     DV+SYGV + E++
Sbjct: 194 RIYTHQSDVWSYGVTVWELM 213

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 90/201 (44%), Gaps = 19/201 (9%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-----FQDSEKEFKAEVNGIGQTHHKNLV 562
           E+G GA+GTVYK   +  S + VA+K +           S     A +  +    H N+V
Sbjct: 11  EIGVGAYGTVYKA-RDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVV 69
Query: 563 RLLGYC-----DEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYL 615
           RL+  C     D      LV+E +    + ++L     P     T  ++      GL +L
Sbjct: 70  RLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL 128
Query: 616 HEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF 675
           H  C   I+H D+KP+NIL+      +++DFGLA++ +   +     +  T  Y APE  
Sbjct: 129 HANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV--TLWYRAPEVL 183
Query: 676 RNMPITVKVDVYSYGVLLLEI 696
                   VD++S G +  E+
Sbjct: 184 LQSTYATPVDMWSVGCIFAEM 204

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  + + VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 49  VGSGAYGSVCAAF-DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 107
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 161
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 162 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 209
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  + + VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 50  VGSGAYGSVCAAF-DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 108
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 162
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 163 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 210
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 94/207 (45%), Gaps = 31/207 (14%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  + + VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 50  VGSGAYGSVCAAF-DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 108
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 162
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRG---TKGYVAPEW 674
                IIH D+KP N+ +++    +I DFGLA+       HT+  + G   T+ Y APE 
Sbjct: 163 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGXVATRWYRAPEI 213
Query: 675 FRN-MPITVKVDVYSYGVLLLEIICLR 700
             N M     VD++S G ++ E++  R
Sbjct: 214 MLNWMHYNQTVDIWSVGCIMAELLTGR 240

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 35  IGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 94  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 147
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 148 --SADIIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEM---TGYVATRWYRA 195
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 92/193 (47%), Gaps = 9/193 (4%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G+G F  V K   ++ +   VA+K ++    +  S ++   EV  +   +H N+V+L  
Sbjct: 20  IGKGNFAKV-KLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 78
Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHC 626
             +  +   L+ E+ S G V  +L    +   K        I   + Y H++   +I+H 
Sbjct: 79  VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK---RIVHR 135
Query: 627 DIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT-VKVD 685
           D+K +N+LLD   N +I+DFG +   T+          G+  Y APE F+       +VD
Sbjct: 136 DLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFC--GSPPYAAPELFQGKKYDGPEVD 193
Query: 686 VYSYGVLLLEIIC 698
           V+S GV+L  ++ 
Sbjct: 194 VWSLGVILYTLVS 206

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 100/200 (50%), Gaps = 20/200 (10%)
Query: 509 LGRGAFGTVYKG-FVNMGSSNH--VAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG GAFGTVYKG ++  G      VA+K+L  +    + KE   E   +    + ++ RL
Sbjct: 25  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQ 622
           LG C     +L+  + M  G +  ++  + K N   +  +   + IA G+ YL +    +
Sbjct: 85  LGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR---R 139
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           ++H D+  +N+L+    + +I+DFGLAKLL  ++   +       G V  +W     I  
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVPIKWMALESILH 195
Query: 683 KV-----DVYSYGVLLLEII 697
           ++     DV+SYGV + E++
Sbjct: 196 RIYTHQSDVWSYGVTVWELM 215

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 85/192 (44%), Gaps = 7/192 (3%)
Query: 509 LGRGAFGTVYKG-FVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT--HHKNLVRLL 565
           LG+G+FG V+   F        +   K + V  D + E       +      H  L  + 
Sbjct: 25  LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF 84
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
                 +N   V E+++ G +   +    K +    T  A  I  GL +LH +    I++
Sbjct: 85  CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG---IVY 141
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D+K  NILLD   + +I+DFG+ K   L  + TN    GT  Y+APE          VD
Sbjct: 142 RDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC-GTPDYIAPEILLGQKYNHSVD 200
Query: 686 VYSYGVLLLEII 697
            +S+GVLL E++
Sbjct: 201 WWSFGVLLYEML 212

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 16/198 (8%)
Query: 509 LGRGAFGTVYKG-FVNMGSSNH--VAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG GAFGTVYKG ++  G      VA+K+L  +    + KE   E   +    + ++ RL
Sbjct: 26  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQ 622
           LG C     +L+  + M  G +  ++  + K N   +  +   + IA G+ YL +    +
Sbjct: 86  LGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR---R 140
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMP 679
           ++H D+  +N+L+    + +I+DFGLAKLL  ++   +    G K    ++A E   +  
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALESILHRI 198
Query: 680 ITVKVDVYSYGVLLLEII 697
            T + DV+SYGV + E++
Sbjct: 199 YTHQSDVWSYGVTVWELM 216

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 91/194 (46%), Gaps = 11/194 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFKAEVNGIGQTHHKNLVRLL 565
           +G+G F  V K   ++ +   VAVK ++    +S   +K F+ EV  +   +H N+V+L 
Sbjct: 15  IGKGNFAKV-KLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLF 72
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
              +  +   LV E+ S G V  +L        K        I   + Y H++    I+H
Sbjct: 73  EVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKF---IVH 129
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT-VKV 684
            D+K +N+LLD   N +I+DFG +   T           G+  Y APE F+       +V
Sbjct: 130 RDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC--GSPPYAAPELFQGKKYDGPEV 187
Query: 685 DVYSYGVLLLEIIC 698
           DV+S GV+L  ++ 
Sbjct: 188 DVWSLGVILYTLVS 201

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 100/200 (50%), Gaps = 20/200 (10%)
Query: 509 LGRGAFGTVYKG-FVNMGSSNH--VAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG GAFGTVYKG ++  G      VA+K+L  +    + KE   E   +    + ++ RL
Sbjct: 26  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQ 622
           LG C     +L+  + M  G +  ++  + K N   +  +   + IA G+ YL +    +
Sbjct: 86  LGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR---R 140
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           ++H D+  +N+L+    + +I+DFGLAKLL  ++   +       G V  +W     I  
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVPIKWMALESILH 196
Query: 683 KV-----DVYSYGVLLLEII 697
           ++     DV+SYGV + E++
Sbjct: 197 RIYTHQSDVWSYGVTVWELM 216

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 16/198 (8%)
Query: 509 LGRGAFGTVYKG-FVNMGSSNH--VAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG GAFGTVYKG ++  G      VA+K+L  +    + KE   E   +    + ++ RL
Sbjct: 30  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQ 622
           LG C     +L+  + M  G +  ++  + K N   +  +   + IA G+ YL +    +
Sbjct: 90  LGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR---R 144
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMP 679
           ++H D+  +N+L+    + +I+DFGLAKLL  ++   +    G K    ++A E   +  
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALESILHRI 202
Query: 680 ITVKVDVYSYGVLLLEII 697
            T + DV+SYGV + E++
Sbjct: 203 YTHQSDVWSYGVTVWELM 220

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 100/200 (50%), Gaps = 20/200 (10%)
Query: 509 LGRGAFGTVYKG-FVNMGSSNH--VAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG GAFGTVYKG ++  G      VA+K+L  +    + KE   E   +    + ++ RL
Sbjct: 26  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQ 622
           LG C     +L+  + M  G +  ++  + K N   +  +   + IA G+ YL +    +
Sbjct: 86  LGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR---R 140
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           ++H D+  +N+L+    + +I+DFGLAKLL  ++   +       G V  +W     I  
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVPIKWMALESILH 196
Query: 683 KV-----DVYSYGVLLLEII 697
           ++     DV+SYGV + E++
Sbjct: 197 RIYTHQSDVWSYGVTVWELM 216

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 129/296 (43%), Gaps = 53/296 (17%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           E +G G FG V+K    +    +V ++++    + +E+E KA    + +  H N+V   G
Sbjct: 18  ELIGSGGFGQVFKAKHRIDGKTYV-IRRVKYNNEKAEREVKA----LAKLDHVNIVHYNG 72
Query: 567 YCD-----------------------EGQNR------LLVYEFMSNGTVASFLFGD--SK 595
             D                       +  +R       +  EF   GT+  ++      K
Sbjct: 73  CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK 132
Query: 596 PNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD 655
            +  L  E+   I  G+ Y+H +   ++IH D+KP NI L D    +I DFGL   L  D
Sbjct: 133 LDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKND 189
Query: 656 QSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEI--ICLRRNIDNEISK---- 709
              T +  +GT  Y++PE   +     +VD+Y+ G++L E+  +C   +   E SK    
Sbjct: 190 GKRTRS--KGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVC---DTAFETSKFFTD 244
Query: 710 VDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPT 765
           +   I++D  +D+ ++  L+ L+    E   N + + R + V  W    + + R T
Sbjct: 245 LRDGIISD-IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTV--WKKSPEKNERHT 297

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 16/198 (8%)
Query: 509 LGRGAFGTVYKG-FVNMGSSNH--VAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG GAFGTVYKG ++  G      VA+K+L  +    + KE   E   +    + ++ RL
Sbjct: 29  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQ 622
           LG C     +L+  + M  G +  ++  + K N   +  +   + IA G+ YL +    +
Sbjct: 89  LGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR---R 143
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMP 679
           ++H D+  +N+L+    + +I+DFGLAKLL  ++   +    G K    ++A E   +  
Sbjct: 144 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALESILHRI 201
Query: 680 ITVKVDVYSYGVLLLEII 697
            T + DV+SYGV + E++
Sbjct: 202 YTHQSDVWSYGVTVWELM 219

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 94/207 (45%), Gaps = 31/207 (14%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  + + VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 26  VGSGAYGSVCAAF-DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 85  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 138
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRG---TKGYVAPEW 674
                IIH D+KP N+ +++    +I DFGLA+       HT+  + G   T+ Y APE 
Sbjct: 139 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRWYRAPEI 189
Query: 675 FRN-MPITVKVDVYSYGVLLLEIICLR 700
             N M     VD++S G ++ E++  R
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGR 216

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 16/198 (8%)
Query: 509 LGRGAFGTVYKG-FVNMGSSNH--VAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG GAFGTVYKG ++  G      VA+K+L  +    + KE   E   +    + ++ RL
Sbjct: 48  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 107
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQ 622
           LG C     +L+  + M  G +  ++  + K N   +  +   + IA G+ YL +    +
Sbjct: 108 LGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR---R 162
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMP 679
           ++H D+  +N+L+    + +I+DFGLAKLL  ++   +    G K    ++A E   +  
Sbjct: 163 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALESILHRI 220
Query: 680 ITVKVDVYSYGVLLLEII 697
            T + DV+SYGV + E++
Sbjct: 221 YTHQSDVWSYGVTVWELM 238

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 102/223 (45%), Gaps = 37/223 (16%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E        E++ + + +H N+
Sbjct: 9   EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 64
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV----ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+EF+         AS L G   P   L       +  GL + H 
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 121
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
               +++H D+KP+N+L++     +++DFGLA+            +R     V   W+R 
Sbjct: 122 H---RVLHRDLKPENLLINTEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRA 171
Query: 678 MPI-------TVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
             I       +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 213

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 95/207 (45%), Gaps = 31/207 (14%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   + ++ S   +AVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 59  VGSGAYGSVCSSY-DVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 117
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 118 VFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 171
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRG---TKGYVAPEW 674
                IIH D+KP N+ +++    +I DFGLA+       HT+  + G   T+ Y APE 
Sbjct: 172 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATRWYRAPEI 222
Query: 675 FRN-MPITVKVDVYSYGVLLLEIICLR 700
             N M   + VD++S G ++ E++  R
Sbjct: 223 MLNWMHYNMTVDIWSVGCIMAELLTGR 249

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 17/200 (8%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQTHH-KNLVRLL 565
           E+GRGA+G+V K  V+  S   +AVK++ S   + E K+   +++ + ++     +V+  
Sbjct: 29  EIGRGAYGSVNK-MVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFY 87
Query: 566 GYCDEGQNRLLVYEFMSNGTVASF-----LFGDSKPNWKLRTEIAMGIAGGLFYLHEECC 620
           G      +  +  E MS      +     +  D  P  ++  +I +     L +L E   
Sbjct: 88  GALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPE-EILGKITLATVKALNHLKEN-- 144
Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF----R 676
            +IIH DIKP NILLD   N ++ DFG++  L    + T  A  G + Y+APE       
Sbjct: 145 LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDA--GCRPYMAPERIDPSAS 202
Query: 677 NMPITVKVDVYSYGVLLLEI 696
                V+ DV+S G+ L E+
Sbjct: 203 RQGYDVRSDVWSLGITLYEL 222

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 90/201 (44%), Gaps = 19/201 (9%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-----FQDSEKEFKAEVNGIGQTHHKNLV 562
           E+G GA+GTVYK   +  S + VA+K +           S     A +  +    H N+V
Sbjct: 11  EIGVGAYGTVYKA-RDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVV 69
Query: 563 RLLGYC-----DEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYL 615
           RL+  C     D      LV+E +    + ++L     P     T  ++      GL +L
Sbjct: 70  RLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL 128
Query: 616 HEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF 675
           H  C   I+H D+KP+NIL+      +++DFGLA++ +   +     +  T  Y APE  
Sbjct: 129 HANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV--TLWYRAPEVL 183
Query: 676 RNMPITVKVDVYSYGVLLLEI 696
                   VD++S G +  E+
Sbjct: 184 LQSTYATPVDMWSVGCIFAEM 204

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 101/201 (50%), Gaps = 22/201 (10%)
Query: 509 LGRGAFGTVY-KGFVNMGSSNHV----AVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVR 563
           LG+G+FG V+    V    S H+     +KK     +D  +  K E + +   +H  +V+
Sbjct: 36  LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRT-KMERDILADVNHPFVVK 94
Query: 564 LLGYCDEGQNRL-LVYEFMSNGTV-----ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           L  Y  + + +L L+ +F+  G +        +F +    + L  E+A+G+     +LH 
Sbjct: 95  L-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL-AELALGLD----HLH- 147
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                II+ D+KP+NILLD+  + +++DFGL+K   +D      +  GT  Y+APE    
Sbjct: 148 --SLGIIYRDLKPENILLDEEGHIKLTDFGLSK-EAIDHEKKAYSFCGTVEYMAPEVVNR 204
Query: 678 MPITVKVDVYSYGVLLLEIIC 698
              +   D +SYGVL+ E++ 
Sbjct: 205 QGHSHSADWWSYGVLMFEMLT 225

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 35  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 94  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 147
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 148 --SADIIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEM---TGYVATRWYRA 195
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 94/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  + + VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 36  VGSGAYGSVCAAF-DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 95  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 148
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 149 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 196
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 85/192 (44%), Gaps = 7/192 (3%)
Query: 509 LGRGAFGTVYKG-FVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT--HHKNLVRLL 565
           LG+G+FG V+   F        +   K + V  D + E       +      H  L  + 
Sbjct: 26  LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF 85
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
                 +N   V E+++ G +   +    K +    T  A  I  GL +LH +    I++
Sbjct: 86  CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG---IVY 142
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D+K  NILLD   + +I+DFG+ K   L  + TN    GT  Y+APE          VD
Sbjct: 143 RDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFC-GTPDYIAPEILLGQKYNHSVD 201
Query: 686 VYSYGVLLLEII 697
            +S+GVLL E++
Sbjct: 202 WWSFGVLLYEML 213

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 118/272 (43%), Gaps = 31/272 (11%)
Query: 506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           KE +G G++    K  V+  ++   AVK ++   +D  +E +  +   GQ  H N++ L 
Sbjct: 32  KETIGVGSYSEC-KRCVHKATNMEYAVKVIDKSKRDPSEEIEILLR-YGQ--HPNIITLK 87
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL-----FGDSKPNWKLRTEIAMGIAGGLFYLHEECC 620
              D+G++  LV E M  G +   +     F + + ++ L T     I   + YLH +  
Sbjct: 88  DVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHT-----IGKTVEYLHSQG- 141
Query: 621 TQIIHCDIKPQNIL-LDDHYNA---RISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR 676
             ++H D+KP NIL +D+  N    RI DFG AK L  +     T    T  +VAPE  +
Sbjct: 142 --VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLK 198
Query: 677 NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQ---------ERT 727
                   D++S G+LL  ++       N  S   + ILT     ++            T
Sbjct: 199 RQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSET 258
Query: 728 LEALVENDLEAMNNVTMLHRFVMVAFWCIQED 759
            + LV   L    +  +  + V+   W  Q+D
Sbjct: 259 AKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKD 290

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 16/198 (8%)
Query: 509 LGRGAFGTVYKG-FVNMGSSNH--VAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG GAFGTVYKG ++  G      VA+K+L  +    + KE   E   +    + ++ RL
Sbjct: 20  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQ 622
           LG C     +L+  + M  G +  ++  + K N   +  +   + IA G+ YL +    +
Sbjct: 80  LGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAEGMNYLEDR---R 134
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMP 679
           ++H D+  +N+L+    + +I+DFGLAKLL  ++   +    G K    ++A E   +  
Sbjct: 135 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALESILHRI 192
Query: 680 ITVKVDVYSYGVLLLEII 697
            T + DV+SYGV + E++
Sbjct: 193 YTHQSDVWSYGVTVWELM 210

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 102/223 (45%), Gaps = 37/223 (16%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E        E++ + + +H N+
Sbjct: 11  EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 66
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV----ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+EF+         AS L G   P   L       +  GL + H 
Sbjct: 67  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 123
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
               +++H D+KP+N+L++     +++DFGLA+            +R     V   W+R 
Sbjct: 124 H---RVLHRDLKPENLLINTEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRA 173
Query: 678 MPI-------TVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
             I       +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 215

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 41  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 99
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 153
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 154 --SADIIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEM---TGYVATRWYRA 201
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 14/209 (6%)
Query: 495 YKELVEVTRGF--KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG 552
           ++  ++ T G+  KE++G G++ +V K  ++  ++   AVK ++   +D  +E +  +  
Sbjct: 14  HRNSIQFTDGYEVKEDIGVGSY-SVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLR- 71
Query: 553 IGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGL 612
            GQ  H N++ L    D+G+   +V E M  G +   +      + +  + +   I   +
Sbjct: 72  YGQ--HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTV 129
Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHY----NARISDFGLAKLLTLDQSHTNTAIRGTKG 668
            YLH +    ++H D+KP NIL  D      + RI DFG AK L  +     T    T  
Sbjct: 130 EYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY-TAN 185
Query: 669 YVAPEWFRNMPITVKVDVYSYGVLLLEII 697
           +VAPE           D++S GVLL  ++
Sbjct: 186 FVAPEVLERQGYDAACDIWSLGVLLYTML 214

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 27/218 (12%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+ K+     D+E E        E++ + + +H N+
Sbjct: 9   EKIGEGTYGVVYKA-RNKLTGEVVALXKIR---LDTETEGVPSTAIREISLLKELNHPNI 64
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV----ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+EF+         AS L G   P   L       +  GL + H 
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 121
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD-QSHTNTAIRGTKGYVAPEWFR 676
               +++H D+KPQN+L++     +++DFGLA+   +  +++T+  +  T  Y APE   
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 176
Query: 677 NMP-ITVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
                +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 213

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 27/218 (12%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+ K+     D+E E        E++ + + +H N+
Sbjct: 8   EKIGEGTYGVVYKA-RNKLTGEVVALXKIR---LDTETEGVPSTAIREISLLKELNHPNI 63
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV----ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+EF+         AS L G   P   L       +  GL + H 
Sbjct: 64  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 120
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD-QSHTNTAIRGTKGYVAPEWFR 676
               +++H D+KPQN+L++     +++DFGLA+   +  +++T+  +  T  Y APE   
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 175
Query: 677 NMP-ITVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
                +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 212

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 31/213 (14%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVK-----KLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           E +G+GAF  V +  +N  +    AVK     K  S    S ++ K E +      H ++
Sbjct: 30  EVIGKGAFSVVRRC-INRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 88
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV---------ASFLFGDSKPNWKLRTEIAMGIAGGL 612
           V LL          +V+EFM    +         A F++ ++  +  +R      I   L
Sbjct: 89  VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ-----ILEAL 143
Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNA---RISDFGLAKLLTLDQSHTNTAIR-GTKG 668
            Y H+     IIH D+KP+N+LL    N+   ++ DFG+A  + L +S      R GT  
Sbjct: 144 RYCHD---NNIIHRDVKPENVLLASKENSAPVKLGDFGVA--IQLGESGLVAGGRVGTPH 198
Query: 669 YVAPEWFRNMPITVKVDVYSYGVLLLEII--CL 699
           ++APE  +  P    VDV+  GV+L  ++  CL
Sbjct: 199 FMAPEVVKREPYGKPVDVWGCGVILFILLSGCL 231

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 82/196 (41%), Gaps = 16/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS------EKEFKAEVNGIGQTHHKNLV 562
           LG+G FG VY          +  +  L  +F+        E + + E+       H N++
Sbjct: 22  LGKGKFGNVYLA----REKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNIL 77
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           R+  Y  + +   L+ EF   G +   L    + + +        +A  L Y HE    +
Sbjct: 78  RMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER---K 134
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +IH DIKP+N+L+      +I+DFG +       S     + GT  Y+ PE         
Sbjct: 135 VIHRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRRXMCGTLDYLPPEMIEGKTHDE 191
Query: 683 KVDVYSYGVLLLEIIC 698
           KVD++  GVL  E + 
Sbjct: 192 KVDLWCAGVLCYEFLV 207

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 102/223 (45%), Gaps = 37/223 (16%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E        E++ + + +H N+
Sbjct: 10  EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 65
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV----ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+EF+         AS L G   P   L       +  GL + H 
Sbjct: 66  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 122
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
               +++H D+KP+N+L++     +++DFGLA+            +R     V   W+R 
Sbjct: 123 H---RVLHRDLKPENLLINTEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRA 172
Query: 678 MPI-------TVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
             I       +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 214

>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 122/292 (41%), Gaps = 36/292 (12%)
Query: 505 FKEELGRGAFGTVYKGF------VNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHH 558
           F E LG+G F  ++KG               V +K L+   ++  + F    + + +  H
Sbjct: 12  FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDS---KPNWKLRTEIAMGIAGGLFYL 615
           K+LV   G C  G   +LV EF+  G++ ++L  +       WKL  E+A  +A  + +L
Sbjct: 72  KHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKL--EVAKQLAWAMHFL 129
Query: 616 HEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT---NTAIRGTKGYVAP 672
            E     +IH ++  +NILL    + +  +    KL     S T      ++    +V P
Sbjct: 130 EE---NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPP 186
Query: 673 EWFRNMP-ITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEAL 731
           E   N   + +  D +S+G  L EI       D  +S +D      +  DR+Q    +A 
Sbjct: 187 ECIENPKNLNLATDKWSFGTTLWEICS---GGDKPLSALDSQRKLQFYEDRHQLPAPKAA 243
Query: 732 VENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPIPP 783
              +L  +NN             C+  +P HRP+ R + + L  +    + P
Sbjct: 244 ELANL--INN-------------CMDYEPDHRPSFRAIIRDLNSLFTPDLVP 280

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 30  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V S    D    +     +   I  GL Y+H 
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQF-----LIYQILRGLKYIH- 142
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGL +       HT+  +    GYVA  W+R 
Sbjct: 143 --SADIIHRDLKPSNLAVNEDSELKILDFGLCR-------HTDDEM---TGYVATRWYRA 190
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 118/272 (43%), Gaps = 31/272 (11%)
Query: 506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           KE +G G++    K  V+  ++   AVK ++   +D  +E +  +   GQ  H N++ L 
Sbjct: 32  KETIGVGSYSEC-KRCVHKATNMEYAVKVIDKSKRDPSEEIEILLR-YGQ--HPNIITLK 87
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL-----FGDSKPNWKLRTEIAMGIAGGLFYLHEECC 620
              D+G++  LV E M  G +   +     F + + ++ L T     I   + YLH +  
Sbjct: 88  DVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHT-----IGKTVEYLHSQG- 141
Query: 621 TQIIHCDIKPQNIL-LDDHYNA---RISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR 676
             ++H D+KP NIL +D+  N    RI DFG AK L  +     T    T  +VAPE  +
Sbjct: 142 --VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLK 198
Query: 677 NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQ---------ERT 727
                   D++S G+LL  ++       N  S   + ILT     ++            T
Sbjct: 199 RQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSET 258
Query: 728 LEALVENDLEAMNNVTMLHRFVMVAFWCIQED 759
            + LV   L    +  +  + V+   W  Q+D
Sbjct: 259 AKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKD 290

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 32  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 91  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 144
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 145 --SADIIHRDLKPSNLAVNEDSELKILDFGLAR-------HTDDEM---TGYVATRWYRA 192
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 82/196 (41%), Gaps = 16/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS------EKEFKAEVNGIGQTHHKNLV 562
           LG+G FG VY          +  +  L  +F+        E + + E+       H N++
Sbjct: 23  LGKGKFGNVYLA----REKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNIL 78
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           R+  Y  + +   L+ EF   G +   L    + + +        +A  L Y HE    +
Sbjct: 79  RMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER---K 135
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +IH DIKP+N+L+      +I+DFG +       S     + GT  Y+ PE         
Sbjct: 136 VIHRDIKPENLLMGYKGELKIADFGWS---VHAPSLRRRXMCGTLDYLPPEMIEGKTHDE 192
Query: 683 KVDVYSYGVLLLEIIC 698
           KVD++  GVL  E + 
Sbjct: 193 KVDLWCAGVLCYEFLV 208

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 30  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQF-----LIYQILRGLKYIH- 142
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 190
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 36  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 95  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 148
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 149 --SADIIHRDLKPSNLAVNEDSELKILDFGLAR-------HTDDEM---TGYVATRWYRA 196
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 22/201 (10%)
Query: 509 LGRGAFGTVY----------KGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHH 558
           LG+G+FG V+          +    M       +K  + V    E++   EVN      H
Sbjct: 32  LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN------H 85
Query: 559 KNLVRLLGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
             +V+L  Y  + + +L L+ +F+  G + + L   SK       ++   +A     L  
Sbjct: 86  PFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALALDH 141
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                II+ D+KP+NILLD+  + +++DFGL+K  ++D      +  GT  Y+APE    
Sbjct: 142 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYMAPEVVNR 200
Query: 678 MPITVKVDVYSYGVLLLEIIC 698
              T   D +S+GVL+ E++ 
Sbjct: 201 RGHTQSADWWSFGVLMFEMLT 221

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 93/198 (46%), Gaps = 19/198 (9%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   F  +   N VAVKKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 32  IGSGAQGIVCAAFDTVLGIN-VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLN 90
Query: 567 Y------CDEGQNRLLVYEFM-SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEEC 619
                   +E Q+  LV E M +N      +  D +    L  ++  GI     +LH   
Sbjct: 91  VFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIK----HLHS-- 144
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP 679
              IIH D+KP NI++      +I DFGLA+    +   T   +  T+ Y APE    M 
Sbjct: 145 -AGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVV--TRYYRAPEVILGMG 201
Query: 680 ITVKVDVYSYGVLLLEII 697
               VD++S G ++ E++
Sbjct: 202 YAANVDIWSVGCIMGELV 219

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 42  VGSGAYGSVCAAF-DTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 100
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 154
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 155 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 202
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 21/200 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   +  +   N VA+KKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 37  IGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN 95
Query: 567 Y------CDEGQNRLLVYEFMSNG--TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
                   +E Q+  +V E M      V        + ++ L   +      G+ +LH  
Sbjct: 96  VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHS- 149
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               IIH D+KP NI++      +I DFGLA+  T   S   T    T+ Y APE    M
Sbjct: 150 --AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 205
Query: 679 PITVKVDVYSYGVLLLEIIC 698
                VD++S G ++ E++C
Sbjct: 206 GYKENVDLWSVGCIMGEMVC 225

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 30  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 142
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 190
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 14/194 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVA----VKKLNSVFQDSEKEFKAEVNGIGQTHHKNLV 562
           EELG+GAF  V +    +    + A     KKL++  +D +K  + E        H N+V
Sbjct: 28  EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSA--RDHQK-LEREARICRLLKHPNIV 84
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           RL     E  +  L+++ ++ G +   +      +    +     I   + + H+     
Sbjct: 85  RLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ---MG 141
Query: 623 IIHCDIKPQNILLDDHYNA---RISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP 679
           ++H D+KP+N+LL         +++DFGLA  +  +Q        GT GY++PE  R  P
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ-AWFGFAGTPGYLSPEVLRKDP 200
Query: 680 ITVKVDVYSYGVLL 693
               VD+++ GV+L
Sbjct: 201 YGKPVDLWACGVIL 214

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 21/200 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   +  +   N VA+KKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 26  IGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN 84
Query: 567 Y------CDEGQNRLLVYEFMSNG--TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
                   +E Q+  +V E M      V        + ++ L   +      G+ +LH  
Sbjct: 85  VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHS- 138
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               IIH D+KP NI++      +I DFGLA+  T   S   T    T+ Y APE    M
Sbjct: 139 --AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 194
Query: 679 PITVKVDVYSYGVLLLEIIC 698
                VD++S G ++ E++C
Sbjct: 195 GYKENVDLWSVGCIMGEMVC 214

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 30  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 142
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 190
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 30  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 142
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 190
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 90/191 (47%), Gaps = 14/191 (7%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLN--SVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           LG+G+FG V K   +  +    AVK +N  S           EV  + +  H N+++L  
Sbjct: 30  LGKGSFGEVLKC-KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHC 626
             ++  +  +V E  + G +   +    + +      I   +  G+ Y+H+     I+H 
Sbjct: 89  ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHR 145
Query: 627 DIKPQNILLDDHY---NARISDFGLAKLLTLDQSHTNTAIR-GTKGYVAPEWFRNMPITV 682
           D+KP+NILL+      + +I DFGL+   T  Q +T    R GT  Y+APE  R      
Sbjct: 146 DLKPENILLESKEKDCDIKIIDFGLS---TCFQQNTKMKDRIGTAYYIAPEVLRG-TYDE 201
Query: 683 KVDVYSYGVLL 693
           K DV+S GV+L
Sbjct: 202 KCDVWSAGVIL 212

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 41  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 99
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 153
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 154 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 201
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 90/191 (47%), Gaps = 14/191 (7%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLN--SVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           LG+G+FG V K    +    + AVK +N  S           EV  + +  H N+++L  
Sbjct: 30  LGKGSFGEVLKCKDRITQQEY-AVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHC 626
             ++  +  +V E  + G +   +    + +      I   +  G+ Y+H+     I+H 
Sbjct: 89  ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHR 145
Query: 627 DIKPQNILLDDHY---NARISDFGLAKLLTLDQSHTNTAIR-GTKGYVAPEWFRNMPITV 682
           D+KP+NILL+      + +I DFGL+   T  Q +T    R GT  Y+APE  R      
Sbjct: 146 DLKPENILLESKEKDCDIKIIDFGLS---TCFQQNTKMKDRIGTAYYIAPEVLRG-TYDE 201
Query: 683 KVDVYSYGVLL 693
           K DV+S GV+L
Sbjct: 202 KCDVWSAGVIL 212

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 37  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 96  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 149
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 150 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 197
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 96/221 (43%), Gaps = 41/221 (18%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYC 568
           LG+GAFG V K   N   S + A+KK+    ++      +EV  +   +H+ +VR     
Sbjct: 14  LGQGAFGQVVKA-RNALDSRYYAIKKIRHT-EEKLSTILSEVXLLASLNHQYVVRYYAAW 71
Query: 569 DEGQN-------------RLLVYEFMSNGTVASFLFGDS-----KPNWKLRTEIAMGIAG 610
            E +N               +  E+  N T+   +  ++        W+L  +I   ++ 
Sbjct: 72  LERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALS- 130
Query: 611 GLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK-------LLTLD------QS 657
              Y+H +    IIH ++KP NI +D+  N +I DFGLAK       +L LD       S
Sbjct: 131 ---YIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 658 HTNTAIRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEII 697
              T+  GT  YVA E          K+D YS G++  E I
Sbjct: 185 DNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 35  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 94  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 147
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 148 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 195
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 29  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 87
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 88  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 141
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 142 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 189
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 190 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 90/191 (47%), Gaps = 14/191 (7%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLN--SVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           LG+G+FG V K    +    + AVK +N  S           EV  + +  H N+++L  
Sbjct: 30  LGKGSFGEVLKCKDRITQQEY-AVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHC 626
             ++  +  +V E  + G +   +    + +      I   +  G+ Y+H+     I+H 
Sbjct: 89  ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHR 145
Query: 627 DIKPQNILLDDHY---NARISDFGLAKLLTLDQSHTNTAIR-GTKGYVAPEWFRNMPITV 682
           D+KP+NILL+      + +I DFGL+   T  Q +T    R GT  Y+APE  R      
Sbjct: 146 DLKPENILLESKEKDCDIKIIDFGLS---TCFQQNTKMKDRIGTAYYIAPEVLRG-TYDE 201
Query: 683 KVDVYSYGVLL 693
           K DV+S GV+L
Sbjct: 202 KCDVWSAGVIL 212

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 42  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 100
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 154
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 155 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 202
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 42  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 100
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 154
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 155 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 202
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 30  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 142
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 190
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 191 PEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 32  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 91  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 144
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 145 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 192
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 32  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 91  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 144
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 145 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 192
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 30  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 142
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 190
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 53  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 111
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 165
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 166 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---XGYVATRWYRA 213
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 21/199 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   +  +   N VA+KKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 32  IGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLN 90
Query: 567 Y------CDEGQNRLLVYEFMSNG--TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
                   +E Q+  LV E M      V        + ++ L       +  G+ +LH  
Sbjct: 91  VFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQ-----MLXGIKHLH-- 143
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               IIH D+KP NI++      +I DFGLA+  T   S   T    T+ Y APE    M
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 679 PITVKVDVYSYGVLLLEII 697
                VD++S G ++ E++
Sbjct: 201 GYKENVDIWSVGCIMGEMV 219

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 30  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 142
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 190
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 30  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 142
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 190
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 22/201 (10%)
Query: 509 LGRGAFGTVY----------KGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHH 558
           LG+G+FG V+          +    M       +K  + V    E++   EVN      H
Sbjct: 33  LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN------H 86
Query: 559 KNLVRLLGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
             +V+L  Y  + + +L L+ +F+  G + + L   SK       ++   +A     L  
Sbjct: 87  PFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALALDH 142
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                II+ D+KP+NILLD+  + +++DFGL+K  ++D      +  GT  Y+APE    
Sbjct: 143 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYMAPEVVNR 201
Query: 678 MPITVKVDVYSYGVLLLEIIC 698
              T   D +S+GVL+ E++ 
Sbjct: 202 RGHTQSADWWSFGVLMFEMLT 222

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 32  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 90
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 91  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 144
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 145 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 192
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 27  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 85
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 86  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 139
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 140 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 187
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 21/199 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   +  +   N VA+KKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 32  IGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLN 90
Query: 567 Y------CDEGQNRLLVYEFMSNG--TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
                   +E Q+  LV E M      V        + ++ L   +      G+ +LH  
Sbjct: 91  VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLH-- 143
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               IIH D+KP NI++      +I DFGLA+  T   S   T    T+ Y APE    M
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 679 PITVKVDVYSYGVLLLEII 697
                VD++S G ++ E++
Sbjct: 201 GYKENVDIWSVGCIMGEMV 219

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 36  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 95  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 148
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 149 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 196
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 30  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 142
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 190
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 35  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 93
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 94  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 147
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 148 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 195
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 27  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 85
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 86  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 139
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 140 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 187
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 22/201 (10%)
Query: 509 LGRGAFGTVY----------KGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHH 558
           LG+G+FG V+          +    M       +K  + V    E++   EVN      H
Sbjct: 32  LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN------H 85
Query: 559 KNLVRLLGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
             +V+L  Y  + + +L L+ +F+  G + + L   SK       ++   +A     L  
Sbjct: 86  PFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALALDH 141
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                II+ D+KP+NILLD+  + +++DFGL+K  ++D      +  GT  Y+APE    
Sbjct: 142 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK-ESIDHEKKAYSFCGTVEYMAPEVVNR 200
Query: 678 MPITVKVDVYSYGVLLLEIIC 698
              T   D +S+GVL+ E++ 
Sbjct: 201 RGHTQSADWWSFGVLMFEMLT 221

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 21/199 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   +  +   N VA+KKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 32  IGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLN 90
Query: 567 Y------CDEGQNRLLVYEFMSNG--TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
                   +E Q+  LV E M      V        + ++ L   +      G+ +LH  
Sbjct: 91  VFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLC-----GIKHLH-- 143
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               IIH D+KP NI++      +I DFGLA+  T   S   T    T+ Y APE    M
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 679 PITVKVDVYSYGVLLLEII 697
                VD++S G ++ E++
Sbjct: 201 GYKENVDIWSVGCIMGEMV 219

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 93/207 (44%), Gaps = 31/207 (14%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 30  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 142
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRG---TKGYVAPEW 674
                IIH D+KP N+ +++    +I DFGLA+       HT+  + G   T+ Y APE 
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGXVATRWYRAPEI 193
Query: 675 FRN-MPITVKVDVYSYGVLLLEIICLR 700
             N M     VD++S G ++ E++  R
Sbjct: 194 MLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 28  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 86
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 87  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 140
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 141 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 188
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 49  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 107
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 161
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 162 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 209
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 50  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 108
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 162
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 163 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 210
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 92/202 (45%), Gaps = 9/202 (4%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVK--KLNSVFQDSEKEFK-AEVNGIGQTHHKNLVRLL 565
           LG+G+FG V       G+    AVK  K + V QD + E    E   +        +  L
Sbjct: 349 LGKGSFGKVMLS-ERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 566 GYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
             C +  +RL  V E+++ G +   +    +         A  IA GLF+L  +    II
Sbjct: 408 HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GII 464
Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKV 684
           + D+K  N++LD   + +I+DFG+ K    D   T     GT  Y+APE     P    V
Sbjct: 465 YRDLKLDNVMLDSEGHIKIADFGMCKENIWD-GVTTKXFCGTPDYIAPEIIAYQPYGKSV 523
Query: 685 DVYSYGVLLLEIICLRRNIDNE 706
           D +++GVLL E++  +   + E
Sbjct: 524 DWWAFGVLLYEMLAGQAPFEGE 545

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 26  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 84
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 85  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 138
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 139 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 186
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 509 LGRGAFGTVYKGF-VNMGSSNHVAVKKLN---SVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG GAFGTVYKG  +  G    + V  +    +    + KE   E   +    + ++ RL
Sbjct: 57  LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQ 622
           LG C     +L+  + M  G +  ++  + K N   +  +   + IA G+ YL +    +
Sbjct: 117 LGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR---R 171
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           ++H D+  +N+L+    + +I+DFGLAKLL  ++   +       G V  +W     I  
Sbjct: 172 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVPIKWMALESILH 227
Query: 683 KV-----DVYSYGVLLLEII 697
           ++     DV+SYGV + E++
Sbjct: 228 RIYTHQSDVWSYGVTVWELM 247

>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 25/219 (11%)
Query: 510 GRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLVRLLGYC 568
            RG FG V+K  +    ++ VAVK      QD +  + + E+       H+NL++ +   
Sbjct: 24  ARGRFGCVWKAQL---MNDFVAVKIFP--LQDKQSWQSEREIFSTPGMKHENLLQFIAAE 78
Query: 569 DEGQNR----LLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEEC--C-- 620
             G N      L+  F   G++  +L G+    W     +A  ++ GL YLHE+   C  
Sbjct: 79  KRGSNLEVELWLITAFHDKGSLTDYLKGNII-TWNELCHVAETMSRGLSYLHEDVPWCRG 137
Query: 621 ----TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR-GTKGYVAPEWF 675
                 I H D K +N+LL     A ++DFGLA      +   +T  + GT+ Y+APE  
Sbjct: 138 EGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVL 197
Query: 676 RNM-----PITVKVDVYSYGVLLLEIICLRRNIDNEISK 709
                      +++D+Y+ G++L E++   +  D  + +
Sbjct: 198 EGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDE 236

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 53  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 111
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 165
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 166 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 213
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 5/143 (3%)
Query: 579 EFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH 638
           E M  G++   L    +   ++  ++++ +  GL YL E+   QI+H D+KP NIL++  
Sbjct: 94  EHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSR 151
Query: 639 YNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC 698
              ++ DFG++  L    S  N+ + GT+ Y+APE  +    +V+ D++S G+ L+E+  
Sbjct: 152 GEIKLCDFGVSGQLI--DSMANSFV-GTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAV 208
Query: 699 LRRNIDNEISKVDKAILTDWAYD 721
            R  I    +K  +AI      D
Sbjct: 209 GRYPIPPPDAKELEAIFGRPVVD 231

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 98/198 (49%), Gaps = 17/198 (8%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRL 564
           E++G G +G VYK   + G    VA+K++    +D      A  E++ + + HH N+V L
Sbjct: 27  EKVGEGTYGVVYKAKDSQGRI--VALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSL 84
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM---GIAGGLFYLHEECCT 621
           +      +   LV+EFM           D        ++I +    +  G+ + H+    
Sbjct: 85  IDVIHSERCLTLVFEFMEKDLKKVL---DENKTGLQDSQIKIYLYQLLRGVAHCHQH--- 138
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD-QSHTNTAIRGTKGYVAPEWFR-NMP 679
           +I+H D+KPQN+L++     +++DFGLA+   +  +S+T+  +  T  Y AP+    +  
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV--TLWYRAPDVLMGSKK 196
Query: 680 ITVKVDVYSYGVLLLEII 697
            +  VD++S G +  E+I
Sbjct: 197 YSTSVDIWSIGCIFAEMI 214

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 8/193 (4%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS--EKEFKAEVNGIGQTHHKNLVRLL 565
           ++G G++G V+K   N  +   VA+KK      D   +K    E+  + Q  H NLV LL
Sbjct: 10  KIGEGSYGVVFKC-RNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLL 68
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
                 +   LV+E+  +  +             L   I       + + H+  C   IH
Sbjct: 69  EVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNC---IH 125
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR-NMPITVKV 684
            D+KP+NIL+  H   ++ DFG A+LLT    + +  +  T+ Y +PE    +      V
Sbjct: 126 RDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV-ATRWYRSPELLVGDTQYGPPV 184
Query: 685 DVYSYGVLLLEII 697
           DV++ G +  E++
Sbjct: 185 DVWAIGCVFAELL 197

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 62/198 (31%), Positives = 93/198 (46%), Gaps = 19/198 (9%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   F  +   N VAVKKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 30  IGSGAQGIVCAAFDTVLGIN-VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLN 88
Query: 567 Y------CDEGQNRLLVYEFM-SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEEC 619
                   +E Q+  LV E M +N      +  D +    L  ++  GI     +LH   
Sbjct: 89  VFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIK----HLH--- 141
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP 679
              IIH D+KP NI++      +I DFGLA+  T   +   T    T+ Y APE    M 
Sbjct: 142 SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TASTNFMMTPYVVTRYYRAPEVILGMG 199
Query: 680 ITVKVDVYSYGVLLLEII 697
               VD++S G ++ E++
Sbjct: 200 YKENVDIWSVGCIMGELV 217

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 62.4 bits (150), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 90/194 (46%), Gaps = 14/194 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVA----VKKLNSVFQDSEKEFKAEVNGIGQTHHKNLV 562
           EELG+GAF  V +      +  + A     KKL++  +D +K  + E        H N+V
Sbjct: 37  EELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSA--RDHQK-LEREARICRLLKHPNIV 93
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           RL     E     LV++ ++ G +   +      +    +     I   + ++H+     
Sbjct: 94  RLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQH---D 150
Query: 623 IIHCDIKPQNILLDDHYNA---RISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP 679
           I+H D+KP+N+LL         +++DFGLA  +  +Q        GT GY++PE  R  P
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQ-AWFGFAGTPGYLSPEVLRKDP 209
Query: 680 ITVKVDVYSYGVLL 693
               VD+++ GV+L
Sbjct: 210 YGKPVDIWACGVIL 223

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 102/198 (51%), Gaps = 16/198 (8%)
Query: 509 LGRGAFGTVYKG-FVNMGSSNH--VAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG GAFGTVYKG ++  G      VA+K+L  +    + KE   E   +    + ++ RL
Sbjct: 27  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQ 622
           LG C     +L++ + M  G +  ++  + K N   +  +   + IA G+ YL +    +
Sbjct: 87  LGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR---R 141
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMP 679
           ++H D+  +N+L+    + +I+DFG AKLL  ++   +    G K    ++A E   +  
Sbjct: 142 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA--EGGKVPIKWMALESILHRI 199
Query: 680 ITVKVDVYSYGVLLLEII 697
            T + DV+SYGV + E++
Sbjct: 200 YTHQSDVWSYGVTVWELM 217

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 94/190 (49%), Gaps = 11/190 (5%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           E LG G FG V+K      +   +A K + +     ++E K E++ + Q  H NL++L  
Sbjct: 95  EILGGGRFGQVHK-CEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYD 153
Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG-IAGGLFYLHEECCTQIIH 625
             +   + +LV E++  G +   +  +S    +L T + M  I  G+ ++H+     I+H
Sbjct: 154 AFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQ---MYILH 210
Query: 626 CDIKPQNILL--DDHYNARISDFGLAKLLT-LDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            D+KP+NIL    D    +I DFGLA+     ++   N    GT  ++APE      ++ 
Sbjct: 211 LDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF---GTPEFLAPEVVNYDFVSF 267
Query: 683 KVDVYSYGVL 692
             D++S GV+
Sbjct: 268 PTDMWSVGVI 277

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   +  +   N VA+KKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 32  IGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLN 90
Query: 567 Y------CDEGQNRLLVYEFM-SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEEC 619
                   +E Q+  +V E M +N +    +  D +    L  ++ +GI     +LH   
Sbjct: 91  VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIK----HLH--- 143
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP 679
              IIH D+KP NI++      +I DFGLA+  T   S   T    T+ Y APE    M 
Sbjct: 144 SAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 680 ITVKVDVYSYGVLLLEII 697
               VD++S G ++ E+I
Sbjct: 202 YKENVDIWSVGCIMGEMI 219

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 16/199 (8%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHV--AVK--KLNSVFQDSEKEFKAEVNGIGQTHHKNLV 562
           ++LG GA+G V    +      HV  A+K  +  SV   S  +   EV  +    H N++
Sbjct: 43  KKLGSGAYGEV---LLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIM 99
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           +L  + ++ +N  LV E    G +   +    K N      I   +  G+ YLH+     
Sbjct: 100 KLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKH---N 156
Query: 623 IIHCDIKPQNILLDDHYN---ARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP 679
           I+H D+KP+N+LL+        +I DFGL+ +   +Q      + GT  Y+APE  R   
Sbjct: 157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE-NQKKMKERL-GTAYYIAPEVLRK-K 213
Query: 680 ITVKVDVYSYGVLLLEIIC 698
              K DV+S GV+L  ++ 
Sbjct: 214 YDEKCDVWSIGVILFILLA 232

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 102/198 (51%), Gaps = 16/198 (8%)
Query: 509 LGRGAFGTVYKG-FVNMGSSNH--VAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           L  GAFGTVYKG ++  G      VA+K+L  +    + KE   E   +    + ++ RL
Sbjct: 30  LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQ 622
           LG C     +L++ + M  G +  ++  + K N   +  +   + IA G+ YL +    +
Sbjct: 90  LGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR---R 144
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMP 679
           ++H D+  +N+L+    + +I+DFGLAKLL  ++   +    G K    ++A E   +  
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALESILHRI 202
Query: 680 ITVKVDVYSYGVLLLEII 697
            T + DV+SYGV + E++
Sbjct: 203 YTHQSDVWSYGVTVWELM 220

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 98/198 (49%), Gaps = 17/198 (8%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRL 564
           E++G G +G VYK   + G    VA+K++    +D      A  E++ + + HH N+V L
Sbjct: 27  EKVGEGTYGVVYKAKDSQGRI--VALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSL 84
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM---GIAGGLFYLHEECCT 621
           +      +   LV+EFM           D        ++I +    +  G+ + H+    
Sbjct: 85  IDVIHSERCLTLVFEFMEKDLKKVL---DENKTGLQDSQIKIYLYQLLRGVAHCHQH--- 138
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD-QSHTNTAIRGTKGYVAPEWFR-NMP 679
           +I+H D+KPQN+L++     +++DFGLA+   +  +S+T+  +  T  Y AP+    +  
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV--TLWYRAPDVLMGSKK 196
Query: 680 ITVKVDVYSYGVLLLEII 697
            +  VD++S G +  E+I
Sbjct: 197 YSTSVDIWSIGCIFAEMI 214

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 36  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 94
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 95  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 148
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT+  +    GYVA  W+R 
Sbjct: 149 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEM---TGYVATRWYRA 196
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 16/195 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS------EKEFKAEVNGIGQTHHKNLV 562
           LG+G FG VY   +     +H  V  L  +F+        E + + E+      HH N++
Sbjct: 31  LGKGKFGNVY---LAREKKSHFIVA-LKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNIL 86
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           RL  Y  + +   L+ E+   G +   L      + +    I   +A  L Y H +   +
Sbjct: 87  RLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGK---K 143
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +IH DIKP+N+LL      +I+DFG +       S     + GT  Y+ PE         
Sbjct: 144 VIHRDIKPENLLLGLKGELKIADFGWS---VHAPSLRRKTMCGTLDYLPPEMIEGRMHNE 200
Query: 683 KVDVYSYGVLLLEII 697
           KVD++  GVL  E++
Sbjct: 201 KVDLWCIGVLCYELL 215

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 102/198 (51%), Gaps = 16/198 (8%)
Query: 509 LGRGAFGTVYKG-FVNMGSSNH--VAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG GAFGTVYKG ++  G      VA+K+L  +    + KE   E   +    + ++ RL
Sbjct: 25  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQ 622
           LG C     +L++ + M  G +  ++  + K N   +  +   + IA G+ YL +    +
Sbjct: 85  LGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR---R 139
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMP 679
           ++H D+  +N+L+    + +I+DFG AKLL  ++   +    G K    ++A E   +  
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA--EGGKVPIKWMALESILHRI 197
Query: 680 ITVKVDVYSYGVLLLEII 697
            T + DV+SYGV + E++
Sbjct: 198 YTHQSDVWSYGVTVWELM 215

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 27/218 (12%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E        E++ + + +H N+
Sbjct: 8   EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 63
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV----ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+E +         AS L G   P   L       +  GL + H 
Sbjct: 64  VKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 120
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD-QSHTNTAIRGTKGYVAPEWFR 676
               +++H D+KPQN+L++     +++DFGLA+   +  +++T+  +  T  Y APE   
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILL 175
Query: 677 NMP-ITVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
                +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 212

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 12/199 (6%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNS---VFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           +G+G+FG V     N  +    A+K +N    V ++  +    E+  +    H  LV L 
Sbjct: 23  IGKGSFGKVCIVQKN-DTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLW 81
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
               + ++  +V + +  G +   L  +     +        +   L YL  +   +IIH
Sbjct: 82  YSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ---RIIH 138
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF---RNMPITV 682
            D+KP NILLD+H +  I+DF +A +L  +   T  A  GTK Y+APE F   +    + 
Sbjct: 139 RDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMA--GTKPYMAPEMFSSRKGAGYSF 196
Query: 683 KVDVYSYGVLLLEIICLRR 701
            VD +S GV   E++  RR
Sbjct: 197 AVDWWSLGVTAYELLRGRR 215

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 91/194 (46%), Gaps = 14/194 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAV----KKLNSVFQDSEKEFKAEVNGIGQTHHKNLV 562
           EELG+GAF  V +    +    + A+    KKL++  +D +K  + E        H N+V
Sbjct: 17  EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSA--RDHQK-LEREARICRLLKHPNIV 73
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           RL     E  +  L+++ ++ G +   +      +    +     I   + + H+     
Sbjct: 74  RLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ---MG 130
Query: 623 IIHCDIKPQNILLDDHYNA---RISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP 679
           ++H ++KP+N+LL         +++DFGLA  +  +Q        GT GY++PE  R  P
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ-AWFGFAGTPGYLSPEVLRKDP 189
Query: 680 ITVKVDVYSYGVLL 693
               VD+++ GV+L
Sbjct: 190 YGKPVDLWACGVIL 203

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 92/210 (43%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 37  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 96  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 149
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT   +    GYVA  W+R 
Sbjct: 150 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTADEM---TGYVATRWYRA 197
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 509 LGRGAFGTVY--KGFVNMGSSNHVAVKKLNSVFQDSEKE-FKAEVNGIGQTHHKNLVRLL 565
           LG+G+FG V   K  +  G    V V     V Q ++KE    EV  + Q  H N+++L 
Sbjct: 40  LGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 98
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
            + ++     LV E  + G +   +    + +      I   +  G+ Y+H+    +I+H
Sbjct: 99  EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK---NKIVH 155
Query: 626 CDIKPQNILLDDH---YNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            D+KP+N+LL+      N RI DFGL+      +   +    GT  Y+APE         
Sbjct: 156 RDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI--GTAYYIAPEVLHG-TYDE 212
Query: 683 KVDVYSYGVLLLEII--CLRRNIDNE---ISKVDKAILT 716
           K DV+S GV+L  ++  C   N  NE   + KV+K   T
Sbjct: 213 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT 251

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 102/198 (51%), Gaps = 16/198 (8%)
Query: 509 LGRGAFGTVYKG-FVNMGSSNH--VAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG GAFGTVYKG ++  G      VA+K+L  +    + KE   E   +    + ++ RL
Sbjct: 25  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQ 622
           LG C     +L++ + M  G +  ++  + K N   +  +   + IA G+ YL +    +
Sbjct: 85  LGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR---R 139
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMP 679
           ++H D+  +N+L+    + +I+DFG AKLL  ++   +    G K    ++A E   +  
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA--EGGKVPIKWMALESILHRI 197
Query: 680 ITVKVDVYSYGVLLLEII 697
            T + DV+SYGV + E++
Sbjct: 198 YTHQSDVWSYGVTVWELM 215

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 21/199 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   +  +   N VA+KKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 70  IGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN 128
Query: 567 Y------CDEGQNRLLVYEFMSNG--TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
                   +E Q+  LV E M      V        + ++ L   +      G+ +LH  
Sbjct: 129 VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHS- 182
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               IIH D+KP NI++      +I DFGLA+  T   S   T    T+ Y APE    M
Sbjct: 183 --AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 238
Query: 679 PITVKVDVYSYGVLLLEII 697
                VD++S G ++ E++
Sbjct: 239 GYKENVDIWSVGCIMGEMV 257

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 99/200 (49%), Gaps = 20/200 (10%)
Query: 509 LGRGAFGTVYKG-FVNMGSSNH--VAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           L  GAFGTVYKG ++  G      VA+K+L  +    + KE   E   +    + ++ RL
Sbjct: 23  LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQ 622
           LG C     +L+  + M  G +  ++  + K N   +  +   + IA G+ YL +    +
Sbjct: 83  LGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR---R 137
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           ++H D+  +N+L+    + +I+DFGLAKLL  ++   +       G V  +W     I  
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVPIKWMALESILH 193
Query: 683 KV-----DVYSYGVLLLEII 697
           ++     DV+SYGV + E++
Sbjct: 194 RIYTHQSDVWSYGVTVWELM 213

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 92/202 (45%), Gaps = 9/202 (4%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVK--KLNSVFQDSEKE-FKAEVNGIGQTHHKNLVRLL 565
           LG+G+FG V       G+    AVK  K + V QD + E    E   +        +  L
Sbjct: 28  LGKGSFGKVMLS-ERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 566 GYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
             C +  +RL  V E+++ G +   +    +         A  IA GLF+L  +    II
Sbjct: 87  HSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG---II 143
Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKV 684
           + D+K  N++LD   + +I+DFG+ K    D   T     GT  Y+APE     P    V
Sbjct: 144 YRDLKLDNVMLDSEGHIKIADFGMCKENIWD-GVTTKXFCGTPDYIAPEIIAYQPYGKSV 202
Query: 685 DVYSYGVLLLEIICLRRNIDNE 706
           D +++GVLL E++  +   + E
Sbjct: 203 DWWAFGVLLYEMLAGQAPFEGE 224

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 495 YKELVEVTRGF--KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG 552
           ++  ++ T G+  KE++G G++ +V K  ++  ++   AVK ++   +D  +E +  +  
Sbjct: 14  HRNSIQFTDGYEVKEDIGVGSY-SVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLR- 71
Query: 553 IGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGL 612
            GQ  H N++ L    D+G+   +V E    G +   +      + +  + +   I   +
Sbjct: 72  YGQ--HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTV 129
Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHY----NARISDFGLAKLLTLDQSHTNTAIRGTKG 668
            YLH +    ++H D+KP NIL  D      + RI DFG AK L  +     T    T  
Sbjct: 130 EYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY-TAN 185
Query: 669 YVAPEWFRNMPITVKVDVYSYGVLL 693
           +VAPE           D++S GVLL
Sbjct: 186 FVAPEVLERQGYDAACDIWSLGVLL 210

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 92/210 (43%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 37  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 96  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 149
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT   +    GYVA  W+R 
Sbjct: 150 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTADEM---TGYVATRWYRA 197
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 507 EELGRGAFGTVYKGFVNM-GSSNHVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLVRL 564
           ++LG GA+G V      + G+   + + K +SV   S       EV  + Q  H N+++L
Sbjct: 27  KKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 86
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
             + ++ +N  LV E    G +   +    K +      I   +  G  YLH+     I+
Sbjct: 87  YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKH---NIV 143
Query: 625 HCDIKPQNILLDDHYN---ARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT 681
           H D+KP+N+LL+        +I DFGL+    +          GT  Y+APE  R     
Sbjct: 144 HRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL--GTAYYIAPEVLRK-KYD 200
Query: 682 VKVDVYSYGVLLLEIIC 698
            K DV+S GV+L  ++C
Sbjct: 201 EKCDVWSCGVILYILLC 217

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 101/198 (51%), Gaps = 16/198 (8%)
Query: 509 LGRGAFGTVYKG-FVNMGSSNH--VAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           L  GAFGTVYKG ++  G      VA+K+L  +    + KE   E   +    + ++ RL
Sbjct: 30  LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQ 622
           LG C     +L+  + M  G +  ++  + K N   +  +   + IA G+ YL +    +
Sbjct: 90  LGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR---R 144
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMP 679
           ++H D+  +N+L+    + +I+DFGLAKLL  ++   +    G K    ++A E   +  
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALESILHRI 202
Query: 680 ITVKVDVYSYGVLLLEII 697
            T + DV+SYGV + E++
Sbjct: 203 YTHQSDVWSYGVTVWELM 220

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 101/198 (51%), Gaps = 16/198 (8%)
Query: 509 LGRGAFGTVYKG-FVNMGSSNH--VAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG GAFGTVYKG ++  G      VA+K+L  +    + KE   E   +    + ++ RL
Sbjct: 25  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQ 622
           LG C     +L+  + M  G +  ++  + K N   +  +   + IA G+ YL +    +
Sbjct: 85  LGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR---R 139
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMP 679
           ++H D+  +N+L+    + +I+DFG AKLL  ++   +    G K    ++A E   +  
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA--EGGKVPIKWMALESILHRI 197
Query: 680 ITVKVDVYSYGVLLLEII 697
            T + DV+SYGV + E++
Sbjct: 198 YTHQSDVWSYGVTVWELM 215

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/219 (22%), Positives = 98/219 (44%), Gaps = 26/219 (11%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRL 564
           E++G G +GTV+K   N  +   VA+K++     D      A  E+  + +  HKN+VRL
Sbjct: 8   EKIGEGTYGTVFKA-KNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL 66
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
                  +   LV+EF        F   +   + ++       +  GL + H      ++
Sbjct: 67  HDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVL 123
Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPI---- 680
           H D+KPQN+L++ +   +++DFGLA+   +        +R     V   W+R   +    
Sbjct: 124 HRDLKPQNLLINRNGELKLADFGLARAFGI-------PVRCYSAEVVTLWYRPPDVLFGA 176
Query: 681 ---TVKVDVYSYGVLLLEIICLRR------NIDNEISKV 710
              +  +D++S G +  E+    R      ++D+++ ++
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRI 215

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 92/210 (43%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 37  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 95
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 96  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 149
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DFGLA+       HT   +    GYVA  W+R 
Sbjct: 150 --SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTADEM---TGYVATRWYRA 197
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 30  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 142
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I D+GLA+       HT+  +    GYVA  W+R 
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDYGLAR-------HTDDEM---TGYVATRWYRA 190
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 17/197 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   +  +   N VA+KKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 32  IGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN 90
Query: 567 Y------CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECC 620
                   +E Q+  LV E M             + + +  + +   +  G+ +LH    
Sbjct: 91  VFTPQKTLEEFQDVYLVMELMDANLXQVI---QMELDHERMSYLLYQMLXGIKHLH---S 144
Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPI 680
             IIH D+KP NI++      +I DFGLA+  T   S   T    T+ Y APE    M  
Sbjct: 145 AGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 681 TVKVDVYSYGVLLLEII 697
              VD++S G ++ E++
Sbjct: 203 KENVDIWSVGCIMGEMV 219

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 89/191 (46%), Gaps = 13/191 (6%)
Query: 509 LGRGAFGTVY--KGFVNMGSSNHVAVKKLNSVFQDSEKE-FKAEVNGIGQTHHKNLVRLL 565
           LG+G+FG V   K  +  G    V V     V Q ++KE    EV  + Q  H N+++L 
Sbjct: 34  LGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
            + ++     LV E  + G +   +    + +      I   +  G+ Y+H+    +I+H
Sbjct: 93  EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK---NKIVH 149
Query: 626 CDIKPQNILLDDH---YNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            D+KP+N+LL+      N RI DFGL+      +   +    GT  Y+APE         
Sbjct: 150 RDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI--GTAYYIAPEVLHG-TYDE 206
Query: 683 KVDVYSYGVLL 693
           K DV+S GV+L
Sbjct: 207 KCDVWSTGVIL 217

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 17/197 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   +  +   N VA+KKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 25  IGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN 83
Query: 567 Y------CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECC 620
                   +E Q+  LV E M             + + +  + +   +  G+ +LH    
Sbjct: 84  VFTPQKTLEEFQDVYLVMELMDANLXQVI---QMELDHERMSYLLYQMLXGIKHLH---S 137
Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPI 680
             IIH D+KP NI++      +I DFGLA+  T   S   T    T+ Y APE    M  
Sbjct: 138 AGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGY 195
Query: 681 TVKVDVYSYGVLLLEII 697
              VD++S G ++ E++
Sbjct: 196 KENVDIWSVGCIMGEMV 212

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 101/223 (45%), Gaps = 37/223 (16%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-----EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E        E++ + + +H N+
Sbjct: 12  EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 67
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV----ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V+LL          LV+E +         AS L G   P   L       +  GL + H 
Sbjct: 68  VKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLP---LIKSYLFQLLQGLAFCHS 124
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
               +++H D+KPQN+L++     +++DFGLA+            +R     V   W+R 
Sbjct: 125 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-------GVPVRTYXHEVVTLWYRA 174
Query: 678 MPI-------TVKVDVYSYGVLLLEIICLRRNI---DNEISKV 710
             I       +  VD++S G +  E++  RR +   D+EI ++
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQL 216

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 101/198 (51%), Gaps = 16/198 (8%)
Query: 509 LGRGAFGTVYKG-FVNMGSSNH--VAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG GAFGTVYKG ++  G      VA+K+L  +    + KE   E   +    + ++ RL
Sbjct: 23  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQ 622
           LG C     +L+  + M  G +  ++  + K N   +  +   + IA G+ YL +    +
Sbjct: 83  LGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR---R 137
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMP 679
           ++H D+  +N+L+    + +I+DFG AKLL  ++   +    G K    ++A E   +  
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA--EGGKVPIKWMALESILHRI 195
Query: 680 ITVKVDVYSYGVLLLEII 697
            T + DV+SYGV + E++
Sbjct: 196 YTHQSDVWSYGVTVWELM 213

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 21/199 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   +  +   N VA+KKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 33  IGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN 91
Query: 567 Y------CDEGQNRLLVYEFMSNG--TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
                   +E Q+  LV E M      V        + ++ L   +      G+ +LH  
Sbjct: 92  VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHS- 145
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               IIH D+KP NI++      +I DFGLA+  T   S   T    T+ Y APE    M
Sbjct: 146 --AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 201
Query: 679 PITVKVDVYSYGVLLLEII 697
                VD++S G ++ E++
Sbjct: 202 GYKENVDIWSVGCIMGEMV 220

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 16/200 (8%)
Query: 508 ELGRGAFGTVY---KGFVNMGSSNHVAVKKLNSVFQDSEKE-FKAEVNGIGQTHHKNLVR 563
           +LG G FG V        N G+   VAVK L        +  ++ E+  +   +H+++V+
Sbjct: 15  DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 74
Query: 564 LLGYC-DEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
             G C D+G+  + LV E++  G++  +L        +L    A  I  G+ YLH +   
Sbjct: 75  YKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL-FAQQICEGMAYLHAQ--- 130
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG----YVAPEWFRN 677
             IH  +  +N+LLD+    +I DFGLAK   + + H    +R        + APE  + 
Sbjct: 131 HYIHRALAARNVLLDNDRLVKIGDFGLAK--AVPEGHEYYRVREDGDSPVFWYAPECLKE 188
Query: 678 MPITVKVDVYSYGVLLLEII 697
                  DV+S+GV L E++
Sbjct: 189 CKFYYASDVWSFGVTLYELL 208

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 18/196 (9%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRL 564
           +ELGRG F  V +  ++  +    A K L      QD   E   E+  +     K+  R+
Sbjct: 35  KELGRGKFAVV-RQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELA--KSCPRV 91
Query: 565 LGYCDEGQNR---LLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--GIAGGLFYLHEEC 619
           +   +  +N    +L+ E+ + G + S    +          I +   I  G++YLH+  
Sbjct: 92  INLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ-- 149
Query: 620 CTQIIHCDIKPQNILLDDHY---NARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR 676
              I+H D+KPQNILL   Y   + +I DFG+++   +  +     I GT  Y+APE   
Sbjct: 150 -NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR--KIGHACELREIMGTPEYLAPEILN 206
Query: 677 NMPITVKVDVYSYGVL 692
             PIT   D+++ G++
Sbjct: 207 YDPITTATDMWNIGII 222

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 21/199 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   +  +   N VA+KKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 32  IGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN 90
Query: 567 Y------CDEGQNRLLVYEFMSNG--TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
                   +E Q+  LV E M      V        + ++ L   +      G+ +LH  
Sbjct: 91  VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHS- 144
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               IIH D+KP NI++      +I DFGLA+  T   S   T    T+ Y APE    M
Sbjct: 145 --AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 679 PITVKVDVYSYGVLLLEII 697
                VD++S G ++ E++
Sbjct: 201 GYKENVDIWSVGCIMGEMV 219

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 21/199 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   +  +   N VA+KKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 32  IGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN 90
Query: 567 Y------CDEGQNRLLVYEFMSNG--TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
                   +E Q+  LV E M      V        + ++ L   +      G+ +LH  
Sbjct: 91  VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHS- 144
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               IIH D+KP NI++      +I DFGLA+  T   S   T    T+ Y APE    M
Sbjct: 145 --AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 679 PITVKVDVYSYGVLLLEII 697
                VD++S G ++ E++
Sbjct: 201 GYKENVDIWSVGCIMGEMV 219

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 94/200 (47%), Gaps = 16/200 (8%)
Query: 508 ELGRGAFGTVY---KGFVNMGSSNHVAVKKLNSVFQDSEKE-FKAEVNGIGQTHHKNLVR 563
           +LG G FG V        N G+   VAVK L        +  ++ E+  +   +H+++V+
Sbjct: 16  DLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 75
Query: 564 LLGYC-DEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
             G C D+G+  + LV E++  G++  +L        +L    A  I  G+ YLH +   
Sbjct: 76  YKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL-FAQQICEGMAYLHAQ--- 131
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG----YVAPEWFRN 677
             IH  +  +N+LLD+    +I DFGLAK   + + H    +R        + APE  + 
Sbjct: 132 HYIHRALAARNVLLDNDRLVKIGDFGLAK--AVPEGHEYYRVREDGDSPVFWYAPECLKE 189
Query: 678 MPITVKVDVYSYGVLLLEII 697
                  DV+S+GV L E++
Sbjct: 190 CKFYYASDVWSFGVTLYELL 209

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 21/199 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   +  +   N VA+KKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 33  IGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN 91
Query: 567 Y------CDEGQNRLLVYEFMSNG--TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
                   +E Q+  LV E M      V        + ++ L   +      G+ +LH  
Sbjct: 92  VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHS- 145
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               IIH D+KP NI++      +I DFGLA+  T   S   T    T+ Y APE    M
Sbjct: 146 --AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 201
Query: 679 PITVKVDVYSYGVLLLEII 697
                VD++S G ++ E++
Sbjct: 202 GYKENVDIWSVGCIMGEMV 220

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 90/201 (44%), Gaps = 19/201 (9%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS--EKEFKAEVNGIGQTHHKNLVRL 564
           + +G GA+G V    V+  +   VA+KKL   FQ     K    E+  +    H+N++ L
Sbjct: 31  QPVGSGAYGAVCSA-VDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGL 89
Query: 565 LGY------CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
           L         D+  +  LV  FM  GT    L    K        +   +  GL Y+H  
Sbjct: 90  LDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH-- 145
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN- 677
               IIH D+KP N+ +++    +I DFGLA+    D       +  T+ Y APE   N 
Sbjct: 146 -AAGIIHRDLKPGNLAVNEDCELKILDFGLAR--QADSEMXGXVV--TRWYRAPEVILNW 200
Query: 678 MPITVKVDVYSYGVLLLEIIC 698
           M  T  VD++S G ++ E+I 
Sbjct: 201 MRYTQTVDIWSVGCIMAEMIT 221

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 21/199 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   +  +   N VA+KKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 31  IGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN 89
Query: 567 Y------CDEGQNRLLVYEFMSNG--TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
                   +E Q+  LV E M      V        + ++ L   +      G+ +LH  
Sbjct: 90  VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHS- 143
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               IIH D+KP NI++      +I DFGLA+  T   S   T    T+ Y APE    M
Sbjct: 144 --AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 199
Query: 679 PITVKVDVYSYGVLLLEII 697
                VD++S G ++ E++
Sbjct: 200 GYKENVDIWSVGCIMGEMV 218

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 98/206 (47%), Gaps = 9/206 (4%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLN--SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           ELG G  G V+K  V+   S  V  +KL    +      +   E+  + + +   +V   
Sbjct: 13  ELGAGNGGVVFK--VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY 70
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           G         +  E M  G++   L    +   ++  ++++ +  GL YL E+   +I+H
Sbjct: 71  GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMH 128
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D+KP NIL++     ++ DFG++  L    S  N+ + GT+ Y++PE  +    +V+ D
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSFV-GTRSYMSPERLQGTHYSVQSD 185
Query: 686 VYSYGVLLLEIICLRRNIDNEISKVD 711
           ++S G+ L+E+   R  I    +K D
Sbjct: 186 IWSMGLSLVEMAVGRYPIPPPDAKED 211

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 94/194 (48%), Gaps = 10/194 (5%)
Query: 509 LGRGAFGTVYKGFV--NMGSSNHVAVKKLNS-VFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           LG G FG VY+G    + G   +VAVK        D++++F +E   +    H ++V+L+
Sbjct: 16  LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQI 623
           G  +E +   ++ E    G +  +L   +K + K+ T +  ++ I   + YL    C   
Sbjct: 76  GIIEE-EPTWIIMELYPYGELGHYL-ERNKNSLKVLTLVLYSLQICKAMAYLESINC--- 130
Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVK 683
           +H DI  +NIL+      ++ DFGL++ +  +  +  +  R    +++PE       T  
Sbjct: 131 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA 190
Query: 684 VDVYSYGVLLLEII 697
            DV+ + V + EI+
Sbjct: 191 SDVWMFAVCMWEIL 204

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 101/198 (51%), Gaps = 16/198 (8%)
Query: 509 LGRGAFGTVYKG-FVNMGSSNH--VAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG GAFGTVYKG ++  G      VA+K+L  +    + KE   E   +    + ++ RL
Sbjct: 30  LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQ 622
           LG C     +L+  + M  G +  ++  + K N   +  +   + IA G+ YL +    +
Sbjct: 90  LGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDR---R 144
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---GYVAPEWFRNMP 679
           ++H D+  +N+L+    + +I+DFG AKLL  ++   +    G K    ++A E   +  
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA--EGGKVPIKWMALESILHRI 202
Query: 680 ITVKVDVYSYGVLLLEII 697
            T + DV+SYGV + E++
Sbjct: 203 YTHQSDVWSYGVTVWELM 220

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 21/199 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   +  +   N VA+KKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 26  IGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN 84
Query: 567 Y------CDEGQNRLLVYEFMSNG--TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
                   +E Q+  LV E M      V        + ++ L   +      G+ +LH  
Sbjct: 85  VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHS- 138
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               IIH D+KP NI++      +I DFGLA+  T   S   T    T+ Y APE    M
Sbjct: 139 --AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 194
Query: 679 PITVKVDVYSYGVLLLEII 697
                VD++S G ++ E++
Sbjct: 195 GYKENVDIWSVGCIMGEMV 213

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 21/199 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   +  +   N VA+KKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 70  IGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN 128
Query: 567 Y------CDEGQNRLLVYEFMSNG--TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
                   +E Q+  LV E M      V        + ++ L   +      G+ +LH  
Sbjct: 129 VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHS- 182
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               IIH D+KP NI++      +I DFGLA+  T   S   T    T+ Y APE    M
Sbjct: 183 --AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 238
Query: 679 PITVKVDVYSYGVLLLEII 697
                VD++S G ++ E++
Sbjct: 239 GYKENVDIWSVGCIMGEMV 257

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 41/214 (19%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-FQDSEKEFKAEVNGIGQTHHKNLVRL--- 564
           +G GA+G V   + N+     VA+KK++    Q   +    E+  + +  H+N++ +   
Sbjct: 35  IGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDI 93
Query: 565 ---------------LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIA 609
                              +    +LL  + +SN  +  FL+                I 
Sbjct: 94  IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------IL 138
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN--TAIRGTK 667
            GL Y+H      ++H D+KP N+LL+   + +I DFGLA++   D  HT   T    T+
Sbjct: 139 RGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 668 GYVAPEWFRNMP-ITVKVDVYSYGVLLLEIICLR 700
            Y APE   N    T  +D++S G +L E++  R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 21/199 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   +  +   N VA+KKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 25  IGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN 83
Query: 567 Y------CDEGQNRLLVYEFMSNG--TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
                   +E Q+  LV E M      V        + ++ L   +      G+ +LH  
Sbjct: 84  VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHS- 137
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               IIH D+KP NI++      +I DFGLA+  T   S   T    T+ Y APE    M
Sbjct: 138 --AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 193
Query: 679 PITVKVDVYSYGVLLLEII 697
                VD++S G ++ E++
Sbjct: 194 GYKENVDIWSVGCIMGEMV 212

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 21/199 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   +  +   N VA+KKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 26  IGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN 84
Query: 567 Y------CDEGQNRLLVYEFMSNG--TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
                   +E Q+  LV E M      V        + ++ L   +      G+ +LH  
Sbjct: 85  VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHS- 138
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               IIH D+KP NI++      +I DFGLA+  T   S   T    T+ Y APE    M
Sbjct: 139 --AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 194
Query: 679 PITVKVDVYSYGVLLLEII 697
                VD++S G ++ E++
Sbjct: 195 GYKENVDIWSVGCIMGEMV 213

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 94/194 (48%), Gaps = 10/194 (5%)
Query: 509 LGRGAFGTVYKGFV--NMGSSNHVAVKKLNS-VFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           LG G FG VY+G    + G   +VAVK        D++++F +E   +    H ++V+L+
Sbjct: 32  LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQI 623
           G  +E +   ++ E    G +  +L   +K + K+ T +  ++ I   + YL    C   
Sbjct: 92  GIIEE-EPTWIIMELYPYGELGHYL-ERNKNSLKVLTLVLYSLQICKAMAYLESINC--- 146
Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVK 683
           +H DI  +NIL+      ++ DFGL++ +  +  +  +  R    +++PE       T  
Sbjct: 147 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA 206
Query: 684 VDVYSYGVLLLEII 697
            DV+ + V + EI+
Sbjct: 207 SDVWMFAVCMWEIL 220

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 94/198 (47%), Gaps = 19/198 (9%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   +  +   N VA+KKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 32  IGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLN 90
Query: 567 Y------CDEGQNRLLVYEFM-SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEEC 619
                   +E Q+  +V E M +N +    +  D +    L  ++  GI     +LH   
Sbjct: 91  VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIK----HLH--- 143
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP 679
              IIH D+KP NI++      +I DFGLA+  T   S   T    T+ Y APE    M 
Sbjct: 144 SAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 680 ITVKVDVYSYGVLLLEII 697
               VD++S G ++ E+I
Sbjct: 202 YKENVDIWSVGCIMGEMI 219

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 91/200 (45%), Gaps = 21/200 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   +  +   N VA+KKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 32  IGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN 90
Query: 567 Y------CDEGQNRLLVYEFMSNG--TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
                   +E Q+  +V E M      V        + ++ L   +      G+ +LH  
Sbjct: 91  VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHS- 144
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               IIH D+KP NI++      +I DFGLA+  T   S        T+ Y APE    M
Sbjct: 145 --AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEVVTRYYRAPEVILGM 200
Query: 679 PITVKVDVYSYGVLLLEIIC 698
                VD++S G ++ E++C
Sbjct: 201 GYKENVDIWSVGCIMGEMVC 220

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 89/191 (46%), Gaps = 13/191 (6%)
Query: 509 LGRGAFGTVY--KGFVNMGSSNHVAVKKLNSVFQDSEKE-FKAEVNGIGQTHHKNLVRLL 565
           LG+G+FG V   K  +  G    V V     V Q ++KE    EV  + Q  H N+++L 
Sbjct: 57  LGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
            + ++     LV E  + G +   +    + +      I   +  G+ Y+H+    +I+H
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK---NKIVH 172
Query: 626 CDIKPQNILLDDH---YNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            D+KP+N+LL+      N RI DFGL+      +   +    GT  Y+APE         
Sbjct: 173 RDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI--GTAYYIAPEVLHG-TYDE 229
Query: 683 KVDVYSYGVLL 693
           K DV+S GV+L
Sbjct: 230 KCDVWSTGVIL 240

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  + + VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 30  VGSGAYGSVCAAF-DTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 142
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I DF LA+       HT+  +    GYVA  W+R 
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDFYLAR-------HTDDEM---TGYVATRWYRA 190
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 101/219 (46%), Gaps = 18/219 (8%)
Query: 509 LGRGAFGTVY--KGFVNMGSSNHVAVKKLNSVFQDSEKE-FKAEVNGIGQTHHKNLVRLL 565
           LG+G+FG V   K  +  G    V V     V Q ++KE    EV  + Q  H N+++L 
Sbjct: 58  LGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
            + ++     LV E  + G +   +    + +      I   +  G+ Y+H+    +I+H
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK---NKIVH 173
Query: 626 CDIKPQNILLDDH---YNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            D+KP+N+LL+      N RI DFGL+      +   +    GT  Y+APE         
Sbjct: 174 RDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI--GTAYYIAPEVLHG-TYDE 230
Query: 683 KVDVYSYGVLLLEII--CLRRNIDNE---ISKVDKAILT 716
           K DV+S GV+L  ++  C   N  NE   + KV+K   T
Sbjct: 231 KCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT 269

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 94/194 (48%), Gaps = 10/194 (5%)
Query: 509 LGRGAFGTVYKGFV--NMGSSNHVAVKKLNS-VFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           LG G FG VY+G    + G   +VAVK        D++++F +E   +    H ++V+L+
Sbjct: 20  LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCTQI 623
           G  +E +   ++ E    G +  +L   +K + K+ T +  ++ I   + YL    C   
Sbjct: 80  GIIEE-EPTWIIMELYPYGELGHYL-ERNKNSLKVLTLVLYSLQICKAMAYLESINC--- 134
Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVK 683
           +H DI  +NIL+      ++ DFGL++ +  +  +  +  R    +++PE       T  
Sbjct: 135 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTA 194
Query: 684 VDVYSYGVLLLEII 697
            DV+ + V + EI+
Sbjct: 195 SDVWMFAVCMWEIL 208

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 9/198 (4%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLN--SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           ELG G  G V+K  V+   S  V  +KL    +      +   E+  + + +   +V   
Sbjct: 75  ELGAGNGGVVFK--VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY 132
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           G         +  E M  G++   L    +   ++  ++++ +  GL YL E+   +I+H
Sbjct: 133 GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMH 190
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D+KP NIL++     ++ DFG++  L    S  N+ + GT+ Y++PE  +    +V+ D
Sbjct: 191 RDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSFV-GTRSYMSPERLQGTHYSVQSD 247
Query: 686 VYSYGVLLLEIICLRRNI 703
           ++S G+ L+E+   R  I
Sbjct: 248 IWSMGLSLVEMAVGRYPI 265

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 10/192 (5%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNS--VFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           EELG+GAF  V +  + + +    A K +N+  +     ++ + E        H N+VRL
Sbjct: 10  EELGKGAFSVVRR-CMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRL 68
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
                E     LV++ ++ G +   +      +    +     I   + + H      I+
Sbjct: 69  HDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCH---LNGIV 125
Query: 625 HCDIKPQNILLDDHYNA---RISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT 681
           H D+KP+N+LL         +++DFGLA  +  DQ        GT GY++PE  R  P  
Sbjct: 126 HRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLSPEVLRKDPYG 184
Query: 682 VKVDVYSYGVLL 693
             VD+++ GV+L
Sbjct: 185 KPVDMWACGVIL 196

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 28/219 (12%)
Query: 502 TRGF------KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV---------FQDSEKEF 546
           T GF      KE LGRG   +V +  ++  +    AVK ++            Q+  +  
Sbjct: 12  THGFYENYEPKEILGRGV-SSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 70
Query: 547 KAEVNGIGQTH-HKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIA 605
             EV+ + +   H N+++L    +      LV++ M  G +  +L      + K   +I 
Sbjct: 71  LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 130
Query: 606 MGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRG 665
             +   +  LH+     I+H D+KP+NILLDD  N +++DFG +    LD      ++ G
Sbjct: 131 RALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEKLRSVCG 185
Query: 666 TKGYVAPEWFR-----NMPITVK-VDVYSYGVLLLEIIC 698
           T  Y+APE        N P   K VD++S GV++  ++ 
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 100/206 (48%), Gaps = 20/206 (9%)
Query: 509 LGRGAFGTVYKGFVNM--GSSNHVAVKKLNS--VFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG+G FG+V +  +    GS   VAVK L +  +     +EF  E   + +  H ++ +L
Sbjct: 31  LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL 90
Query: 565 LGYCDEGQNR------LLVYEFMSNGTVASFLF----GDSKPNWKLRTEI--AMGIAGGL 612
           +G     + +      +++  FM +G + +FL     G++  N  L+T +   + IA G+
Sbjct: 91  VGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGM 150
Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLA-KLLTLDQSHTNTAIRGTKGYVA 671
            YL        IH D+  +N +L +     ++DFGL+ K+ + D      A +    ++A
Sbjct: 151 EYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLA 207
Query: 672 PEWFRNMPITVKVDVYSYGVLLLEII 697
            E   +   TV  DV+++GV + EI+
Sbjct: 208 LESLADNLYTVHSDVWAFGVTMWEIM 233

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 21/199 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   +  +   N VA+KKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 32  IGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN 90
Query: 567 Y------CDEGQNRLLVYEFMSNG--TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
                   +E Q+  +V E M      V        + ++ L   +      G+ +LH  
Sbjct: 91  VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLH-- 143
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               IIH D+KP NI++      +I DFGLA+  T   S   T    T+ Y APE    M
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 679 PITVKVDVYSYGVLLLEII 697
                VD++S G ++ E+I
Sbjct: 201 GYKENVDIWSVGCIMGEMI 219

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 21/199 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   +  +   N VA+KKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 33  IGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN 91
Query: 567 Y------CDEGQNRLLVYEFMSNG--TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
                   +E Q+  +V E M      V        + ++ L   +      G+ +LH  
Sbjct: 92  VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLH-- 144
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               IIH D+KP NI++      +I DFGLA+  T   S   T    T+ Y APE    M
Sbjct: 145 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 201
Query: 679 PITVKVDVYSYGVLLLEII 697
                VD++S G ++ E+I
Sbjct: 202 GYKENVDIWSVGCIMGEMI 220

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 21/199 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   +  +   N VA+KKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 32  IGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN 90
Query: 567 Y------CDEGQNRLLVYEFMSN--GTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
                   +E Q+  +V E M      V        + ++ L   +      G+ +LH  
Sbjct: 91  VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLC-----GIKHLH-- 143
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               IIH D+KP NI++      +I DFGLA+  T   S   T    T+ Y APE    M
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 679 PITVKVDVYSYGVLLLEII 697
                VD++S G ++ E+I
Sbjct: 201 GYKENVDIWSVGCIMGEMI 219

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 108/227 (47%), Gaps = 30/227 (13%)
Query: 482 DQGVSYMNLRCFTYKELVEVTRGFKEELGRGAFGTVYK----GFVNMGSSNHVAVKKLNS 537
           ++G   +   CF   EL+ V       LG+G +G V++       N G    + V K   
Sbjct: 8   NRGPEKIRPECF---ELLRV-------LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAM 57
Query: 538 VFQDSE--KEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFL----- 590
           + ++++     KAE N + +  H  +V L+     G    L+ E++S G +   L     
Sbjct: 58  IVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGI 117
Query: 591 FGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK 650
           F +    + L  EI+M +     +LH++    II+ D+KP+NI+L+   + +++DFGL K
Sbjct: 118 FMEDTACFYL-AEISMALG----HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK 169
Query: 651 LLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEII 697
               D + T+T   GT  Y+APE          VD +S G L+ +++
Sbjct: 170 ESIHDGTVTHTFC-GTIEYMAPEILMRSGHNRAVDWWSLGALMYDML 215

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 17/196 (8%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK---AEVNGIGQTHHKNLVRL 564
           E+G G+FG VY    ++ +S  VA+KK++   + S ++++    EV  + +  H N ++ 
Sbjct: 22  EIGHGSFGAVYFA-RDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 80
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR-TEIAMGIAGGLFYLHEECCTQI 623
            G         LV E+   G+ +  L    KP  ++    +  G   GL YLH      +
Sbjct: 81  RGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NM 136
Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM---PI 680
           IH D+K  NILL +    ++ DFG A ++            GT  ++APE    M     
Sbjct: 137 IHRDVKAGNILLSEPGLVKLGDFGSASIMA-----PANXFVGTPYWMAPEVILAMDEGQY 191
Query: 681 TVKVDVYSYGVLLLEI 696
             KVDV+S G+  +E+
Sbjct: 192 DGKVDVWSLGITCIEL 207

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 9/198 (4%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLN--SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           ELG G  G V+K  V+   S  V  +KL    +      +   E+  + + +   +V   
Sbjct: 13  ELGAGNGGVVFK--VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY 70
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           G         +  E M  G++   L    +   ++  ++++ +  GL YL E+   +I+H
Sbjct: 71  GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMH 128
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D+KP NIL++     ++ DFG++  L    S  N+ + GT+ Y++PE  +    +V+ D
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSFV-GTRSYMSPERLQGTHYSVQSD 185
Query: 686 VYSYGVLLLEIICLRRNI 703
           ++S G+ L+E+   R  I
Sbjct: 186 IWSMGLSLVEMAVGRYPI 203

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 9/198 (4%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLN--SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           ELG G  G V+K  V+   S  V  +KL    +      +   E+  + + +   +V   
Sbjct: 13  ELGAGNGGVVFK--VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY 70
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           G         +  E M  G++   L    +   ++  ++++ +  GL YL E+   +I+H
Sbjct: 71  GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMH 128
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D+KP NIL++     ++ DFG++  L    S  N+ + GT+ Y++PE  +    +V+ D
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSFV-GTRSYMSPERLQGTHYSVQSD 185
Query: 686 VYSYGVLLLEIICLRRNI 703
           ++S G+ L+E+   R  I
Sbjct: 186 IWSMGLSLVEMAVGRYPI 203

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 21/199 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   +  +   N VA+KKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 32  IGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN 90
Query: 567 Y------CDEGQNRLLVYEFMSNG--TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
                   +E Q+  +V E M      V        + ++ L   +      G+ +LH  
Sbjct: 91  VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLH-- 143
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               IIH D+KP NI++      +I DFGLA+  T   S   T    T+ Y APE    M
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 200
Query: 679 PITVKVDVYSYGVLLLEII 697
                VD++S G ++ E+I
Sbjct: 201 GYKENVDIWSVGCIMGEMI 219

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 10/192 (5%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNS--VFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           EELG+GAF  V +  + + +    A K +N+  +     ++ + E        H N+VRL
Sbjct: 10  EELGKGAFSVVRR-CMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRL 68
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
                E     LV++ ++ G +   +      +    +     I   + + H      I+
Sbjct: 69  HDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCH---LNGIV 125
Query: 625 HCDIKPQNILLDDHYNA---RISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT 681
           H D+KP+N+LL         +++DFGLA  +  DQ        GT GY++PE  R  P  
Sbjct: 126 HRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLSPEVLRKDPYG 184
Query: 682 VKVDVYSYGVLL 693
             VD+++ GV+L
Sbjct: 185 KPVDMWACGVIL 196

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 17/196 (8%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK---AEVNGIGQTHHKNLVRL 564
           E+G G+FG VY    ++ +S  VA+KK++   + S ++++    EV  + +  H N ++ 
Sbjct: 61  EIGHGSFGAVYFA-RDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 119
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR-TEIAMGIAGGLFYLHEECCTQI 623
            G         LV E+   G+ +  L    KP  ++    +  G   GL YLH      +
Sbjct: 120 RGCYLREHTAWLVMEY-CLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NM 175
Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM---PI 680
           IH D+K  NILL +    ++ DFG A ++            GT  ++APE    M     
Sbjct: 176 IHRDVKAGNILLSEPGLVKLGDFGSASIMA-----PANXFVGTPYWMAPEVILAMDEGQY 230
Query: 681 TVKVDVYSYGVLLLEI 696
             KVDV+S G+  +E+
Sbjct: 231 DGKVDVWSLGITCIEL 246

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 9/198 (4%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLN--SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           ELG G  G V+K  V+   S  V  +KL    +      +   E+  + + +   +V   
Sbjct: 13  ELGAGNGGVVFK--VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY 70
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           G         +  E M  G++   L    +   ++  ++++ +  GL YL E+   +I+H
Sbjct: 71  GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMH 128
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D+KP NIL++     ++ DFG++  L    S  N+ + GT+ Y++PE  +    +V+ D
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSFV-GTRSYMSPERLQGTHYSVQSD 185
Query: 686 VYSYGVLLLEIICLRRNI 703
           ++S G+ L+E+   R  I
Sbjct: 186 IWSMGLSLVEMAVGRYPI 203

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 11/197 (5%)
Query: 507 EELGRGAFGTVYKGFVNM-GSSNHVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLVRL 564
           ++LG GA+G V      + G+   + + K +SV   S       EV  + Q  H N+++L
Sbjct: 10  KKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 69
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
             + ++ +N  LV E    G +   +    K +      I   +  G  YLH+     I+
Sbjct: 70  YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKH---NIV 126
Query: 625 HCDIKPQNILLDDHYN---ARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT 681
           H D+KP+N+LL+        +I DFGL+    +          GT  Y+APE  R     
Sbjct: 127 HRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL--GTAYYIAPEVLRK-KYD 183
Query: 682 VKVDVYSYGVLLLEIIC 698
            K DV+S GV+L  ++C
Sbjct: 184 EKCDVWSCGVILYILLC 200

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 9/198 (4%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLN--SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           ELG G  G V+K  V+   S  V  +KL    +      +   E+  + + +   +V   
Sbjct: 13  ELGAGNGGVVFK--VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY 70
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           G         +  E M  G++   L    +   ++  ++++ +  GL YL E+   +I+H
Sbjct: 71  GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMH 128
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D+KP NIL++     ++ DFG++  L    S  N+ + GT+ Y++PE  +    +V+ D
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSFV-GTRSYMSPERLQGTHYSVQSD 185
Query: 686 VYSYGVLLLEIICLRRNI 703
           ++S G+ L+E+   R  I
Sbjct: 186 IWSMGLSLVEMAVGRYPI 203

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 91/200 (45%), Gaps = 21/200 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   +  +   N VA+KKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 32  IGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN 90
Query: 567 Y------CDEGQNRLLVYEFMSNG--TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
                   +E Q+  +V E M      V        + ++ L   +      G+ +LH  
Sbjct: 91  VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLHS- 144
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               IIH D+KP NI++      +I DFGLA+  T   S        T+ Y APE    M
Sbjct: 145 --AGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEVVTRYYRAPEVILGM 200
Query: 679 PITVKVDVYSYGVLLLEIIC 698
                VD++S G ++ E++C
Sbjct: 201 GYKENVDLWSVGCIMGEMVC 220

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 26/213 (12%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSN---HVAVKKLNSVFQDSEKE-FKAEVN 551
           +E +E+ R     +G G FG V++G + M   N    VA+K   +   DS +E F  E  
Sbjct: 9   RERIELGRC----IGEGQFGDVHQG-IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 552 GIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIA 609
            + Q  H ++V+L+G   E     ++ E  + G + SFL    K +  L + I  A  ++
Sbjct: 64  TMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL-QVRKFSLDLASLILYAYQLS 121
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG- 668
             L YL  +   + +H DI  +N+L+  +   ++ DFGL++ +       +T  + +KG 
Sbjct: 122 TALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-----EDSTXXKASKGK 173
Query: 669 ----YVAPEWFRNMPITVKVDVYSYGVLLLEII 697
               ++APE       T   DV+ +GV + EI+
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 22/209 (10%)
Query: 506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV---------FQDSEKEFKAEVNGIGQT 556
           KE LGRG   +V +  ++  +    AVK ++            Q+  +    EV+ + + 
Sbjct: 9   KEILGRGV-SSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKV 67
Query: 557 H-HKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYL 615
             H N+++L    +      LV++ M  G +  +L      + K   +I   +   +  L
Sbjct: 68  SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICAL 127
Query: 616 HEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF 675
           H+     I+H D+KP+NILLDD  N +++DFG +    LD       + GT  Y+APE  
Sbjct: 128 HK---LNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEKLREVCGTPSYLAPEII 182
Query: 676 R-----NMPITVK-VDVYSYGVLLLEIIC 698
                 N P   K VD++S GV++  ++ 
Sbjct: 183 ECSMNDNHPGYGKEVDMWSTGVIMYTLLA 211

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/280 (22%), Positives = 118/280 (42%), Gaps = 42/280 (15%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA----EVNGIGQTHHKN 560
            ++++GRG F  VY+    +     VA+KK+  +F   + + +A    E++ + Q +H N
Sbjct: 36  IEKKIGRGQFSEVYRAACLLDGVP-VALKKVQ-IFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFL--FGDSKPNWKLRT--EIAMGIAGGLFYLH 616
           +++      E     +V E    G ++  +  F   K     RT  +  + +   L ++H
Sbjct: 94  VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153
Query: 617 EECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR 676
                +++H DIKP N+ +      ++ D GL +  +   +  ++ + GT  Y++PE   
Sbjct: 154 SR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSPERIH 209
Query: 677 NMPITVKVDVYSYGVLLLEIICL-------RRNIDNEISKVDKAILTDWAYDRYQERTLE 729
                 K D++S G LL E+  L       + N+ +   K+++        D Y E    
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSE---- 265
Query: 730 ALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKV 769
                +L  + N+            CI  DP  RP +  V
Sbjct: 266 -----ELRQLVNM------------CINPDPEKRPDVTYV 288

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 9/198 (4%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLN--SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           ELG G  G V+K  V+   S  V  +KL    +      +   E+  + + +   +V   
Sbjct: 40  ELGAGNGGVVFK--VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY 97
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           G         +  E M  G++   L    +   ++  ++++ +  GL YL E+   +I+H
Sbjct: 98  GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMH 155
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D+KP NIL++     ++ DFG++  L    S  N+ + GT+ Y++PE  +    +V+ D
Sbjct: 156 RDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSFV-GTRSYMSPERLQGTHYSVQSD 212
Query: 686 VYSYGVLLLEIICLRRNI 703
           ++S G+ L+E+   R  I
Sbjct: 213 IWSMGLSLVEMAVGRYPI 230

>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 72/290 (24%), Positives = 120/290 (41%), Gaps = 52/290 (17%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE---KEFKAEVNGIGQTHHKNLVR 563
           E +G+G FG VY G  +      VA++ L  + +D+E   K FK EV    QT H+N+V 
Sbjct: 39  ELIGKGRFGQVYHGRWH----GEVAIR-LIDIERDNEDQLKAFKREVMAYRQTRHENVVL 93
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYLHEECCT 621
            +G C    +  ++       T+ S +  D+K    +    +IA  I  G+ YLH     
Sbjct: 94  FMGACMSPPHLAIITSLCKGRTLYS-VVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AK 149
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLL-TLDQSHTNTAIRGTKGY---VAPEWFRN 677
            I+H D+K +N+  D+     I+DFGL  +   L        +R   G+   +APE  R 
Sbjct: 150 GILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQ 208
Query: 678 ---------MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTL 728
                    +P +   DV++ G +  E+                    +W    ++ +  
Sbjct: 209 LSPDTEEDKLPFSKHSDVFALGTIWYELHA-----------------REWP---FKTQPA 248
Query: 729 EALVENDLEAM----NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
           EA++      M    + + M      +  +C   +   RPT  K+  MLE
Sbjct: 249 EAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLE 298

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 94/198 (47%), Gaps = 19/198 (9%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   +  +   N VA+KKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 32  IGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN 90
Query: 567 Y------CDEGQNRLLVYEFM-SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEEC 619
                   +E Q+  +V E M +N +    +  D +    L  ++  GI     +LH   
Sbjct: 91  VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIK----HLH--- 143
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP 679
              IIH D+KP NI++      +I DFGLA+  T   S   T    T+ Y APE    M 
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 680 ITVKVDVYSYGVLLLEII 697
               VD++S G ++ E+I
Sbjct: 202 YKENVDIWSVGCIMGEMI 219

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 97/199 (48%), Gaps = 18/199 (9%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHV-AVKKLN-SVFQDSEKEFKAEVNGIGQTHH-KNLVRL 564
           E+G G  G V+K  +    + HV AVK++  S  ++  K    +++ + ++H    +V+ 
Sbjct: 32  EMGSGTCGQVWK--MRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQC 89
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYLHEECCTQ 622
            G      +  +  E M  GT A  L    +     R   ++ + I   L+YL E+    
Sbjct: 90  FGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK--HG 145
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT- 681
           +IH D+KP NILLD+    ++ DFG++  L  D++   +A  G   Y+APE       T 
Sbjct: 146 VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA--GCAAYMAPERIDPPDPTK 203
Query: 682 ----VKVDVYSYGVLLLEI 696
               ++ DV+S G+ L+E+
Sbjct: 204 PDYDIRADVWSLGISLVEL 222

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 90/205 (43%), Gaps = 26/205 (12%)
Query: 507 EELGRGAFGTVYKGFVNM--GSSNHVAVKKLN-SVFQDSEK--EFKAEVNGIGQTHHKNL 561
           E+LG G+FG V +G  +   G +  VAVK L   V    E   +F  EVN +    H+NL
Sbjct: 18  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV--------ASFLFGDSKPNWKLRTEIAMGIAGGLF 613
           +RL G       ++ V E    G++          FL G         +  A+ +A G+ 
Sbjct: 78  IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTL-------SRYAVQVAEGMG 129
Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH--TNTAIRGTKGYVA 671
           YL  +   + IH D+  +N+LL      +I DFGL + L  +  H       +    + A
Sbjct: 130 YLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 672 PEWFRNMPITVKVDVYSYGVLLLEI 696
           PE  +    +   D + +GV L E+
Sbjct: 187 PESLKTRTFSHASDTWMFGVTLWEM 211

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 21/199 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   +  +   N VA+KKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 32  IGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN 90
Query: 567 Y------CDEGQNRLLVYEFMSNG--TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
                   +E Q+  +V E M      V        + ++ L   +      G+ +LH  
Sbjct: 91  VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLH-- 143
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               IIH D+KP NI++      +I DFGLA+  T   S   T    T+ Y APE    M
Sbjct: 144 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPEVVTRYYRAPEVILGM 200
Query: 679 PITVKVDVYSYGVLLLEII 697
                VD++S G ++ E+I
Sbjct: 201 GYKENVDIWSVGCIMGEMI 219

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 41/214 (19%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-FQDSEKEFKAEVNGIGQTHHKNLVRL--- 564
           +G GA+G V   + N+     VA+KK++    Q   +    E+  + +  H+N++ +   
Sbjct: 35  IGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 565 ---------------LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIA 609
                              +    +LL  + +SN  +  FL+                I 
Sbjct: 94  IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------IL 138
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN--TAIRGTK 667
            GL Y+H      ++H D+KP N+LL+   + +I DFGLA++   D  HT   T    T+
Sbjct: 139 RGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 668 GYVAPEWFRNMP-ITVKVDVYSYGVLLLEIICLR 700
            Y APE   N    T  +D++S G +L E++  R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 10/199 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVK---KLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F + LG G+F TV      + +S   A+K   K + + ++       E + + +  H   
Sbjct: 36  FGKILGEGSFSTVVLA-RELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           V+L     + +       +  NG +  ++      +          I   L YLH +   
Sbjct: 95  VKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG-- 152
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD--QSHTNTAIRGTKGYVAPEWFRNMP 679
            IIH D+KP+NILL++  + +I+DFG AK+L+ +  Q+  N+ + GT  YV+PE      
Sbjct: 153 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSPELLTEKS 210
Query: 680 ITVKVDVYSYGVLLLEIIC 698
            +   D+++ G ++ +++ 
Sbjct: 211 ASKSSDLWALGCIIYQLVA 229

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 81/323 (25%), Positives = 142/323 (43%), Gaps = 56/323 (17%)
Query: 416 DRDETGTTFIKIRKVPSGGKKKVDVLIPVVSVLFGSSALIN--LLLVSACCLGFLVVNRK 473
           D+D  G   +KI    +G  + + V  P +++    + LI+    LV+     F++  +K
Sbjct: 279 DKDRKGMLQLKI----AGAPEPLTVTAPSLTIAENMADLIDGYCRLVNGATQSFIIRPQK 334
Query: 474 KFMRP--------HQEDQGVSYMNLRCFTYKELVEV-----------TRGF-----KEEL 509
           +  R         + E QGV    +      +  E+           TR +     + EL
Sbjct: 335 EGERALPSIPKLANNEKQGVRSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIEL 394
Query: 510 GR----GAFGTVYKGFVNMGSSN---HVAVKKLNSVFQDSEKE-FKAEVNGIGQTHHKNL 561
           GR    G FG V++G + M   N    VA+K   +   DS +E F  E   + Q  H ++
Sbjct: 395 GRCIGEGQFGDVHQG-IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 453
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEEC 619
           V+L+G   E     ++ E  + G + SFL    K +  L + I  A  ++  L YL  + 
Sbjct: 454 VKLIGVITENPV-WIIMELCTLGELRSFL-QVRKFSLDLASLILYAYQLSTALAYLESK- 510
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG-----YVAPEW 674
             + +H DI  +N+L+  +   ++ DFGL++ +       +T  + +KG     ++APE 
Sbjct: 511 --RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-----EDSTYYKASKGKLPIKWMAPES 563
Query: 675 FRNMPITVKVDVYSYGVLLLEII 697
                 T   DV+ +GV + EI+
Sbjct: 564 INFRRFTSASDVWMFGVCMWEIL 586

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 90/205 (43%), Gaps = 26/205 (12%)
Query: 507 EELGRGAFGTVYKGFVNM--GSSNHVAVKKLN-SVFQDSEK--EFKAEVNGIGQTHHKNL 561
           E+LG G+FG V +G  +   G +  VAVK L   V    E   +F  EVN +    H+NL
Sbjct: 14  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV--------ASFLFGDSKPNWKLRTEIAMGIAGGLF 613
           +RL G       ++ V E    G++          FL G         +  A+ +A G+ 
Sbjct: 74  IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTL-------SRYAVQVAEGMG 125
Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH--TNTAIRGTKGYVA 671
           YL  +   + IH D+  +N+LL      +I DFGL + L  +  H       +    + A
Sbjct: 126 YLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 672 PEWFRNMPITVKVDVYSYGVLLLEI 696
           PE  +    +   D + +GV L E+
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEM 207

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 88/192 (45%), Gaps = 10/192 (5%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNS--VFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           E++G+GAF  V +  V + + +  A K +N+  +     ++ + E        H N+VRL
Sbjct: 10  EDIGKGAFSVVRR-CVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRL 68
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
                E     LV++ ++ G +   +      +    +     I   + + H+     ++
Sbjct: 69  HDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ---MGVV 125
Query: 625 HCDIKPQNILLDDHYNA---RISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT 681
           H D+KP+N+LL         +++DFGLA  +  DQ        GT GY++PE  R     
Sbjct: 126 HRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQ-AWFGFAGTPGYLSPEVLRKEAYG 184
Query: 682 VKVDVYSYGVLL 693
             VD+++ GV+L
Sbjct: 185 KPVDIWACGVIL 196

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 119/289 (41%), Gaps = 48/289 (16%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKL------------NSVFQDSE 543
           +E  E        LG+G FGTV+ G   +     VA+K +            +SV    E
Sbjct: 26  REAFEAEYRLGPLLGKGGFGTVFAGH-RLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLE 84
Query: 544 KEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTE 603
                +V   G   H  ++RLL + +  +  +LV E       A  LF        L   
Sbjct: 85  VALLWKVGAGGG--HPGVIRLLDWFETQEGFMLVLE---RPLPAQDLFDYITEKGPLGEG 139
Query: 604 IAMGIAGGLFYLHEECCTQ-IIHCDIKPQNILLDDHYN-ARISDFGLAKLLTLDQSHTNT 661
            +    G +    + C ++ ++H DIK +NIL+D     A++ DFG   LL  D+ +T+ 
Sbjct: 140 PSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLH-DEPYTD- 197
Query: 662 AIRGTKGYVAPEWF-RNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAY 720
              GT+ Y  PEW  R+    +   V+S G+LL +++C                  D  +
Sbjct: 198 -FDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVC-----------------GDIPF 239
Query: 721 DRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKV 769
           +R QE  LEA +        +   L R       C+   PS RP++ ++
Sbjct: 240 ERDQE-ILEAELHFPAHVSPDCCALIRR------CLAPKPSSRPSLEEI 281

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 90/205 (43%), Gaps = 26/205 (12%)
Query: 507 EELGRGAFGTVYKGFVNM--GSSNHVAVKKLN-SVFQDSEK--EFKAEVNGIGQTHHKNL 561
           E+LG G+FG V +G  +   G +  VAVK L   V    E   +F  EVN +    H+NL
Sbjct: 14  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV--------ASFLFGDSKPNWKLRTEIAMGIAGGLF 613
           +RL G       ++ V E    G++          FL G         +  A+ +A G+ 
Sbjct: 74  IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTL-------SRYAVQVAEGMG 125
Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH--TNTAIRGTKGYVA 671
           YL  +   + IH D+  +N+LL      +I DFGL + L  +  H       +    + A
Sbjct: 126 YLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCA 182
Query: 672 PEWFRNMPITVKVDVYSYGVLLLEI 696
           PE  +    +   D + +GV L E+
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEM 207

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 99/219 (45%), Gaps = 28/219 (12%)
Query: 502 TRGF------KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV---------FQDSEKEF 546
           T GF      KE LGRG   +V +  ++  +    AVK ++            Q+  +  
Sbjct: 12  THGFYENYEPKEILGRGV-SSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 70
Query: 547 KAEVNGIGQTH-HKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIA 605
             EV+ + +   H N+++L    +      LV++ M  G +  +L      + K   +I 
Sbjct: 71  LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 130
Query: 606 MGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRG 665
             +   +  LH+     I+H D+KP+NILLDD  N +++DFG +    LD       + G
Sbjct: 131 RALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDPGEKLREVCG 185
Query: 666 TKGYVAPEWFR-----NMPITVK-VDVYSYGVLLLEIIC 698
           T  Y+APE        N P   K VD++S GV++  ++ 
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 90/206 (43%), Gaps = 26/206 (12%)
Query: 507 EELGRGAFGTVYKGFVNM--GSSNHVAVKKLN-SVFQDSEK--EFKAEVNGIGQTHHKNL 561
           E+LG G+FG V +G  +   G +  VAVK L   V    E   +F  EVN +    H+NL
Sbjct: 24  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV--------ASFLFGDSKPNWKLRTEIAMGIAGGLF 613
           +RL G       ++ V E    G++          FL G         +  A+ +A G+ 
Sbjct: 84  IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTL-------SRYAVQVAEGMG 135
Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH--TNTAIRGTKGYVA 671
           YL  +   + IH D+  +N+LL      +I DFGL + L  +  H       +    + A
Sbjct: 136 YLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCA 192
Query: 672 PEWFRNMPITVKVDVYSYGVLLLEII 697
           PE  +    +   D + +GV L E+ 
Sbjct: 193 PESLKTRTFSHASDTWMFGVTLWEMF 218

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 90/206 (43%), Gaps = 26/206 (12%)
Query: 507 EELGRGAFGTVYKGFVNM--GSSNHVAVKKLN-SVFQDSEK--EFKAEVNGIGQTHHKNL 561
           E+LG G+FG V +G  +   G +  VAVK L   V    E   +F  EVN +    H+NL
Sbjct: 24  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV--------ASFLFGDSKPNWKLRTEIAMGIAGGLF 613
           +RL G       ++ V E    G++          FL G         +  A+ +A G+ 
Sbjct: 84  IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTL-------SRYAVQVAEGMG 135
Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH--TNTAIRGTKGYVA 671
           YL  +   + IH D+  +N+LL      +I DFGL + L  +  H       +    + A
Sbjct: 136 YLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 192
Query: 672 PEWFRNMPITVKVDVYSYGVLLLEII 697
           PE  +    +   D + +GV L E+ 
Sbjct: 193 PESLKTRTFSHASDTWMFGVTLWEMF 218

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 26/213 (12%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSN---HVAVKKLNSVFQDSEKE-FKAEVN 551
           +E +E+ R     +G G FG V++G + M   N    VA+K   +   DS +E F  E  
Sbjct: 9   RERIELGRC----IGEGQFGDVHQG-IYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 552 GIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIA 609
            + Q  H ++V+L+G   E     ++ E  + G + SFL    K +  L + I  A  ++
Sbjct: 64  TMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLS 121
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG- 668
             L YL  +   + +H DI  +N+L+  +   ++ DFGL++ +       +T  + +KG 
Sbjct: 122 TALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-----EDSTYYKASKGK 173
Query: 669 ----YVAPEWFRNMPITVKVDVYSYGVLLLEII 697
               ++APE       T   DV+ +GV + EI+
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 26/213 (12%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSN---HVAVKKLNSVFQDSEKE-FKAEVN 551
           +E +E+ R     +G G FG V++G + M   N    VA+K   +   DS +E F  E  
Sbjct: 9   RERIELGRC----IGEGQFGDVHQG-IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 552 GIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIA 609
            + Q  H ++V+L+G   E     ++ E  + G + SFL    K +  L + I  A  ++
Sbjct: 64  TMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLS 121
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG- 668
             L YL  +   + +H DI  +N+L+  +   ++ DFGL++ +       +T  + +KG 
Sbjct: 122 TALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-----EDSTYYKASKGK 173
Query: 669 ----YVAPEWFRNMPITVKVDVYSYGVLLLEII 697
               ++APE       T   DV+ +GV + EI+
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 26/213 (12%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSN---HVAVKKLNSVFQDSEKE-FKAEVN 551
           +E +E+ R     +G G FG V++G + M   N    VA+K   +   DS +E F  E  
Sbjct: 37  RERIELGRC----IGEGQFGDVHQG-IYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 91
Query: 552 GIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIA 609
            + Q  H ++V+L+G   E     ++ E  + G + SFL    K +  L + I  A  ++
Sbjct: 92  TMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLS 149
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG- 668
             L YL  +   + +H DI  +N+L+  +   ++ DFGL++ +       +T  + +KG 
Sbjct: 150 TALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-----EDSTYYKASKGK 201
Query: 669 ----YVAPEWFRNMPITVKVDVYSYGVLLLEII 697
               ++APE       T   DV+ +GV + EI+
Sbjct: 202 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 90/205 (43%), Gaps = 26/205 (12%)
Query: 507 EELGRGAFGTVYKGFVNM--GSSNHVAVKKLN-SVFQDSEK--EFKAEVNGIGQTHHKNL 561
           E+LG G+FG V +G  +   G +  VAVK L   V    E   +F  EVN +    H+NL
Sbjct: 14  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV--------ASFLFGDSKPNWKLRTEIAMGIAGGLF 613
           +RL G       ++ V E    G++          FL G         +  A+ +A G+ 
Sbjct: 74  IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTL-------SRYAVQVAEGMG 125
Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH--TNTAIRGTKGYVA 671
           YL  +   + IH D+  +N+LL      +I DFGL + L  +  H       +    + A
Sbjct: 126 YLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 182
Query: 672 PEWFRNMPITVKVDVYSYGVLLLEI 696
           PE  +    +   D + +GV L E+
Sbjct: 183 PESLKTRTFSHASDTWMFGVTLWEM 207

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 41/214 (19%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-FQDSEKEFKAEVNGIGQTHHKNLVRL--- 564
           +G GA+G V   + N+     VA+KK++    Q   +    E+  + +  H+N++ +   
Sbjct: 31  IGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 565 ---------------LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIA 609
                              +    +LL  + +SN  +  FL+                I 
Sbjct: 90  IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------IL 134
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN--TAIRGTK 667
            GL Y+H      ++H D+KP N+LL+   + +I DFGLA++   D  HT   T    T+
Sbjct: 135 RGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 668 GYVAPEWFRNMP-ITVKVDVYSYGVLLLEIICLR 700
            Y APE   N    T  +D++S G +L E++  R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 92/210 (43%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 30  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 142
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I D GLA+       HT+  +    GYVA  W+R 
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDAGLAR-------HTDDEM---TGYVATRWYRA 190
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 92/210 (43%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 30  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 142
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I  FGLA+       HT+  +    GYVA  W+R 
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILGFGLAR-------HTDDEM---TGYVATRWYRA 190
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 90/205 (43%), Gaps = 26/205 (12%)
Query: 507 EELGRGAFGTVYKGFVNM--GSSNHVAVKKLN-SVFQDSEK--EFKAEVNGIGQTHHKNL 561
           E+LG G+FG V +G  +   G +  VAVK L   V    E   +F  EVN +    H+NL
Sbjct: 18  EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV--------ASFLFGDSKPNWKLRTEIAMGIAGGLF 613
           +RL G       ++ V E    G++          FL G         +  A+ +A G+ 
Sbjct: 78  IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTL-------SRYAVQVAEGMG 129
Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH--TNTAIRGTKGYVA 671
           YL  +   + IH D+  +N+LL      +I DFGL + L  +  H       +    + A
Sbjct: 130 YLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCA 186
Query: 672 PEWFRNMPITVKVDVYSYGVLLLEI 696
           PE  +    +   D + +GV L E+
Sbjct: 187 PESLKTRTFSHASDTWMFGVTLWEM 211

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 41/214 (19%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-FQDSEKEFKAEVNGIGQTHHKNLVRL--- 564
           +G GA+G V   + N+     VA+KK++    Q   +    E+  + +  H+N++ +   
Sbjct: 31  IGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 565 ---------------LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIA 609
                              +    +LL  + +SN  +  FL+                I 
Sbjct: 90  IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------IL 134
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN--TAIRGTK 667
            GL Y+H      ++H D+KP N+LL+   + +I DFGLA++   D  HT   T    T+
Sbjct: 135 RGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATR 191
Query: 668 GYVAPEWFRNMP-ITVKVDVYSYGVLLLEIICLR 700
            Y APE   N    T  +D++S G +L E++  R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 26/213 (12%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSN---HVAVKKLNSVFQDSEKE-FKAEVN 551
           +E +E+ R     +G G FG V++G + M   N    VA+K   +   DS +E F  E  
Sbjct: 14  RERIELGRC----IGEGQFGDVHQG-IYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 68
Query: 552 GIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIA 609
            + Q  H ++V+L+G   E     ++ E  + G + SFL    K +  L + I  A  ++
Sbjct: 69  TMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLS 126
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG- 668
             L YL  +   + +H DI  +N+L+  +   ++ DFGL++ +       +T  + +KG 
Sbjct: 127 TALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-----EDSTYYKASKGK 178
Query: 669 ----YVAPEWFRNMPITVKVDVYSYGVLLLEII 697
               ++APE       T   DV+ +GV + EI+
Sbjct: 179 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 26/213 (12%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSN---HVAVKKLNSVFQDSEKE-FKAEVN 551
           +E +E+ R     +G G FG V++G + M   N    VA+K   +   DS +E F  E  
Sbjct: 11  RERIELGRC----IGEGQFGDVHQG-IYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 65
Query: 552 GIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIA 609
            + Q  H ++V+L+G   E     ++ E  + G + SFL    K +  L + I  A  ++
Sbjct: 66  TMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLS 123
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG- 668
             L YL  +   + +H DI  +N+L+  +   ++ DFGL++ +       +T  + +KG 
Sbjct: 124 TALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-----EDSTYYKASKGK 175
Query: 669 ----YVAPEWFRNMPITVKVDVYSYGVLLLEII 697
               ++APE       T   DV+ +GV + EI+
Sbjct: 176 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 41/214 (19%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-FQDSEKEFKAEVNGIGQTHHKNLVRL--- 564
           +G GA+G V   + N+     VA+KK++    Q   +    E+  + +  H+N++ +   
Sbjct: 36  IGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 94
Query: 565 ---------------LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIA 609
                              +    +LL  + +SN  +  FL+                I 
Sbjct: 95  IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------IL 139
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN--TAIRGTK 667
            GL Y+H      ++H D+KP N+LL+   + +I DFGLA++   D  HT   T    T+
Sbjct: 140 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 196
Query: 668 GYVAPEWFRNMP-ITVKVDVYSYGVLLLEIICLR 700
            Y APE   N    T  +D++S G +L E++  R
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 41/214 (19%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-FQDSEKEFKAEVNGIGQTHHKNLVRL--- 564
           +G GA+G V   + N+     VA+KK++    Q   +    E+  + +  H+N++ +   
Sbjct: 37  IGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 95
Query: 565 ---------------LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIA 609
                              +    +LL  + +SN  +  FL+                I 
Sbjct: 96  IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------IL 140
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN--TAIRGTK 667
            GL Y+H      ++H D+KP N+LL+   + +I DFGLA++   D  HT   T    T+
Sbjct: 141 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 197
Query: 668 GYVAPEWFRNMP-ITVKVDVYSYGVLLLEIICLR 700
            Y APE   N    T  +D++S G +L E++  R
Sbjct: 198 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 41/214 (19%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-FQDSEKEFKAEVNGIGQTHHKNLVRL--- 564
           +G GA+G V   + N+     VA+KK++    Q   +    E+  + +  H+N++ +   
Sbjct: 28  IGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 86
Query: 565 ---------------LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIA 609
                              +    +LL  + +SN  +  FL+                I 
Sbjct: 87  IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------IL 131
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN--TAIRGTK 667
            GL Y+H      ++H D+KP N+LL+   + +I DFGLA++   D  HT   T    T+
Sbjct: 132 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 188
Query: 668 GYVAPEWFRNMP-ITVKVDVYSYGVLLLEIICLR 700
            Y APE   N    T  +D++S G +L E++  R
Sbjct: 189 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 26/213 (12%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSN---HVAVKKLNSVFQDSEKE-FKAEVN 551
           +E +E+ R     +G G FG V++G + M   N    VA+K   +   DS +E F  E  
Sbjct: 6   RERIELGRC----IGEGQFGDVHQG-IYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 60
Query: 552 GIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIA 609
            + Q  H ++V+L+G   E     ++ E  + G + SFL    K +  L + I  A  ++
Sbjct: 61  TMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLS 118
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG- 668
             L YL  +   + +H DI  +N+L+  +   ++ DFGL++ +       +T  + +KG 
Sbjct: 119 TALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-----EDSTYYKASKGK 170
Query: 669 ----YVAPEWFRNMPITVKVDVYSYGVLLLEII 697
               ++APE       T   DV+ +GV + EI+
Sbjct: 171 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 41/214 (19%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-FQDSEKEFKAEVNGIGQTHHKNLVRL--- 564
           +G GA+G V   + N+     VA+KK++    Q   +    E+  + +  H+N++ +   
Sbjct: 35  IGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 565 ---------------LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIA 609
                              +    +LL  + +SN  +  FL+                I 
Sbjct: 94  IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------IL 138
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN--TAIRGTK 667
            GL Y+H      ++H D+KP N+LL+   + +I DFGLA++   D  HT   T    T+
Sbjct: 139 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 668 GYVAPEWFRNMP-ITVKVDVYSYGVLLLEIICLR 700
            Y APE   N    T  +D++S G +L E++  R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 103/213 (48%), Gaps = 26/213 (12%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSN---HVAVKKLNSVFQDSEKE-FKAEVN 551
           +E +E+ R     +G G FG V++G + M   N    VA+K   +   DS +E F  E  
Sbjct: 12  RERIELGRC----IGEGQFGDVHQG-IYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 66
Query: 552 GIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIA 609
            + Q  H ++V+L+G   E     ++ E  + G + SFL    K +  L + I  A  ++
Sbjct: 67  TMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLS 124
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG- 668
             L YL  +   + +H DI  +N+L+  +   ++ DFGL++ +       +T  + +KG 
Sbjct: 125 TALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM-----EDSTYYKASKGK 176
Query: 669 ----YVAPEWFRNMPITVKVDVYSYGVLLLEII 697
               ++APE       T   DV+ +GV + EI+
Sbjct: 177 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 92/210 (43%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 30  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 142
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I D GLA+       HT+  +    GYVA  W+R 
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDRGLAR-------HTDDEM---TGYVATRWYRA 190
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 41/214 (19%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-FQDSEKEFKAEVNGIGQTHHKNLVRL--- 564
           +G GA+G V   + N+     VA+KK++    Q   +    E+  + +  H+N++ +   
Sbjct: 29  IGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 87
Query: 565 ---------------LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIA 609
                              +    +LL  + +SN  +  FL+                I 
Sbjct: 88  IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------IL 132
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN--TAIRGTK 667
            GL Y+H      ++H D+KP N+LL+   + +I DFGLA++   D  HT   T    T+
Sbjct: 133 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 668 GYVAPEWFRNMP-ITVKVDVYSYGVLLLEIICLR 700
            Y APE   N    T  +D++S G +L E++  R
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 104/224 (46%), Gaps = 29/224 (12%)
Query: 495 YKELVEVTRGFKEE---------LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE 545
           Y+++V+  RG + +         +GRGAFG V    V   +S  V   KL S F+  ++ 
Sbjct: 60  YEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQ--LVRHKASQKVYAMKLLSKFEMIKRS 117
Query: 546 ----FKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR 601
               F  E + +   +   +V+L     + +   +V E+M  G + + +     P  K  
Sbjct: 118 DSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPE-KWA 176
Query: 602 TEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS---H 658
                 +   L  +H      +IH D+KP N+LLD H + +++DFG    + +D++   H
Sbjct: 177 KFYTAEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTC--MKMDETGMVH 231
Query: 659 TNTAIRGTKGYVAPEWFRNMP----ITVKVDVYSYGVLLLEIIC 698
            +TA+ GT  Y++PE  ++         + D +S GV L E++ 
Sbjct: 232 CDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLV 274

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 41/214 (19%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-FQDSEKEFKAEVNGIGQTHHKNLVRL--- 564
           +G GA+G V   + N+     VA+KK++    Q   +    E+  + +  H+N++ +   
Sbjct: 29  IGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 87
Query: 565 ---------------LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIA 609
                              +    +LL  + +SN  +  FL+                I 
Sbjct: 88  IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------IL 132
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN--TAIRGTK 667
            GL Y+H      ++H D+KP N+LL+   + +I DFGLA++   D  HT   T    T+
Sbjct: 133 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 668 GYVAPEWFRNMP-ITVKVDVYSYGVLLLEIICLR 700
            Y APE   N    T  +D++S G +L E++  R
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 13/201 (6%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRL 564
           E++G G +GTV+K   N  +   VA+K++     D      A  E+  + +  HKN+VRL
Sbjct: 8   EKIGEGTYGTVFKA-KNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL 66
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
                  +   LV+EF        F   +   + ++       +  GL + H      ++
Sbjct: 67  HDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVL 123
Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKV 684
           H D+KPQN+L++ +   ++++FGLA+   +        +R     V   W+R   +    
Sbjct: 124 HRDLKPQNLLINRNGELKLANFGLARAFGI-------PVRCYSAEVVTLWYRPPDVLFGA 176
Query: 685 DVYSYGVLLLEIICLRRNIDN 705
            +YS  + +    C+   + N
Sbjct: 177 KLYSTSIDMWSAGCIFAELAN 197

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 39/208 (18%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD---SEKEFKAEVNGIGQTHHKNLVRLL 565
           +G GA+G+V   + +      VAVKKL+  FQ    + + ++ E+  +    H+N++ LL
Sbjct: 36  VGSGAYGSVCSAY-DARLRQKVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGLL 93
Query: 566 GY------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLH 616
                    ++     LV   M    N  V S    D    +     +   +  GL Y+H
Sbjct: 94  DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF-----LVYQLLRGLKYIH 148
Query: 617 EECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR 676
                 IIH D+KP N+ +++    RI DFGLA+    D+  T        GYVA  W+R
Sbjct: 149 ---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR--QADEEMT--------GYVATRWYR 195
Query: 677 NMPITVK-------VDVYSYGVLLLEII 697
              I +        VD++S G ++ E++
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELL 223

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 90/199 (45%), Gaps = 21/199 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLLG 566
           +G GA G V   +  +   N VA+KKL+  FQ+     +A  E+  +   +HKN++ LL 
Sbjct: 34  IGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLN 92
Query: 567 Y------CDEGQNRLLVYEFMSNG--TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
                   +E Q+  +V E M      V        + ++ L   +      G+ +LH  
Sbjct: 93  VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLC-----GIKHLH-- 145
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               IIH D+KP NI++      +I DFGLA+  T   S        T+ Y APE    M
Sbjct: 146 -SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMVPFVVTRYYRAPEVILGM 202
Query: 679 PITVKVDVYSYGVLLLEII 697
                VD++S G ++ E+I
Sbjct: 203 GYKENVDIWSVGCIMGEMI 221

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 41/214 (19%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-FQDSEKEFKAEVNGIGQTHHKNLVRL--- 564
           +G GA+G V   + N+     VA+KK++    Q   +    E+  + +  H+N++ +   
Sbjct: 31  IGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 565 ---------------LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIA 609
                              +    +LL  + +SN  +  FL+                I 
Sbjct: 90  IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------IL 134
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN--TAIRGTK 667
            GL Y+H      ++H D+KP N+LL+   + +I DFGLA++   D  HT   T    T+
Sbjct: 135 RGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 668 GYVAPEWFRNMP-ITVKVDVYSYGVLLLEIICLR 700
            Y APE   N    T  +D++S G +L E++  R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 41/214 (19%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-FQDSEKEFKAEVNGIGQTHHKNLVRL--- 564
           +G GA+G V   + N+     VA+KK++    Q   +    E+  + +  H+N++ +   
Sbjct: 35  IGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 565 ---------------LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIA 609
                              +    +LL  + +SN  +  FL+                I 
Sbjct: 94  IRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQ---------------IL 138
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN--TAIRGTK 667
            GL Y+H      ++H D+KP N+LL+   + +I DFGLA++   D  HT   T    T+
Sbjct: 139 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 668 GYVAPEWFRNMP-ITVKVDVYSYGVLLLEIICLR 700
            Y APE   N    T  +D++S G +L E++  R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 117/275 (42%), Gaps = 33/275 (12%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE-KEFKAEVN-GIGQTHHKNLVRLL 565
           ELGRGA+G V K   ++ S   +AVK++ +     E K    +++  +        V   
Sbjct: 58  ELGRGAYGVVEK-MRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFY 116
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLF-----GDSKPNWKLRTEIAMGIAGGLFYLHEECC 620
           G      +  +  E M + ++  F       G + P   +  +IA+ I   L +LH +  
Sbjct: 117 GALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPE-DILGKIAVSIVKALEHLHSKLS 174
Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEW----FR 676
             +IH D+KP N+L++     ++ DFG++  L    S   T   G K Y+APE       
Sbjct: 175 --VIHRDVKPSNVLINALGQVKMCDFGISGYLV--DSVAKTIDAGCKPYMAPERINPELN 230
Query: 677 NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL 736
               +VK D++S G+ ++E+  LR   D+            W     Q   L+ +VE   
Sbjct: 231 QKGYSVKSDIWSLGITMIELAILRFPYDS------------WGTPFQQ---LKQVVEEPS 275
Query: 737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ 771
             +        FV     C++++   RPT  ++ Q
Sbjct: 276 PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 9/198 (4%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLN--SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           ELG G  G V+K  V+   S  V  +KL    +      +   E+  + + +   +V   
Sbjct: 32  ELGAGNGGVVFK--VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY 89
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           G         +  E M  G++   L    +   ++  ++++ +  GL YL E+   +I+H
Sbjct: 90  GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMH 147
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D+KP NIL++     ++ DFG++  L    S  N+ + GT+ Y++PE  +    +V+ D
Sbjct: 148 RDVKPSNILVNSRGEIKLCDFGVSGQLI--DSMANSFV-GTRSYMSPERLQGTHYSVQSD 204
Query: 686 VYSYGVLLLEIICLRRNI 703
           ++S G+ L+E+   R  I
Sbjct: 205 IWSMGLSLVEMAVGRYPI 222

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 87/191 (45%), Gaps = 13/191 (6%)
Query: 509 LGRGAFGTVY--KGFVNMGSSNHVAVKKLNSVFQDSEKE-FKAEVNGIGQTHHKNLVRLL 565
           LG+G+FG V   K  +  G    V V     V Q ++KE    EV  + Q  H N+ +L 
Sbjct: 34  LGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
            + ++     LV E  + G +   +    + +      I   +  G+ Y H+    +I+H
Sbjct: 93  EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHK---NKIVH 149
Query: 626 CDIKPQNILLDDH---YNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            D+KP+N+LL+      N RI DFGL+      +   +    GT  Y+APE         
Sbjct: 150 RDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKI--GTAYYIAPEVLHGT-YDE 206
Query: 683 KVDVYSYGVLL 693
           K DV+S GV+L
Sbjct: 207 KCDVWSTGVIL 217

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 47/217 (21%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-FQDSEKEFKAEVNGIGQTHHKNLV----- 562
           +G GA+G V   + N+     VA+KK++    Q   +    E+  + +  H+N++     
Sbjct: 51  IGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 109
Query: 563 ----------------RLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM 606
                            L+G       +LL  + +SN  +  FL+               
Sbjct: 110 IRAPTIEQMKDVYLVTHLMG---ADLYKLLKTQHLSNDHICYFLYQ-------------- 152
Query: 607 GIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN--TAIR 664
            I  GL Y+H      ++H D+KP N+LL+   + +I DFGLA++   D  HT   T   
Sbjct: 153 -ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 665 GTKGYVAPEWFRNMP-ITVKVDVYSYGVLLLEIICLR 700
            T+ Y APE   N    T  +D++S G +L E++  R
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 8/198 (4%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVK---KLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F + LG G+F TV      + +S   A+K   K + + ++       E + + +  H   
Sbjct: 34  FGKILGEGSFSTVVLA-RELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           V+L     + +       +  NG +  ++      +          I   L YLH +   
Sbjct: 93  VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG-- 150
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT-AIRGTKGYVAPEWFRNMPI 680
            IIH D+KP+NILL++  + +I+DFG AK+L+ +       A  GT  YV+PE       
Sbjct: 151 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSA 209
Query: 681 TVKVDVYSYGVLLLEIIC 698
               D+++ G ++ +++ 
Sbjct: 210 CKSSDLWALGCIIYQLVA 227

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 59.3 bits (142), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 10/199 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVK---KLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F + LG G+F TV      + +S   A+K   K + + ++       E + + +  H   
Sbjct: 37  FGKILGEGSFSTVVLA-RELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 95
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           V+L     + +       +  NG +  ++      +          I   L YLH +   
Sbjct: 96  VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG-- 153
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD--QSHTNTAIRGTKGYVAPEWFRNMP 679
            IIH D+KP+NILL++  + +I+DFG AK+L+ +  Q+  N+ + GT  YV+PE      
Sbjct: 154 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSPELLTEKS 211
Query: 680 ITVKVDVYSYGVLLLEIIC 698
                D+++ G ++ +++ 
Sbjct: 212 ACKSSDLWALGCIIYQLVA 230

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 59.3 bits (142), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 41/214 (19%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-FQDSEKEFKAEVNGIGQTHHKNLVRL--- 564
           +G GA+G V   + N+     VA+KK++    Q   +    E+  + +  H+N++ +   
Sbjct: 31  IGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 565 ---------------LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIA 609
                              +    +LL  + +SN  +  FL+                I 
Sbjct: 90  IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------IL 134
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN--TAIRGTK 667
            GL Y+H      ++H D+KP N+LL+   + +I DFGLA++   D  HT   T    T+
Sbjct: 135 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 668 GYVAPEWFRNMP-ITVKVDVYSYGVLLLEIICLR 700
            Y APE   N    T  +D++S G +L E++  R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 59.3 bits (142), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 92/210 (43%), Gaps = 37/210 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   F +  +   VAVKKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 30  VGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD 88
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   +E  +  LV   M    N  V      D    +     +   I  GL Y+H 
Sbjct: 89  VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF-----LIYQILRGLKYIH- 142
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    +I D GLA+       HT+  +    GYVA  W+R 
Sbjct: 143 --SADIIHRDLKPSNLAVNEDCELKILDGGLAR-------HTDDEM---TGYVATRWYRA 190
Query: 678 MPITVK-------VDVYSYGVLLLEIICLR 700
             I +        VD++S G ++ E++  R
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 41/214 (19%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-FQDSEKEFKAEVNGIGQTHHKNLVRL--- 564
           +G GA+G V   + N+     VA+KK++    Q   +    E+  + +  H+N++ +   
Sbjct: 33  IGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 91
Query: 565 ---------------LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIA 609
                              +    +LL  + +SN  +  FL+                I 
Sbjct: 92  IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------IL 136
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN--TAIRGTK 667
            GL Y+H      ++H D+KP N+LL+   + +I DFGLA++   D  HT   T    T+
Sbjct: 137 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 668 GYVAPEWFRNMP-ITVKVDVYSYGVLLLEIICLR 700
            Y APE   N    T  +D++S G +L E++  R
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 92/195 (47%), Gaps = 11/195 (5%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS--EKEFKAEVNGIGQTHHKNLVRL 564
           E++G G +G VYK   N G +   A+KK+    +D         E++ + +  H N+V+L
Sbjct: 8   EKIGEGTYGVVYKAQNNYGET--FALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
                  +  +LV+E +           +            + +  G+ Y H+    +++
Sbjct: 66  YDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVL 122
Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLD-QSHTNTAIRGTKGYVAPEWFR-NMPITV 682
           H D+KPQN+L++     +I+DFGLA+   +  + +T+  +  T  Y AP+    +   + 
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV--TLWYRAPDVLMGSKKYST 180
Query: 683 KVDVYSYGVLLLEII 697
            +D++S G +  E++
Sbjct: 181 TIDIWSVGCIFAEMV 195

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 10/199 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVK---KLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F + LG G+F TV      + +S   A+K   K + + ++       E + + +  H   
Sbjct: 14  FGKILGEGSFSTVVLA-RELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 72
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           V+L     + +       +  NG +  ++      +          I   L YLH +   
Sbjct: 73  VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG-- 130
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD--QSHTNTAIRGTKGYVAPEWFRNMP 679
            IIH D+KP+NILL++  + +I+DFG AK+L+ +  Q+  N  + GT  YV+PE      
Sbjct: 131 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKS 188
Query: 680 ITVKVDVYSYGVLLLEIIC 698
                D+++ G ++ +++ 
Sbjct: 189 ACKSSDLWALGCIIYQLVA 207

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 92/195 (47%), Gaps = 11/195 (5%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS--EKEFKAEVNGIGQTHHKNLVRL 564
           E++G G +G VYK   N G +   A+KK+    +D         E++ + +  H N+V+L
Sbjct: 8   EKIGEGTYGVVYKAQNNYGET--FALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
                  +  +LV+E +           +            + +  G+ Y H+    +++
Sbjct: 66  YDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVL 122
Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLD-QSHTNTAIRGTKGYVAPEWFR-NMPITV 682
           H D+KPQN+L++     +I+DFGLA+   +  + +T+  +  T  Y AP+    +   + 
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV--TLWYRAPDVLMGSKKYST 180
Query: 683 KVDVYSYGVLLLEII 697
            +D++S G +  E++
Sbjct: 181 TIDIWSVGCIFAEMV 195

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 41/214 (19%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-FQDSEKEFKAEVNGIGQTHHKNLVRL--- 564
           +G GA+G V   + N+     VA+KK++    Q   +    E+  + +  H+N++ +   
Sbjct: 39  IGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 97
Query: 565 ---------------LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIA 609
                              +    +LL  + +SN  +  FL+                I 
Sbjct: 98  IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------IL 142
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN--TAIRGTK 667
            GL Y+H      ++H D+KP N+LL+   + +I DFGLA++   D  HT   T    T+
Sbjct: 143 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 199
Query: 668 GYVAPEWFRNMP-ITVKVDVYSYGVLLLEIICLR 700
            Y APE   N    T  +D++S G +L E++  R
Sbjct: 200 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 41/214 (19%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-FQDSEKEFKAEVNGIGQTHHKNLVRL--- 564
           +G GA+G V   + N+     VA+KK++    Q   +    E+  + +  H+N++ +   
Sbjct: 31  IGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 565 ---------------LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIA 609
                              +    +LL  + +SN  +  FL+                I 
Sbjct: 90  IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------IL 134
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN--TAIRGTK 667
            GL Y+H      ++H D+KP N+LL+   + +I DFGLA++   D  HT   T    T+
Sbjct: 135 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 668 GYVAPEWFRNMP-ITVKVDVYSYGVLLLEIICLR 700
            Y APE   N    T  +D++S G +L E++  R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 41/214 (19%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLN-----SVFQDSEKEFK-------AEVNGIGQT 556
           +G GA+G V   + N+     VA+KK++     +  Q + +E K         + GI   
Sbjct: 33  IGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDI 91
Query: 557 -------HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIA 609
                    K++  +    +    +LL  + +SN  +  FL+                I 
Sbjct: 92  IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------IL 136
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN--TAIRGTK 667
            GL Y+H      ++H D+KP N+LL+   + +I DFGLA++   D  HT   T    T+
Sbjct: 137 RGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 668 GYVAPEWFRNMP-ITVKVDVYSYGVLLLEIICLR 700
            Y APE   N    T  +D++S G +L E++  R
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 10/199 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVK---KLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F + LG G+F TV      + +S   A+K   K + + ++       E + + +  H   
Sbjct: 13  FGKILGEGSFSTVVLA-RELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 71
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           V+L     + +       +  NG +  ++      +          I   L YLH +   
Sbjct: 72  VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG-- 129
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD--QSHTNTAIRGTKGYVAPEWFRNMP 679
            IIH D+KP+NILL++  + +I+DFG AK+L+ +  Q+  N  + GT  YV+PE      
Sbjct: 130 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKS 187
Query: 680 ITVKVDVYSYGVLLLEIIC 698
                D+++ G ++ +++ 
Sbjct: 188 ACKSSDLWALGCIIYQLVA 206

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 41/214 (19%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLN-----SVFQDSEKEFK-------AEVNGIGQT 556
           +G GA+G V   + N+     VA+KK++     +  Q + +E K         + GI   
Sbjct: 33  IGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDI 91
Query: 557 -------HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIA 609
                    K++  +    +    +LL  + +SN  +  FL+                I 
Sbjct: 92  IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------IL 136
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN--TAIRGTK 667
            GL Y+H      ++H D+KP N+LL+   + +I DFGLA++   D  HT   T    T+
Sbjct: 137 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 668 GYVAPEWFRNMP-ITVKVDVYSYGVLLLEIICLR 700
            Y APE   N    T  +D++S G +L E++  R
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 10/199 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVK---KLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F + LG G+F TV      + +S   A+K   K + + ++       E + + +  H   
Sbjct: 12  FGKILGEGSFSTVVLA-RELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 70
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           V+L     + +       +  NG +  ++      +          I   L YLH +   
Sbjct: 71  VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG-- 128
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD--QSHTNTAIRGTKGYVAPEWFRNMP 679
            IIH D+KP+NILL++  + +I+DFG AK+L+ +  Q+  N  + GT  YV+PE      
Sbjct: 129 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKS 186
Query: 680 ITVKVDVYSYGVLLLEIIC 698
                D+++ G ++ +++ 
Sbjct: 187 ACKSSDLWALGCIIYQLVA 205

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 10/199 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVK---KLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F + LG G+F TV      + +S   A+K   K + + ++       E + + +  H   
Sbjct: 11  FGKILGEGSFSTVVLA-RELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 69
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           V+L     + +       +  NG +  ++      +          I   L YLH +   
Sbjct: 70  VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG-- 127
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD--QSHTNTAIRGTKGYVAPEWFRNMP 679
            IIH D+KP+NILL++  + +I+DFG AK+L+ +  Q+  N  + GT  YV+PE      
Sbjct: 128 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKS 185
Query: 680 ITVKVDVYSYGVLLLEIIC 698
                D+++ G ++ +++ 
Sbjct: 186 ACKSSDLWALGCIIYQLVA 204

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVK---KLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F + LG G+F TV      + +S   A+K   K + + ++       E + + +  H   
Sbjct: 41  FGKILGEGSFSTVVLA-RELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 99
Query: 562 VRLLGYCDEGQNRLLV-YEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECC 620
           V+L  +C +   +L     +  NG +  ++      +          I   L YLH +  
Sbjct: 100 VKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG- 157
Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD--QSHTNTAIRGTKGYVAPEWFRNM 678
             IIH D+KP+NILL++  + +I+DFG AK+L+ +  Q+  N  + GT  YV+PE     
Sbjct: 158 --IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEK 214
Query: 679 PITVKVDVYSYGVLLLEIIC 698
                 D+++ G ++ +++ 
Sbjct: 215 SACKSSDLWALGCIIYQLVA 234

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 41/214 (19%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-FQDSEKEFKAEVNGIGQTHHKNLVRL--- 564
           +G GA+G V   + N+     VA+KK++    Q   +    E+  + +  H+N++ +   
Sbjct: 51  IGEGAYGMVCSAYDNVNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 109
Query: 565 ---------------LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIA 609
                              +    +LL  + +SN  +  FL+                I 
Sbjct: 110 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------IL 154
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN--TAIRGTK 667
            GL Y+H      ++H D+KP N+LL+   + +I DFGLA++   D  HT   T    T+
Sbjct: 155 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 668 GYVAPEWFRNMP-ITVKVDVYSYGVLLLEIICLR 700
            Y APE   N    T  +D++S G +L E++  R
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 41/214 (19%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-FQDSEKEFKAEVNGIGQTHHKNLVRL--- 564
           +G GA+G V   + N+     VA++K++    Q   +    E+  + +  H+N++ +   
Sbjct: 35  IGEGAYGMVCSAYDNLNKVR-VAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 565 ---------------LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIA 609
                              +    +LL  + +SN  +  FL+                I 
Sbjct: 94  IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------IL 138
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN--TAIRGTK 667
            GL Y+H      ++H D+KP N+LL+   + +I DFGLA++   D  HT   T    T+
Sbjct: 139 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 668 GYVAPEWFRNMP-ITVKVDVYSYGVLLLEIICLR 700
            Y APE   N    T  +D++S G +L E++  R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 92/195 (47%), Gaps = 11/195 (5%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS--EKEFKAEVNGIGQTHHKNLVRL 564
           E++G G +G VYK   N G +   A+KK+    +D         E++ + +  H N+V+L
Sbjct: 8   EKIGEGTYGVVYKAQNNYGET--FALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
                  +  +LV+E +           +            + +  G+ Y H+    +++
Sbjct: 66  YDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVL 122
Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLD-QSHTNTAIRGTKGYVAPEWFR-NMPITV 682
           H D+KPQN+L++     +I+DFGLA+   +  + +T+  +  T  Y AP+    +   + 
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV--TLWYRAPDVLMGSKKYST 180
Query: 683 KVDVYSYGVLLLEII 697
            +D++S G +  E++
Sbjct: 181 TIDIWSVGCIFAEMV 195

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 107/227 (47%), Gaps = 30/227 (13%)
Query: 482 DQGVSYMNLRCFTYKELVEVTRGFKEELGRGAFGTVYK----GFVNMGSSNHVAVKKLNS 537
           ++G   +   CF   EL+ V       LG+G +G V++       N G    + V K   
Sbjct: 8   NRGPEKIRPECF---ELLRV-------LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAM 57
Query: 538 VFQDSE--KEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFL----- 590
           + ++++     KAE N + +  H  +V L+     G    L+ E++S G +   L     
Sbjct: 58  IVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGI 117
Query: 591 FGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK 650
           F +    + L  EI+M +     +LH++    II+ D+KP+NI+L+   + +++DFGL K
Sbjct: 118 FMEDTACFYL-AEISMALG----HLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK 169
Query: 651 LLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEII 697
               D + T+    GT  Y+APE          VD +S G L+ +++
Sbjct: 170 ESIHDGTVTHXFC-GTIEYMAPEILMRSGHNRAVDWWSLGALMYDML 215

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 81/323 (25%), Positives = 141/323 (43%), Gaps = 56/323 (17%)
Query: 416 DRDETGTTFIKIRKVPSGGKKKVDVLIPVVSVLFGSSALIN--LLLVSACCLGFLVVNRK 473
           D+D  G   +KI    +G  + + V  P +++    + LI+    LV+     F++  +K
Sbjct: 279 DKDRKGMLQLKI----AGAPEPLTVTAPSLTIAENMADLIDGYCRLVNGATQSFIIRPQK 334
Query: 474 KFMRP--------HQEDQGVSYMNLRCFTYKELVEV-----------TRGF-----KEEL 509
           +  R         + E QGV    +      +  E+           TR +     + EL
Sbjct: 335 EGERALPSIPKLANNEKQGVRSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIEL 394
Query: 510 GR----GAFGTVYKGFVNMGSSN---HVAVKKLNSVFQDSEKE-FKAEVNGIGQTHHKNL 561
           GR    G FG V++G + M   N    VA+K   +   DS +E F  E   + Q  H ++
Sbjct: 395 GRCIGEGQFGDVHQG-IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 453
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEEC 619
           V+L+G   E     ++ E  + G + SFL    K +  L + I  A  ++  L YL  + 
Sbjct: 454 VKLIGVITENPV-WIIMELCTLGELRSFL-QVRKFSLDLASLILYAYQLSTALAYLESK- 510
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG-----YVAPEW 674
             + +H DI  +N+L+      ++ DFGL++ +       +T  + +KG     ++APE 
Sbjct: 511 --RFVHRDIAARNVLVSATDCVKLGDFGLSRYM-----EDSTYYKASKGKLPIKWMAPES 563
Query: 675 FRNMPITVKVDVYSYGVLLLEII 697
                 T   DV+ +GV + EI+
Sbjct: 564 INFRRFTSASDVWMFGVCMWEIL 586

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 10/199 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVK---KLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F + LG G+F TV      + +S   A+K   K + + ++       E + + +  H   
Sbjct: 36  FGKILGEGSFSTVVLA-RELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           V+L     + +       +  NG +  ++      +          I   L YLH +   
Sbjct: 95  VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG-- 152
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD--QSHTNTAIRGTKGYVAPEWFRNMP 679
            IIH D+KP+NILL++  + +I+DFG AK+L+ +  Q+  N  + GT  YV+PE      
Sbjct: 153 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKS 210
Query: 680 ITVKVDVYSYGVLLLEIIC 698
                D+++ G ++ +++ 
Sbjct: 211 ACKSSDLWALGCIIYQLVA 229

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 10/199 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVK---KLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F + LG G+F TV      + +S   A+K   K + + ++       E + + +  H   
Sbjct: 33  FGKILGEGSFSTVVLA-RELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 91
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           V+L     + +       +  NG +  ++      +          I   L YLH +   
Sbjct: 92  VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG-- 149
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD--QSHTNTAIRGTKGYVAPEWFRNMP 679
            IIH D+KP+NILL++  + +I+DFG AK+L+ +  Q+  N+ + GT  YV+PE      
Sbjct: 150 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQYVSPELLTEKS 207
Query: 680 ITVKVDVYSYGVLLLEIIC 698
                D+++ G ++ +++ 
Sbjct: 208 ACKSSDLWALGCIIYQLVA 226

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 10/199 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVK---KLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F + LG G+F TV      + +S   A+K   K + + ++       E + + +  H   
Sbjct: 34  FGKILGEGSFSTVVLA-RELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           V+L     + +       +  NG +  ++      +          I   L YLH +   
Sbjct: 93  VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG-- 150
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD--QSHTNTAIRGTKGYVAPEWFRNMP 679
            IIH D+KP+NILL++  + +I+DFG AK+L+ +  Q+  N  + GT  YV+PE      
Sbjct: 151 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKS 208
Query: 680 ITVKVDVYSYGVLLLEIIC 698
                D+++ G ++ +++ 
Sbjct: 209 ACKSSDLWALGCIIYQLVA 227

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 10/199 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVK---KLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F + LG G+F TV      + +S   A+K   K + + ++       E + + +  H   
Sbjct: 37  FGKILGEGSFSTVVLA-RELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 95
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           V+L     + +       +  NG +  ++      +          I   L YLH +   
Sbjct: 96  VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG-- 153
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD--QSHTNTAIRGTKGYVAPEWFRNMP 679
            IIH D+KP+NILL++  + +I+DFG AK+L+ +  Q+  N  + GT  YV+PE      
Sbjct: 154 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKS 211
Query: 680 ITVKVDVYSYGVLLLEIIC 698
                D+++ G ++ +++ 
Sbjct: 212 ACKSSDLWALGCIIYQLVA 230

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 10/199 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVK---KLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F + LG G+F TV      + +S   A+K   K + + ++       E + + +  H   
Sbjct: 34  FGKILGEGSFSTVVLA-RELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           V+L     + +       +  NG +  ++      +          I   L YLH +   
Sbjct: 93  VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG-- 150
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD--QSHTNTAIRGTKGYVAPEWFRNMP 679
            IIH D+KP+NILL++  + +I+DFG AK+L+ +  Q+  N  + GT  YV+PE      
Sbjct: 151 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKS 208
Query: 680 ITVKVDVYSYGVLLLEIIC 698
                D+++ G ++ +++ 
Sbjct: 209 ACKSSDLWALGCIIYQLVA 227

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 10/199 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVK---KLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F + LG G+F TV      + +S   A+K   K + + ++       E + + +  H   
Sbjct: 36  FGKILGEGSFSTVVLA-RELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           V+L     + +       +  NG +  ++      +          I   L YLH +   
Sbjct: 95  VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG-- 152
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD--QSHTNTAIRGTKGYVAPEWFRNMP 679
            IIH D+KP+NILL++  + +I+DFG AK+L+ +  Q+  N  + GT  YV+PE      
Sbjct: 153 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKS 210
Query: 680 ITVKVDVYSYGVLLLEIIC 698
                D+++ G ++ +++ 
Sbjct: 211 ACKSSDLWALGCIIYQLVA 229

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 10/199 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVK---KLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F + LG G+F TV      + +S   A+K   K + + ++       E + + +  H   
Sbjct: 36  FGKILGEGSFSTVVLA-RELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           V+L     + +       +  NG +  ++      +          I   L YLH +   
Sbjct: 95  VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG-- 152
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD--QSHTNTAIRGTKGYVAPEWFRNMP 679
            IIH D+KP+NILL++  + +I+DFG AK+L+ +  Q+  N  + GT  YV+PE      
Sbjct: 153 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKS 210
Query: 680 ITVKVDVYSYGVLLLEIIC 698
                D+++ G ++ +++ 
Sbjct: 211 ACKSSDLWALGCIIYQLVA 229

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSN---HVAVKKLNSVFQDSEKE-FKAEVN 551
           +E +E+ R     +G G FG V++G + M   N    VA+K   +   DS +E F  E  
Sbjct: 9   RERIELGRC----IGEGQFGDVHQG-IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 552 GIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIA 609
            + Q  H ++V+L+G   E     ++ E  + G + SFL    K +  L + I  A  ++
Sbjct: 64  TMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL-QVRKFSLDLASLILYAYQLS 121
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG- 668
             L YL  +   + +H DI  +N+L+      ++ DFGL++ +       +T  + +KG 
Sbjct: 122 TALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYM-----EDSTYYKASKGK 173
Query: 669 ----YVAPEWFRNMPITVKVDVYSYGVLLLEII 697
               ++APE       T   DV+ +GV + EI+
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 206

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 93/195 (47%), Gaps = 9/195 (4%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLN--SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           ELG G  G V+K  V+   S  V  +KL    +      +   E+  + + +   +V   
Sbjct: 16  ELGAGNGGVVFK--VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY 73
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           G         +  E M  G++   L    +   ++  ++++ +  GL YL E+   +I+H
Sbjct: 74  GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMH 131
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D+KP NIL++     ++ DFG++  L  + ++      GT+ Y++PE  +    +V+ D
Sbjct: 132 RDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFV---GTRSYMSPERLQGTHYSVQSD 188
Query: 686 VYSYGVLLLEIICLR 700
           ++S G+ L+E+   R
Sbjct: 189 IWSMGLSLVEMAVGR 203

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 10/199 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVK---KLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F + LG G+F TV      + +S   A+K   K + + ++       E + + +  H   
Sbjct: 39  FGKILGEGSFSTVVLA-RELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 97
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           V+L     + +       +  NG +  ++      +          I   L YLH +   
Sbjct: 98  VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG-- 155
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD--QSHTNTAIRGTKGYVAPEWFRNMP 679
            IIH D+KP+NILL++  + +I+DFG AK+L+ +  Q+  N  + GT  YV+PE      
Sbjct: 156 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKS 213
Query: 680 ITVKVDVYSYGVLLLEIIC 698
                D+++ G ++ +++ 
Sbjct: 214 ACKSSDLWALGCIIYQLVA 232

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 10/199 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVK---KLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F + LG G+F TV      + +S   A+K   K + + ++       E + + +  H   
Sbjct: 36  FGKILGEGSFSTVVLA-RELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           V+L     + +       +  NG +  ++      +          I   L YLH +   
Sbjct: 95  VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG-- 152
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD--QSHTNTAIRGTKGYVAPEWFRNMP 679
            IIH D+KP+NILL++  + +I+DFG AK+L+ +  Q+  N  + GT  YV+PE      
Sbjct: 153 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKS 210
Query: 680 ITVKVDVYSYGVLLLEIIC 698
                D+++ G ++ +++ 
Sbjct: 211 AXKSSDLWALGCIIYQLVA 229

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 101/210 (48%), Gaps = 23/210 (10%)
Query: 500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-AEVNGIGQTHH 558
           EV+    + +G G+FG VY+  +   S   VA+KK   V QD  K FK  E+  + +  H
Sbjct: 19  EVSYTDTKVIGNGSFGVVYQAKL-CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDH 72
Query: 559 KNLVRL-LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIA 609
            N+VRL   +   G+ + +VY  +    V   ++  ++   + +  + +         + 
Sbjct: 73  CNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTAIRGTKG 668
             L Y+H      I H DIKPQN+LLD D    ++ DFG AK L   +   N +   ++ 
Sbjct: 133 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY 187
Query: 669 YVAPEW-FRNMPITVKVDVYSYGVLLLEII 697
           Y APE  F     T  +DV+S G +L E++
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELL 217

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 10/199 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVK---KLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F + LG G+F TV      + +S   A+K   K + + ++       E + + +  H   
Sbjct: 18  FGKILGEGSFSTVVLA-RELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 76
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           V+L     + +       +  NG +  ++      +          I   L YLH +   
Sbjct: 77  VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG-- 134
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD--QSHTNTAIRGTKGYVAPEWFRNMP 679
            IIH D+KP+NILL++  + +I+DFG AK+L+ +  Q+  N  + GT  YV+PE      
Sbjct: 135 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKS 192
Query: 680 ITVKVDVYSYGVLLLEIIC 698
                D+++ G ++ +++ 
Sbjct: 193 ACKSSDLWALGCIIYQLVA 211

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 89/200 (44%), Gaps = 15/200 (7%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNS---VFQDSEKEFKAEVNGI-GQTHHKN 560
           F + +G+G+FG V     +       AVK L     + +  EK   +E N +     H  
Sbjct: 42  FLKVIGKGSFGKVLLA-RHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPF 100
Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDS---KPNWKLRTEIAMGIAGGLFYLHE 617
           LV L            V ++++ G +   L  +    +P  +     A  IA  L YLH 
Sbjct: 101 LVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF---YAAEIASALGYLH- 156
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                I++ D+KP+NILLD   +  ++DFGL K   ++ + T +   GT  Y+APE    
Sbjct: 157 --SLNIVYRDLKPENILLDSQGHIVLTDFGLCK-ENIEHNSTTSTFCGTPEYLAPEVLHK 213
Query: 678 MPITVKVDVYSYGVLLLEII 697
            P    VD +  G +L E++
Sbjct: 214 QPYDRTVDWWCLGAVLYEML 233

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 118/275 (42%), Gaps = 33/275 (12%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE-KEFKAEVN-GIGQTHHKNLVRLL 565
           ELGRGA+G V K   ++ S   +AVK++ +     E K    +++  +        V   
Sbjct: 14  ELGRGAYGVVEK-MRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFY 72
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLF-----GDSKPNWKLRTEIAMGIAGGLFYLHEECC 620
           G      +  +  E M + ++  F       G + P   +  +IA+ I   L +LH +  
Sbjct: 73  GALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPE-DILGKIAVSIVKALEHLHSKLS 130
Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEW----FR 676
             +IH D+KP N+L++     ++ DFG++  L  D +    A  G K Y+APE       
Sbjct: 131 --VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA--GCKPYMAPERINPELN 186
Query: 677 NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL 736
               +VK D++S G+ ++E+  LR   D+            W     Q   L+ +VE   
Sbjct: 187 QKGYSVKSDIWSLGITMIELAILRFPYDS------------WGTPFQQ---LKQVVEEPS 231
Query: 737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ 771
             +        FV     C++++   RPT  ++ Q
Sbjct: 232 PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 10/199 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVK---KLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F + LG G+F TV      + +S   A+K   K + + ++       E + + +  H   
Sbjct: 36  FGKILGEGSFSTVVLA-RELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           V+L     + +       +  NG +  ++      +          I   L YLH +   
Sbjct: 95  VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG-- 152
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD--QSHTNTAIRGTKGYVAPEWFRNMP 679
            IIH D+KP+NILL++  + +I+DFG AK+L+ +  Q+  N  + GT  YV+PE      
Sbjct: 153 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKS 210
Query: 680 ITVKVDVYSYGVLLLEIIC 698
                D+++ G ++ +++ 
Sbjct: 211 ACKSSDLWALGCIIYQLVA 229

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 6/190 (3%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           ++G G+ G V        S   VAVK ++   Q   +    EV  +    H N+V +   
Sbjct: 52  KIGEGSTGIVCLAR-EKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKS 110
Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCD 627
              G+   ++ EF+  G +   +    + N +    +   +   L YLH +    +IH D
Sbjct: 111 YLVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQG---VIHRD 166
Query: 628 IKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVY 687
           IK  +ILL      ++SDFG    ++ D       + GT  ++APE         +VD++
Sbjct: 167 IKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLV-GTPYWMAPEVISRSLYATEVDIW 225
Query: 688 SYGVLLLEII 697
           S G++++E++
Sbjct: 226 SLGIMVIEMV 235

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 10/199 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVK---KLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F + LG G+F TV      + +S   A+K   K + + ++       E + + +  H   
Sbjct: 33  FGKILGEGSFSTVVLA-RELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 91
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           V+L     + +       +  NG +  ++      +          I   L YLH +   
Sbjct: 92  VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG-- 149
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD--QSHTNTAIRGTKGYVAPEWFRNMP 679
            IIH D+KP+NILL++  + +I+DFG AK+L+ +  Q+  N  + GT  YV+PE      
Sbjct: 150 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKS 207
Query: 680 ITVKVDVYSYGVLLLEIIC 698
                D+++ G ++ +++ 
Sbjct: 208 ACKSSDLWALGCIIYQLVA 226

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 41/214 (19%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-FQDSEKEFKAEVNGIGQTHHKNLVRL--- 564
           +G GA+G V   + N+     VA+KK++    Q   +    E+  + +  H+N++ +   
Sbjct: 35  IGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 565 ---------------LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIA 609
                              +    +LL  + +SN  +  FL+                I 
Sbjct: 94  IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------IL 138
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR--GTK 667
            GL Y+H      ++H D+KP N+LL+   + +I DFGLA++   D  HT        T+
Sbjct: 139 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 195
Query: 668 GYVAPEWFRNMP-ITVKVDVYSYGVLLLEIICLR 700
            Y APE   N    T  +D++S G +L E++  R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 41/214 (19%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-FQDSEKEFKAEVNGIGQTHHKNLVRL--- 564
           +G GA+G V   + N+     VA+KK++    Q   +    E+  + +  H+N++ +   
Sbjct: 36  IGEGAYGMVCSAYDNLNKVR-VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 94
Query: 565 ---------------LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIA 609
                              +    +LL  + +SN  +  FL+                I 
Sbjct: 95  IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQ---------------IL 139
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR--GTK 667
            GL Y+H      ++H D+KP N+LL+   + +I DFGLA++   D  HT        T+
Sbjct: 140 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 196
Query: 668 GYVAPEWFRNMP-ITVKVDVYSYGVLLLEIICLR 700
            Y APE   N    T  +D++S G +L E++  R
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230

>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 105/221 (47%), Gaps = 29/221 (13%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-AEVNGIGQTHHKNLVRLL 565
           E +G+G +G V++G  +  S   VAVK  +S  +D +  F+  E+       H N++  +
Sbjct: 14  ECVGKGRYGEVWRGLWHGES---VAVKIFSS--RDEQSWFRETEIYNTVLLRHDNILGFI 68
Query: 566 GYCDEGQNR----LLVYEFMSNGTVASFLFGDS-KPNWKLRTEIAMGIAGGLFYLHEECC 620
                 +N      L+  +  +G++  FL   + +P+  LR  +A+  A GL +LH E  
Sbjct: 69  ASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALR--LAVSAACGLAHLHVEIF 126
Query: 621 -TQ----IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT---NTAIRGTKGYVAP 672
            TQ    I H D K +N+L+  +    I+D GLA + +    +    N    GTK Y+AP
Sbjct: 127 GTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAP 186
Query: 673 EWFRNMPIT------VKVDVYSYGVLLLEIICLRRNIDNEI 707
           E       T         D++++G++L EI   RR I N I
Sbjct: 187 EVLDEQIRTDCFESYKWTDIWAFGLVLWEIA--RRTIVNGI 225

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 95/201 (47%), Gaps = 24/201 (11%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-AEVNGIGQTHHKNLVRLLGY 567
           +G G+FG V++    +  S+ VA+KK   V QD  K FK  E+  +    H N+V L  +
Sbjct: 48  IGNGSFGVVFQA--KLVESDEVAIKK---VLQD--KRFKNRELQIMRIVKHPNVVDLKAF 100
Query: 568 C-DEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIAGGLFYLHEE 618
               G  +  V+  +    V   ++  S+   KL+  + M         +   L Y+H  
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH-- 158
Query: 619 CCTQIIHCDIKPQNILLDDHYNA-RISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEW-FR 676
               I H DIKPQN+LLD      ++ DFG AK+L   +   N +   ++ Y APE  F 
Sbjct: 159 -SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP--NVSXICSRYYRAPELIFG 215
Query: 677 NMPITVKVDVYSYGVLLLEII 697
               T  +D++S G ++ E++
Sbjct: 216 ATNYTTNIDIWSTGCVMAELM 236

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 89/207 (42%), Gaps = 37/207 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   + +      VAVKKL+  FQ     +    E+  +    H+N++ LL 
Sbjct: 28  VGSGAYGSVCSAY-DARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLD 86
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   ++     LV   M    N  V      D    +     +   +  GL Y+H 
Sbjct: 87  VFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-----LVYQLLRGLKYIH- 140
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    RI DFGLA+    D+  T        GYVA  W+R 
Sbjct: 141 --SAGIIHRDLKPSNVAVNEDCELRILDFGLAR--QADEEMT--------GYVATRWYRA 188
Query: 678 MPITVK-------VDVYSYGVLLLEII 697
             I +        VD++S G ++ E++
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELL 215

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 19/202 (9%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH-HKNLVRLL 565
           E LG GA+  V +G V++ +    AVK +      S      EV  + Q   +KN++ L+
Sbjct: 19  ELLGEGAYAKV-QGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
            + ++     LV+E +  G++ + +      N +  + +   +A  L +LH +    I H
Sbjct: 78  EFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTK---GIAH 134
Query: 626 CDIKPQNILLDDHYN---ARISDFGLAKLLTLDQSHTN------TAIRGTKGYVAPEWFR 676
            D+KP+NIL +        +I DF L   + L+ S T       T   G+  Y+APE   
Sbjct: 135 RDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVE 194
Query: 677 NMPITV-----KVDVYSYGVLL 693
                      + D++S GV+L
Sbjct: 195 VFTDQATFYDKRCDLWSLGVVL 216

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 87/201 (43%), Gaps = 23/201 (11%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLVRLL 565
           +LG G +G VYK  ++  ++  VA+K++    ++      A  EV+ + +  H+N++ L 
Sbjct: 41  KLGEGTYGEVYKA-IDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELK 99
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYLHEECCTQI 623
                     L++E+  N       + D  P+  +R        +  G+ + H   C   
Sbjct: 100 SVIHHNHRLHLIFEYAENDLKK---YMDKNPDVSMRVIKSFLYQLINGVNFCHSRRC--- 153
Query: 624 IHCDIKPQNILL-----DDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
           +H D+KPQN+LL      +    +I DFGLA+   +        IR     +   W+R  
Sbjct: 154 LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI-------PIRQFTHEIITLWYRPP 206
Query: 679 PITVKVDVYSYGVLLLEIICL 699
            I +    YS  V +  I C+
Sbjct: 207 EILLGSRHYSTSVDIWSIACI 227

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 89/207 (42%), Gaps = 37/207 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V   + +      VAVKKL+  FQ     +    E+  +    H+N++ LL 
Sbjct: 36  VGSGAYGSVCSAY-DARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLD 94
Query: 567 Y------CDEGQNRLLVYEFMS---NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
                   ++     LV   M    N  V      D    +     +   +  GL Y+H 
Sbjct: 95  VFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-----LVYQLLRGLKYIH- 148
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                IIH D+KP N+ +++    RI DFGLA+    D+  T        GYVA  W+R 
Sbjct: 149 --SAGIIHRDLKPSNVAVNEDSELRILDFGLAR--QADEEMT--------GYVATRWYRA 196
Query: 678 MPITVK-------VDVYSYGVLLLEII 697
             I +        VD++S G ++ E++
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELL 223

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 605 AMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR 664
           A  I  GL ++H      +++ D+KP NILLD+H + RISD GLA   +  + H +    
Sbjct: 297 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 350
Query: 665 GTKGYVAPEWF-RNMPITVKVDVYSYGVLLLEII----CLRRNIDNEISKVDKAILT 716
           GT GY+APE   + +      D +S G +L +++      R++   +  ++D+  LT
Sbjct: 351 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT 407

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 605 AMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR 664
           A  I  GL ++H      +++ D+KP NILLD+H + RISD GLA   +  + H +    
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 665 GTKGYVAPEWF-RNMPITVKVDVYSYGVLLLEII----CLRRNIDNEISKVDKAILT 716
           GT GY+APE   + +      D +S G +L +++      R++   +  ++D+  LT
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT 408

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKLNSVFQDSEKEF---KAEVNGIGQTHHKNLVRL 564
           +GRG++  V    V +  ++ + A+K +     + +++    + E +   Q  +   +  
Sbjct: 28  IGRGSYAKVL--LVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 85
Query: 565 LGYCDEGQNRLL-VYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           L  C + ++RL  V E+++ G +   +    K   +     +  I+  L YLHE     I
Sbjct: 86  LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG---I 142
Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVK 683
           I+ D+K  N+LLD   + +++D+G+ K   L    T +   GT  Y+APE  R       
Sbjct: 143 IYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFCGTPNYIAPEILRGEDYGFS 201
Query: 684 VDVYSYGVLLLEIICLRRNID 704
           VD ++ GVL+ E++  R   D
Sbjct: 202 VDWWALGVLMFEMMAGRSPFD 222

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-AEVNGIGQTHH 558
           EV+    + +G G+FG VY+  +   S   VA+KK   V QD  K FK  E+  + +  H
Sbjct: 53  EVSYTDTKVIGNGSFGVVYQAKL-CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDH 106
Query: 559 KNLVRL-LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIA 609
            N+VRL   +   G+ +  VY  +    V   ++  ++   + +  + +         + 
Sbjct: 107 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 166
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTAIRGTKG 668
             L Y+H      I H DIKPQN+LLD D    ++ DFG AK L   +   N +   ++ 
Sbjct: 167 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY 221
Query: 669 YVAPEW-FRNMPITVKVDVYSYGVLLLEII 697
           Y APE  F     T  +DV+S G +L E++
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELL 251

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 36/207 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS--EKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V    ++  S   VA+KKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 32  VGSGAYGSVCSA-IDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLD 90
Query: 567 YCDEGQNR------LLVYEFMSNG--TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
                 +        LV  FM      +    F + K  +     +   +  GL Y+H  
Sbjct: 91  VFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQY-----LVYQMLKGLKYIH-- 143
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               ++H D+KP N+ +++    +I DFGLA+       H +  +    GYV   W+R  
Sbjct: 144 -SAGVVHRDLKPGNLAVNEDCELKILDFGLAR-------HADAEM---TGYVVTRWYRAP 192
Query: 679 PITVK-------VDVYSYGVLLLEIIC 698
            + +        VD++S G ++ E++ 
Sbjct: 193 EVILSWMHYNQTVDIWSVGCIMAEMLT 219

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 605 AMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR 664
           A  I  GL ++H      +++ D+KP NILLD+H + RISD GLA   +  + H +    
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 665 GTKGYVAPEWF-RNMPITVKVDVYSYGVLLLEII----CLRRNIDNEISKVDKAILT 716
           GT GY+APE   + +      D +S G +L +++      R++   +  ++D+  LT
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT 408

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-AEVNGIGQTHH 558
           EV+    + +G G+FG VY+  +   S   VA+KK   V QD  K FK  E+  + +  H
Sbjct: 38  EVSYTDTKVIGNGSFGVVYQAKL-CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDH 91
Query: 559 KNLVRL-LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIA 609
            N+VRL   +   G+ +  VY  +    V   ++  ++   + +  + +         + 
Sbjct: 92  CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 151
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTAIRGTKG 668
             L Y+H      I H DIKPQN+LLD D    ++ DFG AK L   +   N +   ++ 
Sbjct: 152 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY 206
Query: 669 YVAPEW-FRNMPITVKVDVYSYGVLLLEII 697
           Y APE  F     T  +DV+S G +L E++
Sbjct: 207 YRAPELIFGATDYTSSIDVWSAGCVLAELL 236

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 605 AMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR 664
           A  I  GL ++H      +++ D+KP NILLD+H + RISD GLA   +  + H +    
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 665 GTKGYVAPEWF-RNMPITVKVDVYSYGVLLLEII----CLRRNIDNEISKVDKAILT 716
           GT GY+APE   + +      D +S G +L +++      R++   +  ++D+  LT
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT 408

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-AEVNGIGQTHH 558
           EV+    + +G G+FG VY+  +   S   VA+KK   V QD  K FK  E+  + +  H
Sbjct: 27  EVSYTDTKVIGNGSFGVVYQAKL-CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDH 80
Query: 559 KNLVRL-LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIA 609
            N+VRL   +   G+ +  VY  +    V   ++  ++   + +  + +         + 
Sbjct: 81  CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 140
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTAIRGTKG 668
             L Y+H      I H DIKPQN+LLD D    ++ DFG AK L   +   N +   ++ 
Sbjct: 141 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY 195
Query: 669 YVAPEW-FRNMPITVKVDVYSYGVLLLEII 697
           Y APE  F     T  +DV+S G +L E++
Sbjct: 196 YRAPELIFGATDYTSSIDVWSAGCVLAELL 225

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 90/199 (45%), Gaps = 10/199 (5%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVK---KLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F + LG G+F T       + +S   A+K   K + + ++       E + + +  H   
Sbjct: 34  FGKILGEGSFSTTVLA-RELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           V+L     + +       +  NG +  ++      +          I   L YLH +   
Sbjct: 93  VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG-- 150
Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD--QSHTNTAIRGTKGYVAPEWFRNMP 679
            IIH D+KP+NILL++  + +I+DFG AK+L+ +  Q+  N  + GT  YV+PE      
Sbjct: 151 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV-GTAQYVSPELLTEKS 208
Query: 680 ITVKVDVYSYGVLLLEIIC 698
                D+++ G ++ +++ 
Sbjct: 209 ACKSSDLWALGCIIYQLVA 227

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-AEVNGIGQTHH 558
           EV+    + +G G+FG VY+  +   S   VA+KK   V QD  K FK  E+  + +  H
Sbjct: 47  EVSYTDTKVIGNGSFGVVYQAKL-CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDH 100
Query: 559 KNLVRL-LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIA 609
            N+VRL   +   G+ +  VY  +    V   ++  ++   + +  + +         + 
Sbjct: 101 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 160
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTAIRGTKG 668
             L Y+H      I H DIKPQN+LLD D    ++ DFG AK L   +   N +   ++ 
Sbjct: 161 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY 215
Query: 669 YVAPEW-FRNMPITVKVDVYSYGVLLLEII 697
           Y APE  F     T  +DV+S G +L E++
Sbjct: 216 YRAPELIFGATDYTSSIDVWSAGCVLAELL 245

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-AEVNGIGQTHH 558
           EV+    + +G G+FG VY+  +   S   VA+KK   V QD  K FK  E+  + +  H
Sbjct: 53  EVSYTDTKVIGNGSFGVVYQAKL-CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDH 106
Query: 559 KNLVRL-LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIA 609
            N+VRL   +   G+ +  VY  +    V   ++  ++   + +  + +         + 
Sbjct: 107 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 166
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTAIRGTKG 668
             L Y+H      I H DIKPQN+LLD D    ++ DFG AK L   +   N +   ++ 
Sbjct: 167 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY 221
Query: 669 YVAPEW-FRNMPITVKVDVYSYGVLLLEII 697
           Y APE  F     T  +DV+S G +L E++
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELL 251

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKLNSVFQDSEKEF---KAEVNGIGQTHHKNLVRL 564
           +GRG++  V    V +  ++ + A+K +     + +++    + E +   Q  +   +  
Sbjct: 17  IGRGSYAKVL--LVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 74
Query: 565 LGYCDEGQNRLL-VYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           L  C + ++RL  V E+++ G +   +    K   +     +  I+  L YLHE     I
Sbjct: 75  LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG---I 131
Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVK 683
           I+ D+K  N+LLD   + +++D+G+ K   L    T +   GT  Y+APE  R       
Sbjct: 132 IYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFCGTPNYIAPEILRGEDYGFS 190
Query: 684 VDVYSYGVLLLEIICLRRNID 704
           VD ++ GVL+ E++  R   D
Sbjct: 191 VDWWALGVLMFEMMAGRSPFD 211

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKLNSVFQDSEKEF---KAEVNGIGQTHHKNLVRL 564
           +GRG++  V    V +  ++ + A+K +     + +++    + E +   Q  +   +  
Sbjct: 13  IGRGSYAKVL--LVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 70
Query: 565 LGYCDEGQNRLL-VYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           L  C + ++RL  V E+++ G +   +    K   +     +  I+  L YLHE     I
Sbjct: 71  LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG---I 127
Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVK 683
           I+ D+K  N+LLD   + +++D+G+ K   L    T +   GT  Y+APE  R       
Sbjct: 128 IYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFCGTPNYIAPEILRGEDYGFS 186
Query: 684 VDVYSYGVLLLEIICLRRNID 704
           VD ++ GVL+ E++  R   D
Sbjct: 187 VDWWALGVLMFEMMAGRSPFD 207

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-AEVNGIGQTHH 558
           EV+    + +G G+FG VY+  +   S   VA+KK   V QD  K FK  E+  + +  H
Sbjct: 31  EVSYTDTKVIGNGSFGVVYQAKL-CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDH 84
Query: 559 KNLVRL-LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIA 609
            N+VRL   +   G+ +  VY  +    V   ++  ++   + +  + +         + 
Sbjct: 85  CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 144
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTAIRGTKG 668
             L Y+H      I H DIKPQN+LLD D    ++ DFG AK L   +   N +   ++ 
Sbjct: 145 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY 199
Query: 669 YVAPEW-FRNMPITVKVDVYSYGVLLLEII 697
           Y APE  F     T  +DV+S G +L E++
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELL 229

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-AEVNGIGQTHH 558
           EV+    + +G G+FG VY+  +   S   VA+KK   V QD  K FK  E+  + +  H
Sbjct: 31  EVSYTDTKVIGNGSFGVVYQAKL-CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDH 84
Query: 559 KNLVRL-LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIA 609
            N+VRL   +   G+ +  VY  +    V   ++  ++   + +  + +         + 
Sbjct: 85  CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 144
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTAIRGTKG 668
             L Y+H      I H DIKPQN+LLD D    ++ DFG AK L   +   N +   ++ 
Sbjct: 145 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY 199
Query: 669 YVAPEW-FRNMPITVKVDVYSYGVLLLEII 697
           Y APE  F     T  +DV+S G +L E++
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELL 229

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 10/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYC 568
           +GRG++G V K  V  G+    A KK+   F +    FK E+  +    H N++RL    
Sbjct: 17  IGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF 75
Query: 569 DEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDI 628
           ++  +  LV E  + G +   +             I   +   + Y H+     + H D+
Sbjct: 76  EDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHK---LNVAHRDL 132
Query: 629 KPQNIL-LDDHYNA--RISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
           KP+N L L D  ++  ++ DFGLA      +        GT  YV+P+    +    + D
Sbjct: 133 KPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV--GTPYYVSPQVLEGL-YGPECD 189
Query: 686 VYSYGVLLLEIIC 698
            +S GV++  ++C
Sbjct: 190 EWSAGVMMYVLLC 202

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-AEVNGIGQTHH 558
           EV+    + +G G+FG VY+  +   S   VA+KK   V QD  K FK  E+  + +  H
Sbjct: 55  EVSYTDTKVIGNGSFGVVYQAKL-CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDH 108
Query: 559 KNLVRL-LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIA 609
            N+VRL   +   G+ +  VY  +    V   ++  ++   + +  + +         + 
Sbjct: 109 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 168
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTAIRGTKG 668
             L Y+H      I H DIKPQN+LLD D    ++ DFG AK L   +   N +   ++ 
Sbjct: 169 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY 223
Query: 669 YVAPEW-FRNMPITVKVDVYSYGVLLLEII 697
           Y APE  F     T  +DV+S G +L E++
Sbjct: 224 YRAPELIFGATDYTSSIDVWSAGCVLAELL 253

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-AEVNGIGQTHH 558
           EV+    + +G G+FG VY+  +   S   VA+KK   V QD  K FK  E+  + +  H
Sbjct: 19  EVSYTDTKVIGNGSFGVVYQAKL-CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDH 72
Query: 559 KNLVRL-LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIA 609
            N+VRL   +   G+ +  VY  +    V   ++  ++   + +  + +         + 
Sbjct: 73  CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTAIRGTKG 668
             L Y+H      I H DIKPQN+LLD D    ++ DFG AK L   +   N +   ++ 
Sbjct: 133 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY 187
Query: 669 YVAPEW-FRNMPITVKVDVYSYGVLLLEII 697
           Y APE  F     T  +DV+S G +L E++
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELL 217

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 36/207 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS--EKEFKAEVNGIGQTHHKNLVRLLG 566
           +G GA+G+V    ++  S   VA+KKL+  FQ     K    E+  +    H+N++ LL 
Sbjct: 50  VGSGAYGSVCSA-IDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLD 108
Query: 567 YCDEGQNR------LLVYEFMSNG--TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
                 +        LV  FM      +    F + K  +     +   +  GL Y+H  
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQY-----LVYQMLKGLKYIH-- 161
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               ++H D+KP N+ +++    +I DFGLA+       H +  +    GYV   W+R  
Sbjct: 162 -SAGVVHRDLKPGNLAVNEDCELKILDFGLAR-------HADAEM---TGYVVTRWYRAP 210
Query: 679 PITVK-------VDVYSYGVLLLEIIC 698
            + +        VD++S G ++ E++ 
Sbjct: 211 EVILSWMHYNQTVDIWSVGCIMAEMLT 237

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-AEVNGIGQTHH 558
           EV+    + +G G+FG VY+  +   S   VA+KK   V QD  K FK  E+  + +  H
Sbjct: 57  EVSYTDTKVIGNGSFGVVYQAKL-CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDH 110
Query: 559 KNLVRL-LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIA 609
            N+VRL   +   G+ +  VY  +    V   ++  ++   + +  + +         + 
Sbjct: 111 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 170
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTAIRGTKG 668
             L Y+H      I H DIKPQN+LLD D    ++ DFG AK L   +   N +   ++ 
Sbjct: 171 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY 225
Query: 669 YVAPEW-FRNMPITVKVDVYSYGVLLLEII 697
           Y APE  F     T  +DV+S G +L E++
Sbjct: 226 YRAPELIFGATDYTSSIDVWSAGCVLAELL 255

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 11/160 (6%)
Query: 546 FKAEVNGIGQTHHKNLVRLLGYCDE----GQNRLLVYEFMSNGTVASFLFGDSKPNWKLR 601
           F+ E       +H  +V +    +     G    +V E++   T+   +  +     K  
Sbjct: 59  FRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 602 TEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT 661
            E+       L + H+     IIH D+KP NI++      ++ DFG+A+ +  D  ++ T
Sbjct: 119 IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIA-DSGNSVT 174
Query: 662 ---AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC 698
              A+ GT  Y++PE  R   +  + DVYS G +L E++ 
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-AEVNGIGQTHH 558
           EV+    + +G G+FG VY+  +   S   VA+KK   V QD  K FK  E+  + +  H
Sbjct: 20  EVSYTDTKVIGNGSFGVVYQAKL-CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDH 73
Query: 559 KNLVRL-LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIA 609
            N+VRL   +   G+ +  VY  +    V   ++  ++   + +  + +         + 
Sbjct: 74  CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 133
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTAIRGTKG 668
             L Y+H      I H DIKPQN+LLD D    ++ DFG AK L   +   N +   ++ 
Sbjct: 134 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY 188
Query: 669 YVAPEW-FRNMPITVKVDVYSYGVLLLEII 697
           Y APE  F     T  +DV+S G +L E++
Sbjct: 189 YRAPELIFGATDYTSSIDVWSAGCVLAELL 218

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-AEVNGIGQTHH 558
           EV+    + +G G+FG VY+  +   S   VA+KK   V QD  K FK  E+  + +  H
Sbjct: 32  EVSYTDTKVIGNGSFGVVYQAKL-CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDH 85
Query: 559 KNLVRL-LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIA 609
            N+VRL   +   G+ +  VY  +    V   ++  ++   + +  + +         + 
Sbjct: 86  CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 145
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTAIRGTKG 668
             L Y+H      I H DIKPQN+LLD D    ++ DFG AK L   +   N +   ++ 
Sbjct: 146 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY 200
Query: 669 YVAPEW-FRNMPITVKVDVYSYGVLLLEII 697
           Y APE  F     T  +DV+S G +L E++
Sbjct: 201 YRAPELIFGATDYTSSIDVWSAGCVLAELL 230

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 83/201 (41%), Gaps = 13/201 (6%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEK---EFKAEVNGIGQTHHKNLVR 563
           E LG G    V+    ++     VAVK L +           F+ E       +H  +V 
Sbjct: 18  EILGFGGMSEVHLAR-DLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVA 76
Query: 564 LL----GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEEC 619
           +          G    +V E++   T+   +  +     K   E+       L + H+  
Sbjct: 77  VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG 136
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLL--TLDQSHTNTAIRGTKGYVAPEWFRN 677
              IIH D+KP NIL+      ++ DFG+A+ +  + +      A+ GT  Y++PE  R 
Sbjct: 137 ---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARG 193
Query: 678 MPITVKVDVYSYGVLLLEIIC 698
             +  + DVYS G +L E++ 
Sbjct: 194 DSVDARSDVYSLGCVLYEVLT 214

>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 99/212 (46%), Gaps = 37/212 (17%)
Query: 506 KEELGRGAFGT-VYKGFVNMGSSNHVAVKKLNS---VFQDSEKEFKAEVNGIGQTHHKNL 561
           K+ LG GA GT VY+G   M  +  VAVK++      F D E +   E +      H N+
Sbjct: 29  KDVLGHGAEGTIVYRG---MFDNRDVAVKRILPECFSFADREVQLLRESD-----EHPNV 80
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFL--FGDSKPNWKLRTE---IAMGIAGGLFYLH 616
           +R   +C E   +   +++++    A+ L  + + K    L  E   +      GL +LH
Sbjct: 81  IRY--FCTEKDRQ---FQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH 135
Query: 617 EECCTQIIHCDIKPQNILLD-----DHYNARISDFGLAKLLTLDQS--HTNTAIRGTKGY 669
                 I+H D+KP NIL+          A ISDFGL K L + +      + + GT+G+
Sbjct: 136 S---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGW 192
Query: 670 VAPEWF----RNMPITVKVDVYSYGVLLLEII 697
           +APE      +  P T  VD++S G +   +I
Sbjct: 193 IAPEMLSEDCKENP-TYTVDIFSAGCVFYYVI 223

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 85/202 (42%), Gaps = 15/202 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEK---EFKAEVNGIGQTHHKNLVR 563
           E LG G    V+    ++     VAVK L +           F+ E       +H  +V 
Sbjct: 18  EILGFGGMSEVHLAR-DLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVA 76
Query: 564 LL----GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEEC 619
           +          G    +V E++   T+   +  +     K   E+       L + H+  
Sbjct: 77  VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG 136
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT---AIRGTKGYVAPEWFR 676
              IIH D+KP NI++      ++ DFG+A+ +  D  ++ T   A+ GT  Y++PE  R
Sbjct: 137 ---IIHRDVKPANIMISATNAVKVMDFGIARAIA-DSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 677 NMPITVKVDVYSYGVLLLEIIC 698
              +  + DVYS G +L E++ 
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLT 214

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-AEVNGIGQTHH 558
           EV+    + +G G+FG VY+  +   S   VA+KK   V QD  K FK  E+  + +  H
Sbjct: 19  EVSYTDTKVIGNGSFGVVYQAKL-CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDH 72
Query: 559 KNLVRL-LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIA 609
            N+VRL   +   G+ +  VY  +    V   ++  ++   + +  + +         + 
Sbjct: 73  CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTAIRGTKG 668
             L Y+H      I H DIKPQN+LLD D    ++ DFG AK L   +   N +   ++ 
Sbjct: 133 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY 187
Query: 669 YVAPEW-FRNMPITVKVDVYSYGVLLLEII 697
           Y APE  F     T  +DV+S G +L E++
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELL 217

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 85/202 (42%), Gaps = 15/202 (7%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEK---EFKAEVNGIGQTHHKNLVR 563
           E LG G    V+    ++     VAVK L +           F+ E       +H  +V 
Sbjct: 18  EILGFGGMSEVHLAR-DLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVA 76
Query: 564 LL----GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEEC 619
           +          G    +V E++   T+   +  +     K   E+       L + H+  
Sbjct: 77  VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG 136
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT---AIRGTKGYVAPEWFR 676
              IIH D+KP NI++      ++ DFG+A+ +  D  ++ T   A+ GT  Y++PE  R
Sbjct: 137 ---IIHRDVKPANIMISATNAVKVMDFGIARAIA-DSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 677 NMPITVKVDVYSYGVLLLEIIC 698
              +  + DVYS G +L E++ 
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLT 214

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 94/201 (46%), Gaps = 11/201 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHV---AVKKLNSVFQDSEKEF-KAEVNGIGQTHHKNLVRL 564
           +GRG++  V    V +  ++ +    V K   V  D + ++ + E +   Q  +   +  
Sbjct: 60  IGRGSYAKVL--LVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 117
Query: 565 LGYCDEGQNRLL-VYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           L  C + ++RL  V E+++ G +   +    K   +     +  I+  L YLHE     I
Sbjct: 118 LHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG---I 174
Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVK 683
           I+ D+K  N+LLD   + +++D+G+ K   L    T +   GT  Y+APE  R       
Sbjct: 175 IYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSTFCGTPNYIAPEILRGEDYGFS 233
Query: 684 VDVYSYGVLLLEIICLRRNID 704
           VD ++ GVL+ E++  R   D
Sbjct: 234 VDWWALGVLMFEMMAGRSPFD 254

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEK--EFKAEVNGIGQTHHKNLVRL 564
           +++G G+FG             +V +K++N     S++  E + EV  +    H N+V+ 
Sbjct: 30  QKIGEGSFGKAILVKSTEDGRQYV-IKEINISRMSSKEREESRREVAVLANMKHPNIVQY 88
Query: 565 LGYCDEGQNRLLVYEFMSNGTV-------ASFLFG-DSKPNWKLRTEIAMGIAGGLFYLH 616
               +E  +  +V ++   G +          LF  D   +W ++  +A      L ++H
Sbjct: 89  RESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA------LKHVH 142
Query: 617 EECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR 676
           +    +I+H DIK QNI L      ++ DFG+A++L          I GT  Y++PE   
Sbjct: 143 DR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACI-GTPYYLSPEICE 198
Query: 677 NMPITVKVDVYSYGVLLLEIICLRRNID 704
           N P   K D+++ G +L E+  L+   +
Sbjct: 199 NKPYNNKSDIWALGCVLYELCTLKHAFE 226

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-AEVNGIGQTHH 558
           EV+    + +G G+FG VY+  +   S   VA+KK   V QD  K FK  E+  + +  H
Sbjct: 24  EVSYTDTKVIGNGSFGVVYQAKL-CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDH 77
Query: 559 KNLVRL-LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIA 609
            N+VRL   +   G+ +  VY  +    V   ++  ++   + +  + +         + 
Sbjct: 78  CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 137
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTAIRGTKG 668
             L Y+H      I H DIKPQN+LLD D    ++ DFG AK L   +   N +   ++ 
Sbjct: 138 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY 192
Query: 669 YVAPEW-FRNMPITVKVDVYSYGVLLLEII 697
           Y APE  F     T  +DV+S G +L E++
Sbjct: 193 YRAPELIFGATDYTSSIDVWSAGCVLAELL 222

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-AEVNGIGQTHH 558
           EV+    + +G G+FG VY+  +   S   VA+KK   V QD  K FK  E+  + +  H
Sbjct: 19  EVSYTDTKVIGNGSFGVVYQAKL-CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDH 72
Query: 559 KNLVRL-LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIA 609
            N+VRL   +   G+ +  VY  +    V   ++  ++   + +  + +         + 
Sbjct: 73  CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTAIRGTKG 668
             L Y+H      I H DIKPQN+LLD D    ++ DFG AK L   +   N +   ++ 
Sbjct: 133 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY 187
Query: 669 YVAPEW-FRNMPITVKVDVYSYGVLLLEII 697
           Y APE  F     T  +DV+S G +L E++
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELL 217

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 7/126 (5%)
Query: 576 LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILL 635
           +V E++   T+   +  +     K   E+       L + H+     IIH D+KP NI++
Sbjct: 93  IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMI 149
Query: 636 DDHYNARISDFGLAKLLTLDQSHTNT---AIRGTKGYVAPEWFRNMPITVKVDVYSYGVL 692
                 ++ DFG+A+ +  D  ++ T   A+ GT  Y++PE  R   +  + DVYS G +
Sbjct: 150 SATNAVKVMDFGIARAIA-DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 208
Query: 693 LLEIIC 698
           L E++ 
Sbjct: 209 LYEVLT 214

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 10/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYC 568
           +GRG++G V K  V  G+    A KK+   F +    FK E+  +    H N++RL    
Sbjct: 34  IGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF 92
Query: 569 DEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDI 628
           ++  +  LV E  + G +   +             I   +   + Y H+     + H D+
Sbjct: 93  EDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHK---LNVAHRDL 149
Query: 629 KPQNIL-LDDHYNA--RISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
           KP+N L L D  ++  ++ DFGLA      +        GT  YV+P+    +    + D
Sbjct: 150 KPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV--GTPYYVSPQVLEGL-YGPECD 206
Query: 686 VYSYGVLLLEIIC 698
            +S GV++  ++C
Sbjct: 207 EWSAGVMMYVLLC 219

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 96/202 (47%), Gaps = 21/202 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKLN--SVFQDSEKE-FKAEVNGIGQTHHKNLVRL 564
           +GRGAFG V    V + +++ V A+K LN   + + +E   F+ E + +     K +  L
Sbjct: 82  IGRGAFGEV--AVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTL 139
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFL--FGDSKPNWKLRTEIA-MGIA-GGLFYLHEECC 620
                +  N  LV ++   G + + L  F D  P    R  +A M IA   +  LH    
Sbjct: 140 HYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH---- 195
Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP- 679
              +H DIKP NIL+D + + R++DFG    L  D +  ++   GT  Y++PE  + M  
Sbjct: 196 --YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEG 253
Query: 680 ----ITVKVDVYSYGVLLLEII 697
                  + D +S GV + E++
Sbjct: 254 GKGRYGPECDWWSLGVCMYEML 275

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-AEVNGIGQTHH 558
           EV+    + +G G+FG VY+  +   S   VA+KK   V QD  K FK  E+  + +  H
Sbjct: 23  EVSYTDTKVIGNGSFGVVYQAKL-CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDH 76
Query: 559 KNLVRL-LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIA 609
            N+VRL   +   G+ +  VY  +    V   ++  ++   + +  + +         + 
Sbjct: 77  CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 136
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTAIRGTKG 668
             L Y+H      I H DIKPQN+LLD D    ++ DFG AK L   +   N +   ++ 
Sbjct: 137 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY 191
Query: 669 YVAPEW-FRNMPITVKVDVYSYGVLLLEII 697
           Y APE  F     T  +DV+S G +L E++
Sbjct: 192 YRAPELIFGATDYTSSIDVWSAGCVLAELL 221

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 96/215 (44%), Gaps = 25/215 (11%)
Query: 493 FTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVN 551
           + Y+E V      +  LGRG+FG V++   +  +    AVKK+   VF+  E    A ++
Sbjct: 65  YEYREEVHWMT-HQPRLGRGSFGEVHR-MKDKQTGFQCAVKKVRLEVFRVEELVACAGLS 122
Query: 552 GIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAG- 610
                    +V L G   EG    +  E +  G++   +    K    L  + A+   G 
Sbjct: 123 S------PRIVPLYGAVREGPWVNIFMELLEGGSLGQLI----KQMGCLPEDRALYYLGQ 172
Query: 611 ---GLFYLHEECCTQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLD----QSHTNTA 662
              GL YLH     +I+H D+K  N+LL  D   A + DFG A  L  D       T   
Sbjct: 173 ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 229
Query: 663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEII 697
           I GT+ ++APE     P   KVD++S   ++L ++
Sbjct: 230 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHML 264

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-AEVNGIGQTHH 558
           EV+    + +G G+FG VY+  +   S   VA+KK   V QD  K FK  E+  + +  H
Sbjct: 98  EVSYTDTKVIGNGSFGVVYQAKL-CDSGELVAIKK---VLQD--KRFKNRELQIMRKLDH 151
Query: 559 KNLVRL-LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIA 609
            N+VRL   +   G+ +  VY  +    V   ++  ++   + +  + +         + 
Sbjct: 152 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 211
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTAIRGTKG 668
             L Y+H      I H DIKPQN+LLD D    ++ DFG AK L   +   N +   ++ 
Sbjct: 212 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY 266
Query: 669 YVAPEW-FRNMPITVKVDVYSYGVLLLEII 697
           Y APE  F     T  +DV+S G +L E++
Sbjct: 267 YRAPELIFGATDYTSSIDVWSAGCVLAELL 296

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 31/216 (14%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE-FKAEVNGIGQTHHKNLVRLL-G 566
           LGRG FG V++    +   N+ A+K++    ++  +E    EV  + +  H  +VR    
Sbjct: 13  LGRGGFGVVFEAKNKVDDCNY-AIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNA 71
Query: 567 YCDEGQNRLL------VYEFMS-----NGTVASFLFGDSKPNWKLRT---EIAMGIAGGL 612
           + ++     L      VY ++         +  ++ G      + R+    I + IA  +
Sbjct: 72  WLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAV 131
Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT-----------NT 661
            +LH +    ++H D+KP NI        ++ DFGL   +  D+              +T
Sbjct: 132 EFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHT 188
Query: 662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEII 697
              GTK Y++PE       + KVD++S G++L E++
Sbjct: 189 GQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 7/126 (5%)
Query: 576 LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILL 635
           +V E++   T+   +  +     K   E+       L + H+     IIH D+KP NI++
Sbjct: 110 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMI 166
Query: 636 DDHYNARISDFGLAKLLTLDQSHTNT---AIRGTKGYVAPEWFRNMPITVKVDVYSYGVL 692
                 ++ DFG+A+ +  D  ++ T   A+ GT  Y++PE  R   +  + DVYS G +
Sbjct: 167 SATNAVKVMDFGIARAIA-DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV 225
Query: 693 LLEIIC 698
           L E++ 
Sbjct: 226 LYEVLT 231

>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 124/296 (41%), Gaps = 56/296 (18%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH-HKNLVRLLGY 567
           LG G+ GTV   F        VAVK++   F D       E+  + ++  H N++R   Y
Sbjct: 23  LGYGSSGTVV--FQGSFQGRPVAVKRMLIDFCDIAL---MEIKLLTESDDHPNVIRY--Y 75
Query: 568 CDEGQNRLLVYEF-MSNGTVASFLFGD--SKPNWKLRTE-----IAMGIAGGLFYLHEEC 619
           C E  +R L     + N  +   +     S  N KL+ E     +   IA G+ +LH   
Sbjct: 76  CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH--- 132
Query: 620 CTQIIHCDIKPQNILLD-------------DHYNARISDFGLAKLLTLDQSHTNTAIR-- 664
             +IIH D+KPQNIL+              ++    ISDFGL K L   QS   T +   
Sbjct: 133 SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNP 192
Query: 665 -GTKGYVAPEWFR-------NMPITVKVDVYSYGVLLLEIICLRRN-IDNEISKVDKAIL 715
            GT G+ APE             +T  +D++S G +   I+   ++   ++ S+    I 
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIR 252
Query: 716 TDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ 771
             ++ D             +++ +++ +++     +    I  DP  RPT  KV +
Sbjct: 253 GIFSLD-------------EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 91/196 (46%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +M + NH A+K L+       KE +  +N    +   +   LV+L 
Sbjct: 49  LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLE 107
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E+   G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 161
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+++D     +++DFGLAK +          + GT  Y+APE   +     
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGLAKRV----KGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 218 AVDWWALGVLIYEMAA 233

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 89/199 (44%), Gaps = 24/199 (12%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           LGRG+FG V++   +  +    AVKK+   VF+  E    A +          +V L G 
Sbjct: 101 LGRGSFGEVHR-MEDKQTGFQCAVKKVRLEVFRAEELMACAGLTS------PRIVPLYGA 153
Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAG----GLFYLHEECCTQI 623
             EG    +  E +  G++   +    K    L  + A+   G    GL YLH     +I
Sbjct: 154 VREGPWVNIFMELLEGGSLGQLV----KEQGCLPEDRALYYLGQALEGLEYLHSR---RI 206
Query: 624 IHCDIKPQNILLD-DHYNARISDFGLAKLLTLD----QSHTNTAIRGTKGYVAPEWFRNM 678
           +H D+K  N+LL  D  +A + DFG A  L  D       T   I GT+ ++APE     
Sbjct: 207 LHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGR 266
Query: 679 PITVKVDVYSYGVLLLEII 697
               KVDV+S   ++L ++
Sbjct: 267 SCDAKVDVWSSCCMMLHML 285

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 96/215 (44%), Gaps = 25/215 (11%)
Query: 493 FTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVN 551
           + Y+E V      +  +GRG+FG V++   +  +    AVKK+   VF+  E    A ++
Sbjct: 51  YEYREEVHWMT-HQPRVGRGSFGEVHR-MKDKQTGFQCAVKKVRLEVFRVEELVACAGLS 108
Query: 552 GIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAG- 610
                    +V L G   EG    +  E +  G++   +    K    L  + A+   G 
Sbjct: 109 S------PRIVPLYGAVREGPWVNIFMELLEGGSLGQLI----KQMGCLPEDRALYYLGQ 158
Query: 611 ---GLFYLHEECCTQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLD----QSHTNTA 662
              GL YLH     +I+H D+K  N+LL  D   A + DFG A  L  D       T   
Sbjct: 159 ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 215
Query: 663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEII 697
           I GT+ ++APE     P   KVD++S   ++L ++
Sbjct: 216 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHML 250

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           +G G+FG V     +M + NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 49  IGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E+M  G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 108 FSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 161
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +     
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 218 AVDWWALGVLIYEMAA 233

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 91/196 (46%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +M + NH A+K L+       KE +  +N    +   +   LV+L 
Sbjct: 49  LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLE 107
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E+   G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 161
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+++D     +++DFGLAK +          + GT  Y+APE   +     
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGLAKRV----KGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 218 AVDWWALGVLIYEMAA 233

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 31/213 (14%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVK-----KLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           E +G+G F  V +  +N  +    AVK     K  S    S ++ K E +      H ++
Sbjct: 32  EVIGKGPFSVVRR-CINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 90
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV---------ASFLFGDSKPNWKLRTEIAMGIAGGL 612
           V LL          +V+EFM    +         A F++ ++  +  +R      I   L
Sbjct: 91  VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ-----ILEAL 145
Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNA---RISDFGLAKLLTLDQSHTNTAIR-GTKG 668
            Y H+     IIH D+KP  +LL    N+   ++  FG+A  + L +S      R GT  
Sbjct: 146 RYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVA--IQLGESGLVAGGRVGTPH 200
Query: 669 YVAPEWFRNMPITVKVDVYSYGVLLLEII--CL 699
           ++APE  +  P    VDV+  GV+L  ++  CL
Sbjct: 201 FMAPEVVKREPYGKPVDVWGCGVILFILLSGCL 233

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           +G G+FG V     +M + NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 49  IGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E+M  G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 108 FSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 161
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +     
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 218 AVDWWALGVLIYEMAA 233

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 7/201 (3%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNS--VFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           LG+G FG V        +  + A+K L    +    E       N + Q      +  L 
Sbjct: 156 LGKGTFGKVIL-VKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 214
Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI-AMGIAGGLFYLHEECCTQIIH 625
           Y  +  +RL      +NG    F     +   + R       I   L YLH E    +++
Sbjct: 215 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE--KNVVY 272
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D+K +N++LD   + +I+DFGL K    D +   T   GT  Y+APE   +      VD
Sbjct: 273 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC-GTPEYLAPEVLEDNDYGRAVD 331
Query: 686 VYSYGVLLLEIICLRRNIDNE 706
            +  GV++ E++C R    N+
Sbjct: 332 WWGLGVVMYEMMCGRLPFYNQ 352

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 89/199 (44%), Gaps = 24/199 (12%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           LGRG+FG V++   +  +    AVKK+   VF+  E    A +          +V L G 
Sbjct: 82  LGRGSFGEVHR-MEDKQTGFQCAVKKVRLEVFRAEELMACAGLTS------PRIVPLYGA 134
Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAG----GLFYLHEECCTQI 623
             EG    +  E +  G++   +    K    L  + A+   G    GL YLH     +I
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLV----KEQGCLPEDRALYYLGQALEGLEYLHSR---RI 187
Query: 624 IHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSH----TNTAIRGTKGYVAPEWFRNM 678
           +H D+K  N+LL  D  +A + DFG A  L  D       T   I GT+ ++APE     
Sbjct: 188 LHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGR 247
Query: 679 PITVKVDVYSYGVLLLEII 697
               KVDV+S   ++L ++
Sbjct: 248 SCDAKVDVWSSCCMMLHML 266

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 82/195 (42%), Gaps = 7/195 (3%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNS--VFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           LG+G FG V        +  + A+K L    +    E       N + Q      +  L 
Sbjct: 159 LGKGTFGKVIL-VKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 217
Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI-AMGIAGGLFYLHEECCTQIIH 625
           Y  +  +RL      +NG    F     +   + R       I   L YLH E    +++
Sbjct: 218 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE--KNVVY 275
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D+K +N++LD   + +I+DFGL K    D +   T   GT  Y+APE   +      VD
Sbjct: 276 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC-GTPEYLAPEVLEDNDYGRAVD 334
Query: 686 VYSYGVLLLEIICLR 700
            +  GV++ E++C R
Sbjct: 335 WWGLGVVMYEMMCGR 349

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 41/214 (19%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-FQDSEKEFKAEVNGIGQTHHKNLVRL--- 564
           +G GA+G V   + ++  +  VA+KK++    Q   +    E+  + +  H+N++ +   
Sbjct: 51  IGEGAYGMVSSAYDHVRKTR-VAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDI 109
Query: 565 ---------------LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIA 609
                              +    +LL  + +SN  +  FL+                I 
Sbjct: 110 LRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQ---------------IL 154
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN--TAIRGTK 667
            GL Y+H      ++H D+KP N+L++   + +I DFGLA++   +  HT   T    T+
Sbjct: 155 RGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATR 211
Query: 668 GYVAPEWFRNMP-ITVKVDVYSYGVLLLEIICLR 700
            Y APE   N    T  +D++S G +L E++  R
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 96/215 (44%), Gaps = 25/215 (11%)
Query: 493 FTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVN 551
           + Y+E V      +  +GRG+FG V++   +  +    AVKK+   VF+  E    A ++
Sbjct: 67  YEYREEVHWMT-HQPRVGRGSFGEVHR-MKDKQTGFQCAVKKVRLEVFRVEELVACAGLS 124
Query: 552 GIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAG- 610
                    +V L G   EG    +  E +  G++   +    K    L  + A+   G 
Sbjct: 125 S------PRIVPLYGAVREGPWVNIFMELLEGGSLGQLI----KQMGCLPEDRALYYLGQ 174
Query: 611 ---GLFYLHEECCTQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLD----QSHTNTA 662
              GL YLH     +I+H D+K  N+LL  D   A + DFG A  L  D       T   
Sbjct: 175 ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 231
Query: 663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEII 697
           I GT+ ++APE     P   KVD++S   ++L ++
Sbjct: 232 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHML 266

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 93/213 (43%), Gaps = 31/213 (14%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVK-----KLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           E +G+G F  V +  +N  +    AVK     K  S    S ++ K E +      H ++
Sbjct: 30  EVIGKGPFSVVRRC-INRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 88
Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTV---------ASFLFGDSKPNWKLRTEIAMGIAGGL 612
           V LL          +V+EFM    +         A F++ ++  +  +R      I   L
Sbjct: 89  VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ-----ILEAL 143
Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNA---RISDFGLAKLLTLDQSHTNTAIR-GTKG 668
            Y H+     IIH D+KP  +LL    N+   ++  FG+A  + L +S      R GT  
Sbjct: 144 RYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFGVA--IQLGESGLVAGGRVGTPH 198
Query: 669 YVAPEWFRNMPITVKVDVYSYGVLLLEII--CL 699
           ++APE  +  P    VDV+  GV+L  ++  CL
Sbjct: 199 FMAPEVVKREPYGKPVDVWGCGVILFILLSGCL 231

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +M + NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 49  LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E+++ G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 161
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +     
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 218 AVDWWALGVLIYEMAA 233

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 31/207 (14%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKLN--SVFQDSEKE-FKAE----VNGIGQTHHKN 560
           +GRGAFG V    V M ++  + A+K LN   + + +E   F+ E    VNG  Q     
Sbjct: 82  IGRGAFGEV--AVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ----- 134
Query: 561 LVRLLGYCDEGQNRL-LVYEFMSNGTVASFL--FGDSKPNWKLRTEIAMGIAG--GLFYL 615
            +  L Y  + +N L LV ++   G + + L  F D  P    R  I   +     +  L
Sbjct: 135 WITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQL 194
Query: 616 HEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF 675
           H       +H DIKP N+LLD + + R++DFG    +  D +  ++   GT  Y++PE  
Sbjct: 195 H------YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEIL 248
Query: 676 RNMPITV-----KVDVYSYGVLLLEII 697
           + M   +     + D +S GV + E++
Sbjct: 249 QAMEDGMGKYGPECDWWSLGVCMYEML 275

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 94/194 (48%), Gaps = 17/194 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +M + NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 35  LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 93
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E++  G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 94  FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 147
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+L+D     +++DFG AK +   +  T T + GT  Y+APE   +     
Sbjct: 148 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWT-LCGTPEYLAPEIILSKGYNK 203
Query: 683 KVDVYSYGVLLLEI 696
            VD ++ GVL+ E+
Sbjct: 204 AVDWWALGVLIYEM 217

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +M + NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 50  LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E++  G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 162
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+L+D     +++DFG AK +   +  T T + GT  Y+APE   +     
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV---KGRTWT-LCGTPEYLAPEIILSKGYNK 218
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 219 AVDWWALGVLIYEMAA 234

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 27/205 (13%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKLN--SVFQDSEKE-FKAE----VNGIGQTHHKN 560
           +GRGAFG V    V M ++  + A+K LN   + + +E   F+ E    VNG  Q     
Sbjct: 98  IGRGAFGEV--AVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ----- 150
Query: 561 LVRLLGYCDEGQNRL-LVYEFMSNGTVASFL--FGDSKPNWKLRTEIAMGIAGGLFYLHE 617
            +  L Y  + +N L LV ++   G + + L  F D  P    R  I   +   +  +H+
Sbjct: 151 WITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLA-IDSIHQ 209
Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                 +H DIKP N+LLD + + R++DFG    +  D +  ++   GT  Y++PE  + 
Sbjct: 210 ---LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQA 266
Query: 678 MPITV-----KVDVYSYGVLLLEII 697
           M   +     + D +S GV + E++
Sbjct: 267 MEDGMGKYGPECDWWSLGVCMYEML 291

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 75/173 (43%), Gaps = 23/173 (13%)
Query: 603 EIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA 662
           +IA+ I   L +LH +    +IH D+KP N+L++     +  DFG++  L  D +    A
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 663 IRGTKGYVAPEW----FRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW 718
             G K Y APE           +VK D++S G+  +E+  LR   D+            W
Sbjct: 198 --GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDS------------W 243
Query: 719 AYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ 771
                Q   L+ +VE     +        FV     C++++   RPT  ++ Q
Sbjct: 244 GTPFQQ---LKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQ 293

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 7/201 (3%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNS--VFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           LG+G FG V        +  + A+K L    +    E       N + Q      +  L 
Sbjct: 18  LGKGTFGKVIL-VKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 76
Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI-AMGIAGGLFYLHEECCTQIIH 625
           Y  +  +RL      +NG    F     +   + R       I   L YLH E    +++
Sbjct: 77  YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE--KNVVY 134
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D+K +N++LD   + +I+DFGL K    D + T     GT  Y+APE   +      VD
Sbjct: 135 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKXFCGTPEYLAPEVLEDNDYGRAVD 193
Query: 686 VYSYGVLLLEIICLRRNIDNE 706
            +  GV++ E++C R    N+
Sbjct: 194 WWGLGVVMYEMMCGRLPFYNQ 214

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 7/201 (3%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNS--VFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           LG+G FG V        +  + A+K L    +    E       N + Q      +  L 
Sbjct: 16  LGKGTFGKVIL-VKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 74
Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI-AMGIAGGLFYLHEECCTQIIH 625
           Y  +  +RL      +NG    F     +   + R       I   L YLH E    +++
Sbjct: 75  YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE--KNVVY 132
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D+K +N++LD   + +I+DFGL K    D + T     GT  Y+APE   +      VD
Sbjct: 133 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKXFCGTPEYLAPEVLEDNDYGRAVD 191
Query: 686 VYSYGVLLLEIICLRRNIDNE 706
            +  GV++ E++C R    N+
Sbjct: 192 WWGLGVVMYEMMCGRLPFYNQ 212

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +  S NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 49  LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E+++ G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 161
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +     
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLXGTPEYLAPEIILSKGYNK 217
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 218 AVDWWALGVLIYEMAA 233

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 7/201 (3%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNS--VFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           LG+G FG V        +  + A+K L    +    E       N + Q      +  L 
Sbjct: 17  LGKGTFGKVIL-VKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 75
Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI-AMGIAGGLFYLHEECCTQIIH 625
           Y  +  +RL      +NG    F     +   + R       I   L YLH E    +++
Sbjct: 76  YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE--KNVVY 133
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D+K +N++LD   + +I+DFGL K    D + T     GT  Y+APE   +      VD
Sbjct: 134 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKXFCGTPEYLAPEVLEDNDYGRAVD 192
Query: 686 VYSYGVLLLEIICLRRNIDNE 706
            +  GV++ E++C R    N+
Sbjct: 193 WWGLGVVMYEMMCGRLPFYNQ 213

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 85/202 (42%), Gaps = 10/202 (4%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNS---VFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG V        +  + A+K L     + +D       E   +  T H  L   L
Sbjct: 13  LGKGTFGKVIL-VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT-AL 70
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI-AMGIAGGLFYLHEECCTQII 624
            Y  +  +RL      +NG    F     +   + R       I   L YLH      ++
Sbjct: 71  KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDVV 127
Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKV 684
           + DIK +N++LD   + +I+DFGL K    D +   T   GT  Y+APE   +      V
Sbjct: 128 YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC-GTPEYLAPEVLEDNDYGRAV 186
Query: 685 DVYSYGVLLLEIICLRRNIDNE 706
           D +  GV++ E++C R    N+
Sbjct: 187 DWWGLGVVMYEMMCGRLPFYNQ 208

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 85/202 (42%), Gaps = 10/202 (4%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNS---VFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG V        +  + A+K L     + +D       E   +  T H  L   L
Sbjct: 16  LGKGTFGKVIL-VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT-AL 73
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI-AMGIAGGLFYLHEECCTQII 624
            Y  +  +RL      +NG    F     +   + R       I   L YLH      ++
Sbjct: 74  KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDVV 130
Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKV 684
           + DIK +N++LD   + +I+DFGL K    D +   T   GT  Y+APE   +      V
Sbjct: 131 YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC-GTPEYLAPEVLEDNDYGRAV 189
Query: 685 DVYSYGVLLLEIICLRRNIDNE 706
           D +  GV++ E++C R    N+
Sbjct: 190 DWWGLGVVMYEMMCGRLPFYNQ 211

>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 122/292 (41%), Gaps = 52/292 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH-HKNLVRLLGY 567
           LG G+ GTV   F        VAVK++   F D       E+  + ++  H N++R   Y
Sbjct: 41  LGYGSSGTVV--FQGSFQGRPVAVKRMLIDFCDIAL---MEIKLLTESDDHPNVIRY--Y 93
Query: 568 CDEGQNRLLVYEF-MSNGTVASFLFGD--SKPNWKLRTE-----IAMGIAGGLFYLHEEC 619
           C E  +R L     + N  +   +     S  N KL+ E     +   IA G+ +LH   
Sbjct: 94  CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH--- 150
Query: 620 CTQIIHCDIKPQNILLD-------------DHYNARISDFGLAKLLTLDQSHTNTAIR-- 664
             +IIH D+KPQNIL+              ++    ISDFGL K L   Q      +   
Sbjct: 151 SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 210
Query: 665 -GTKGYVAPEWFRNMP---ITVKVDVYSYGVLLLEIICLRRN-IDNEISKVDKAILTDWA 719
            GT G+ APE         +T  +D++S G +   I+   ++   ++ S+    I   ++
Sbjct: 211 SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFS 270
Query: 720 YDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ 771
            D             +++ +++ +++     +    I  DP  RPT  KV +
Sbjct: 271 LD-------------EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 309

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +  S NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 49  LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E+++ G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 161
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +     
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLAGTPEYLAPEIILSKGYNK 217
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 218 AVDWWALGVLIYEMAA 233

>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 122/292 (41%), Gaps = 52/292 (17%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH-HKNLVRLLGY 567
           LG G+ GTV   F        VAVK++   F D       E+  + ++  H N++R   Y
Sbjct: 41  LGYGSSGTVV--FQGSFQGRPVAVKRMLIDFCDIAL---MEIKLLTESDDHPNVIRY--Y 93
Query: 568 CDEGQNRLLVYEF-MSNGTVASFLFGD--SKPNWKLRTE-----IAMGIAGGLFYLHEEC 619
           C E  +R L     + N  +   +     S  N KL+ E     +   IA G+ +LH   
Sbjct: 94  CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH--- 150
Query: 620 CTQIIHCDIKPQNILLD-------------DHYNARISDFGLAKLLTLDQSHTNTAIR-- 664
             +IIH D+KPQNIL+              ++    ISDFGL K L   Q      +   
Sbjct: 151 SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 210
Query: 665 -GTKGYVAPEWFRNMP---ITVKVDVYSYGVLLLEIICLRRN-IDNEISKVDKAILTDWA 719
            GT G+ APE         +T  +D++S G +   I+   ++   ++ S+    I   ++
Sbjct: 211 SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFS 270
Query: 720 YDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ 771
            D             +++ +++ +++     +    I  DP  RPT  KV +
Sbjct: 271 LD-------------EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 309

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +M + NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 49  LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E++  G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 161
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +     
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 218 AVDWWALGVLIYEMAA 233

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +M + NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 49  LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E++  G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 161
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +     
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 218 AVDWWALGVLIYEMAA 233

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 15/165 (9%)
Query: 541 DSEKEFKAEVNGIGQTHHKNLVRLLG--YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNW 598
           + E   K E+  + +  HKN+++L+   Y +E Q   +V E+   G        DS P  
Sbjct: 48  NGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEML---DSVPEK 104
Query: 599 KLRTEIAMG----IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLL-T 653
           +     A G    +  GL YLH +    I+H DIKP N+LL      +IS  G+A+ L  
Sbjct: 105 RFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHP 161
Query: 654 LDQSHTNTAIRGTKGYVAPEWFRNMPI--TVKVDVYSYGVLLLEI 696
                T    +G+  +  PE    +      KVD++S GV L  I
Sbjct: 162 FAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNI 206

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +M + NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 49  LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E++  G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 161
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +     
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 218 AVDWWALGVLIYEMAA 233

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ--DSEKEFKAEVNGIGQTHHKNLVRL 564
           E +G GA+G V      + +   VA+KK+ + F    + K    E+  +    H N++ +
Sbjct: 61  ETIGNGAYGVVSSARRRL-TGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAI 119
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGD-------SKP-NWKLRTEIAMGIAGGLFYLH 616
               D  +  +   EF S   V   +  D       S+P   +        +  GL Y+H
Sbjct: 120 ---KDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH 176
Query: 617 EECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLL---TLDQSHTNTAIRGTKGYVAPE 673
                Q+IH D+KP N+L++++   +I DFG+A+ L     +  +  T    T+ Y APE
Sbjct: 177 ---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 233
Query: 674 WFRNM-PITVKVDVYSYGVLLLEIICLRR 701
              ++   T  +D++S G +  E++  R+
Sbjct: 234 LMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 85/202 (42%), Gaps = 10/202 (4%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNS---VFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG V        +  + A+K L     + +D       E   +  T H  L   L
Sbjct: 13  LGKGTFGKVIL-VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT-AL 70
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI-AMGIAGGLFYLHEECCTQII 624
            Y  +  +RL      +NG    F     +   + R       I   L YLH      ++
Sbjct: 71  KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDVV 127
Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKV 684
           + DIK +N++LD   + +I+DFGL K    D +   T   GT  Y+APE   +      V
Sbjct: 128 YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC-GTPEYLAPEVLEDNDYGRAV 186
Query: 685 DVYSYGVLLLEIICLRRNIDNE 706
           D +  GV++ E++C R    N+
Sbjct: 187 DWWGLGVVMYEMMCGRLPFYNQ 208

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 17/194 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +  S NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 36  LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 94
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E+++ G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 95  FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 148
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+L+D+    +++DFG AK +          + GT  Y+APE   +     
Sbjct: 149 LIYRDLKPENLLIDEQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNK 204
Query: 683 KVDVYSYGVLLLEI 696
            VD ++ GVL+ E+
Sbjct: 205 AVDWWALGVLIYEM 218

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 15/159 (9%)
Query: 545 EFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASF--LFGDSKPNWKLRT 602
           +FK E+  I    ++  +   G         ++YE+M N ++  F   F     N+    
Sbjct: 89  DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 603 EIAM------GIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ 656
            I +       +     Y+H E    I H D+KP NIL+D +   ++SDFG ++ + +D+
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYM-VDK 205
Query: 657 SHTNTAIRGTKGYVAPEWFRNMPIT--VKVDVYSYGVLL 693
               +  RGT  ++ PE+F N       KVD++S G+ L
Sbjct: 206 KIKGS--RGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 85/202 (42%), Gaps = 10/202 (4%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNS---VFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG V        +  + A+K L     + +D       E   +  T H  L   L
Sbjct: 18  LGKGTFGKVIL-VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT-AL 75
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI-AMGIAGGLFYLHEECCTQII 624
            Y  +  +RL      +NG    F     +   + R       I   L YLH      ++
Sbjct: 76  KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDVV 132
Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKV 684
           + DIK +N++LD   + +I+DFGL K    D + T     GT  Y+APE   +      V
Sbjct: 133 YRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLAPEVLEDNDYGRAV 191
Query: 685 DVYSYGVLLLEIICLRRNIDNE 706
           D +  GV++ E++C R    N+
Sbjct: 192 DWWGLGVVMYEMMCGRLPFYNQ 213

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +M + NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 50  LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E++  G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 162
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +     
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 219 AVDWWALGVLIYEMAA 234

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-AEVNGIGQTHH 558
           EV+    + +G G+FG VY+  +   S   VA+KK   V Q   K FK  E+  + +  H
Sbjct: 19  EVSYTDTKVIGNGSFGVVYQAKL-CDSGELVAIKK---VLQG--KAFKNRELQIMRKLDH 72
Query: 559 KNLVRL-LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIA 609
            N+VRL   +   G+ +  VY  +    V + ++  ++   + +  + +         + 
Sbjct: 73  CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTAIRGTKG 668
             L Y+H      I H DIKPQN+LLD D    ++ DFG AK L   +   N +   ++ 
Sbjct: 133 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRY 187
Query: 669 YVAPEW-FRNMPITVKVDVYSYGVLLLEII 697
           Y APE  F     T  +DV+S G +L E++
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELL 217

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 85/202 (42%), Gaps = 10/202 (4%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNS---VFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG V        +  + A+K L     + +D       E   +  T H  L   L
Sbjct: 13  LGKGTFGKVIL-VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT-AL 70
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI-AMGIAGGLFYLHEECCTQII 624
            Y  +  +RL      +NG    F     +   + R       I   L YLH      ++
Sbjct: 71  KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDVV 127
Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKV 684
           + DIK +N++LD   + +I+DFGL K    D + T     GT  Y+APE   +      V
Sbjct: 128 YRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLAPEVLEDNDYGRAV 186
Query: 685 DVYSYGVLLLEIICLRRNIDNE 706
           D +  GV++ E++C R    N+
Sbjct: 187 DWWGLGVVMYEMMCGRLPFYNQ 208

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 85/202 (42%), Gaps = 10/202 (4%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNS---VFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG V        +  + A+K L     + +D       E   +  T H  L   L
Sbjct: 13  LGKGTFGKVIL-VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT-AL 70
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI-AMGIAGGLFYLHEECCTQII 624
            Y  +  +RL      +NG    F     +   + R       I   L YLH      ++
Sbjct: 71  KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDVV 127
Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKV 684
           + DIK +N++LD   + +I+DFGL K    D + T     GT  Y+APE   +      V
Sbjct: 128 YRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLAPEVLEDNDYGRAV 186
Query: 685 DVYSYGVLLLEIICLRRNIDNE 706
           D +  GV++ E++C R    N+
Sbjct: 187 DWWGLGVVMYEMMCGRLPFYNQ 208

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 85/202 (42%), Gaps = 10/202 (4%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNS---VFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG V        +  + A+K L     + +D       E   +  T H  L   L
Sbjct: 13  LGKGTFGKVIL-VREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLT-AL 70
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI-AMGIAGGLFYLHEECCTQII 624
            Y  +  +RL      +NG    F     +   + R       I   L YLH      ++
Sbjct: 71  KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDVV 127
Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKV 684
           + DIK +N++LD   + +I+DFGL K    D + T     GT  Y+APE   +      V
Sbjct: 128 YRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLAPEVLEDNDYGRAV 186
Query: 685 DVYSYGVLLLEIICLRRNIDNE 706
           D +  GV++ E++C R    N+
Sbjct: 187 DWWGLGVVMYEMMCGRLPFYNQ 208

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 21/209 (10%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ--DSEKEFKAEVNGIGQTHHKNLVRL 564
           E +G GA+G V      + +   VA+KK+ + F    + K    E+  +    H N++ +
Sbjct: 60  ETIGNGAYGVVSSARRRL-TGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAI 118
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGD-------SKP-NWKLRTEIAMGIAGGLFYLH 616
               D  +  +   EF S   V   +  D       S+P   +        +  GL Y+H
Sbjct: 119 ---KDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH 175
Query: 617 EECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLL---TLDQSHTNTAIRGTKGYVAPE 673
                Q+IH D+KP N+L++++   +I DFG+A+ L     +  +  T    T+ Y APE
Sbjct: 176 ---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPE 232
Query: 674 WFRNM-PITVKVDVYSYGVLLLEIICLRR 701
              ++   T  +D++S G +  E++  R+
Sbjct: 233 LMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +  S NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 70  LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 128
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E+++ G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 129 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 182
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +     
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGATWTLCGTPEYLAPEIILSKGYNK 238
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 239 AVDWWALGVLIYEMAA 254

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           +G G+FG V     +M + NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 49  IGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E++  G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 161
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +     
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 218 AVDWWALGVLIYEMAA 233

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 23/205 (11%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLN--------SVFQDSEKEFKAEVNGIGQTHHKN 560
           LG GA G V   F    +   VA+K ++        +   D     + E+  + + +H  
Sbjct: 17  LGSGACGEVKLAF-ERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 75
Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECC 620
           ++++  + D  ++  +V E M  G +   + G+ +            +   + YLHE   
Sbjct: 76  IIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE--- 131
Query: 621 TQIIHCDIKPQNILLDDHYN---ARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
             IIH D+KP+N+LL         +I+DFG +K+  L ++     + GT  Y+APE   +
Sbjct: 132 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRTLCGTPTYLAPEVLVS 189
Query: 678 MPIT---VKVDVYSYGVLLLEIICL 699
           +        VD +S GV+L   ICL
Sbjct: 190 VGTAGYNRAVDCWSLGVILF--ICL 212

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +  S NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 49  LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E+++ G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 161
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +     
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 218 AVDWWALGVLIYEMAA 233

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 23/205 (11%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLN--------SVFQDSEKEFKAEVNGIGQTHHKN 560
           LG GA G V   F    +   VA+K ++        +   D     + E+  + + +H  
Sbjct: 18  LGSGACGEVKLAF-ERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 76
Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECC 620
           ++++  + D  ++  +V E M  G +   + G+ +            +   + YLHE   
Sbjct: 77  IIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE--- 132
Query: 621 TQIIHCDIKPQNILLDDHYN---ARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
             IIH D+KP+N+LL         +I+DFG +K+  L ++     + GT  Y+APE   +
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRTLCGTPTYLAPEVLVS 190
Query: 678 MPIT---VKVDVYSYGVLLLEIICL 699
           +        VD +S GV+L   ICL
Sbjct: 191 VGTAGYNRAVDCWSLGVILF--ICL 213

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 86/199 (43%), Gaps = 22/199 (11%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK--AEVNG---IGQTHHKNLVR 563
           LG G++G V+K   +       AVK+  S F+  +   +  AEV     +GQ  H   VR
Sbjct: 65  LGHGSYGEVFK-VRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQ--HPCCVR 121
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASF-LFGDSKPN---WKLRTEIAMGIAGGLFYLHEEC 619
           L    +EG    L  E            +G S P    W    +  + +A    +LH + 
Sbjct: 122 LEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALA----HLHSQG 177
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP 679
              ++H D+KP NI L      ++ DFGL  L+ L  +       G   Y+APE  +   
Sbjct: 178 ---LVHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPRYMAPELLQGSY 232
Query: 680 ITVKVDVYSYGVLLLEIIC 698
            T   DV+S G+ +LE+ C
Sbjct: 233 GTA-ADVFSLGLTILEVAC 250

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-AEVNGIGQTHH 558
           EV+    + +G G+FG VY+  +   S   VA+KK   V Q   K FK  E+  + +  H
Sbjct: 19  EVSYTDTKVIGNGSFGVVYQAKL-CDSGELVAIKK---VLQG--KAFKNRELQIMRKLDH 72
Query: 559 KNLVRL-LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIA 609
            N+VRL   +   G+ +  VY  +    V   ++  ++   + +  + +         + 
Sbjct: 73  CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTAIRGTKG 668
             L Y+H      I H DIKPQN+LLD D    ++ DFG AK L   +   N +   ++ 
Sbjct: 133 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY 187
Query: 669 YVAPEW-FRNMPITVKVDVYSYGVLLLEII 697
           Y APE  F     T  +DV+S G +L E++
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELL 217

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 23/205 (11%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLN--------SVFQDSEKEFKAEVNGIGQTHHKN 560
           LG GA G V   F    +   VA+K ++        +   D     + E+  + + +H  
Sbjct: 18  LGSGACGEVKLAF-ERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 76
Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECC 620
           ++++  + D  ++  +V E M  G +   + G+ +            +   + YLHE   
Sbjct: 77  IIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE--- 132
Query: 621 TQIIHCDIKPQNILLDDHYN---ARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
             IIH D+KP+N+LL         +I+DFG +K+  L ++     + GT  Y+APE   +
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRTLCGTPTYLAPEVLVS 190
Query: 678 MPIT---VKVDVYSYGVLLLEIICL 699
           +        VD +S GV+L   ICL
Sbjct: 191 VGTAGYNRAVDCWSLGVILF--ICL 213

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 23/205 (11%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLN--------SVFQDSEKEFKAEVNGIGQTHHKN 560
           LG GA G V   F    +   VA+K ++        +   D     + E+  + + +H  
Sbjct: 18  LGSGACGEVKLAF-ERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 76
Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECC 620
           ++++  + D  ++  +V E M  G +   + G+ +            +   + YLHE   
Sbjct: 77  IIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE--- 132
Query: 621 TQIIHCDIKPQNILLDDHYN---ARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
             IIH D+KP+N+LL         +I+DFG +K+  L ++     + GT  Y+APE   +
Sbjct: 133 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRTLCGTPTYLAPEVLVS 190
Query: 678 MPIT---VKVDVYSYGVLLLEIICL 699
           +        VD +S GV+L   ICL
Sbjct: 191 VGTAGYNRAVDCWSLGVILF--ICL 213

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-AEVNGIGQTHH 558
           EV+    + +G G+FG VY+  +   S   VA+KK   V Q   K FK  E+  + +  H
Sbjct: 19  EVSYTDTKVIGNGSFGVVYQAKL-CDSGELVAIKK---VLQG--KAFKNRELQIMRKLDH 72
Query: 559 KNLVRL-LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--------GIA 609
            N+VRL   +   G+ +  VY  +    V   ++  ++   + +  + +         + 
Sbjct: 73  CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTAIRGTKG 668
             L Y+H      I H DIKPQN+LLD D    ++ DFG AK L   +   N +   ++ 
Sbjct: 133 RSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRY 187
Query: 669 YVAPEW-FRNMPITVKVDVYSYGVLLLEII 697
           Y APE  F     T  +DV+S G +L E++
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELL 217

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +  S NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 49  LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E+++ G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 161
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +     
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 218 AVDWWALGVLIYEMAA 233

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +  S NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 49  LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E+++ G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 161
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +     
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 218 AVDWWALGVLIYEMAA 233

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +  S NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 49  LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E+++ G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 161
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +     
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 218 AVDWWALGVLIYEMAA 233

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +  S NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 50  LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E+++ G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 109 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 162
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +     
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 219 AVDWWALGVLIYEMAA 234

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 23/205 (11%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLN--------SVFQDSEKEFKAEVNGIGQTHHKN 560
           LG GA G V   F    +   VA+K ++        +   D     + E+  + + +H  
Sbjct: 24  LGSGACGEVKLAF-ERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 82
Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECC 620
           ++++  + D  ++  +V E M  G +   + G+ +            +   + YLHE   
Sbjct: 83  IIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE--- 138
Query: 621 TQIIHCDIKPQNILLDDHYN---ARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
             IIH D+KP+N+LL         +I+DFG +K+  L ++     + GT  Y+APE   +
Sbjct: 139 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRTLCGTPTYLAPEVLVS 196
Query: 678 MPIT---VKVDVYSYGVLLLEIICL 699
           +        VD +S GV+L   ICL
Sbjct: 197 VGTAGYNRAVDCWSLGVILF--ICL 219

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +  S NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 49  LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E+++ G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 161
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +     
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 218 AVDWWALGVLIYEMAA 233

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 11/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +M + NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 49  LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
               +  N  +V E++  G + S L    +         A  I     YLH      +I+
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIY 164
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +      VD
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 686 VYSYGVLLLEIIC 698
            ++ GVL+ E+  
Sbjct: 221 WWALGVLIYEMAA 233

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 11/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +M + NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 50  LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
               +  N  +V E++  G + S L    +         A  I     YLH      +I+
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIY 165
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +      VD
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVD 221
Query: 686 VYSYGVLLLEIIC 698
            ++ GVL+ E+  
Sbjct: 222 WWALGVLIYEMAA 234

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +M + NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 49  LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E+   G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 161
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+++D     +++DFG AK +          + GT  Y+APE   +     
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 218 AVDWWALGVLIYEMAA 233

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 11/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +M + NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 49  LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
               +  N  +V E++  G + S L    +         A  I     YLH      +I+
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIY 164
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +      VD
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 686 VYSYGVLLLEIIC 698
            ++ GVL+ E+  
Sbjct: 221 WWALGVLIYEMAA 233

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 611 GLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV 670
           G+ YLH     ++IH D+K  N+ L+D  + +I DFGLA  +  D     T + GT  Y+
Sbjct: 154 GVQYLHN---NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYI 209
Query: 671 APEWFRNMPITVKVDVYSYGVLLLEII 697
           APE       + +VD++S G +L  ++
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLL 236

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +M + NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 49  LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E+   G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 161
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+++D     +++DFG AK +          + GT  Y+APE   +     
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 218 AVDWWALGVLIYEMAA 233

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 86/191 (45%), Gaps = 11/191 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +  S NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 49  LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
               +  N  +V E+++ G + S L    +         A  I     YLH      +I+
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIY 164
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +      VD
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 686 VYSYGVLLLEI 696
            ++ GVL+ E+
Sbjct: 221 WWALGVLIYEM 231

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +  S NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 49  LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E+++ G + S L   G  ++P+ +     A  I     YLH      
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF---YAAQIVLTFEYLH---SLD 161
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +     
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 218 AVDWWALGVLIYEMAA 233

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 11/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +  S NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 49  LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
               +  N  +V E+++ G + S L    +         A  I     YLH      +I+
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIY 164
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +      VD
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 686 VYSYGVLLLEIIC 698
            ++ GVL+ E+  
Sbjct: 221 WWALGVLIYEMAA 233

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 71/145 (48%), Gaps = 5/145 (3%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLVRLL 565
           ++LG G + TVYKG   + + N VA+K++    ++        EV+ +    H N+V L 
Sbjct: 8   DKLGEGTYATVYKGKSKL-TDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLH 66
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
                 ++  LV+E++            +  N          +  GL Y H +   +++H
Sbjct: 67  DIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLH 123
Query: 626 CDIKPQNILLDDHYNARISDFGLAK 650
            D+KPQN+L+++    +++DFGLA+
Sbjct: 124 RDLKPQNLLINERGELKLADFGLAR 148

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 11/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +  S NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 49  LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
               +  N  +V E+++ G + S L    +         A  I     YLH      +I+
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIY 164
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +      VD
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 686 VYSYGVLLLEIIC 698
            ++ GVL+ E+  
Sbjct: 221 WWALGVLIYEMAA 233

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 86/191 (45%), Gaps = 11/191 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +  S NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 44  LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 102
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
               +  N  +V E+++ G + S L    +         A  I     YLH      +I+
Sbjct: 103 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIY 159
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +      VD
Sbjct: 160 RDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVD 215
Query: 686 VYSYGVLLLEI 696
            ++ GVL+ E+
Sbjct: 216 WWALGVLIYEM 226

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 85/193 (44%), Gaps = 11/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +M + NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 49  LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
               +  N  +V E+   G + S L    +         A  I     YLH      +I+
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIY 164
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D+KP+N+++D     +++DFG AK +          + GT  Y+APE   +      VD
Sbjct: 165 RDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 686 VYSYGVLLLEIIC 698
            ++ GVL+ E+  
Sbjct: 221 WWALGVLIYEMAA 233

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 31/179 (17%)
Query: 608 IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA-IRGT 666
           +A G+ +L    C   IH D+  +NILL +    +I DFGLA+ +  D  +      R  
Sbjct: 200 VAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 667 KGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRN------IDNEISKVDKAILTDWAY 720
             ++APE   +   T++ DV+S+GVLL EI  L  +      ID E  +           
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR----------- 305
Query: 721 DRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEV 779
            R +E T     +     M   TML         C   +PS RPT  ++ + L  +++ 
Sbjct: 306 -RLKEGTRMRAPDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVEHLGNLLQA 354

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 31/179 (17%)
Query: 608 IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA-IRGT 666
           +A G+ +L    C   IH D+  +NILL +    +I DFGLA+ +  D  +      R  
Sbjct: 202 VAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 667 KGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRN------IDNEISKVDKAILTDWAY 720
             ++APE   +   T++ DV+S+GVLL EI  L  +      ID E  +           
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR----------- 307
Query: 721 DRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEV 779
            R +E T     +     M   TML         C   +PS RPT  ++ + L  +++ 
Sbjct: 308 -RLKEGTRMRAPDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVEHLGNLLQA 356

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 31/179 (17%)
Query: 608 IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA-IRGT 666
           +A G+ +L    C   IH D+  +NILL +    +I DFGLA+ +  D  +      R  
Sbjct: 209 VAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 667 KGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRN------IDNEISKVDKAILTDWAY 720
             ++APE   +   T++ DV+S+GVLL EI  L  +      ID E  +           
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR----------- 314
Query: 721 DRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEV 779
            R +E T     +     M   TML         C   +PS RPT  ++ + L  +++ 
Sbjct: 315 -RLKEGTRMRAPDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVEHLGNLLQA 363

>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 122/296 (41%), Gaps = 56/296 (18%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH-HKNLVRLLGY 567
           LG G+ GTV   F        VAVK++   F D       E+  + ++  H N++R   Y
Sbjct: 23  LGYGSSGTVV--FQGSFQGRPVAVKRMLIDFCDIAL---MEIKLLTESDDHPNVIRY--Y 75
Query: 568 CDEGQNRLLVYEF-MSNGTVASFLFGD--SKPNWKLRTE-----IAMGIAGGLFYLHEEC 619
           C E  +R L     + N  +   +     S  N KL+ E     +   IA G+ +LH   
Sbjct: 76  CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH--- 132
Query: 620 CTQIIHCDIKPQNILLD-------------DHYNARISDFGLAKLLTLDQSHTNTAIR-- 664
             +IIH D+KPQNIL+              ++    ISDFGL K L   Q      +   
Sbjct: 133 SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 192
Query: 665 -GTKGYVAPEWFR-------NMPITVKVDVYSYGVLLLEIICLRRN-IDNEISKVDKAIL 715
            GT G+ APE             +T  +D++S G +   I+   ++   ++ S+    I 
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIR 252
Query: 716 TDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ 771
             ++ D             +++ +++ +++     +    I  DP  RPT  KV +
Sbjct: 253 GIFSLD-------------EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +  S NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 49  LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E+++ G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 161
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +     
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ ++  
Sbjct: 218 AVDWWALGVLIYQMAA 233

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 11/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +  S NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 70  LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 128
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
               +  N  +V E+++ G + S L    +         A  I     YLH      +I+
Sbjct: 129 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIY 185
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +      VD
Sbjct: 186 RDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVD 241
Query: 686 VYSYGVLLLEIIC 698
            ++ GVL+ E+  
Sbjct: 242 WWALGVLIYEMAA 254

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +  S NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 49  LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E+++ G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 161
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+++D     +++DFG AK +          + GT  Y+APE   +     
Sbjct: 162 LIYRDLKPENLIIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIIISKGYNK 217
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 218 AVDWWALGVLIYEMAA 233

>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 98/212 (46%), Gaps = 31/212 (14%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT---HHKNLVR 563
           +++G+G +G V+ G         VAVK    VF  +E+        I QT    H+N++ 
Sbjct: 43  KQIGKGRYGEVWMG---KWRGEKVAVK----VFFTTEEASWFRETEIYQTVLMRHENILG 95
Query: 564 LLGYCDEGQNR----LLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEEC 619
            +    +G        L+ ++  NG++  +L   +  + K   ++A     GL +LH E 
Sbjct: 96  FIAADIKGTGSWTQLYLITDYHENGSLYDYL-KSTTLDAKSMLKLAYSSVSGLCHLHTEI 154
Query: 620 -CTQ----IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT----NTAIRGTKGYV 670
             TQ    I H D+K +NIL+  +    I+D GLA     D +      NT + GTK Y+
Sbjct: 155 FSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTKRYM 213
Query: 671 APEWF-----RN-MPITVKVDVYSYGVLLLEI 696
            PE       RN     +  D+YS+G++L E+
Sbjct: 214 PPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245

>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 106/228 (46%), Gaps = 43/228 (18%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-AEVNGIGQTHHKNLVRLL 565
           E +G+G +G V++G        +VAVK  +S  +D +  F+  E+       H+N++  +
Sbjct: 14  ECVGKGRYGEVWRG---SWQGENVAVKIFSS--RDEKSWFRETELYNTVMLRHENILGFI 68
Query: 566 GYCDEGQNR----LLVYEFMSNGTVASFLFGDSKPNWKLRT-------EIAMGIAGGLFY 614
                 ++      L+  +   G++  +L        +L T        I + IA GL +
Sbjct: 69  ASDMTSRHSSTQLWLITHYHEMGSLYDYL--------QLTTLDTVSCLRIVLSIASGLAH 120
Query: 615 LHEECC-TQ----IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT---NTAIRGT 666
           LH E   TQ    I H D+K +NIL+  +    I+D GLA + +   +     N    GT
Sbjct: 121 LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGT 180
Query: 667 KGYVAPEWFRNMPITV-------KVDVYSYGVLLLEIICLRRNIDNEI 707
           K Y+APE   +  I V       +VD++++G++L E+   RR + N I
Sbjct: 181 KRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEVA--RRMVSNGI 225

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 23/205 (11%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLN--------SVFQDSEKEFKAEVNGIGQTHHKN 560
           LG GA G V   F    +   VA++ ++        +   D     + E+  + + +H  
Sbjct: 143 LGSGACGEVKLAF-ERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 201
Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECC 620
           ++++  + D  ++  +V E M  G +   + G+ +            +   + YLHE   
Sbjct: 202 IIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE--- 257
Query: 621 TQIIHCDIKPQNILLDDHYN---ARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
             IIH D+KP+N+LL         +I+DFG +K+  L ++     + GT  Y+APE   +
Sbjct: 258 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRTLCGTPTYLAPEVLVS 315
Query: 678 MPIT---VKVDVYSYGVLLLEIICL 699
           +        VD +S GV+L   ICL
Sbjct: 316 VGTAGYNRAVDCWSLGVILF--ICL 338

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 23/205 (11%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLN--------SVFQDSEKEFKAEVNGIGQTHHKN 560
           LG GA G V   F    +   VA++ ++        +   D     + E+  + + +H  
Sbjct: 157 LGSGACGEVKLAF-ERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 215
Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECC 620
           ++++  + D  ++  +V E M  G +   + G+ +            +   + YLHE   
Sbjct: 216 IIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHE--- 271
Query: 621 TQIIHCDIKPQNILLDDHYN---ARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
             IIH D+KP+N+LL         +I+DFG +K+  L ++     + GT  Y+APE   +
Sbjct: 272 NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRTLCGTPTYLAPEVLVS 329
Query: 678 MPIT---VKVDVYSYGVLLLEIICL 699
           +        VD +S GV+L   ICL
Sbjct: 330 VGTAGYNRAVDCWSLGVILF--ICL 352

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 31/179 (17%)
Query: 608 IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA-IRGT 666
           +A G+ +L    C   IH D+  +NILL +    +I DFGLA+ +  D  +      R  
Sbjct: 207 VAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 667 KGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRN------IDNEISKVDKAILTDWAY 720
             ++APE   +   T++ DV+S+GVLL EI  L  +      ID E  +           
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR----------- 312
Query: 721 DRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEV 779
            R +E T     +     M   TML         C   +PS RPT  ++ + L  +++ 
Sbjct: 313 -RLKEGTRMRAPDYTTPEMYQ-TMLD--------CWHGEPSQRPTFSELVEHLGNLLQA 361

>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 106/228 (46%), Gaps = 43/228 (18%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-AEVNGIGQTHHKNLVRLL 565
           E +G+G +G V++G        +VAVK  +S  +D +  F+  E+       H+N++  +
Sbjct: 14  ECVGKGRYGEVWRG---SWQGENVAVKIFSS--RDEKSWFRETELYNTVMLRHENILGFI 68
Query: 566 GYCDEGQNR----LLVYEFMSNGTVASFLFGDSKPNWKLRT-------EIAMGIAGGLFY 614
                 ++      L+  +   G++  +L        +L T        I + IA GL +
Sbjct: 69  ASDMTSRHSSTQLWLITHYHEMGSLYDYL--------QLTTLDTVSCLRIVLSIASGLAH 120
Query: 615 LHEECC-TQ----IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT---NTAIRGT 666
           LH E   TQ    I H D+K +NIL+  +    I+D GLA + +   +     N    GT
Sbjct: 121 LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGT 180
Query: 667 KGYVAPEWFRNMPITV-------KVDVYSYGVLLLEIICLRRNIDNEI 707
           K Y+APE   +  I V       +VD++++G++L E+   RR + N I
Sbjct: 181 KRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEVA--RRMVSNGI 225

>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 106/228 (46%), Gaps = 43/228 (18%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-AEVNGIGQTHHKNLVRLL 565
           E +G+G +G V++G        +VAVK  +S  +D +  F+  E+       H+N++  +
Sbjct: 43  ECVGKGRYGEVWRG---SWQGENVAVKIFSS--RDEKSWFRETELYNTVMLRHENILGFI 97
Query: 566 GYCDEGQNR----LLVYEFMSNGTVASFLFGDSKPNWKLRT-------EIAMGIAGGLFY 614
                 ++      L+  +   G++  +L        +L T        I + IA GL +
Sbjct: 98  ASDMTSRHSSTQLWLITHYHEMGSLYDYL--------QLTTLDTVSCLRIVLSIASGLAH 149
Query: 615 LHEECC-TQ----IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT---NTAIRGT 666
           LH E   TQ    I H D+K +NIL+  +    I+D GLA + +   +     N    GT
Sbjct: 150 LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGT 209
Query: 667 KGYVAPEWFRNMPITV-------KVDVYSYGVLLLEIICLRRNIDNEI 707
           K Y+APE   +  I V       +VD++++G++L E+   RR + N I
Sbjct: 210 KRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEVA--RRMVSNGI 254

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 98/220 (44%), Gaps = 33/220 (15%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLV 562
            K  LG GA+G V     +  +   VA+KK+   F       +   E+  +    H+N++
Sbjct: 15  LKSLLGEGAYGVVCSA-THKPTGEIVAIKKIEP-FDKPLFALRTLREIKILKHFKHENII 72
Query: 563 RLLGY--CDEGQNRLLVY---EFMS---NGTVASFLFGDSKPNWKL-RTEIAMGIAGGLF 613
            +      D  +N   VY   E M    +  +++ +  D    + + +T  A+ +  G  
Sbjct: 73  TIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHG-- 130
Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLL---TLDQSHTNTAIRGTKGYV 670
                  + +IH D+KP N+L++ + + ++ DFGLA+++     D S       G   YV
Sbjct: 131 -------SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYV 183
Query: 671 APEWFRNMPITV-------KVDVYSYGVLLLEIICLRRNI 703
           A  W+R   + +        +DV+S G +L E+  LRR I
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF-LRRPI 222

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/237 (23%), Positives = 101/237 (42%), Gaps = 44/237 (18%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLV 562
            K  +GRG++G VY  + +  ++ +VA+KK+N +F+D    K    E+  + +     ++
Sbjct: 32  IKHLIGRGSYGYVYLAY-DKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYII 90
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWK---LRTE-----IAMGIAGGLFY 614
           RL            + +F     V      D K  +K     TE     I   +  G  +
Sbjct: 91  RLHDLIIPED----LLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKF 146
Query: 615 LHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS----------------- 657
           +HE   + IIH D+KP N LL+   + +I DFGLA+ +  D+                  
Sbjct: 147 IHE---SGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPG 203
Query: 658 -HTNTAIRGTKGYVAPEWFRNMPI-------TVKVDVYSYGVLLLEII-CLRRNIDN 705
            H     +    +V   W+R   +       T  +D++S G +  E++  ++ +I+N
Sbjct: 204 PHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINN 260

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +  + NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 49  LGTGSFGRVML-VKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E++  G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 161
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +     
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 218 AVDWWALGVLIYEMAA 233

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +  + NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 49  LGTGSFGRVML-VKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E++  G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 161
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +     
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 218 AVDWWALGVLIYEMAA 233

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +M + NH A+K L+       K+ +  +N    +   +   L +L 
Sbjct: 50  LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLE 108
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E+   G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 162
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+++D     +++DFG AK +          + GT  Y+APE   +     
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 219 AVDWWALGVLIYEMAA 234

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Query: 608 IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA-IRGT 666
           +A G+ +L    C   IH D+  +NILL ++   +I DFGLA+ +  +  +      R  
Sbjct: 208 VARGMEFLSSRKC---IHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 667 KGYVAPEWFRNMPITVKVDVYSYGVLLLEIICL 699
             ++APE   +   + K DV+SYGVLL EI  L
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSL 297

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 17/194 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +  + NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 42  LGTGSFGRVML-VKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 100
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E++  G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 101 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 154
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +     
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNK 210
Query: 683 KVDVYSYGVLLLEI 696
            VD ++ GVL+ E+
Sbjct: 211 AVDWWALGVLIYEM 224

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +M + NH A+K L+       K+ +  +N    +   +   L +L 
Sbjct: 50  LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLE 108
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E+   G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 162
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+++D     +++DFG AK +          + GT  Y+APE   +     
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 219 AVDWWALGVLIYEMAA 234

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +  + NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 49  LGTGSFGRVML-VKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E++  G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 161
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +     
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNK 217
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 218 AVDWWALGVLIYEMAA 233

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +  + NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 50  LGTGSFGRVML-VKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E++  G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 162
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +     
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 219 AVDWWALGVLIYEMAA 234

>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 99/214 (46%), Gaps = 31/214 (14%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-AEVNGIGQTHHKNLVR 563
            +E +G+G FG V++G         VAVK  +S  ++    F+ AE+       H+N++ 
Sbjct: 46  LQESIGKGRFGEVWRG---KWRGEEVAVKIFSS--REERSWFREAEIYQTVMLRHENILG 100
Query: 564 LLGYCDEGQNRL-----LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
            +   D   N       LV ++  +G++  +L        +   ++A+  A GL +LH E
Sbjct: 101 FIA-ADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHME 158
Query: 619 CC-TQ----IIHCDIKPQNILLDDHYNARISDFGLA-----KLLTLDQSHTNTAIRGTKG 668
              TQ    I H D+K +NIL+  +    I+D GLA        T+D +  +    GTK 
Sbjct: 159 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV--GTKR 216
Query: 669 YVAPEWF------RNMPITVKVDVYSYGVLLLEI 696
           Y+APE        ++     + D+Y+ G++  EI
Sbjct: 217 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250

>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 99/214 (46%), Gaps = 31/214 (14%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-AEVNGIGQTHHKNLVR 563
            +E +G+G FG V++G         VAVK  +S  ++    F+ AE+       H+N++ 
Sbjct: 7   LQESIGKGRFGEVWRG---KWRGEEVAVKIFSS--REERSWFREAEIYQTVMLRHENILG 61
Query: 564 LLGYCDEGQN-----RLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
            +   D   N       LV ++  +G++  +L        +   ++A+  A GL +LH E
Sbjct: 62  FIA-ADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHME 119
Query: 619 CC-TQ----IIHCDIKPQNILLDDHYNARISDFGLA-----KLLTLDQSHTNTAIRGTKG 668
              TQ    I H D+K +NIL+  +    I+D GLA        T+D +  +    GTK 
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV--GTKR 177
Query: 669 YVAPEWF------RNMPITVKVDVYSYGVLLLEI 696
           Y+APE        ++     + D+Y+ G++  EI
Sbjct: 178 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +  + NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 50  LGTGSFGRVML-VKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E++  G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 162
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +     
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 219 AVDWWALGVLIYEMAA 234

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +  + NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 50  LGTGSFGRVML-VKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E++  G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 162
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +     
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 219 AVDWWALGVLIYEMAA 234

>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 99/214 (46%), Gaps = 31/214 (14%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-AEVNGIGQTHHKNLVR 563
            +E +G+G FG V++G         VAVK  +S  ++    F+ AE+       H+N++ 
Sbjct: 8   LQESIGKGRFGEVWRG---KWRGEEVAVKIFSS--REERSWFREAEIYQTVMLRHENILG 62
Query: 564 LLGYCDEGQN-----RLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
            +   D   N       LV ++  +G++  +L        +   ++A+  A GL +LH E
Sbjct: 63  FIA-ADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHME 120
Query: 619 CC-TQ----IIHCDIKPQNILLDDHYNARISDFGLA-----KLLTLDQSHTNTAIRGTKG 668
              TQ    I H D+K +NIL+  +    I+D GLA        T+D +  +    GTK 
Sbjct: 121 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV--GTKR 178
Query: 669 YVAPEWF------RNMPITVKVDVYSYGVLLLEI 696
           Y+APE        ++     + D+Y+ G++  EI
Sbjct: 179 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +  + NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 70  LGTGSFGRVML-VKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 128
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E++  G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 129 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 182
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +     
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNK 238
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 239 AVDWWALGVLIYEMAA 254

>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 99/214 (46%), Gaps = 31/214 (14%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-AEVNGIGQTHHKNLVR 563
            +E +G+G FG V++G         VAVK  +S  ++    F+ AE+       H+N++ 
Sbjct: 33  LQESIGKGRFGEVWRG---KWRGEEVAVKIFSS--REERSWFREAEIYQTVMLRHENILG 87
Query: 564 LLGYCDEGQNRL-----LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
            +   D   N       LV ++  +G++  +L        +   ++A+  A GL +LH E
Sbjct: 88  FIA-ADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHME 145
Query: 619 CC-TQ----IIHCDIKPQNILLDDHYNARISDFGLA-----KLLTLDQSHTNTAIRGTKG 668
              TQ    I H D+K +NIL+  +    I+D GLA        T+D +  +    GTK 
Sbjct: 146 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV--GTKR 203
Query: 669 YVAPEWF------RNMPITVKVDVYSYGVLLLEI 696
           Y+APE        ++     + D+Y+ G++  EI
Sbjct: 204 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237

>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 99/214 (46%), Gaps = 31/214 (14%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-AEVNGIGQTHHKNLVR 563
            +E +G+G FG V++G         VAVK  +S  ++    F+ AE+       H+N++ 
Sbjct: 10  LQESIGKGRFGEVWRG---KWRGEEVAVKIFSS--REERSWFREAEIYQTVMLRHENILG 64
Query: 564 LLGYCDEGQNRL-----LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
            +   D   N       LV ++  +G++  +L        +   ++A+  A GL +LH E
Sbjct: 65  FIA-ADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHME 122
Query: 619 CC-TQ----IIHCDIKPQNILLDDHYNARISDFGLA-----KLLTLDQSHTNTAIRGTKG 668
              TQ    I H D+K +NIL+  +    I+D GLA        T+D +  +    GTK 
Sbjct: 123 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV--GTKR 180
Query: 669 YVAPEWF------RNMPITVKVDVYSYGVLLLEI 696
           Y+APE        ++     + D+Y+ G++  EI
Sbjct: 181 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 94/198 (47%), Gaps = 22/198 (11%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           LG G+F ++ +  V+  S+   AVK ++   + +++KE  A     G   H N+V+L   
Sbjct: 19  LGEGSF-SICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEG---HPNIVKLHEV 74
Query: 568 CDEGQNRLLVYEFMSNGTVASFL-----FGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
             +  +  LV E ++ G +   +     F +++ ++ +R      +   + ++H+     
Sbjct: 75  FHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRK-----LVSAVSHMHD---VG 126
Query: 623 IIHCDIKPQNILL---DDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP 679
           ++H D+KP+N+L    +D+   +I DFG A+L   D     T    T  Y APE      
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC-FTLHYAAPELLNQNG 185
Query: 680 ITVKVDVYSYGVLLLEII 697
                D++S GV+L  ++
Sbjct: 186 YDESCDLWSLGVILYTML 203

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 18/200 (9%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVK--KLNSVFQDSEKE------FKAEVNGIGQTHHKN 560
           LG GAFG V+   V+   +  V VK  K   V +D   E         E+  + +  H N
Sbjct: 32  LGSGAFGFVWTA-VDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHAN 90
Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP--NWKLRTEIAMGIAGGLFYLHEE 618
           ++++L   +      LV E   +G +  F F D  P  +  L + I   +   + YL   
Sbjct: 91  IIKVLDIFENQGFFQLVMEKHGSG-LDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLR-- 147
Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               IIH DIK +NI++ + +  ++ DFG A    L++        GT  Y APE     
Sbjct: 148 -LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAY--LERGKLFYTFCGTIEYCAPEVLMGN 204
Query: 679 PIT-VKVDVYSYGVLLLEII 697
           P    +++++S GV L  ++
Sbjct: 205 PYRGPELEMWSLGVTLYTLV 224

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 92/217 (42%), Gaps = 24/217 (11%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIG- 554
           KE +E        LG G FG+VY G + +  +  VA+K +    +D   ++    NG   
Sbjct: 3   KEPLESQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVE---KDRISDWGELPNGTRV 58
Query: 555 ----------QTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI 604
                      +    ++RLL + +   + +L+ E M        LF        L+ E+
Sbjct: 59  PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEP---VQDLFDFITERGALQEEL 115
Query: 605 AMGIAGGLFYLHEECCT-QIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTA 662
           A      +      C    ++H DIK +NIL+D +    ++ DFG   LL   +    T 
Sbjct: 116 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD 172
Query: 663 IRGTKGYVAPEWFRNMPITVK-VDVYSYGVLLLEIIC 698
             GT+ Y  PEW R      +   V+S G+LL +++C
Sbjct: 173 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 209

>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 99/214 (46%), Gaps = 31/214 (14%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK-AEVNGIGQTHHKNLVR 563
            +E +G+G FG V++G         VAVK  +S  ++    F+ AE+       H+N++ 
Sbjct: 13  LQESIGKGRFGEVWRG---KWRGEEVAVKIFSS--REERSWFREAEIYQTVMLRHENILG 67
Query: 564 LLGYCDEGQNRL-----LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
            +   D   N       LV ++  +G++  +L        +   ++A+  A GL +LH E
Sbjct: 68  FIA-ADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHME 125
Query: 619 CC-TQ----IIHCDIKPQNILLDDHYNARISDFGLA-----KLLTLDQSHTNTAIRGTKG 668
              TQ    I H D+K +NIL+  +    I+D GLA        T+D +  +    GTK 
Sbjct: 126 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRV--GTKR 183
Query: 669 YVAPEWF------RNMPITVKVDVYSYGVLLLEI 696
           Y+APE        ++     + D+Y+ G++  EI
Sbjct: 184 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +  S NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 49  LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E+++ G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 161
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+L+D     +++DFG AK +          + GT  Y+AP    +     
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPAIILSKGYNK 217
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 218 AVDWWALGVLIYEMAA 233

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 611 GLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV 670
           G+ YLH     ++IH D+K  N+ L+D  + +I DFGLA  +  D       + GT  Y+
Sbjct: 154 GVQYLHN---NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD-GERKKXLCGTPNYI 209
Query: 671 APEWFRNMPITVKVDVYSYGVLLLEII 697
           APE       + +VD++S G +L  ++
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLL 236

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKN---LVRLL 565
           LG G+FG V     +  + NH A+K L+       K+ +  +N        N   LV+L 
Sbjct: 50  LGTGSFGRVML-VKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLE 108
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E+   G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 109 FSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 162
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +     
Sbjct: 163 LIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 219 AVDWWALGVLIYEMAA 234

>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 101/236 (42%), Gaps = 38/236 (16%)
Query: 497 ELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQ- 555
           EL E+    +  L  G F  VY+   ++GS    A+K+L S  ++  +    EV  + + 
Sbjct: 24  ELGELRLRVRRVLAEGGFAFVYEA-QDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKL 82
Query: 556 THHKNLVRLLGYC-------DEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGI 608
           + H N+V+            D GQ   L+   +  G +  FL        + R  ++   
Sbjct: 83  SGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFL-----KKMESRGPLSCDT 137
Query: 609 AGGLFY--------LHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN 660
              +FY        +H +    IIH D+K +N+LL +    ++ DFG A  ++    ++ 
Sbjct: 138 VLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSW 196
Query: 661 TAIR-----------GTKGYVAPE---WFRNMPITVKVDVYSYGVLLLEIICLRRN 702
           +A R            T  Y  PE    + N PI  K D+++ G +L  ++C R++
Sbjct: 197 SAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILY-LLCFRQH 251

>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 93/213 (43%), Gaps = 34/213 (15%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ-----DSEKEFKAEVNGIGQTHHKNLVR 563
           LG GAFG V +   +     HVAVK + +V +      SE +    +N          V+
Sbjct: 22  LGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQ 81
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR--TEIAMGIAGGLFYLHEECCT 621
           +L + +   +  +V+E +   T   F+  +    ++L    ++A  I   + +LH     
Sbjct: 82  MLEWFEHHGHICIVFELLGLSTY-DFIKENGFLPFRLDHIRKMAYQICKSVNFLHS---N 137
Query: 622 QIIHCDIKPQNILL-----DDHYNARIS--------------DFGLAKLLTLDQSHTNTA 662
           ++ H D+KP+NIL       + YN +I               DFG A   T D  H +T 
Sbjct: 138 KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA---TYDDEHHSTL 194
Query: 663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLE 695
           +  T+ Y APE    +  +   DV+S G +L+E
Sbjct: 195 V-STRHYRAPEVILALGWSQPCDVWSIGCILIE 226

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 87/199 (43%), Gaps = 16/199 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ---DSEKEFKAEVNGIGQTHHKNLVRLL 565
           +GRGAFG V    V   S+  V   KL S F+    S+  F  E   I    +   V  L
Sbjct: 77  IGRGAFGEV--QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 134
Query: 566 GYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
            Y  +    L +V E+M  G + + +     P    R   A  +   L  +H       I
Sbjct: 135 FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA-EVVLALDAIH---SMGFI 190
Query: 625 HCDIKPQNILLDDHYNARISDFGL-AKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP---- 679
           H D+KP N+LLD   + +++DFG   K+        +TA+ GT  Y++PE  ++      
Sbjct: 191 HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGY 249
Query: 680 ITVKVDVYSYGVLLLEIIC 698
              + D +S GV L E++ 
Sbjct: 250 YGRECDWWSVGVFLYEMLV 268

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 85/191 (44%), Gaps = 11/191 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +  + NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 42  LGTGSFGRVML-VKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 100
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
               +  N  +V E++  G + S L    +         A  I     YLH      +I+
Sbjct: 101 FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIY 157
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D+KP+N+L+D     +++DFG AK +          + GT  Y+APE   +      VD
Sbjct: 158 RDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVD 213
Query: 686 VYSYGVLLLEI 696
            ++ GVL+ E+
Sbjct: 214 WWALGVLIYEM 224

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 87/199 (43%), Gaps = 16/199 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ---DSEKEFKAEVNGIGQTHHKNLVRLL 565
           +GRGAFG V    V   S+  V   KL S F+    S+  F  E   I    +   V  L
Sbjct: 82  IGRGAFGEV--QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 139
Query: 566 GYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
            Y  +    L +V E+M  G + + +     P    R   A  +   L  +H       I
Sbjct: 140 FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA-EVVLALDAIH---SMGFI 195
Query: 625 HCDIKPQNILLDDHYNARISDFGL-AKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP---- 679
           H D+KP N+LLD   + +++DFG   K+        +TA+ GT  Y++PE  ++      
Sbjct: 196 HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGY 254
Query: 680 ITVKVDVYSYGVLLLEIIC 698
              + D +S GV L E++ 
Sbjct: 255 YGRECDWWSVGVFLYEMLV 273

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 11/193 (5%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +M + NH A+K L+       K+ +  +N    +   +   L +L 
Sbjct: 50  LGTGSFGRVML-VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLE 108
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
               +  N  +V E+   G + S L    +         A  I     YLH      +I+
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIY 165
Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D+KP+N+++D     +++DFG AK +          + GT  Y+APE   +      VD
Sbjct: 166 RDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNKAVD 221
Query: 686 VYSYGVLLLEIIC 698
            ++ GVL+ E+  
Sbjct: 222 WWALGVLIYEMAA 234

>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 30/213 (14%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVK-----KLNSVFQDSEKEFKAEVNGIGQTHH---- 558
           +LG G F TV+    +M ++ HVA+K     K+ +   + E +    VN    T      
Sbjct: 26  KLGWGHFSTVWLA-KDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMG 84
Query: 559 -KNLVRLLGYCDE----GQNRLLVYEFMSNGTVASFLFGDSK--PNWKLRTEIAMGIAGG 611
             ++++LL + +     G + ++V+E +    +A     + +  P   ++ +I+  +  G
Sbjct: 85  ANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVK-QISKQLLLG 143
Query: 612 LFYLHEECCTQIIHCDIKPQNILL------DDHYNARISDFGLAKLLTLDQSHTNTAIRG 665
           L Y+H  C   IIH DIKP+N+L+      ++    +I+D G A     D+ +TN+    
Sbjct: 144 LDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--CWYDEHYTNSI--Q 197
Query: 666 TKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC 698
           T+ Y +PE     P     D++S   L+ E+I 
Sbjct: 198 TREYRSPEVLLGAPWGCGADIWSTACLIFELIT 230

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 87/199 (43%), Gaps = 16/199 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ---DSEKEFKAEVNGIGQTHHKNLVRLL 565
           +GRGAFG V    V   S+  V   KL S F+    S+  F  E   I    +   V  L
Sbjct: 82  IGRGAFGEV--QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 139
Query: 566 GYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
            Y  +    L +V E+M  G + + +     P    R   A  +   L  +H       I
Sbjct: 140 FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA-EVVLALDAIH---SMGFI 195
Query: 625 HCDIKPQNILLDDHYNARISDFGL-AKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP---- 679
           H D+KP N+LLD   + +++DFG   K+        +TA+ GT  Y++PE  ++      
Sbjct: 196 HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGDGY 254
Query: 680 ITVKVDVYSYGVLLLEIIC 698
              + D +S GV L E++ 
Sbjct: 255 YGRECDWWSVGVFLYEMLV 273

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 611 GLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV 670
           G+ YLH     ++IH D+K  N+ L+D  + +I DFGLA  +  D       + GT  Y+
Sbjct: 154 GVQYLHN---NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD-LCGTPNYI 209
Query: 671 APEWFRNMPITVKVDVYSYGVLLLEII 697
           APE       + +VD++S G +L  ++
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLL 236

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 611 GLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV 670
           G+ YLH     ++IH D+K  N+ L+D  + +I DFGLA  +  D       + GT  Y+
Sbjct: 138 GVQYLHN---NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD-GERKKDLCGTPNYI 193
Query: 671 APEWFRNMPITVKVDVYSYGVLLLEII 697
           APE       + +VD++S G +L  ++
Sbjct: 194 APEVLCKKGHSFEVDIWSLGCILYTLL 220

>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 30/213 (14%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVK-----KLNSVFQDSEKEFKAEVNGIGQTHH---- 558
           +LG G F TV+    +M ++ HVA+K     K+ +   + E +    VN    T      
Sbjct: 26  KLGWGHFSTVWLA-KDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMG 84
Query: 559 -KNLVRLLGYCDE----GQNRLLVYEFMSNGTVASFLFGDSK--PNWKLRTEIAMGIAGG 611
             ++++LL + +     G + ++V+E +    +A     + +  P   ++ +I+  +  G
Sbjct: 85  ANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVK-QISKQLLLG 143
Query: 612 LFYLHEECCTQIIHCDIKPQNILL------DDHYNARISDFGLAKLLTLDQSHTNTAIRG 665
           L Y+H  C   IIH DIKP+N+L+      ++    +I+D G A     D+ +TN+    
Sbjct: 144 LDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--CWYDEHYTNSI--Q 197
Query: 666 TKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC 698
           T+ Y +PE     P     D++S   L+ E+I 
Sbjct: 198 TREYRSPEVLLGAPWGCGADIWSTACLIFELIT 230

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 95/227 (41%), Gaps = 40/227 (17%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLV 562
            K  +GRG++G VY  + +  +  +VA+KK+N +F+D    K    E+  + +     ++
Sbjct: 30  IKHLIGRGSYGYVYLAY-DKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYII 88
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWK---LRTE-----IAMGIAGGLFY 614
           RL            + +F     V      D K  +K     TE     I   +  G  +
Sbjct: 89  RLYDLIIPDD----LLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENF 144
Query: 615 LHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS---------------HT 659
           +HE   + IIH D+KP N LL+   + ++ DFGLA+ +  ++                H 
Sbjct: 145 IHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHN 201
Query: 660 NTAIRGTKGYVAPEWFRNMPI-------TVKVDVYSYGVLLLEIICL 699
               +    +V   W+R   +       T  +D++S G +  E++ +
Sbjct: 202 KNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNM 248

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +  + NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 50  LGTGSFGRVML-VKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E+   G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 162
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+++D     +++DFG AK +          + GT  Y+APE   +     
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 219 AVDWWALGVLIYEMAA 234

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 98/254 (38%), Gaps = 56/254 (22%)
Query: 493 FTYKELVEVTRGF--KEELGRGAFGTVYKGFVNMGSS-NHVAVKKLNSVFQDSEKE---F 546
           F    L+E+ + +  K  +G+G++G V     N   +   + +   N + Q + K+    
Sbjct: 16  FQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERI 75
Query: 547 KAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS------------------------ 582
           K EV  + + HH N+ RL    ++ Q   LV E                           
Sbjct: 76  KTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVV 135
Query: 583 ---------------NGTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHC 626
                          NG++  F    D     KL + I   I   L YLH +    I H 
Sbjct: 136 KTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHR 192
Query: 627 DIKPQNILL--DDHYNARISDFGLAK---LLTLDQSHTNTAIRGTKGYVAPEWFR--NMP 679
           DIKP+N L   +  +  ++ DFGL+K    L   + +  T   GT  +VAPE     N  
Sbjct: 193 DIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNES 252
Query: 680 ITVKVDVYSYGVLL 693
              K D +S GVLL
Sbjct: 253 YGPKCDAWSAGVLL 266

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 77/174 (44%), Gaps = 18/174 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKLNS--VFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           +GRGAF  V    V M  +  V A+K +N   + +  E     E   +     +  +  L
Sbjct: 69  IGRGAFSEV--AVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQL 126
Query: 566 GYCDEGQNRL-LVYEFMSNGTVASFL--FGDSKPNWKLR---TEIAMGIAGGLFYLHEEC 619
            +  + +N L LV E+   G + + L  FG+  P    R    EI M I      +H   
Sbjct: 127 HFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDS----VHR-- 180
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE 673
               +H DIKP NILLD   + R++DFG    L  D +  +    GT  Y++PE
Sbjct: 181 -LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPE 233

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 17/196 (8%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNG---IGQTHHKNLVRLL 565
           LG G+FG V     +  S NH A+K L+       K+ +  +N    +   +   LV+L 
Sbjct: 49  LGTGSFGRVML-VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 566 GYCDEGQNRLLVYEFMSNGTVASFL--FGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
               +  N  +V E+++ G + S L   G  S+P+ +     A  I     YLH      
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF---YAAQIVLTFEYLH---SLD 161
Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +I+ D+KP+N+L+D     +++DFG AK +          + GT   +APE   +     
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTPEALAPEIILSKGYNK 217
Query: 683 KVDVYSYGVLLLEIIC 698
            VD ++ GVL+ E+  
Sbjct: 218 AVDWWALGVLIYEMAA 233

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 608 IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK 667
           I  G  YLH     ++IH D+K  N+ L++    +I DFGLA  +  D     T + GT 
Sbjct: 126 IVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTP 181
Query: 668 GYVAPEWFRNMPITVKVDVYSYGVLLLEII 697
            Y+APE       + +VDV+S G ++  ++
Sbjct: 182 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLL 211

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 88/198 (44%), Gaps = 20/198 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKL---NSVFQDSEKE-FKAEVNGIGQTHHKNLVRL 564
           LG+G F   ++  ++   +  V   K+   + + +  ++E    E++      H+++V  
Sbjct: 25  LGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 82
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASF-----LFGDSKPNWKLRTEIAMGIAGGLFYLHEEC 619
            G+ ++     +V E     ++           + +  + LR      I  G  YLH   
Sbjct: 83  HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ-----IVLGCQYLHR-- 135
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP 679
             ++IH D+K  N+ L++    +I DFGLA  +  D     T + GT  Y+APE      
Sbjct: 136 -NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKG 193
Query: 680 ITVKVDVYSYGVLLLEII 697
            + +VDV+S G ++  ++
Sbjct: 194 HSFEVDVWSIGCIMYTLL 211

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 33/220 (15%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLV 562
            K  LG GA+G V     +  +   VA+KK+   F       +   E+  +    H+N++
Sbjct: 15  LKSLLGEGAYGVVCSA-THKPTGEIVAIKKIEP-FDKPLFALRTLREIKILKHFKHENII 72
Query: 563 RLLGY--CDEGQNRLLVY---EFMS---NGTVASFLFGDSKPNWKL-RTEIAMGIAGGLF 613
            +      D  +N   VY   E M    +  +++ +  D    + + +T  A+ +  G  
Sbjct: 73  TIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHG-- 130
Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLL---TLDQSHTNTAIRGTKGYV 670
                  + +IH D+KP N+L++ + + ++ DFGLA+++     D S       G   +V
Sbjct: 131 -------SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFV 183
Query: 671 APEWFRNMPITV-------KVDVYSYGVLLLEIICLRRNI 703
           A  W+R   + +        +DV+S G +L E+  LRR I
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF-LRRPI 222

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 608 IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK 667
           I  G  YLH     ++IH D+K  N+ L++    +I DFGLA  +  D     T + GT 
Sbjct: 130 IVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTP 185
Query: 668 GYVAPEWFRNMPITVKVDVYSYGVLLLEII 697
            Y+APE       + +VDV+S G ++  ++
Sbjct: 186 NYIAPEVLSKKGHSFEVDVWSIGCIMYTLL 215

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 36/212 (16%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE-----FKAEVNGIGQTHHKNLV 562
           ++G+G FG V+K   +  +   VA+KK   V  ++EKE        E+  +    H+N+V
Sbjct: 24  KIGQGTFGEVFKA-RHRKTGQKVALKK---VLMENEKEGFPITALREIKILQLLKHENVV 79
Query: 563 RLLGYCDEGQ---NR-----LLVYEFMSN---GTVASFLFGDSKPNWKLRTEIAMGIAGG 611
            L+  C       NR      LV++F  +   G +++ L   +    K    +   +  G
Sbjct: 80  NLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK---RVMQMLLNG 136
Query: 612 LFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVA 671
           L+Y+H     +I+H D+K  N+L+      +++DFGLA+  +L +   N+        V 
Sbjct: 137 LYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAK---NSQPNRYXNRVV 190
Query: 672 PEWFRNMPITV-------KVDVYSYGVLLLEI 696
             W+R   + +        +D++  G ++ E+
Sbjct: 191 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 222

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 36/212 (16%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE-----FKAEVNGIGQTHHKNLV 562
           ++G+G FG V+K   +  +   VA+KK   V  ++EKE        E+  +    H+N+V
Sbjct: 25  KIGQGTFGEVFKA-RHRKTGQKVALKK---VLMENEKEGFPITALREIKILQLLKHENVV 80
Query: 563 RLLGYCDEGQ---NR-----LLVYEFMSN---GTVASFLFGDSKPNWKLRTEIAMGIAGG 611
            L+  C       NR      LV++F  +   G +++ L   +    K    +   +  G
Sbjct: 81  NLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIK---RVMQMLLNG 137
Query: 612 LFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVA 671
           L+Y+H     +I+H D+K  N+L+      +++DFGLA+  +L +   N+        V 
Sbjct: 138 LYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAK---NSQPNRYXNRVV 191
Query: 672 PEWFRNMPITV-------KVDVYSYGVLLLEI 696
             W+R   + +        +D++  G ++ E+
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 36/212 (16%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE-----FKAEVNGIGQTHHKNLV 562
           ++G+G FG V+K   +  +   VA+KK   V  ++EKE        E+  +    H+N+V
Sbjct: 25  KIGQGTFGEVFKA-RHRKTGQKVALKK---VLMENEKEGFPITALREIKILQLLKHENVV 80
Query: 563 RLLGYCDEGQ---NR-----LLVYEFMSN---GTVASFLFGDSKPNWKLRTEIAMGIAGG 611
            L+  C       NR      LV++F  +   G +++ L   +    K    +   +  G
Sbjct: 81  NLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK---RVMQMLLNG 137
Query: 612 LFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVA 671
           L+Y+H     +I+H D+K  N+L+      +++DFGLA+  +L +   N+        V 
Sbjct: 138 LYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAK---NSQPNRYXNRVV 191
Query: 672 PEWFRNMPITV-------KVDVYSYGVLLLEI 696
             W+R   + +        +D++  G ++ E+
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 56/226 (24%), Positives = 101/226 (44%), Gaps = 49/226 (21%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA---------------- 548
            K+E+G+G++G V   + N   + + A+K L+      +  F                  
Sbjct: 17  LKDEIGKGSYGVVKLAY-NENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQ 75
Query: 549 ----------EVNGIGQTHHKNLVRLLGYCDE-GQNRL-LVYEFMSNGTVASFLFGDSKP 596
                     E+  + +  H N+V+L+   D+  ++ L +V+E ++ G V         P
Sbjct: 76  PRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV------P 129
Query: 597 NWKLRTE-----IAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLA-K 650
             K  +E         +  G+ YLH +   +IIH DIKP N+L+ +  + +I+DFG++ +
Sbjct: 130 TLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNE 186
Query: 651 LLTLDQSHTNTAIRGTKGYVAPEWF---RNMPITVKVDVYSYGVLL 693
               D   +NT   GT  ++APE     R +     +DV++ GV L
Sbjct: 187 FKGSDALLSNTV--GTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 36/212 (16%)
Query: 508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE-----FKAEVNGIGQTHHKNLV 562
           ++G+G FG V+K   +  +   VA+KK   V  ++EKE        E+  +    H+N+V
Sbjct: 25  KIGQGTFGEVFKA-RHRKTGQKVALKK---VLMENEKEGFPITALREIKILQLLKHENVV 80
Query: 563 RLLGYCDEGQ---NR-----LLVYEFMSN---GTVASFLFGDSKPNWKLRTEIAMGIAGG 611
            L+  C       NR      LV++F  +   G +++ L   +    K    +   +  G
Sbjct: 81  NLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK---RVMQMLLNG 137
Query: 612 LFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVA 671
           L+Y+H     +I+H D+K  N+L+      +++DFGLA+  +L +   N+        V 
Sbjct: 138 LYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAK---NSQPNRYXNRVV 191
Query: 672 PEWFRNMPITV-------KVDVYSYGVLLLEI 696
             W+R   + +        +D++  G ++ E+
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 223

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 24/217 (11%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIG- 554
           KE +E        LG G FG+VY G + +  +  VA+K +    +D   ++    NG   
Sbjct: 4   KEPLESQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVE---KDRISDWGELPNGTRV 59
Query: 555 ----------QTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI 604
                      +    ++RLL + +   + +L+ E          LF        L+ E+
Sbjct: 60  PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEEL 116
Query: 605 AMGIAGGLFYLHEECCT-QIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTA 662
           A      +      C    ++H DIK +NIL+D +    ++ DFG   LL   +    T 
Sbjct: 117 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD 173
Query: 663 IRGTKGYVAPEWFRNMPITVK-VDVYSYGVLLLEIIC 698
             GT+ Y  PEW R      +   V+S G+LL +++C
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 210

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 24/217 (11%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIG- 554
           KE +E        LG G FG+VY G + +  +  VA+K +    +D   ++    NG   
Sbjct: 18  KEPLESQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVE---KDRISDWGELPNGTRV 73
Query: 555 ----------QTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI 604
                      +    ++RLL + +   + +L+ E          LF        L+ E+
Sbjct: 74  PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEEL 130
Query: 605 AMGIAGGLFYLHEECCT-QIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTA 662
           A      +      C    ++H DIK +NIL+D +    ++ DFG   LL   +    T 
Sbjct: 131 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD 187
Query: 663 IRGTKGYVAPEWFRNMPITVK-VDVYSYGVLLLEIIC 698
             GT+ Y  PEW R      +   V+S G+LL +++C
Sbjct: 188 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 224

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 24/217 (11%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIG- 554
           KE +E        LG G FG+VY G + +  +  VA+K +    +D   ++    NG   
Sbjct: 18  KEPLESQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVE---KDRISDWGELPNGTRV 73
Query: 555 ----------QTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI 604
                      +    ++RLL + +   + +L+ E          LF        L+ E+
Sbjct: 74  PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEEL 130
Query: 605 AMGIAGGLFYLHEECCT-QIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTA 662
           A      +      C    ++H DIK +NIL+D +    ++ DFG   LL   +    T 
Sbjct: 131 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD 187
Query: 663 IRGTKGYVAPEWFRNMPITVK-VDVYSYGVLLLEIIC 698
             GT+ Y  PEW R      +   V+S G+LL +++C
Sbjct: 188 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 224

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 24/217 (11%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIG- 554
           KE +E        LG G FG+VY G + +  +  VA+K +    +D   ++    NG   
Sbjct: 3   KEPLESQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVE---KDRISDWGELPNGTRV 58
Query: 555 ----------QTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI 604
                      +    ++RLL + +   + +L+ E          LF        L+ E+
Sbjct: 59  PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEEL 115
Query: 605 AMGIAGGLFYLHEECCT-QIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTA 662
           A      +      C    ++H DIK +NIL+D +    ++ DFG   LL   +    T 
Sbjct: 116 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD 172
Query: 663 IRGTKGYVAPEWFRNMPITVK-VDVYSYGVLLLEIIC 698
             GT+ Y  PEW R      +   V+S G+LL +++C
Sbjct: 173 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 209

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 24/204 (11%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIG-----------QTH 557
           LG G FG+VY G + +  +  VA+K +    +D   ++    NG              + 
Sbjct: 12  LGSGGFGSVYSG-IRVSDNLPVAIKHVE---KDRISDWGELPNGTRVPMEVVLLKKVSSG 67
Query: 558 HKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
              ++RLL + +   + +L+ E          LF        L+ E+A      +     
Sbjct: 68  FSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 618 ECCTQ-IIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF 675
            C    ++H DIK +NIL+D +    ++ DFG   LL   +    T   GT+ Y  PEW 
Sbjct: 125 HCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 181
Query: 676 RNMPITVK-VDVYSYGVLLLEIIC 698
           R      +   V+S G+LL +++C
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVC 205

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 24/217 (11%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIG- 554
           KE +E        LG G FG+VY G + +  +  VA+K +    +D   ++    NG   
Sbjct: 19  KEPLESQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVE---KDRISDWGELPNGTRV 74
Query: 555 ----------QTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI 604
                      +    ++RLL + +   + +L+ E          LF        L+ E+
Sbjct: 75  PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEEL 131
Query: 605 AMGIAGGLFYLHEECCT-QIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTA 662
           A      +      C    ++H DIK +NIL+D +    ++ DFG   LL   +    T 
Sbjct: 132 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD 188
Query: 663 IRGTKGYVAPEWFRNMPITVK-VDVYSYGVLLLEIIC 698
             GT+ Y  PEW R      +   V+S G+LL +++C
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 225

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 24/217 (11%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIG- 554
           KE +E        LG G FG+VY G + +  +  VA+K +    +D   ++    NG   
Sbjct: 4   KEPLESQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVE---KDRISDWGELPNGTRV 59
Query: 555 ----------QTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI 604
                      +    ++RLL + +   + +L+ E          LF        L+ E+
Sbjct: 60  PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEEL 116
Query: 605 AMGIAGGLFYLHEECCT-QIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTA 662
           A      +      C    ++H DIK +NIL+D +    ++ DFG   LL   +    T 
Sbjct: 117 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD 173
Query: 663 IRGTKGYVAPEWFRNMPITVK-VDVYSYGVLLLEIIC 698
             GT+ Y  PEW R      +   V+S G+LL +++C
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 210

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 24/217 (11%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIG- 554
           KE +E        LG G FG+VY G + +  +  VA+K +    +D   ++    NG   
Sbjct: 4   KEPLESQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVE---KDRISDWGELPNGTRV 59
Query: 555 ----------QTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI 604
                      +    ++RLL + +   + +L+ E          LF        L+ E+
Sbjct: 60  PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEEL 116
Query: 605 AMGIAGGLFYLHEECCT-QIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTA 662
           A      +      C    ++H DIK +NIL+D +    ++ DFG   LL   +    T 
Sbjct: 117 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD 173
Query: 663 IRGTKGYVAPEWFRNMPITVK-VDVYSYGVLLLEIIC 698
             GT+ Y  PEW R      +   V+S G+LL +++C
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 210

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 24/217 (11%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIG- 554
           KE +E        LG G FG+VY G + +  +  VA+K +    +D   ++    NG   
Sbjct: 19  KEPLESQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVE---KDRISDWGELPNGTRV 74
Query: 555 ----------QTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI 604
                      +    ++RLL + +   + +L+ E          LF        L+ E+
Sbjct: 75  PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEEL 131
Query: 605 AMGIAGGLFYLHEECCT-QIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTA 662
           A      +      C    ++H DIK +NIL+D +    ++ DFG   LL   +    T 
Sbjct: 132 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD 188
Query: 663 IRGTKGYVAPEWFRNMPITVK-VDVYSYGVLLLEIIC 698
             GT+ Y  PEW R      +   V+S G+LL +++C
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 225

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 16/201 (7%)
Query: 509 LGRGAFGTVY-----KGFVNMGSSNHVAVKKLNSVFQDSE--KEFKAEVNGIGQTHHKNL 561
           LG GA+G V+      G  + G    + V K  ++ Q ++  +  + E   +        
Sbjct: 62  LGTGAYGKVFLVRKISGH-DTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF 120
Query: 562 VRLLGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG-IAGGLFYLHEEC 619
           +  L Y  + + +L L+ ++++ G + + L    +   +   +I +G I   L +LH+  
Sbjct: 121 LVTLHYAFQTETKLHLILDYINGGELFTHL-SQRERFTEHEVQIYVGEIVLALEHLHK-- 177
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR--N 677
              II+ DIK +NILLD + +  ++DFGL+K    D++       GT  Y+AP+  R  +
Sbjct: 178 -LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGD 236
Query: 678 MPITVKVDVYSYGVLLLEIIC 698
                 VD +S GVL+ E++ 
Sbjct: 237 SGHDKAVDWWSLGVLMYELLT 257

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 14/105 (13%)
Query: 604 IAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH----- 658
           I + IA  + +LH +    ++H D+KP NI        ++ DFGL   +  D+       
Sbjct: 169 IFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 659 ------TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEII 697
                 T+    GTK Y++PE       + KVD++S G++L E++
Sbjct: 226 PMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 24/217 (11%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIG- 554
           KE +E        LG G FG+VY G + +  +  VA+K    V +D   ++    NG   
Sbjct: 32  KEPLESQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKH---VEKDRISDWGELPNGTRV 87
Query: 555 ----------QTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI 604
                      +    ++RLL + +   + +L+ E          LF        L+ E+
Sbjct: 88  PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEEL 144
Query: 605 AMGIAGGLFYLHEECCT-QIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTA 662
           A      +      C    ++H DIK +NIL+D +    ++ DFG   LL   +    T 
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD 201
Query: 663 IRGTKGYVAPEWFRNMPITVK-VDVYSYGVLLLEIIC 698
             GT+ Y  PEW R      +   V+S G+LL +++C
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 238

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 24/217 (11%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIG- 554
           KE +E        LG G FG+VY G + +  +  VA+K +    +D   ++    NG   
Sbjct: 19  KEPLESQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVE---KDRISDWGELPNGTRV 74
Query: 555 ----------QTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI 604
                      +    ++RLL + +   + +L+ E          LF        L+ E+
Sbjct: 75  PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEEL 131
Query: 605 AMGIAGGLFYLHEECCT-QIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTA 662
           A      +      C    ++H DIK +NIL+D +    ++ DFG   LL   +    T 
Sbjct: 132 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD 188
Query: 663 IRGTKGYVAPEWFRNMPITVK-VDVYSYGVLLLEIIC 698
             GT+ Y  PEW R      +   V+S G+LL +++C
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 225

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 24/217 (11%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIG- 554
           KE +E        LG G FG+VY G + +  +  VA+K +    +D   ++    NG   
Sbjct: 38  KEPLESQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVE---KDRISDWGELPNGTRV 93
Query: 555 ----------QTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI 604
                      +    ++RLL + +   + +L+ E          LF        L+ E+
Sbjct: 94  PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEEL 150
Query: 605 AMGIAGGLFYLHEECCT-QIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTA 662
           A      +      C    ++H DIK +NIL+D +    ++ DFG   LL   +    T 
Sbjct: 151 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD 207
Query: 663 IRGTKGYVAPEWFRNMPITVK-VDVYSYGVLLLEIIC 698
             GT+ Y  PEW R      +   V+S G+LL +++C
Sbjct: 208 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 244

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 24/217 (11%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIG- 554
           KE +E        LG G FG+VY G + +  +  VA+K    V +D   ++    NG   
Sbjct: 31  KEPLESQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKH---VEKDRISDWGELPNGTRV 86
Query: 555 ----------QTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI 604
                      +    ++RLL + +   + +L+ E          LF        L+ E+
Sbjct: 87  PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEEL 143
Query: 605 AMGIAGGLFYLHEECCT-QIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTA 662
           A      +      C    ++H DIK +NIL+D +    ++ DFG   LL   +    T 
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD 200
Query: 663 IRGTKGYVAPEWFRNMPITVK-VDVYSYGVLLLEIIC 698
             GT+ Y  PEW R      +   V+S G+LL +++C
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 237

>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3 Length = 357

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 36/214 (16%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKN------LV 562
           LG G FG V +   +    + VA+K + +V +  E   + E+N + +   K+       V
Sbjct: 36  LGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAA-RLEINVLKKIKEKDKENKFLCV 94
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR--TEIAMGIAGGLFYLHEECC 620
            +  + +   +  + +E +   T   FL  ++   + L     +A  +   L +LHE   
Sbjct: 95  LMSDWFNFHGHMCIAFELLGKNTF-EFLKENNFQPYPLPHVRHMAYQLCHALRFLHE--- 150
Query: 621 TQIIHCDIKPQNIL-----LDDHYNA--------------RISDFGLAKLLTLDQSHTNT 661
            Q+ H D+KP+NIL      +  YN               R++DFG A   T D  H +T
Sbjct: 151 NQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA---TFDHEH-HT 206
Query: 662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLE 695
            I  T+ Y  PE    +      DV+S G +L E
Sbjct: 207 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFE 240

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 24/217 (11%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIG- 554
           KE +E        LG G FG+VY G + +  +  VA+K    V +D   ++    NG   
Sbjct: 31  KEPLESQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKH---VEKDRISDWGELPNGTRV 86
Query: 555 ----------QTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI 604
                      +    ++RLL + +   + +L+ E          LF        L+ E+
Sbjct: 87  PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEEL 143
Query: 605 AMGIAGGLFYLHEECCT-QIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTA 662
           A      +      C    ++H DIK +NIL+D +    ++ DFG   LL   +    T 
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD 200
Query: 663 IRGTKGYVAPEWFRNMPITVK-VDVYSYGVLLLEIIC 698
             GT+ Y  PEW R      +   V+S G+LL +++C
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 237

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 24/217 (11%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIG- 554
           KE +E        LG G FG+VY G + +  +  VA+K    V +D   ++    NG   
Sbjct: 32  KEPLESQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKH---VEKDRISDWGELPNGTRV 87
Query: 555 ----------QTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI 604
                      +    ++RLL + +   + +L+ E          LF        L+ E+
Sbjct: 88  PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEEL 144
Query: 605 AMGIAGGLFYLHEECCT-QIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTA 662
           A      +      C    ++H DIK +NIL+D +    ++ DFG   LL   +    T 
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD 201
Query: 663 IRGTKGYVAPEWFRNMPITVK-VDVYSYGVLLLEIIC 698
             GT+ Y  PEW R      +   V+S G+LL +++C
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 238

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 24/217 (11%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIG- 554
           KE +E        LG G FG+VY G + +  +  VA+K +    +D   ++    NG   
Sbjct: 2   KEPLESQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVE---KDRISDWGELPNGTRV 57
Query: 555 ----------QTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI 604
                      +    ++RLL + +   + +L+ E          LF        L+ E+
Sbjct: 58  PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEEL 114
Query: 605 AMGIAGGLFYLHEECCT-QIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTA 662
           A      +      C    ++H DIK +NIL+D +    ++ DFG   LL   +    T 
Sbjct: 115 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD 171
Query: 663 IRGTKGYVAPEWFRNMPITVK-VDVYSYGVLLLEIIC 698
             GT+ Y  PEW R      +   V+S G+LL +++C
Sbjct: 172 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 208

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 97/220 (44%), Gaps = 33/220 (15%)
Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQTHHKNLV 562
            K  LG GA+G V     +  +   VA+KK+   F       +   E+  +    H+N++
Sbjct: 15  LKSLLGEGAYGVVCSA-THKPTGEIVAIKKIEP-FDKPLFALRTLREIKILKHFKHENII 72
Query: 563 RLLGY--CDEGQNRLLVY---EFMS---NGTVASFLFGDSKPNWKL-RTEIAMGIAGGLF 613
            +      D  +N   VY   E M    +  +++ +  D    + + +T  A+ +  G  
Sbjct: 73  TIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHG-- 130
Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLL---TLDQSHTNTAIRGTKGYV 670
                  + +IH D+KP N+L++ + + ++ DFGLA+++     D S       G    V
Sbjct: 131 -------SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXV 183
Query: 671 APEWFRNMPITV-------KVDVYSYGVLLLEIICLRRNI 703
           A  W+R   + +        +DV+S G +L E+  LRR I
Sbjct: 184 ATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF-LRRPI 222

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 24/217 (11%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIG- 554
           KE +E        LG G FG+VY G + +  +  VA+K    V +D   ++    NG   
Sbjct: 46  KEPLESQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKH---VEKDRISDWGELPNGTRV 101
Query: 555 ----------QTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI 604
                      +    ++RLL + +   + +L+ E          LF        L+ E+
Sbjct: 102 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEEL 158
Query: 605 AMGIAGGLFYLHEECCT-QIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTA 662
           A      +      C    ++H DIK +NIL+D +    ++ DFG   LL   +    T 
Sbjct: 159 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD 215
Query: 663 IRGTKGYVAPEWFRNMPITVK-VDVYSYGVLLLEIIC 698
             GT+ Y  PEW R      +   V+S G+LL +++C
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 252

>pdb|2EU9|A Chain A, Crystal Structure Of Clk3 Length = 355

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 36/214 (16%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKN------LV 562
           LG G FG V +   +    + VA+K + +V +  E   + E+N + +   K+       V
Sbjct: 27  LGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAA-RLEINVLKKIKEKDKENKFLCV 85
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR--TEIAMGIAGGLFYLHEECC 620
            +  + +   +  + +E +   T   FL  ++   + L     +A  +   L +LHE   
Sbjct: 86  LMSDWFNFHGHMCIAFELLGKNTF-EFLKENNFQPYPLPHVRHMAYQLCHALRFLHE--- 141
Query: 621 TQIIHCDIKPQNIL-----LDDHYNA--------------RISDFGLAKLLTLDQSHTNT 661
            Q+ H D+KP+NIL      +  YN               R++DFG A   T D  H +T
Sbjct: 142 NQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA---TFDHEH-HT 197
Query: 662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLE 695
            I  T+ Y  PE    +      DV+S G +L E
Sbjct: 198 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFE 231

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 24/217 (11%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIG- 554
           KE +E        LG G FG+VY G + +  +  VA+K +    +D   ++    NG   
Sbjct: 32  KEPLESQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVE---KDRISDWGELPNGTRV 87
Query: 555 ----------QTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI 604
                      +    ++RLL + +   + +L+ E          LF        L+ E+
Sbjct: 88  PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEEL 144
Query: 605 AMGIAGGLFYLHEECCT-QIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTA 662
           A      +      C    ++H DIK +NIL+D +    ++ DFG   LL   +    T 
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD 201
Query: 663 IRGTKGYVAPEWFRNMPITVK-VDVYSYGVLLLEIIC 698
             GT+ Y  PEW R      +   V+S G+LL +++C
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 238

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 24/217 (11%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIG- 554
           KE +E        LG G FG+VY G + +  +  VA+K +    +D   ++    NG   
Sbjct: 46  KEPLESQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVE---KDRISDWGELPNGTRV 101
Query: 555 ----------QTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI 604
                      +    ++RLL + +   + +L+ E          LF        L+ E+
Sbjct: 102 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEEL 158
Query: 605 AMGIAGGLFYLHEECCT-QIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTA 662
           A      +      C    ++H DIK +NIL+D +    ++ DFG   LL   +    T 
Sbjct: 159 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD 215
Query: 663 IRGTKGYVAPEWFRNMPITVK-VDVYSYGVLLLEIIC 698
             GT+ Y  PEW R      +   V+S G+LL +++C
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 252

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 24/217 (11%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIG- 554
           KE +E        LG G FG+VY G + +  +  VA+K +    +D   ++    NG   
Sbjct: 31  KEPLESQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVE---KDRISDWGELPNGTRV 86
Query: 555 ----------QTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI 604
                      +    ++RLL + +   + +L+ E          LF        L+ E+
Sbjct: 87  PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEEL 143
Query: 605 AMGIAGGLFYLHEECCT-QIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTA 662
           A      +      C    ++H DIK +NIL+D +    ++ DFG   LL   +    T 
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD 200
Query: 663 IRGTKGYVAPEWFRNMPITVK-VDVYSYGVLLLEIIC 698
             GT+ Y  PEW R      +   V+S G+LL +++C
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 237

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/247 (22%), Positives = 109/247 (44%), Gaps = 24/247 (9%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           E+LGRG FG V++         ++A  K   V    +   K E++ +    H+N++ L  
Sbjct: 11  EDLGRGEFGIVHRCVETSSKKTYMA--KFVKVKGTDQVLVKKEISILNIARHRNILHLHE 68
Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDS-KPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
             +  +  ++++EF+S   +   +   + + N +        +   L +LH      I H
Sbjct: 69  SFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGH 125
Query: 626 CDIKPQNILLDDHYNA--RISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVK 683
            DI+P+NI+     ++  +I +FG A+   L        +     Y APE  ++  ++  
Sbjct: 126 FDIRPENIIYQTRRSSTIKIIEFGQAR--QLKPGDNFRLLFTAPEYYAPEVHQHDVVSTA 183
Query: 684 VDVYSYGVLLLEIICLRRNIDNEISKVDKAIL-----TDWAYDRYQERTLEALVENDLEA 738
            D++S G L   +  L   I+  +++ ++ I+      ++ +D       EA  E  +EA
Sbjct: 184 TDMWSLGTL---VYVLLSGINPFLAETNQQIIENIMNAEYTFDE------EAFKEISIEA 234
Query: 739 MNNVTML 745
           M+ V  L
Sbjct: 235 MDFVDRL 241

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 24/204 (11%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIG-----------QTH 557
           LG G FG+VY G + +  +  VA+K +    +D   ++    NG              + 
Sbjct: 12  LGSGGFGSVYSG-IRVSDNLPVAIKHVE---KDRISDWGELPNGTRVPMEVVLLKKVSSG 67
Query: 558 HKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
              ++RLL + +   + +L+ E          LF        L+ E+A      +     
Sbjct: 68  FSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 618 ECCT-QIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF 675
            C    ++H DIK +NIL+D +    ++ DFG   LL   +    T   GT+ Y  PEW 
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 181
Query: 676 RNMPITVK-VDVYSYGVLLLEIIC 698
           R      +   V+S G+LL +++C
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVC 205

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 24/217 (11%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIG- 554
           KE +E        LG G FG+VY G + +  +  VA+K    V +D   ++    NG   
Sbjct: 32  KEPLESQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKH---VEKDRISDWGELPNGTRV 87
Query: 555 ----------QTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI 604
                      +    ++RLL + +   + +L+ E          LF        L+ E+
Sbjct: 88  PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEEL 144
Query: 605 AMGIAGGLFYLHEECCT-QIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTA 662
           A      +      C    ++H DIK +NIL+D +    ++ DFG   LL   +    T 
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD 201
Query: 663 IRGTKGYVAPEWFRNMPITVK-VDVYSYGVLLLEIIC 698
             GT+ Y  PEW R      +   V+S G+LL +++C
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 238

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 24/204 (11%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIG-----------QTH 557
           LG G FG+VY G + +  +  VA+K +    +D   ++    NG              + 
Sbjct: 12  LGSGGFGSVYSG-IRVSDNLPVAIKHVE---KDRISDWGELPNGTRVPMEVVLLKKVSSG 67
Query: 558 HKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
              ++RLL + +   + +L+ E          LF        L+ E+A      +     
Sbjct: 68  FSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 618 ECCT-QIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF 675
            C    ++H DIK +NIL+D +    ++ DFG   LL   +    T   GT+ Y  PEW 
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 181
Query: 676 RNMPITVK-VDVYSYGVLLLEIIC 698
           R      +   V+S G+LL +++C
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVC 205

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 24/217 (11%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIG- 554
           KE +E        LG G FG+VY G + +  +  VA+K +    +D   ++    NG   
Sbjct: 26  KEPLESQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVE---KDRISDWGELPNGTRV 81
Query: 555 ----------QTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI 604
                      +    ++RLL + +   + +L+ E          LF        L+ E+
Sbjct: 82  PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEEL 138
Query: 605 AMGIAGGLFYLHEECCT-QIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTA 662
           A      +      C    ++H DIK +NIL+D +    ++ DFG   LL   +    T 
Sbjct: 139 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD 195
Query: 663 IRGTKGYVAPEWFRNMPITVK-VDVYSYGVLLLEIIC 698
             GT+ Y  PEW R      +   V+S G+LL +++C
Sbjct: 196 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 232

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 20/198 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKL---NSVFQDSEKE-FKAEVNGIGQTHHKNLVRL 564
           LG+G F   ++  ++   +  V   K+   + + +  ++E    E++      H+++V  
Sbjct: 47  LGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 104
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASF-----LFGDSKPNWKLRTEIAMGIAGGLFYLHEEC 619
            G+ ++     +V E     ++           + +  + LR      I  G  YLH   
Sbjct: 105 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ-----IVLGCQYLHR-- 157
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP 679
             ++IH D+K  N+ L++    +I DFGLA  +  D       + GT  Y+APE      
Sbjct: 158 -NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD-GERKKVLCGTPNYIAPEVLSKKG 215
Query: 680 ITVKVDVYSYGVLLLEII 697
            + +VDV+S G ++  ++
Sbjct: 216 HSFEVDVWSIGCIMYTLL 233

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 20/198 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKL---NSVFQDSEKE-FKAEVNGIGQTHHKNLVRL 564
           LG+G F   ++  ++   +  V   K+   + + +  ++E    E++      H+++V  
Sbjct: 23  LGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 80
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASF-----LFGDSKPNWKLRTEIAMGIAGGLFYLHEEC 619
            G+ ++     +V E     ++           + +  + LR      I  G  YLH   
Sbjct: 81  HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ-----IVLGCQYLHR-- 133
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP 679
             ++IH D+K  N+ L++    +I DFGLA  +  D       + GT  Y+APE      
Sbjct: 134 -NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD-GERKKVLCGTPNYIAPEVLSKKG 191
Query: 680 ITVKVDVYSYGVLLLEII 697
            + +VDV+S G ++  ++
Sbjct: 192 HSFEVDVWSIGCIMYTLL 209

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 24/217 (11%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIG- 554
           KE +E        LG G FG+VY G + +  +  VA+K    V +D   ++    NG   
Sbjct: 31  KEPLESQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKH---VEKDRISDWGELPNGTRV 86
Query: 555 ----------QTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI 604
                      +    ++RLL + +   + +L+ E          LF        L+ E+
Sbjct: 87  PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEEL 143
Query: 605 AMGIAGGLFYLHEECCT-QIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTA 662
           A      +      C    ++H DIK +NIL+D +    ++ DFG   LL   +    T 
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD 200
Query: 663 IRGTKGYVAPEWFRNMPITVK-VDVYSYGVLLLEIIC 698
             GT+ Y  PEW R      +   V+S G+LL +++C
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 237

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 20/198 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKL---NSVFQDSEKE-FKAEVNGIGQTHHKNLVRL 564
           LG+G F   ++  ++   +  V   K+   + + +  ++E    E++      H+++V  
Sbjct: 49  LGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 106
Query: 565 LGYCDEGQNRLLVYEFMSNGTVASF-----LFGDSKPNWKLRTEIAMGIAGGLFYLHEEC 619
            G+ ++     +V E     ++           + +  + LR      I  G  YLH   
Sbjct: 107 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ-----IVLGCQYLHR-- 159
Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP 679
             ++IH D+K  N+ L++    +I DFGLA  +  D       + GT  Y+APE      
Sbjct: 160 -NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD-GERKKVLCGTPNYIAPEVLSKKG 217
Query: 680 ITVKVDVYSYGVLLLEII 697
            + +VDV+S G ++  ++
Sbjct: 218 HSFEVDVWSIGCIMYTLL 235

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 88/195 (45%), Gaps = 20/195 (10%)
Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           +++G G FG V +   +  ++  VAVK +    +  ++  K E+       H N+VR   
Sbjct: 25  KDIGAGNFG-VARLMRDKQANELVAVKYIER-GEKIDENVKREIINHRSLRHPNIVRFKE 82
Query: 567 YCDEGQNRLLVYEFMSNGTVASFL-----FGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
                 +  +V E+ S G +   +     F + +  +  +  I+     G+ Y H     
Sbjct: 83  VILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLIS-----GVSYAH---AM 134
Query: 622 QIIHCDIKPQNILLDDHYNAR--ISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP 679
           Q+ H D+K +N LLD     R  I+DFG +K   L  S   +A+ GT  Y+APE      
Sbjct: 135 QVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVL-HSQPKSAV-GTPAYIAPEVLLKKE 192
Query: 680 ITVKV-DVYSYGVLL 693
              KV DV+S GV L
Sbjct: 193 YDGKVADVWSCGVTL 207

>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 34/213 (15%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ-----DSEKEFKAEVNGIGQTHHKNLVR 563
           LG GAFG V +   +     HVAVK + +V +      SE +    +N          V+
Sbjct: 22  LGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQ 81
Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR--TEIAMGIAGGLFYLHEECCT 621
           +L + +   +  +V+E +   T   F+  +    ++L    ++A  I   + +LH     
Sbjct: 82  MLEWFEHHGHICIVFELLGLSTY-DFIKENGFLPFRLDHIRKMAYQICKSVNFLHS---N 137
Query: 622 QIIHCDIKPQNILL-----DDHYNARIS--------------DFGLAKLLTLDQSHTNTA 662
           ++ H D+KP+NIL       + YN +I               DFG A   T D  H +T 
Sbjct: 138 KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA---TYDDEHHSTL 194
Query: 663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLE 695
           +   + Y APE    +  +   DV+S G +L+E
Sbjct: 195 V-XXRHYRAPEVILALGWSQPCDVWSIGCILIE 226

>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki Length = 381

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 36/214 (16%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKN------LV 562
           LG G FG V +   +    + VA+K + +V +  E   + E+N + +   K+       V
Sbjct: 59  LGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAA-RLEINVLKKIKEKDKENKFLCV 117
Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR--TEIAMGIAGGLFYLHEECC 620
            +  + +   +  + +E +   T   FL  ++   + L     +A  +   L +LHE   
Sbjct: 118 LMSDWFNFHGHMCIAFELLGKNTF-EFLKENNFQPYPLPHVRHMAYQLCHALRFLHE--- 173
Query: 621 TQIIHCDIKPQNIL-----LDDHYNA--------------RISDFGLAKLLTLDQSHTNT 661
            Q+ H D+KP+NIL      +  YN               R++DFG A   T D  H +T
Sbjct: 174 NQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA---TFDHEH-HT 229
Query: 662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLE 695
            I  T+ Y  PE    +      DV+S G +L E
Sbjct: 230 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFE 263

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 24/217 (11%)
Query: 496 KELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIG- 554
           KE +E        LG G FG+VY G + +  +  VA+K    V +D   ++    NG   
Sbjct: 51  KEPLESQYQVGPLLGSGGFGSVYSG-IRVSDNLPVAIKH---VEKDRISDWGELPNGTRV 106
Query: 555 ----------QTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI 604
                      +    ++RLL + +   + +L+ E          LF        L+ E+
Sbjct: 107 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEEL 163
Query: 605 AMGIAGGLFYLHEECCT-QIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTA 662
           A      +      C    ++H DIK +NIL+D +    ++ DFG   LL   +    T 
Sbjct: 164 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTD 220
Query: 663 IRGTKGYVAPEWFRNMPITVK-VDVYSYGVLLLEIIC 698
             GT+ Y  PEW R      +   V+S G+LL +++C
Sbjct: 221 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 257

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 21/202 (10%)
Query: 510 GRGAFGTVYKGFVNMGSSNHVAVKKL--NSVFQDSEKEFKAEVNGIGQTHHKNLVRL--- 564
           G+G FGTV  G     +   VA+KK+  +  F++ E +    +  +   HH N+V+L   
Sbjct: 32  GQGTFGTVQLG-KEKSTGMSVAIKKVIQDPRFRNRELQI---MQDLAVLHHPNIVQLQSY 87
Query: 565 ---LGYCDEGQNRL-LVYEFMSNGT---VASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
              LG  D     L +V E++ +       ++      P   L       +   +  LH 
Sbjct: 88  FYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHL 147
Query: 618 ECCTQIIHCDIKPQNILLDDHYNA-RISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEW-F 675
                + H DIKP N+L+++     ++ DFG AK   L  S  N A   ++ Y APE  F
Sbjct: 148 PS-VNVCHRDIKPHNVLVNEADGTLKLCDFGSAK--KLSPSEPNVAYICSRYYRAPELIF 204
Query: 676 RNMPITVKVDVYSYGVLLLEII 697
            N   T  VD++S G +  E++
Sbjct: 205 GNQHYTTAVDIWSVGCIFAEMM 226

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 89/201 (44%), Gaps = 21/201 (10%)
Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH-HKNLVRLLGY 567
           LG GA   V +  +N+ +S   AVK +             EV  + Q   H+N++ L+ +
Sbjct: 21  LGEGAHARV-QTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCD 627
            +E     LV+E M  G++ S +      N    + +   +A  L +LH +    I H D
Sbjct: 80  FEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNK---GIAHRD 136
Query: 628 IKPQNILLDDHYN----ARISDFGLAKLLTLDQSHTNTAIR------GTKGYVAPEWFRN 677
           +KP+NIL  +H N     +I DFGL   + L+   +  +        G+  Y+APE    
Sbjct: 137 LKPENILC-EHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEA 195
Query: 678 MPITVKV-----DVYSYGVLL 693
                 +     D++S GV+L
Sbjct: 196 FSEEASIYDKRCDLWSLGVIL 216

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 575 LLVYEFMSNGTVASFL--FGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQN 632
           L+V E +  G + S +   GD     +  +EI   I   + YLH      I H D+KP+N
Sbjct: 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 191
Query: 633 ILLDDHY-NA--RISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSY 689
           +L      NA  +++DFG AK  T   S T      T  YVAPE           D++S 
Sbjct: 192 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSL 249
Query: 690 GVLLLEIIC 698
           GV++  ++C
Sbjct: 250 GVIMYILLC 258

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 575 LLVYEFMSNGTVASFL--FGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQN 632
           L+V E +  G + S +   GD     +  +EI   I   + YLH      I H D+KP+N
Sbjct: 105 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 161
Query: 633 ILLDDHY-NA--RISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSY 689
           +L      NA  +++DFG AK  T   S T      T  YVAPE           D++S 
Sbjct: 162 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSL 219
Query: 690 GVLLLEIIC 698
           GV++  ++C
Sbjct: 220 GVIMYILLC 228

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 575 LLVYEFMSNGTVASFL--FGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQN 632
           L+V E +  G + S +   GD     +  +EI   I   + YLH      I H D+KP+N
Sbjct: 97  LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPEN 153
Query: 633 ILLDDHY-NA--RISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSY 689
           +L      NA  +++DFG AK  T   S T      T  YVAPE           D++S 
Sbjct: 154 LLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY--TPYYVAPEVLGPEKYDKSCDMWSL 211
Query: 690 GVLLLEIIC 698
           GV++  ++C
Sbjct: 212 GVIMYILLC 220
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	792
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-127
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-116
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-114
3soc_A	322	Activin receptor type-2A; structural genomics cons	2e-68
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	6e-59
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	6e-58
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-55
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-55
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-54
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-54
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-53
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-53
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	2e-52
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-50
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-47
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	1e-46
3q4u_A	301	Activin receptor type-1; structural genomics conso	3e-46
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	2e-44
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-40
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	9e-39
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	7e-38
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	9e-38
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	2e-37
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	2e-37
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	3e-37
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	4e-37
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	4e-37
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	9e-37
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	1e-36
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	2e-36
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	2e-36
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	2e-36
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-36
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	4e-36
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	5e-36
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	6e-36
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	7e-36
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	7e-36
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	1e-35
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	1e-35
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	1e-35
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	1e-35
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	3e-35
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	3e-35
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	3e-35
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	3e-35
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	4e-35
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	5e-35
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	9e-35
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	9e-35
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	1e-34
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-34
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	3e-34
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	4e-34
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	4e-34
4aoj_A	329	High affinity nerve growth factor receptor; transf	4e-34
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	8e-34
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-33
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	1e-33
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-33
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-33
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	6e-33
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	6e-33
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	1e-32
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	1e-32
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	3e-32
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	4e-32
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	5e-32
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	6e-32
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	9e-32
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	9e-32
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	1e-31
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	1e-31
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	1e-31
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	3e-31
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	7e-31
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	7e-31
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	9e-31
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	1e-30
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	1e-30
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	1e-30
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	2e-30
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-30
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	3e-30
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	6e-30
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	1e-29
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	4e-29
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	4e-29
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	4e-29
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	5e-29
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	6e-29
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	2e-28
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	3e-28
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	4e-28
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	5e-28
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	6e-28
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	7e-28
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	8e-28
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-27
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-27
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	2e-27
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	3e-27
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	3e-27
3bhy_A	283	Death-associated protein kinase 3; death associate	3e-27
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	3e-27
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	3e-27
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	4e-27
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	5e-27
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	5e-27
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	5e-27
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	5e-27
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	8e-27
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	9e-27
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	1e-26
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-26
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	3e-26
3ork_A	311	Serine/threonine protein kinase; structural genomi	3e-26
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	4e-26
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	7e-26
3aln_A	327	Dual specificity mitogen-activated protein kinase;	7e-26
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	8e-26
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-25
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-25
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	1e-25
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-25
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	2e-25
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-25
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-25
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-25
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-25
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	3e-25
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	3e-25
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	4e-25
3fme_A	290	Dual specificity mitogen-activated protein kinase;	5e-25
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	5e-25
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	6e-25
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	9e-25
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-24
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	1e-24
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	1e-24
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	1e-24
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	2e-24
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	3e-24
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	6e-24
3an0_A	340	Dual specificity mitogen-activated protein kinase;	1e-23
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	2e-23
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	3e-23
2dyl_A	318	Dual specificity mitogen-activated protein kinase	3e-23
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	9e-23
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	1e-22
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	2e-22
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	2e-22
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	1e-21
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	2e-21
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	2e-21
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	4e-20
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	7e-20
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	8e-20
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	2e-19
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	3e-19
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	4e-19
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	4e-19
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	6e-19
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	6e-19
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	6e-19
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	8e-19
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	1e-18
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	1e-18
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	2e-18
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	2e-18
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	5e-18
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	8e-18
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	1e-17
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	2e-17
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	3e-17
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	4e-17
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	5e-17
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	6e-17
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	1e-16
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	1e-16
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	1e-16
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	1e-16
3o0g_A	292	Cell division protein kinase 5; kinase activator c	2e-16
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-16
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	2e-16
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	2e-16
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	2e-16
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	4e-16
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	4e-16
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	5e-16
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	7e-16
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	1e-15
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	1e-15
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	1e-15
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	2e-15
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	2e-15
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	2e-15
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	3e-15
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	3e-15
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	3e-15
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	3e-15
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	3e-15
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	4e-15
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	7e-15
3uqc_A	286	Probable conserved transmembrane protein; structur	9e-15
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	1e-14
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	2e-14
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	2e-14
3niz_A	311	Rhodanese family protein; structural genomics, str	2e-14
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	2e-14
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-14
3rp9_A	458	Mitogen-activated protein kinase; structural genom	2e-14
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	3e-14
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	4e-14
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	5e-14
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	6e-14
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	9e-14
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	1e-13
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	1e-13
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	1e-13
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	1e-13
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	5e-13
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	7e-13
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	2e-11
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	2e-11
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	6e-04
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	2e-11
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	7e-11
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	2e-10
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	6e-10
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	2e-09
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	2e-09
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	2e-09
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	3e-09
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	3e-04
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	8e-09
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	3e-08
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	1e-07
1kj1_A	109	Lectin I, lecgna 1; BULB lectin, mannose, plant pr	3e-07
1kj1_A	109	Lectin I, lecgna 1; BULB lectin, mannose, plant pr	1e-06
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	9e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	2e-06
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	2e-06
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	7e-04
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	1e-05
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	4e-05
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	3e-04
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	4e-05
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	5e-05
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	3e-04
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	5e-05
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	1e-04
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	1e-04
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	2e-04
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	3e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  381 bits (981), Expect = e-127
 Identities = 127/306 (41%), Positives = 176/306 (57%), Gaps = 10/306 (3%)

Query: 478 PHQEDQGVSYMNLRCFTYKELVEVTRGFKEE--LGRGAFGTVYKGFVNMGSSNHVAVKKL 535
           P +ED  V    L+ F+ +EL   +  F  +  LGRG FG VYKG +  G+   VAVK+L
Sbjct: 5   PAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGT--LVAVKRL 62

Query: 536 NS-VFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDS 594
                Q  E +F+ EV  I    H+NL+RL G+C     RLLVY +M+NG+VAS L    
Sbjct: 63  KEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP 122

Query: 595 KP----NWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK 650
           +     +W  R  IA+G A GL YLH+ C  +IIH D+K  NILLD+ + A + DFGLAK
Sbjct: 123 ESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 182

Query: 651 LLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNID-NEISK 709
           L+    +H  TA+RGT G++APE+      + K DV+ YGV+LLE+I  +R  D   ++ 
Sbjct: 183 LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAN 242

Query: 710 VDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKV 769
            D  +L DW     +E+ LEALV+ DL+       + + + VA  C Q  P  RP M +V
Sbjct: 243 DDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV 302

Query: 770 TQMLEG 775
            +MLEG
Sbjct: 303 VRMLEG 308

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  353 bits (907), Expect = e-116
 Identities = 103/298 (34%), Positives = 159/298 (53%), Gaps = 13/298 (4%)

Query: 489 NLRCFTYKELVEVTRGFKEE--LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEF 546
                   +L E T  F  +  +G G FG VYKG +  G+   VA+K+         +EF
Sbjct: 25  ESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAK--VALKRRTPESSQGIEEF 82

Query: 547 KAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP----NWKLRT 602
           + E+  +    H +LV L+G+CDE    +L+Y++M NG +   L+G   P    +W+ R 
Sbjct: 83  ETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRL 142

Query: 603 EIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKL-LTLDQSHTNT 661
           EI +G A GL YLH      IIH D+K  NILLD+++  +I+DFG++K    LDQ+H +T
Sbjct: 143 EICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLST 199

Query: 662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYD 721
            ++GT GY+ PE+F    +T K DVYS+GV+L E++C R  I   + + +   L +WA +
Sbjct: 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR-EMVNLAEWAVE 258

Query: 722 RYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEV 779
            +    LE +V+ +L        L +F   A  C+      RP+M  V   LE  + +
Sbjct: 259 SHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  348 bits (896), Expect = e-114
 Identities = 108/315 (34%), Positives = 165/315 (52%), Gaps = 28/315 (8%)

Query: 480 QEDQGVSYMNLRCFTYKELVEVTRGFKEE--------LGRGAFGTVYKGFVNMGSSNHVA 531
            +   VS      F++ EL  VT  F E         +G G FG VYKG+VN   +  VA
Sbjct: 2   NKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN---NTTVA 58

Query: 532 VKKLNSVFQDS----EKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVA 587
           VKKL ++   +    +++F  E+  + +  H+NLV LLG+  +G +  LVY +M NG++ 
Sbjct: 59  VKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLL 118

Query: 588 SFLFGDSKP---NWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARIS 644
             L         +W +R +IA G A G+ +LHE      IH DIK  NILLD+ + A+IS
Sbjct: 119 DRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILLDEAFTAKIS 175

Query: 645 DFGLAKLL-TLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNI 703
           DFGLA+      Q+   + I GT  Y+APE  R   IT K D+YS+GV+LLEII     +
Sbjct: 176 DFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEIITGLPAV 234

Query: 704 DNEISKVDKAILTDWAYDRYQE-RTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSH 762
           D      +  +L D   +   E +T+E  ++  +   ++ ++      VA  C+ E  + 
Sbjct: 235 D---EHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSV-EAMYSVASQCLHEKKNK 290

Query: 763 RPTMRKVTQMLEGVV 777
           RP ++KV Q+L+ + 
Sbjct: 291 RPDIKKVQQLLQEMT 305

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score =  228 bits (582), Expect = 2e-68
 Identities = 69/324 (21%), Positives = 123/324 (37%), Gaps = 35/324 (10%)

Query: 476 MRPHQEDQGVSYMNLRCFTYKELVEVTRGFK--EELGRGAFGTVYKGFVNMGSSNHVAVK 533
           M  H         +      + L   +   +  E   RG FG V+K  +    + +VAVK
Sbjct: 1   MGHHHHHH----SSGVDLGTENLYFQSMPLQLLEVKARGRFGCVWKAQLL---NEYVAVK 53

Query: 534 KLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQN----RLLVYEFMSNGTVASF 589
                      + + EV  +    H+N+++ +G    G +      L+  F   G+++ F
Sbjct: 54  IFPIQ-DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDF 112

Query: 590 LFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ-------IIHCDIKPQNILLDDHYNAR 642
           L   +  +W     IA  +A GL YLHE+           I H DIK +N+LL ++  A 
Sbjct: 113 LKA-NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC 171

Query: 643 ISDFGLAKLLTLDQSHTNT-AIRGTKGYVAPEWFR-----NMPITVKVDVYSYGVLLLEI 696
           I+DFGLA      +S  +T    GT+ Y+APE             +++D+Y+ G++L E+
Sbjct: 172 IADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231

Query: 697 ICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL------EAMNNVTMLHRFVM 750
                  D  + +       +          ++ +V +        +       +     
Sbjct: 232 ASRCTAADGPVDE-YMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCE 290

Query: 751 VAFWCIQEDPSHRPTMRKVTQMLE 774
               C   D   R +   V + + 
Sbjct: 291 TIEECWDHDAEARLSAGCVGERIT 314

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  201 bits (514), Expect = 6e-59
 Identities = 76/287 (26%), Positives = 139/287 (48%), Gaps = 32/287 (11%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLV 562
            KE++G G+FGTV++   +    + VAVK L       +   EF  EV  + +  H N+V
Sbjct: 41  IKEKIGAGSFGTVHRAEWH---GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97

Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFL---FGDSKPNWKLRTEIAMGIAGGLFYLHEEC 619
             +G   +  N  +V E++S G++   L       + + + R  +A  +A G+ YLH   
Sbjct: 98  LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN-R 156

Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP 679
              I+H ++K  N+L+D  Y  ++ DFGL++L       ++ +  GT  ++APE  R+ P
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA-STFLSSKSAAGTPEWMAPEVLRDEP 215

Query: 680 ITVKVDVYSYGVLLLEIICLR---RNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL 736
              K DVYS+GV+L E+  L+    N++   ++V  A+        ++ + LE +  N  
Sbjct: 216 SNEKSDVYSFGVILWELATLQQPWGNLNP--AQVVAAVG-------FKCKRLE-IPRNLN 265

Query: 737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPIPP 783
             +         ++    C   +P  RP+   +  +L  +++  +PP
Sbjct: 266 PQV-------AAIIEG--CWTNEPWKRPSFATIMDLLRPLIKSAVPP 303

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  199 bits (507), Expect = 6e-58
 Identities = 76/287 (26%), Positives = 124/287 (43%), Gaps = 41/287 (14%)

Query: 495 YKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIG 554
           YKE+       +E +GRGAFG V K       +  VA+K++ S  +   K F  E+  + 
Sbjct: 7   YKEIE-----VEEVVGRGAFGVVCKAKWR---AKDVAIKQIES--ESERKAFIVELRQLS 56

Query: 555 QTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP---NWKLRTEIAMGIAGG 611
           + +H N+V+L G C       LV E+   G++ + L G                +  + G
Sbjct: 57  RVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQG 114

Query: 612 LFYLHEECCTQIIHCDIKPQNILLDDHYN-ARISDFGLAKLLTLDQSHTNTAIRGTKGYV 670
           + YLH      +IH D+KP N+LL       +I DFG A     D     T  +G+  ++
Sbjct: 115 VAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC----DIQTHMTNNKGSAAWM 170

Query: 671 APEWFRNMPITVKVDVYSYGVLLLEIICLR---RNIDNEISKVDKAILTDWAYDRYQERT 727
           APE F     + K DV+S+G++L E+I  R     I     ++  A+           R 
Sbjct: 171 APEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNG-------TR- 222

Query: 728 LEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
                      + N+      +M    C  +DPS RP+M ++ +++ 
Sbjct: 223 --------PPLIKNLPKPIESLMTR--CWSKDPSQRPSMEEIVKIMT 259

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  192 bits (489), Expect = 1e-55
 Identities = 75/281 (26%), Positives = 127/281 (45%), Gaps = 35/281 (12%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN--SVFQDSEKEFKAEVNGIGQTHHKNLV 562
             + +G G+FGTVYKG  +      VAVK LN  +      + FK EV  + +T H N++
Sbjct: 28  VGQRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83

Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFL-FGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
             +GY        +V ++    ++   L   ++K   K   +IA   A G+ YLH +   
Sbjct: 84  LFMGYSTA-PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK--- 139

Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ-SHTNTAIRGTKGYVAPEWFRN--- 677
            IIH D+K  NI L +    +I DFGLA   +    SH    + G+  ++APE  R    
Sbjct: 140 SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 199

Query: 678 MPITVKVDVYSYGVLLLEIICLR---RNIDNEISKVDKAILTDWAYDRYQERTLEALVEN 734
            P + + DVY++G++L E++  +    NI+N     D+ I       R       + V +
Sbjct: 200 NPYSFQSDVYAFGIVLYELMTGQLPYSNINN----RDQII---EMVGRGSLSPDLSKVRS 252

Query: 735 DL-EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
           +  + M  +            C+++    RP+  ++   +E
Sbjct: 253 NCPKRMKRLMA---------ECLKKKRDERPSFPRILAEIE 284

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  192 bits (489), Expect = 2e-55
 Identities = 68/288 (23%), Positives = 115/288 (39%), Gaps = 41/288 (14%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
             E LG+G FG   K      +   + +K+L    +++++ F  EV  +    H N+++ 
Sbjct: 14  HGEVLGKGCFGQAIKVTHR-ETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKF 72

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP-NWKLRTEIAMGIAGGLFYLHEECCTQI 623
           +G   + +    + E++  GT+   +        W  R   A  IA G+ YLH      I
Sbjct: 73  IGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NI 129

Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN-------------TAIRGTKGYV 670
           IH D+   N L+ ++ N  ++DFGLA+L+  +++                  + G   ++
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189

Query: 671 APEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEA 730
           APE         KVDV+S+G++L EII                     A   Y  RT++ 
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEIIGRVN-----------------ADPDYLPRTMDF 232

Query: 731 LVEND----LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
            +            N      F  +   C   DP  RP+  K+   LE
Sbjct: 233 GLNVRGFLDRYCPPNC--PPSFFPITVRCCDLDPEKRPSFVKLEHWLE 278

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  189 bits (482), Expect = 2e-54
 Identities = 65/289 (22%), Positives = 112/289 (38%), Gaps = 46/289 (15%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN--SVFQDSEKEFKAEVNGIGQTHHKNLV 562
             E +G+G FG VY G  +      VA++ ++     +D  K FK EV    QT H+N+V
Sbjct: 37  IGELIGKGRFGQVYHGRWH----GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVV 92

Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
             +G C    +  ++       T+ S +       +     +IA  I  G+ YLH +   
Sbjct: 93  LFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK--- 149

Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTL----DQSHTNTAIRGTKGYVAPEWFRN 677
            I+H D+K +N+  D+     I+DFGL  +  +     +        G   ++APE  R 
Sbjct: 150 GILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQ 208

Query: 678 M---------PITVKVDVYSYGVLLLEIICLR---RNIDNEISKVDKAILTDWAYDRYQE 725
           +         P +   DV++ G +  E+       +    E      AI           
Sbjct: 209 LSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE------AI----------- 251

Query: 726 RTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
             +  +       ++ + M      +  +C   +   RPT  K+  MLE
Sbjct: 252 --IWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLE 298

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  186 bits (474), Expect = 1e-53
 Identities = 75/287 (26%), Positives = 110/287 (38%), Gaps = 45/287 (15%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD----SEKEFKAEVNGIGQTHHKN 560
            +E +G G FG VY+ F      + VAVK       +    + +  + E        H N
Sbjct: 11  LEEIIGIGGFGKVYRAFWI---GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPN 67

Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECC 620
           ++ L G C +  N  LV EF   G +   L G  +    +    A+ IA G+ YLH+E  
Sbjct: 68  IIALRGVCLKEPNLCLVMEFARGGPLNRVLSG-KRIPPDILVNWAVQIARGMNYLHDEAI 126

Query: 621 TQIIHCDIKPQNILLD--------DHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAP 672
             IIH D+K  NIL+          +   +I+DFGLA+        T  +  G   ++AP
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW---HRTTKMSAAGAYAWMAP 183

Query: 673 EWFRNMPITVKVDVYSYGVLLLEIICLR---RNIDNEISKVDKAILTDWAYDRYQERTLE 729
           E  R    +   DV+SYGVLL E++      R ID                         
Sbjct: 184 EVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDG-------------------LAVAY 224

Query: 730 ALVEND--LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
            +  N   L   +        +M    C   DP  RP+   +   L 
Sbjct: 225 GVAMNKLALPIPSTCPEPFAKLMED--CWNPDPHSRPSFTNILDQLT 269

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score =  188 bits (478), Expect = 1e-53
 Identities = 68/308 (22%), Positives = 111/308 (36%), Gaps = 48/308 (15%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT---HHKNL 561
             E +GRG +G VYKG ++      VAVK  +     + + F  E N I +     H N+
Sbjct: 17  LLELIGRGRYGAVYKGSLD---ERPVAVKVFSF---ANRQNFINEKN-IYRVPLMEHDNI 69

Query: 562 VRLLGYCDEG-----QNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLH 616
            R +   +          LLV E+  NG++  +L      +W     +A  +  GL YLH
Sbjct: 70  ARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLS-LHTSDWVSSCRLAHSVTRGLAYLH 128

Query: 617 EECCT------QIIHCDIKPQNILLDDHYNARISDFGLAKLL-------TLDQSHTNTAI 663
            E          I H D+  +N+L+ +     ISDFGL+  L         ++ +   + 
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE 188

Query: 664 RGTKGYVAPEWFRN-------MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILT 716
            GT  Y+APE                +VD+Y+ G++  EI    R  D    +       
Sbjct: 189 VGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI--FMRCTDLFPGESVPEYQM 246

Query: 717 DWAYDRYQERTLEAL----VENDL------EAMNNVTMLHRFVMVAFWCIQEDPSHRPTM 766
            +  +     T E +                   N   +         C  +D   R T 
Sbjct: 247 AFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTA 306

Query: 767 RKVTQMLE 774
           +   + + 
Sbjct: 307 QXAEERMA 314

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  183 bits (466), Expect = 2e-52
 Identities = 69/296 (23%), Positives = 119/296 (40%), Gaps = 44/296 (14%)

Query: 495 YKELVEVTRGFKEELGRGAFGTVYKG-FVNMGSSNHVAVKKL-------NSVFQDSEKEF 546
             E+      +++++G+G FG V+KG  V   S   VA+K L        +   +  +EF
Sbjct: 18  DNEIE-----YEKQIGKGGFGLVHKGRLVKDKSV--VAIKSLILGDSEGETEMIEKFQEF 70

Query: 547 KAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP-NWKLRTEIA 605
           + EV  +   +H N+V+L G         +V EF+  G +   L   + P  W ++  + 
Sbjct: 71  QREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLM 128

Query: 606 MGIAGGLFYLHEECCTQIIHCDIKPQNILLD-----DHYNARISDFGLAKLLTLDQSHTN 660
           + IA G+ Y+       I+H D++  NI L          A+++DFGL++       H+ 
Sbjct: 129 LDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSV 183

Query: 661 TAIRGTKGYVAPEWF--RNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW 718
           + + G   ++APE         T K D YS+ ++L  I+      D              
Sbjct: 184 SGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE------------- 230

Query: 719 AYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
            Y   + + +  + E  L          R   V   C   DP  RP    + + L 
Sbjct: 231 -YSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  177 bits (450), Expect = 2e-50
 Identities = 54/291 (18%), Positives = 106/291 (36%), Gaps = 59/291 (20%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN--SVFQDSEKEFKAEVNGIGQTHHKNLV 562
           F  +L     G ++KG       N + VK L          ++F  E   +    H N++
Sbjct: 14  FLTKLNENHSGELWKGRWQ---GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVL 70

Query: 563 RLLGYCDE--GQNRLLVYEFMSNGTVASFLFGDSKP--NWKLRTEIAMGIAGGLFYLHEE 618
            +LG C      +  L+  +M  G++ + L   +    +     + A+ +A G+ +LH  
Sbjct: 71  PVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT- 129

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               I    +  +++++D+   ARIS   +        S  +        +VAPE  +  
Sbjct: 130 LEPLIPRHALNSRSVMIDEDMTARISMADVKF------SFQSPGRMYAPAWVAPEALQKK 183

Query: 679 P---ITVKVDVYSYGVLLLEIICLR---RNIDNEISKVDKAILTDWAYDRYQER------ 726
           P        D++S+ VLL E++       ++ N   ++   +  +        R      
Sbjct: 184 PEDTNRRSADMWSFAVLLWELVTREVPFADLSN--MEIGMKVALE------GLRPTIPPG 235

Query: 727 ---TLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
               +  L++                     C+ EDP+ RP    +  +LE
Sbjct: 236 ISPHVSKLMKI--------------------CMNEDPAKRPKFDMIVPILE 266

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score =  170 bits (433), Expect = 2e-47
 Identities = 64/294 (21%), Positives = 119/294 (40%), Gaps = 31/294 (10%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
             +++G+G +G V+ G         VAVK   +  +++    + E+       H+N++  
Sbjct: 41  MVKQIGKGRYGEVWMGKWR---GEKVAVKVFFTT-EEASWFRETEIYQTVLMRHENILGF 96

Query: 565 LGYCDEGQNR----LLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECC 620
           +    +G        L+ ++  NG++  +L   +  + K   ++A     GL +LH E  
Sbjct: 97  IAADIKGTGSWTQLYLITDYHENGSLYDYL-KSTTLDAKSMLKLAYSSVSGLCHLHTEIF 155

Query: 621 TQ-----IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT---NTAIRGTKGYVAP 672
           +      I H D+K +NIL+  +    I+D GLA     D +          GTK Y+ P
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP 215

Query: 673 E------WFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWA-YDRYQE 725
           E         +    +  D+YS+G++L E+   RR +   I +  +    D    D   E
Sbjct: 216 EVLDESLNRNHFQSYIMADMYSFGLILWEV--ARRCVSGGIVEEYQLPYHDLVPSDPSYE 273

Query: 726 RTLEALVENDL-----EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
              E +    L        ++   L +   +   C   +P+ R T  +V + L 
Sbjct: 274 DMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLA 327

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score =  166 bits (422), Expect = 3e-46
 Identities = 69/297 (23%), Positives = 123/297 (41%), Gaps = 37/297 (12%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT---HHKNL 561
             E +G+G +G V++G        +VAVK  +S  +D EK +  E   +  T    H+N+
Sbjct: 12  LLECVGKGRYGEVWRGSWQ---GENVAVKIFSS--RD-EKSWFRETE-LYNTVMLRHENI 64

Query: 562 VRLLGYCDEGQNR----LLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           +  +      ++      L+  +   G++  +L   +  +      I + IA GL +LH 
Sbjct: 65  LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL-QLTTLDTVSCLRIVLSIASGLAHLHI 123

Query: 618 ECCTQ-----IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH---TNTAIRGTKGY 669
           E         I H D+K +NIL+  +    I+D GLA + +   +     N    GTK Y
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 183

Query: 670 VAPEWFRNMPITV------KVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAY-DR 722
           +APE               +VD++++G++L E+   RR + N I +  K    D    D 
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARRMVSNGIVEDYKPPFYDVVPNDP 241

Query: 723 YQERTLEALVENDL-----EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
             E   + +  +           +   L     +   C  ++PS R T  ++ + L 
Sbjct: 242 SFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLT 298

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score =  162 bits (411), Expect = 2e-44
 Identities = 63/294 (21%), Positives = 114/294 (38%), Gaps = 31/294 (10%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            +E +G+G FG V++G         VAVK  +S  ++     +AE+       H+N++  
Sbjct: 46  LQESIGKGRFGEVWRGKWR---GEEVAVKIFSSR-EERSWFREAEIYQTVMLRHENILGF 101

Query: 565 LGYCDEGQNR----LLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECC 620
           +   ++         LV ++  +G++  +L        +   ++A+  A GL +LH E  
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALSTASGLAHLHMEIV 160

Query: 621 TQ-----IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT---NTAIRGTKGYVAP 672
                  I H D+K +NIL+  +    I+D GLA                  GTK Y+AP
Sbjct: 161 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 220

Query: 673 E------WFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQER 726
           E        ++     + D+Y+ G++  EI   RR     I +  +    D         
Sbjct: 221 EVLDDSINMKHFESFKRADIYAMGLVFWEI--ARRCSIGGIHEDYQLPYYDLVPSDPSVE 278

Query: 727 TLEALV-ENDL-----EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
            +  +V E  L         +   L     +   C   + + R T  ++ + L 
Sbjct: 279 EMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 332

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score =  152 bits (385), Expect = 2e-40
 Identities = 70/290 (24%), Positives = 115/290 (39%), Gaps = 45/290 (15%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLVR 563
             E++GRG FG V+ G +    +  VAVK          K +F  E   + Q  H N+VR
Sbjct: 118 LGEQIGRGNFGEVFSGRLR-ADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVR 176

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           L+G C + Q   +V E +  G   +FL    ++   K   ++    A G+ YL  +CC  
Sbjct: 177 LIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCC-- 234

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGY----VAPEWFRNM 678
            IH D+  +N L+ +    +ISDFG+++           A  G +       APE     
Sbjct: 235 -IHRDLAARNCLVTEKNVLKISDFGMSREEADGVY---AASGGLRQVPVKWTAPEALNYG 290

Query: 679 PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDR--YQERTLE---ALVE 733
             + + DV+S+G+LL E                      ++     Y   + +     VE
Sbjct: 291 RYSSESDVWSFGILLWET---------------------FSLGASPYPNLSNQQTREFVE 329

Query: 734 ND--LEAMNNV-TMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
               L         + R +M   W    +P  RP+   + Q L+ + +  
Sbjct: 330 KGGRLPCPELCPDAVFR-LMEQCW--AYEPGQRPSFSTIYQELQSIRKRH 376

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score =  149 bits (379), Expect = 9e-39
 Identities = 75/282 (26%), Positives = 125/282 (44%), Gaps = 43/282 (15%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            K +LG G +G VY+G      S  VAVK L     + E EF  E   + +  H NLV+L
Sbjct: 224 MKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 281

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYLHEECCTQ 622
           LG C       ++ EFM+ G +  +L   ++          +A  I+  + YL ++    
Sbjct: 282 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF-- 339

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ----SHTNTAIRGTKGYVAPEWFRNM 678
            IH ++  +N L+ +++  +++DFGL++L+T D     +     I+ T    APE     
Sbjct: 340 -IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT----APESLAYN 394

Query: 679 PITVKVDVYSYGVLLLEIICLRR----NIDNEISKVDKAILTDWAYDRYQERTLEALVEN 734
             ++K DV+++GVLL EI          ID                     +  E L ++
Sbjct: 395 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-------------------SQVYELLEKD 435

Query: 735 D-LEAMNNV-TMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
             +E        ++  +M A W  Q +PS RP+  ++ Q  E
Sbjct: 436 YRMERPEGCPEKVYE-LMRACW--QWNPSDRPSFAEIHQAFE 474

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  142 bits (359), Expect = 7e-38
 Identities = 65/271 (23%), Positives = 109/271 (40%), Gaps = 34/271 (12%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVK--KLNSVFQDSEKEFKAEVNGIGQTHHKNLV 562
           F  E+GRG+F TVYKG  +  ++  VA    +   + +   + FK E   +    H N+V
Sbjct: 30  FDIEIGRGSFKTVYKGL-DTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIV 88

Query: 563 RLLGYC---DEGQNRLLVY-EFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
           R         +G+  +++  E M++GT+ ++L        K+       I  GL +LH  
Sbjct: 89  RFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLH-T 147

Query: 619 CCTQIIHCDIKPQNILLDDHY-NARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
               IIH D+K  NI +     + +I D GLA L     +     + GT  ++APE +  
Sbjct: 148 RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKA---VIGTPEFMAPEMYEE 204

Query: 678 MPITVKVDVYSYGVLLLEIICLRR---NIDNEISKVDKAILTDWAYDRYQERTLEALVEN 734
                 VDVY++G+ +LE+           N        I     Y R       A  + 
Sbjct: 205 -KYDESVDVYAFGMCMLEMATSEYPYSECQNA-----AQI-----YRRVTSGVKPASFDK 253

Query: 735 DLEAMNNVTMLHRFVMVAFWCIQEDPSHRPT 765
                     +   +     CI+++   R +
Sbjct: 254 VAIP-----EVKEIIE---GCIRQNKDERYS 276

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score =  143 bits (362), Expect = 9e-38
 Identities = 71/288 (24%), Positives = 121/288 (42%), Gaps = 33/288 (11%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH---VAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           +  +LG+G FG+V     +    N    VAVK+L     D +++F+ E+  +   H   +
Sbjct: 27  YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFI 86

Query: 562 VRLLGYC--DEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYLHE 617
           V+  G       Q+  LV E++ +G +  FL    +           +  I  G+ YL  
Sbjct: 87  VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL-QRHRARLDASRLLLYSSQICKGMEYLGS 145

Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV---APEW 674
             C   +H D+  +NIL++   + +I+DFGLAKLL LD+ +        +  +   APE 
Sbjct: 146 RRC---VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYY-VVREPGQSPIFWYAPES 201

Query: 675 FRNMPITVKVDVYSYGVLLLEII------CLRRNIDNEISKVDKAILTDWAYDRYQERTL 728
             +   + + DV+S+GV+L E+       C        +   ++ +           R L
Sbjct: 202 LSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPAL-------SRLL 254

Query: 729 EALVEND-LEAMNNVTM-LHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
           E L E   L A       +H  +M   W     P  RP+   +   L+
Sbjct: 255 ELLEEGQRLPAPPACPAEVHE-LMKLCW--APSPQDRPSFSALGPQLD 299

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score =  142 bits (360), Expect = 2e-37
 Identities = 71/292 (24%), Positives = 115/292 (39%), Gaps = 46/292 (15%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSN---HVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKN 560
             + LG GAFGTVYKG            VA+K+L          E   E   +    + +
Sbjct: 19  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPH 78

Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--GIAGGLFYLHEE 618
           + RLLG C       L+ + M  G +  ++  + K N   +  +     IA G+ YL + 
Sbjct: 79  VCRLLGIC-LTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYLEDR 136

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV---APEWF 675
                +H D+  +N+L+    + +I+DFGLAKLL  ++   +    G K  +   A E  
Sbjct: 137 RL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALESI 191

Query: 676 RNMPITVKVDVYSYGVLLLEIICLRR----NIDNE--ISKVDKAILTDWAYDRYQERTLE 729
            +   T + DV+SYGV + E++         I      S ++K            ER   
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG-----------ER--- 237

Query: 730 ALVENDLEAMNNVTM-LHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
                 L      T+ ++  +M   W    D   RP  R++      +   P
Sbjct: 238 ------LPQPPICTIDVYM-IMRKCW--MIDADSRPKFRELIIEFSKMARDP 280

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score =  140 bits (356), Expect = 2e-37
 Identities = 67/283 (23%), Positives = 124/283 (43%), Gaps = 22/283 (7%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH---VAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F ++LG+G FG+V     +    N    VAVKKL    ++  ++F+ E+  +    H N+
Sbjct: 14  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73

Query: 562 VRLLGYC--DEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYLHE 617
           V+  G C     +N  L+ E++  G++  +L    K         +    I  G+ YL  
Sbjct: 74  VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGT 132

Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV---APEW 674
           +     IH D+  +NIL+++    +I DFGL K+L  D+          +  +   APE 
Sbjct: 133 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFF-KVKEPGESPIFWYAPES 188

Query: 675 FRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEN 734
                 +V  DV+S+GV+L E+        +  ++  + I  D    +     L  L++N
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND-KQGQMIVFHLIELLKN 247

Query: 735 D--LEAMNNVTM-LHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
           +  L   +     ++  +M   W    + + RP+ R +   ++
Sbjct: 248 NGRLPRPDGCPDEIYM-IMTECW--NNNVNQRPSFRDLALRVD 287

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score =  141 bits (357), Expect = 3e-37
 Identities = 67/283 (23%), Positives = 125/283 (44%), Gaps = 22/283 (7%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH---VAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
           F ++LG+G FG+V     +    N    VAVKKL    ++  ++F+ E+  +    H N+
Sbjct: 45  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 104

Query: 562 VRLLGYC--DEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYLHE 617
           V+  G C     +N  L+ E++  G++  +L    K         +    I  G+ YL  
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYLGT 163

Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV---APEW 674
           +     IH D+  +NIL+++    +I DFGL K+L  D+ +        +  +   APE 
Sbjct: 164 KRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYY-KVKEPGESPIFWYAPES 219

Query: 675 FRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEN 734
                 +V  DV+S+GV+L E+        +  ++  + I  D    +     L  L++N
Sbjct: 220 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND-KQGQMIVFHLIELLKN 278

Query: 735 D--LEAMNNVTM-LHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
           +  L   +     ++  +M   W    + + RP+ R +   ++
Sbjct: 279 NGRLPRPDGCPDEIYM-IMTECW--NNNVNQRPSFRDLALRVD 318

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score =  141 bits (357), Expect = 4e-37
 Identities = 70/292 (23%), Positives = 133/292 (45%), Gaps = 44/292 (15%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH---VAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKN 560
            ++ +G G FG VYKG +   S      VA+K L + + + ++ +F  E   +GQ  H N
Sbjct: 48  RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHN 107

Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--GIAGGLFYLHEE 618
           ++RL G   + +  +++ E+M NG +  FL  +    + +   + M  GIA G+ YL   
Sbjct: 108 IIRLEGVISKYKPMMIITEYMENGALDKFL-REKDGEFSVLQLVGMLRGIAAGMKYLANM 166

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV---APEWF 675
                +H D+  +NIL++ +   ++SDFGL+++L  D   T T   G K  +   APE  
Sbjct: 167 NY---VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTT-SGGKIPIRWTAPEAI 222

Query: 676 RNMPITVKVDVYSYGVLLLEIICLRR----NIDNE--ISKVDKAILTDWAYDRYQERTLE 729
                T   DV+S+G+++ E++         + N   +  ++              R   
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG-----------FR--- 268

Query: 730 ALVENDLEAMNNVT-MLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
                 L    +    +++ +M+  W  Q++ + RP    +  +L+ ++  P
Sbjct: 269 ------LPTPMDCPSAIYQ-LMMQCW--QQERARRPKFADIVSILDKLIRAP 311

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  140 bits (355), Expect = 4e-37
 Identities = 61/284 (21%), Positives = 110/284 (38%), Gaps = 48/284 (16%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA---EVNGIGQTHHKNLVR 563
           +++GRG F  VY+    +     VA+KK+        K       E++ + Q +H N+++
Sbjct: 38  KKIGRGQFSEVYRAA-CLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIK 96

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFL--FGDSKPN------WKLRTEIAMGIAGGLFYL 615
                 E     +V E    G ++  +  F   K        WK   ++       L ++
Sbjct: 97  YYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA----LEHM 152

Query: 616 HEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF 675
           H     +++H DIKP N+ +      ++ D GL +  +   +  ++ + GT  Y++PE  
Sbjct: 153 HSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSPERI 208

Query: 676 RNMPITVKVDVYSYGVLLLEIICLRR-------NIDNEISKVDKAILTDWAYDRYQERTL 728
                  K D++S G LL E+  L+        N+ +   K+++        D Y E   
Sbjct: 209 HENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEE-- 266

Query: 729 EALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM 772
                           L + V     CI  DP  RP +  V  +
Sbjct: 267 ----------------LRQLVN---MCINPDPEKRPDVTYVYDV 291

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score =  139 bits (352), Expect = 9e-37
 Identities = 68/291 (23%), Positives = 123/291 (42%), Gaps = 30/291 (10%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSN---HVAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKN 560
              +LG G FG V     +    N    VAVK L      +   + K E+  +   +H+N
Sbjct: 25  RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHEN 84

Query: 561 LVRLLGYC--DEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYLH 616
           +V+  G C  D G    L+ EF+ +G++  +L   +K    L+   + A+ I  G+ YL 
Sbjct: 85  IVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYLG 143

Query: 617 EECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV---APE 673
                  +H D+  +N+L++  +  +I DFGL K +  D+ +  T        V   APE
Sbjct: 144 SRQY---VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYY-TVKDDRDSPVFWYAPE 199

Query: 674 WFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVE 733
                   +  DV+S+GV L E++        +      A+        + + T+  LV 
Sbjct: 200 CLMQSKFYIASDVWSFGVTLHELLTY-----CDSDSSPMALFLKMIGPTHGQMTVTRLVN 254

Query: 734 ND-----LEAMNNVTM-LHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
                  L    N    +++ +M   W  +  PS+R + + + +  E +++
Sbjct: 255 TLKEGKRLPCPPNCPDEVYQ-LMRKCW--EFQPSNRTSFQNLIEGFEALLK 302

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score =  139 bits (353), Expect = 1e-36
 Identities = 71/291 (24%), Positives = 134/291 (46%), Gaps = 43/291 (14%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH--VAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNL 561
            ++ +G G  G V  G + +       VA+K L + + + ++ +F +E + +GQ  H N+
Sbjct: 53  IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNI 112

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--GIAGGLFYLHEEC 619
           +RL G    G+  ++V E+M NG++ +FL       + +   + M  G+  G+ YL +  
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFL-RTHDGQFTIMQLVGMLRGVGAGMRYLSDLG 171

Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV---APEWFR 676
               +H D+  +N+L+D +   ++SDFGL+++L  D         G K  +   APE   
Sbjct: 172 Y---VHRDLAARNVLVDSNLVCKVSDFGLSRVLE-DDPDAAYTTTGGKIPIRWTAPEAIA 227

Query: 677 NMPITVKVDVYSYGVLLLEIICLRR----NIDNE--ISKVDKAILTDWAYDRYQERTLEA 730
               +   DV+S+GV++ E++        N+ N   IS V++             R    
Sbjct: 228 FRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG-----------YR---- 272

Query: 731 LVENDLEAMNN-VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
                L A       LH+ +M+  W   +D + RP   ++  +L+ ++  P
Sbjct: 273 -----LPAPMGCPHALHQ-LMLDCW--HKDRAQRPRFSQIVSVLDALIRSP 315

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score =  137 bits (347), Expect = 2e-36
 Identities = 71/284 (25%), Positives = 124/284 (43%), Gaps = 35/284 (12%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           F +E+G G FG V+ G+    + + VA+K +       E++F  E   + +  H  LV+L
Sbjct: 12  FVQEIGSGQFGLVHLGYWL--NKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQL 68

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFL-FGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
            G C E     LV EFM +G ++ +L         +    + + +  G+ YL E C    
Sbjct: 69  YGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV--- 125

Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV---APEWFRNMPI 680
           IH D+  +N L+ ++   ++SDFG+ + +  DQ    T+  GTK  V   +PE F     
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ---YTSSTGTKFPVKWASPEVFSFSRY 182

Query: 681 TVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND--LEA 738
           + K DV+S+GVL+ E+    +                  Y+      +   +     L  
Sbjct: 183 SSKSDVWSFGVLMWEVFSEGKI----------------PYENRSNSEVVEDISTGFRLYK 226

Query: 739 MNNV-TMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPI 781
                T +++ +M   W  +E P  RP   ++ + L  + E  +
Sbjct: 227 PRLASTHVYQ-IMNHCW--RERPEDRPAFSRLLRQLAEIAESGL 267

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score =  138 bits (351), Expect = 2e-36
 Identities = 67/292 (22%), Positives = 114/292 (39%), Gaps = 46/292 (15%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSN---HVAVKKLNSVFQD-SEKEFKAEVNGIGQTHHKN 560
             + LG G FGTV+KG       +    V +K +       S +     +  IG   H +
Sbjct: 17  KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAH 76

Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYLHEE 618
           +VRLLG C  G +  LV +++  G++   +    +     +      + IA G++YL E 
Sbjct: 77  IVRLLGLC-PGSSLQLVTQYLPLGSLLDHV-RQHRGALGPQLLLNWGVQIAKGMYYLEEH 134

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV---APEWF 675
                +H ++  +N+LL      +++DFG+A LL  D           K  +   A E  
Sbjct: 135 GM---VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLY--SEAKTPIKWMALESI 189

Query: 676 RNMPITVKVDVYSYGVLLLEIICLRR----NIDNE--ISKVDKAILTDWAYDRYQERTLE 729
                T + DV+SYGV + E++         +        ++K            ER   
Sbjct: 190 HFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKG-----------ER--- 235

Query: 730 ALVENDLEAMNNVTM-LHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
                 L      T+ ++  VMV  W    D + RPT +++      +   P
Sbjct: 236 ------LAQPQICTIDVYM-VMVKCW--MIDENIRPTFKELANEFTRMARDP 278

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score =  140 bits (354), Expect = 2e-36
 Identities = 75/291 (25%), Positives = 135/291 (46%), Gaps = 43/291 (14%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH--VAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNL 561
             + +G G FG V  G + + S     VA+K L   + + ++ +F  E + +GQ  H N+
Sbjct: 49  IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 108

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--GIAGGLFYLHEEC 619
           +RL G   + +  ++V E+M NG++ SFL       + +   + M  GIA G+ YL +  
Sbjct: 109 IRLEGVVTKSKPVMIVTEYMENGSLDSFL-RKHDAQFTVIQLVGMLRGIASGMKYLSDMG 167

Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV---APEWFR 676
               +H D+  +NIL++ +   ++SDFGL ++L  D        RG K  +   +PE   
Sbjct: 168 Y---VHRDLAARNILINSNLVCKVSDFGLGRVLE-DDPEAAYTTRGGKIPIRWTSPEAIA 223

Query: 677 NMPITVKVDVYSYGVLLLEIICLRR----NIDNE--ISKVDKAILTDWAYDRYQERTLEA 730
               T   DV+SYG++L E++         + N+  I  VD+             R    
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG-----------YR---- 268

Query: 731 LVENDLEAMNN-VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
                L    +    L++ +M+  W  Q+D ++RP   ++  +L+ ++  P
Sbjct: 269 -----LPPPMDCPAALYQ-LMLDCW--QKDRNNRPKFEQIVSILDKLIRNP 311

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score =  137 bits (348), Expect = 2e-36
 Identities = 78/284 (27%), Positives = 128/284 (45%), Gaps = 35/284 (12%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            K +LG G +G VY+G      S  VAVK L     + E EF  E   + +  H NLV+L
Sbjct: 17  MKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 74

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--GIAGGLFYLHEECCTQ 622
           LG C       ++ EFM+ G +  +L   ++        + M   I+  + YL ++    
Sbjct: 75  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF-- 132

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV---APEWFRNMP 679
            IH D+  +N L+ +++  +++DFGL++L+T D     TA  G K  +   APE      
Sbjct: 133 -IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT---YTAHAGAKFPIKWTAPESLAYNK 188

Query: 680 ITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND--LE 737
            ++K DV+++GVLL EI     +                 Y       +  L+E D  +E
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMS----------------PYPGIDLSQVYELLEKDYRME 232

Query: 738 AMNNV-TMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
                   ++  +M A W  Q +PS RP+  ++ Q  E + +  
Sbjct: 233 RPEGCPEKVYE-LMRACW--QWNPSDRPSFAEIHQAFETMFQES 273

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score =  136 bits (346), Expect = 4e-36
 Identities = 76/280 (27%), Positives = 118/280 (42%), Gaps = 41/280 (14%)

Query: 508 ELGRGAFGTVYKGFVNMGSSN-HVAVK--KLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           ELG G FGTV KG+  M      VAVK  K  +     + E  AE N + Q  +  +VR+
Sbjct: 24  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
           +G C E ++ +LV E    G +  +L  +     K   E+   ++ G+ YL E      +
Sbjct: 84  IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNF---V 139

Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV---APEWFRNMPIT 681
           H D+  +N+LL   + A+ISDFGL+K L  D+++   A    K  V   APE       +
Sbjct: 140 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYY-KAQTHGKWPVKWYAPECINYYKFS 198

Query: 682 VKVDVYSYGVLLLEIICLRR----NIDNE--ISKVDKAILTDWAYDRYQERTLEALVEND 735
            K DV+S+GVL+ E     +     +      + ++K            ER         
Sbjct: 199 SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG-----------ER--------- 238

Query: 736 LEAMNNVTM-LHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
           +         ++  +M   W    D  +RP    V   L 
Sbjct: 239 MGCPAGCPREMYD-LMNLCW--TYDVENRPGFAAVELRLR 275

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score =  141 bits (356), Expect = 5e-36
 Identities = 74/279 (26%), Positives = 122/279 (43%), Gaps = 39/279 (13%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            + +LG+G FG V+ G  N   +  VA+K L       E  F  E   + +  H+ LV+L
Sbjct: 188 LEVKLGQGCFGEVWMGTWNG--TTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL 244

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYLHEECCTQ 622
                E +   +V E+MS G++  FL G++    +L    ++A  IA G+ Y+       
Sbjct: 245 YAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY-- 301

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ----SHTNTAIRGTKGYVAPEWFRNM 678
            +H D++  NIL+ ++   +++DFGLA+L+  ++          I+ T    APE     
Sbjct: 302 -VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYG 356

Query: 679 PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND--L 736
             T+K DV+S+G+LL E+    R                  Y     R +   VE    +
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGRV----------------PYPGMVNREVLDQVERGYRM 400

Query: 737 EAMNNV-TMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
                    LH  +M   W  +++P  RPT   +   LE
Sbjct: 401 PCPPECPESLHD-LMCQCW--RKEPEERPTFEYLQAFLE 436

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  136 bits (344), Expect = 6e-36
 Identities = 65/281 (23%), Positives = 112/281 (39%), Gaps = 39/281 (13%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEF-KAEVNGIGQTHHKNLVRL 564
             +G G++G   K          +  K+L+     ++EK+   +EVN + +  H N+VR 
Sbjct: 12  YTIGTGSYGRCQKI-RRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRY 70

Query: 565 LG-YCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG----IAGGLFYLHE- 617
                D     L +V E+   G +AS +   +K    L  E  +     +   L   H  
Sbjct: 71  YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130

Query: 618 -ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR 676
            +    ++H D+KP N+ LD   N ++ DFGLA++L  D S   T + GT  Y++PE   
Sbjct: 131 SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPEQMN 189

Query: 677 NMPITVKVDVYSYGVLLLEIICLRR-----NIDNEISKVDKAILTDWAYDRYQERTLEAL 731
            M    K D++S G LL E+  L       +      K+ +         RY +  L  +
Sbjct: 190 RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIP-YRYSDE-LNEI 247

Query: 732 VENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM 772
           +                       +     HRP++ ++ + 
Sbjct: 248 IT--------------------RMLNLKDYHRPSVEEILEN 268

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score =  142 bits (359), Expect = 7e-36
 Identities = 72/282 (25%), Positives = 122/282 (43%), Gaps = 45/282 (15%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            + +LG+G FG V+ G  N   +  VA+K L       E  F  E   + +  H+ LV+L
Sbjct: 271 LEVKLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL 327

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYLHEECCTQ 622
                E +   +V E+MS G++  FL G++    +L    ++A  IA G+ Y+       
Sbjct: 328 YAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY-- 384

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ----SHTNTAIRGTKGYVAPEWFRNM 678
            +H D++  NIL+ ++   +++DFGLA+L+  ++          I+ T    APE     
Sbjct: 385 -VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT----APEAALYG 439

Query: 679 PITVKVDVYSYGVLLLEIICLRR----NIDNEISKVDKAILTDWAYDRYQERTLEALVEN 734
             T+K DV+S+G+LL E+    R     + N                      L+ +   
Sbjct: 440 RFTIKSDVWSFGILLTELTTKGRVPYPGMVN-------------------REVLDQVERG 480

Query: 735 D-LEAMNNV-TMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
             +         LH  +M   W  +++P  RPT   +   LE
Sbjct: 481 YRMPCPPECPESLHD-LMCQCW--RKEPEERPTFEYLQAFLE 519

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score =  140 bits (355), Expect = 7e-36
 Identities = 72/281 (25%), Positives = 120/281 (42%), Gaps = 43/281 (15%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            +++LG G FG V+    N      VAVK +        + F AE N +    H  LV+L
Sbjct: 192 LEKKLGAGQFGEVWMATYN--KHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKL 248

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYLHEECCTQ 622
                + +   ++ EFM+ G++  FL  D      L    + +  IA G+ ++ +     
Sbjct: 249 HAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY-- 305

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV---APEWFRNMP 679
            IH D++  NIL+      +I+DFGLA+++  ++    TA  G K  +   APE      
Sbjct: 306 -IHRDLRAANILVSASLVCKIADFGLARVIEDNE---YTAREGAKFPIKWTAPEAINFGS 361

Query: 680 ITVKVDVYSYGVLLLEIICLRR----NIDNEISKVDKAILTDWAYDRYQERTLEALVEND 735
            T+K DV+S+G+LL+EI+   R     + N                      + AL    
Sbjct: 362 FTIKSDVWSFGILLMEIVTYGRIPYPGMSN-------------------PEVIRALERGY 402

Query: 736 -LEAMNNV-TMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
            +    N    L+  +M+  W  +  P  RPT   +  +L+
Sbjct: 403 RMPRPENCPEELYN-IMMRCW--KNRPEERPTFEYIQSVLD 440

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score =  136 bits (345), Expect = 1e-35
 Identities = 68/282 (24%), Positives = 118/282 (41%), Gaps = 22/282 (7%)

Query: 505 FKEELGRGAFGTVYKGFVNM---GSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKN 560
              +LG G FG V     +    G+   VAVK L +         +K E++ +   +H++
Sbjct: 35  KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEH 94

Query: 561 LVRLLGYC--DEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
           +++  G C      +  LV E++  G++  +L   S    +L    A  I  G+ YLH +
Sbjct: 95  IIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQL-LLFAQQICEGMAYLHAQ 153

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV---APEWF 675
                IH D+  +N+LLD+    +I DFGLAK +     +           V   APE  
Sbjct: 154 HY---IHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY-RVREDGDSPVFWYAPECL 209

Query: 676 RNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND 735
           +        DV+S+GV L E++    +  +  +K  + I       +     L  L+E  
Sbjct: 210 KEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIA--QGQMTVLRLTELLERG 267

Query: 736 --LEAMNNVTM-LHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
             L   +     ++  +M   W  + + S RPT   +  +L+
Sbjct: 268 ERLPRPDKCPAEVYH-LMKNCW--ETEASFRPTFENLIPILK 306

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score =  140 bits (354), Expect = 1e-35
 Identities = 69/279 (24%), Positives = 120/279 (43%), Gaps = 43/279 (15%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
             + +G+G FG V  G       N VAVK + +    + + F AE + + Q  H NLV+L
Sbjct: 197 LLQTIGKGEFGDVMLGDYR---GNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQL 251

Query: 565 LGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYLHEECCT 621
           LG   E +  L +V E+M+ G++  +L    +         + ++ +   + YL      
Sbjct: 252 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF- 310

Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT 681
             +H D+  +N+L+ +   A++SDFGL K  +  Q      ++ T    APE  R    +
Sbjct: 311 --VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFS 364

Query: 682 VKVDVYSYGVLLLEIICLRR----NIDNEISKVDKAILTDWAYDRYQERTLEALVEND-L 736
            K DV+S+G+LL EI    R     I                     +  +  + +   +
Sbjct: 365 TKSDVWSFGILLWEIYSFGRVPYPRIPL-------------------KDVVPRVEKGYKM 405

Query: 737 EAMNNV-TMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
           +A +     ++  VM   W    D + RPT  ++ + LE
Sbjct: 406 DAPDGCPPAVYD-VMKNCW--HLDAATRPTFLQLREQLE 441

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score =  135 bits (342), Expect = 1e-35
 Identities = 64/285 (22%), Positives = 118/285 (41%), Gaps = 43/285 (15%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           F +ELG G FG V  G         VA+K +       E EF  E   +    H+ LV+L
Sbjct: 28  FLKELGTGQFGVVKYGKWR--GQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQL 84

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFL-FGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
            G C + +   ++ E+M+NG + ++L     +   +   E+   +   + YL  +     
Sbjct: 85  YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQF--- 141

Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV---APEWFRNMPI 680
           +H D+  +N L++D    ++SDFGL++ +  D+    T+  G+K  V    PE       
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMYSKF 198

Query: 681 TVKVDVYSYGVLLLEIICLRR----NIDNE--ISKVDKAILTDWAYDRYQERTLEALVEN 734
           + K D++++GVL+ EI  L +       N      + +           +          
Sbjct: 199 SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ---------GLR---------- 239

Query: 735 DLEAMNNV-TMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
            L   +     ++  +M + W   E    RPT + +   +  V++
Sbjct: 240 -LYRPHLASEKVYT-IMYSCW--HEKADERPTFKILLSNILDVMD 280

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score =  135 bits (341), Expect = 1e-35
 Identities = 69/281 (24%), Positives = 115/281 (40%), Gaps = 43/281 (15%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
             +ELG G FG V  G         VAVK +       + EF  E   + +  H  LV+ 
Sbjct: 12  LLKELGSGQFGVVKLGKWK--GQYDVAVKMIKEGSMSED-EFFQEAQTMMKLSHPKLVKF 68

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFL-FGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
            G C +     +V E++SNG + ++L             E+   +  G+ +L        
Sbjct: 69  YGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQF--- 125

Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV---APEWFRNMPI 680
           IH D+  +N L+D     ++SDFG+ + +  DQ     +  GTK  V   APE F     
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ---YVSSVGTKFPVKWSAPEVFHYFKY 182

Query: 681 TVKVDVYSYGVLLLEIICLRR----NIDNE--ISKVDKAILTDWAYDRYQERTLEALVEN 734
           + K DV+++G+L+ E+  L +       N   + KV +             R        
Sbjct: 183 SSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQG-----------HR-------- 223

Query: 735 DLEAMNNV-TMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
            L   +     +++ +M + W   E P  RPT +++   +E
Sbjct: 224 -LYRPHLASDTIYQ-IMYSCW--HELPEKRPTFQQLLSSIE 260

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score =  134 bits (340), Expect = 3e-35
 Identities = 72/285 (25%), Positives = 112/285 (39%), Gaps = 41/285 (14%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH--VAVKKLNSVFQDSEK---EFKAEVNGIGQTHHK 559
             E+LG G+FG V +G  +  S     VAVK L        +   +F  EVN +    H+
Sbjct: 22  LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 81

Query: 560 NLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYLHE 617
           NL+RL G         +V E    G++   L    + ++ L T    A+ +A G+ YL  
Sbjct: 82  NLIRLYGVV-LTPPMKMVTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYLES 139

Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV---APEW 674
           +     IH D+  +N+LL      +I DFGL + L  +  H        K      APE 
Sbjct: 140 KRF---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY-VMQEHRKVPFAWCAPES 195

Query: 675 FRNMPITVKVDVYSYGVLLLEIICLRR----NIDNEISKVDKAILTDWAYDRYQERTLEA 730
            +    +   D + +GV L E+    +     ++   S++   I      D+  ER    
Sbjct: 196 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG--SQILHKI------DKEGER---- 243

Query: 731 LVENDLEAMNNVTM-LHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
                L    +    ++  VMV  W     P  RPT   +   L 
Sbjct: 244 -----LPRPEDCPQDIYN-VMVQCW--AHKPEDRPTFVALRDFLL 280

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score =  134 bits (340), Expect = 3e-35
 Identities = 71/283 (25%), Positives = 118/283 (41%), Gaps = 43/283 (15%)

Query: 506 KEELGRGAFGTVYKGFVNMGSSN-HVAVKKL-NSVFQDSEKEFKAEVNGIGQTHHKNLVR 563
             ELG G FG+V +G   M      VA+K L     +   +E   E   + Q  +  +VR
Sbjct: 15  DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 74

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFL--FGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           L+G C + +  +LV E    G +  FL    +  P   +  E+   ++ G+ YL E+   
Sbjct: 75  LIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNV-AELLHQVSMGMKYLEEKNF- 131

Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV---APEWFRNM 678
             +H D+  +N+LL + + A+ISDFGL+K L  D S+  TA    K  +   APE     
Sbjct: 132 --VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYY-TARSAGKWPLKWYAPECINFR 188

Query: 679 PITVKVDVYSYGVLLLEIICLRR----NIDNE--ISKVDKAILTDWAYDRYQERTLEALV 732
             + + DV+SYGV + E +   +     +     ++ +++            +R      
Sbjct: 189 KFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG-----------KR------ 231

Query: 733 ENDLEAMNNVTM-LHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
              +E        L+  +M   W        RP    V Q + 
Sbjct: 232 ---MECPPECPPELYA-LMSDCW--IYKWEDRPDFLTVEQRMR 268

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score =  134 bits (339), Expect = 3e-35
 Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 37/276 (13%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
             + +G+G FG V  G       N VAVK + +    + + F AE + + Q  H NLV+L
Sbjct: 25  LLQTIGKGEFGDVMLGDYR---GNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQL 79

Query: 565 LGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--GIAGGLFYLHEECCT 621
           LG   E +  L +V E+M+ G++  +L    +        +     +   + YL      
Sbjct: 80  LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF- 138

Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT 681
             +H D+  +N+L+ +   A++SDFGL K  +  Q      ++ T    APE  R    +
Sbjct: 139 --VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT----APEALREKKFS 192

Query: 682 VKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND--LEAM 739
            K DV+S+G+LL EI    R                  Y R   + +   VE    ++A 
Sbjct: 193 TKSDVWSFGILLWEIYSFGRV----------------PYPRIPLKDVVPRVEKGYKMDAP 236

Query: 740 NNV-TMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
           +     ++  VM   W    D + RP+  ++ + LE
Sbjct: 237 DGCPPAVYE-VMKNCW--HLDAAMRPSFLQLREQLE 269

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score =  135 bits (342), Expect = 3e-35
 Identities = 72/292 (24%), Positives = 116/292 (39%), Gaps = 46/292 (15%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSN---HVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKN 560
             + LG GAFGTVYKG            VA+K+L          E   E   +    + +
Sbjct: 19  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPH 78

Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--GIAGGLFYLHEE 618
           + RLLG C       L+ + M  G +  ++  + K N   +  +     IA G+ YL + 
Sbjct: 79  VCRLLGIC-LTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYLEDR 136

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV---APEWF 675
                +H D+  +N+L+    + +I+DFGLAKLL  ++   +    G K  +   A E  
Sbjct: 137 RL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALESI 191

Query: 676 RNMPITVKVDVYSYGVLLLEIICLRR----NIDNE--ISKVDKAILTDWAYDRYQERTLE 729
            +   T + DV+SYGV + E++         I      S ++K            ER   
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG-----------ER--- 237

Query: 730 ALVENDLEAMNNVTM-LHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
                 L      T+ ++  +MV  W    D   RP  R++      +   P
Sbjct: 238 ------LPQPPICTIDVYM-IMVKCW--MIDADSRPKFRELIIEFSKMARDP 280

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score =  134 bits (339), Expect = 4e-35
 Identities = 58/296 (19%), Positives = 104/296 (35%), Gaps = 62/296 (20%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH------VAVKKLNSVFQDSEKEFKAEVNGIGQTHH 558
           F E LG+G F  ++KG               V +K L+   ++  + F    + + +  H
Sbjct: 12  FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71

Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFL-FGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           K+LV   G C  G   +LV EF+  G++ ++L    +  N   + E+A  +A  + +L E
Sbjct: 72  KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEE 131

Query: 618 ECCTQIIHCDIKPQNILLDDHYNAR--------ISDFGLAKLLTLDQSHTNTAIRGTKGY 669
                 IH ++  +NILL    + +        +SD G++  + L +      I      
Sbjct: 132 NTL---IHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV-LPKDILQERIPWV--- 184

Query: 670 VAPEWFRNMPI-TVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTL 728
             PE   N     +  D +S+G  L EI                                
Sbjct: 185 -PPECIENPKNLNLATDKWSFGTTLWEICSG-------------------GDKPLSALDS 224

Query: 729 EALVENDLEAMNNVTMLHRF----------VMVAFWCIQEDPSHRPTMRKVTQMLE 774
           +         +      H+           ++        +P HRP+ R + + L 
Sbjct: 225 Q-------RKLQFYEDRHQLPAPKAAELANLINNCM--DYEPDHRPSFRAIIRDLN 271

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  135 bits (342), Expect = 5e-35
 Identities = 61/310 (19%), Positives = 117/310 (37%), Gaps = 46/310 (14%)

Query: 476 MRPHQEDQGVSYMNLRCFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKL 535
           M  H        +      ++ + +  R   +++G G+FG       +        +K++
Sbjct: 1   MHHHHHHSSGVDLGTENLYFQSMEKYVRL--QKIGEGSFGKAILVK-STEDGRQYVIKEI 57

Query: 536 NSVFQDSEKEFKA---EVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFG 592
           N + + S KE +    EV  +    H N+V+     +E  +  +V ++   G +   +  
Sbjct: 58  N-ISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRI-- 114

Query: 593 DSKPNWKLRTE-----IAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFG 647
            +     L  E       + I   L ++H+    +I+H DIK QNI L      ++ DFG
Sbjct: 115 -NAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFG 170

Query: 648 LAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRR-----N 702
           +A++L          I GT  Y++PE   N P   K D+++ G +L E+  L+      +
Sbjct: 171 IARVLNSTVELARACI-GTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS 229

Query: 703 IDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSH 762
           + N + K+            Y                     L   V       + +P  
Sbjct: 230 MKNLVLKIISGSFPPV-SLHYSYD------------------LRSLVS---QLFKRNPRD 267

Query: 763 RPTMRKVTQM 772
           RP++  + + 
Sbjct: 268 RPSVNSILEK 277

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score =  134 bits (339), Expect = 9e-35
 Identities = 79/325 (24%), Positives = 137/325 (42%), Gaps = 58/325 (17%)

Query: 487 YMNLRCFTYKELVEVTRG---FKEELGRGAFGTVYKGFVN----MGSSNHVAVKKLNSVF 539
           Y +       +  EV R       ELG+G+FG VY+G             VA+K +N   
Sbjct: 8   YFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 67

Query: 540 QDSEK-EFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFL------FG 592
              E+ EF  E + + + +  ++VRLLG   +GQ  L++ E M+ G + S+L        
Sbjct: 68  SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMA 127

Query: 593 DSKPNWKLR----TEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGL 648
           ++            ++A  IA G+ YL+       +H D+  +N ++ + +  +I DFG+
Sbjct: 128 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGM 184

Query: 649 AKLLTLDQSHTNTAIRGTKGYV-----APEWFRNMPITVKVDVYSYGVLLLEIICLRRNI 703
            +    D   T+   +G KG +     +PE  ++   T   DV+S+GV+L EI  L    
Sbjct: 185 TR----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL---- 236

Query: 704 DNEISKVDKAILTDWAYDRYQERTLEALVE-----NDLEAMNNV-TMLHRFVMVAFWCIQ 757
                          A   YQ  + E ++        L+  +N   ML   +M   W  Q
Sbjct: 237 ---------------AEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFE-LMRMCW--Q 278

Query: 758 EDPSHRPTMRKVTQMLEGVVEVPIP 782
            +P  RP+  ++   ++  +E    
Sbjct: 279 YNPKMRPSFLEIISSIKEEMEPGFR 303

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score =  134 bits (339), Expect = 9e-35
 Identities = 85/310 (27%), Positives = 125/310 (40%), Gaps = 58/310 (18%)

Query: 500 EVTRG---FKEELGRGAFGTVYKGFVN----MGSSNHVAVKKLNSVFQDSEK-EFKAEVN 551
           EV R        LG GAFG VY+G V+      S   VAVK L  V  + ++ +F  E  
Sbjct: 26  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 85

Query: 552 GIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFL-------FGDSKPNWKLRTEI 604
            I + +H+N+VR +G   +   R ++ E M+ G + SFL          S         +
Sbjct: 86  IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 145

Query: 605 AMGIAGGLFYLHEECCTQIIHCDIKPQNILLD---DHYNARISDFGLAKLLTLDQSHTNT 661
           A  IA G  YL E      IH DI  +N LL        A+I DFG+A+    D    + 
Sbjct: 146 ARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASY 198

Query: 662 AIRGTKGYV-----APEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILT 716
             +G    +      PE F     T K D +S+GVLL EI  L                 
Sbjct: 199 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL----------------- 241

Query: 717 DWAYDRYQERTLEALVE-----NDLEAMNNV-TMLHRFVMVAFWCIQEDPSHRPTMRKVT 770
              Y  Y  ++ + ++E       ++   N    ++R +M   W  Q  P  RP    + 
Sbjct: 242 --GYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR-IMTQCW--QHQPEDRPNFAIIL 296

Query: 771 QMLEGVVEVP 780
           + +E   + P
Sbjct: 297 ERIEYCTQDP 306

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score =  132 bits (335), Expect = 1e-34
 Identities = 64/285 (22%), Positives = 116/285 (40%), Gaps = 46/285 (16%)

Query: 505 FKEELGRGAFGTVYKGFVNM--GSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNL 561
               LG G FG VY+G      G   +VAVK        D++++F +E   +    H ++
Sbjct: 16  LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI 75

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--GIAGGLFYLHEEC 619
           V+L+G  +E +   ++ E    G +  +L   +K + K+ T +     I   + YL    
Sbjct: 76  VKLIGIIEE-EPTWIIMELYPYGELGHYL-ERNKNSLKVLTLVLYSLQICKAMAYLESIN 133

Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV---APEWFR 676
           C   +H DI  +NIL+      ++ DFGL++ +   +         T+  +   +PE   
Sbjct: 134 C---VHRDIAVRNILVASPECVKLGDFGLSRYI---EDEDYYKASVTRLPIKWMSPESIN 187

Query: 677 NMPITVKVDVYSYGVLLLEIICLRR----NIDNE--ISKVDKAILTDWAYDRYQERTLEA 730
               T   DV+ + V + EI+   +     ++N+  I  ++K            +R    
Sbjct: 188 FRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKG-----------DR---- 232

Query: 731 LVENDLEAMNNVT-MLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
                L   +    +L+  +M   W    DPS RP   ++   L 
Sbjct: 233 -----LPKPDLCPPVLYT-LMTRCW--DYDPSDRPRFTELVCSLS 269

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score =  132 bits (334), Expect = 2e-34
 Identities = 67/291 (23%), Positives = 115/291 (39%), Gaps = 46/291 (15%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH--VAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNL 561
               +G G FG V++G      +    VA+K   +   DS + +F  E   + Q  H ++
Sbjct: 19  LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 78

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--GIAGGLFYLHEEC 619
           V+L+G   E     ++ E  + G + SFL    K +  L + I     ++  L YL  + 
Sbjct: 79  VKLIGVITE-NPVWIIMELCTLGELRSFL-QVRKYSLDLASLILYAYQLSTALAYLESKR 136

Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV---APEWFR 676
               +H DI  +N+L+  +   ++ DFGL++ +   +  T       K  +   APE   
Sbjct: 137 F---VHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPESIN 190

Query: 677 NMPITVKVDVYSYGVLLLEIICLRR----NIDNE--ISKVDKAILTDWAYDRYQERTLEA 730
               T   DV+ +GV + EI+         + N   I +++             ER    
Sbjct: 191 FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG-----------ER---- 235

Query: 731 LVENDLEAMNNVT-MLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
                L    N    L+  +M   W    DPS RP   ++   L  ++E  
Sbjct: 236 -----LPMPPNCPPTLYS-LMTKCW--AYDPSRRPRFTELKAQLSTILEEE 278

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score =  132 bits (334), Expect = 3e-34
 Identities = 68/321 (21%), Positives = 117/321 (36%), Gaps = 75/321 (23%)

Query: 500 EVTRG---FKEELGRGAFGTVYKGFVN----MGSSNHVAVKKLNSVFQDSEKEFKAEVNG 552
            + R     K ELG GAFG V+               VAVK L      + K+F+ E   
Sbjct: 11  HIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAEL 70

Query: 553 IGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR----------- 601
           +    H+++V+  G C +G   ++V+E+M +G +  FL         L            
Sbjct: 71  LTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGEL 130

Query: 602 -----TEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ 656
                  IA  IA G+ YL  +     +H D+  +N L+  +   +I DFG+++ +    
Sbjct: 131 GLSQMLHIASQIASGMVYLASQHF---VHRDLATRNCLVGANLLVKIGDFGMSRDVYSTD 187

Query: 657 ---SHTNTA--IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVD 711
                 +T   IR       PE       T + DV+S+GV+L EI               
Sbjct: 188 YYRVGGHTMLPIRWM----PPESIMYRKFTTESDVWSFGVILWEIFTY------------ 231

Query: 712 KAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRF------------VMVAFWCIQED 759
                      + + +         E +  +T                 VM+  W  Q +
Sbjct: 232 -------GKQPWFQLSNT-------EVIECITQGRVLERPRVCPKEVYDVMLGCW--QRE 275

Query: 760 PSHRPTMRKVTQMLEGVVEVP 780
           P  R  ++++ ++L  + +  
Sbjct: 276 PQQRLNIKEIYKILHALGKAT 296

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score =  131 bits (331), Expect = 4e-34
 Identities = 81/281 (28%), Positives = 126/281 (44%), Gaps = 43/281 (15%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
             E LG G FG V+ G+ N      VAVK L       +  F AE N + Q  H+ LVRL
Sbjct: 17  LVERLGAGQFGEVWMGYYN--GHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRL 73

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYLHEECCTQ 622
                + +   ++ E+M NG++  FL   S     +    ++A  IA G+ ++ E     
Sbjct: 74  YAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY-- 130

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV---APEWFRNMP 679
            IH D++  NIL+ D  + +I+DFGLA+L+  ++    TA  G K  +   APE      
Sbjct: 131 -IHRDLRAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGT 186

Query: 680 ITVKVDVYSYGVLLLEIICLRR----NIDNEISKVDKAILTDWAYDRYQERTLEALVEND 735
            T+K DV+S+G+LL EI+   R     + N                      ++ L    
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTN-------------------PEVIQNLERGY 227

Query: 736 -LEAMNNV-TMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
            +   +N    L++ +M   W  +E P  RPT   +  +LE
Sbjct: 228 RMVRPDNCPEELYQ-LMRLCW--KERPEDRPTFDYLRSVLE 265

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score =  133 bits (337), Expect = 4e-34
 Identities = 84/310 (27%), Positives = 125/310 (40%), Gaps = 58/310 (18%)

Query: 500 EVTRG---FKEELGRGAFGTVYKGFVN----MGSSNHVAVKKLNSVFQDSEK-EFKAEVN 551
           EV R        LG GAFG VY+G V+      S   VAVK L  V  + ++ +F  E  
Sbjct: 67  EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEAL 126

Query: 552 GIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFL-----FGDSKPNWKLR--TEI 604
            I + +H+N+VR +G   +   R ++ E M+ G + SFL           +  +     +
Sbjct: 127 IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 186

Query: 605 AMGIAGGLFYLHEECCTQIIHCDIKPQNILLD---DHYNARISDFGLAKLLTLDQSHTNT 661
           A  IA G  YL E      IH DI  +N LL        A+I DFG+A+    D      
Sbjct: 187 ARDIACGCQYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRAGY 239

Query: 662 AIRGTKGYV-----APEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILT 716
             +G    +      PE F     T K D +S+GVLL EI  L                 
Sbjct: 240 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL----------------- 282

Query: 717 DWAYDRYQERTLEALVE-----NDLEAMNNV-TMLHRFVMVAFWCIQEDPSHRPTMRKVT 770
              Y  Y  ++ + ++E       ++   N    ++R +M   W  Q  P  RP    + 
Sbjct: 283 --GYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYR-IMTQCW--QHQPEDRPNFAIIL 337

Query: 771 QMLEGVVEVP 780
           + +E   + P
Sbjct: 338 ERIEYCTQDP 347

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score =  132 bits (334), Expect = 4e-34
 Identities = 69/320 (21%), Positives = 119/320 (37%), Gaps = 74/320 (23%)

Query: 500 EVTRG---FKEELGRGAFGTVYKGFVN----MGSSNHVAVKKLNSVFQDSEKEFKAEVNG 552
            + R     K ELG GAFG V+    +          VAVK L    + + ++F+ E   
Sbjct: 37  HIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAEL 96

Query: 553 IGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFL---------------FGDSKPN 597
           +    H+++VR  G C EG+  L+V+E+M +G +  FL                      
Sbjct: 97  LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 156

Query: 598 WKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS 657
                 +A  +A G+ YL        +H D+  +N L+      +I DFG+++    D  
Sbjct: 157 LGQLLAVASQVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSR----DIY 209

Query: 658 HTNTAIRGTKGYV-----APEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDK 712
            T+    G +  +      PE       T + DV+S+GV+L EI                
Sbjct: 210 STDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTY------------- 256

Query: 713 AILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRF------------VMVAFWCIQEDP 760
                     + + +         EA++ +T                 +M   W  Q +P
Sbjct: 257 ------GKQPWYQLSNT-------EAIDCITQGRELERPRACPPEVYAIMRGCW--QREP 301

Query: 761 SHRPTMRKVTQMLEGVVEVP 780
             R +++ V   L+ + + P
Sbjct: 302 QQRHSIKDVHARLQALAQAP 321

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  130 bits (330), Expect = 8e-34
 Identities = 54/298 (18%), Positives = 105/298 (35%), Gaps = 59/298 (19%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE-FKAEVNGIGQTHHKNLVRLL 565
           + LGRG FG V++   N     + A+K++    ++  +E    EV  + +  H  +VR  
Sbjct: 11  QCLGRGGFGVVFEA-KNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYF 69

Query: 566 GYCDEGQN---------RLLVY---EFMSNGTVASFLF---GDSKPNWKLRTEIAMGIAG 610
               E            ++ +Y   +      +  ++       +    +   I + IA 
Sbjct: 70  NAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAE 129

Query: 611 GLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR------ 664
            + +LH +    ++H D+KP NI        ++ DFGL   +  D+              
Sbjct: 130 AVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYAR 186

Query: 665 -----GTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC---LRRNIDNEISKVDKAILT 716
                GTK Y++PE       + KVD++S G++L E++     +      ++ V      
Sbjct: 187 HTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQMERVRTLTDVRNLKFP 246

Query: 717 DWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
                +Y       +V+                      +   P  RP       ++E
Sbjct: 247 PLFTQKYPC--EYVMVQ--------------------DMLSPSPMERPE---AINIIE 279

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  130 bits (328), Expect = 1e-33
 Identities = 59/284 (20%), Positives = 109/284 (38%), Gaps = 56/284 (19%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           E +G G FG V+K   +        +K++     ++EK  + EV  + +  H N+V   G
Sbjct: 17  ELIGSGGFGQVFKA-KHRIDGKTYVIKRVK---YNNEKAER-EVKALAKLDHVNIVHYNG 71

Query: 567 YCDEGQNRLLVYEFMSNGTVASFLF--------GD-----SKPNWKLRTE-----IAMGI 608
             D            S+ +    LF        G       K   +   +     +   I
Sbjct: 72  CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQI 131

Query: 609 AGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG 668
             G+ Y+H +   ++I+ D+KP NI L D    +I DFGL   L  D   T +   GT  
Sbjct: 132 TKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSK--GTLR 186

Query: 669 YVAPEWFRNMPITVKVDVYSYGVLLLEIICLRR---NIDNEISKVDKAILTDWAYDRYQE 725
           Y++PE   +     +VD+Y+ G++L E++ +           + +   I+     D + +
Sbjct: 187 YMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGII----SDIFDK 242

Query: 726 RTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKV 769
           +  + L++                      + + P  RP   ++
Sbjct: 243 K-EKTLLQ--------------------KLLSKKPEDRPNTSEI 265

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score =  130 bits (328), Expect = 1e-33
 Identities = 70/288 (24%), Positives = 122/288 (42%), Gaps = 39/288 (13%)

Query: 505 FKEELGRGAFGTVYKGFVNM--GSSNHVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNL 561
           F E +GRG FG VY G +    G   H AVK LN +    E  +F  E   +    H N+
Sbjct: 29  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 88

Query: 562 VRLLGYCDEGQN-RLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYLHEE 618
           + LLG C   +   L+V  +M +G + +F+  +   N  ++      + +A G+ YL  +
Sbjct: 89  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKYLASK 147

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV---APEWF 675
                +H D+  +N +LD+ +  +++DFGLA+ +   + ++     G K  V   A E  
Sbjct: 148 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 204

Query: 676 RNMPITVKVDVYSYGVLLLEIICLRR----NIDNEISKVDKAILTDWAYDRYQERTLEAL 731
           +    T K DV+S+GVLL E++        +++     +   +L          R     
Sbjct: 205 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQG-------RR----- 250

Query: 732 VENDLEAMNNV-TMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
               L         L+  VM+  W        RP+  ++   +  +  
Sbjct: 251 ----LLQPEYCPDPLYE-VMLKCW--HPKAEMRPSFSELVSRISAIFS 291

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score =  131 bits (332), Expect = 2e-33
 Identities = 68/288 (23%), Positives = 120/288 (41%), Gaps = 39/288 (13%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSN--HVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNL 561
           F E +GRG FG VY G +        H AVK LN +    E  +F  E   +    H N+
Sbjct: 93  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 152

Query: 562 VRLLGYCDEGQN-RLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYLHEE 618
           + LLG C   +   L+V  +M +G + +F+  +   N  ++      + +A G+ +L  +
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMKFLASK 211

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV---APEWF 675
                +H D+  +N +LD+ +  +++DFGLA+ +   +  +     G K  V   A E  
Sbjct: 212 KF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 268

Query: 676 RNMPITVKVDVYSYGVLLLEIICLRR----NIDNEISKVDKAILTDWAYDRYQERTLEAL 731
           +    T K DV+S+GVLL E++        +++     +   +L          R     
Sbjct: 269 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQG-------RR----- 314

Query: 732 VENDLEA-MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
               L         L+  VM+  W        RP+  ++   +  +  
Sbjct: 315 ----LLQPEYCPDPLYE-VMLKCW--HPKAEMRPSFSELVSRISAIFS 355

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score =  129 bits (326), Expect = 2e-33
 Identities = 68/289 (23%), Positives = 123/289 (42%), Gaps = 41/289 (14%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSN--HVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNL 561
               +G+G FG VY G     + N    A+K L+ + +  +   F  E   +   +H N+
Sbjct: 25  SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84

Query: 562 VRLLGYCDEGQNRLL-VYEFMSNGTVASFLFGDSKPNWKLRTEIAMG--IAGGLFYLHEE 618
           + L+G     +     +  +M +G +  F+    + N  ++  I+ G  +A G+ YL E+
Sbjct: 85  LALIGIMLPPEGLPHVLLPYMCHGDLLQFIR-SPQRNPTVKDLISFGLQVARGMEYLAEQ 143

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV---APEWF 675
                +H D+  +N +LD+ +  +++DFGLA+ +   + ++    R  +  V   A E  
Sbjct: 144 KF---VHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESL 200

Query: 676 RNMPITVKVDVYSYGVLLLEIICLRR----NIDNEISKVDKAILTDWAYDRYQERTLEAL 731
           +    T K DV+S+GVLL E++        +ID                          L
Sbjct: 201 QTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP-------------------FDLTHFL 241

Query: 732 VEND-LEAMNNVT-MLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
            +   L         L++ VM   W  + DP+ RPT R +   +E +V 
Sbjct: 242 AQGRRLPQPEYCPDSLYQ-VMQQCW--EADPAVRPTFRVLVGEVEQIVS 287

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  131 bits (332), Expect = 6e-33
 Identities = 65/291 (22%), Positives = 113/291 (38%), Gaps = 63/291 (21%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKA--EVNGIGQTHHKNL 561
            K+ LG GA GT+   +  M  +  VAVK++    F  +++E +   E +      H N+
Sbjct: 28  PKDVLGHGAEGTIV--YRGMFDNRDVAVKRILPECFSFADREVQLLRESDE-----HPNV 80

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG----IAGGLFYLHE 617
           +R      + Q + +  E  +  T+  ++    + ++       +        GL +LH 
Sbjct: 81  IRYFCTEKDRQFQYIAIELCA-ATLQEYV---EQKDFAHLGLEPITLLQQTTSGLAHLHS 136

Query: 618 ECCTQIIHCDIKPQNILL-----DDHYNARISDFGLAKLLTLDQS--HTNTAIRGTKGYV 670
                I+H D+KP NIL+          A ISDFGL K L + +      + + GT+G++
Sbjct: 137 L---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWI 193

Query: 671 APEWFR---NMPITVKVDVYSYGVLLLEIIC---------LRRNIDNEISKVDKAILTDW 718
           APE          T  VD++S G +   +I          L+R  +  +       L   
Sbjct: 194 APEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPE 253

Query: 719 AYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKV 769
            ++             D+ A          +      I  DP  RP+ + V
Sbjct: 254 KHE-------------DVIARE-------LIE---KMIAMDPQKRPSAKHV 281

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  128 bits (324), Expect = 6e-33
 Identities = 66/309 (21%), Positives = 110/309 (35%), Gaps = 53/309 (17%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           F ++LG G F  V      +   +  A+K++    Q   +E + E +     +H N++RL
Sbjct: 33  FIQKLGEGGFSYVDLV-EGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRL 91

Query: 565 LGYCDEGQNR----LLVYEFMSNGTVASFLFGDSKPNWKLRTE-----IAMGIAGGLFYL 615
           + YC   +       L+  F   GT+ + +         L TE     + +GI  GL  +
Sbjct: 92  VAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFL-TEDQILWLLLGICRGLEAI 150

Query: 616 HEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR--------GTK 667
           H        H D+KP NILL D     + D G      +    +  A+          T 
Sbjct: 151 HA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI 207

Query: 668 GYVAPEWF---RNMPITVKVDVYSYGVLLLEIICLR---RNIDNEISKVDKAILTDW--- 718
            Y APE F    +  I  + DV+S G +L  ++        +  +   V  A+       
Sbjct: 208 SYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIP 267

Query: 719 AYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
              R+                     L + +      +  DP  RP +  +   LE  ++
Sbjct: 268 QSPRHSSA------------------LWQLLN---SMMTVDPHQRPHIPLLLSQLE-ALQ 305

Query: 779 VPIPPCPWT 787
            P P    T
Sbjct: 306 PPAPGQHTT 314

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score =  133 bits (336), Expect = 1e-32
 Identities = 60/199 (30%), Positives = 97/199 (48%), Gaps = 13/199 (6%)

Query: 506 KEELGRGAFGTVYKGFVNMGSSNH-VAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNLVR 563
             ELG G FG+V +G   M      VA+K L    + ++  E   E   + Q  +  +VR
Sbjct: 341 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 400

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYLHEECCT 621
           L+G C + +  +LV E    G +  FL    +    +    E+   ++ G+ YL E+   
Sbjct: 401 LIGVC-QAEALMLVMEMAGGGPLHKFL-VGKREEIPVSNVAELLHQVSMGMKYLEEKNF- 457

Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV---APEWFRNM 678
             +H ++  +N+LL + + A+ISDFGL+K L  D S+  TA    K  +   APE     
Sbjct: 458 --VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYY-TARSAGKWPLKWYAPECINFR 514

Query: 679 PITVKVDVYSYGVLLLEII 697
             + + DV+SYGV + E +
Sbjct: 515 KFSSRSDVWSYGVTMWEAL 533

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score =  133 bits (337), Expect = 1e-32
 Identities = 67/292 (22%), Positives = 114/292 (39%), Gaps = 48/292 (16%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNH--VAVKKLNSVFQDSEK-EFKAEVNGIGQTHHKNL 561
               +G G FG V++G      +    VA+K   +   DS + +F  E   + Q  H ++
Sbjct: 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 453

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM--GIAGGLFYLHEEC 619
           V+L+G   E     ++ E  + G + SFL    K +  L + I     ++  L YL  + 
Sbjct: 454 VKLIGVITE-NPVWIIMELCTLGELRSFL-QVRKFSLDLASLILYAYQLSTALAYLESKR 511

Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD----QSHTNTAIRGTKGYVAPEWF 675
               +H DI  +N+L+  +   ++ DFGL++ +        S     I+      APE  
Sbjct: 512 F---VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM----APESI 564

Query: 676 RNMPITVKVDVYSYGVLLLEIICLRR----NIDNE--ISKVDKAILTDWAYDRYQERTLE 729
                T   DV+ +GV + EI+         + N   I +++             ER   
Sbjct: 565 NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG-----------ER--- 610

Query: 730 ALVENDLEAMNNVT-MLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
                 L    N    L+  +M   W    DPS RP   ++   L  ++E  
Sbjct: 611 ------LPMPPNCPPTLYS-LMTKCW--AYDPSRRPRFTELKAQLSTILEEE 653

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  126 bits (318), Expect = 3e-32
 Identities = 56/194 (28%), Positives = 92/194 (47%), Gaps = 13/194 (6%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYC 568
           LG+G +G VY G  ++ +   +A+K++        +    E+       HKN+V+ LG  
Sbjct: 30  LGKGTYGIVYAGR-DLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG-S 87

Query: 569 DEGQNRLLVY-EFMSNGTVASFL---FGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
                 + ++ E +  G++++ L   +G  K N +        I  GL YLH+    QI+
Sbjct: 88  FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIV 144

Query: 625 HCDIKPQNILLDDHY-NARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPI--T 681
           H DIK  N+L++ +    +ISDFG +K L      T T   GT  Y+APE     P    
Sbjct: 145 HRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET-FTGTLQYMAPEIIDKGPRGYG 203

Query: 682 VKVDVYSYGVLLLE 695
              D++S G  ++E
Sbjct: 204 KAADIWSLGCTIIE 217

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  126 bits (318), Expect = 4e-32
 Identities = 68/298 (22%), Positives = 113/298 (37%), Gaps = 59/298 (19%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
               LG+GAFG V K   N   S + A+KK+    ++      +EV  +   +H+ +VR 
Sbjct: 10  EIAVLGQGAFGQVVKA-RNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRY 67

Query: 565 LG-YCDEGQNRL------------LVYEFMSNGTVASFL-----FGDSKPNWKLRTEIAM 606
              + +                  +  E+  NGT+   +            W+L  +I  
Sbjct: 68  YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILE 127

Query: 607 GIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD----------- 655
            ++    Y+H +    IIH D+KP NI +D+  N +I DFGLAK +              
Sbjct: 128 ALS----YIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180

Query: 656 ---QSHTNTAIRGTKGYVAPEWFRNMPI-TVKVDVYSYGVLLLEIICLRRNIDNEISKVD 711
                +  +AI GT  YVA E          K+D+YS G++  E+I        E   + 
Sbjct: 181 PGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFST-GMERVNIL 238

Query: 712 KAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKV 769
           K +       R          +++        +  + +      I  DP+ RP  R +
Sbjct: 239 KKL-------RSVSIEFPPDFDDNKMK-----VEKKIIR---LLIDHDPNKRPGARTL 281

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score =  126 bits (319), Expect = 5e-32
 Identities = 73/316 (23%), Positives = 128/316 (40%), Gaps = 68/316 (21%)

Query: 505 FKEELGRGAFGTVYKGFVN------MGSSNHVAVKKLNSVFQDSEK-EFKAEVN---GIG 554
             + LG GAFG V               +  VAVK L     + +  +  +E+     IG
Sbjct: 39  LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG 98

Query: 555 QTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTE----------- 603
           +  HKN++ LLG C +     ++ E+ S G +  +L     P  +   +           
Sbjct: 99  K--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156

Query: 604 -----IAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH 658
                    +A G+ YL  + C   IH D+  +N+L+ ++   +I+DFGLA+    D ++
Sbjct: 157 KDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLAR----DINN 209

Query: 659 TNTAIRGTKGYV-----APEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKA 713
            +   + T G +     APE   +   T + DV+S+GVL+ EI  L              
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL-------------- 255

Query: 714 ILTDWAYDRYQERTLEALVE-----NDLEAMNNVT-MLHRFVMVAFWCIQEDPSHRPTMR 767
                    Y    +E L +     + ++   N T  L+  +M   W     PS RPT +
Sbjct: 256 -----GGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM-MMRDCW--HAVPSQRPTFK 307

Query: 768 KVTQMLEGVVEVPIPP 783
           ++ + L+ ++ +    
Sbjct: 308 QLVEDLDRILTLTTNE 323

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score =  125 bits (315), Expect = 6e-32
 Identities = 67/316 (21%), Positives = 113/316 (35%), Gaps = 76/316 (24%)

Query: 500 EVTRG---FKEELGRGAFGTVYKGFVN----MGSSNHVAVKKLNSVFQDSEK-EFKAEVN 551
           E++     F EELG   FG VYKG +        +  VA+K L    +   + EF+ E  
Sbjct: 5   EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAM 64

Query: 552 GIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTE-------- 603
              +  H N+V LLG   + Q   +++ + S+G +  FL   S  +    T+        
Sbjct: 65  LRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSA 124

Query: 604 --------IAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD 655
                   +   IA G+ YL        +H D+  +N+L+ D  N +ISD GL + +   
Sbjct: 125 LEPPDFVHLVAQIAAGMEYLSSHHV---VHKDLATRNVLVYDKLNVKISDLGLFREVY-- 179

Query: 656 QSHTNTAIRGTKGYV-----APEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKV 710
               +         +     APE       ++  D++SYGV+L E+              
Sbjct: 180 --AADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSY----------- 226

Query: 711 DKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRF------------VMVAFWCIQE 758
                       Y   + +       + +  +                  +M+  W   E
Sbjct: 227 --------GLQPYCGYSNQ-------DVVEMIRNRQVLPCPDDCPAWVYALMIECW--NE 269

Query: 759 DPSHRPTMRKVTQMLE 774
            PS RP  + +   L 
Sbjct: 270 FPSRRPRFKDIHSRLR 285

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score =  127 bits (320), Expect = 9e-32
 Identities = 79/313 (25%), Positives = 130/313 (41%), Gaps = 68/313 (21%)

Query: 505 FKEELGRGAFGTVYKGFVN------MGSSNHVAVKKLNSVFQDSEK-EFKAEVN---GIG 554
             + LG GAFG V                  VAVK L S   + +  +  +E+     IG
Sbjct: 73  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 132

Query: 555 QTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFL------------FGDSKPNWKLRT 602
           +  HKN++ LLG C +     ++ E+ S G +  +L                 P  +L +
Sbjct: 133 K--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 190

Query: 603 E----IAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH 658
           +     A  +A G+ YL  + C   IH D+  +N+L+ +    +I+DFGLA+    D  H
Sbjct: 191 KDLVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLAR----DIHH 243

Query: 659 TNTAIRGTKGYV-----APEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKA 713
            +   + T G +     APE   +   T + DV+S+GVLL EI  L              
Sbjct: 244 IDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL-------------- 289

Query: 714 ILTDWAYDRYQERTLEALVE-----NDLEAMNNVT-MLHRFVMVAFWCIQEDPSHRPTMR 767
                    Y    +E L +     + ++  +N T  L+  +M   W     PS RPT +
Sbjct: 290 -----GGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYM-MMRDCW--HAVPSQRPTFK 341

Query: 768 KVTQMLEGVVEVP 780
           ++ + L+ +V + 
Sbjct: 342 QLVEDLDRIVALT 354

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score =  125 bits (317), Expect = 9e-32
 Identities = 67/222 (30%), Positives = 102/222 (45%), Gaps = 36/222 (16%)

Query: 505 FKEELGRGAFGTVYKG----FVNMGSSNHVAVKKLNSVFQDSEK-EFKAEVN---GIGQT 556
           F + LG GAFG V +          +   VAVK L S     EK    +E+     +GQ 
Sbjct: 50  FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ- 108

Query: 557 HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFL--------------FGDSKPNWKLRT 602
            H+N+V LLG C  G   L++ E+   G + +FL                +S  + +   
Sbjct: 109 -HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLL 167

Query: 603 EIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA 662
             +  +A G+ +L  + C   IH D+  +N+LL + + A+I DFGLA+    D  + +  
Sbjct: 168 HFSSQVAQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLAR----DIMNDSNY 220

Query: 663 IRGTKGYV-----APEWFRNMPITVKVDVYSYGVLLLEIICL 699
           I      +     APE   +   TV+ DV+SYG+LL EI  L
Sbjct: 221 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSL 262

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score =  125 bits (315), Expect = 1e-31
 Identities = 69/300 (23%), Positives = 119/300 (39%), Gaps = 55/300 (18%)

Query: 505 FKEELGRGAFGTVYKGFVNM--GSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKN 560
             + LG G FG+V +G +    G+S  VAVK +      Q   +EF +E   +    H N
Sbjct: 38  LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPN 97

Query: 561 LVRLLGYCDEGQNR-----LLVYEFMSNGTVASFL------FGDSKPNWKLRTEIAMGIA 609
           ++RLLG C E  ++     +++  FM  G + ++L       G      +   +  + IA
Sbjct: 98  VIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIA 157

Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGY 669
            G+ YL        +H D+  +N +L D     ++DFGL+K         +   +G    
Sbjct: 158 LGMEYLSNRNF---LHRDLAARNCMLRDDMTVCVADFGLSK----KIYSGDYYRQGRIAK 210

Query: 670 V-----APEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQ 724
           +     A E   +   T K DV+++GV + EI                          Y 
Sbjct: 211 MPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATR-------------------GMTPYP 251

Query: 725 ERTLEALVE-----NDLEAMNNV-TMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
                 + +     + L+   +    L+  +M + W  + DP  RPT   +   LE ++E
Sbjct: 252 GVQNHEMYDYLLHGHRLKQPEDCLDELYE-IMYSCW--RTDPLDRPTFSVLRLQLEKLLE 308

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score =  125 bits (316), Expect = 1e-31
 Identities = 60/303 (19%), Positives = 110/303 (36%), Gaps = 56/303 (18%)

Query: 505 FKEELGRGAFGTVYKGFVN--MGSSNHVAVK--KLNSVFQDSEKEFKAEVNGIGQTHHKN 560
               LG+G FG+V +  +    GS   VAVK  K + +     +EF  E   + +  H +
Sbjct: 27  LGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPH 86

Query: 561 LVRLLGYCDEGQNR------LLVYEFMSNGTVASFL------FGDSKPNWKLRTEIAMGI 608
           + +L+G     + +      +++  FM +G + +FL              +      + I
Sbjct: 87  VAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDI 146

Query: 609 AGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG 668
           A G+ YL        IH D+  +N +L +     ++DFGL++         +   +G   
Sbjct: 147 ACGMEYLSSRNF---IHRDLAARNCMLAEDMTVCVADFGLSR----KIYSGDYYRQGCAS 199

Query: 669 YV-----APEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRY 723
            +     A E   +   TV  DV+++GV + EI+                         Y
Sbjct: 200 KLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTR-------------------GQTPY 240

Query: 724 QERTLEALVE-----NDLEAMNNV-TMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV 777
                  +       N L+        ++  +M   W    DP  RP+   +   LE ++
Sbjct: 241 AGIENAEIYNYLIGGNRLKQPPECMEEVYD-LMYQCW--SADPKQRPSFTCLRMELENIL 297

Query: 778 EVP 780
              
Sbjct: 298 GHL 300

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score =  126 bits (318), Expect = 1e-31
 Identities = 74/319 (23%), Positives = 130/319 (40%), Gaps = 71/319 (22%)

Query: 500 EVTRG---FKEELGRGAFGTVYKGFVN------MGSSNHVAVKKLNSVFQDSEK-EFKAE 549
           E  R      + LG G FG V               +  VAVK L     + +  +  +E
Sbjct: 77  EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSE 136

Query: 550 VN---GIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFL------------FGDS 594
           +     IG+  HKN++ LLG C +     ++ E+ S G +  +L              + 
Sbjct: 137 MEMMKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR 194

Query: 595 KPNWKLRTE----IAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK 650
            P  ++  +        +A G+ YL  + C   IH D+  +N+L+ ++   +I+DFGLA+
Sbjct: 195 VPEEQMTFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLAR 251

Query: 651 LLTLDQSHTNTAIRGTKGYV-----APEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDN 705
               D ++ +   + T G +     APE   +   T + DV+S+GVL+ EI  L      
Sbjct: 252 ----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL------ 301

Query: 706 EISKVDKAILTDWAYDRYQERTLEALVE-----NDLEAMNNVT-MLHRFVMVAFWCIQED 759
                            Y    +E L +     + ++   N T  L+  +M   W     
Sbjct: 302 -------------GGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM-MMRDCW--HAV 345

Query: 760 PSHRPTMRKVTQMLEGVVE 778
           PS RPT +++ + L+ ++ 
Sbjct: 346 PSQRPTFKQLVEDLDRILT 364

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score =  123 bits (311), Expect = 3e-31
 Identities = 73/317 (23%), Positives = 117/317 (36%), Gaps = 79/317 (24%)

Query: 505 FKEELGRGAFGTVYKG----FVNMGSSNHVAVKKLNSVFQDSEK-EFKAEVN---GIGQT 556
           F + LG GAFG V +      +   ++  VAVK L      +E+    +E+     +G  
Sbjct: 27  FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 85

Query: 557 HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFL----------------FGDSKPNWKL 600
            H N+V LLG C  G   L++ E+   G + +FL                  D +    L
Sbjct: 86  -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144

Query: 601 RTEIAMG--IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH 658
              ++    +A G+ +L        IH D+  +NILL      +I DFGLA+    D  +
Sbjct: 145 EDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLAR----DIKN 197

Query: 659 TNTAIRGTKGYV-----APEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKA 713
            +  +      +     APE   N   T + DV+SYG+ L E+  L              
Sbjct: 198 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSL-------------- 243

Query: 714 ILTDWAYDRYQERTLEALVENDLEAMNNVTMLHR------------FVMVAFWCIQEDPS 761
                    Y        +  D +    +    R             +M   W    DP 
Sbjct: 244 -----GSSPYPG------MPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCW--DADPL 290

Query: 762 HRPTMRKVTQMLEGVVE 778
            RPT +++ Q++E  + 
Sbjct: 291 KRPTFKQIVQLIEKQIS 307

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score =  122 bits (309), Expect = 7e-31
 Identities = 66/225 (29%), Positives = 94/225 (41%), Gaps = 39/225 (17%)

Query: 505 FKEELGRGAFGTVYKGFVN----MGSSNHVAVKKLNSVFQDSEK-EFKAEVN---GIGQT 556
             + LGRGAFG V +          +   VAVK L      SE     +E+     IG  
Sbjct: 31  LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH- 89

Query: 557 HHKNLVRLLGYC-DEGQNRLLVYEFMSNGTVASFL--------------FGDSKPNWKLR 601
            H N+V LLG C   G   +++ EF   G ++++L                  K    L 
Sbjct: 90  -HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 148

Query: 602 TEIAMG--IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT 659
             I     +A G+ +L    C   IH D+  +NILL +    +I DFGLA+    D    
Sbjct: 149 HLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLAR----DIYKD 201

Query: 660 NTAIRGTKGYV-----APEWFRNMPITVKVDVYSYGVLLLEIICL 699
              +R     +     APE   +   T++ DV+S+GVLL EI  L
Sbjct: 202 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 246

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  124 bits (313), Expect = 7e-31
 Identities = 56/308 (18%), Positives = 109/308 (35%), Gaps = 39/308 (12%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVR 563
             + LG+GA   V++G  +  + +  A+K  N   F         E   + + +HKN+V+
Sbjct: 13  LSDILGQGATANVFRG-RHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVK 71

Query: 564 LLGYCDEGQNRL--LVYEFMSNGTVASFLFGDSKPNWKLRTE-----IAMGIAGGLFYLH 616
           L    +E   R   L+ EF   G++ + L  +   N     E     +   + GG+ +L 
Sbjct: 72  LFAIEEETTTRHKVLIMEFCPCGSLYTVL--EEPSNAYGLPESEFLIVLRDVVGGMNHLR 129

Query: 617 EECCTQIIHCDIKPQNILL----DDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAP 672
           E     I+H +IKP NI+     D     +++DFG A+ L  D     +   GT+ Y+ P
Sbjct: 130 EN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-DDEQFVSLY-GTEEYLHP 184

Query: 673 E--------WFRNMPITVKVDVYSYGVLLLEIIC---------LRRNIDNEISKVDKAIL 715
           +                  VD++S GV                  R     + K+     
Sbjct: 185 DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244

Query: 716 TDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFW--CIQEDPSHRPTMRKVTQML 773
           +       +          D+    +++   + ++       ++ D        +     
Sbjct: 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304

Query: 774 EGVVEVPI 781
             ++   +
Sbjct: 305 SDILHRMV 312

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score =  123 bits (310), Expect = 9e-31
 Identities = 69/324 (21%), Positives = 121/324 (37%), Gaps = 72/324 (22%)

Query: 500 EVTRG---FKEELGRGAFGTVYKGFVN----MGSSNHVAVKKLNSVFQDSEK-EFKAEVN 551
           E  R    +  ++G GAFG V++              VAVK L        + +F+ E  
Sbjct: 43  EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102

Query: 552 GIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFL--------------------- 590
            + +  + N+V+LLG C  G+   L++E+M+ G +  FL                     
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162

Query: 591 ---FGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFG 647
               G    +   +  IA  +A G+ YL E      +H D+  +N L+ ++   +I+DFG
Sbjct: 163 VSSPGPPPLSCAEQLCIARQVAAGMAYLSERKF---VHRDLATRNCLVGENMVVKIADFG 219

Query: 648 LAKLLTLDQSHTNTAIRGTKGYV-----APEWFRNMPITVKVDVYSYGVLLLEIICLRRN 702
           L++    +    +         +      PE       T + DV++YGV+L EI      
Sbjct: 220 LSR----NIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSY--- 272

Query: 703 IDNEISKVDKAILTDWAYDRYQERTLEALVE-----NDLEAMNNV-TMLHRFVMVAFWCI 756
                               Y     E ++      N L    N    L+  +M   W  
Sbjct: 273 ----------------GLQPYYGMAHEEVIYYVRDGNILACPENCPLELYN-LMRLCW-- 313

Query: 757 QEDPSHRPTMRKVTQMLEGVVEVP 780
            + P+ RP+   + ++L+ + E  
Sbjct: 314 SKLPADRPSFCSIHRILQRMCERA 337

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score =  121 bits (307), Expect = 1e-30
 Identities = 72/314 (22%), Positives = 126/314 (40%), Gaps = 69/314 (21%)

Query: 505 FKEELGRGAFGTVYKG----FVNMGSSNHVAVKKLNSVFQDSEK-EFKAEVNGIGQTHHK 559
             + LG G FG V K              VAVK L      SE  +  +E N + Q +H 
Sbjct: 27  LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86

Query: 560 NLVRLLGYCDEGQNRLLVYEFMSNGTVASFL------------------------FGDSK 595
           ++++L G C +    LL+ E+   G++  FL                          +  
Sbjct: 87  HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146

Query: 596 PNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD 655
                    A  I+ G+ YL E      +H D+  +NIL+ +    +ISDFGL++    D
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKL---VHRDLAARNILVAEGRKMKISDFGLSR----D 199

Query: 656 QSHTNTAIRGTKGYV-----APEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKV 710
               ++ ++ ++G +     A E   +   T + DV+S+GVLL EI+ L           
Sbjct: 200 VYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL----------- 248

Query: 711 DKAILTDWAYDRYQERTLEALVE-----NDLEAMNNVTM-LHRFVMVAFWCIQEDPSHRP 764
                     + Y     E L       + +E  +N +  ++R +M+  W  +++P  RP
Sbjct: 249 --------GGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYR-LMLQCW--KQEPDKRP 297

Query: 765 TMRKVTQMLEGVVE 778
               +++ LE ++ 
Sbjct: 298 VFADISKDLEKMMV 311

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  122 bits (307), Expect = 1e-30
 Identities = 60/277 (21%), Positives = 96/277 (34%), Gaps = 45/277 (16%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS--EKEFKAEVNGIGQ-THHKNLVR 563
             LG G++G V+K   +       AVK+  S F+         AEV    +   H   VR
Sbjct: 63  SRLGHGSYGEVFKVR-SKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVR 121

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFL--FGDSKPN---WKLRTEIAMGIAGGLFYLHEE 618
           L    +EG    L  E     ++      +G S P    W    +  +     L +LH +
Sbjct: 122 LEQAWEEGGILYLQTEL-CGPSLQQHCEAWGASLPEAQVWGYLRDTLLA----LAHLHSQ 176

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               ++H D+KP NI L      ++ DFGL   L            G   Y+APE  +  
Sbjct: 177 ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELG-TAGAGEVQE-GDPRYMAPELLQG- 230

Query: 679 PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA 738
                 DV+S G+ +LE+ C                        +     + L +  L  
Sbjct: 231 SYGTAADVFSLGLTILEVACNMEL-------------------PHGGEGWQQLRQGYLPP 271

Query: 739 MNNVTM---LHRFVMVAFWCIQEDPSHRPTMRKVTQM 772
                +   L   ++     ++ DP  R T   +  +
Sbjct: 272 EFTAGLSSELRSVLV---MMLEPDPKLRATAEALLAL 305

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  122 bits (307), Expect = 1e-30
 Identities = 56/296 (18%), Positives = 106/296 (35%), Gaps = 39/296 (13%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVR 563
             + LG+GA   V++G  +  + +  A+K  N   F         E   + + +HKN+V+
Sbjct: 13  LSDILGQGATANVFRG-RHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVK 71

Query: 564 LLGYCDEGQNRL--LVYEFMSNGTVASFLFGDSKPNWKLRTE-----IAMGIAGGLFYLH 616
           L    +E   R   L+ EF   G++ + L  +   N     E     +   + GG+ +L 
Sbjct: 72  LFAIEEETTTRHKVLIMEFCPCGSLYTVL--EEPSNAYGLPESEFLIVLRDVVGGMNHLR 129

Query: 617 EECCTQIIHCDIKPQNILL----DDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAP 672
           E     I+H +IKP NI+     D     +++DFG A+ L  D     +   GT+ Y+ P
Sbjct: 130 EN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-DDEQFVSLY-GTEEYLHP 184

Query: 673 E--------WFRNMPITVKVDVYSYGVLLLEIIC---------LRRNIDNEISKVDKAIL 715
           +                  VD++S GV                  R     + K+     
Sbjct: 185 DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244

Query: 716 TDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAF--WCIQEDPSHRPTMRKV 769
           +       +          D+    +++   + ++       ++ D        + 
Sbjct: 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQF 300

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  122 bits (308), Expect = 2e-30
 Identities = 40/218 (18%), Positives = 75/218 (34%), Gaps = 30/218 (13%)

Query: 505 FKEELGRGAFGTVYKG----FVNMGSSNHVAVKKLNSVFQDSEKEF---KAEVNGIGQTH 557
               LG GAF  VY+       +  +     +K        +  EF      +  +  + 
Sbjct: 69  VHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQK---PANPWEFYIGTQLMERLKPSM 125

Query: 558 HKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTE-----IAMGIAGGL 612
               ++           +LV E  S GT+ + +        K+  +      AM +   +
Sbjct: 126 QHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMI 185

Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNA-----------RISDFGLAKLLTL-DQSHTN 660
             +H+    +IIH DIKP N +L + +              + D G +  + L  +    
Sbjct: 186 EQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIF 242

Query: 661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC 698
           TA   T G+   E   N P   ++D +     +  ++ 
Sbjct: 243 TAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLF 280

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  121 bits (306), Expect = 2e-30
 Identities = 55/199 (27%), Positives = 86/199 (43%), Gaps = 22/199 (11%)

Query: 506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           +  +GRG+FG V++   +  +    AVKK+    +    E   E+          +V L 
Sbjct: 63  QPRVGRGSFGEVHRMK-DKQTGFQCAVKKVR--LEVFRVE---ELVACAGLSSPRIVPLY 116

Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAG----GLFYLHEECCT 621
           G   EG    +  E +  G++   +    K    L  + A+   G    GL YLH     
Sbjct: 117 GAVREGPWVNIFMELLEGGSLGQLI----KQMGCLPEDRALYYLGQALEGLEYLHTR--- 169

Query: 622 QIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTA----IRGTKGYVAPEWFR 676
           +I+H D+K  N+LL  D   A + DFG A  L  D    +      I GT+ ++APE   
Sbjct: 170 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 229

Query: 677 NMPITVKVDVYSYGVLLLE 695
             P   KVD++S   ++L 
Sbjct: 230 GKPCDAKVDIWSSCCMMLH 248

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score =  121 bits (305), Expect = 3e-30
 Identities = 72/324 (22%), Positives = 113/324 (34%), Gaps = 84/324 (25%)

Query: 505 FKEELGRGAFGTVYKG----FVNMGSSNHVAVKKLNSVFQDSEK-EFKAEVN---GIGQT 556
           F + LG GAFG V           G S  VAVK L      SE+    +E+     +G  
Sbjct: 49  FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGS- 107

Query: 557 HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFL-------------------FGDSKPN 597
            H+N+V LLG C       L++E+   G + ++L                     + +  
Sbjct: 108 -HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 166

Query: 598 WKLRTE----IAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT 653
             L  E     A  +A G+ +L  + C   +H D+  +N+L+      +I DFGLA+   
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLEFKSC---VHRDLAARNVLVTHGKVVKICDFGLAR--- 220

Query: 654 LDQSHTNTAIRGTKGYV-----APEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEIS 708
            D    +  +      +     APE       T+K DV+SYG+LL EI  L         
Sbjct: 221 -DIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSL--------- 270

Query: 709 KVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHR------------FVMVAFWCI 756
                       + Y        +  D      +    +             +M + W  
Sbjct: 271 ----------GVNPYPG------IPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCW-- 312

Query: 757 QEDPSHRPTMRKVTQMLEGVVEVP 780
             D   RP+   +T  L   +   
Sbjct: 313 AFDSRKRPSFPNLTSFLGCQLADA 336

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score =  120 bits (303), Expect = 6e-30
 Identities = 59/217 (27%), Positives = 97/217 (44%), Gaps = 34/217 (15%)

Query: 505 FKEELGRGAFGTVYKGFVN-MGSSNHVAVKKLNSVFQDSEK-EFKAEVNGIGQ-THHKNL 561
           F++ +G G FG V K  +   G     A+K++       +  +F  E+  + +  HH N+
Sbjct: 29  FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 88

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFL----------------FGDSKPNWKLRTEIA 605
           + LLG C+      L  E+  +G +  FL                   S  + +     A
Sbjct: 89  INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148

Query: 606 MGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRG 665
             +A G+ YL ++   Q IH D+  +NIL+ ++Y A+I+DFGL++            ++ 
Sbjct: 149 ADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR-------GQEVYVKK 198

Query: 666 TKGYV-----APEWFRNMPITVKVDVYSYGVLLLEII 697
           T G +     A E       T   DV+SYGVLL EI+
Sbjct: 199 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 235

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  121 bits (306), Expect = 1e-29
 Identities = 74/302 (24%), Positives = 115/302 (38%), Gaps = 64/302 (21%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT-HHKNLVR 563
            ++ LG G+ GTV   F        VAVK++     D       E+  + ++  H N++R
Sbjct: 19  SEKILGYGSSGTVV--FQGSFQGRPVAVKRML---IDFCDIALMEIKLLTESDDHPNVIR 73

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLF------GDSKPNWKLRTE-----IAMGIAGGL 612
                   +   +  E   N      L         S  N KL+ E     +   IA G+
Sbjct: 74  YYCSETTDRFLYIALELC-NLN----LQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 128

Query: 613 FYLHEECCTQIIHCDIKPQNILLD-------------DHYNARISDFGLAKLLTLDQSHT 659
            +LH     +IIH D+KPQNIL+              ++    ISDFGL K L   QS  
Sbjct: 129 AHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSF 185

Query: 660 NTAIR---GTKGYVAPE-------WFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISK 709
            T +    GT G+ APE             +T  +D++S G +   I+   ++   +   
Sbjct: 186 RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 245

Query: 710 VDKAILTDWAYDRYQERTLEALVENDL--EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMR 767
            +  I+       +    ++ L +  L  EA +        +      I  DP  RPT  
Sbjct: 246 RESNIIR----GIFSLDEMKCLHDRSLIAEATD-------LIS---QMIDHDPLKRPTAM 291

Query: 768 KV 769
           KV
Sbjct: 292 KV 293

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  118 bits (297), Expect = 4e-29
 Identities = 56/308 (18%), Positives = 110/308 (35%), Gaps = 53/308 (17%)

Query: 506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQ-THHKNLVRL 564
           +  L  G F  VY+   ++GS    A+K+L S  ++  +    EV  + + + H N+V+ 
Sbjct: 33  RRVLAEGGFAFVYEA-QDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQF 91

Query: 565 LGYC-------DEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTE-----IAMGIAGGL 612
                      D GQ   L+   +  G +  FL      +    +      I       +
Sbjct: 92  CSAASIGKEESDTGQAEFLLLTELCKGQLVEFL--KKMESRGPLSCDTVLKIFYQTCRAV 149

Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAI--------- 663
            ++H      IIH D+K +N+LL +    ++ DFG A  ++    ++ +A          
Sbjct: 150 QHMHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEI 208

Query: 664 --RGTKGYVAPE---WFRNMPITVKVDVYSYGVLLLEIICLRRNIDNE-ISKVDKAILTD 717
               T  Y  PE    + N PI  K D+++ G +L  +   +   ++    ++     + 
Sbjct: 209 TRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGKYSI 268

Query: 718 WAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV 777
             +D                        H  +      +Q +P  R ++ +V   L+ + 
Sbjct: 269 PPHDTQYTV------------------FHSLIR---AMLQVNPEERLSIAEVVHQLQEIA 307

Query: 778 EVPIPPCP 785
                   
Sbjct: 308 AARNVNPK 315

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  122 bits (308), Expect = 4e-29
 Identities = 59/209 (28%), Positives = 87/209 (41%), Gaps = 23/209 (11%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE-FKAEVNGIGQTHHKNLVR 563
            KE LG G FG V +  ++  +   VA+K+         +E +  E+  + + +H N+V 
Sbjct: 18  MKERLGTGGFGYVLRW-IHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVS 76

Query: 564 LL------GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTE-----IAMGIAGGL 612
                            LL  E+   G +  +L  +   N     E     +   I+  L
Sbjct: 77  AREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYL--NQFENCCGLKEGPIRTLLSDISSAL 134

Query: 613 FYLHEECCTQIIHCDIKPQNILLD---DHYNARISDFGLAKLLTLDQSHTNTAIRGTKGY 669
            YLHE    +IIH D+KP+NI+L         +I D G AK L          + GT  Y
Sbjct: 135 RYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD-QGELCTEFV-GTLQY 189

Query: 670 VAPEWFRNMPITVKVDVYSYGVLLLEIIC 698
           +APE       TV VD +S+G L  E I 
Sbjct: 190 LAPELLEQKKYTVTVDYWSFGTLAFECIT 218

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  117 bits (295), Expect = 4e-29
 Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 12/194 (6%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
            ++G G+ G V        S   VAVK ++   Q   +    EV  +    H N+V +  
Sbjct: 51  VKIGEGSTGIVCLA-REKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYK 109

Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM---GIAGGLFYLHEECCTQI 623
               G+   ++ EF+  G +   +            +IA     +   L YLH +    +
Sbjct: 110 SYLVGEELWVLMEFLQGGALTDIV----SQVRLNEEQIATVCEAVLQALAYLHAQ---GV 162

Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVK 683
           IH DIK  +ILL      ++SDFG    ++ D     + + GT  ++APE         +
Sbjct: 163 IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLV-GTPYWMAPEVISRSLYATE 221

Query: 684 VDVYSYGVLLLEII 697
           VD++S G++++E++
Sbjct: 222 VDIWSLGIMVIEMV 235

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  116 bits (293), Expect = 5e-29
 Identities = 54/194 (27%), Positives = 98/194 (50%), Gaps = 12/194 (6%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           E++G+GA GTVY   +++ +   VA++++N   Q  ++    E+  + +  + N+V  L 
Sbjct: 26  EKIGQGASGTVYTA-MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD 84

Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM---GIAGGLFYLHEECCTQI 623
               G    +V E+++ G++   +            +IA         L +LH     Q+
Sbjct: 85  SYLVGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHSN---QV 137

Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVK 683
           IH DIK  NILL    + +++DFG    +T +QS  +T + GT  ++APE         K
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPK 196

Query: 684 VDVYSYGVLLLEII 697
           VD++S G++ +E+I
Sbjct: 197 VDIWSLGIMAIEMI 210

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score =  116 bits (293), Expect = 6e-29
 Identities = 58/195 (29%), Positives = 99/195 (50%), Gaps = 9/195 (4%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE---KEFKAEVNGIGQTHHKNLVR 563
           ++LG G   TVY    +   +  VA+K +    ++ E   K F+ EV+   Q  H+N+V 
Sbjct: 17  DKLGGGGMSTVYLA-EDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           ++   +E     LV E++   T++ ++      +          I  G+ + H+    +I
Sbjct: 76  MIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM---RI 132

Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT-AIRGTKGYVAPEWFRNMPITV 682
           +H DIKPQNIL+D +   +I DFG+AK L+ + S T T  + GT  Y +PE  +      
Sbjct: 133 VHRDIKPQNILIDSNKTLKIFDFGIAKALS-ETSLTQTNHVLGTVQYFSPEQAKGEATDE 191

Query: 683 KVDVYSYGVLLLEII 697
             D+YS G++L E++
Sbjct: 192 CTDIYSIGIVLYEML 206

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  116 bits (292), Expect = 2e-28
 Identities = 52/205 (25%), Positives = 82/205 (40%), Gaps = 25/205 (12%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVK-----KLNSVFQDSEKEFKAEVNGIGQTHHK 559
             E +G+G F  V +  +N  +    AVK     K  S    S ++ K E +      H 
Sbjct: 28  LCEVIGKGPFSVVRRC-INRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHP 86

Query: 560 NLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGD--SKPNWKLR-TE-----IAMGIAGG 611
           ++V LL          +V+EFM        L  +   + +     +E         I   
Sbjct: 87  HIVELLETYSSDGMLYMVFEFMDGAD----LCFEIVKRADAGFVYSEAVASHYMRQILEA 142

Query: 612 LFYLHEECCTQIIHCDIKPQNILL---DDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG 668
           L Y H+     IIH D+KP  +LL   ++    ++  FG+A  L          + GT  
Sbjct: 143 LRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV-GTPH 198

Query: 669 YVAPEWFRNMPITVKVDVYSYGVLL 693
           ++APE  +  P    VDV+  GV+L
Sbjct: 199 FMAPEVVKREPYGKPVDVWGCGVIL 223

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  114 bits (287), Expect = 3e-28
 Identities = 52/289 (17%), Positives = 94/289 (32%), Gaps = 62/289 (21%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQ-THHKNLVR 563
           E++G G FG+V+K  V        A+K+       S  E  A  EV        H ++VR
Sbjct: 17  EKIGSGEFGSVFKC-VKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR 75

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTE-----IAMGIAGGLFYLHEE 618
                 E  + L+  E+ + G++A  +  + +       E     + + +  GL Y+H  
Sbjct: 76  YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYF-KEAELKDLLLQVGRGLRYIHSM 134

Query: 619 CCTQIIHCDIKPQNILLD-------------------DHYNARISDFGLAKLLTLDQSHT 659
               ++H DIKP NI +                    +    +I D G    ++  Q   
Sbjct: 135 ---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEE 191

Query: 660 NTAIRGTKGYVAPE-WFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW 718
                G   ++A E    N     K D+++  + ++                        
Sbjct: 192 -----GDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEP----------------- 229

Query: 719 AYDRYQERTLEALVENDLEAMNNV--TMLHRFVMVAFWCIQEDPSHRPT 765
                 +     + +  L  +  V        +      I  DP  RP+
Sbjct: 230 LPRNGDQ--WHEIRQGRLPRIPQVLSQEFTELLK---VMIHPDPERRPS 273

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  115 bits (289), Expect = 4e-28
 Identities = 57/284 (20%), Positives = 108/284 (38%), Gaps = 48/284 (16%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNH-VAVK--KLNSVFQDSEKEFKAEVNGIGQT---HHKN 560
           +++G G    V++    +       A+K   L      +   ++ E+         H   
Sbjct: 15  KQIGSGGSSKVFQV---LNEKKQIYAIKYVNLEEADNQTLDSYRNEIA-YLNKLQQHSDK 70

Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECC 620
           ++RL  Y    Q   +V E   N  + S+L      +   R      +   +  +H+   
Sbjct: 71  IIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH-- 127

Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN-TAIRGTKGYVAPEWFRNMP 679
             I+H D+KP N L+ D    ++ DFG+A  +  D +     +  GT  Y+ PE  ++M 
Sbjct: 128 -GIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 185

Query: 680 -----------ITVKVDVYSYGVLLLEIICLR---RNIDNEISKVDKAILTDWAYDRYQE 725
                      I+ K DV+S G +L  +   +   + I N+ISK+   I  +   +    
Sbjct: 186 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 245

Query: 726 RTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKV 769
              +     D+        L         C++ DP  R ++ ++
Sbjct: 246 PEKDLQ---DV--------LKC-------CLKRDPKQRISIPEL 271

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  114 bits (288), Expect = 5e-28
 Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 22/198 (11%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
             E+LGRG FG V++  V   S      K +     D     K E++ +    H+N++ L
Sbjct: 9   IAEDLGRGEFGIVHRC-VETSSKKTYMAKFVKVKGTDQV-LVKKEISILNIARHRNILHL 66

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGD--SKPNWKLRTE-----IAMGIAGGLFYLHE 617
               +  +  ++++EF+S       +F +  +   ++L  E         +   L +LH 
Sbjct: 67  HESFESMEELVMIFEFISGLD----IF-ERINTSAFEL-NEREIVSYVHQVCEALQFLHS 120

Query: 618 ECCTQIIHCDIKPQNILLDDHYNA--RISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF 675
                I H DI+P+NI+     ++  +I +FG A+ L    +           Y APE  
Sbjct: 121 H---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLF--TAPEYYAPEVH 175

Query: 676 RNMPITVKVDVYSYGVLL 693
           ++  ++   D++S G L+
Sbjct: 176 QHDVVSTATDMWSLGTLV 193

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  115 bits (291), Expect = 6e-28
 Identities = 63/237 (26%), Positives = 103/237 (43%), Gaps = 26/237 (10%)

Query: 472 RKKFMRPHQEDQGVSYMNLRCFTYKELVEVTRG-------FKEELGRGAFGTVYKGFVNM 524
           R K+  P   D    Y ++      + VEV +G         EELG GAFG V++  V  
Sbjct: 15  RGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRC-VEK 73

Query: 525 GSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNG 584
            +      K +N+ +   +   K E++ + Q HH  L+ L    ++    +L+ EF+S G
Sbjct: 74  ATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGG 133

Query: 585 ------TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH 638
                     +   +++    +R         GL ++HE     I+H DIKP+NI+ +  
Sbjct: 134 ELFDRIAAEDYKMSEAEVINYMRQ-----ACEGLKHMHEH---SIVHLDIKPENIMCETK 185

Query: 639 YNARI--SDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLL 693
             + +   DFGLA  L  D+    T    T  + APE     P+    D+++ GVL 
Sbjct: 186 KASSVKIIDFGLATKLNPDEIVKVTT--ATAEFAAPEIVDREPVGFYTDMWAIGVLG 240

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  113 bits (286), Expect = 7e-28
 Identities = 57/284 (20%), Positives = 108/284 (38%), Gaps = 48/284 (16%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNH-VAVK--KLNSVFQDSEKEFKAEVNGIGQT---HHKN 560
           +++G G    V++    +       A+K   L      +   ++ E+         H   
Sbjct: 34  KQIGSGGSSKVFQV---LNEKKQIYAIKYVNLEEADNQTLDSYRNEIA-YLNKLQQHSDK 89

Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECC 620
           ++RL  Y    Q   +V E   N  + S+L      +   R      +   +  +H+   
Sbjct: 90  IIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH-- 146

Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN-TAIRGTKGYVAPEWFRNMP 679
             I+H D+KP N L+ D    ++ DFG+A  +  D +     +  GT  Y+ PE  ++M 
Sbjct: 147 -GIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMS 204

Query: 680 -----------ITVKVDVYSYGVLLLEIICLR---RNIDNEISKVDKAILTDWAYDRYQE 725
                      I+ K DV+S G +L  +   +   + I N+ISK+   I  +   +    
Sbjct: 205 SSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI 264

Query: 726 RTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKV 769
              +     D+        L         C++ DP  R ++ ++
Sbjct: 265 PEKDLQ---DV--------LKC-------CLKRDPKQRISIPEL 290

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  113 bits (286), Expect = 8e-28
 Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 26/204 (12%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVK-----KLNSVFQDSEKE-FKAEVNGIGQTHH 558
             EELG G F  V K      +    A K     +  +  +   +E  + EV+ + Q  H
Sbjct: 16  IGEELGSGQFAIVKKC-REKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLH 74

Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNG-----TVASFLFGDSKPNWKLRTEIAMGIAGGLF 613
            N++ L    +   + +L+ E +S G             + +    ++      I  G+ 
Sbjct: 75  HNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ-----ILDGVN 129

Query: 614 YLHEECCTQIIHCDIKPQNILL----DDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGY 669
           YLH +   +I H D+KP+NI+L        + ++ DFGLA  +       N    GT  +
Sbjct: 130 YLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF--GTPEF 184

Query: 670 VAPEWFRNMPITVKVDVYSYGVLL 693
           VAPE     P+ ++ D++S GV+ 
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVIT 208

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  114 bits (288), Expect = 1e-27
 Identities = 56/283 (19%), Positives = 110/283 (38%), Gaps = 46/283 (16%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNH-VAVK--KLNSVFQDSEKEFKAEVNGIGQTHHKNL-- 561
           +++G G    V++    +       A+K   L      +   ++ E+  + +    +   
Sbjct: 62  KQIGSGGSSKVFQV---LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKI 118

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           +RL  Y    Q   +V E   N  + S+L      +   R      +   +  +H+    
Sbjct: 119 IRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH--- 174

Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN-TAIRGTKGYVAPEWFRNMP- 679
            I+H D+KP N L+ D    ++ DFG+A  +  D +     +  G   Y+ PE  ++M  
Sbjct: 175 GIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSS 233

Query: 680 ----------ITVKVDVYSYGVLLLEIICLR---RNIDNEISKVDKAILTDWAYDRYQER 726
                     I+ K DV+S G +L  +   +   + I N+ISK+   I  +   +     
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE----- 288

Query: 727 TLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKV 769
               + E DL+           +     C++ DP  R ++ ++
Sbjct: 289 -FPDIPEKDLQ---------DVLK---CCLKRDPKQRISIPEL 318

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  113 bits (284), Expect = 2e-27
 Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 26/202 (12%)

Query: 506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLN--SVFQDSEKEFKAEVNGIGQ-THHKNLV 562
            +ELGRG F  V +  ++  +    A K L      QD   E   E+  +        ++
Sbjct: 34  SKELGRGKFAVVRQC-ISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVI 92

Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFGD---SKPNWKLRTE-----IAMGIAGGLFY 614
            L    +     +L+ E+ + G     +F      +    + +E     +   I  G++Y
Sbjct: 93  NLHEVYENTSEIILILEYAAGGE----IF-SLCLPELAEMV-SENDVIRLIKQILEGVYY 146

Query: 615 LHEECCTQIIHCDIKPQNILL---DDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVA 671
           LH+     I+H D+KPQNILL       + +I DFG+++ +            GT  Y+A
Sbjct: 147 LHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIM--GTPEYLA 201

Query: 672 PEWFRNMPITVKVDVYSYGVLL 693
           PE     PIT   D+++ G++ 
Sbjct: 202 PEILNYDPITTATDMWNIGIIA 223

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  113 bits (285), Expect = 2e-27
 Identities = 51/204 (25%), Positives = 87/204 (42%), Gaps = 26/204 (12%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVK-----KLNSVFQDSEKE-FKAEVNGIGQTHH 558
             EELG G F  V K      +    A K     +  +  +   +E  + EV+ + Q  H
Sbjct: 16  IGEELGSGQFAIVKKC-REKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLH 74

Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNG-----TVASFLFGDSKPNWKLRTEIAMGIAGGLF 613
            N++ L    +   + +L+ E +S G             + +    ++      I  G+ 
Sbjct: 75  PNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQ-----ILDGVN 129

Query: 614 YLHEECCTQIIHCDIKPQNILL----DDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGY 669
           YLH +   +I H D+KP+NI+L        + ++ DFGLA  +       N    GT  +
Sbjct: 130 YLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF--GTPEF 184

Query: 670 VAPEWFRNMPITVKVDVYSYGVLL 693
           VAPE     P+ ++ D++S GV+ 
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVIT 208

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score =  113 bits (284), Expect = 3e-27
 Identities = 53/295 (17%), Positives = 117/295 (39%), Gaps = 36/295 (12%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQTHHKNLVRLL 565
            ELG G  G V+K   +  S   +A K ++   + +   +   E+  + + +   +V   
Sbjct: 39  SELGAGNGGVVFKV-SHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY 97

Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
           G         +  E M  G++   L    +   ++  ++++ +  GL YL E+   +I+H
Sbjct: 98  GAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMH 155

Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
            D+KP NIL++     ++ DFG++  L    +++     GT+ Y++PE  +    +V+ D
Sbjct: 156 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSVQSD 212

Query: 686 VYSYGVLLLEIICLR--------RNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLE 737
           ++S G+ L+E+   R        + ++       +    +                 D  
Sbjct: 213 IWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSR 272

Query: 738 AMNNVTMLHRFV----------------MVAF--WCIQEDPSHRPTMRKVTQMLE 774
               +  L  ++                   F   C+ ++P+ R  ++   Q++ 
Sbjct: 273 PPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLK---QLMV 324

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  113 bits (284), Expect = 3e-27
 Identities = 38/273 (13%), Positives = 78/273 (28%), Gaps = 64/273 (23%)

Query: 473 KKFMRPHQEDQGVSYMNLRCFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAV 532
                  Q  +  S +  R  T        RG    LG+       +   +  +     V
Sbjct: 53  TSLWNTGQPFRVESELGERPRTLV------RG--TVLGQEDPYAYLEA-TDQETGESFEV 103

Query: 533 K---KLNSVFQDSEKEFKAEVNGIGQ-------------------------THHKNLVRL 564
                      ++ K+ K EV  +                              K ++R+
Sbjct: 104 HVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRV 163

Query: 565 LGYCDEGQ--NRLLVYEFMSN------GTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLH 616
                +    +R  +Y  M +        + S            R ++ + +   L  LH
Sbjct: 164 RLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH 223

Query: 617 EECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF- 675
                 ++H  ++P +I+LD      ++ F         +         ++G+  PE   
Sbjct: 224 HYG---LVHTYLRPVDIVLDQRGGVFLTGFEHLV-----RDGARVVSSVSRGFEPPELEA 275

Query: 676 ----------RNMPITVKVDVYSYGVLLLEIIC 698
                     R   +T   D ++ G+++  I C
Sbjct: 276 RRATISYHRDRRTLMTFSFDAWALGLVIYWIWC 308

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  111 bits (279), Expect = 3e-27
 Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 24/203 (11%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVK-----KLNSVFQDSEKE-FKAEVNGIGQTHH 558
             EELG G F  V K     G+    A K     +L+S  +   +E  + EVN + +  H
Sbjct: 9   MGEELGSGQFAIVRKC-RQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRH 67

Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLF----GDSKPNWKLRTEIAMGIAGGLFY 614
            N++ L    +   + +L+ E +S G     LF              T+    I  G+ Y
Sbjct: 68  PNIITLHDIFENKTDVVLILELVSGGE----LFDFLAEKESLTEDEATQFLKQILDGVHY 123

Query: 615 LHEECCTQIIHCDIKPQNILL----DDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV 670
           LH +   +I H D+KP+NI+L      +   ++ DFG+A  +       N    GT  +V
Sbjct: 124 LHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF--GTPEFV 178

Query: 671 APEWFRNMPITVKVDVYSYGVLL 693
           APE     P+ ++ D++S GV+ 
Sbjct: 179 APEIVNYEPLGLEADMWSIGVIT 201

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  111 bits (279), Expect = 3e-27
 Identities = 60/194 (30%), Positives = 86/194 (44%), Gaps = 12/194 (6%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNS---VFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG VY       S   +A+K L          E + + EV       H N++RL 
Sbjct: 17  LGKGKFGNVYLA-REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY 75

Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSK-PNWKLRTEIAMGIAGGLFYLHEECCTQII 624
           GY  +     L+ E+   GTV   L   SK    +  T I   +A  L Y H +   ++I
Sbjct: 76  GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE-LANALSYCHSK---RVI 131

Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKV 684
           H DIKP+N+LL      +I+DFG +      +      + GT  Y+ PE         KV
Sbjct: 132 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTD---LCGTLDYLPPEMIEGRMHDEKV 188

Query: 685 DVYSYGVLLLEIIC 698
           D++S GVL  E + 
Sbjct: 189 DLWSLGVLCYEFLV 202

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  111 bits (279), Expect = 3e-27
 Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 12/194 (6%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNS---VFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G FG VY       +   +A+K L       +  E + + E+       H N++R+ 
Sbjct: 22  LGKGKFGNVYLA-REKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMY 80

Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSK-PNWKLRTEIAMGIAGGLFYLHEECCTQII 624
            Y  + +   L+ EF   G +   L    +    +  T +   +A  L Y HE    ++I
Sbjct: 81  NYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEE-LADALHYCHER---KVI 136

Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKV 684
           H DIKP+N+L+      +I+DFG +      +  T   + GT  Y+ PE         KV
Sbjct: 137 HRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRT---MCGTLDYLPPEMIEGKTHDEKV 193

Query: 685 DVYSYGVLLLEIIC 698
           D++  GVL  E + 
Sbjct: 194 DLWCAGVLCYEFLV 207

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score =  111 bits (279), Expect = 4e-27
 Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 17/200 (8%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
            ELG GAFG VYK   N  +    A K + +  ++  +++  E+  +    H  +V+LLG
Sbjct: 25  GELGDGAFGKVYKA-KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG 83

Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR-TEIAM---GIAGGLFYLHEECCTQ 622
                    ++ EF   G V + +    +    L   +I +    +   L +LH +   +
Sbjct: 84  AYYHDGKLWIMIEFCPGGAVDAIMLELDRG---LTEPQIQVVCRQMLEALNFLHSK---R 137

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE-----WFRN 677
           IIH D+K  N+L+    + R++DFG++          ++ I GT  ++APE       ++
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-GTPYWMAPEVVMCETMKD 196

Query: 678 MPITVKVDVYSYGVLLLEII 697
            P   K D++S G+ L+E+ 
Sbjct: 197 TPYDYKADIWSLGITLIEMA 216

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score =  111 bits (280), Expect = 5e-27
 Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 14/195 (7%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           E+LG G++G+VYK   +  +   VA+K++    +   +E   E++ + Q    ++V+  G
Sbjct: 35  EKLGEGSYGSVYKAI-HKETGQIVAIKQVP--VESDLQEIIKEISIMQQCDSPHVVKYYG 91

Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR-TEIAM---GIAGGLFYLHEECCTQ 622
              +  +  +V E+   G+V+  +   +K    L   EIA        GL YLH     +
Sbjct: 92  SYFKNTDLWIVMEYCGAGSVSDIIRLRNKT---LTEDEIATILQSTLKGLEYLHFM---R 145

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH DIK  NILL+   +A+++DFG+A  LT   +  NT I GT  ++APE  + +    
Sbjct: 146 KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVI-GTPFWMAPEVIQEIGYNC 204

Query: 683 KVDVYSYGVLLLEII 697
             D++S G+  +E+ 
Sbjct: 205 VADIWSLGITAIEMA 219

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  112 bits (283), Expect = 5e-27
 Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 19/198 (9%)

Query: 504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVR 563
              E LG G FG V+K      +   +A K + +     ++E K E++ + Q  H NL++
Sbjct: 92  SKTEILGGGRFGQVHKC-EETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQ 150

Query: 564 LLGYCDEGQNRLLVYEFMSNG------TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           L    +   + +LV E++  G         S+   +      ++      I  G+ ++H+
Sbjct: 151 LYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQ-----ICEGIRHMHQ 205

Query: 618 ECCTQIIHCDIKPQNILLDDHYNARI--SDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF 675
                I+H D+KP+NIL  +    +I   DFGLA+     +        GT  ++APE  
Sbjct: 206 M---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF--GTPEFLAPEVV 260

Query: 676 RNMPITVKVDVYSYGVLL 693
               ++   D++S GV+ 
Sbjct: 261 NYDFVSFPTDMWSVGVIA 278

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  110 bits (278), Expect = 5e-27
 Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 32/210 (15%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN---------SVFQDSEKEFKAEVNGIGQ 555
            KE LGRG    V +  ++  +    AVK ++            Q+  +    EV+ + +
Sbjct: 21  PKEILGRGVSSVVRRC-IHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRK 79

Query: 556 -THHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTE-----IAMGIA 609
            + H N+++L    +      LV++ M  G     LF        L +E     I   + 
Sbjct: 80  VSGHPNIIQLKDTYETNTFFFLVFDLMKKGE----LFDYLTEKVTL-SEKETRKIMRALL 134

Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGY 669
             +  LH+     I+H D+KP+NILLDD  N +++DFG +  L   +        GT  Y
Sbjct: 135 EVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVC--GTPSY 189

Query: 670 VAPEWFRNMPITV------KVDVYSYGVLL 693
           +APE               +VD++S GV++
Sbjct: 190 LAPEIIECSMNDNHPGYGKEVDMWSTGVIM 219

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score =  110 bits (278), Expect = 5e-27
 Identities = 57/195 (29%), Positives = 100/195 (51%), Gaps = 13/195 (6%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           E++G+G+FG V+KG ++  +   VA+K ++    +D  ++ + E+  + Q     + +  
Sbjct: 28  EKIGKGSFGEVFKG-IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 86

Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM---GIAGGLFYLHEECCTQ 622
           G   +     ++ E++  G+    L    +P     T+IA     I  GL YLH E   +
Sbjct: 87  GSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSE---K 139

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH DIK  N+LL +H   +++DFG+A  LT  Q   NT + GT  ++APE  +      
Sbjct: 140 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDS 198

Query: 683 KVDVYSYGVLLLEII 697
           K D++S G+  +E+ 
Sbjct: 199 KADIWSLGITAIELA 213

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  112 bits (280), Expect = 8e-27
 Identities = 33/340 (9%), Positives = 74/340 (21%), Gaps = 68/340 (20%)

Query: 472 RKKFMRPHQEDQGVSYMNLRCFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVA 531
                  + E    S ++      K          E L  G    V+    ++      A
Sbjct: 41  TATVWPQNAETTVDSLLSQGERKLK--------LVEPLRVGDRSVVFLV-RDVERLEDFA 91

Query: 532 VKKLNSVFQDSEKE---FKAEVNGIGQTHHKNLVRLLGYC-------------------- 568
           +K      ++S  E            +   ++                            
Sbjct: 92  LKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQL 151

Query: 569 ------DEGQNRLLVYEFMS------NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLH 616
                     N LL+    S        T+                 +   +      L 
Sbjct: 152 SPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ 211

Query: 617 EECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF- 675
            +    ++H    P N+ +       + D      +         A      Y   E+  
Sbjct: 212 SKG---LVHGHFTPDNLFIMPDGRLMLGDVSALWKV----GTRGPASSVPVTYAPREFLN 264

Query: 676 -RNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEN 734
                 T  ++ +  G+ +  + CL                T      ++  +L     +
Sbjct: 265 ASTATFTHALNAWQLGLSIYRVWCLFLPFGLV---------TPGIKGSWKRPSLRVPGTD 315

Query: 735 DLEAMNNVTM---LHRFVMVAFWCIQEDPSHRPTMRKVTQ 771
            L   +   +   +   +      +  D   R    +  +
Sbjct: 316 SLAFGSCTPLPDFVKTLIG---RFLNFDRRRRLLPLEAME 352

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score =  111 bits (279), Expect = 9e-27
 Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 42/208 (20%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQ-THHKNLVR 563
            KE++G G++    +  ++  ++   AVK    +   S+++   E+  + +   H N++ 
Sbjct: 26  VKEDIGVGSYSVCKRC-IHKATNMEFAVK----IIDKSKRDPTEEIEILLRYGQHPNIIT 80

Query: 564 LLGYCDEGQNRLLVYEFMSNG--------------TVASFLFGDSKPNWKLRTEIAMGIA 609
           L    D+G+   +V E M  G                AS +           T     I 
Sbjct: 81  LKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVL---------FT-----IT 126

Query: 610 GGLFYLHEECCTQIIHCDIKPQNILL----DDHYNARISDFGLAKLLTLDQSHTNTAIRG 665
             + YLH +    ++H D+KP NIL      +  + RI DFG AK L  +     T    
Sbjct: 127 KTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPC-Y 182

Query: 666 TKGYVAPEWFRNMPITVKVDVYSYGVLL 693
           T  +VAPE           D++S GVLL
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLL 210

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  110 bits (277), Expect = 1e-26
 Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 26/204 (12%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVK-----KLNSVFQDSEKE-FKAEVNGIGQTHH 558
             EELG G F  V K      +    A K     +  S  +   +E  + EV+ + +  H
Sbjct: 15  TGEELGSGQFAVVKKC-REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 73

Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNG-----TVASFLFGDSKPNWKLRTEIAMGIAGGLF 613
            N++ L    +   + +L+ E ++ G             + +    L+      I  G++
Sbjct: 74  PNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ-----ILNGVY 128

Query: 614 YLHEECCTQIIHCDIKPQNILL----DDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGY 669
           YLH     QI H D+KP+NI+L          +I DFGLA  +       N    GT  +
Sbjct: 129 YLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF--GTPEF 183

Query: 670 VAPEWFRNMPITVKVDVYSYGVLL 693
           VAPE     P+ ++ D++S GV+ 
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVIT 207

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  108 bits (273), Expect = 2e-26
 Identities = 53/208 (25%), Positives = 89/208 (42%), Gaps = 39/208 (18%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN--SVFQDSEKEFKAEVNGIGQTHHKNLV 562
            KEELG+GAF  V +  V+  +    A K +N   +     ++ + E     +  H N+V
Sbjct: 10  VKEELGKGAFSVVRRC-VHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIV 68

Query: 563 RLLGYCDEGQNRLLVYEFMSNG--------------TVASFLFGDSKPNWKLRTEIAMGI 608
           RL     E     LV++ ++ G                AS            +      I
Sbjct: 69  RLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI---------QQ-----I 114

Query: 609 AGGLFYLHEECCTQIIHCDIKPQNILLDDHYNA---RISDFGLAKLLTLDQSHTNTAIRG 665
              + Y H      I+H ++KP+N+LL         +++DFGLA  +   ++    A  G
Sbjct: 115 LESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA--G 169

Query: 666 TKGYVAPEWFRNMPITVKVDVYSYGVLL 693
           T GY++PE  +  P +  VD+++ GV+L
Sbjct: 170 TPGYLSPEVLKKDPYSKPVDIWACGVIL 197

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  113 bits (283), Expect = 3e-26
 Identities = 55/196 (28%), Positives = 86/196 (43%), Gaps = 17/196 (8%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
             EELG GAFG V++      + N+ A K + +  +  ++  + E+  +    H  LV L
Sbjct: 161 IHEELGTGAFGVVHRV-TERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNL 219

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTE-----IAMGIAGGLFYLHEEC 619
               ++    +++YEFMS G     LF          +E         +  GL ++HE  
Sbjct: 220 HDAFEDDNEMVMIYEFMSGGE----LFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN- 274

Query: 620 CTQIIHCDIKPQNILLDDHYNARI--SDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
               +H D+KP+NI+     +  +   DFGL   L   QS   T   GT  + APE    
Sbjct: 275 --NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT--GTAEFAAPEVAEG 330

Query: 678 MPITVKVDVYSYGVLL 693
            P+    D++S GVL 
Sbjct: 331 KPVGYYTDMWSVGVLS 346

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score =  108 bits (273), Expect = 3e-26
 Identities = 61/269 (22%), Positives = 105/269 (39%), Gaps = 31/269 (11%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE---KEFKAEVNGIGQTHHKNLVR 563
           E LG G    V+    ++     VAVK L +           F+ E       +H  +V 
Sbjct: 18  EILGFGGMSEVHLA-RDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVA 76

Query: 564 LLGY-CDEGQNRLLVY---EFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEEC 619
           +      E     L Y   E++   T+   +  +     K   E+       L + H+  
Sbjct: 77  VYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQ-- 134

Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH-TNT-AIRGTKGYVAPEWFRN 677
              IIH D+KP NI++      ++ DFG+A+ +    +  T T A+ GT  Y++PE  R 
Sbjct: 135 -NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 193

Query: 678 MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERT--LEALVEND 735
             +  + DVYS G +L E++        + S V  ++    AY   +E      A  E  
Sbjct: 194 DSVDARSDVYSLGCVLYEVLTGEPPFTGD-SPV--SV----AYQHVREDPIPPSARHEGL 246

Query: 736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRP 764
              ++ V +           + ++P +R 
Sbjct: 247 SADLDAVVL---------KALAKNPENRY 266

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score =  108 bits (273), Expect = 4e-26
 Identities = 45/194 (23%), Positives = 73/194 (37%), Gaps = 11/194 (5%)

Query: 507 EELGRGAFGTVYKGF-VNMGSSNHVAVKKLNSVFQDSE---KEFKAEVNGIGQTHHKNLV 562
             +GRG  G VY+           VA+K ++             + E    G+    ++V
Sbjct: 40  RLVGRGGMGDVYEAEDTVRE--RIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVV 97

Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
            +  + +      +    ++   +A+ L             I   I   L   H      
Sbjct: 98  PIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAA---G 154

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT-AIRGTKGYVAPEWFRNMPIT 681
             H D+KP+NIL+     A + DFG+A   T D+  T      GT  Y+APE F     T
Sbjct: 155 ATHRDVKPENILVSADDFAYLVDFGIASATT-DEKLTQLGNTVGTLYYMAPERFSESHAT 213

Query: 682 VKVDVYSYGVLLLE 695
            + D+Y+   +L E
Sbjct: 214 YRADIYALTCVLYE 227

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  110 bits (277), Expect = 7e-26
 Identities = 49/208 (23%), Positives = 86/208 (41%), Gaps = 38/208 (18%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN--SVFQDSEKEFKAEVNGIGQTHHKNLV 562
             EELG+GAF  V +  V + +    A   +N   +     ++ + E        H N+V
Sbjct: 15  LFEELGKGAFSVVRRC-VKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIV 73

Query: 563 RLLGYCDEGQNRLLVYEFMSNG--------------TVASFLFGDSKPNWKLRTEIAMGI 608
           RL     E  +  L+++ ++ G                AS            +      I
Sbjct: 74  RLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCI---------QQ-----I 119

Query: 609 AGGLFYLHEECCTQIIHCDIKPQNILL---DDHYNARISDFGLAKLLTLDQSHTNTAIRG 665
              + + H+     ++H ++KP+N+LL         +++DFGLA  +  +Q        G
Sbjct: 120 LEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA-G 175

Query: 666 TKGYVAPEWFRNMPITVKVDVYSYGVLL 693
           T GY++PE  R  P    VD+++ GV+L
Sbjct: 176 TPGYLSPEVLRKDPYGKPVDLWACGVIL 203

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score =  108 bits (271), Expect = 7e-26
 Identities = 57/201 (28%), Positives = 92/201 (45%), Gaps = 17/201 (8%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE-KEFKAEVN-GIGQTHHKNLVRL 564
            E+GRGA+G+V K  V+  S   +AVK++ S   + E K+   +++  +  +    +V+ 
Sbjct: 28  GEIGRGAYGSVNKM-VHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQF 86

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTE-----IAMGIAGGLFYLHEEC 619
            G      +  +  E M + +   F          +  E     I +     L +L E  
Sbjct: 87  YGALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN- 144

Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE----WF 675
             +IIH DIKP NILLD   N ++ DFG++  L    + T  A  G + Y+APE      
Sbjct: 145 -LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDA--GCRPYMAPERIDPSA 201

Query: 676 RNMPITVKVDVYSYGVLLLEI 696
                 V+ DV+S G+ L E+
Sbjct: 202 SRQGYDVRSDVWSLGITLYEL 222

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score =  107 bits (270), Expect = 8e-26
 Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 38/206 (18%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           F E LG GAF  V+       +    A+K +       +   + E+  + +  H+N+V L
Sbjct: 13  FMEVLGSGAFSEVFLV-KQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTL 71

Query: 565 LGYCDEGQNRLLVYEFMSNG--------------TVASFLFGDSKPNWKLRTEIAMGIAG 610
               +   +  LV + +S G                AS +          +      +  
Sbjct: 72  EDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVI---------QQ-----VLS 117

Query: 611 GLFYLHEECCTQIIHCDIKPQNILL---DDHYNARISDFGLAKLLTLDQSHTNTAIRGTK 667
            + YLHE     I+H D+KP+N+L    +++    I+DFGL+K+        +TA  GT 
Sbjct: 118 AVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKME--QNGIMSTAC-GTP 171

Query: 668 GYVAPEWFRNMPITVKVDVYSYGVLL 693
           GYVAPE     P +  VD +S GV+ 
Sbjct: 172 GYVAPEVLAQKPYSKAVDCWSIGVIT 197

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  108 bits (272), Expect = 1e-25
 Identities = 53/208 (25%), Positives = 89/208 (42%), Gaps = 39/208 (18%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN--SVFQDSEKEFKAEVNGIGQTHHKNLV 562
            KEELG+GAF  V +  V+  +    A K +N   +     ++ + E     +  H N+V
Sbjct: 33  VKEELGKGAFSVVRRC-VHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIV 91

Query: 563 RLLGYCDEGQNRLLVYEFMSNG--------------TVASFLFGDSKPNWKLRTEIAMGI 608
           RL     E     LV++ ++ G                AS            +      I
Sbjct: 92  RLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI---------QQ-----I 137

Query: 609 AGGLFYLHEECCTQIIHCDIKPQNILL---DDHYNARISDFGLAKLLTLDQSHTNTAIRG 665
              + Y H      I+H ++KP+N+LL         +++DFGLA  +   ++    A  G
Sbjct: 138 LESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFA--G 192

Query: 666 TKGYVAPEWFRNMPITVKVDVYSYGVLL 693
           T GY++PE  +  P +  VD+++ GV+L
Sbjct: 193 TPGYLSPEVLKKDPYSKPVDIWACGVIL 220

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =  108 bits (271), Expect = 1e-25
 Identities = 55/246 (22%), Positives = 87/246 (35%), Gaps = 56/246 (22%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVK-----KLNSVFQDSEKEFKAEVNGIGQTHHK 559
            K  +G+G++G V    +   +    A+K     K+  +     +  K EV  + + HH 
Sbjct: 30  LKGAIGQGSYGVVRVA-IENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHP 88

Query: 560 NLVRLLGYCDEGQNRLLVYEFMSNG----------------------------------- 584
           N+ RL    ++ Q   LV E    G                                   
Sbjct: 89  NIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEE 148

Query: 585 TVASFLFGDSKPNWKLRTE-----IAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY 639
            +   + G  +    ++ E     I   I   L YLH +    I H DIKP+N L   + 
Sbjct: 149 AINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNK 205

Query: 640 NAR--ISDFGLAKLLTLDQSHTNTAIR---GTKGYVAPEWFRNM--PITVKVDVYSYGVL 692
           +    + DFGL+K      +     +    GT  +VAPE           K D +S GVL
Sbjct: 206 SFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVL 265

Query: 693 LLEIIC 698
           L  ++ 
Sbjct: 266 LHLLLM 271

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  106 bits (266), Expect = 1e-25
 Identities = 53/198 (26%), Positives = 86/198 (43%), Gaps = 17/198 (8%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVK---KLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G+F  VY+   ++ +   VA+K   K         +  + EV    Q  H +++ L 
Sbjct: 19  LGKGSFAGVYRA-ESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77

Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIA-----MGIAGGLFYLHEECC 620
            Y ++     LV E   NG     +    K   K  +E         I  G+ YLH    
Sbjct: 78  NYFEDSNYVYLVLEMCHNGE----MNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH-- 131

Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPI 680
             I+H D+   N+LL  + N +I+DFGLA  L +      T + GT  Y++PE       
Sbjct: 132 -GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT-LCGTPNYISPEIATRSAH 189

Query: 681 TVKVDVYSYGVLLLEIIC 698
            ++ DV+S G +   ++ 
Sbjct: 190 GLESDVWSLGCMFYTLLI 207

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  110 bits (276), Expect = 2e-25
 Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 23/205 (11%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVK---KLNSVFQDSEKEFKAEVNGIGQTHHKNL 561
            +  LG+G+FG V     +  +    AVK   K     +  ++    EV  + Q  H N+
Sbjct: 30  GQRVLGKGSFGEVILC-KDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNI 88

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTE-----IAMGIAGGLFYLH 616
           ++L  + ++     LV E  + G     LF D   + K  +E     I   +  G+ Y+H
Sbjct: 89  MKLYEFFEDKGYFYLVGEVYTGGE----LF-DEIISRKRFSEVDAARIIRQVLSGITYMH 143

Query: 617 EECCTQIIHCDIKPQNILL---DDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE 673
           +    +I+H D+KP+N+LL       N RI DFGL+      +   +    GT  Y+APE
Sbjct: 144 KN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI--GTAYYIAPE 198

Query: 674 WFRNMPITVKVDVYSYGVLLLEIIC 698
                    K DV+S GV+L  ++ 
Sbjct: 199 VLHG-TYDEKCDVWSTGVILYILLS 222

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score =  107 bits (268), Expect = 2e-25
 Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 24/207 (11%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT-HHKNLVRLL 565
           E +G G +G VYKG  ++ +    A+K ++ V  D E+E K E+N + +  HH+N+    
Sbjct: 30  ELVGNGTYGQVYKG-RHVKTGQLAAIKVMD-VTGDEEEEIKQEINMLKKYSHHRNIATYY 87

Query: 566 G-----YCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLR-TEIAM---GIAGGLFYL 615
           G           ++L LV EF   G+V   +   +     L+   IA     I  GL +L
Sbjct: 88  GAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI--KNTKGNTLKEEWIAYICREILRGLSHL 145

Query: 616 HEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE-- 673
           H+    ++IH DIK QN+LL ++   ++ DFG++  L       NT I GT  ++APE  
Sbjct: 146 HQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAPEVI 201

Query: 674 ---WFRNMPITVKVDVYSYGVLLLEII 697
                 +     K D++S G+  +E+ 
Sbjct: 202 ACDENPDATYDFKSDLWSLGITAIEMA 228

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  106 bits (267), Expect = 2e-25
 Identities = 46/197 (23%), Positives = 81/197 (41%), Gaps = 16/197 (8%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVK---KLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G F   ++   +  +    A K   K   +     ++   E++      H+++V   
Sbjct: 23  LGKGGFAKCFEI-SDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81

Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIA----MGIAGGLFYLHEECCT 621
           G+ ++     +V E     +    L    K    L    A      I  G  YLH     
Sbjct: 82  GFFEDNDFVFVVLELCRRRS----LLELHKRRKALTEPEARYYLRQIVLGCQYLHRN--- 134

Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT 681
           ++IH D+K  N+ L++    +I DFGLA  +  D       + GT  Y+APE       +
Sbjct: 135 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHS 193

Query: 682 VKVDVYSYGVLLLEIIC 698
            +VDV+S G ++  ++ 
Sbjct: 194 FEVDVWSIGCIMYTLLV 210

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  107 bits (269), Expect = 2e-25
 Identities = 45/197 (22%), Positives = 81/197 (41%), Gaps = 16/197 (8%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVK---KLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           LG+G F   ++   +  +    A K   K   +     ++   E++      H+++V   
Sbjct: 49  LGKGGFAKCFEI-SDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107

Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIA----MGIAGGLFYLHEECCT 621
           G+ ++     +V E     ++        K    L    A      I  G  YLH     
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELH----KRRKALTEPEARYYLRQIVLGCQYLHRN--- 160

Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT 681
           ++IH D+K  N+ L++    +I DFGLA  +  D       + GT  Y+APE       +
Sbjct: 161 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHS 219

Query: 682 VKVDVYSYGVLLLEIIC 698
            +VDV+S G ++  ++ 
Sbjct: 220 FEVDVWSIGCIMYTLLV 236

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score =  106 bits (267), Expect = 2e-25
 Identities = 42/275 (15%), Positives = 82/275 (29%), Gaps = 45/275 (16%)

Query: 511 RGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDE 570
             A+                   +       S     A    I +    +    +G    
Sbjct: 70  FNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQP 129

Query: 571 GQNRLLVY---EFMSNGTVASFL---FGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
              ++ +Y   +      +  ++            +   I + IA  + +LH +    ++
Sbjct: 130 SSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK---GLM 186

Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR-----------GTKGYVAPE 673
           H D+KP NI        ++ DFGL   +  D+                   GTK Y++PE
Sbjct: 187 HRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPE 246

Query: 674 WFRNMPITVKVDVYSYGVLLLEIICLRR---NIDNEISKVDKAILTDWAYDRYQERTLEA 730
                  + KVD++S G++L E++            I+ V           +Y +     
Sbjct: 247 QIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKFPLLFTQKYPQ--EHM 304

Query: 731 LVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPT 765
           +V+                      +   P+ RP 
Sbjct: 305 MVQ--------------------DMLSPSPTERPE 319

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  107 bits (269), Expect = 2e-25
 Identities = 49/219 (22%), Positives = 88/219 (40%), Gaps = 51/219 (23%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN--------SVFQDSEKEFKAEVNGIGQ- 555
            K+ +GRG    V +  V+  + +  AVK +            ++  +  + E + I + 
Sbjct: 98  PKDVIGRGVSSVVRRC-VHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETH-ILRQ 155

Query: 556 -THHKNLVRLLGYCDEGQNRLLVYEFMSNG--------------TVASFLFGDSKPNWKL 600
              H +++ L+   +      LV++ M  G                   +          
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIM--------- 206

Query: 601 RTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN 660
           R+     +   + +LH      I+H D+KP+NILLDD+   R+SDFG +  L   +    
Sbjct: 207 RS-----LLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRE 258

Query: 661 TAIRGTKGYVAPEWFRNMPITV------KVDVYSYGVLL 693
               GT GY+APE  +            +VD+++ GV+L
Sbjct: 259 LC--GTPGYLAPEILKCSMDETHPGYGKEVDLWACGVIL 295

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  108 bits (272), Expect = 3e-25
 Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 33/214 (15%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN--------SVFQDSEKEFKAEVNGIGQT 556
             + LG GA G V        +   VA++ ++        +   D     + E+  + + 
Sbjct: 139 MSKTLGSGACGEVKLA-FERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL 197

Query: 557 HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTE-----IAMGIAGG 611
           +H  ++++  + D  ++  +V E M  G     LF     N +L  E         +   
Sbjct: 198 NHPCIIKIKNFFDA-EDYYIVLELMEGGE----LFDKVVGNKRL-KEATCKLYFYQMLLA 251

Query: 612 LFYLHEECCTQIIHCDIKPQNILL---DDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG 668
           + YLHE     IIH D+KP+N+LL   ++    +I+DFG +K+L  + S   T   GT  
Sbjct: 252 VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLC-GTPT 306

Query: 669 YVAPEWFRNM---PITVKVDVYSYGVLLLEIICL 699
           Y+APE   ++        VD +S GV+L   ICL
Sbjct: 307 YLAPEVLVSVGTAGYNRAVDCWSLGVILF--ICL 338

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  109 bits (273), Expect = 3e-25
 Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 22/204 (10%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN--SVFQDSEKEFKAEVNGIGQTHHKNLV 562
             ++LG GA+G V     +  +    A+K +   SV   S  +   EV  +    H N++
Sbjct: 41  RVKKLGSGAYGEVLLC-RDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIM 99

Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTE-----IAMGIAGGLFYLHE 617
           +L  + ++ +N  LV E    G     LF D   +     E     I   +  G+ YLH+
Sbjct: 100 KLYDFFEDKRNYYLVMECYKGGE----LF-DEIIHRMKFNEVDAAVIIKQVLSGVTYLHK 154

Query: 618 ECCTQIIHCDIKPQNILL---DDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEW 674
                I+H D+KP+N+LL   +     +I DFGL+ +    +        GT  Y+APE 
Sbjct: 155 H---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERL--GTAYYIAPEV 209

Query: 675 FRNMPITVKVDVYSYGVLLLEIIC 698
            R      K DV+S GV+L  ++ 
Sbjct: 210 LRK-KYDEKCDVWSIGVILFILLA 232

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  105 bits (263), Expect = 4e-25
 Identities = 59/201 (29%), Positives = 95/201 (47%), Gaps = 23/201 (11%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVR 563
           FK +LG GAFG V+       S     +K +N    Q   ++ +AE+  +    H N+++
Sbjct: 26  FKRKLGSGAFGDVHLV-EERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIK 84

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLF---GDSKPNWKLRTE-----IAMGIAGGLFYL 615
           +    ++  N  +V E    G     L      ++   K  +E     +   +   L Y 
Sbjct: 85  IFEVFEDYHNMYIVMETCEGGE----LLERIVSAQARGKALSEGYVAELMKQMMNALAYF 140

Query: 616 HEECCTQIIHCDIKPQNILL---DDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAP 672
           H +    ++H D+KP+NIL      H   +I DFGLA+L   D+  TN A  GT  Y+AP
Sbjct: 141 HSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAA--GTALYMAP 195

Query: 673 EWFRNMPITVKVDVYSYGVLL 693
           E F+   +T K D++S GV++
Sbjct: 196 EVFKR-DVTFKCDIWSAGVVM 215

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score =  105 bits (263), Expect = 5e-25
 Identities = 62/284 (21%), Positives = 113/284 (39%), Gaps = 46/284 (16%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE-KEFKAEVN-GIGQTHHKNLVRL 564
            ELGRGA+G V K   ++ S   +AVK++ +     E K    +++  +        V  
Sbjct: 13  MELGRGAYGVVEKM-RHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTF 71

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTE----IAMGIAGGLFYLHEECC 620
            G      +  +  E M + ++  F          +  +    IA+ I   L +LH +  
Sbjct: 72  YGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK-- 128

Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE----WFR 676
             +IH D+KP N+L++     ++ DFG++  L  D    +    G K Y+APE       
Sbjct: 129 LSVIHRDVKPSNVLINALGQVKMCDFGISGYLV-DDVAKDIDA-GCKPYMAPERINPELN 186

Query: 677 NMPITVKVDVYSYGVLLLEIICLR---RNIDNEISKVDKAILTDWAYDRYQERTLEALVE 733
               +VK D++S G+ ++E+  LR    +                       + L+ +VE
Sbjct: 187 QKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF------------------QQLKQVVE 228

Query: 734 ND---LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
                L A         F      C++++   RPT     ++++
Sbjct: 229 EPSPQLPADKFSAEFVDFTSQ---CLKKNSKERPT---YPELMQ 266

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  104 bits (262), Expect = 5e-25
 Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 20/198 (10%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN--SVFQDSEKEFKAEVNGIGQTHHKNLV 562
               LG+G+FG V K   +  +    AVK +N  S           EV  + +  H N++
Sbjct: 26  IVCMLGKGSFGEVLKC-KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIM 84

Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFGD--SKPNWKLRT--EIAMGIAGGLFYLHEE 618
           +L    ++  +  +V E  + G     LF +   +  +       I   +  G+ Y+H+ 
Sbjct: 85  KLFEILEDSSSFYIVGELYTGGE----LFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH 140

Query: 619 CCTQIIHCDIKPQNILL---DDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF 675
               I+H D+KP+NILL   +   + +I DFGL+     +    +    GT  Y+APE  
Sbjct: 141 ---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI--GTAYYIAPEVL 195

Query: 676 RNMPITVKVDVYSYGVLL 693
           R      K DV+S GV+L
Sbjct: 196 RG-TYDEKCDVWSAGVIL 212

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  105 bits (264), Expect = 6e-25
 Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 31/213 (14%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN--------SVFQDSEKEFKAEVNGIGQT 556
             + LG GA G V        +   VA+K ++        +   D     + E+  + + 
Sbjct: 14  MSKTLGSGACGEVKLA-FERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL 72

Query: 557 HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG----IAGGL 612
           +H  ++++  + D  ++  +V E M  G     LF     N +L+          +   +
Sbjct: 73  NHPCIIKIKNFFDA-EDYYIVLELMEGGE----LFDKVVGNKRLKEATCKLYFYQMLLAV 127

Query: 613 FYLHEECCTQIIHCDIKPQNILL---DDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGY 669
            YLHE     IIH D+KP+N+LL   ++    +I+DFG +K+L  + S   T   GT  Y
Sbjct: 128 QYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ETSLMRTLC-GTPTY 182

Query: 670 VAPEWFRNM---PITVKVDVYSYGVLLLEIICL 699
           +APE   ++        VD +S GV+L   ICL
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILF--ICL 213

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score =  105 bits (263), Expect = 9e-25
 Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 26/199 (13%)

Query: 506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQ-THHKNLVRL 564
            + LG G+F    K  V+  S+   AVK    + +  E   + E+  +     H N+V+L
Sbjct: 16  DKPLGEGSFSICRKC-VHKKSNQAFAVK---IISKRMEANTQKEITALKLCEGHPNIVKL 71

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGD--SKPNWKLRTE-----IAMGIAGGLFYLHE 617
                +  +  LV E ++ G     LF     K ++   +E     I   +   + ++H+
Sbjct: 72  HEVFHDQLHTFLVMELLNGGE----LFERIKKKKHF---SETEASYIMRKLVSAVSHMHD 124

Query: 618 ECCTQIIHCDIKPQNILL---DDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEW 674
                ++H D+KP+N+L    +D+   +I DFG A+L   D     T    T  Y APE 
Sbjct: 125 V---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC-FTLHYAAPEL 180

Query: 675 FRNMPITVKVDVYSYGVLL 693
                     D++S GV+L
Sbjct: 181 LNQNGYDESCDLWSLGVIL 199

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  103 bits (260), Expect = 1e-24
 Identities = 48/197 (24%), Positives = 82/197 (41%), Gaps = 20/197 (10%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            +  +GRG++G V    V  G+    A KK+   F +    FK E+  +    H N++RL
Sbjct: 13  LENTIGRGSWGEVKIA-VQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRL 71

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTE-----IAMGIAGGLFYLHEEC 619
               ++  +  LV E  + G     LF +   + ++  E     I   +   + Y H+  
Sbjct: 72  YETFEDNTDIYLVMELCTGGE----LF-ERVVHKRVFRESDAARIMKDVLSAVAYCHKL- 125

Query: 620 CTQIIHCDIKPQNILL---DDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR 676
              + H D+KP+N L          ++ DFGLA      +        GT  YV+P+   
Sbjct: 126 --NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV--GTPYYVSPQVLE 181

Query: 677 NMPITVKVDVYSYGVLL 693
                 + D +S GV++
Sbjct: 182 G-LYGPECDEWSAGVMM 197

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  105 bits (263), Expect = 1e-24
 Identities = 46/221 (20%), Positives = 81/221 (36%), Gaps = 43/221 (19%)

Query: 509 LGRGAFGTVY----KGFVNMGSSNHVAVKKLN-----------------SVFQDSEKEFK 547
           L +G F  +                 A+KK                      +    +FK
Sbjct: 39  LNQGKFNKIILCEKDNK-------FYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFK 91

Query: 548 AEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFL----FGDSKPNWKLRTE 603
            E+  I    ++  +   G         ++YE+M N ++  F       D      +  +
Sbjct: 92  NELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQ 151

Query: 604 IAM----GIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT 659
           +       +     Y+H E    I H D+KP NIL+D +   ++SDFG ++ +   +   
Sbjct: 152 VIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKG 209

Query: 660 NTAIRGTKGYVAPEWFRNMPITV--KVDVYSYGVLLLEIIC 698
               RGT  ++ PE+F N       KVD++S G+ L  +  
Sbjct: 210 ---SRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFY 247

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  107 bits (268), Expect = 1e-24
 Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 22/204 (10%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN--SVFQDSEKEFKAEVNGIGQTHHKNLV 562
               LG+G+FG V K   +  +    AVK +N  S           EV  + +  H N++
Sbjct: 26  IVCMLGKGSFGEVLKC-KDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIM 84

Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTE-----IAMGIAGGLFYLHE 617
           +L    ++  +  +V E  + G     LF D     K  +E     I   +  G+ Y+H+
Sbjct: 85  KLFEILEDSSSFYIVGELYTGGE----LF-DEIIKRKRFSEHDAARIIKQVFSGITYMHK 139

Query: 618 ECCTQIIHCDIKPQNILL---DDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEW 674
                I+H D+KP+NILL   +   + +I DFGL+     +    +    GT  Y+APE 
Sbjct: 140 H---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI--GTAYYIAPEV 194

Query: 675 FRNMPITVKVDVYSYGVLLLEIIC 698
            R      K DV+S GV+L  ++ 
Sbjct: 195 LRG-TYDEKCDVWSAGVILYILLS 217

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score =  107 bits (269), Expect = 1e-24
 Identities = 69/223 (30%), Positives = 104/223 (46%), Gaps = 21/223 (9%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKLN--SVFQDSEKEF-KAEVNGIGQTHHKNLVRL 564
           LGRG FG V+     M ++  + A KKLN   + +    +    E   + + H + +V L
Sbjct: 193 LGRGGFGEVFA--CQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250

Query: 565 LGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAM----GIAGGLFYLHEEC 619
             Y  E +  L LV   M+ G +   ++   + N   +   A+     I  GL +LH+  
Sbjct: 251 A-YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR- 308

Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP 679
              II+ D+KP+N+LLDD  N RISD GLA  L   Q+ T     GT G++APE      
Sbjct: 309 --NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-GTPGFMAPELLLGEE 365

Query: 680 ITVKVDVYSYGVLLLEIICLR-----RNIDNEISKVDKAILTD 717
               VD ++ GV L E+I  R     R    E  ++ + +L  
Sbjct: 366 YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ 408

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score =  104 bits (262), Expect = 2e-24
 Identities = 55/199 (27%), Positives = 87/199 (43%), Gaps = 25/199 (12%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            + ELGRGA   VY+     G+    A+K L       +K  + E+  + +  H N+++L
Sbjct: 57  VESELGRGATSIVYRC-KQKGTQKPYALKVLKK--TVDKKIVRTEIGVLLRLSHPNIIKL 113

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGD--SKPNWKLRTE-----IAMGIAGGLFYLHE 617
               +      LV E ++ G     LF     K  +   +E         I   + YLHE
Sbjct: 114 KEIFETPTEISLVLELVTGGE----LFDRIVEKGYY---SERDAADAVKQILEAVAYLHE 166

Query: 618 ECCTQIIHCDIKPQNILL---DDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEW 674
                I+H D+KP+N+L          +I+DFGL+K++            GT GY APE 
Sbjct: 167 N---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVC--GTPGYCAPEI 221

Query: 675 FRNMPITVKVDVYSYGVLL 693
            R      +VD++S G++ 
Sbjct: 222 LRGCAYGPEVDMWSVGIIT 240

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  106 bits (266), Expect = 3e-24
 Identities = 58/215 (26%), Positives = 91/215 (42%), Gaps = 33/215 (15%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN-------------SVFQDSEKEFKAEVN 551
              +LG GA+G V          +  A+K +                 +   +E   E++
Sbjct: 40  KVRKLGSGAYGEVLLC-KEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEIS 98

Query: 552 GIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTE-----IAM 606
            +    H N+++L    ++ +   LV EF   G     LF +   N     E     I  
Sbjct: 99  LLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGE----LF-EQIINRHKFDECDAANIMK 153

Query: 607 GIAGGLFYLHEECCTQIIHCDIKPQNILL---DDHYNARISDFGLAKLLTLDQSHTNTAI 663
            I  G+ YLH+     I+H DIKP+NILL   +   N +I DFGL+   + D    +   
Sbjct: 154 QILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL- 209

Query: 664 RGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC 698
            GT  Y+APE  +      K DV+S GV++  ++C
Sbjct: 210 -GTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLC 242

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score =  106 bits (266), Expect = 6e-24
 Identities = 39/201 (19%), Positives = 73/201 (36%), Gaps = 18/201 (8%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE-FKAEVNGIGQTHHKNLVRLL 565
             +  G  G +Y       +   V +K L        +    AE   + +  H ++V++ 
Sbjct: 86  GCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIF 145

Query: 566 GYCDEGQNRL-----LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECC 620
            + +           +V E++   ++             +     + I   L YLH    
Sbjct: 146 NFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIA--YLLEILPALSYLHSI-- 201

Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPI 680
             +++ D+KP+NI+L +    ++ D G    +            GT G+ APE  R  P 
Sbjct: 202 -GLVYNDLKPENIMLTEE-QLKLIDLGAVSRIN----SFGYLY-GTPGFQAPEIVRTGP- 253

Query: 681 TVKVDVYSYGVLLLEIICLRR 701
           TV  D+Y+ G  L  +     
Sbjct: 254 TVATDIYTVGRTLAALTLDLP 274

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score =  101 bits (254), Expect = 2e-23
 Identities = 48/305 (15%), Positives = 88/305 (28%), Gaps = 54/305 (17%)

Query: 507 EELGRGA--FGTVYKGFVNMGSSNHVAVKKLN--SVFQDSEKEFKAEVNGIGQTHHKNLV 562
             +G+G     TV        +  +V V+++N  +   +     + E++     +H N+V
Sbjct: 31  TVIGKGFEDLMTVNLA-RYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIV 89

Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAM---GIAGGLFYLHEEC 619
                        +V  FM+ G+    L      +      IA    G+   L Y+H   
Sbjct: 90  PYRATFIADNELWVVTSFMAYGSAKD-LICTHFMDGMNELAIAYILQGVLKALDYIHHM- 147

Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYV------APE 673
               +H  +K  +IL+       +S       +              K  V      +PE
Sbjct: 148 --GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPE 205

Query: 674 WFRNMPI--TVKVDVYSYGVLLLEII------------------------CLRRNIDNEI 707
             +        K D+YS G+   E+                         CL        
Sbjct: 206 VLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPA 265

Query: 708 SKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTM-------LHRFVMVAFWCIQEDP 760
            ++  +     A     +    +          +           H FV     C+Q +P
Sbjct: 266 EELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQ---CLQRNP 322

Query: 761 SHRPT 765
             RP+
Sbjct: 323 DARPS 327

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score =  100 bits (250), Expect = 3e-23
 Identities = 70/274 (25%), Positives = 109/274 (39%), Gaps = 28/274 (10%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           E +G GA   V            VA+K++N    Q S  E   E+  + Q HH N+V   
Sbjct: 21  EVIGSGATAVVQAA-YCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYY 79

Query: 566 GYCDEGQNRLLVYEFMSNGTVA-----SFLFGDSKPNWKLRTEIAM---GIAGGLFYLHE 617
                     LV + +S G+V          G+ K      + IA     +  GL YLH+
Sbjct: 80  TSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK 139

Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR----GTKGYVAPE 673
                 IH D+K  NILL +  + +I+DFG++  L      T   +R    GT  ++APE
Sbjct: 140 N---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE 196

Query: 674 WF-RNMPITVKVDVYSYGVLLLEIICLRR-NIDNEISKVDKAILTDWAYDRYQERTLEAL 731
              +      K D++S+G+  +E+             KV    L +         +LE  
Sbjct: 197 VMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN------DPPSLETG 250

Query: 732 VENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPT 765
           V++            + +     C+Q+DP  RPT
Sbjct: 251 VQDKEMLKKYGKSFRKMIS---LCLQKDPEKRPT 281

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score =  100 bits (251), Expect = 3e-23
 Identities = 58/282 (20%), Positives = 111/282 (39%), Gaps = 43/282 (15%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE-KEFKAEVNGIGQTH-HKNLVRL 564
            E+G G  G V+K      + + +AVK++       E K    +++ + ++H    +V+ 
Sbjct: 31  GEMGSGTCGQVWKMR-FRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQC 89

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
            G      +  +  E M                 ++  ++ + I   L+YL E+    +I
Sbjct: 90  FGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK--HGVI 147

Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE-----WFRNMP 679
           H D+KP NILLD+    ++ DFG++  L  D++   +A  G   Y+APE           
Sbjct: 148 HRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA--GCAAYMAPERIDPPDPTKPD 205

Query: 680 ITVKVDVYSYGVLLLEIICLR---RNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL 736
             ++ DV+S G+ L+E+   +   +N   +                     L  +++ + 
Sbjct: 206 YDIRADVWSLGISLVELATGQFPYKNCKTDF------------------EVLTKVLQEEP 247

Query: 737 EAMNNVTM----LHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
             +            FV     C+ +D   RP      ++LE
Sbjct: 248 PLLPGHMGFSGDFQSFVKD---CLTKDHRKRPKYN---KLLE 283

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score =  102 bits (255), Expect = 9e-23
 Identities = 63/221 (28%), Positives = 105/221 (47%), Gaps = 20/221 (9%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKLN--SVFQDSEKEF-KAEVNGIGQTHHKNLVRL 564
           LG+G FG V      + ++  + A KKL    + +   +     E   + + + + +V  
Sbjct: 192 LGKGGFGEVC--ACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVS- 248

Query: 565 LGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEI--AMGIAGGLFYLHEECCT 621
           L Y  E ++ L LV   M+ G +   ++   +  +     +  A  I  GL  LH E   
Sbjct: 249 LAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE--- 305

Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT 681
           +I++ D+KP+NILLDDH + RISD GLA  +   Q+     + GT GY+APE  +N   T
Sbjct: 306 RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAPEVVKNERYT 363

Query: 682 VKVDVYSYGVLLLEIICLR-----RNIDNEISKVDKAILTD 717
              D ++ G LL E+I  +     R    +  +V++ +   
Sbjct: 364 FSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV 404

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  100 bits (250), Expect = 1e-22
 Identities = 37/268 (13%), Positives = 69/268 (25%), Gaps = 53/268 (19%)

Query: 472 RKKFMRPHQEDQGVSYMNLRCFTYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVA 531
                   Q  +  S +  R  T        RG    LG+       +   +  +     
Sbjct: 57  STSLWNTGQPFRVESELGERPRTLV------RG--TVLGQEDPYAYLEA-TDQETGESFE 107

Query: 532 VKKLNSVFQDSE---KEFKAEVNGIGQTHH----------------KNLVRLLGYCDEGQ 572
           V       +      K+ K EV  +                      +LV+        +
Sbjct: 108 VHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIR 167

Query: 573 -----------NRLLVYEFM--SNGTVASFLFGDSK----PNWKLRTEIAMGIAGGLFYL 615
                      +R  +Y  M  +  T    L   S          R ++ + +   L  L
Sbjct: 168 VRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASL 227

Query: 616 HEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF 675
           H      ++H  ++P +I+LD      ++ F                        A    
Sbjct: 228 HHYG---LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERML 284

Query: 676 RNMP-----ITVKVDVYSYGVLLLEIIC 698
                    +T   D ++ G+ +  I C
Sbjct: 285 PFGQHHPTLMTFAFDTWTLGLAIYWIWC 312

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 98.3 bits (245), Expect = 2e-22
 Identities = 60/201 (29%), Positives = 94/201 (46%), Gaps = 23/201 (11%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE---KEFKAEVNGIGQTHHKNLVR 563
            E+G G+FG VY    ++ +S  VA+KK++   + S    ++   EV  + +  H N ++
Sbjct: 60  REIGHGSFGAVYFA-RDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ 118

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR-TEIAM---GIAGGLFYLHEEC 619
             G         LV E+   G+ +  L    KP   L+  EIA    G   GL YLH   
Sbjct: 119 YRGCYLREHTAWLVMEYCL-GSASDLLEVHKKP---LQEVEIAAVTHGALQGLAYLHSH- 173

Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE---WFR 676
              +IH D+K  NILL +    ++ DFG A ++       N+ + GT  ++APE      
Sbjct: 174 --NMIHRDVKAGNILLSEPGLVKLGDFGSASIMA----PANSFV-GTPYWMAPEVILAMD 226

Query: 677 NMPITVKVDVYSYGVLLLEII 697
                 KVDV+S G+  +E+ 
Sbjct: 227 EGQYDGKVDVWSLGITCIELA 247

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 97.7 bits (244), Expect = 2e-22
 Identities = 52/217 (23%), Positives = 85/217 (39%), Gaps = 47/217 (21%)

Query: 506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQ-THHKNLVRL 564
           ++ LG GA   V    +N+ +S   AVK +             EV  + Q   H+N++ L
Sbjct: 18  EDVLGEGAHARVQTC-INLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76

Query: 565 LGYCDEGQNRLLVYEFMSNGTV--------------ASFLFGDSKPNWKLRTEIAMGIAG 610
           + + +E     LV+E M  G++              AS +  D              +A 
Sbjct: 77  IEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQD--------------VAS 122

Query: 611 GLFYLHEECCTQIIHCDIKPQNILL---DDHYNARISDFGLAKLLTLDQSHTNTAIR--- 664
            L +LH +    I H D+KP+NIL    +     +I DF L   + L+   +  +     
Sbjct: 123 ALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELL 179

Query: 665 ---GTKGYVAPEWFRNMPITVK-----VDVYSYGVLL 693
              G+  Y+APE                D++S GV+L
Sbjct: 180 TPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVIL 216

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 95.9 bits (239), Expect = 1e-21
 Identities = 51/202 (25%), Positives = 82/202 (40%), Gaps = 30/202 (14%)

Query: 506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQ-THHKNLVRL 564
           K+ LG G  G V +   +  +    A+K L         + + EV+   Q +   ++V +
Sbjct: 34  KQVLGLGVNGKVLEC-FHRRTGQKCALKLL-----YDSPKARQEVDHHWQASGGPHIVCI 87

Query: 565 LGYCDEGQNR----LLVYEFMSNGTVASFLF------GDSKPNWKLRTEIAMGIAGGLFY 614
           L   +   +     L++ E M  G     LF      GD     +   EI   I   + +
Sbjct: 88  LDVYENMHHGKRCLLIIMECMEGGE----LFSRIQERGDQAFTEREAAEIMRDIGTAIQF 143

Query: 615 LHEECCTQIIHCDIKPQNILL---DDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVA 671
           LH      I H D+KP+N+L    +     +++DFG AK  T +   T      T  YVA
Sbjct: 144 LHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQT---PCYTPYYVA 197

Query: 672 PEWFRNMPITVKVDVYSYGVLL 693
           PE           D++S GV++
Sbjct: 198 PEVLGPEKYDKSCDMWSLGVIM 219

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 94.6 bits (236), Expect = 2e-21
 Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 32/209 (15%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLN----SVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG G++G V +  ++  +    AVK L         + E   K E+  + +  HKN+++L
Sbjct: 13  LGEGSYGKVKEV-LDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQL 71

Query: 565 LG-YCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG----IAGGLFYLHEE 618
           +    +E + ++ +V E+   G     +  DS P  +     A G    +  GL YLH +
Sbjct: 72  VDVLYNEEKQKMYMVMEYCVCGMQE--ML-DSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ 128

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS----HTNTAIRGTKGYVAPEW 674
               I+H DIKP N+LL      +IS  G+A+ L    +     T+   +G+  +  PE 
Sbjct: 129 G---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTS---QGSPAFQPPEI 182

Query: 675 FRNM-----PITVKVDVYSYGVLLLEIIC 698
              +         KVD++S GV L  I  
Sbjct: 183 ANGLDTFSGF---KVDIWSAGVTLYNITT 208

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 96.3 bits (240), Expect = 2e-21
 Identities = 55/204 (26%), Positives = 83/204 (40%), Gaps = 31/204 (15%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQ-THHKNLVR 563
             + LG G  G V +   N  +    A+K L     D  K  + EV    + +   ++VR
Sbjct: 66  TSQVLGLGINGKVLQI-FNKRTQEKFALKMLQ----DCPKARR-EVELHWRASQCPHIVR 119

Query: 564 LLG-YCDEGQNR---LLVYEFMSNGTVASFLFGD--SKPNWKLRTE-----IAMGIAGGL 612
           ++  Y +    R   L+V E +  G     LF     + +    TE     I   I   +
Sbjct: 120 IVDVYENLYAGRKCLLIVMECLDGGE----LFSRIQDRGDQAF-TEREASEIMKSIGEAI 174

Query: 613 FYLHEECCTQIIHCDIKPQNILL---DDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGY 669
            YLH      I H D+KP+N+L      +   +++DFG AK  T   S T      T  Y
Sbjct: 175 QYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC--YTPYY 229

Query: 670 VAPEWFRNMPITVKVDVYSYGVLL 693
           VAPE           D++S GV++
Sbjct: 230 VAPEVLGPEKYDKSCDMWSLGVIM 253

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 89.9 bits (224), Expect = 4e-20
 Identities = 64/200 (32%), Positives = 95/200 (47%), Gaps = 21/200 (10%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           LG GA+G V    VN  +   VAVK ++     D  +  K E+      +H+N+V+  G+
Sbjct: 15  LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73

Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG----IAGGLFYLHEECCTQI 623
             EG  + L  E+ S G     LF   +P+  +    A      +  G+ YLH      I
Sbjct: 74  RREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GI 126

Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS----HTNTAIRGTKGYVAPEWFRNMP 679
            H DIKP+N+LLD+  N +ISDFGLA +   +      +      GT  YVAPE  +   
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC---GTLPYVAPELLKRRE 183

Query: 680 IT-VKVDVYSYGVLLLEIIC 698
                VDV+S G++L  ++ 
Sbjct: 184 FHAEPVDVWSCGIVLTAMLA 203

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 93.8 bits (233), Expect = 7e-20
 Identities = 55/225 (24%), Positives = 94/225 (41%), Gaps = 28/225 (12%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKLN--SVFQDSEKEF-KAEVN---GIGQTHHKNL 561
           +GRG FG VY        +  + A+K L+   +     +     E      +       +
Sbjct: 197 IGRGGFGEVYG--CRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI 254

Query: 562 VRLLGYCDEGQNRL-LVYEFMSNGTVASFLFGDSK-PNWKLRTEIAMGIAGGLFYLHEEC 619
           V  + Y     ++L  + + M+ G +   L          +R   A  I  GL ++H   
Sbjct: 255 VC-MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAE-IILGLEHMHNR- 311

Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE-WFRNM 678
              +++ D+KP NILLD+H + RISD GLA   +  + H      GT GY+APE   + +
Sbjct: 312 --FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA---SVGTHGYMAPEVLQKGV 366

Query: 679 PITVKVDVYSYGVLLLEIIC------LRRNIDNEISKVDKAILTD 717
                 D +S G +L +++         +  D    ++D+  LT 
Sbjct: 367 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--EIDRMTLTM 409

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 89.6 bits (223), Expect = 8e-20
 Identities = 49/230 (21%), Positives = 90/230 (39%), Gaps = 49/230 (21%)

Query: 506 KEELGRGAFGTVYKGFVNMGSSNHVAVK-----KLNSVFQDSEKEFKAEVNGIGQT---- 556
           K+E+G+G++G V     N   + + A+K     KL        +                
Sbjct: 18  KDEIGKGSYGVVKLA-YNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQP 76

Query: 557 -----------------HHKNLVRLLGYC---DEGQNRL-LVYEFMSNGTVASFLFGDSK 595
                             H N+V+L       D  ++ L +V+E ++ G     +  +  
Sbjct: 77  RGPIEQVYQEIAILKKLDHPNVVKL--VEVLDDPNEDHLYMVFELVNQGP----VM-EVP 129

Query: 596 PNWKLRTEIAMG----IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKL 651
               L  + A      +  G+ YLH +   +IIH DIKP N+L+ +  + +I+DFG++  
Sbjct: 130 TLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNE 186

Query: 652 LTLDQSHTNTAIRGTKGYVAPEWFRNMPITV---KVDVYSYGVLLLEIIC 698
                +  +  + GT  ++APE             +DV++ GV L   + 
Sbjct: 187 FKGSDALLSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVF 235

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 89.5 bits (223), Expect = 2e-19
 Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 32/206 (15%)

Query: 509 LGRGAFGTVY--KGFVNMGSSNHVAVKKLN--SVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           LG+G+FG V+  K      +    A+K L   ++        K E + + + +H  +V+L
Sbjct: 32  LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91

Query: 565 LGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTE-----------IAMGIAGGL 612
             Y  + + +L L+ +F+  G     LF       +L  E           +A  +A  L
Sbjct: 92  H-YAFQTEGKLYLILDFLRGGD----LF------TRLSKEVMFTEEDVKFYLAE-LALAL 139

Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAP 672
            +LH      II+ D+KP+NILLD+  + +++DFGL+K     +    +   GT  Y+AP
Sbjct: 140 DHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVEYMAP 195

Query: 673 EWFRNMPITVKVDVYSYGVLLLEIIC 698
           E       T   D +S+GVL+ E++ 
Sbjct: 196 EVVNRRGHTQSADWWSFGVLMFEMLT 221

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 88.5 bits (220), Expect = 3e-19
 Identities = 65/198 (32%), Positives = 95/198 (47%), Gaps = 17/198 (8%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLLGY 567
           LG GA+G V    VN  +   VAVK ++     D  +  K E+      +H+N+V+  G+
Sbjct: 15  LGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73

Query: 568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG----IAGGLFYLHEECCTQI 623
             EG  + L  E+ S G     LF   +P+  +    A      +  G+ YLH      I
Sbjct: 74  RREGNIQYLFLEYCSGGE----LFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GI 126

Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT--NTAIRGTKGYVAPEWFRNMPIT 681
            H DIKP+N+LLD+  N +ISDFGLA +   +      N    GT  YVAPE  +     
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-GTLPYVAPELLKRREFH 185

Query: 682 -VKVDVYSYGVLLLEIIC 698
              VDV+S G++L  ++ 
Sbjct: 186 AEPVDVWSCGIVLTAMLA 203

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 88.1 bits (219), Expect = 4e-19
 Identities = 50/199 (25%), Positives = 94/199 (47%), Gaps = 17/199 (8%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN--SVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           + +G+G F  V     ++ +   VA+K ++   +   S ++   EV  +   +H N+V+L
Sbjct: 21  KTIGKGNFAKVKLA-RHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 79

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG----IAGGLFYLHEECC 620
               +  +   L+ E+ S G     +F     + +++ + A      I   + Y H++  
Sbjct: 80  FEVIETEKTLYLIMEYASGGE----VFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR- 134

Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPI 680
             I+H D+K +N+LLD   N +I+DFG +   T+     +    G   Y APE F+    
Sbjct: 135 --IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG-KLDAFC-GAPPYAAPELFQGKKY 190

Query: 681 T-VKVDVYSYGVLLLEIIC 698
              +VDV+S GV+L  ++ 
Sbjct: 191 DGPEVDVWSLGVILYTLVS 209

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 89.4 bits (222), Expect = 4e-19
 Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 27/207 (13%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKLN--SVFQDSEKE-FKAEVNGIGQTHHKNLVRL 564
           +GRGAF  V    V M  +  V A+K +N   + +  E   F+ E + +     + + +L
Sbjct: 69  IGRGAFSEVA--VVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQL 126

Query: 565 LGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIA----MGIAGGLFYLHEEC 619
             +  + +N L LV E+   G + + L   SK   ++  E+A      I   +  +H   
Sbjct: 127 H-FAFQDENYLYLVMEYYVGGDLLTLL---SKFGERIPAEMARFYLAEIVMAIDSVHRL- 181

Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS-HTNTAIRGTKGYVAPEWFRNM 678
               +H DIKP NILLD   + R++DFG    L  D +  +  A+ GT  Y++PE  + +
Sbjct: 182 --GYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAV-GTPDYLSPEILQAV 238

Query: 679 PITVKVDVY-------SYGVLLLEIIC 698
                   Y       + GV   E+  
Sbjct: 239 GGGPGTGSYGPECDWWALGVFAYEMFY 265

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 88.9 bits (221), Expect = 6e-19
 Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 34/211 (16%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-EVNGIGQTHHKNLVRLL 565
           + +G G+FG V++  +    S+ VA+KK   V QD  K FK  E+  +    H N+V L 
Sbjct: 46  KVIGNGSFGVVFQAKLV--ESDEVAIKK---VLQD--KRFKNRELQIMRIVKHPNVVDLK 98

Query: 566 GY-----CDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG--------IAGG 611
            +       + +  L LV E++   TV        +   KL+  + M         +   
Sbjct: 99  AFFYSNGDKKDEVFLNLVLEYVPE-TVYRAS----RHYAKLKQTMPMLLIKLYMYQLLRS 153

Query: 612 LFYLHEECCTQIIHCDIKPQNILLDDHYNA-RISDFGLAKLLTLDQSHTNTAIRGTKGYV 670
           L Y+H      I H DIKPQN+LLD      ++ DFG AK   L     N +   ++ Y 
Sbjct: 154 LAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAK--ILIAGEPNVSYICSRYYR 208

Query: 671 APEW-FRNMPITVKVDVYSYGVLLLEIICLR 700
           APE  F     T  +D++S G ++ E++  +
Sbjct: 209 APELIFGATNYTTNIDIWSTGCVMAELMQGQ 239

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 89.4 bits (222), Expect = 6e-19
 Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 25/205 (12%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKLN--SVFQDSEKE-FKAEVNGIGQTHHKNLVRL 564
           +GRGAFG V    V + +++ V A+K LN   + + +E   F+ E + +     K +  L
Sbjct: 82  IGRGAFGEVA--VVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTL 139

Query: 565 LGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIA----MGIAGGLFYLHEEC 619
             Y  +  N L LV ++   G + + L   SK   +L  E+A      +   +  +H+  
Sbjct: 140 H-YAFQDDNNLYLVMDYYVGGDLLTLL---SKFEDRLPEEMARFYLAEMVIAIDSVHQL- 194

Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS-HTNTAIRGTKGYVAPEWFRNM 678
               +H DIKP NIL+D + + R++DFG    L  D +  ++ A+ GT  Y++PE  + M
Sbjct: 195 --HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV-GTPDYISPEILQAM 251

Query: 679 PITVK-----VDVYSYGVLLLEIIC 698
                      D +S GV + E++ 
Sbjct: 252 EGGKGRYGPECDWWSLGVCMYEMLY 276

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 87.9 bits (218), Expect = 6e-19
 Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 24/206 (11%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN--------SVFQDSEKEFKAEVNGIGQTHH 558
             LG GAFG V+   V+   +  V VK +          +      +   E+  + +  H
Sbjct: 30  SPLGSGAFGFVWTA-VDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEH 88

Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG----IAGGLFY 614
            N++++L   +      LV E   +G    F F D  P  +L   +A      +   + Y
Sbjct: 89  ANIIKVLDIFENQGFFQLVMEKHGSGL-DLFAFIDRHP--RLDEPLASYIFRQLVSAVGY 145

Query: 615 LHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS-HTNTAIRGTKGYVAPE 673
           L  +    IIH DIK +NI++ + +  ++ DFG A  L   +  +T     GT  Y APE
Sbjct: 146 LRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFC---GTIEYCAPE 199

Query: 674 WFRNMP-ITVKVDVYSYGVLLLEIIC 698
                P    +++++S GV L  ++ 
Sbjct: 200 VLMGNPYRGPELEMWSLGVTLYTLVF 225

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 88.6 bits (220), Expect = 8e-19
 Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 31/210 (14%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           + +G G+FG VY+      S   VA+KK   V QD   + + E+  + +  H N+VRL  
Sbjct: 60  KVIGNGSFGVVYQA-KLCDSGELVAIKK---VLQDKRFKNR-ELQIMRKLDHCNIVRLRY 114

Query: 567 YCDEGQNRL------LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG--------IAGGL 612
           +      +       LV +++   TV        +   + +  + +         +   L
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVA----RHYSRAKQTLPVIYVKLYMYQLFRSL 169

Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNA-RISDFGLAKLLTLDQSHTNTAIRGTKGYVA 671
            Y+H      I H DIKPQN+LLD      ++ DFG AK   L +   N +   ++ Y A
Sbjct: 170 AYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK--QLVRGEPNVSYICSRYYRA 224

Query: 672 PEW-FRNMPITVKVDVYSYGVLLLEIICLR 700
           PE  F     T  +DV+S G +L E++  +
Sbjct: 225 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 254

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 86.6 bits (215), Expect = 1e-18
 Identities = 63/296 (21%), Positives = 110/296 (37%), Gaps = 53/296 (17%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVK-----KLNSVFQDSEKE-FKAEVNGI----GQT 556
             LG+G FGTV+ G   +     VA+K     ++      S+      EV  +       
Sbjct: 37  PLLGKGGFGTVFAG-HRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGG 95

Query: 557 HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG----IAGGL 612
            H  ++RLL + +  +  +LV E          LF        L    +      +   +
Sbjct: 96  GHPGVIRLLDWFETQEGFMLVLERPLPAQD---LFDYITEKGPLGEGPSRCFFGQVVAAI 152

Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNA-RISDFGLAKLLTLDQSHTNTAIRGTKGYVA 671
            + H      ++H DIK +NIL+D      ++ DFG   LL  +         GT+ Y  
Sbjct: 153 QHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFD---GTRVYSP 206

Query: 672 PEWFRNMPIT-VKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEA 730
           PEW        +   V+S G+LL +++C     + +  ++ +A L    +  +      A
Sbjct: 207 PEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD-QEILEAELH---FPAHVSPDCCA 262

Query: 731 LVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ---MLEGVVEVPIPP 783
           L+                      C+   PS RP++ ++     M     +VP+ P
Sbjct: 263 LIR--------------------RCLAPKPSSRPSLEEILLDPWMQTPAEDVPLNP 298

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 86.5 bits (215), Expect = 1e-18
 Identities = 50/207 (24%), Positives = 92/207 (44%), Gaps = 26/207 (12%)

Query: 505 FKEELGRGAFGTVY----KGFVNMGSSNHVAVKKLN--SVFQDSEKEF-KAEVNGIGQTH 557
           F + LG G+F TV            +S   A+K L    + ++++  +   E + + +  
Sbjct: 34  FGKILGEGSFSTVVLARELA-----TSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD 88

Query: 558 HKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSK-PNWKLR---TEIAMGIAGGLF 613
           H   V+L     + +       +  NG +  ++           R    EI   +     
Sbjct: 89  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE---- 144

Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT--LDQSHTNTAIRGTKGYVA 671
           YLH +    IIH D+KP+NILL++  + +I+DFG AK+L+    Q+  N+   GT  YV+
Sbjct: 145 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS-FVGTAQYVS 200

Query: 672 PEWFRNMPITVKVDVYSYGVLLLEIIC 698
           PE           D+++ G ++ +++ 
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVA 227

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 87.0 bits (216), Expect = 2e-18
 Identities = 49/218 (22%), Positives = 87/218 (39%), Gaps = 47/218 (21%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK----AEVNGIGQTHHKNLV 562
              G+G FGTV  G     +   VA+KK   V QD    F+      +  +   HH N+V
Sbjct: 29  RMAGQGTFGTVQLG-KEKSTGMSVAIKK---VIQD--PRFRNRELQIMQDLAVLHHPNIV 82

Query: 563 RLL------GYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG-------- 607
           +L       G  D     L +V E++ + T+        +  ++ +              
Sbjct: 83  QLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCC----RNYYRRQVAPPPILIKVFLFQ 137

Query: 608 IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNA-RISDFGLAKLLTLDQSHTNTAIRGT 666
           +   +  LH      + H DIKP N+L+++     ++ DFG AK L+  + +        
Sbjct: 138 LIRSIGCLHLPSV-NVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNV------- 189

Query: 667 KGYVAPEWFRNMPI-------TVKVDVYSYGVLLLEII 697
             Y+   ++R   +       T  VD++S G +  E++
Sbjct: 190 -AYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMM 226

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 87.1 bits (216), Expect = 2e-18
 Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 24/203 (11%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKLN--SVFQDSEKE-FKAEVNGIGQTHHKNLVRL 564
           +GRGAFG V    V   S+  V A+K L+   + + S+   F  E + +   +   +V+L
Sbjct: 77  IGRGAFGEVQ--LVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 134

Query: 565 LGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLR---TEIAMGIAGGLFYLHEECC 620
             Y  +    L +V E+M  G + + +     P    R    E+ +     L  +H    
Sbjct: 135 F-YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLA----LDAIHS--- 186

Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD-QSHTNTAIRGTKGYVAPEWFRNMP 679
              IH D+KP N+LLD   + +++DFG    +  +     +TA+ GT  Y++PE  ++  
Sbjct: 187 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQG 245

Query: 680 ITVK----VDVYSYGVLLLEIIC 698
                    D +S GV L E++ 
Sbjct: 246 GDGYYGRECDWWSVGVFLYEMLV 268

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 85.1 bits (211), Expect = 5e-18
 Identities = 50/206 (24%), Positives = 84/206 (40%), Gaps = 24/206 (11%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN------SVFQDSEKEFKAEVNGIGQTHHK- 559
             LG G FG+VY G + +  +  VA+K +            +      EV  + +     
Sbjct: 49  PLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 107

Query: 560 -NLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG----IAGGLFY 614
             ++RLL + +   + +L+ E          LF        L+ E+A      +   + +
Sbjct: 108 SGVIRLLDWFERPDSFVLILERPEPV---QDLFDFITERGALQEELARSFFWQVLEAVRH 164

Query: 615 LHEECCTQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE 673
            H      ++H DIK +NIL+D +    ++ DFG   LL            GT+ Y  PE
Sbjct: 165 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD---GTRVYSPPE 218

Query: 674 WFRNMPIT-VKVDVYSYGVLLLEIIC 698
           W R          V+S G+LL +++C
Sbjct: 219 WIRYHRYHGRSAAVWSLGILLYDMVC 244

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 85.1 bits (211), Expect = 8e-18
 Identities = 59/231 (25%), Positives = 97/231 (41%), Gaps = 40/231 (17%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKLN--SVFQDSEKEF-KAEVNGIGQTHHKNLVRL 564
           +G+G+FG V    V    +  + A+K +N     + +E      E+  +    H  LV L
Sbjct: 23  IGKGSFGKVCI--VQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNL 80

Query: 565 LGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG----------IAGGLF 613
             Y  + +  + +V + +  G     L       + L+  +             +   L 
Sbjct: 81  W-YSFQDEEDMFMVVDLLLGGD----LR------YHLQQNVHFKEETVKLFICELVMALD 129

Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE 673
           YL  +   +IIH D+KP NILLD+H +  I+DF +A +L  +   T  A  GTK Y+APE
Sbjct: 130 YLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMA--GTKPYMAPE 184

Query: 674 WFRNMPI---TVKVDVYSYGVLLLEIICLRR----NIDNEISKVDKAILTD 717
            F +      +  VD +S GV   E++  RR           ++     T 
Sbjct: 185 MFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETT 235

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 82.6 bits (205), Expect = 1e-17
 Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 24/201 (11%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVK-----KLNSVFQDSEKEFKAEVNGIGQTHHKNLVR 563
           LG G FG V  G  +  + + VAVK     K+ S   D   + K E+  +    H ++++
Sbjct: 19  LGVGTFGKVKIG-EHQLTGHKVAVKILNRQKIRS--LDVVGKIKREIQNLKLFRHPHIIK 75

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG----IAGGLFYLHEEC 619
           L        +  +V E++S G     LF     + ++    A      I   + Y H   
Sbjct: 76  LYQVISTPTDFFMVMEYVSGGE----LFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM 131

Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS-HTNTAIRGTKGYVAPEWFRNM 678
              ++H D+KP+N+LLD H NA+I+DFGL+ +++  +   T+    G+  Y APE     
Sbjct: 132 ---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPEVISGR 185

Query: 679 PIT-VKVDVYSYGVLLLEIIC 698
                +VD++S GV+L  ++C
Sbjct: 186 LYAGPEVDIWSCGVILYALLC 206

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 84.8 bits (210), Expect = 2e-17
 Identities = 56/205 (27%), Positives = 86/205 (41%), Gaps = 31/205 (15%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKL--NSVFQDSEKEF-KAEVNGIGQTHHKNLVRL 564
           LG+G FG V    V   ++    A+K L    +    E      E   +  + H  L  L
Sbjct: 156 LGKGTFGKVI--LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 213

Query: 565 LGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEI----------AMGIAGGLF 613
             Y  +  +RL  V E+ + G     LF      + L  E              I   L 
Sbjct: 214 K-YSFQTHDRLCFVMEYANGGE----LF------FHLSRERVFSEDRARFYGAEIVSALD 262

Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE 673
           YLH E    +++ D+K +N++LD   + +I+DFGL K    D +   T   GT  Y+APE
Sbjct: 263 YLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYLAPE 319

Query: 674 WFRNMPITVKVDVYSYGVLLLEIIC 698
              +      VD +  GV++ E++C
Sbjct: 320 VLEDNDYGRAVDWWGLGVVMYEMMC 344

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 82.7 bits (205), Expect = 3e-17
 Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 21/198 (10%)

Query: 509 LGRGAFGTVYKGFV-NMGSSNHVAVKKLN--SVFQDSEKE-FKAEVNGIGQTHHKNLVRL 564
           LG G+FG V    V +  S NH A+K L+   V +  + E    E   +   +   LV+L
Sbjct: 49  LGTGSFGRVM--LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSK-PNWKLR---TEIAMGIAGGLFYLHEECC 620
                +  N  +V E+++ G + S L    +      R    +I +       YLH    
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FEYLHSL-- 160

Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPI 680
             +I+ D+KP+N+L+D     +++DFG AK     +  T T + GT   +APE   +   
Sbjct: 161 -DLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTWT-LCGTPEALAPEIILSKGY 215

Query: 681 TVKVDVYSYGVLLLEIIC 698
              VD ++ GVL+ E+  
Sbjct: 216 NKAVDWWALGVLIYEMAA 233

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 82.2 bits (204), Expect = 4e-17
 Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 36/209 (17%)

Query: 509 LGRGAFGTVY--KGFVNMGSSNHVAVKKLN--SVFQDSEKEF---KAEVNGIGQTHHKNL 561
           LG+G +G V+  +      +    A+K L    + ++  K+    KAE N + +  H  +
Sbjct: 25  LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRN-AKDTAHTKAERNILEEVKHPFI 83

Query: 562 VRLLGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTE-----------IAMGIA 609
           V L+ Y  +   +L L+ E++S G     LF       +L  E           +A  I+
Sbjct: 84  VDLI-YAFQTGGKLYLILEYLSGGE----LF------MQLEREGIFMEDTACFYLAE-IS 131

Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGY 669
             L +LH++    II+ D+KP+NI+L+   + +++DFGL K    D + T+T   GT  Y
Sbjct: 132 MALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT-FCGTIEY 187

Query: 670 VAPEWFRNMPITVKVDVYSYGVLLLEIIC 698
           +APE          VD +S G L+ +++ 
Sbjct: 188 MAPEILMRSGHNRAVDWWSLGALMYDMLT 216

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 82.8 bits (205), Expect = 5e-17
 Identities = 58/233 (24%), Positives = 90/233 (38%), Gaps = 63/233 (27%)

Query: 500 EVTRGFK--EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE------------KE 545
            V + ++  + +G GA G V     +     +VA+KKL+  FQ+              K 
Sbjct: 22  TVLKRYQNLKPIGSGAQGIVCAA-YDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKC 80

Query: 546 FKAEVNGIGQTHHKNLVRLL------GYCDEGQNRLLVYEFM------------SNGTVA 587
                       HKN++ LL         +E Q+  +V E M             +  ++
Sbjct: 81  VN----------HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMS 130

Query: 588 SFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFG 647
             L+        L          G+ +LH      IIH D+KP NI++      +I DFG
Sbjct: 131 YLLYQ------MLC---------GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFG 172

Query: 648 LAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLR 700
           LA+  T   S   T    T+ Y APE    M     VD++S G ++ E+I   
Sbjct: 173 LAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 223

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 81.9 bits (203), Expect = 6e-17
 Identities = 57/205 (27%), Positives = 85/205 (41%), Gaps = 32/205 (15%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKLN--SVFQDSEKEF-KAEVNGIGQTHHKNLVRL 564
           LG+G FG V    V   ++    A+K L    +    E      E   +  T H  L  L
Sbjct: 13  LGKGTFGKVI--LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70

Query: 565 LGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEI----------AMGIAGGLF 613
             Y  +  +RL  V E+ + G     LF      + L  E              I   L 
Sbjct: 71  K-YAFQTHDRLCFVMEYANGGE----LF------FHLSRERVFTEERARFYGAEIVSALE 119

Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE 673
           YLH      +++ DIK +N++LD   + +I+DFGL K    D +   T   GT  Y+APE
Sbjct: 120 YLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPE 175

Query: 674 WFRNMPITVKVDVYSYGVLLLEIIC 698
              +      VD +  GV++ E++C
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMC 200

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 80.7 bits (200), Expect = 1e-16
 Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 27/179 (15%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE-FKA----EVNGIGQTHHKNL 561
            ++G G++G V+K   N  +   VA+KK     +  +    K     E+  + Q  H NL
Sbjct: 9   GKIGEGSYGVVFKC-RNRDTGQIVAIKK---FLESEDDPVIKKIALREIRMLKQLKHPNL 64

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI---AMGIAGGLFYLHEE 618
           V LL      +   LV+E+  + TV   L  D          +          + + H+ 
Sbjct: 65  VNLLEVFRRKRRLHLVFEYCDH-TVLHEL--DRYQRGVPEHLVKSITWQTLQAVNFCHKH 121

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPEWFR 676
                IH D+KP+NIL+  H   ++ DFG A+LLT     + +         VA  W+R
Sbjct: 122 ---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDD--------EVATRWYR 169

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 80.7 bits (200), Expect = 1e-16
 Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 36/229 (15%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVN-----------GIGQ 555
            E+G GA+GTVYK   +  S + VA+K +      +       +             +  
Sbjct: 15  AEIGVGAYGTVYKA-RDPHSGHFVALKSVR---VPNGGGGGGGLPISTVREVALLRRLEA 70

Query: 556 THHKNLVRLL----GYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTE----IAM 606
             H N+VRL+        + + ++ LV+E +    + ++L  D  P   L  E    +  
Sbjct: 71  FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL--DKAPPPGLPAETIKDLMR 127

Query: 607 GIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGT 666
               GL +LH      I+H D+KP+NIL+      +++DFGLA++ +   + T   +  T
Sbjct: 128 QFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVV--T 182

Query: 667 KGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNI---DNEISKVDK 712
             Y APE          VD++S G +  E+   R+ +   ++E  ++ K
Sbjct: 183 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMF-RRKPLFCGNSEADQLGK 230

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 82.2 bits (203), Expect = 1e-16
 Identities = 58/230 (25%), Positives = 90/230 (39%), Gaps = 63/230 (27%)

Query: 500 EVTRGFK--EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE------------KE 545
            V + ++  + +G GA G V     +     +VA+KKL+  FQ+              K 
Sbjct: 59  TVLKRYQNLKPIGSGAQGIVCAA-YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKC 117

Query: 546 FKAEVNGIGQTHHKNLVRLL------GYCDEGQNRLLVYEFM------------SNGTVA 587
                       HKN++ LL         +E Q+  LV E M             +  ++
Sbjct: 118 VN----------HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMS 167

Query: 588 SFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFG 647
             L+        L          G+ +LH      IIH D+KP NI++      +I DFG
Sbjct: 168 YLLYQ------MLC---------GIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFG 209

Query: 648 LAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEII 697
           LA+  T   S   T    T+ Y APE    M     VD++S G ++ E++
Sbjct: 210 LAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 79.9 bits (198), Expect = 2e-16
 Identities = 49/219 (22%), Positives = 100/219 (45%), Gaps = 25/219 (11%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE---FKA--EVNGIGQTHHKNL 561
           E++G G +GTV+K   N  +   VA+K++     D + E     A  E+  + +  HKN+
Sbjct: 8   EKIGEGTYGTVFKA-KNRETHEIVALKRVR---LDDDDEGVPSSALREICLLKELKHKNI 63

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI---AMGIAGGLFYLHEE 618
           VRL       +   LV+EF     +  +   DS         +      +  GL + H  
Sbjct: 64  VRLHDVLHSDKKLTLVFEFCDQ-DLKKYF--DSCNGDLDPEIVKSFLFQLLKGLGFCHSR 120

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPEWFRN 677
               ++H D+KPQN+L++ +   ++++FGLA+   +  + ++   +  T  Y  P+    
Sbjct: 121 ---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV--TLWYRPPDVLFG 175

Query: 678 MPI-TVKVDVYSYGVLLLEIICLRRNI---DNEISKVDK 712
             + +  +D++S G +  E+    R +   ++   ++ +
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKR 214

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 82.1 bits (203), Expect = 2e-16
 Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 24/201 (11%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVK-----KLNSVFQDSEKEFKAEVNGIGQTHHKNLVR 563
           LG G FG V  G  +  + + VAVK     K+ S+  D   + + E+  +    H ++++
Sbjct: 24  LGVGTFGKVKVG-KHELTGHKVAVKILNRQKIRSL--DVVGKIRREIQNLKLFRHPHIIK 80

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG----IAGGLFYLHEEC 619
           L        +  +V E++S G     LF     N +L  + +      I  G+ Y H   
Sbjct: 81  LYQVISTPSDIFMVMEYVSGGE----LFDYICKNGRLDEKESRRLFQQILSGVDYCH--- 133

Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS-HTNTAIRGTKGYVAPEWFRNM 678
              ++H D+KP+N+LLD H NA+I+DFGL+ +++  +   T+    G+  Y APE     
Sbjct: 134 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPEVISGR 190

Query: 679 P-ITVKVDVYSYGVLLLEIIC 698
                +VD++S GV+L  ++C
Sbjct: 191 LYAGPEVDIWSSGVILYALLC 211

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 80.8 bits (200), Expect = 2e-16
 Identities = 54/227 (23%), Positives = 92/227 (40%), Gaps = 58/227 (25%)

Query: 500 EVTRGFK--EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQ 555
           E+ + +     +G GA+G+V    ++  S   VA+KKL+  FQ      +A  E+  +  
Sbjct: 21  ELPKTYVSPTHVGSGAYGSVCSA-IDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKH 79

Query: 556 THHKNLVRLL------GYCDEGQNRLLVYEFM------------SNGTVASFLFGDSKPN 597
             H+N++ LL             +  LV  FM            S   +   ++      
Sbjct: 80  MQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQ----- 134

Query: 598 WKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS 657
             L+         GL Y+H      ++H D+KP N+ +++    +I DFGLA+    D  
Sbjct: 135 -MLK---------GLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLAR--HADAE 179

Query: 658 HTNTAIRGTKGYVAPEWFR-------NMPITVKVDVYSYGVLLLEII 697
            T        GYV   W+R        M     VD++S G ++ E++
Sbjct: 180 MT--------GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEML 218

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 80.3 bits (199), Expect = 2e-16
 Identities = 57/226 (25%), Positives = 103/226 (45%), Gaps = 32/226 (14%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE---FKA--EVN---GIGQTHH 558
            E+G GA+G V+K          VA+K++      + +E        EV     +    H
Sbjct: 17  AEIGEGAYGKVFKARDLKNGGRFVALKRVR---VQTGEEGMPLSTIREVAVLRHLETFEH 73

Query: 559 KNLVRLL----GYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTE----IAMGIA 609
            N+VRL         + + +L LV+E +    + ++L  D  P   + TE    +   + 
Sbjct: 74  PNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYL--DKVPEPGVPTETIKDMMFQLL 130

Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGY 669
            GL +LH      ++H D+KPQNIL+      +++DFGLA++ +   + T+  +  T  Y
Sbjct: 131 RGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV--TLWY 185

Query: 670 VAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNI---DNEISKVDK 712
            APE          VD++S G +  E+   R+ +    +++ ++ K
Sbjct: 186 RAPEVLLQSSYATPVDLWSVGCIFAEMF-RRKPLFRGSSDVDQLGK 230

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 80.0 bits (198), Expect = 2e-16
 Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 27/179 (15%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE-FKA----EVNGIGQTHHKNL 561
             +G G++G V K   N  +   VA+KK     +  + +  K     E+  + Q  H+NL
Sbjct: 31  GLVGEGSYGMVMKC-RNKDTGRIVAIKKFL---ESDDDKMVKKIAMREIKLLKQLRHENL 86

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI---AMGIAGGLFYLHEE 618
           V LL  C + +   LV+EF+ + T+   L  +  PN      +      I  G+ + H  
Sbjct: 87  VNLLEVCKKKKRWYLVFEFVDH-TILDDL--ELFPNGLDYQVVQKYLFQIINGIGFCHSH 143

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPEWFR 676
               IIH DIKP+NIL+      ++ DFG A+ L    + + +         VA  W+R
Sbjct: 144 ---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDD--------EVATRWYR 191

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 79.1 bits (196), Expect = 4e-16
 Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 47/211 (22%)

Query: 509 LGRGAFGTVY----KGFVNMGSSNHVAVKKLN--SVFQDSEKE-FKAEVNGIGQTHHKNL 561
           LG G+FG V+    +      +  + A+K L    V +  + E    E   +    H  +
Sbjct: 14  LGTGSFGRVHLIRSRH-----NGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFI 68

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLR--------------TEIAMG 607
           +R+ G   + Q   ++ +++  G     LF        LR               E+ + 
Sbjct: 69  IRMWGTFQDAQQIFMIMDYIEGGE----LF------SLLRKSQRFPNPVAKFYAAEVCLA 118

Query: 608 IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK 667
               L YLH +    II+ D+KP+NILLD + + +I+DFG AK        T T + GT 
Sbjct: 119 ----LEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAK---YVPDVTYT-LCGTP 167

Query: 668 GYVAPEWFRNMPITVKVDVYSYGVLLLEIIC 698
            Y+APE     P    +D +S+G+L+ E++ 
Sbjct: 168 DYIAPEVVSTKPYNKSIDWWSFGILIYEMLA 198

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 79.7 bits (197), Expect = 4e-16
 Identities = 50/197 (25%), Positives = 76/197 (38%), Gaps = 18/197 (9%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYC 568
           +G G FG       +  +   VAVK +       E   + E+       H N+VR     
Sbjct: 28  IGSGNFGVARLM-RDKLTKELVAVKYIERGAAIDEN-VQREIINHRSLRHPNIVRFKEVI 85

Query: 569 DEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG----IAGGLFYLHEECCTQII 624
               +  ++ E+ S G     L+       +   + A      +  G+ Y H     QI 
Sbjct: 86  LTPTHLAIIMEYASGGE----LYERICNAGRFSEDEARFFFQQLLSGVSYCHSM---QIC 138

Query: 625 HCDIKPQNILLDDHY--NARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT- 681
           H D+K +N LLD       +I DFG +K   L  S   + + GT  Y+APE         
Sbjct: 139 HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-SQPKSTV-GTPAYIAPEVLLRQEYDG 196

Query: 682 VKVDVYSYGVLLLEIIC 698
              DV+S GV L  ++ 
Sbjct: 197 KIADVWSCGVTLYVMLV 213

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 79.2 bits (196), Expect = 5e-16
 Identities = 50/206 (24%), Positives = 94/206 (45%), Gaps = 35/206 (16%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKA--EVNGIGQTHHKNLVRLL 565
           LG G+FG V     +  +   VA+K ++  + + S+   +   E++ +    H ++++L 
Sbjct: 17  LGEGSFGKVKLA-THYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKL- 74

Query: 566 GYCDEGQNRLLVYEFMSNGT--------VASFLFGDSKPNWKLRTEIAMG----IAGGLF 613
                       Y+ ++  T            LF       ++  +        I   + 
Sbjct: 75  ------------YDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIE 122

Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE 673
           Y H     +I+H D+KP+N+LLDD+ N +I+DFGL+ ++T D +   T+  G+  Y APE
Sbjct: 123 YCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMT-DGNFLKTSC-GSPNYAAPE 177

Query: 674 WFRNMPIT-VKVDVYSYGVLLLEIIC 698
                     +VDV+S G++L  ++ 
Sbjct: 178 VINGKLYAGPEVDVWSCGIVLYVMLV 203

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 79.4 bits (196), Expect = 7e-16
 Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 30/213 (14%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV---FQDSEKEFK--AEVNGIGQTHH--- 558
            +LG G F TV+    +M ++ HVA+K +       + +E E K    VN    T     
Sbjct: 25  RKLGWGHFSTVWLAK-DMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSM 83

Query: 559 --KNLVRLLGYCD-EGQNRL---LVYEFMSNGTVASFL--FGDSKPNWKLRTEIAMGIAG 610
              ++++LL + + +G N +   +V+E +    + + +  +           +I+  +  
Sbjct: 84  GANHILKLLDHFNHKGPNGVHVVMVFEVLGE-NLLALIKKYEHRGIPLIYVKQISKQLLL 142

Query: 611 GLFYLHEECCTQIIHCDIKPQNILLDD------HYNARISDFGLAKLLTLDQSHTNTAIR 664
           GL Y+H  C   IIH DIKP+N+L++           +I+D G A        H   +I+
Sbjct: 143 GLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA---CWYDEHYTNSIQ 197

Query: 665 GTKGYVAPEWFRNMPITVKVDVYSYGVLLLEII 697
            T+ Y +PE     P     D++S   L+ E+I
Sbjct: 198 -TREYRSPEVLLGAPWGCGADIWSTACLIFELI 229

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 77.2 bits (191), Expect = 1e-15
 Identities = 49/177 (27%), Positives = 88/177 (49%), Gaps = 22/177 (12%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE---FKA--EVNGIGQTHHKNL 561
           E++G G +G VYK   N  +   VA+KK+     D+E E     A  E++ + + +H N+
Sbjct: 9   EKIGEGTYGVVYKA-RNKLTGEVVALKKIR---LDTETEGVPSTAIREISLLKELNHPNI 64

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIA----GGLFYLHE 617
           V+LL          LV+EF+    +  F+  D+     +   +          GL + H 
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCHS 121

Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPE 673
               +++H D+KPQN+L++     +++DFGLA+   +  +++T+  +  T  Y APE
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPE 173

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 78.5 bits (194), Expect = 1e-15
 Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 33/206 (16%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKLN--SVFQDSEKEF-KAEVNGIGQ-THHKNLVR 563
           +G+G+FG V        +     AVK L   ++ +  E++   +E N + +   H  LV 
Sbjct: 46  IGKGSFGKVL--LARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103

Query: 564 LLGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEI----------AMGIAGGL 612
           L  +  +  ++L  V ++++ G     LF      + L+ E           A  IA  L
Sbjct: 104 LH-FSFQTADKLYFVLDYINGGE----LF------YHLQRERCFLEPRARFYAAEIASAL 152

Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAP 672
            YLH      I++ D+KP+NILLD   +  ++DFGL K      S T+T   GT  Y+AP
Sbjct: 153 GYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTST-FCGTPEYLAP 208

Query: 673 EWFRNMPITVKVDVYSYGVLLLEIIC 698
           E     P    VD +  G +L E++ 
Sbjct: 209 EVLHKQPYDRTVDWWCLGAVLYEMLY 234

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 78.0 bits (193), Expect = 1e-15
 Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 33/206 (16%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKL--NSVFQDSEKEF-KAEVNGIGQ-THHKNLVR 563
           +GRG++  V    V +  ++ + A+K +    V  D + ++ + E +   Q ++H  LV 
Sbjct: 17  IGRGSYAKVL--LVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 74

Query: 564 LLGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG----------IAGGL 612
           L   C + ++RL  V E+++ G     L       + ++ +  +           I+  L
Sbjct: 75  LH-SCFQTESRLFFVIEYVNGGD----LM------FHMQRQRKLPEEHARFYSAEISLAL 123

Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAP 672
            YLHE     II+ D+K  N+LLD   + +++D+G+ K        T+T   GT  Y+AP
Sbjct: 124 NYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST-FCGTPNYIAP 179

Query: 673 EWFRNMPITVKVDVYSYGVLLLEIIC 698
           E  R       VD ++ GVL+ E++ 
Sbjct: 180 EILRGEDYGFSVDWWALGVLMFEMMA 205

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 79.3 bits (195), Expect = 2e-15
 Identities = 60/200 (30%), Positives = 94/200 (47%), Gaps = 21/200 (10%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKL--NSVFQDSEKEF-KAEVNGIGQ-THHKNLVR 563
           LG+G+FG V         ++ + AVK L  + V QD + E    E   +        L +
Sbjct: 349 LGKGSFGKVM--LSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQ 406

Query: 564 LLGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAM----GIAGGLFYLHEE 618
           L   C +  +RL  V E+++ G     L    +   + +   A+     IA GLF+L  +
Sbjct: 407 LH-SCFQTMDRLYFVMEYVNGGD----LMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK 461

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
               II+ D+K  N++LD   + +I+DFG+ K    D   T T   GT  Y+APE     
Sbjct: 462 ---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKT-FCGTPDYIAPEIIAYQ 517

Query: 679 PITVKVDVYSYGVLLLEIIC 698
           P    VD +++GVLL E++ 
Sbjct: 518 PYGKSVDWWAFGVLLYEMLA 537

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 77.8 bits (192), Expect = 2e-15
 Identities = 53/206 (25%), Positives = 98/206 (47%), Gaps = 33/206 (16%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKL--NSVFQDSEKEF-KAEVNGIGQ-THHKNLVR 563
           +GRG++  V    V +  ++ + A++ +    V  D + ++ + E +   Q ++H  LV 
Sbjct: 60  IGRGSYAKVL--LVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 117

Query: 564 LLGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG----------IAGGL 612
           L   C + ++RL  V E+++ G     L       + ++ +  +           I+  L
Sbjct: 118 LH-SCFQTESRLFFVIEYVNGGD----LM------FHMQRQRKLPEEHARFYSAEISLAL 166

Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAP 672
            YLHE     II+ D+K  N+LLD   + +++D+G+ K        T+T   GT  Y+AP
Sbjct: 167 NYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST-FCGTPNYIAP 222

Query: 673 EWFRNMPITVKVDVYSYGVLLLEIIC 698
           E  R       VD ++ GVL+ E++ 
Sbjct: 223 EILRGEDYGFSVDWWALGVLMFEMMA 248

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 76.9 bits (190), Expect = 2e-15
 Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 25/180 (13%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE---FKA--EVNGIGQTHHKNL 561
            +LG G +G VYK  ++  ++  VA+K++     + E+E     A  EV+ + +  H+N+
Sbjct: 40  TKLGEGTYGEVYKA-IDTVTNETVAIKRIR---LEHEEEGVPGTAIREVSLLKELQHRNI 95

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYLHEEC 619
           + L           L++E+  N  +  ++  D  P+  +R        +  G+ + H   
Sbjct: 96  IELKSVIHHNHRLHLIFEYAEN-DLKKYM--DKNPDVSMRVIKSFLYQLINGVNFCHSR- 151

Query: 620 CTQIIHCDIKPQNILLDDHYNAR-----ISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPE 673
             + +H D+KPQN+LL     +      I DFGLA+   +  +  T+  I  T  Y  PE
Sbjct: 152 --RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII--TLWYRPPE 207

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 76.9 bits (190), Expect = 3e-15
 Identities = 58/206 (28%), Positives = 91/206 (44%), Gaps = 33/206 (16%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKL--NSVFQDSEKE-FKAEVNGIGQ-THHKNLVR 563
           LG+G+FG V+        +N   A+K L  + V  D + E    E   +     H  L  
Sbjct: 25  LGKGSFGKVF--LAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82

Query: 564 LLGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTE----------IAMGIAGGL 612
           +     + +  L  V E+++ G     L       + +++            A  I  GL
Sbjct: 83  MF-CTFQTKENLFFVMEYLNGGD----LM------YHIQSCHKFDLSRATFYAAEIILGL 131

Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAP 672
            +LH +    I++ D+K  NILLD   + +I+DFG+ K   L  + TNT   GT  Y+AP
Sbjct: 132 QFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNT-FCGTPDYIAP 187

Query: 673 EWFRNMPITVKVDVYSYGVLLLEIIC 698
           E          VD +S+GVLL E++ 
Sbjct: 188 EILLGQKYNHSVDWWSFGVLLYEMLI 213

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 77.3 bits (191), Expect = 3e-15
 Identities = 47/240 (19%), Positives = 90/240 (37%), Gaps = 72/240 (30%)

Query: 500 EVTRGFK--EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE------------KE 545
            ++  F+    LG GA+G V     +  +   VA+KK+   F                K 
Sbjct: 8   NISSDFQLKSLLGEGAYGVVCSA-THKPTGEIVAIKKIE-PFDKPLFALRTLREIKILKH 65

Query: 546 FKAEVNGIGQTHHKNLVRLL-----GYCDEGQNRLLVYEFM-------------SNGTVA 587
           FK          H+N++ +         +      ++ E M             S+  + 
Sbjct: 66  FK----------HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQ 115

Query: 588 SFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFG 647
            F++        LR          +  LH    + +IH D+KP N+L++ + + ++ DFG
Sbjct: 116 YFIYQ------TLR---------AVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFG 157

Query: 648 LAKLLTLDQSHTNTAIRGTK---GYVAPEWFR-------NMPITVKVDVYSYGVLLLEII 697
           LA+++    +  +           +VA  W+R       +   +  +DV+S G +L E+ 
Sbjct: 158 LARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 77.4 bits (191), Expect = 3e-15
 Identities = 59/228 (25%), Positives = 93/228 (40%), Gaps = 59/228 (25%)

Query: 500 EVTRGFK--EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQ 555
           EV   ++  + +G GA+G V    V+  +   VA+KKL   FQ      +A  E+  +  
Sbjct: 22  EVRAVYRDLQPVGSGAYGAVCSA-VDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKH 80

Query: 556 THHKNLVRLL------GYCDEGQNRLLVYEFM-------------SNGTVASFLFGDSKP 596
             H+N++ LL         D+  +  LV  FM                 +   ++     
Sbjct: 81  MRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQ---- 136

Query: 597 NWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ 656
              L+         GL Y+H      IIH D+KP N+ +++    +I DFGLA+    D 
Sbjct: 137 --MLK---------GLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLAR--QADS 180

Query: 657 SHTNTAIRGTKGYVAPEWFR-------NMPITVKVDVYSYGVLLLEII 697
             T        GYV   W+R        M  T  VD++S G ++ E+I
Sbjct: 181 EMT--------GYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMI 220

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 76.9 bits (190), Expect = 3e-15
 Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 33/206 (16%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKL--NSVFQDSEKEF-KAEVNGIGQ-THHKNLVR 563
           LG+G+FG V         ++ + AVK L  + V QD + E    E   +        L +
Sbjct: 28  LGKGSFGKVM--LSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQ 85

Query: 564 LLGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTE----------IAMGIAGGL 612
           L   C +  +RL  V E+++ G     L       + ++             A  IA GL
Sbjct: 86  LH-SCFQTMDRLYFVMEYVNGGD----LM------YHIQQVGRFKEPHAVFYAAEIAIGL 134

Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAP 672
           F+L  +    II+ D+K  N++LD   + +I+DFG+ K    D   T T   GT  Y+AP
Sbjct: 135 FFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKT-FCGTPDYIAP 190

Query: 673 EWFRNMPITVKVDVYSYGVLLLEIIC 698
           E     P    VD +++GVLL E++ 
Sbjct: 191 EIIAYQPYGKSVDWWAFGVLLYEMLA 216

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 76.9 bits (190), Expect = 3e-15
 Identities = 59/206 (28%), Positives = 95/206 (46%), Gaps = 33/206 (16%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHV-AVKKL--NSVFQDSEKEF-KAEVNGIGQ-THHKNLVR 563
           LG+G+FG V      +  +  + AVK L  + + QD + E    E   +    +H  L +
Sbjct: 31  LGKGSFGKVM--LARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQ 88

Query: 564 LLGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTE----------IAMGIAGGL 612
           L   C +  +RL  V EF++ G     L       + ++             A  I   L
Sbjct: 89  LF-CCFQTPDRLFFVMEFVNGGD----LM------FHIQKSRRFDEARARFYAAEIISAL 137

Query: 613 FYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAP 672
            +LH++    II+ D+K  N+LLD   + +++DFG+ K    +   T T   GT  Y+AP
Sbjct: 138 MFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTAT-FCGTPDYIAP 193

Query: 673 EWFRNMPITVKVDVYSYGVLLLEIIC 698
           E  + M     VD ++ GVLL E++C
Sbjct: 194 EILQEMLYGPAVDWWAMGVLLYEMLC 219

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 76.6 bits (189), Expect = 4e-15
 Identities = 57/240 (23%), Positives = 98/240 (40%), Gaps = 51/240 (21%)

Query: 509 LGRGAFGTVY--KGFVNMGSSNHVAVKKLN--SVFQD--------SEKEFKAEVNGIGQT 556
           LG GA+G V+  +      +    A+K L   ++ Q         +E++    +      
Sbjct: 62  LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR----- 116

Query: 557 HHKNLVRLLGYCDEGQNRL-LVYEFMSNGTVASFLFGDSKPNWKLRTE-----------I 604
               LV L  Y  + + +L L+ ++++ G     LF        L              +
Sbjct: 117 QSPFLVTLH-YAFQTETKLHLILDYINGGE----LF------THLSQRERFTEHEVQIYV 165

Query: 605 AMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR 664
              I   L +LH+     II+ DIK +NILLD + +  ++DFGL+K    D++       
Sbjct: 166 GE-IVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFC 221

Query: 665 GTKGYVAPEWFRNMPI--TVKVDVYSYGVLLLEIIC-----LRRNIDNEISKVDKAILTD 717
           GT  Y+AP+  R         VD +S GVL+ E++            N  +++ + IL  
Sbjct: 222 GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKS 281

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 75.0 bits (185), Expect = 7e-15
 Identities = 46/205 (22%), Positives = 75/205 (36%), Gaps = 54/205 (26%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQ-THHKNLVR 563
             + LG G  G V +   N  +    A+K L     D  K  + EV    + +   ++VR
Sbjct: 22  TSQVLGLGINGKVLQI-FNKRTQEKFALKMLQ----DCPK-ARREVELHWRASQCPHIVR 75

Query: 564 LLG-YCDEGQNRLLVY---EFMSNGTVASFLFGD---SKPNWKLRTE-----IAMGIAGG 611
           ++  Y +    R  +    E +  G     LF      + +    TE     I   I   
Sbjct: 76  IVDVYENLYAGRKCLLIVMECLDGGE----LF-SRIQDRGDQAF-TEREASEIMKSIGEA 129

Query: 612 LFYLHEECCTQIIHCDIKPQNILL---DDHYNARISDFGLAKLLTLDQSHTNTAIRGTKG 668
           + YLH      I H D+KP+N+L      +   +++DFG AK  T             + 
Sbjct: 130 IQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT------------GEK 174

Query: 669 YVAPEWFRNMPITVKVDVYSYGVLL 693
           Y               D++S GV++
Sbjct: 175 Y-----------DKSCDMWSLGVIM 188

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 74.4 bits (183), Expect = 9e-15
 Identities = 34/286 (11%), Positives = 74/286 (25%), Gaps = 54/286 (18%)

Query: 507 EELGRGAFGTVYKGF-VNMGSSNHVAVKKLNSVFQDSE---KEFKAEVNGIGQTHHKNLV 562
              G       ++     +     VA+  ++      +   +E  +    + +     + 
Sbjct: 37  IFHGGVPPLQFWQALDTALD--RQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVA 94

Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           R+L         L+V E++  G++      D+ P+          +A      H      
Sbjct: 95  RVLDVVHTRAGGLVVAEWIRGGSLQEVA--DTSPSPVGAIRAMQSLAAAADAAHRA---G 149

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
           +      P  +         +S  G   L                  +            
Sbjct: 150 VALSIDHPSRVR--------VSIDGDVVL-------------AYPATMPDA-------NP 181

Query: 683 KVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQE-RTLEALVENDLEAMNN 741
           + D+   G  L  ++  R  +     +   A        +  E   ++  +   + A   
Sbjct: 182 QDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISA--- 238

Query: 742 VTMLHRFVMVAFWCIQEDPSHRP--TMRKVTQMLEGVVEVPIPPCP 785
                    VA   +Q D   R   T+  + Q    V +      P
Sbjct: 239 ---------VAARSVQGDGGIRSASTLLNLMQQATAVADRTEVLGP 275

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 75.5 bits (186), Expect = 1e-14
 Identities = 56/248 (22%), Positives = 98/248 (39%), Gaps = 78/248 (31%)

Query: 500 EVTRGFK--EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE------------KE 545
            V R ++  ++LG+GA+G V+K  ++  +   VAVKK+   FQ+S              E
Sbjct: 6   HVLRKYELVKKLGKGAYGIVWKS-IDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTE 64

Query: 546 FKAEVNGIGQTHHKNLVRLLG--YCDEGQNRLLVYEFM-------------SNGTVASFL 590
                       H+N+V LL     D  ++  LV+++M                     +
Sbjct: 65  LS---------GHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVV 115

Query: 591 FGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK 650
           +        ++          + YLH      ++H D+KP NILL+   + +++DFGL++
Sbjct: 116 YQ------LIK---------VIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGLSR 157

Query: 651 LLTLDQSHTNTAIRGTK--------------GYVAPEWFR-------NMPITVKVDVYSY 689
                +  TN                      YVA  W+R       +   T  +D++S 
Sbjct: 158 SFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSL 217

Query: 690 GVLLLEII 697
           G +L EI+
Sbjct: 218 GCILGEIL 225

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 74.6 bits (184), Expect = 2e-14
 Identities = 46/215 (21%), Positives = 87/215 (40%), Gaps = 55/215 (25%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQ--THHKNLVRL 564
            +LGRG +  V++  +N+ ++  V VK L  V    +K+ K E+  I +      N++ L
Sbjct: 42  RKLGRGKYSEVFEA-INITNNEKVVVKILKPV---KKKKIKREIK-ILENLRGGPNIITL 96

Query: 565 LG--YCDEGQNRLLVYEFM------------SNGTVASFLFGDSKPNWKLRTEIAMGIAG 610
                    +   LV+E +            ++  +  +++           EI   +  
Sbjct: 97  ADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMY-----------EILKALD- 144

Query: 611 GLFYLHEECCTQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTAIRGTKGY 669
              Y H      I+H D+KP N+++D +H   R+ D+GLA+     Q +           
Sbjct: 145 ---YCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYN--------VR 190

Query: 670 VAPEWFR-------NMPITVKVDVYSYGVLLLEII 697
           VA  +F+              +D++S G +L  +I
Sbjct: 191 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI 225

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 74.2 bits (183), Expect = 2e-14
 Identities = 51/180 (28%), Positives = 91/180 (50%), Gaps = 25/180 (13%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA----EVNGIGQTHHKNLV 562
           E+LG G + TVYKG +N  +  +VA+K++     DSE+   +    E++ + +  H+N+V
Sbjct: 11  EKLGNGTYATVYKG-LNKTTGVYVALKEVK---LDSEEGTPSTAIREISLMKELKHENIV 66

Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIA--------GGLFY 614
           RL           LV+EFM N  +  ++  DS+        + + +          GL +
Sbjct: 67  RLYDVIHTENKLTLVFEFMDN-DLKKYM--DSRTVGNTPRGLELNLVKYFQWQLLQGLAF 123

Query: 615 LHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPE 673
            HE    +I+H D+KPQN+L++     ++ DFGLA+   +   + ++  +  T  Y AP+
Sbjct: 124 CHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV--TLWYRAPD 178

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 74.1 bits (183), Expect = 2e-14
 Identities = 50/176 (28%), Positives = 89/176 (50%), Gaps = 22/176 (12%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE---FKA--EVNGIGQTHHKNL 561
           E++G G +G VYK   + G    VA+K+   +  D+E E     A  E++ + + HH N+
Sbjct: 27  EKVGEGTYGVVYKAKDSQG--RIVALKR---IRLDAEDEGIPSTAIREISLLKELHHPNI 81

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI---AMGIAGGLFYLHEE 618
           V L+      +   LV+EFM    +   L  D        ++I      +  G+ + H+ 
Sbjct: 82  VSLIDVIHSERCLTLVFEFMEKD-LKKVL--DENKTGLQDSQIKIYLYQLLRGVAHCHQH 138

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPE 673
              +I+H D+KPQN+L++     +++DFGLA+   +  +S+T+  +  T  Y AP+
Sbjct: 139 ---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV--TLWYRAPD 189

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 74.7 bits (184), Expect = 2e-14
 Identities = 57/228 (25%), Positives = 92/228 (40%), Gaps = 59/228 (25%)

Query: 500 EVTRGFK--EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQ 555
           EV   ++    +G GA+G+V     +  +   VAVKKL+  FQ      +   E+  +  
Sbjct: 26  EVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKH 84

Query: 556 THHKNLVRLL------GYCDEGQNRLLVYEFM-------------SNGTVASFLFGDSKP 596
             H+N++ LL         +E  +  LV   M             ++  V   ++     
Sbjct: 85  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ---- 140

Query: 597 NWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ 656
              LR         GL Y+H      IIH D+KP N+ +++    +I DFGLA+      
Sbjct: 141 --ILR---------GLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTAD 184

Query: 657 SHTNTAIRGTKGYVAPEWFR-------NMPITVKVDVYSYGVLLLEII 697
             T        GYVA  W+R        M     VD++S G ++ E++
Sbjct: 185 EMT--------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 224

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 73.3 bits (181), Expect = 2e-14
 Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 22/176 (12%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE---FKA--EVNGIGQTHHKNL 561
           E++G G +G VYK   N G     A+KK   +  + E E        E++ + +  H N+
Sbjct: 8   EKIGEGTYGVVYKAQNNYG--ETFALKK---IRLEKEDEGIPSTTIREISILKELKHSNI 62

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEI---AMGIAGGLFYLHEE 618
           V+L       +  +LV+E +    +   L  D               + +  G+ Y H+ 
Sbjct: 63  VKLYDVIHTKKRLVLVFEHLDQD-LKKLL--DVCEGGLESVTAKSFLLQLLNGIAYCHDR 119

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPE 673
              +++H D+KPQN+L++     +I+DFGLA+   +  + +T+  +  T  Y AP+
Sbjct: 120 ---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV--TLWYRAPD 170

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 75.2 bits (185), Expect = 2e-14
 Identities = 45/258 (17%), Positives = 89/258 (34%), Gaps = 89/258 (34%)

Query: 500 EVTRGFK--EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE------------KE 545
           ++   ++    +G G++G V +   +      VA+KK+  VF+D                
Sbjct: 50  QIPDRYEIRHLIGTGSYGHVCEA-YDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNR 108

Query: 546 FKAEVNGIGQTHHKNLVRLL----GYCDEGQNRL-LVYEFM--------------SNGTV 586
                       H ++V++L        E  + L +V E                +   +
Sbjct: 109 LN----------HDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHI 158

Query: 587 ASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDF 646
            + L+        L          G+ Y+H      I+H D+KP N L++   + ++ DF
Sbjct: 159 KTLLYN------LLV---------GVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDF 200

Query: 647 GLAKLLTLDQSHTNTAIRGTK--------------------GYVAPEWFR-------NMP 679
           GLA+ +   ++  +      +                    G+V   W+R          
Sbjct: 201 GLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQEN 260

Query: 680 ITVKVDVYSYGVLLLEII 697
            T  +DV+S G +  E++
Sbjct: 261 YTEAIDVWSIGCIFAELL 278

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 74.8 bits (184), Expect = 3e-14
 Identities = 50/274 (18%), Positives = 90/274 (32%), Gaps = 84/274 (30%)

Query: 479 HQEDQGVSYMNLRCFTYKELVEVTRGFK--EELGRGAFGTVYKGFVNMGSSNHVAVKKLN 536
           H      S      F   + V V   +     +GRG++G VY    +  +  +VA+KK+N
Sbjct: 2   HHHHHHSSGRENLYFQGIKNVHVPDNYIIKHLIGRGSYGYVYLA-YDKNTEKNVAIKKVN 60

Query: 537 SVFQDSE------------KEFKAEVNGIGQTHHKNLVRLL-----GYCDEGQNRLLVYE 579
            +F+D                 K             ++RL          +     +V E
Sbjct: 61  RMFEDLIDCKRILREITILNRLK----------SDYIIRLYDLIIPDDLLKFDELYIVLE 110

Query: 580 FM--------------SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIH 625
                           +   + + L+        L          G  ++HE   + IIH
Sbjct: 111 IADSDLKKLFKTPIFLTEEHIKTILYN------LLL---------GENFIHE---SGIIH 152

Query: 626 CDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK---------------GYV 670
            D+KP N LL+   + ++ DFGLA+ +  ++                           +V
Sbjct: 153 RDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHV 212

Query: 671 APEWFR-------NMPITVKVDVYSYGVLLLEII 697
              W+R           T  +D++S G +  E++
Sbjct: 213 VTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 73.9 bits (182), Expect = 4e-14
 Identities = 56/243 (23%), Positives = 90/243 (37%), Gaps = 68/243 (27%)

Query: 495 YKELVEVTRGFK--EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS------EKEF 546
             EL  +   +     +  G++G V  G  + G    VA+K++ +   D          F
Sbjct: 14  IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEG--IPVAIKRVFNTVSDGRTVNILSDSF 71

Query: 547 KA-----EVNGIGQTHHKNLVRLLG----YCDEGQNRL-LVYEFM--------------- 581
                  E+  +   HH N++ L      + +   ++L LV E M               
Sbjct: 72  LCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVI 131

Query: 582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNA 641
           S   +  F++        L          GL  LHE     ++H D+ P NILL D+ + 
Sbjct: 132 SPQHIQYFMYH------ILL---------GLHVLHE---AGVVHRDLHPGNILLADNNDI 173

Query: 642 RISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR-------NMPITVKVDVYSYGVLLL 694
            I DF LA+  T D + T         YV   W+R           T  VD++S G ++ 
Sbjct: 174 TICDFNLAREDTADANKT--------HYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMA 225

Query: 695 EII 697
           E+ 
Sbjct: 226 EMF 228

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 74.0 bits (182), Expect = 5e-14
 Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 36/208 (17%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV---FQDSEKEFK--AEVNGIGQTHHKNL 561
           + +G+G+FG V K + +     HVA+K + +     + + +E +    +    + +  N+
Sbjct: 103 KVIGKGSFGQVVKAY-DHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNV 161

Query: 562 VRLLGYCD---------E--GQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAG 610
           + +L             E    N   +YE +       F       +  L  + A  I  
Sbjct: 162 IHMLENFTFRNHICMTFELLSMN---LYELIKKNKFQGF-------SLPLVRKFAHSILQ 211

Query: 611 GLFYLHEECCTQIIHCDIKPQNILLDDHYNA--RISDFGLAKLLTLDQSHTNTAIRGTKG 668
            L  LH+    +IIHCD+KP+NILL     +  ++ DFG +     +     T I+ ++ 
Sbjct: 212 CLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSS---CYEHQRVYTYIQ-SRF 264

Query: 669 YVAPEWFRNMPITVKVDVYSYGVLLLEI 696
           Y APE        + +D++S G +L E+
Sbjct: 265 YRAPEVILGARYGMPIDMWSLGCILAEL 292

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 73.0 bits (180), Expect = 6e-14
 Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 51/170 (30%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT---------- 556
           + LG G F TVYK   +  ++  VA+KK+    +   K+      GI +T          
Sbjct: 16  DFLGEGQFATVYKA-RDKNTNQIVAIKKIKLGHRSEAKD------GINRTALREIKLLQE 68

Query: 557 -HHKNLVRLLGYCDEGQNRLLVYEFM---------------SNGTVASFLFGDSKPNWKL 600
             H N++ LL       N  LV++FM               +   + +++          
Sbjct: 69  LSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYML--------- 119

Query: 601 RTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK 650
                M    GL YLH+     I+H D+KP N+LLD++   +++DFGLAK
Sbjct: 120 -----M-TLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAK 160

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 72.7 bits (179), Expect = 9e-14
 Identities = 54/239 (22%), Positives = 95/239 (39%), Gaps = 77/239 (32%)

Query: 500 EVTRGFK--EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE------------KE 545
           +V   +     +G GA+G V     +  +   VA+KK++  F+                 
Sbjct: 24  DVGPRYTNLSYIGEGAYGMVCSA-YDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLR 81

Query: 546 FKAEVNGIGQTHHKNLVRLL-----GYCDEGQNRLLVYEFM-------------SNGTVA 587
           F+          H+N++ +         ++ ++  +V + M             SN  + 
Sbjct: 82  FR----------HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHIC 131

Query: 588 SFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFG 647
            FL+        LR         GL Y+H      ++H D+KP N+LL+   + +I DFG
Sbjct: 132 YFLYQ------ILR---------GLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFG 173

Query: 648 LAKLLTLDQSHTN--TAIRGTKGYVAPEWFR-------NMPITVKVDVYSYGVLLLEII 697
           LA++   D  HT   T       YVA  W+R       +   T  +D++S G +L E++
Sbjct: 174 LARVADPDHDHTGFLT------EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 226

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 72.3 bits (178), Expect = 1e-13
 Identities = 43/159 (27%), Positives = 75/159 (47%), Gaps = 26/159 (16%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE---FKA--EVNGIGQTHHKNL 561
            ++G+G FG V+K   +  +   VA+KK   V  ++EKE     A  E+  +    H+N+
Sbjct: 23  AKIGQGTFGEVFKA-RHRKTGQKVALKK---VLMENEKEGFPITALREIKILQLLKHENV 78

Query: 562 VRLLGYCDEGQNRL--------LVYEFMSNGTVASFLFGDSKPNWKLRTEI---AMGIAG 610
           V L+  C    +          LV++F  +  +A  L   +       +EI      +  
Sbjct: 79  VNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLL--SNVLVKFTLSEIKRVMQMLLN 135

Query: 611 GLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLA 649
           GL+Y+H     +I+H D+K  N+L+      +++DFGLA
Sbjct: 136 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLA 171

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 72.4 bits (178), Expect = 1e-13
 Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 26/203 (12%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVK--KLNSVFQD-SEKEFK--AEVNGIGQTHHKNL 561
             +G+G+FG V K + +      VA+K  K    F + ++ E +    +N         +
Sbjct: 60  SLIGKGSFGQVVKAY-DRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYI 118

Query: 562 VRLLGYCDEGQNRLLVYEFMS-NGTVASFLFGDSKPN------WKLRTEIAMGIAGGLFY 614
           V L  +     +  LV+E +S N      L+   +          L  + A  +   L +
Sbjct: 119 VHLKRHFMFRNHLCLVFEMLSYN------LYDLLRNTNFRGVSLNLTRKFAQQMCTALLF 172

Query: 615 LHEECCTQIIHCDIKPQNILLDDHYNA--RISDFGLAKLLTLDQSHTNTAIRGTKGYVAP 672
           L       IIHCD+KP+NILL +   +  +I DFG +             I+ ++ Y +P
Sbjct: 173 LATPEL-SIIHCDLKPENILLCNPKRSAIKIVDFGSS---CQLGQRIYQYIQ-SRFYRSP 227

Query: 673 EWFRNMPITVKVDVYSYGVLLLE 695
           E    MP  + +D++S G +L+E
Sbjct: 228 EVLLGMPYDLAIDMWSLGCILVE 250

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 72.5 bits (178), Expect = 1e-13
 Identities = 46/242 (19%), Positives = 87/242 (35%), Gaps = 69/242 (28%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA-EVNGIGQTHHKNLVRLL 565
           + LG G+FG V +   ++ S    A+KK   V QD    +K  E++ +    H N+++L+
Sbjct: 13  KTLGTGSFGIVCEV-FDIESGKRFALKK---VLQD--PRYKNRELDIMKVLDHVNIIKLV 66

Query: 566 GYCDEGQNRL--------------------------------------LVYEFMSNGTVA 587
            Y     +                                        ++ E++ + T+ 
Sbjct: 67  DYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLH 125

Query: 588 SFLFGDSKPNWKLRTE----IAMGIAGGLFYLHEECCTQIIHCDIKPQNILLD-DHYNAR 642
             L    +    +           +   + ++H      I H DIKPQN+L++      +
Sbjct: 126 KVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH---SLGICHRDIKPQNLLVNSKDNTLK 182

Query: 643 ISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR-------NMPITVKVDVYSYGVLLLE 695
           + DFG AK L   +            Y+   ++R           T  +D++S G +  E
Sbjct: 183 LCDFGSAKKLIPSEPSV--------AYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGE 234

Query: 696 II 697
           +I
Sbjct: 235 LI 236

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 71.5 bits (176), Expect = 1e-13
 Identities = 45/175 (25%), Positives = 88/175 (50%), Gaps = 20/175 (11%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA----EVNGIGQTHHKNLV 562
           ++LG G + TVYKG  +  + N VA+K+   +  + E+        EV+ +    H N+V
Sbjct: 8   DKLGEGTYATVYKGK-SKLTDNLVALKE---IRLEHEEGAPCTAIREVSLLKDLKHANIV 63

Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIA--MG-IAGGLFYLHEEC 619
            L       ++  LV+E++    +  +L  D   N      +   +  +  GL Y H + 
Sbjct: 64  TLHDIIHTEKSLTLVFEYLDK-DLKQYL--DDCGNIINMHNVKLFLFQLLRGLAYCHRQ- 119

Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL-DQSHTNTAIRGTKGYVAPE 673
             +++H D+KPQN+L+++    +++DFGLA+  ++  +++ N  +  T  Y  P+
Sbjct: 120 --KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPD 170

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 70.0 bits (172), Expect = 5e-13
 Identities = 49/239 (20%), Positives = 91/239 (38%), Gaps = 68/239 (28%)

Query: 500 EVTRGFK--EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKA--EVNGIGQ 555
           ++   +   + LG G  G V+   V+      VA+KK+  V  D +    A  E+  I +
Sbjct: 8   DLGSRYMDLKPLGCGGNGLVFSA-VDNDCDKRVAIKKI--VLTDPQSVKHALREIKIIRR 64

Query: 556 THHKNLVRLL--------------GYCDEGQNRLLVYEFM-------------SNGTVAS 588
             H N+V++               G   E  +  +V E+M                    
Sbjct: 65  LDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARL 124

Query: 589 FLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLD-DHYNARISDFG 647
           F++        LR         GL Y+H      ++H D+KP N+ ++ +    +I DFG
Sbjct: 125 FMYQ------LLR---------GLKYIHS---ANVLHRDLKPANLFINTEDLVLKIGDFG 166

Query: 648 LAKLLTLDQSHTN--TAIRGTKGYVAPEWFR-------NMPITVKVDVYSYGVLLLEII 697
           LA+++    SH    +        +  +W+R           T  +D+++ G +  E++
Sbjct: 167 LARIMDPHYSHKGHLS------EGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEML 219

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 70.0 bits (171), Expect = 7e-13
 Identities = 46/192 (23%), Positives = 72/192 (37%), Gaps = 51/192 (26%)

Query: 604 IAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAI 663
            +  +A G+ +L    C   IH D+  +NILL +    +I DFGLA+    D       +
Sbjct: 198 YSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLAR----DIYKDPDYV 250

Query: 664 RGTKGYV-----APEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW 718
           R     +     APE   +   T++ DV+S+GVLL EI  L                   
Sbjct: 251 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL------------------- 291

Query: 719 AYDRYQERTLEALVENDLEAMNNVTMLHR------------FVMVAFWCIQEDPSHRPTM 766
               Y        V+ D E    +    R              M+  W    +PS RPT 
Sbjct: 292 GASPYPG------VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCW--HGEPSQRPTF 343

Query: 767 RKVTQMLEGVVE 778
            ++ + L  +++
Sbjct: 344 SELVEHLGNLLQ 355

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 65.3 bits (159), Expect = 2e-11
 Identities = 40/155 (25%), Positives = 61/155 (39%), Gaps = 18/155 (11%)

Query: 505 FKEELGRGAFGTVYKGFVN----MGSSNHVAVKKLNSVFQDSE-KEFKAEVN---GIGQT 556
             + LGRGAFG V +          +   VAVK L      SE +   +E+     IG  
Sbjct: 26  LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-- 83

Query: 557 HHKNLVRLLGYC-DEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYL 615
           HH N+V LLG C   G   +++ EF   G ++++L          R E       G  + 
Sbjct: 84  HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL-------RSKRNEFVPYKTKGARFR 136

Query: 616 HEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK 650
             +     I  D+K +   +    ++  S F   K
Sbjct: 137 QGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276

 Score = 64.7 bits (156), Expect = 2e-11
 Identities = 47/278 (16%), Positives = 77/278 (27%), Gaps = 42/278 (15%)

Query: 18  TAAQSNGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFL----PAIWYYKIPSK 73
                   +   Q L+A +     LSP++ F L   Q D   L +      +W       
Sbjct: 9   FNGVGTSVLPAYQTLSAGQY---LLSPNQRFKLLL-QGDGN-LVIQDNGATVWVANEQQP 63

Query: 74  TIVWYASAVNPAPRGSKLRLTANRGLVLEDPEGREIWKSEIST------GQAAFGVLYDT 127
                      AP    L      G  L+D   R +W ++ ST            VL D 
Sbjct: 64  FSSTIPLRNKKAP----LAFYVQYGAFLDDYSRRRVWLTDNSTFTSNDQWNRTHLVLQDD 119

Query: 128 GNFLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLLEDGNA 187
           GN ++V++ +              + +  +      S   +   +  G  +     DGN 
Sbjct: 120 GNIVLVDSLALWNGTPAIPLVPGAIDSLLL---APGSELVQGVVYGAGASKLVFQGDGNL 176

Query: 188 VLNTINLESGFAYDAYFWSNTFDTNRSNAGYRVVFNESGQLYVLRENKQRASLVPETVSA 247
           V        G    A + + T          R VF   G L V          +  + + 
Sbjct: 177 VA------YGPNGAATWNAGTQ----GKGAVRAVFQGDGNLVVYGAGNAV---LWHSHTG 223

Query: 248 KENYLRATLNFDGVFIFYSHPKNNSTGDAIWSVSDVLP 285
                   L  +G                +W+     P
Sbjct: 224 GHASAVLRLQANGSIAILD-------EKPVWARFGFQP 254

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A* Length = 276

 Score = 41.6 bits (96), Expect = 6e-04
 Identities = 13/91 (14%), Positives = 24/91 (26%), Gaps = 4/91 (4%)

Query: 71  PSKTIVWYASAVNPAPRGSKLRLTANRGLVLEDPEGREIWKSEISTGQAAFGVLYDTGNF 130
           P+    W A          +     +  LV+       +W S      +A   L   G+ 
Sbjct: 181 PNGAATWNAGTQGKG--AVRAVFQGDGNLVVYGAGNAVLWHSHTGGHASAVLRLQANGSI 238

Query: 131 LIVNTNSERLWQSFDHPTDTLLPTQTMERGG 161
            I++     +W  F          +      
Sbjct: 239 AILDEKP--VWARFGFQPTYRHIRKINPDQK 267

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 65.6 bits (160), Expect = 2e-11
 Identities = 35/168 (20%), Positives = 66/168 (39%), Gaps = 34/168 (20%)

Query: 506 KEELGRGAFGTVYKG-FVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT------HH 558
             ++GRG +G VYK    +       A+K++        +     ++   +        H
Sbjct: 26  GCKVGRGTYGHVYKAKRKDGKDDKDYALKQI--------EGTGISMSACREIALLRELKH 77

Query: 559 KNLVRLLGYCDEGQNRL--LVYEFMSNGTVASFL-FGDSKPNWKLRTEIAMG-------- 607
            N++ L        +R   L++++  +  +   + F  +    K   ++  G        
Sbjct: 78  PNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQ 136

Query: 608 IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNAR----ISDFGLAKL 651
           I  G+ YLH      ++H D+KP NIL+      R    I+D G A+L
Sbjct: 137 ILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFARL 181

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 63.5 bits (155), Expect = 7e-11
 Identities = 50/224 (22%), Positives = 84/224 (37%), Gaps = 52/224 (23%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV---FQDSEKEFK--AEVNGIGQTHHKNL 561
             LG G FG V +   +    + VA+K + +V    + +  E     ++    + +    
Sbjct: 25  GNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLC 84

Query: 562 VRLLGYCDE-----------GQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAG 610
           V +  + +            G+N    +EF+       +      P   +R  +A  +  
Sbjct: 85  VLMSDWFNFHGHMCIAFELLGKN---TFEFLKENNFQPY------PLPHVR-HMAYQLCH 134

Query: 611 GLFYLHEECCTQIIHCDIKPQNILLDDHYNA-------------------RISDFGLAKL 651
            L +LHE    Q+ H D+KP+NIL  +                       R++DFG A  
Sbjct: 135 ALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA-- 189

Query: 652 LTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLE 695
            T D  H  T +  T+ Y  PE    +      DV+S G +L E
Sbjct: 190 -TFDHEHHTTIVA-TRHYRPPEVILELGWAQPCDVWSIGCILFE 231

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 62.3 bits (152), Expect = 2e-10
 Identities = 53/224 (23%), Positives = 87/224 (38%), Gaps = 52/224 (23%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVK--KLNSVFQD-SEKEFK--AEVNGIGQTHHKNL 561
           + LG GAFG V +   +     HVAVK  K    + + +  E +    +N          
Sbjct: 20  DTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRC 79

Query: 562 VRLLGYCD---------E--GQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAG 610
           V++L + +         E  G +    Y+F+       F          +R ++A  I  
Sbjct: 80  VQMLEWFEHHGHICIVFELLGLS---TYDFIKENGFLPF------RLDHIR-KMAYQICK 129

Query: 611 GLFYLHEECCTQIIHCDIKPQNILLDDHYNA-------------------RISDFGLAKL 651
            + +LH     ++ H D+KP+NIL                          ++ DFG A  
Sbjct: 130 SVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA-- 184

Query: 652 LTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLE 695
            T D  H +T +  T+ Y APE    +  +   DV+S G +L+E
Sbjct: 185 -TYDDEHHSTLVS-TRHYRAPEVILALGWSQPCDVWSIGCILIE 226

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 61.1 bits (148), Expect = 6e-10
 Identities = 50/252 (19%), Positives = 87/252 (34%), Gaps = 72/252 (28%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE---KEFKAE--VNGIGQTH--HKNL 561
           LG G F TV+  + ++     VA+K + S    +E    E +    V          + +
Sbjct: 45  LGWGHFSTVWLSW-DIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMV 103

Query: 562 VRLLGYCD----EGQNRLLVYEFMSNGTVASFL---FGDSKPNWKLRTEIAMGIAGGLFY 614
           V+LL         G +  +V+E + +  +  ++        P   ++ +I   +  GL Y
Sbjct: 104 VQLLDDFKISGVNGTHICMVFEVLGH-HLLKWIIKSNYQGLPLPCVK-KIIQQVLQGLDY 161

Query: 615 LHEECCTQIIHCDIKPQNILL--DDHY--------------------------------- 639
           LH +C  +IIH DIKP+NILL  ++ Y                                 
Sbjct: 162 LHTKC--RIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGN 219

Query: 640 --------------NARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVD 685
                           +I+D G A  +        T    T+ Y + E           D
Sbjct: 220 FLVNPLEPKNAEKLKVKIADLGNACWV----HKHFTEDIQTRQYRSLEVLIGSGYNTPAD 275

Query: 686 VYSYGVLLLEII 697
           ++S   +  E+ 
Sbjct: 276 IWSTACMAFELA 287

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 59.3 bits (144), Expect = 2e-09
 Identities = 53/233 (22%), Positives = 88/233 (37%), Gaps = 66/233 (28%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVK--KLNSVFQDSEKEFKAEVNGIGQT------HH 558
            ++G G FG V     ++ +  + AVK  +    +  S K    E + I +       ++
Sbjct: 41  RKMGDGTFGRVLLCQ-HIDNKKYYAVKVVRNIKKYTRSAKI---EAD-ILKKIQNDDINN 95

Query: 559 KNLVRLLGYCD---------E--GQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG 607
            N+V+  G            E  G +   +YE ++      F          ++    + 
Sbjct: 96  NNIVKYHGKFMYYDHMCLIFEPLGPS---LYEIITRNNYNGF------HIEDIK-LYCIE 145

Query: 608 IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNA-------------------------R 642
           I   L YL +     + H D+KP+NILLDD Y                           +
Sbjct: 146 ILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIK 202

Query: 643 ISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLE 695
           + DFG A   T    +  + I  T+ Y APE   N+   V  D++S+G +L E
Sbjct: 203 LIDFGCA---TFKSDYHGSIIN-TRQYRAPEVILNLGWDVSSDMWSFGCVLAE 251

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 58.5 bits (142), Expect = 2e-09
 Identities = 36/153 (23%), Positives = 66/153 (43%), Gaps = 18/153 (11%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVK--KLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           +++G G FG +  G  N+ ++ +VA+K   + S       E++             + ++
Sbjct: 15  KKIGCGNFGELRLG-KNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDG---IPQV 70

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYLHEECCTQ 622
             +   G+   +V E +  G     LF      + L+T   IA+ +   + Y+H +    
Sbjct: 71  YYFGPCGKYNAMVLELL--GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNL-- 126

Query: 623 IIHCDIKPQNILLDDHYNAR-----ISDFGLAK 650
            I+ D+KP+N L+    N       I DF LAK
Sbjct: 127 -IYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 58.7 bits (141), Expect = 2e-09
 Identities = 27/204 (13%), Positives = 53/204 (25%), Gaps = 51/204 (25%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKL--------NSVFQDSEKEFKAEV-------- 550
           E++G G FG V++   +      VA+K +        N   Q + +E   E+        
Sbjct: 26  EKIGEGVFGEVFQTIADHTP---VAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSL 82

Query: 551 -NGIGQTHHKNLVRLLGYC-----------------------------DEGQNRLLVYEF 580
            +G      +  + L                                     ++L +   
Sbjct: 83  LSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLE 142

Query: 581 MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYN 640
              G +          +      I   +   L         +  H D+   N+LL     
Sbjct: 143 FEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASL--RFEHRDLHWGNVLLKKTSL 200

Query: 641 ARISDFGLAKLLTLDQSHTNTAIR 664
            ++      K  T+       +I 
Sbjct: 201 KKLHYTLNGKSSTIPSCGLQVSII 224

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112

 Score = 54.2 bits (130), Expect = 3e-09
 Identities = 28/132 (21%), Positives = 47/132 (35%), Gaps = 27/132 (20%)

Query: 148 TDTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWSN 207
           +D L     ++ GG ++          G + F +  D N VL   N           W++
Sbjct: 1   SDRLNSGHQLDTGGSLAE---------GGYLFIIQNDCNLVLYDNN--------RAVWAS 43

Query: 208 TFDTNRSNAGYRVVFNESGQLYVLRENKQRASLVPETVSAKENYLRATLNFDGVFIFYSH 267
              TN   +G  +     G L +   +  RA     T     NY    L  D   + Y  
Sbjct: 44  --GTNGKASGCVLKMQNDGNLVIY--SGSRAIWASNTNRQNGNY-YLILQRDRNVVIY-- 96

Query: 268 PKNNSTGDAIWS 279
              +++ +AIW+
Sbjct: 97  ---DNSNNAIWA 105

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A Length = 112

 Score = 40.3 bits (94), Expect = 3e-04
 Identities = 22/120 (18%), Positives = 40/120 (33%), Gaps = 17/120 (14%)

Query: 25  TISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAVNP 84
            ++ G QL    S          +     Q D        + Y          +AS  N 
Sbjct: 3   RLNSGHQLDTGGS-----LAEGGYLFII-QNDCN-----LVLYDN----NRAVWASGTNG 47

Query: 85  APRGSKLRLTANRGLVLEDPEGREIWKSEISTGQAAFG-VLYDTGNFLIVNTNSERLWQS 143
              G  L++  +  LV+     R IW S  +     +  +L    N +I + ++  +W +
Sbjct: 48  KASGCVLKMQNDGNLVIYSG-SRAIWASNTNRQNGNYYLILQRDRNVVIYDNSNNAIWAT 106

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 56.6 bits (137), Expect = 8e-09
 Identities = 43/178 (24%), Positives = 70/178 (39%), Gaps = 26/178 (14%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVK--KLNSVFQDSEKEFKA--EVNGIGQTHHKNLV 562
            ++G G+FG +Y G  ++ +   VA+K   + +       E K    + G        + 
Sbjct: 15  RKIGSGSFGDIYLG-TDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGG-----VGIP 68

Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYLHEECC 620
            +     EG   ++V E +  G     LF      + L+T   +A  +   + Y+H    
Sbjct: 69  TIRWCGAEGDYNVMVMELL--GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS--- 123

Query: 621 TQIIHCDIKPQNILL---DDHYNARISDFGLAKLLTLDQSHT------NTAIRGTKGY 669
              IH D+KP N L+          I DFGLAK     ++H       N  + GT  Y
Sbjct: 124 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARY 181

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 55.1 bits (133), Expect = 3e-08
 Identities = 33/153 (21%), Positives = 65/153 (42%), Gaps = 18/153 (11%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVK--KLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
             +G G+FG +++G  N+ ++  VA+K     S       E++      G T    +  +
Sbjct: 16  RRIGEGSFGVIFEG-TNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTG---IPNV 71

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYLHEECCTQ 622
             +  EG + +LV + +  G     L       + ++T    A  +   +  +HE+    
Sbjct: 72  YYFGQEGLHNVLVIDLL--GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS--- 126

Query: 623 IIHCDIKPQNILLDDHYNAR-----ISDFGLAK 650
           +++ DIKP N L+    +       + DFG+ K
Sbjct: 127 LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 53.9 bits (129), Expect = 1e-07
 Identities = 44/178 (24%), Positives = 72/178 (40%), Gaps = 26/178 (14%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVK--KLNSVFQDSEKEFKA--EVNGIGQTHHKNLV 562
            ++G G+FG +Y G  N+ ++  VA+K   + +       E K    + G        + 
Sbjct: 13  RKIGSGSFGEIYLG-TNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGG-----TGIP 66

Query: 563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFYLHEECC 620
            +  +  EG   +LV + +  G     LF        L+T   +A  +   + ++H +  
Sbjct: 67  NVRWFGVEGDYNVLVMDLL--GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKS- 123

Query: 621 TQIIHCDIKPQNILLDDHYNAR---ISDFGLAKLLTLDQSHT------NTAIRGTKGY 669
              +H DIKP N L+     A    I DFGLAK      +H       N  + GT  Y
Sbjct: 124 --FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARY 179

>1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109

 Score = 48.7 bits (116), Expect = 3e-07
 Identities = 27/123 (21%), Positives = 50/123 (40%), Gaps = 18/123 (14%)

Query: 25  TISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAVNP 84
            ++ G+ L A +S +      + +     Q D        + Y      T VW ++    
Sbjct: 3   LLTNGEGLYAGQSLD-----VEPYHFIM-QEDCN-----LVLYDH---STSVWASNTGIL 48

Query: 85  APRGSKLRLTANRGLVLEDPEGREIWKSEISTGQAAFG-VLYDTGNFLIVNTNSERLWQS 143
             +G K  L ++   V+ D EGR +W S    G   +  VL + GN +I  ++   +W +
Sbjct: 49  GKKGCKAVLQSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVIYGSD---IWST 105

Query: 144 FDH 146
             +
Sbjct: 106 GTY 108

>1kj1_A Lectin I, lecgna 1; BULB lectin, mannose, plant protein; HET: MAN; 2.20A {Allium sativum} SCOP: b.78.1.1 PDB: 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D* Length = 109

 Score = 46.8 bits (111), Expect = 1e-06
 Identities = 25/131 (19%), Positives = 42/131 (32%), Gaps = 28/131 (21%)

Query: 149 DTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWSNT 208
           + L   + +  G  +             + F + ED N VL        + +    W+ +
Sbjct: 2   NLLTNGEGLYAGQSLDV---------EPYHFIMQEDCNLVL--------YDHSTSVWA-S 43

Query: 209 FDTNRSNAGYRVVFNESGQLYVLRENKQRASLVPETVSAKENYLRATLNFDGVFIFYSHP 268
                   G + V    G   V+ + + R+     +V    NY    L  DG  + Y   
Sbjct: 44  NTGILGKKGCKAVLQSDGNF-VVYDAEGRSLWASHSVRGNGNY-VLVLQEDGNVVIY--- 98

Query: 269 KNNSTGDAIWS 279
                G  IWS
Sbjct: 99  -----GSDIWS 104

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A* Length = 115

 Score = 47.2 bits (112), Expect = 9e-07
 Identities = 24/131 (18%), Positives = 42/131 (32%), Gaps = 29/131 (22%)

Query: 149 DTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWSNT 208
           + LL  QT+     + +         G +   +    N V         +      W++ 
Sbjct: 3   NVLLSGQTLHADHSLQA---------GAYTLTIQNKCNLVK--------YQNGRQIWAS- 44

Query: 209 FDTNRSNAGYRVVFNESGQLYVLRENKQRASLVPETVSAKENYLRATLNFDGVFIFYSHP 268
            +T+R  +G R+     G L V+ ++                Y    L  DG F+ Y   
Sbjct: 45  -NTDRRGSGCRLTLLSDGNL-VIYDHNNNDVWGSACWGDNGKY-ALVLQKDGRFVIY--- 98

Query: 269 KNNSTGDAIWS 279
                G  +WS
Sbjct: 99  -----GPVLWS 104

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 51.0 bits (121), Expect = 2e-06
 Identities = 77/502 (15%), Positives = 141/502 (28%), Gaps = 152/502 (30%)

Query: 325 FSLLDPDDAYGSCKPDFILGCEEDGKKSGEDLYYIEELRNTDWPTSDYEQISPYGKDECV 384
           F   +    Y      F    E+    +  D   ++++  +     + + I      + V
Sbjct: 9   FETGEHQYQYKDILSVF----EDAFVDN-FDCKDVQDMPKSILSKEEIDHI--IMSKDAV 61

Query: 385 SS------CLKDCQCSAA------VLRDDTCWKKKLPLSYGKTDRDETGTTFI--KIRKV 430
           S        L   Q          VLR +          Y           F+   I+  
Sbjct: 62  SGTLRLFWTLLSKQEEMVQKFVEEVLRIN----------YK----------FLMSPIKTE 101

Query: 431 PSGGKKKVDVLIPVVSVLFGSSALINLLLVSACCLGFLVVNRKKFMRPHQEDQGVSYMNL 490
                    + I     L+  + +     VS               R         Y+ L
Sbjct: 102 QRQPSMMTRMYIEQRDRLYNDNQVFAKYNVS---------------RLQP------YLKL 140

Query: 491 RCFTYKELVEVTRGFKEELGRGAFGTVY--KGFVNMGSSNHVAVKKLNSVFQDSEKEFKA 548
           R    + L         EL       +    G    G +          V    + + K 
Sbjct: 141 R----QAL--------LELRPAKNVLIDGVLGS---GKTWVAL-----DVCLSYKVQCKM 180

Query: 549 EVNGIGQTHHKNLVRLLGYCDEGQNRL-----LVYEFMSNGTVASFLFGDSKPNWKLRTE 603
           +   I      NL      C+  +  L     L+Y+   N T  S    D   N KLR  
Sbjct: 181 D-FKI---FWLNL----KNCNSPETVLEMLQKLLYQIDPNWTSRS----DHSSNIKLRIH 228

Query: 604 IAMGIAGGLFYL--HEECCTQIIHCDIKPQNILLDDHYNARISD-FGL-AKLL--TLDQS 657
                   L     +E C             ++L +  NA+  + F L  K+L  T  + 
Sbjct: 229 SIQAELRRLLKSKPYENCL------------LVLLNVQNAKAWNAFNLSCKILLTTRFKQ 276

Query: 658 HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLL--LEIIC--LRRNIDNEISKVD-- 711
            T+     T  +++ +   +M +T         +LL  L+     L R    E+   +  
Sbjct: 277 VTDFLSAATTTHISLD-HHSMTLT---PDEVKSLLLKYLDCRPQDLPR----EVLTTNPR 328

Query: 712 -----KAILTDWA--YDRYQERTLEAL---VENDLEAMNNVTMLHRFVMVA-FWCIQEDP 760
                   + D    +D ++    + L   +E+ L  +        F  ++ F       
Sbjct: 329 RLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVF---PPS- 384

Query: 761 SHRPTMRKVTQML--EGVVEVP 780
           +H PT   +  ++  + +    
Sbjct: 385 AHIPT--ILLSLIWFDVIKSDV 404

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 3e-04
 Identities = 50/355 (14%), Positives = 98/355 (27%), Gaps = 96/355 (27%)

Query: 26  ISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIW--YYKIPSKTIVWYASAVN 83
             +   L+AA +T          ++     + K L L  +      +P +         N
Sbjct: 275 KQVTDFLSAATTTHI---SLDHHSMTLTPDEVKSLLLKYLDCRPQDLPRE-----VLTTN 326

Query: 84  PAPRGSKLRLTANRGLVLEDPEGR-EIWKSEISTGQAAFGVLYDTGNFLI---VNT-NSE 138
           P       R  +     + D     + WK           V  D    +I   +N     
Sbjct: 327 P-------RRLSIIAESIRDGLATWDNWKH----------VNCDKLTTIIESSLNVLEPA 369

Query: 139 RLWQSFDH----PTDTLLPTQTME-------------------RGGVVSSRRKDTYFSRG 175
              + FD     P    +PT  +                    +  +V  + K++  S  
Sbjct: 370 EYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIP 429

Query: 176 RFQFRLLE--DGNAVLNTINLESGFAYDAYFWSNTFDTNRSNAGYRVVFNESGQLYVLR- 232
                L    +    L+   ++       +   +          Y   ++  G  + L+ 
Sbjct: 430 SIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQ--Y--FYSHIG--HHLKN 483

Query: 233 -ENKQRASLVPETVSAKENYLRATLNFDGVFIFYSHPKNNSTGDAIWSVSDVLP------ 285
            E+ +R +L          +    L+F   F+     K      A  +   +L       
Sbjct: 484 IEHPERMTLFRMV------F----LDFR--FL---EQKIRHDSTAWNASGSILNTLQQLK 528

Query: 286 ---ENICINNDIRKGLGSGICGFNSICS---ISGAKRPICQCPKGFSLLDPDDAY 334
                IC N+   + L + I  F        I      + +     +L+  D+A 
Sbjct: 529 FYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLR----IALMAEDEAI 579

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 49.7 bits (119), Expect = 2e-06
 Identities = 36/186 (19%), Positives = 65/186 (34%), Gaps = 35/186 (18%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS---EKEFK-----AEVNGIGQTHHKN 560
           +G G FG +Y            A   +   +Q++     E K     A+ + I +   + 
Sbjct: 45  IGSGGFGLIYLA-FPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERK 103

Query: 561 LVRLLG-----YC-----DEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGI 608
            +  LG                 R +V E +  G     +       +K  T  ++ + +
Sbjct: 104 QLDYLGIPLFYGSGLTEFKGRSYRFMVMERL--GIDLQKIS-GQNGTFKKSTVLQLGIRM 160

Query: 609 AGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARI--SDFGLAKLLTLDQSH------TN 660
              L Y+HE      +H DIK  N+LL      ++  +D+GL+     + +H        
Sbjct: 161 LDVLEYIHENE---YVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPR 217

Query: 661 TAIRGT 666
               GT
Sbjct: 218 KGHNGT 223

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236

 Score = 48.8 bits (115), Expect = 2e-06
 Identities = 35/253 (13%), Positives = 62/253 (24%), Gaps = 59/253 (23%)

Query: 65  IWYYKIPSKTIVWYASAVNPAPRGS-KLRLTANRGLVLEDPEGREIWKSEISTGQAAFGV 123
           I +      +      A       S +  + ++  LVL D     +W S  +       V
Sbjct: 3   ILFGLSHEGSHPQTLHAAQSLELSSFRFTMQSDCNLVLFD-SDVRVWASNTAGATGCRAV 61

Query: 124 LYDTGNFLIVNTNSERLWQS-------------------------------------FDH 146
           L   G  +I+   +   W S                                        
Sbjct: 62  LQSDGLLVILTAQNTIRWSSGTKGSIGNYVLVLQPDRTVTIYGPGLWDSGTSNKGSVVVA 121

Query: 147 PTDTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWS 206
                +   T        +           ++  +  D N VL          +D     
Sbjct: 122 NNGNSILYSTQGNDNHPQTLHATQSLQLSPYRLSMETDCNLVL----------FDRDDRV 171

Query: 207 NTFDTNRSNAGYRVVFNESGQLYVLRENKQRASLVPETVSAKENYLRATLNFDGVFIFYS 266
            + +T     G R V   +G++  +  N+  A        +   Y    L  D     Y 
Sbjct: 172 WSTNTAGKGTGCRAVLQPNGRM-DVLTNQNIAVWTSGNSRSAGRY-VFVLQPDRNLAIY- 228

Query: 267 HPKNNSTGDAIWS 279
                  G A+W+
Sbjct: 229 -------GGALWT 234

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1 Length = 236

 Score = 41.1 bits (95), Expect = 7e-04
 Identities = 21/145 (14%), Positives = 38/145 (26%), Gaps = 37/145 (25%)

Query: 63  PAIWYYKIPSKTIVWYASAVNPAPRGSKLRLTANRGLVLEDPEGREIWKSE-ISTGQAAF 121
             ++  +          +  +      +L +  +  LVL D     +W +     G    
Sbjct: 126 SILYSTQGNDNHPQTLHATQSLQLSPYRLSMETDCNLVLFDR-DDRVWSTNTAGKGTGCR 184

Query: 122 GVLYDTGNFLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRL 181
            VL   G   ++   +  +W S                             S GR+ F L
Sbjct: 185 AVLQPNGRMDVLTNQNIAVWTS-------------------------GNSRSAGRYVFVL 219

Query: 182 LEDGNAVLNTINLESGFAYDAYFWS 206
             D N  +          Y    W+
Sbjct: 220 QPDRNLAI----------YGGALWT 234

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 47.0 bits (112), Expect = 1e-05
 Identities = 30/187 (16%), Positives = 65/187 (34%), Gaps = 34/187 (18%)

Query: 509 LGRGAFGTVYKGF-------VNMGSSNHVAVK------KLNSVFQDSEKEFKA-EVNGIG 554
             R   G +Y+          +       ++K      +L +     ++  K  +VN   
Sbjct: 50  QTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWK 109

Query: 555 QTHHKNLV---RLLGY-CDEGQNRLLVYEFMSNGTVASFLFGDS-KPNWKLRT--EIAMG 607
           + +   L+     +G+   + + R LV   +  G         S K     R+  ++A  
Sbjct: 110 KLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL--GRSLQSALDVSPKHVLSERSVLQVACR 167

Query: 608 IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARI--SDFGLAKLLTLDQSH------T 659
           +   L +LHE      +H ++  +NI +D    +++  + +G A        H      +
Sbjct: 168 LLDALEFLHENE---YVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGS 224

Query: 660 NTAIRGT 666
            +   G 
Sbjct: 225 RSPHEGD 231

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Length = 109

 Score = 42.6 bits (100), Expect = 4e-05
 Identities = 25/131 (19%), Positives = 43/131 (32%), Gaps = 29/131 (22%)

Query: 149 DTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWSNT 208
           + L   +T+  G  +++         GR+ F + ED N VL  ++           W+  
Sbjct: 2   NILYSGETLSPGEFLNN---------GRYVFIMQEDCNLVLYDVD--------KPIWAT- 43

Query: 209 FDTNRSNAGYRVVFNESGQLYVLRENKQRASLVPETVSAKENYLRATLNFDGVFIFYSHP 268
            +T   +    +     G L V+   +        T     NY    L  D   + Y   
Sbjct: 44  -NTGGLDRRCHLSMQSDGNL-VVYSPRNNPIWASNTGGENGNY-VCVLQKDRNVVIY--- 97

Query: 269 KNNSTGDAIWS 279
                G A W+
Sbjct: 98  -----GTARWA 103

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A* Length = 109

 Score = 39.9 bits (93), Expect = 3e-04
 Identities = 22/122 (18%), Positives = 38/122 (31%), Gaps = 19/122 (15%)

Query: 23  NGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAV 82
           +  +  G+ L+  E        +  +     Q D        +  Y       +W A+  
Sbjct: 1   DNILYSGETLSPGEF-----LNNGRYVFIM-QEDCN------LVLYD--VDKPIW-ATNT 45

Query: 83  NPAPRGSKLRLTANRGLVLEDPEGREIWKSEISTGQAAFG-VLYDTGNFLIVNTNSERLW 141
               R   L + ++  LV+  P    IW S        +  VL    N +I  T     W
Sbjct: 46  GGLDRRCHLSMQSDGNLVVYSPRNNPIWASNTGGENGNYVCVLQKDRNVVIYGTA---RW 102

Query: 142 QS 143
            +
Sbjct: 103 AT 104

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 109

 Score = 42.5 bits (100), Expect = 4e-05
 Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 32/132 (24%)

Query: 148 TDTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWSN 207
           T+ LL  QT++  G + +         G F   + +D N VL          Y+   W +
Sbjct: 3   TNYLLSGQTLDTEGHLKN---------GDFDLVMQDDCNLVL----------YNGN-WQS 42

Query: 208 TFDTNRSNAGYRVVFNESGQLYVLRENKQRASLVPETVSAKENYLRATLNFDGVFIFYSH 267
              T  +    ++   + G+L V++             S K NY  A ++ DG  + +  
Sbjct: 43  N--TANNGRDCKLTLTDYGEL-VIKNGDGSTVWKSGAQSVKGNY-AAVVHPDGRLVVFGP 98

Query: 268 PKNNSTGDAIWS 279
                   +++ 
Sbjct: 99  --------SVFK 102

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119

 Score = 42.6 bits (100), Expect = 5e-05
 Identities = 24/123 (19%), Positives = 40/123 (32%), Gaps = 15/123 (12%)

Query: 22  SNGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASA 81
                +  Q L A ES E     +  +     Q D        + Y        +W A+ 
Sbjct: 7   KQPDDNHPQILHATESLEIL-FGTHVYRFIM-QTDCN-----LVLYDN---NNPIW-ATN 55

Query: 82  VNPAPRGSKLRLTANRGLVLEDPEGREIWKSEISTGQAAFG-VLYDTGNFLIVNTNSERL 140
                 G +  L  +  LV+   E   +W+S ++     +  VL    N +I       L
Sbjct: 56  TGGLGNGCRAVLQPDGVLVVITNENVTVWQSPVAGKAGHYVLVLQPDRNVVIYGD---AL 112

Query: 141 WQS 143
           W +
Sbjct: 113 WAT 115

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1 Length = 119

 Score = 40.3 bits (94), Expect = 3e-04
 Identities = 22/125 (17%), Positives = 34/125 (27%), Gaps = 39/125 (31%)

Query: 90  KLRLTANRGLVLEDPEGREIWKSE-ISTGQAAFGVLYDTGNFLIVNTNSERLWQSFDHPT 148
           +  +  +  LVL D     IW +     G     VL   G  +++   +  +WQS     
Sbjct: 33  RFIMQTDCNLVLYD-NNNPIWATNTGGLGNGCRAVLQPDGVLVVITNENVTVWQS----- 86

Query: 149 DTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWSNT 208
                                     G +   L  D N V+          Y    W+  
Sbjct: 87  --------------------PVAGKAGHYVLVLQPDRNVVI----------YGDALWAT- 115

Query: 209 FDTNR 213
             T R
Sbjct: 116 -QTVR 119

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A* Length = 110

 Score = 42.1 bits (99), Expect = 5e-05
 Identities = 21/124 (16%), Positives = 39/124 (31%), Gaps = 38/124 (30%)

Query: 87  RGSKLRLTANRGLVLEDPEGREIWKSE-ISTGQAAFGVLYDTGNFLIVNTNSERLWQSFD 145
              +L +  +   VL D  G+ +W S     G      L++ GN +I + ++  +WQ+  
Sbjct: 20  PSYRLIMQGDCNFVLYDS-GKPVWASNTGGLGSGCRLTLHNNGNLVIYDQSNRVIWQT-- 76

Query: 146 HPTDTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFW 205
                                   T      +   L +D N V+          Y    W
Sbjct: 77  -----------------------KTNGKEDHYVLVLQQDRNVVI----------YGPVVW 103

Query: 206 -SNT 208
            + +
Sbjct: 104 ATGS 107

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara} Length = 110

 Score = 41.4 bits (97), Expect = 1e-04
 Identities = 21/133 (15%), Positives = 43/133 (32%), Gaps = 30/133 (22%)

Query: 147 PTDTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWS 206
             + L   Q +   G +++            Q  +  D N VL             Y W 
Sbjct: 5   TNNLLFSGQVLYGDGRLTA---------KNHQLVMQGDCNLVLY---------GGKYGWQ 46

Query: 207 NTFDTNRSNAGYRVVFNESGQLYVLRENKQRASLVPETVSAKENYLRATLNFDGVFIFYS 266
           +  +T+ +     +  N  G+L +++++  +      + S +  Y    L  DG  + Y 
Sbjct: 47  S--NTHGNGEHCFLRLNHKGEL-IIKDDDFKTIWSSRSSSKQGEY-VLILQDDGFGVIYG 102

Query: 267 HPKNNSTGDAIWS 279
                     I+ 
Sbjct: 103 PA--------IFE 107

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 44.0 bits (104), Expect = 1e-04
 Identities = 38/189 (20%), Positives = 69/189 (36%), Gaps = 38/189 (20%)

Query: 509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEK------EFK-----AEVNGIGQTH 557
           +G+G FG +Y    +M SS  V       V  +         E K     A+   I +  
Sbjct: 43  IGQGGFGCIYLA--DMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWI 100

Query: 558 HKNLVRLLG----------YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIA 605
               ++ LG            +    R ++ +    G+    ++  +   +  +T  +++
Sbjct: 101 RTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF--GSDLQKIYEANAKRFSRKTVLQLS 158

Query: 606 MGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARI--SDFGLAKLLTLDQSHT---- 659
           + I   L Y+HE      +H DIK  N+LL+     ++   D+GLA     +  H     
Sbjct: 159 LRILDILEYIHEHE---YVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAA 215

Query: 660 --NTAIRGT 666
                  GT
Sbjct: 216 DPKRCHDGT 224

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 113

 Score = 40.2 bits (94), Expect = 2e-04
 Identities = 23/139 (16%), Positives = 47/139 (33%), Gaps = 33/139 (23%)

Query: 145 DHP--TDTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDA 202
           + P   + L  +Q M     +++           +   + +D N VL             
Sbjct: 1   NIPRVRNVLFSSQVMYDNAQLAT---------RDYSLVMRDDCNLVL----------TKG 41

Query: 203 YFWSNTFDTNRSNAGY--RVVFNESGQLYVLRENKQRASLVPETVSAKENYLRATLNFDG 260
              +  +++  S  G    +    SG+L  + +++     V  TV  + +Y    L  +G
Sbjct: 42  SKTNIVWESGTSGRGQHCFMRLGHSGEL-DITDDRLNTVFVSNTVGQEGDY-VLILQING 99

Query: 261 VFIFYSHPKNNSTGDAIWS 279
             + Y          A+WS
Sbjct: 100 QAVVYGP--------AVWS 110

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} Length = 113

 Score = 40.2 bits (94), Expect = 3e-04
 Identities = 16/124 (12%), Positives = 39/124 (31%), Gaps = 17/124 (13%)

Query: 21  QSNGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYAS 80
           +    +   Q +            ++D++L   + D        +   K     IVW + 
Sbjct: 4   RVRNVLFSSQVMYDNAQ-----LATRDYSLVM-RDDCN------LVLTKGSKTNIVWESG 51

Query: 81  AVNPAPRGSKLRLTANRGLVLEDPEGREIWKSEISTGQAAFG-VLYDTGNFLIVNTNSER 139
                 +   +RL  +  L + D     ++ S     +  +  +L   G  ++       
Sbjct: 52  TSG-RGQHCFMRLGHSGELDITDDRLNTVFVSNTVGQEGDYVLILQINGQAVVYGP---A 107

Query: 140 LWQS 143
           +W +
Sbjct: 108 VWST 111

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	792
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.94
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.91
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.84
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	99.83
4h3o_A	105	Lectin; cadmium, plant protein; 2.17A {Allium sati	99.83
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	99.82
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	99.8
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	99.78
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	99.74
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.71
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	99.65
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	99.64
3a0c_A	110	Mannose/sialic acid-binding lectin; beta-prism II,	99.62
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	99.57
1b2p_A	119	Protein (lectin); mannose-binding lectin, monocot,	99.57
1xd5_A	112	Gastrodianin-1, antifungal protein GAFP-1; monocot	99.56
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.55
2dpf_A	115	Curculin; sweet taste, taste modifying, plant prot	99.51
3mez_A	111	Mannose-specific lectin 3 chain 1; heterotetramer,	99.42
3mez_B	113	Mannose-specific lectin 3 chain 2; heterotetramer,	99.33
3mez_A	111	Mannose-specific lectin 3 chain 1; heterotetramer,	99.3
3m7h_A	276	Putidacin L1; monocot mannose-binding lectin, bact	99.27
3dzw_A	109	Agglutinin; lectin, mannobiose, mannose-alpha1, 3-	99.25
3r0e_B	110	Lectin; carbohydrate binding, carbohydrate, sugar	99.17
1dlp_A	236	Lectin scafet precursor; two-domain lectin, beta p	99.15
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.12
3r0e_A	109	Lectin; carbohydrate binding, carbohydrate, sugar	99.06
4h3o_A	105	Lectin; cadmium, plant protein; 2.17A {Allium sati	99.01
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.92
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.87
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.68
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.26
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.19
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.04
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.0
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	97.99
3ats_A	357	Putative uncharacterized protein; hypothetical pro	97.94
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	97.58
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	97.53
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.42
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.2
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	97.14
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	96.8
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	96.78
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	96.71
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	96.71
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	96.52
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	96.29
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	96.22
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	95.92
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	95.57
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	95.28
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	95.17
3mes_A	424	Choline kinase; malaria, structural genomics, stru	93.7
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	90.23
4ann_A	215	ESSB; membrane protein, membrane secretion, ESS ty	87.88
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	87.44
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	86.82
2ll3_A	82	Micronemal protein 4; cell adhesion; NMR {Toxoplas	85.28

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=5.4e-53  Score=447.91  Aligned_cols=259  Identities=25%  Similarity=0.328  Sum_probs=213.0

Q ss_pred             HHHhhhhhhcCccccceEEEeeec----CCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCce
Q 003836          500 EVTRGFKEELGRGAFGTVYKGFVN----MGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNR  574 (792)
Q Consensus       500 ~~~~~~~~~lG~G~~g~Vy~g~~~----~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~  574 (792)
                      ..+..|.++||+|+||+||+|.+.    ..+++.||||+++... ....++|.+|+.++++++|||||+++|+|.+++..
T Consensus        25 ~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~  104 (308)
T 4gt4_A           25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPL  104 (308)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEE
Confidence            344567889999999999999873    2345789999997543 33457899999999999999999999999999999


Q ss_pred             EEEEEeccCCCccccccCC----------------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC
Q 003836          575 LLVYEFMSNGTVASFLFGD----------------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH  638 (792)
Q Consensus       575 ~lV~E~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~  638 (792)
                      +||||||++|+|.++|...                ..++|..+.+|+.|||+||+|||++   +||||||||+||||+++
T Consensus       105 ~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~  181 (308)
T 4gt4_A          105 SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDK  181 (308)
T ss_dssp             EEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGG
T ss_pred             EEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCC
Confidence            9999999999999999642                3578999999999999999999998   99999999999999999


Q ss_pred             CCeEEeecCCCccccCCCC-CccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHH
Q 003836          639 YNARISDFGLAKLLTLDQS-HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILT  716 (792)
Q Consensus       639 ~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~  716 (792)
                      +.+||+|||+++....... .......||+.|||||++.+..++.++|||||||+||||+| |+.||.......      
T Consensus       182 ~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~------  255 (308)
T 4gt4_A          182 LNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD------  255 (308)
T ss_dssp             GCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHH------
T ss_pred             CCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHH------
Confidence            9999999999997654332 23345679999999999999999999999999999999998 889997543211      


Q ss_pred             HHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          717 DWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                                 +...+........+...+.++.+|+.+||+.||++||||+||+++|+....
T Consensus       256 -----------~~~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~n  306 (308)
T 4gt4_A          256 -----------VVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWGN  306 (308)
T ss_dssp             -----------HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCC
T ss_pred             -----------HHHHHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhccC
Confidence                       011111222223344566788999999999999999999999999987543

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.5e-52  Score=448.69  Aligned_cols=256  Identities=24%  Similarity=0.401  Sum_probs=207.0

Q ss_pred             hhhhcCccccceEEEeeecC----CCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          505 FKEELGRGAFGTVYKGFVNM----GSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~----~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      +.++||+|+||+||+|.+..    .+++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..+|||||
T Consensus        45 l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey  124 (329)
T 4aoj_A           45 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEY  124 (329)
T ss_dssp             EEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             EEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            45789999999999998642    35678999999877666778899999999999999999999999999999999999


Q ss_pred             ccCCCccccccCC---------------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEee
Q 003836          581 MSNGTVASFLFGD---------------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISD  645 (792)
Q Consensus       581 ~~~gsL~~~l~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~D  645 (792)
                      |++|+|.++|+..               ..++|.++++|+.|||+||+|||++   +||||||||+||||++++.+||+|
T Consensus       125 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~Ki~D  201 (329)
T 4aoj_A          125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGD  201 (329)
T ss_dssp             CTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECC
T ss_pred             CCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcEEEcc
Confidence            9999999998653               3589999999999999999999998   999999999999999999999999


Q ss_pred             cCCCccccCCCC-CccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhh
Q 003836          646 FGLAKLLTLDQS-HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRY  723 (792)
Q Consensus       646 fg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~  723 (792)
                      ||+++....... .......||+.|||||++.+..++.++|||||||+||||+| |+.||........   +        
T Consensus       202 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~---~--------  270 (329)
T 4aoj_A          202 FGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA---I--------  270 (329)
T ss_dssp             CC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHH---H--------
T ss_pred             cccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHH---H--------
Confidence            999997654332 22344679999999999999999999999999999999999 8999975432110   0        


Q ss_pred             cccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCCC
Q 003836          724 QERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP  780 (792)
Q Consensus       724 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~~  780 (792)
                            ..+....+...+...++++.+|+.+||+.||++||||+||+++|+.+.+.|
T Consensus       271 ------~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p  321 (329)
T 4aoj_A          271 ------DCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP  321 (329)
T ss_dssp             ------HHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred             ------HHHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence                  011111122234445678899999999999999999999999999987654

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=1.2e-52  Score=443.35  Aligned_cols=254  Identities=24%  Similarity=0.405  Sum_probs=210.9

Q ss_pred             hhhhcCccccceEEEeeecC----CCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          505 FKEELGRGAFGTVYKGFVNM----GSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~----~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      +.++||+|+||+||+|.+..    .+++.||||+++.......++|.+|++++++++|||||+++|+|.+++..+|||||
T Consensus        17 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey   96 (299)
T 4asz_A           17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEY   96 (299)
T ss_dssp             EEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             EeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEc
Confidence            55789999999999998642    34678999999877666778899999999999999999999999999999999999


Q ss_pred             ccCCCccccccCC-------------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecC
Q 003836          581 MSNGTVASFLFGD-------------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFG  647 (792)
Q Consensus       581 ~~~gsL~~~l~~~-------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg  647 (792)
                      |++|+|.++|+..             ..++|.++++|+.|||+||+|||++   +|+||||||+||||++++.+||+|||
T Consensus        97 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki~DFG  173 (299)
T 4asz_A           97 MKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFG  173 (299)
T ss_dssp             CTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCS
T ss_pred             CCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEECCcc
Confidence            9999999999643             3689999999999999999999998   99999999999999999999999999


Q ss_pred             CCccccCCCCC-ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcc
Q 003836          648 LAKLLTLDQSH-TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQE  725 (792)
Q Consensus       648 ~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~  725 (792)
                      +|+........ ......||+.|||||.+.+..++.|+|||||||+||||+| |+.||.......   .+          
T Consensus       174 la~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~---~~----------  240 (299)
T 4asz_A          174 MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE---VI----------  240 (299)
T ss_dssp             CHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH---HH----------
T ss_pred             cceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH---HH----------
Confidence            99876543332 2234568999999999999999999999999999999999 899997543211   00          


Q ss_pred             cchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          726 RTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       726 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                          ..+........+...++++.+|+.+||+.||++||||+||++.|+++.+
T Consensus       241 ----~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~  289 (299)
T 4asz_A          241 ----ECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK  289 (299)
T ss_dssp             ----HHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ----HHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence                0111111122344556788999999999999999999999999988654

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=4.7e-51  Score=431.08  Aligned_cols=253  Identities=27%  Similarity=0.405  Sum_probs=199.1

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.++||+|+||+||+|++.    ..||||+++...  ....+.|.+|++++++++|||||+++|+|.+ +..+||||||+
T Consensus        40 l~~~iG~G~fG~Vy~~~~~----~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~  114 (307)
T 3omv_A           40 LSTRIGSGSFGTVYKGKWH----GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCE  114 (307)
T ss_dssp             EEEECCCCSSSEEEEEESS----SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCS
T ss_pred             EeeEEeeCCCcEEEEEEEC----CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCC
Confidence            5678999999999999764    259999987533  3345789999999999999999999999865 56899999999


Q ss_pred             CCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC-Ccc
Q 003836          583 NGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS-HTN  660 (792)
Q Consensus       583 ~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~-~~~  660 (792)
                      +|+|.++|+.. ..+++.++.+|+.|||+||+|||++   +||||||||+||||++++.+||+|||+|+....... ...
T Consensus       115 gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~  191 (307)
T 3omv_A          115 GSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQV  191 (307)
T ss_dssp             SCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC----------
T ss_pred             CCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCCcceee
Confidence            99999999764 5799999999999999999999998   999999999999999999999999999987654332 233


Q ss_pred             ccccccCCccccccccc---CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhc
Q 003836          661 TAIRGTKGYVAPEWFRN---MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLE  737 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~---~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  737 (792)
                      ....||+.|||||++.+   ..|+.|+|||||||+||||+||+.||........   +.........        .+.. 
T Consensus       192 ~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~---~~~~~~~~~~--------~p~~-  259 (307)
T 3omv_A          192 EQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ---IIFMVGRGYA--------SPDL-  259 (307)
T ss_dssp             --CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH---HHHHHHTTCC--------CCCS-
T ss_pred             cccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH---HHHHHhcCCC--------CCCc-
Confidence            45679999999999863   4699999999999999999999999975432111   0000000000        0111 


Q ss_pred             ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          738 AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       738 ~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      ...+...++.+.+|+.+||+.||++||||.||+++|+.+.
T Consensus       260 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~  299 (307)
T 3omv_A          260 SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ  299 (307)
T ss_dssp             TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred             ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence            1122345677889999999999999999999999997653

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=1.7e-49  Score=416.11  Aligned_cols=244  Identities=27%  Similarity=0.415  Sum_probs=197.2

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceecc----CCceEEEE
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDE----GQNRLLVY  578 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~----~~~~~lV~  578 (792)
                      |.++||+|+||+||+|... .+++.||+|++....  ....+.|.+|++++++++|||||++++++.+    .+..+|||
T Consensus        30 ~~~~iG~G~fg~Vy~a~~~-~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           30 FDIEIGRGSFKTVYKGLDT-ETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEECSSEEEEEEEET-TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             eeeEEecCcCcEEEEEEEC-CCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            4567999999999999754 567899999986532  3345679999999999999999999999864    35689999


Q ss_pred             EeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCC--eEecCCCCCcEEEc-CCCCeEEeecCCCccccCC
Q 003836          579 EFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ--IIHCDIKPQNILLD-DHYNARISDFGLAKLLTLD  655 (792)
Q Consensus       579 E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivH~dikp~NILl~-~~~~~kl~Dfg~a~~~~~~  655 (792)
                      |||++|+|.+++.+...+++..+..|+.||+.||+|||++   +  |+||||||+||||+ .++.+||+|||+|+.... 
T Consensus       109 Ey~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~---~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~-  184 (290)
T 3fpq_A          109 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA-  184 (290)
T ss_dssp             ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT-
T ss_pred             eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC-
Confidence            9999999999998888899999999999999999999998   6  99999999999998 479999999999986432 


Q ss_pred             CCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          656 QSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       656 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                        ......+||+.|||||++.+ .++.++|||||||+||||+||+.||........   +    .........       
T Consensus       185 --~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~---~----~~~i~~~~~-------  247 (290)
T 3fpq_A          185 --SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ---I----YRRVTSGVK-------  247 (290)
T ss_dssp             --TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH---H----HHHHTTTCC-------
T ss_pred             --CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHH---H----HHHHHcCCC-------
Confidence              23345689999999998865 699999999999999999999999965322111   0    011111100       


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                       ....+...++++.+|+.+||+.||++|||++|+++
T Consensus       248 -~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          248 -PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             -CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             -CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence             00111123356889999999999999999999987

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=1.9e-49  Score=422.82  Aligned_cols=259  Identities=22%  Similarity=0.233  Sum_probs=209.1

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCC
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNG  584 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~g  584 (792)
                      +.++||+|+||+||+|.. ..+++.||||+++...     ...+|+.++++++|||||++++++.+++..+||||||++|
T Consensus        62 ~~~~lG~G~fG~Vy~a~~-~~~g~~vAiK~i~~~~-----~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg  135 (336)
T 4g3f_A           62 HQPRVGRGSFGEVHRMKD-KQTGFQCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGG  135 (336)
T ss_dssp             EEEEEEEETTEEEEEEEE-TTTCCEEEEEEEETTT-----CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTC
T ss_pred             eCcEeccCCCeEEEEEEE-CCCCCEEEEEEECHHH-----hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCC
Confidence            346799999999999975 4567899999997532     2357999999999999999999999999999999999999


Q ss_pred             CccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCC-CeEEeecCCCccccCCCCC----c
Q 003836          585 TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY-NARISDFGLAKLLTLDQSH----T  659 (792)
Q Consensus       585 sL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~-~~kl~Dfg~a~~~~~~~~~----~  659 (792)
                      +|.++|.....+++..+..++.||+.||+|||++   +||||||||+||||+.++ .+||+|||+|+.+..+...    .
T Consensus       136 ~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~  212 (336)
T 4g3f_A          136 SLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT  212 (336)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC-----------
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceec
Confidence            9999998888899999999999999999999998   999999999999999987 6999999999987543321    1


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh-cc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL-EA  738 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  738 (792)
                      ...++||+.|||||++.+..++.++|||||||++|||+||+.||........   +..             +..... ..
T Consensus       213 ~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~---~~~-------------i~~~~~~~~  276 (336)
T 4g3f_A          213 GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL---CLK-------------IASEPPPIR  276 (336)
T ss_dssp             -CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC---HHH-------------HHHSCCGGG
T ss_pred             CCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH---HHH-------------HHcCCCCch
Confidence            2345799999999999999999999999999999999999999975432211   100             111100 01


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc-CCCCCCCCCCC
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV-EVPIPPCPWTL  788 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~-~~~~p~~P~~~  788 (792)
                      ..+...+..+.+++.+||+.||++|||+.|+++.|...+ ++..-.+||..
T Consensus       277 ~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~  327 (336)
T 4g3f_A          277 EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKG  327 (336)
T ss_dssp             GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSS
T ss_pred             hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcC
Confidence            123345678889999999999999999999999887643 34445567654

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=2e-49  Score=423.91  Aligned_cols=246  Identities=23%  Similarity=0.319  Sum_probs=206.4

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCC
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNG  584 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~g  584 (792)
                      +.++||+|+||+||+|.. ..+++.||||++........+.+.+|+++|++++|||||++++++.+++..+||||||++|
T Consensus        78 ~~~~iG~G~fG~V~~a~~-~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg  156 (346)
T 4fih_A           78 NFIKIGEGSTGIVCIATV-RSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG  156 (346)
T ss_dssp             EEEEEEECSSCEEEEEEE-TTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTE
T ss_pred             EeEEeecCcCeEEEEEEE-CCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCC
Confidence            446799999999999975 4567899999998766666778999999999999999999999999999999999999999


Q ss_pred             CccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccccc
Q 003836          585 TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIR  664 (792)
Q Consensus       585 sL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  664 (792)
                      +|.+++.. ..+++..+..++.||+.||+|||++   +|+||||||+||||+.++.+||+|||+|+.+..... .....+
T Consensus       157 ~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~-~~~~~~  231 (346)
T 4fih_A          157 ALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RRKSLV  231 (346)
T ss_dssp             EHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-CBCCCC
T ss_pred             cHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCC-cccccc
Confidence            99999865 5689999999999999999999999   999999999999999999999999999997654322 334568


Q ss_pred             ccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch-hcccCCHH
Q 003836          665 GTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND-LEAMNNVT  743 (792)
Q Consensus       665 gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  743 (792)
                      ||+.|||||++.+..|+.++|||||||++|||++|+.||........   +.             .+.+.. ........
T Consensus       232 GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~---~~-------------~i~~~~~~~~~~~~~  295 (346)
T 4fih_A          232 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA---MK-------------MIRDNLPPRLKNLHK  295 (346)
T ss_dssp             SCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH---HH-------------HHHHSSCCCCSCGGG
T ss_pred             cCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH---HH-------------HHHcCCCCCCCcccc
Confidence            99999999999999999999999999999999999999975432211   00             000000 01111223


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          744 MLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       744 ~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .+.++.+|+.+||+.||++|||++|+++.
T Consensus       296 ~s~~~~dli~~~L~~dP~~R~ta~e~l~H  324 (346)
T 4fih_A          296 VSPSLKGFLDRLLVRDPAQRATAAELLKH  324 (346)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             CCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            45678899999999999999999999873

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=3.2e-49  Score=416.02  Aligned_cols=246  Identities=20%  Similarity=0.285  Sum_probs=208.0

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccc---cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV---FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +.+.++||+|+||+||++.. ..+++.||||++.+.   .....+.+.+|++++++++|||||++++++.+.+..+||||
T Consensus        34 y~i~~~lG~G~fg~V~~a~~-~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmE  112 (311)
T 4aw0_A           34 FKFGKILGEGSFSTVVLARE-LATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLS  112 (311)
T ss_dssp             EEEEEEEEEETTEEEEEEEE-TTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cEEEEEEecccCeEEEEEEE-CCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            45668999999999999975 456789999999753   23446789999999999999999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC-C
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS-H  658 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~-~  658 (792)
                      |+++|+|.+++.+...+++.....++.||+.||+|||++   +|+||||||+||||+.++.+||+|||+|+.+..... .
T Consensus       113 y~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~  189 (311)
T 4aw0_A          113 YAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA  189 (311)
T ss_dssp             CCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCC
T ss_pred             cCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcc
Confidence            999999999998888899999999999999999999999   999999999999999999999999999998764433 2


Q ss_pred             ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          659 TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      .....+||+.|||||++.+..++.++||||+||++|||++|+.||........   +             ..+.....  
T Consensus       190 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~---~-------------~~i~~~~~--  251 (311)
T 4aw0_A          190 RANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLI---F-------------AKIIKLEY--  251 (311)
T ss_dssp             CBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---H-------------HHHHHTCC--
T ss_pred             cccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---H-------------HHHHcCCC--
Confidence            34457899999999999999999999999999999999999999975432211   1             01111111  


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHhHH
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVT  770 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl  770 (792)
                      ..+...++++.+|+.+||+.||++|||++|++
T Consensus       252 ~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          252 DFPEKFFPKARDLVEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             CCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred             CCCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence            12233456788999999999999999999863

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=1.2e-49  Score=429.75  Aligned_cols=258  Identities=24%  Similarity=0.347  Sum_probs=210.3

Q ss_pred             HhhhhhhcCccccceEEEeeecC----CCceEEEEEEcccccc-cchHHHHHHHHHhcccC-CCCcccccceeccC-Cce
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNM----GSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTH-HKNLVRLLGYCDEG-QNR  574 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~----~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~-h~niv~l~g~~~~~-~~~  574 (792)
                      .+.+.++||+|+||+||+|.+..    ...+.||||++..... ...+.|.+|+++|.+++ |||||+++|+|.+. +..
T Consensus        65 ~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~  144 (353)
T 4ase_A           65 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL  144 (353)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCC
T ss_pred             HeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEE
Confidence            34556889999999999997643    2346899999976543 34567999999999995 59999999999764 578


Q ss_pred             EEEEEeccCCCccccccCC----------------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC
Q 003836          575 LLVYEFMSNGTVASFLFGD----------------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH  638 (792)
Q Consensus       575 ~lV~E~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~  638 (792)
                      +||||||++|+|.++|+..                ..+++..+..|+.|||+||+|||++   +||||||||+|||++++
T Consensus       145 ~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~  221 (353)
T 4ase_A          145 MVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEK  221 (353)
T ss_dssp             EEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGG
T ss_pred             EEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCccceeeCCC
Confidence            9999999999999999642                3478999999999999999999999   99999999999999999


Q ss_pred             CCeEEeecCCCccccCCCCCc-cccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHH
Q 003836          639 YNARISDFGLAKLLTLDQSHT-NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILT  716 (792)
Q Consensus       639 ~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~  716 (792)
                      +.+||+|||+|+....+.... .....||+.|||||++.+..++.++|||||||+||||+| |+.||........     
T Consensus       222 ~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~-----  296 (353)
T 4ase_A          222 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-----  296 (353)
T ss_dssp             GCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-----
T ss_pred             CCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHH-----
Confidence            999999999999775544332 334679999999999999999999999999999999998 8999965432111     


Q ss_pred             HHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          717 DWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                                 +...+....+...+...++++.+++.+||+.||++|||++||+++|+.+++
T Consensus       297 -----------~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq  347 (353)
T 4ase_A          297 -----------FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  347 (353)
T ss_dssp             -----------HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -----------HHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence                       111122222233344456788999999999999999999999999988764

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=5.9e-49  Score=420.85  Aligned_cols=247  Identities=20%  Similarity=0.305  Sum_probs=198.5

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      |.+.++||+|+||+||+|.. ..+++.||||++....  ....+.+.+|++++++++|||||++++++.+++..+|||||
T Consensus        26 Y~~~~~lG~G~fg~V~~a~~-~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy  104 (350)
T 4b9d_A           26 YVRLQKIGEGSFGKAILVKS-TEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDY  104 (350)
T ss_dssp             EEEEEEC------CEEEEEE-TTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             eEEeEEEecCCCeEEEEEEE-CCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeC
Confidence            44567899999999999975 4567899999997542  33456799999999999999999999999999999999999


Q ss_pred             ccCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          581 MSNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       581 ~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      +++|+|.++|...  ..+++..+..|+.||+.||+|||++   +|+||||||+||||++++.+||+|||+|+...... .
T Consensus       105 ~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~-~  180 (350)
T 4b9d_A          105 CEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV-E  180 (350)
T ss_dssp             CTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH-H
T ss_pred             CCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCCc-c
Confidence            9999999999654  4568889999999999999999999   99999999999999999999999999998764321 1


Q ss_pred             ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          659 TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      .....+||+.|||||++.+..|+.++|||||||+||||++|+.||........   +             ..++.... .
T Consensus       181 ~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~---~-------------~~i~~~~~-~  243 (350)
T 4b9d_A          181 LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNL---V-------------LKIISGSF-P  243 (350)
T ss_dssp             HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---H-------------HHHHHTCC-C
T ss_pred             cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH---H-------------HHHHcCCC-C
Confidence            22346799999999999999999999999999999999999999976432211   1             01111111 1


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ..+...+.++.+|+.+||+.||++|||++|+++
T Consensus       244 ~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          244 PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            122345567899999999999999999999986

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=7.3e-49  Score=417.12  Aligned_cols=267  Identities=22%  Similarity=0.275  Sum_probs=199.3

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCC----ceEEEEEe
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQ----NRLLVYEF  580 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~----~~~lV~E~  580 (792)
                      +.++||+|+||+||+|++.   ++.||||+++... .....++.|+..+.+++|||||+++|+|.+++    ..+|||||
T Consensus         7 L~~~iG~G~fG~Vy~~~~~---g~~VAvK~l~~~~-~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey   82 (303)
T 3hmm_A            7 LQESIGKGRFGEVWRGKWR---GEEVAVKIFSSRE-ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY   82 (303)
T ss_dssp             EEEEEEECSSSEEEEEEET---TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred             EEEEEeeCCCeEEEEEEEC---CEEEEEEEECccc-hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecC
Confidence            4578999999999999863   5789999997532 22334556777888999999999999997654    57999999


Q ss_pred             ccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhcc-----CCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCC
Q 003836          581 MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEEC-----CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD  655 (792)
Q Consensus       581 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~  655 (792)
                      |++|+|.++|+. ..+++..+.+|+.|+++||+|||+++     .++|+||||||+||||++++++||+|||+|+.....
T Consensus        83 ~~~gsL~~~l~~-~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~  161 (303)
T 3hmm_A           83 HEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA  161 (303)
T ss_dssp             CTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETT
T ss_pred             CCCCcHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCC
Confidence            999999999965 46899999999999999999999863     358999999999999999999999999999876544


Q ss_pred             CCC---ccccccccCCcccccccccC------CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHh-hcc
Q 003836          656 QSH---TNTAIRGTKGYVAPEWFRNM------PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDR-YQE  725 (792)
Q Consensus       656 ~~~---~~~~~~gt~~y~aPE~~~~~------~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~  725 (792)
                      ...   ......||+.|||||++.+.      .++.|+|||||||+||||+||+.|+...........  ...... ..+
T Consensus       162 ~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~--~~~~~~~~~~  239 (303)
T 3hmm_A          162 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY--DLVPSDPSVE  239 (303)
T ss_dssp             TTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTT--TTSCSSCCHH
T ss_pred             CCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccch--hcccccchHH
Confidence            332   12345799999999998754      477899999999999999999887753321100000  000000 000


Q ss_pred             cchhHhhhchhcccC-----CHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          726 RTLEALVENDLEAMN-----NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       726 ~~~~~~~~~~~~~~~-----~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                      .....+.....++..     +.+.+..+.+|+.+||+.||++||||.||+++|+.+.+
T Consensus       240 ~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~  297 (303)
T 3hmm_A          240 EMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  297 (303)
T ss_dssp             HHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence            001111222222221     23567789999999999999999999999999987653

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=3.1e-48  Score=424.74  Aligned_cols=248  Identities=23%  Similarity=0.312  Sum_probs=206.9

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      .+.++||+|+||.||+|.. ..+++.||||++........+.+.+|+.+|++++|||||++++++.+.+..|||||||++
T Consensus       154 ~~~~~iG~G~fG~V~~a~~-~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~g  232 (423)
T 4fie_A          154 DNFIKIGEGSTGIVCIATV-RSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG  232 (423)
T ss_dssp             EEEEEEEECSSCEEEEEEE-TTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             EeeeEeccCcCcEEEEEEE-CCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCC
Confidence            3457899999999999975 456789999999876666677899999999999999999999999999999999999999


Q ss_pred             CCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccccc
Q 003836          584 GTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAI  663 (792)
Q Consensus       584 gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  663 (792)
                      |+|.+++.. ..+++..+..|+.||+.||+|||++   +||||||||+||||+.++.+||+|||+|+.+..... .....
T Consensus       233 G~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~-~~~~~  307 (423)
T 4fie_A          233 GALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RRKSL  307 (423)
T ss_dssp             EEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC-CBCCC
T ss_pred             CcHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCCc-ccccc
Confidence            999999864 4689999999999999999999999   999999999999999999999999999997654322 33456


Q ss_pred             cccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHH
Q 003836          664 RGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVT  743 (792)
Q Consensus       664 ~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  743 (792)
                      +||+.|||||++.+..|+.++|||||||++|||++|+.||..........   .     ....     ...  .......
T Consensus       308 ~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~---~-----i~~~-----~~~--~~~~~~~  372 (423)
T 4fie_A          308 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK---M-----IRDN-----LPP--RLKNLHK  372 (423)
T ss_dssp             EECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH---H-----HHHS-----CCC--CCSCTTS
T ss_pred             ccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHH---H-----HHcC-----CCC--CCccccc
Confidence            89999999999999999999999999999999999999997543221100   0     0000     000  0111223


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          744 MLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       744 ~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .+.++.+|+.+||+.||++|||++|+++.
T Consensus       373 ~s~~~~dli~~~L~~dP~~R~ta~ell~H  401 (423)
T 4fie_A          373 VSPSLKGFLDRLLVRDPAQRATAAELLKH  401 (423)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             CCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            45678899999999999999999999873

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=1.1e-47  Score=398.87  Aligned_cols=244  Identities=23%  Similarity=0.391  Sum_probs=191.2

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +.+.+.||+|+||+||+|.. ..+++.||||++.+..   ....+.+.+|++++++++|||||++++++.+.+..++|||
T Consensus        15 Y~i~~~lG~G~fg~V~~~~~-~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE   93 (275)
T 3hyh_A           15 YQIVKTLGEGSFGKVKLAYH-TTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIE   93 (275)
T ss_dssp             CEEEEEEEC---CCEEEEEC-TTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             eEEEEEEecCcCeEEEEEEE-CCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEe
Confidence            45668899999999999964 4567899999997532   2345679999999999999999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      |+ +|+|.+++.....+++.....++.||+.||+|||++   +|+||||||+||||++++.+||+|||+|+.....  ..
T Consensus        94 y~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~--~~  167 (275)
T 3hyh_A           94 YA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--NF  167 (275)
T ss_dssp             CC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC----------
T ss_pred             CC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCC--Cc
Confidence            99 679999998888999999999999999999999999   9999999999999999999999999999875432  22


Q ss_pred             cccccccCCcccccccccCCC-CcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPI-TVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~-~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      ....+||+.|||||++.+..+ +.++||||+||++|||+||+.||.......   .+..             +....  .
T Consensus       168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~---~~~~-------------i~~~~--~  229 (275)
T 3hyh_A          168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPV---LFKN-------------ISNGV--Y  229 (275)
T ss_dssp             -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHH-------------HHHTC--C
T ss_pred             cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHH---HHHH-------------HHcCC--C
Confidence            345679999999999998876 579999999999999999999997643211   1100             01110  1


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ..+...++++.+++.+||+.||++|||++|+++
T Consensus       230 ~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          230 TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            112234567889999999999999999999987

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=2e-48  Score=409.93  Aligned_cols=247  Identities=21%  Similarity=0.243  Sum_probs=197.7

Q ss_pred             hhhhhhcCccccceEEEeeec--CCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVN--MGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~--~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~  578 (792)
                      +.+.+.||+|+||+||+++..  ..+++.||||++++..  ......+.+|++++++++|||||++++++.+++..+|||
T Consensus        26 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm  105 (304)
T 3ubd_A           26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLIL  105 (304)
T ss_dssp             EEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEE
T ss_pred             cEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            456689999999999999753  2356789999997542  223457889999999999999999999999999999999


Q ss_pred             EeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          579 EFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       579 E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      ||+++|+|.+++.+...+++..+..++.||+.||+|||++   +|+||||||+|||+++++.+||+|||+|+...... .
T Consensus       106 Ey~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~-~  181 (304)
T 3ubd_A          106 DFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-K  181 (304)
T ss_dssp             CCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC------C
T ss_pred             EcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccCCC-c
Confidence            9999999999998888899999999999999999999999   99999999999999999999999999998654332 2


Q ss_pred             ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          659 TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      .....+||+.|||||++.+..++.++|||||||++|||+||+.||........   +             ..+....  .
T Consensus       182 ~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~---~-------------~~i~~~~--~  243 (304)
T 3ubd_A          182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET---M-------------TMILKAK--L  243 (304)
T ss_dssp             CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---H-------------HHHHHCC--C
T ss_pred             cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHH---H-------------HHHHcCC--C
Confidence            23456799999999999999999999999999999999999999976432211   1             0111111  1


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCC-----HHhHHH
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPT-----MRKVTQ  771 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs-----~~evl~  771 (792)
                      ..+...++++.+|+.+||+.||++|||     ++|+++
T Consensus       244 ~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~  281 (304)
T 3ubd_A          244 GMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR  281 (304)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred             CCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence            122334567889999999999999998     467765

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=2.5e-46  Score=395.69  Aligned_cols=246  Identities=21%  Similarity=0.337  Sum_probs=185.0

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccc-cchHHHHHHHHHhcccCCCCcccccceeccCC---------
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQ---------  572 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~---------  572 (792)
                      +.+.+.||+|+||+||+|... .+++.||||+++.... ...+.+.+|++++++++|||||++++++.+.+         
T Consensus         7 y~~~~~lG~G~fg~V~~a~~~-~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~   85 (299)
T 4g31_A            7 FEPIQCLGRGGFGVVFEAKNK-VDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS   85 (299)
T ss_dssp             EEEEEEEEECC--EEEEEEET-TTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred             CEEeeEEecCCCeEEEEEEEC-CCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence            345678999999999999754 5678999999875433 34467999999999999999999999986544         


Q ss_pred             ---ceEEEEEeccCCCccccccCCCCC---chhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeec
Q 003836          573 ---NRLLVYEFMSNGTVASFLFGDSKP---NWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDF  646 (792)
Q Consensus       573 ---~~~lV~E~~~~gsL~~~l~~~~~l---~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Df  646 (792)
                         ..++||||+++|+|.+++.....+   .+..+..|+.||+.||+|||++   +|+||||||+||||+.++.+||+||
T Consensus        86 ~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~DF  162 (299)
T 4g31_A           86 PKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDF  162 (299)
T ss_dssp             -CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCC
T ss_pred             CCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEccC
Confidence               368999999999999999876543   4456788999999999999999   9999999999999999999999999


Q ss_pred             CCCccccCCCCC-----------ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhH
Q 003836          647 GLAKLLTLDQSH-----------TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAIL  715 (792)
Q Consensus       647 g~a~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~  715 (792)
                      |+|+.+......           ..+..+||+.|||||++.+..++.++|||||||++|||++   ||........  .+
T Consensus       163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~--~~  237 (299)
T 4g31_A          163 GLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVR--TL  237 (299)
T ss_dssp             CCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH--HH
T ss_pred             ccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHH--HH
Confidence            999987543321           1233579999999999999999999999999999999996   7754322111  00


Q ss_pred             HHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          716 TDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                           .........         .......+.+.+++.+||+.||++|||+.|+++
T Consensus       238 -----~~~~~~~~p---------~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          238 -----TDVRNLKFP---------PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             -----HHHHTTCCC---------HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             -----HHHhcCCCC---------CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence                 000000000         011223455678999999999999999999987

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=7.6e-44  Score=386.97  Aligned_cols=261  Identities=18%  Similarity=0.261  Sum_probs=197.1

Q ss_pred             hhhhhhcCccccceEEEeeec--CCCceEEEEEEcccccccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVN--MGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~--~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +.+.++||+|+||+||+|+..  ..+++.||+|++...  ....++.+|++++.++ +|||||++++++.+.++.+||||
T Consensus        23 Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE  100 (361)
T 4f9c_A           23 FKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMP  100 (361)
T ss_dssp             CEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEE
T ss_pred             EEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEe
Confidence            445678999999999999753  346789999998653  3456788999999998 69999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC-CCeEEeecCCCccccCCCC-
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH-YNARISDFGLAKLLTLDQS-  657 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~-~~~kl~Dfg~a~~~~~~~~-  657 (792)
                      |+++|+|.+++.   .+++.++..++.||+.||+|||++   +|+||||||+|||++.+ +.+||+|||+|+....... 
T Consensus       101 ~~~g~~L~~~~~---~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~  174 (361)
T 4f9c_A          101 YLEHESFLDILN---SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIE  174 (361)
T ss_dssp             CCCCCCHHHHHT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCG
T ss_pred             CCCcccHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccc
Confidence            999999999984   589999999999999999999999   99999999999999877 7999999999986543211 


Q ss_pred             --------------------------CccccccccCCcccccccccC-CCCcccceehHHHHHHHHHhcCcCCCcchhhh
Q 003836          658 --------------------------HTNTAIRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIICLRRNIDNEISKV  710 (792)
Q Consensus       658 --------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~  710 (792)
                                                ......+||+.|+|||++.+. .++.++||||+||++|||++|+.||.......
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~  254 (361)
T 4f9c_A          175 LLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDL  254 (361)
T ss_dssp             GGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHH
T ss_pred             ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHH
Confidence                                      112335799999999999775 58999999999999999999999996544322


Q ss_pred             hhhhH-HH-------HHHH-hhc----------ccchhHhhhch------------------hcccCCHHHHHHHHHHHH
Q 003836          711 DKAIL-TD-------WAYD-RYQ----------ERTLEALVEND------------------LEAMNNVTMLHRFVMVAF  753 (792)
Q Consensus       711 ~~~~~-~~-------~~~~-~~~----------~~~~~~~~~~~------------------~~~~~~~~~~~~l~~l~~  753 (792)
                      +.... ..       .... ...          ......+....                  .........++++.+|+.
T Consensus       255 ~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~  334 (361)
T 4f9c_A          255 TALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLD  334 (361)
T ss_dssp             HHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHHH
T ss_pred             HHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHH
Confidence            21100 00       0000 000          00000000000                  000001123467889999


Q ss_pred             HccccCCCCCCCHHhHHH
Q 003836          754 WCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       754 ~Cl~~~p~~RPs~~evl~  771 (792)
                      +||+.||++|||++|+++
T Consensus       335 ~lL~~dP~~R~ta~eaL~  352 (361)
T 4f9c_A          335 KLLDLNPASRITAEEALL  352 (361)
T ss_dssp             HHTCSCTTTSCCHHHHHT
T ss_pred             HHCcCChhHCcCHHHHhc
Confidence            999999999999999998

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.4e-43  Score=388.99  Aligned_cols=265  Identities=20%  Similarity=0.267  Sum_probs=201.0

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccc--cchHHHHHHHHHhcccCCCCcccccceec------cCCce
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ--DSEKEFKAEVNGIGQTHHKNLVRLLGYCD------EGQNR  574 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~l~g~~~------~~~~~  574 (792)
                      +.+.++||+|+||+||+|.. ..+++.||||++++...  ...+.+.+|+++|++++|||||++++++.      +.+..
T Consensus        56 Y~~~~~lG~G~fG~V~~a~~-~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~  134 (398)
T 4b99_A           56 YEIIETIGNGAYGVVSSARR-RLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSV  134 (398)
T ss_dssp             EEEEEEEEECSSCEEEEEEE-TTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCE
T ss_pred             eEEEEEEecccCeEEEEEEE-CCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEE
Confidence            44567899999999999965 45678999999975432  33467889999999999999999999875      34678


Q ss_pred             EEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccC
Q 003836          575 LLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL  654 (792)
Q Consensus       575 ~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~  654 (792)
                      +||||||+ |+|.+++.....+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+|+.+..
T Consensus       135 ~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~  210 (398)
T 4b99_A          135 YVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCT  210 (398)
T ss_dssp             EEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCC--
T ss_pred             EEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeeeccc
Confidence            99999996 68999998888999999999999999999999999   999999999999999999999999999987643


Q ss_pred             CC---CCccccccccCCcccccccccC-CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHH----hh---
Q 003836          655 DQ---SHTNTAIRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYD----RY---  723 (792)
Q Consensus       655 ~~---~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~----~~---  723 (792)
                      ..   .......+||+.|||||++.+. .++.++||||+||++|||++|+.||...........+......    .+   
T Consensus       211 ~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~  290 (398)
T 4b99_A          211 SPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAV  290 (398)
T ss_dssp             -----CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC--
T ss_pred             CccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhh
Confidence            32   2233457899999999998775 5699999999999999999999999765432211111110000    00   


Q ss_pred             cccchhHhhhchh-cccCC-----HHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          724 QERTLEALVENDL-EAMNN-----VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       724 ~~~~~~~~~~~~~-~~~~~-----~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ........+.... ....+     ...+.++.+|+.+||+.||++|||++|+++.
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  345 (398)
T 4b99_A          291 GAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH  345 (398)
T ss_dssp             ---CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             hhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            0000001110000 00000     1234678899999999999999999999874

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=4.9e-43  Score=377.91  Aligned_cols=290  Identities=42%  Similarity=0.690  Sum_probs=243.9

Q ss_pred             cccCccccCHHHHHHHHhhhh--hhcCccccceEEEeeecCCCceEEEEEEcccccc-cchHHHHHHHHHhcccCCCCcc
Q 003836          486 SYMNLRCFTYKELVEVTRGFK--EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLV  562 (792)
Q Consensus       486 ~~~~~~~~~~~el~~~~~~~~--~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv  562 (792)
                      .....+.|++.++.....+|.  +.||+|+||.||+|...  +++.||||++..... .....+.+|++++++++||||+
T Consensus        13 ~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv   90 (326)
T 3uim_A           13 HLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA--DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL   90 (326)
T ss_dssp             --CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCS--SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBC
T ss_pred             ccCccceecHHHHHHHhhccccceeEecCCCcEEEEEEec--CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCcc
Confidence            344567789999998887775  68999999999999753  467899999976432 2344799999999999999999


Q ss_pred             cccceeccCCceEEEEEeccCCCccccccCCC----CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC
Q 003836          563 RLLGYCDEGQNRLLVYEFMSNGTVASFLFGDS----KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH  638 (792)
Q Consensus       563 ~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~----~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~  638 (792)
                      ++++++.+.+..++||||+++|+|.+++....    .+++..+..|+.||+.||+|||+.+..+|+||||||+|||++++
T Consensus        91 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~  170 (326)
T 3uim_A           91 RLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEE  170 (326)
T ss_dssp             CCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTT
T ss_pred             ceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCC
Confidence            99999999999999999999999999997642    48999999999999999999999877799999999999999999


Q ss_pred             CCeEEeecCCCccccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchh-hhhhhhHHH
Q 003836          639 YNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEIS-KVDKAILTD  717 (792)
Q Consensus       639 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~-~~~~~~~~~  717 (792)
                      +.+||+|||+++..............||+.|+|||.+.+..++.++||||||+++|||++|+.||..... .........
T Consensus       171 ~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~  250 (326)
T 3uim_A          171 FEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD  250 (326)
T ss_dssp             CCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHH
T ss_pred             CCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHH
Confidence            9999999999998765555555556799999999999988999999999999999999999999964322 122233445


Q ss_pred             HHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          718 WAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      +.........+..+.+.......+...+..+.+++.+||+.||.+|||++||+++|++..
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~  310 (326)
T 3uim_A          251 WVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG  310 (326)
T ss_dssp             HHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred             HHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence            555555666677777777777888899999999999999999999999999999998753

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*

Probab=100.00  E-value=4.4e-43  Score=362.86  Aligned_cols=229  Identities=22%  Similarity=0.293  Sum_probs=185.5

Q ss_pred             hcccCcccCCcceeecCCCCceecCCCeEEEeeeecCCCCceEEEEEeecCCCCcEEEEecCCCCCCC-----CeeEEEE
Q 003836           20 AQSNGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAVNPAPR-----GSKLRLT   94 (792)
Q Consensus        20 ~~~~~~i~~g~~l~~~~~~~~lvS~~g~F~lGF~~~~~~~~~~~gIW~~~~~~~tvvWvANr~~P~~~-----~~~l~~~   94 (792)
                      +++.|+|.+||+|+++   ++|||++|+|+||||+++   ++|+   |+  |.+ ||||||||+|+.+     ++.|+|+
T Consensus        11 ~~~~~~l~~g~~l~~~---~~l~S~~g~F~lgf~~~~---~~~l---y~--~~~-vvW~Anr~~p~~~~~~~~~~~l~l~   78 (276)
T 3m7h_A           11 GVGTSVLPAYQTLSAG---QYLLSPNQRFKLLLQGDG---NLVI---QD--NGA-TVWVANEQQPFSSTIPLRNKKAPLA   78 (276)
T ss_dssp             CTTSSEECTTEEBCTT---CEEECTTSSEEEEECTTS---CEEE---EE--TTE-EEEECSTTSTTEEEEECCCTTCCSE
T ss_pred             cccCCEecCCCEecCC---CEEEcCCCcEEEEEECCC---CeEE---EC--CCC-eEEECCCCCCcCCcccccceEEEEe
Confidence            3457999999999864   599999999999999432   5677   76  778 9999999999965     6789999


Q ss_pred             eCccEEE--EcCCCCEEEEeccCC------CcceeEEEecCCcEEEEecCCccccccccCCcccccCCCc----cccceE
Q 003836           95 ANRGLVL--EDPEGREIWKSEIST------GQAAFGVLYDTGNFLIVNTNSERLWQSFDHPTDTLLPTQT----MERGGV  162 (792)
Q Consensus        95 ~~G~Lvl--~~~~~~~vWst~~~~------~~~~~a~LldsGNlVl~~~~~~~lWQSFd~PtDtlLpg~~----l~~~~~  162 (792)
                      .||+|+|  .|++|++||||+++.      .++++|+|+|+|||||+|  +.+||||  ||||||||||+    |..+++
T Consensus        79 ~~G~Lvl~~~~~~~~~vWst~~~~~~~~~~~~~~~a~L~d~GNlVl~~--~~~lWqS--~ptdtlLpg~~~~~~l~~g~~  154 (276)
T 3m7h_A           79 FYVQYGAFLDDYSRRRVWLTDNSTFTSNDQWNRTHLVLQDDGNIVLVD--SLALWNG--TPAIPLVPGAIDSLLLAPGSE  154 (276)
T ss_dssp             EEESSSEEEEEGGGTEEEEECCCCCCCTTHHHHEEEEECTTSCEEEEE--EEEEEES--CTTSCCCCSCTTCEEECSSEE
T ss_pred             CCCcEEEEEeCCCCCEEEEeCCCcccccccCCceEEEEeCCCCEEecC--CceeeCc--ccccccccccccccccccCcc
Confidence            9999999  788899999999865      345789999999999998  7899999  99999999999    777788


Q ss_pred             EeeeccCCCCCCCceeEeecCCCceeeeeeccCCCcccccccccCCcccccCCCcceeEEccCCcEEEEecccceeeecc
Q 003836          163 VSSRRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWSNTFDTNRSNAGYRVVFNESGQLYVLRENKQRASLVP  242 (792)
Q Consensus       163 L~S~~s~~~~s~G~~~~~~~~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  242 (792)
                      |   ++.+||++|.|+++++++|+++++  +..    ..+||.++++..   +. ..+.++.+|.+++++.++..++.+.
T Consensus       155 L---~S~~dps~G~fsl~l~~dGnlvLy--~~~----~~~yW~Sgt~~~---~~-~~l~l~~dGnLvl~d~~~~~vWsS~  221 (276)
T 3m7h_A          155 L---VQGVVYGAGASKLVFQGDGNLVAY--GPN----GAATWNAGTQGK---GA-VRAVFQGDGNLVVYGAGNAVLWHSH  221 (276)
T ss_dssp             E---CTTCEEEETTEEEEECTTSCEEEE--CTT----SSEEEECCCTTT---TC-CEEEECTTSCEEEECTTSCEEEECS
T ss_pred             c---ccCCCCCCceEEEeecCCceEEEE--eCC----CeEEEECCCCCC---cc-EEEEEcCCCeEEEEeCCCcEEEEec
Confidence            8   557899999999999999987663  221    267999988754   22 5678899999999887665555553


Q ss_pred             ccccccccEEEEEEecCCcEEEEecCCCCCCCcceeEEeccCCcc
Q 003836          243 ETVSAKENYLRATLNFDGVFIFYSHPKNNSTGDAIWSVSDVLPEN  287 (792)
Q Consensus       243 ~~~~~~~~~~r~~L~~dG~l~~y~~~~~~~~~~~~w~~~~~~p~~  287 (792)
                      .. .  ...+|++|+.||++++|.|       ...|+.++..|..
T Consensus       222 t~-~--~~~~rl~Ld~dGnLvly~~-------~~~Wqsf~~~P~~  256 (276)
T 3m7h_A          222 TG-G--HASAVLRLQANGSIAILDE-------KPVWARFGFQPTY  256 (276)
T ss_dssp             CT-T--CTTCEEEECTTSCEEEEEE-------EEEEESSSCCTTS
T ss_pred             CC-C--CCCEEEEEcCCccEEEEcC-------CCeEEccCccCCc
Confidence            21 1  2247999999999999997       1248876666653

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=4.9e-42  Score=369.29  Aligned_cols=270  Identities=36%  Similarity=0.650  Sum_probs=227.7

Q ss_pred             hhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCCC
Q 003836          506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGT  585 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~gs  585 (792)
                      .+.||+|+||+||+|...  +++.||||++........+.+.+|++++++++||||+++++++.+.+..++||||+++|+
T Consensus        44 ~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~  121 (321)
T 2qkw_B           44 KFLIGHGVFGKVYKGVLR--DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGN  121 (321)
T ss_dssp             CCCSCBCSSSEEEEEECT--TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCB
T ss_pred             cceeecCCCeeEEEEEEC--CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCc
Confidence            467999999999999854  467899999987766677889999999999999999999999999999999999999999


Q ss_pred             ccccccCCC----CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC-CCcc
Q 003836          586 VASFLFGDS----KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ-SHTN  660 (792)
Q Consensus       586 L~~~l~~~~----~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~-~~~~  660 (792)
                      |.+++....    .+++..+..++.||++||+|||++   +|+||||||+|||++.++.+||+|||+++...... ....
T Consensus       122 L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  198 (321)
T 2qkw_B          122 LKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLS  198 (321)
T ss_dssp             TGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCB
T ss_pred             HHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence            999997653    588999999999999999999998   99999999999999999999999999998754322 2223


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ....||+.|+|||.+.+..++.++||||||+++|||++|+.||........ .....+.........+...+++......
T Consensus       199 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (321)
T 2qkw_B          199 TVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREM-VNLAEWAVESHNNGQLEQIVDPNLADKI  277 (321)
T ss_dssp             CCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSC-CCHHHHTHHHHTTTCCCSSSSSSCTTCS
T ss_pred             cccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHH-HHHHHHhhhccccccHHHhcChhhcccc
Confidence            445689999999999988999999999999999999999999975433211 1222333333444455566666666667


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCCCC
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPI  781 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~~~  781 (792)
                      ..+.+..+.+++.+||+.||++|||++|+++.|+.++++..
T Consensus       278 ~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~~  318 (321)
T 2qkw_B          278 RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE  318 (321)
T ss_dssp             CHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSC
T ss_pred             CHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhccc
Confidence            78899999999999999999999999999999998776543

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=1.2e-42  Score=400.10  Aligned_cols=250  Identities=23%  Similarity=0.335  Sum_probs=206.7

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.++||+|+||.||++.. ..+++.||+|++........+.+.+|+++|++++|||||++++++.+.+..+||||||+
T Consensus       159 Y~i~~~lG~G~fg~V~~~~~-~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~  237 (573)
T 3uto_A          159 YDIHEELGTGAFGVVHRVTE-RATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMS  237 (573)
T ss_dssp             EEEEEEEEEETTEEEEEEEE-TTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred             cEEEEEEeeccCeEEEEEEE-CCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecC
Confidence            45668899999999999975 45678999999987666667789999999999999999999999999999999999999


Q ss_pred             CCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC--CCeEEeecCCCccccCCCCCc
Q 003836          583 NGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH--YNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       583 ~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~--~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      +|+|.++|... ..+++..+..++.||+.||+|||++   +|+||||||+|||++.+  +.+||+|||+++.+...  ..
T Consensus       238 gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~--~~  312 (573)
T 3uto_A          238 GGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK--QS  312 (573)
T ss_dssp             CCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT--SE
T ss_pred             CCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccCC--Cc
Confidence            99999998654 5799999999999999999999999   99999999999999854  89999999999987533  23


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      ....+||+.|||||++.+..|+.++|||||||++|||++|+.||........   +...     ....      ......
T Consensus       313 ~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~---~~~i-----~~~~------~~~~~~  378 (573)
T 3uto_A          313 VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET---LRNV-----KSCD------WNMDDS  378 (573)
T ss_dssp             EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH---HHHH-----HTTC------CCCCSG
T ss_pred             eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH---HHHH-----HhCC------CCCCcc
Confidence            3456799999999999999999999999999999999999999976433211   1000     0000      000111


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .....+.++.+|+.+||+.||.+|||++|+++.
T Consensus       379 ~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H  411 (573)
T 3uto_A          379 AFSGISEDGKDFIRKLLLADPNTRMTIHQALEH  411 (573)
T ss_dssp             GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             cccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            112345678899999999999999999999883

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=1.4e-42  Score=396.36  Aligned_cols=247  Identities=22%  Similarity=0.244  Sum_probs=199.6

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHH---HHHHhcccCCCCcccccceeccCCceEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKA---EVNGIGQTHHKNLVRLLGYCDEGQNRLLV  577 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~---Ei~~l~~l~h~niv~l~g~~~~~~~~~lV  577 (792)
                      .+.++||+|+||.||++.. ..+++.||||++.+..   ......+.+   ++.++..++|||||++++++.+.+..|||
T Consensus       192 ~i~k~LG~G~fG~V~la~~-~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylV  270 (689)
T 3v5w_A          192 SVHRIIGRGGFGEVYGCRK-ADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFI  270 (689)
T ss_dssp             EEEEEEEECSSEEEEEEEE-TTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEE
T ss_pred             EEEEEEecccCeEEEEEEE-CCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEE
Confidence            3457899999999999975 4567899999996532   222333444   46677788999999999999999999999


Q ss_pred             EEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC
Q 003836          578 YEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      |||+++|+|.++|.....+++.....++.||+.||+|||++   +||||||||+||||+.+|.+||+|||+|+.+.... 
T Consensus       271 mEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~-  346 (689)
T 3v5w_A          271 LDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-  346 (689)
T ss_dssp             ECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCC-
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeecCCCC-
Confidence            99999999999998888899999999999999999999999   99999999999999999999999999998765332 


Q ss_pred             CccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          658 HTNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       658 ~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                        ....+||+.|||||++.. ..|+.++|||||||+||||++|+.||............             ......  
T Consensus       347 --~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~-------------~~i~~~--  409 (689)
T 3v5w_A          347 --PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID-------------RMTLTM--  409 (689)
T ss_dssp             --CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHH-------------HHHHHC--
T ss_pred             --CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH-------------HhhcCC--
Confidence              234679999999999964 57999999999999999999999999754322111110             001111  


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCCCCC-----HHhHHHH
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPT-----MRKVTQM  772 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs-----~~evl~~  772 (792)
                      ....+...+.++.+|+.+||+.||.+|++     ++||+++
T Consensus       410 ~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H  450 (689)
T 3v5w_A          410 AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES  450 (689)
T ss_dssp             CCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred             CCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence            11123345677899999999999999998     6787753

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=1.1e-41  Score=364.33  Aligned_cols=260  Identities=28%  Similarity=0.443  Sum_probs=200.1

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      +.+.+.||+|+||+||+|..   .++.||||++....  ....+++.+|++++++++||||+++++++.+.+..++||||
T Consensus        39 y~i~~~lG~G~~g~V~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  115 (309)
T 3p86_A           39 LNIKEKIGAGSFGTVHRAEW---HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEY  115 (309)
T ss_dssp             EEEEEEEEECSSEEEEEEEE---TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEEC
T ss_pred             ceeeeEeecCCCeEEEEEEE---CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEec
Confidence            34557899999999999975   35689999987543  23346789999999999999999999999999999999999


Q ss_pred             ccCCCccccccCCCC---CchhHHHHHHHHHHHHHHHHhhccCCC--eEecCCCCCcEEEcCCCCeEEeecCCCccccCC
Q 003836          581 MSNGTVASFLFGDSK---PNWKLRTEIAMGIAGGLFYLHEECCTQ--IIHCDIKPQNILLDDHYNARISDFGLAKLLTLD  655 (792)
Q Consensus       581 ~~~gsL~~~l~~~~~---l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~  655 (792)
                      +++|+|.+++.....   +++..+..++.||+.||+|||+.   +  |+||||||+|||++.++.+||+|||+++.....
T Consensus       116 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~  192 (309)
T 3p86_A          116 LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST  192 (309)
T ss_dssp             CTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC--------
T ss_pred             CCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCcccccc
Confidence            999999999987643   89999999999999999999998   8  999999999999999999999999999864332


Q ss_pred             CCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          656 QSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       656 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                      . .......||+.|+|||.+.+..++.++||||||+++|||++|+.||..........                .+....
T Consensus       193 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~----------------~~~~~~  255 (309)
T 3p86_A          193 F-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVA----------------AVGFKC  255 (309)
T ss_dssp             ----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHH----------------HHHHSC
T ss_pred             c-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH----------------HHHhcC
Confidence            2 22334568999999999999999999999999999999999999997543221100                000011


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCCCCCCCC
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPIPPCP  785 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~~~p~~P  785 (792)
                      .....+...+..+.+++.+||+.+|.+|||++|+++.|+.+++-..||.+
T Consensus       256 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~~~  305 (309)
T 3p86_A          256 KRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPN  305 (309)
T ss_dssp             CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-------
T ss_pred             CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCCCC
Confidence            11122334456788999999999999999999999999998776555544

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=2.9e-41  Score=361.39  Aligned_cols=255  Identities=25%  Similarity=0.435  Sum_probs=208.9

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      .+.+.||+|+||+||++... .+++.||+|++........+.+.+|++++++++||||+++++++.+++..++||||+++
T Consensus        13 ~~~~~lG~G~~g~V~~~~~~-~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   91 (310)
T 3s95_A           13 IHGEVLGKGCFGQAIKVTHR-ETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKG   91 (310)
T ss_dssp             EEEEEEECCSSEEEEEEEET-TTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             eccceecCCCCEEEEEEEEC-CCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCC
Confidence            34578999999999999764 45679999998776667778899999999999999999999999999999999999999


Q ss_pred             CCccccccC-CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc---
Q 003836          584 GTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT---  659 (792)
Q Consensus       584 gsL~~~l~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~---  659 (792)
                      |+|.+++.. ...+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++.........   
T Consensus        92 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  168 (310)
T 3s95_A           92 GTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGL  168 (310)
T ss_dssp             CBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC---------
T ss_pred             CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccccccccccc
Confidence            999999976 46789999999999999999999999   99999999999999999999999999998764332211   


Q ss_pred             ----------cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchh
Q 003836          660 ----------NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLE  729 (792)
Q Consensus       660 ----------~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  729 (792)
                                .....||+.|+|||.+.+..++.++||||||+++|||++|..|+...........           ....
T Consensus       169 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~-----------~~~~  237 (310)
T 3s95_A          169 RSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFG-----------LNVR  237 (310)
T ss_dssp             -----------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSS-----------BCHH
T ss_pred             ccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHh-----------hhhh
Confidence                      1145699999999999999999999999999999999999998865332211100           0011


Q ss_pred             HhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          730 ALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       730 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      .....    ..+...+..+.+++.+||+.||++|||++|+++.|+.+.
T Consensus       238 ~~~~~----~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~  281 (310)
T 3s95_A          238 GFLDR----YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR  281 (310)
T ss_dssp             HHHHH----TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ccccc----cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            11111    112233456888999999999999999999999998764

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=1.2e-40  Score=365.41  Aligned_cols=255  Identities=24%  Similarity=0.347  Sum_probs=208.1

Q ss_pred             hhhhhcCccccceEEEeeecC------CCceEEEEEEcccccc-cchHHHHHHHHHhccc-CCCCcccccceeccCCceE
Q 003836          504 GFKEELGRGAFGTVYKGFVNM------GSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRL  575 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~------~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~  575 (792)
                      .+.+.||+|+||.||+|....      ..+..||||+++.... ...+.+.+|+.+++++ +||||+++++++.+.+..+
T Consensus        84 ~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~  163 (370)
T 2psq_A           84 TLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLY  163 (370)
T ss_dssp             EEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCE
T ss_pred             EeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEE
Confidence            345789999999999997531      3456799999976432 3456799999999999 8999999999999999999


Q ss_pred             EEEEeccCCCccccccCCC----------------CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCC
Q 003836          576 LVYEFMSNGTVASFLFGDS----------------KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY  639 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~~----------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~  639 (792)
                      +||||+++|+|.+++....                .+++..+..++.||+.||+|||++   +|+||||||+|||++.++
T Consensus       164 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~  240 (370)
T 2psq_A          164 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENN  240 (370)
T ss_dssp             EEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTC
T ss_pred             EEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEECCCC
Confidence            9999999999999997542                478899999999999999999998   999999999999999999


Q ss_pred             CeEEeecCCCccccCCCCC-ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHH
Q 003836          640 NARISDFGLAKLLTLDQSH-TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTD  717 (792)
Q Consensus       640 ~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~  717 (792)
                      .+||+|||+++........ ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||........      
T Consensus       241 ~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~------  314 (370)
T 2psq_A          241 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL------  314 (370)
T ss_dssp             CEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH------
T ss_pred             CEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH------
Confidence            9999999999876543322 2233457889999999999999999999999999999999 9999865422110      


Q ss_pred             HHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          718 WAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                                 ...+........+...+.++.+++.+||+.+|++||++.|+++.|+.++.
T Consensus       315 -----------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~  364 (370)
T 2psq_A          315 -----------FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT  364 (370)
T ss_dssp             -----------HHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -----------HHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence                       11111111222333456678999999999999999999999999998754

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=7.5e-41  Score=360.57  Aligned_cols=261  Identities=24%  Similarity=0.409  Sum_probs=209.4

Q ss_pred             hhhhhhcCccccceEEEeeecCC--CceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMG--SSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~--~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +.+.+.||+|+||+||+|.....  .+..||||+++... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus        51 y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  130 (325)
T 3kul_A           51 IHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTE  130 (325)
T ss_dssp             EEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEE
T ss_pred             eEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEee
Confidence            34457899999999999987432  23569999997643 3445689999999999999999999999999999999999


Q ss_pred             eccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          580 FMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       580 ~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      |+++|+|.+++... ..+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++........
T Consensus       131 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  207 (325)
T 3kul_A          131 YMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA  207 (325)
T ss_dssp             CCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC----C
T ss_pred             CCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccccCccc
Confidence            99999999999655 5789999999999999999999998   9999999999999999999999999999876543322


Q ss_pred             c--cccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          659 T--NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       659 ~--~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                      .  .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||........                 ...+...
T Consensus       208 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~-----------------~~~~~~~  270 (325)
T 3kul_A          208 AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDV-----------------ISSVEEG  270 (325)
T ss_dssp             CEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHH-----------------HHHHHTT
T ss_pred             eeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHH-----------------HHHHHcC
Confidence            2  223346778999999998899999999999999999999 9999865432211                 0111111


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCCCCCC
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPIPP  783 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~~~p~  783 (792)
                      .....+...+..+.+++.+||+.||++|||++||+++|+.+++.+...
T Consensus       271 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~~  318 (325)
T 3kul_A          271 YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESL  318 (325)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC--
T ss_pred             CCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcccc
Confidence            222233345678899999999999999999999999999987655433

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=2.3e-40  Score=352.10  Aligned_cols=248  Identities=25%  Similarity=0.340  Sum_probs=205.6

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      .+.+.||+|+||+||+|.. ..+++.||||++........+.+.+|+.++++++||||+++++++..++..++||||+++
T Consensus        23 ~~~~~lg~G~~g~V~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~  101 (297)
T 3fxz_A           23 TRFEKIGQGASGTVYTAMD-VATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAG  101 (297)
T ss_dssp             CCCEEEEEETTEEEEEEEB-TTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             eeeeeeccCCCeEEEEEEE-CCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCC
Confidence            3457899999999999964 456789999999876666678899999999999999999999999999999999999999


Q ss_pred             CCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccccc
Q 003836          584 GTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAI  663 (792)
Q Consensus       584 gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  663 (792)
                      |+|.+++... .+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++....... .....
T Consensus       102 ~~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~  176 (297)
T 3fxz_A          102 GSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-KRSTM  176 (297)
T ss_dssp             CBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-CBCCC
T ss_pred             CCHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-ccCCc
Confidence            9999999654 588999999999999999999999   999999999999999999999999999987654332 23345


Q ss_pred             cccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHH
Q 003836          664 RGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVT  743 (792)
Q Consensus       664 ~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  743 (792)
                      .||+.|+|||.+.+..++.++||||||+++|||++|+.||............   .            .........+..
T Consensus       177 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~---~------------~~~~~~~~~~~~  241 (297)
T 3fxz_A          177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI---A------------TNGTPELQNPEK  241 (297)
T ss_dssp             CSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH---H------------HHCSCCCSCGGG
T ss_pred             cCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---H------------hCCCCCCCCccc
Confidence            6999999999999999999999999999999999999999654322111000   0            000001111233


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          744 MLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       744 ~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .+..+.+++.+||+.||++|||++|+++.
T Consensus       242 ~~~~~~~li~~~l~~dp~~Rps~~ell~h  270 (297)
T 3fxz_A          242 LSAIFRDFLNRCLEMDVEKRGSAKELLQH  270 (297)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             cCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            45678899999999999999999999873

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=1.1e-39  Score=348.38  Aligned_cols=280  Identities=36%  Similarity=0.626  Sum_probs=225.6

Q ss_pred             cCccccCHHHHHHHHhhhh--------hhcCccccceEEEeeecCCCceEEEEEEccccc----ccchHHHHHHHHHhcc
Q 003836          488 MNLRCFTYKELVEVTRGFK--------EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF----QDSEKEFKAEVNGIGQ  555 (792)
Q Consensus       488 ~~~~~~~~~el~~~~~~~~--------~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~----~~~~~~~~~Ei~~l~~  555 (792)
                      .....|++.++..++.+|.        +.||+|+||.||+|..   .++.||||++....    ....+.+.+|+.++++
T Consensus        10 ~~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~   86 (307)
T 2nru_A           10 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV---NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAK   86 (307)
T ss_dssp             -CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES---SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHH
T ss_pred             CCCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE---CCceEEEEEEecccCcchHHHHHHHHHHHHHHHh
Confidence            3467799999999999986        3599999999999975   35689999986532    2345789999999999


Q ss_pred             cCCCCcccccceeccCCceEEEEEeccCCCccccccC---CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCc
Q 003836          556 THHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFG---DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQN  632 (792)
Q Consensus       556 l~h~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~N  632 (792)
                      ++||||+++++++.+.+..++||||+++++|.+++..   ...+++..+..++.||+.||.|||+.   +|+||||||+|
T Consensus        87 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~N  163 (307)
T 2nru_A           87 CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSAN  163 (307)
T ss_dssp             CCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGG
T ss_pred             cCCCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHH
Confidence            9999999999999999999999999999999999864   24689999999999999999999998   99999999999


Q ss_pred             EEEcCCCCeEEeecCCCccccCCCCC-ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhh
Q 003836          633 ILLDDHYNARISDFGLAKLLTLDQSH-TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVD  711 (792)
Q Consensus       633 ILl~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~  711 (792)
                      ||+++++.+||+|||+++........ ......||+.|+|||.+.+ .++.++||||||+++|||++|+.||........
T Consensus       164 ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~  242 (307)
T 2nru_A          164 ILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL  242 (307)
T ss_dssp             EEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB
T ss_pred             EEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH
Confidence            99999999999999999876543222 2234568999999998865 589999999999999999999999976433211


Q ss_pred             hhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          712 KAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       712 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      ...+..  ........+...++... ...+...+..+.+++.+||+.+|.+|||+++|+++|+++.
T Consensus       243 ~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~  305 (307)
T 2nru_A          243 LLDIKE--EIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT  305 (307)
T ss_dssp             TTHHHH--HHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred             HHHHHH--Hhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence            111100  00111223344444433 2345677889999999999999999999999999998764

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=2.8e-41  Score=358.75  Aligned_cols=271  Identities=23%  Similarity=0.369  Sum_probs=208.5

Q ss_pred             hhhhhhcCccccceEEEeee---cCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceecc--CCceEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFV---NMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDE--GQNRLLV  577 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~---~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~--~~~~~lV  577 (792)
                      +.+.+.||+|+||+||++.+   +..+++.||||++........+.+.+|++++++++||||+++++++..  ....++|
T Consensus        12 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   91 (295)
T 3ugc_A           12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLI   91 (295)
T ss_dssp             EEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEE
T ss_pred             hhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEE
Confidence            44567899999999999975   345678999999987666667889999999999999999999999854  3568999


Q ss_pred             EEeccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC
Q 003836          578 YEFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~  656 (792)
                      |||+++|+|.+++... ..+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++......
T Consensus        92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~  168 (295)
T 3ugc_A           92 MEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK  168 (295)
T ss_dssp             EECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC------
T ss_pred             EEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcccccccCCc
Confidence            9999999999999765 3589999999999999999999998   99999999999999999999999999998765433


Q ss_pred             CC--ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhc
Q 003836          657 SH--TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEN  734 (792)
Q Consensus       657 ~~--~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  734 (792)
                      ..  ......++..|+|||.+.+..++.++||||||+++|||++|..|+............ ...........+...+..
T Consensus       169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  247 (295)
T 3ugc_A          169 EFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG-NDKQGQMIVFHLIELLKN  247 (295)
T ss_dssp             -------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHC-TTCCTHHHHHHHHHHHHT
T ss_pred             ceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhc-CccccchhHHHHHHHHhc
Confidence            21  222345677899999999999999999999999999999999998654322110000 000000000011222222


Q ss_pred             hhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          735 DLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       735 ~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      ......+...+.++.+++.+||+.||++|||++|++++|+.+.
T Consensus       248 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~  290 (295)
T 3ugc_A          248 NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR  290 (295)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            2233334456678999999999999999999999999998764

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=7.7e-41  Score=367.19  Aligned_cols=256  Identities=25%  Similarity=0.420  Sum_probs=197.7

Q ss_pred             hhhhhhcCccccceEEEeeecC--CCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNM--GSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~--~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +.+.+.||+|+||.||+|....  ..+..||||+++... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus        47 ~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  126 (373)
T 2qol_A           47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE  126 (373)
T ss_dssp             CCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             ceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEe
Confidence            3445789999999999997642  345689999997643 3345689999999999999999999999999999999999


Q ss_pred             eccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          580 FMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       580 ~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      |+++|+|.+++... ..+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++........
T Consensus       127 ~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~  203 (373)
T 2qol_A          127 YMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA  203 (373)
T ss_dssp             CCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred             CCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccccCCcc
Confidence            99999999999765 4689999999999999999999998   9999999999999999999999999999876543322


Q ss_pred             cc--ccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          659 TN--TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       659 ~~--~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                      ..  ....+++.|+|||.+.+..++.++||||||+++|||++ |+.||.......                 +...+...
T Consensus       204 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~-----------------~~~~i~~~  266 (373)
T 2qol_A          204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD-----------------VIKAVDEG  266 (373)
T ss_dssp             ----------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH-----------------HHHHHHTT
T ss_pred             ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH-----------------HHHHHHcC
Confidence            21  12235778999999999999999999999999999998 999986543211                 01111122


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                      .....+...+..+.+++.+||+.+|++||+++||+++|+.+++
T Consensus       267 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~  309 (373)
T 2qol_A          267 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR  309 (373)
T ss_dssp             EECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence            2222233456778999999999999999999999999987654

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=2.2e-40  Score=356.90  Aligned_cols=245  Identities=24%  Similarity=0.347  Sum_probs=204.0

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .+.+.||+|+||.||+|... .+++.||||++....  ....+.+.+|++++++++||||+++++++...+..++||||+
T Consensus        18 ~~~~~lG~G~~g~V~~a~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~   96 (328)
T 3fe3_A           18 RLLKTIGKGNFAKVKLARHI-LTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYA   96 (328)
T ss_dssp             EEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             EEEEEEeeCCCEEEEEEEEC-CCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECC
Confidence            34578999999999999753 456799999987542  334567889999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      ++|+|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++.....  ....
T Consensus        97 ~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~--~~~~  171 (328)
T 3fe3_A           97 SGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG--GKLD  171 (328)
T ss_dssp             TTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS--CGGG
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCC--Cccc
Confidence            9999999998888899999999999999999999998   9999999999999999999999999999876433  2334


Q ss_pred             cccccCCcccccccccCCCC-cccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          662 AIRGTKGYVAPEWFRNMPIT-VKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~~~-~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ...||+.|+|||.+.+..++ .++|||||||++|||++|+.||.........                ..+.....  ..
T Consensus       172 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~----------------~~i~~~~~--~~  233 (328)
T 3fe3_A          172 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELR----------------ERVLRGKY--RI  233 (328)
T ss_dssp             TTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----------------HHHHHCCC--CC
T ss_pred             cccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHH----------------HHHHhCCC--CC
Confidence            56799999999999888765 8999999999999999999999764322110                00111111  11


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      +...+.++.+++.+||+.||.+|||++|+++.
T Consensus       234 p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  265 (328)
T 3fe3_A          234 PFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD  265 (328)
T ss_dssp             CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred             CCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            22345678899999999999999999999875

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=8.9e-41  Score=359.61  Aligned_cols=269  Identities=24%  Similarity=0.360  Sum_probs=203.8

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCC----ceEEEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQ----NRLLVYE  579 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~----~~~lV~E  579 (792)
                      .+.++||+|+||+||+|...   ++.||||++... ......+.+|+.++++++||||+++++++.+..    ..++|||
T Consensus        27 ~~~~~lg~G~~g~Vy~~~~~---~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e  102 (322)
T 3soc_A           27 QLLEVKARGRFGCVWKAQLL---NEYVAVKIFPIQ-DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITA  102 (322)
T ss_dssp             EEEEEEECSTTCEEEEEEET---TEEEEEEEECGG-GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred             hhhheecccCceEEEEEEEC---CCEEEEEEeecC-chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEe
Confidence            35578999999999999764   578999999654 333456677999999999999999999997754    4699999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhcc-------CCCeEecCCCCCcEEEcCCCCeEEeecCCCccc
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEEC-------CTQIIHCDIKPQNILLDDHYNARISDFGLAKLL  652 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-------~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~  652 (792)
                      |+++|+|.+++.. ..+++..+..++.||+.||+|||+.+       ..+|+||||||+|||++.++.+||+|||+++..
T Consensus       103 ~~~~g~L~~~l~~-~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~  181 (322)
T 3soc_A          103 FHEKGSLSDFLKA-NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKF  181 (322)
T ss_dssp             CCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEE
T ss_pred             cCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCccccc
Confidence            9999999999965 45899999999999999999999852       238999999999999999999999999999876


Q ss_pred             cCCCCC-ccccccccCCccccccccc-----CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhccc
Q 003836          653 TLDQSH-TNTAIRGTKGYVAPEWFRN-----MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQER  726 (792)
Q Consensus       653 ~~~~~~-~~~~~~gt~~y~aPE~~~~-----~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~  726 (792)
                      ...... ......||+.|+|||.+.+     ..++.++|||||||++|||++|+.||............... .......
T Consensus       182 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~-~~~~~~~  260 (322)
T 3soc_A          182 EAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEI-GQHPSLE  260 (322)
T ss_dssp             CTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHH-CSSCCHH
T ss_pred             ccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhh-ccCCchh
Confidence            544332 2334579999999999976     35677899999999999999999999754322111100000 0000000


Q ss_pred             chhH-hhhchhccc-----CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          727 TLEA-LVENDLEAM-----NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       727 ~~~~-~~~~~~~~~-----~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                      .+.. .........     .....+.++.+++.+||+.||++|||++||++.|+.+.+
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~  318 (322)
T 3soc_A          261 DMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR  318 (322)
T ss_dssp             HHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            0000 111111111     123456779999999999999999999999999987643

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=3.6e-40  Score=350.06  Aligned_cols=264  Identities=24%  Similarity=0.342  Sum_probs=208.0

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +.+.+.||+|+||.||++... ..++.||+|++....   ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus        13 y~i~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   91 (294)
T 4eqm_A           13 YKIVDKLGGGGMSTVYLAEDT-ILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVME   91 (294)
T ss_dssp             EEEEEEEEEETTEEEEEEEET-TTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEE
T ss_pred             EEEEEEEccCCCEEEEEEEEC-CCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEe
Confidence            345678999999999999754 456789999985432   2334678999999999999999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      |+++++|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++.........
T Consensus        92 ~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  168 (294)
T 4eqm_A           92 YIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ  168 (294)
T ss_dssp             CCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-------
T ss_pred             CCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccccccccc
Confidence            999999999998878899999999999999999999998   99999999999999999999999999998765444344


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      .....||+.|+|||.+.+..++.++||||||+++|||++|+.||........       ........ ..     .....
T Consensus       169 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~-------~~~~~~~~-~~-----~~~~~  235 (294)
T 4eqm_A          169 TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI-------AIKHIQDS-VP-----NVTTD  235 (294)
T ss_dssp             ------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHH-------HHHHHSSC-CC-----CHHHH
T ss_pred             cCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH-------HHHHhhcc-CC-----Ccchh
Confidence            4456799999999999999999999999999999999999999976532211       00111110 00     00011


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCC-CHHhHHHHhccCcCCCCCC
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRP-TMRKVTQMLEGVVEVPIPP  783 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RP-s~~evl~~L~~~~~~~~p~  783 (792)
                      .....+..+.+++.+||+.||++|| +++++.+.|+.++.-....
T Consensus       236 ~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~~  280 (294)
T 4eqm_A          236 VRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRAN  280 (294)
T ss_dssp             SCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSSTT
T ss_pred             cccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccCC
Confidence            1223456788999999999999998 9999999999876554443

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=1.3e-40  Score=348.47  Aligned_cols=254  Identities=25%  Similarity=0.383  Sum_probs=208.8

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.+.||+|+||.||++...  ++..||+|++... ....+++.+|++++.+++||||+++++++.+....++||||++
T Consensus        10 y~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   86 (268)
T 3sxs_A           10 ITLLKELGSGQFGVVKLGKWK--GQYDVAVKMIKEG-SMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYIS   86 (268)
T ss_dssp             EEEEEEEEEETTEEEEEEEET--TTEEEEEEEECBT-TBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             eeeeeeeccCCCceEEEEEec--CceeEEEEEeccC-CCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccC
Confidence            345678999999999999765  3567999999764 3345789999999999999999999999999999999999999


Q ss_pred             CCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          583 NGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       583 ~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      +++|.+++... ..+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++...........
T Consensus        87 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~  163 (268)
T 3sxs_A           87 NGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSV  163 (268)
T ss_dssp             TCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECC
T ss_pred             CCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhhhccc
Confidence            99999999765 4589999999999999999999998   9999999999999999999999999999876554433334


Q ss_pred             cccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ...+|+.|+|||.+.+..++.++||||||+++|||++ |+.||..........                 .+........
T Consensus       164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~-----------------~~~~~~~~~~  226 (268)
T 3sxs_A          164 GTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVL-----------------KVSQGHRLYR  226 (268)
T ss_dssp             SCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH-----------------HHHTTCCCCC
T ss_pred             CCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHH-----------------HHHcCCCCCC
Confidence            4456778999999998899999999999999999999 999986543221100                 0001111111


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCC
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEV  779 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~  779 (792)
                      +...+..+.+++.+||+.+|++|||++|+++.|+.+.+-
T Consensus       227 ~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (268)
T 3sxs_A          227 PHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK  265 (268)
T ss_dssp             CTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred             CCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence            222345788999999999999999999999999988653

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=1.4e-40  Score=348.30  Aligned_cols=253  Identities=25%  Similarity=0.424  Sum_probs=208.2

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.+.||+|+||.||++...  +++.||+|++... ....+++.+|++++++++||||+++++++.+.+..++||||++
T Consensus        12 y~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   88 (269)
T 4hcu_A           12 LTFVQEIGSGQFGLVHLGYWL--NKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   88 (269)
T ss_dssp             EEEEEEEEECSSCEEEEEEET--TTEEEEEEEECTT-SBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             ceeeheecCCCccEEEEEEec--CCCeEEEEEeccc-ccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence            345578999999999999764  3567999999764 3345789999999999999999999999999999999999999


Q ss_pred             CCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          583 NGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       583 ~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      +++|.+++... ..+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++...........
T Consensus        89 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  165 (269)
T 4hcu_A           89 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST  165 (269)
T ss_dssp             TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred             CCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccccccccc
Confidence            99999999654 5689999999999999999999998   9999999999999999999999999999876543333333


Q ss_pred             cccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ...+++.|+|||.+.+..++.++||||||+++|||++ |+.||........   .              ..+........
T Consensus       166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~---~--------------~~~~~~~~~~~  228 (269)
T 4hcu_A          166 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV---V--------------EDISTGFRLYK  228 (269)
T ss_dssp             STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH---H--------------HHHHTTCCCCC
T ss_pred             CcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHH---H--------------HHHhcCccCCC
Confidence            4457888999999998999999999999999999999 8999865432211   0              00011111122


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                      +...+..+.+++.+||+.+|++|||++|++++|+++.+
T Consensus       229 ~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~  266 (269)
T 4hcu_A          229 PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE  266 (269)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence            22345678899999999999999999999999987653

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=1.2e-39  Score=350.63  Aligned_cols=261  Identities=21%  Similarity=0.286  Sum_probs=213.3

Q ss_pred             cccCHHHHHHHHhhh------------hhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCC
Q 003836          491 RCFTYKELVEVTRGF------------KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHH  558 (792)
Q Consensus       491 ~~~~~~el~~~~~~~------------~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h  558 (792)
                      ..+++++++.++...            .+.||+|+||.||+|... .+++.||||++........+.+.+|+.++++++|
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h  101 (321)
T 2c30_A           23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREK-HSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH  101 (321)
T ss_dssp             --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCC
T ss_pred             CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEEC-CCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCC
Confidence            568899999888642            247999999999999764 4567999999987666677889999999999999


Q ss_pred             CCcccccceeccCCceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC
Q 003836          559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH  638 (792)
Q Consensus       559 ~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~  638 (792)
                      |||+++++++...+..++||||+++++|.+++.. ..+++..+..++.||+.||+|||+.   +|+||||||+|||++.+
T Consensus       102 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~  177 (321)
T 2c30_A          102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ-VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLD  177 (321)
T ss_dssp             TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTT
T ss_pred             CCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCC
Confidence            9999999999999999999999999999999864 4689999999999999999999998   99999999999999999


Q ss_pred             CCeEEeecCCCccccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH
Q 003836          639 YNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW  718 (792)
Q Consensus       639 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~  718 (792)
                      +.+||+|||+++....... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||..........     
T Consensus       178 ~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~-----  251 (321)
T 2c30_A          178 GRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK-----  251 (321)
T ss_dssp             CCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-----
T ss_pred             CcEEEeeeeeeeecccCcc-ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-----
Confidence            9999999999987654322 2234569999999999999999999999999999999999999996543211100     


Q ss_pred             HHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          719 AYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                         .....     ..+..  ......+..+.+++.+||+.||++|||++|+++.
T Consensus       252 ---~~~~~-----~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  295 (321)
T 2c30_A          252 ---RLRDS-----PPPKL--KNSHKVSPVLRDFLERMLVRDPQERATAQELLDH  295 (321)
T ss_dssp             ---HHHHS-----SCCCC--TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             ---HHhcC-----CCCCc--CccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence               00000     00000  0112234578899999999999999999999874

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=3.1e-40  Score=375.94  Aligned_cols=254  Identities=27%  Similarity=0.391  Sum_probs=211.9

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.++||+|+||.||+|... ..++.||||+++... ...++|.+|++++++++||||++++++|.+....+|||||++
T Consensus       222 ~~~~~~lG~G~fg~Vy~~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~  299 (495)
T 1opk_A          222 ITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT  299 (495)
T ss_dssp             EEEEEESGGGTTSSEEEEEEG-GGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             ceeeeEecCCCCeEEEEEEEc-CCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccC
Confidence            345678999999999999865 346789999997643 346789999999999999999999999999999999999999


Q ss_pred             CCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          583 NGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       583 ~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +|+|.+++...  ..+++..+..|+.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++..........
T Consensus       300 ~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  376 (495)
T 1opk_A          300 YGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH  376 (495)
T ss_dssp             TCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECC
T ss_pred             CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCceeec
Confidence            99999999753  4688999999999999999999998   999999999999999999999999999987654433333


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      ....+++.|+|||.+....++.++|||||||++|||++ |+.||.......                 +...+.......
T Consensus       377 ~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~-----------------~~~~~~~~~~~~  439 (495)
T 1opk_A          377 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-----------------VYELLEKDYRME  439 (495)
T ss_dssp             TTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG-----------------HHHHHHTTCCCC
T ss_pred             CCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH-----------------HHHHHHcCCCCC
Confidence            34456789999999998899999999999999999999 888886542211                 111122222233


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                      .+...+..+.+++.+||+.||++|||+.+|+++|+.+.+
T Consensus       440 ~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~  478 (495)
T 1opk_A          440 RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ  478 (495)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred             CCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence            344456788999999999999999999999999998754

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=1.1e-39  Score=355.86  Aligned_cols=249  Identities=24%  Similarity=0.316  Sum_probs=203.7

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccccc------chHHHHHHHHHhcccCCCCcccccceeccCCceEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD------SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLL  576 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~------~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~l  576 (792)
                      +.+.+.||+|+||.||++... .+++.+|+|++......      ..+.+.+|+.++++++||||+++++++.+....++
T Consensus        14 y~~~~~LG~G~fg~V~~~~~~-~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l   92 (361)
T 2yab_A           14 YDIGEELGSGQFAIVKKCREK-STGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVL   92 (361)
T ss_dssp             EEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             eEEeeEEeeCcCEEEEEEEEC-CCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEE
Confidence            345678999999999999754 56789999999764322      35789999999999999999999999999999999


Q ss_pred             EEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCC----CeEEeecCCCccc
Q 003836          577 VYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY----NARISDFGLAKLL  652 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~----~~kl~Dfg~a~~~  652 (792)
                      ||||+++|+|.+++.....+++..+..++.||+.||.|||+.   +|+||||||+|||++.++    .+||+|||+++..
T Consensus        93 v~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~  169 (361)
T 2yab_A           93 ILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI  169 (361)
T ss_dssp             EEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSSCEEC
T ss_pred             EEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCCceEc
Confidence            999999999999998888899999999999999999999998   999999999999998877    7999999999876


Q ss_pred             cCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhh
Q 003836          653 TLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALV  732 (792)
Q Consensus       653 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  732 (792)
                      ....  ......||+.|+|||++.+..++.++|||||||++|||++|..||........   +...     .....    
T Consensus       170 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~---~~~i-----~~~~~----  235 (361)
T 2yab_A          170 EDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET---LANI-----TAVSY----  235 (361)
T ss_dssp             CTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH---HHHH-----HTTCC----
T ss_pred             CCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHH-----HhcCC----
Confidence            5422  23345699999999999999999999999999999999999999976432211   1000     00000    


Q ss_pred             hchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          733 ENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       733 ~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                        ..........+..+.+++.+||+.||++|||++|+++
T Consensus       236 --~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          236 --DFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             --CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             --CCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence              0000000123467889999999999999999999987

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=1e-39  Score=352.66  Aligned_cols=246  Identities=24%  Similarity=0.282  Sum_probs=204.8

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccc---cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV---FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      .+.+.||+|+||.||++... .+++.||+|++++.   .......+.+|++++++++||||+++++++.+.+..++||||
T Consensus         8 ~~~~~lG~G~fg~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~   86 (337)
T 1o6l_A            8 DYLKLLGKGTFGKVILVREK-ATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEY   86 (337)
T ss_dssp             EEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             EEEEEEecCCCeEEEEEEEC-CCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeC
Confidence            34578999999999999754 56789999999753   234456789999999999999999999999999999999999


Q ss_pred             ccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          581 MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       581 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +++|+|..++.....+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++...... ...
T Consensus        87 ~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~-~~~  162 (337)
T 1o6l_A           87 ANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-ATM  162 (337)
T ss_dssp             CTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT-CCB
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccCC-Ccc
Confidence            99999999998878899999999999999999999998   99999999999999999999999999998643222 223


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ....||+.|+|||++.+..++.++|||||||++|||++|+.||........   .             ..+.....  ..
T Consensus       163 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~---~-------------~~i~~~~~--~~  224 (337)
T 1o6l_A          163 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL---F-------------ELILMEEI--RF  224 (337)
T ss_dssp             CCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH---H-------------HHHHHCCC--CC
T ss_pred             cccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHH---H-------------HHHHcCCC--CC
Confidence            456799999999999999999999999999999999999999975432111   0             00111111  12


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCC-----CHHhHHHH
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRP-----TMRKVTQM  772 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RP-----s~~evl~~  772 (792)
                      +...+.++.+++.+||+.||++||     +++||++.
T Consensus       225 p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h  261 (337)
T 1o6l_A          225 PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             CCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence            233456788999999999999999     89999864

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=1.9e-40  Score=362.70  Aligned_cols=256  Identities=25%  Similarity=0.372  Sum_probs=205.8

Q ss_pred             hhhhhhcCccccceEEEeee----cCCCceEEEEEEcccccc-cchHHHHHHHHHhccc-CCCCcccccceeccCCc-eE
Q 003836          503 RGFKEELGRGAFGTVYKGFV----NMGSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQN-RL  575 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~----~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~-~~  575 (792)
                      +.+.+.||+|+||.||+|..    +..+++.||||+++.... ...+.+.+|++++.++ +||||+++++++.+.+. .+
T Consensus        24 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~  103 (359)
T 3vhe_A           24 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM  103 (359)
T ss_dssp             EEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCE
T ss_pred             eeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceE
Confidence            34457899999999999974    334568999999976433 3346799999999999 79999999999987654 89


Q ss_pred             EEEEeccCCCccccccCCCC------------------------------------------------------------
Q 003836          576 LVYEFMSNGTVASFLFGDSK------------------------------------------------------------  595 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~~~------------------------------------------------------------  595 (792)
                      +||||+++|+|.+++.....                                                            
T Consensus       104 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (359)
T 3vhe_A          104 VIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPE  183 (359)
T ss_dssp             EEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------
T ss_pred             EEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhccccc
Confidence            99999999999999976432                                                            


Q ss_pred             ------CchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC-CccccccccCC
Q 003836          596 ------PNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS-HTNTAIRGTKG  668 (792)
Q Consensus       596 ------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~  668 (792)
                            +++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++....... .......||+.
T Consensus       184 ~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~  260 (359)
T 3vhe_A          184 DLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK  260 (359)
T ss_dssp             CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGG
T ss_pred             chhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCce
Confidence                  78899999999999999999999   999999999999999999999999999987644332 22334568999


Q ss_pred             cccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHH
Q 003836          669 YVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHR  747 (792)
Q Consensus       669 y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  747 (792)
                      |+|||.+.+..++.++||||||+++|||++ |+.||........                +...+........+...+.+
T Consensus       261 y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~  324 (359)
T 3vhe_A          261 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE----------------FCRRLKEGTRMRAPDYTTPE  324 (359)
T ss_dssp             GCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH----------------HHHHHHHTCCCCCCTTCCHH
T ss_pred             eEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH----------------HHHHHHcCCCCCCCCCCCHH
Confidence            999999999999999999999999999998 9999965432111                00111111112223334567


Q ss_pred             HHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          748 FVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       748 l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      +.+++.+||+.||++|||++||+++|+.++
T Consensus       325 l~~li~~~l~~dP~~Rps~~ell~~L~~~~  354 (359)
T 3vhe_A          325 MYQTMLDCWHGEPSQRPTFSELVEHLGNLL  354 (359)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence            889999999999999999999999998765

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=3.8e-40  Score=371.62  Aligned_cols=253  Identities=26%  Similarity=0.403  Sum_probs=207.7

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      ..+.+.||+|+||.||+|...  .+..||||+++... ...+.|.+|++++++++||||+++++++. .+..++||||++
T Consensus       190 ~~~~~~lG~G~fg~V~~~~~~--~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~  265 (454)
T 1qcf_A          190 LKLEKKLGAGQFGEVWMATYN--KHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMA  265 (454)
T ss_dssp             EEEEEEEECCSSEEEEEEEET--TTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCT
T ss_pred             eEEEEEcccCCceEEEEEEEC--CccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecC
Confidence            345678999999999999875  35679999997643 45788999999999999999999999986 567899999999


Q ss_pred             CCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          583 NGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       583 ~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +|+|.+++...  ..+++..+.+++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++..........
T Consensus       266 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~  342 (454)
T 1qcf_A          266 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR  342 (454)
T ss_dssp             TCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTT
T ss_pred             CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceecc
Confidence            99999999764  3678899999999999999999998   999999999999999999999999999987643322222


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      ....+++.|+|||.+....++.++|||||||++|||++ |+.||.........                 ..+.......
T Consensus       343 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~-----------------~~i~~~~~~~  405 (454)
T 1qcf_A          343 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI-----------------RALERGYRMP  405 (454)
T ss_dssp             CSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH-----------------HHHHHTCCCC
T ss_pred             CCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHH-----------------HHHHcCCCCC
Confidence            33446788999999998999999999999999999999 99999654321110                 0111111222


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCC
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEV  779 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~  779 (792)
                      .+...+.++.+++.+||+.||++|||+++|+++|+.+...
T Consensus       406 ~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~  445 (454)
T 1qcf_A          406 RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA  445 (454)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred             CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence            2334567889999999999999999999999999998653

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.5e-39  Score=348.81  Aligned_cols=250  Identities=25%  Similarity=0.341  Sum_probs=204.5

Q ss_pred             HhhhhhhcCccccceEEEeeecCCCceEEEEEEccccccc------chHHHHHHHHHhcccCCCCcccccceeccCCceE
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD------SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRL  575 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~------~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~  575 (792)
                      .+.+.+.||+|+||.||++... .+++.||+|++......      ..+.+.+|+.++++++||||+++++++.+....+
T Consensus        12 ~y~~~~~lG~G~~g~V~~~~~~-~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           12 YYDTGEELGSGQFAVVKKCREK-STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   90 (326)
T ss_dssp             HEEEEEEEECCSSEEEEEEEET-TTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             ceEeceEEeeCCCeEEEEEEEC-CCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            4556688999999999999754 45679999998754321      3578999999999999999999999999999999


Q ss_pred             EEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCC----CeEEeecCCCcc
Q 003836          576 LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY----NARISDFGLAKL  651 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~----~~kl~Dfg~a~~  651 (792)
                      +||||+++++|.+++.....+++..+..++.||+.||.|||+.   +|+||||||+|||++.++    .+||+|||+++.
T Consensus        91 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~  167 (326)
T 2y0a_A           91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK  167 (326)
T ss_dssp             EEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred             EEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeE
Confidence            9999999999999998888899999999999999999999998   999999999999999887    899999999987


Q ss_pred             ccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHh
Q 003836          652 LTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEAL  731 (792)
Q Consensus       652 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  731 (792)
                      .....  ......||+.|+|||.+.+..++.++|||||||++|||++|+.||........   +.......         
T Consensus       168 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~---~~~~~~~~---------  233 (326)
T 2y0a_A          168 IDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET---LANVSAVN---------  233 (326)
T ss_dssp             CCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH---HHHHHHTC---------
T ss_pred             CCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH---HHHHHhcC---------
Confidence            64332  22345699999999999999999999999999999999999999965432211   10000000         


Q ss_pred             hhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          732 VENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       732 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                        ...........+..+.+++.+||+.||++|||++|+++
T Consensus       234 --~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  271 (326)
T 2y0a_A          234 --YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  271 (326)
T ss_dssp             --CCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             --CCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence              00000000123456889999999999999999999998

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=1.8e-40  Score=370.11  Aligned_cols=250  Identities=20%  Similarity=0.235  Sum_probs=202.2

Q ss_pred             hhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      .++||+|+||+||++... .+++.||+|++.+..   ......+.+|+.++.+++||||++++++|.+.+..+|||||++
T Consensus        79 ~~~LG~G~fG~V~~~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~  157 (437)
T 4aw2_A           79 LKVIGRGAFGEVAVVKLK-NADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYV  157 (437)
T ss_dssp             EEEEEECSSEEEEEEEET-TTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCT
T ss_pred             EEEEEeCCCEEEEEEEEc-CCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCC
Confidence            468999999999999765 456899999997532   2223448899999999999999999999999999999999999


Q ss_pred             CCCccccccC-CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          583 NGTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       583 ~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      +|+|.+++.. ...+++..+..++.||+.||+|||+.   +|+||||||+||||+.++.+||+|||+++...........
T Consensus       158 gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~~  234 (437)
T 4aw2_A          158 GGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSS  234 (437)
T ss_dssp             TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECC
T ss_pred             CCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCcccc
Confidence            9999999987 46799999999999999999999998   9999999999999999999999999999877655444445


Q ss_pred             cccccCCcccccccc-----cCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          662 AIRGTKGYVAPEWFR-----NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~-----~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                      ...||+.|+|||++.     ...++.++|||||||++|||++|+.||...........+....         ..+.   .
T Consensus       235 ~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~---------~~~~---~  302 (437)
T 4aw2_A          235 VAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK---------ERFQ---F  302 (437)
T ss_dssp             SCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHH---------HHCC---C
T ss_pred             cccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhcc---------cccc---C
Confidence            567999999999987     5678999999999999999999999997643221111110000         0000   0


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCC--CCCHHhHHHH
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSH--RPTMRKVTQM  772 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~--RPs~~evl~~  772 (792)
                       .......+.++.+++.+||+.+|++  ||+++|+++.
T Consensus       303 -p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H  339 (437)
T 4aw2_A          303 -PTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH  339 (437)
T ss_dssp             -CSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred             -CcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence             0011124567889999999888888  9999999975

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=4.2e-40  Score=347.39  Aligned_cols=252  Identities=23%  Similarity=0.388  Sum_probs=205.0

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.+.||+|+||.||++...  ++..||+|++... ....+++.+|++++.+++|+||+++++++.+.+..++||||++
T Consensus        26 y~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  102 (283)
T 3gen_A           26 LTFLKELGTGQFGVVKYGKWR--GQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA  102 (283)
T ss_dssp             EEEEEECC---CEEEEEEEET--TTEEEEEEEECTT-SBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCT
T ss_pred             HHhHhhcCCCCCceEEEEEEc--CCCeEEEEEecCC-CCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccC
Confidence            345678999999999999765  4568999999764 3345789999999999999999999999999999999999999


Q ss_pred             CCCccccccC-CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          583 NGTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       583 ~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      +++|.+++.. ...+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++...........
T Consensus       103 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~  179 (283)
T 3gen_A          103 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV  179 (283)
T ss_dssp             TCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTT
T ss_pred             CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccccccccc
Confidence            9999999976 45789999999999999999999998   9999999999999999999999999999876543333333


Q ss_pred             cccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ...+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.........                 ..+........
T Consensus       180 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~-----------------~~~~~~~~~~~  242 (283)
T 3gen_A          180 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA-----------------EHIAQGLRLYR  242 (283)
T ss_dssp             STTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH-----------------HHHHTTCCCCC
T ss_pred             CCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHH-----------------HHHhcccCCCC
Confidence            3456788999999998899999999999999999998 99998654322110                 00111111112


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      +...++.+.+++.+||+.+|++|||++|+++.|+++.
T Consensus       243 ~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~  279 (283)
T 3gen_A          243 PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM  279 (283)
T ss_dssp             CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence            2233467889999999999999999999999998764

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=4.5e-40  Score=354.91  Aligned_cols=254  Identities=24%  Similarity=0.356  Sum_probs=200.8

Q ss_pred             hhhhhhcCccccceEEEeeecCCC---ceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGS---SNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~---~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~  578 (792)
                      +.+.+.||+|+||+||+|......   ...||+|++.... ....+++.+|+.++++++||||++++++|.+.. .++|+
T Consensus        17 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v~   95 (327)
T 3poz_A           17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLIT   95 (327)
T ss_dssp             EEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEEE
T ss_pred             cccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEEE
Confidence            344578999999999999764322   1246888886433 345678999999999999999999999998764 78999


Q ss_pred             EeccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC
Q 003836          579 EFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       579 E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      ||+++|+|.+++... ..+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++.......
T Consensus        96 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~  172 (327)
T 3poz_A           96 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK  172 (327)
T ss_dssp             ECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC
T ss_pred             EecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEccCCcc
Confidence            999999999999764 5789999999999999999999999   999999999999999999999999999987654433


Q ss_pred             Cc-cccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          658 HT-NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       658 ~~-~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                      .. .....+|+.|+|||.+.+..++.++|||||||++|||++ |+.||.......                 +...+...
T Consensus       173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-----------------~~~~~~~~  235 (327)
T 3poz_A          173 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-----------------ISSILEKG  235 (327)
T ss_dssp             -------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-----------------HHHHHHTT
T ss_pred             cccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH-----------------HHHHHHcC
Confidence            22 223456889999999999999999999999999999999 999996543221                 11122222


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      .....+...+..+.+++.+||+.+|++||+++|+++.|+.+.
T Consensus       236 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~  277 (327)
T 3poz_A          236 ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA  277 (327)
T ss_dssp             CCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            222233345567889999999999999999999999997754

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=1.2e-39  Score=350.89  Aligned_cols=250  Identities=27%  Similarity=0.377  Sum_probs=200.9

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      .+.+.||+|+||+||++... .+++.||||++.... ....+.+.+|+.++++++||||+++++++.+++..++||||++
T Consensus        10 ~i~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~   88 (323)
T 3tki_A           10 DLVQTLGEGAYGEVQLAVNR-VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS   88 (323)
T ss_dssp             EEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred             eeeeEEecCCCEEEEEEEEC-CCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCC
Confidence            34578999999999999754 456799999986533 2334678999999999999999999999999999999999999


Q ss_pred             CCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC-Cccc
Q 003836          583 NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS-HTNT  661 (792)
Q Consensus       583 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~-~~~~  661 (792)
                      +|+|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++....... ....
T Consensus        89 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~  165 (323)
T 3tki_A           89 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN  165 (323)
T ss_dssp             TEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBC
T ss_pred             CCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccC
Confidence            999999998888899999999999999999999998   999999999999999999999999999987643322 2233


Q ss_pred             cccccCCcccccccccCCC-CcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          662 AIRGTKGYVAPEWFRNMPI-TVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~~-~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ...||+.|+|||.+.+..+ +.++|||||||++|||++|+.||.........  ...+     .        ........
T Consensus       166 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~--~~~~-----~--------~~~~~~~~  230 (323)
T 3tki_A          166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE--YSDW-----K--------EKKTYLNP  230 (323)
T ss_dssp             SCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHH--HHHH-----H--------TTCTTSTT
T ss_pred             CCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHH--HHHH-----h--------cccccCCc
Confidence            4679999999999987765 78999999999999999999999754322110  1010     0        00000001


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .......+.+++.+||+.||++|||++|+++.
T Consensus       231 ~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h  262 (323)
T 3tki_A          231 WKKIDSAPLALLHKILVENPSARITIPDIKKD  262 (323)
T ss_dssp             GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             cccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence            12234667889999999999999999999875

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=2.1e-40  Score=364.67  Aligned_cols=253  Identities=25%  Similarity=0.365  Sum_probs=205.7

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccc-cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      .+.+.||+|+||.||+|... .+++.||||+++.... ...+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus       117 ~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~  195 (377)
T 3cbl_A          117 VLGEQIGRGNFGEVFSGRLR-ADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQ  195 (377)
T ss_dssp             EEEEEEEEETTEEEEEEEET-TTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             EEeeEeccCCCCeEEEEEEe-cCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCC
Confidence            34578999999999999865 3467899999875432 234578899999999999999999999999999999999999


Q ss_pred             CCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc-
Q 003836          583 NGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN-  660 (792)
Q Consensus       583 ~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~-  660 (792)
                      +|+|.+++... ..+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++.......... 
T Consensus       196 ~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~  272 (377)
T 3cbl_A          196 GGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASG  272 (377)
T ss_dssp             TCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCS
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecC
Confidence            99999999764 4689999999999999999999999   999999999999999999999999999986543221111 


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      ....+++.|+|||.+....++.++||||||+++|||++ |+.||........                 ...+.......
T Consensus       273 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~-----------------~~~~~~~~~~~  335 (377)
T 3cbl_A          273 GLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT-----------------REFVEKGGRLP  335 (377)
T ss_dssp             SCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHH-----------------HHHHHTTCCCC
T ss_pred             CCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH-----------------HHHHHcCCCCC
Confidence            12235778999999998899999999999999999998 8999865432111                 11111111222


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      .+...+..+.+++.+||+.||++|||+++|++.|+.+.
T Consensus       336 ~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~  373 (377)
T 3cbl_A          336 CPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR  373 (377)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence            23334567889999999999999999999999998764

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=7.8e-40  Score=355.36  Aligned_cols=255  Identities=24%  Similarity=0.365  Sum_probs=207.4

Q ss_pred             hhhhhcCccccceEEEeeecC----CCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNM----GSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~----~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~  578 (792)
                      .+.+.||+|+||.||+|....    .+++.||||+++... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus        50 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  129 (343)
T 1luf_A           50 EYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLF  129 (343)
T ss_dssp             EEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             eeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEE
Confidence            345789999999999998753    345789999997643 334567999999999999999999999999999999999


Q ss_pred             EeccCCCccccccCC------------------------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEE
Q 003836          579 EFMSNGTVASFLFGD------------------------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNIL  634 (792)
Q Consensus       579 E~~~~gsL~~~l~~~------------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NIL  634 (792)
                      ||+++|+|.+++...                        ..+++..++.++.||+.||.|||++   +|+||||||+|||
T Consensus       130 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl  206 (343)
T 1luf_A          130 EYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCL  206 (343)
T ss_dssp             ECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             ecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEE
Confidence            999999999999653                        4678999999999999999999999   9999999999999


Q ss_pred             EcCCCCeEEeecCCCccccCCCC-CccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhh
Q 003836          635 LDDHYNARISDFGLAKLLTLDQS-HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDK  712 (792)
Q Consensus       635 l~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~  712 (792)
                      ++.++.+||+|||+++....... .......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||........ 
T Consensus       207 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~-  285 (343)
T 1luf_A          207 VGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEV-  285 (343)
T ss_dssp             ECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-
T ss_pred             ECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHH-
Confidence            99999999999999987643322 22234557899999999998899999999999999999999 9999865432110 


Q ss_pred             hhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          713 AILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                        .     ..        +.+. .....+...+..+.+++.+||+.+|++||++.+|++.|+++.+
T Consensus       286 --~-----~~--------~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~  335 (343)
T 1luf_A          286 --I-----YY--------VRDG-NILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE  335 (343)
T ss_dssp             --H-----HH--------HHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             --H-----HH--------HhCC-CcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence              0     00        0010 1111223345678899999999999999999999999998764

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=1e-39  Score=359.84  Aligned_cols=259  Identities=26%  Similarity=0.355  Sum_probs=210.2

Q ss_pred             HhhhhhhcCccccceEEEeeecC------CCceEEEEEEcccccc-cchHHHHHHHHHhccc-CCCCcccccceeccCCc
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNM------GSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQN  573 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~------~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~  573 (792)
                      .+.+.+.||+|+||+||+|....      .....||||++..... ...+.+.+|+++++++ +||||+++++++.+.+.
T Consensus        70 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~  149 (382)
T 3tt0_A           70 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGP  149 (382)
T ss_dssp             GEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             heEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCc
Confidence            34456789999999999997532      2346799999976433 3446799999999999 99999999999999999


Q ss_pred             eEEEEEeccCCCccccccCCC----------------CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC
Q 003836          574 RLLVYEFMSNGTVASFLFGDS----------------KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD  637 (792)
Q Consensus       574 ~~lV~E~~~~gsL~~~l~~~~----------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~  637 (792)
                      .++||||+++|+|.+++....                .+++..+..|+.||+.||+|||+.   +|+||||||+|||+++
T Consensus       150 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~  226 (382)
T 3tt0_A          150 LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTE  226 (382)
T ss_dssp             CEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECT
T ss_pred             eEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEEcC
Confidence            999999999999999996542                489999999999999999999998   9999999999999999


Q ss_pred             CCCeEEeecCCCccccCCCC-CccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhH
Q 003836          638 HYNARISDFGLAKLLTLDQS-HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAIL  715 (792)
Q Consensus       638 ~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~  715 (792)
                      ++.+||+|||+++....... .......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||.......     
T Consensus       227 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~-----  301 (382)
T 3tt0_A          227 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-----  301 (382)
T ss_dssp             TCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-----
T ss_pred             CCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-----
Confidence            99999999999987654332 22334457889999999999999999999999999999999 999986543211     


Q ss_pred             HHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCCC
Q 003836          716 TDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP  780 (792)
Q Consensus       716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~~  780 (792)
                                  +...+........+...+.++.+++.+||+.+|++|||++||++.|+.++...
T Consensus       302 ------------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~  354 (382)
T 3tt0_A          302 ------------LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT  354 (382)
T ss_dssp             ------------HHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred             ------------HHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence                        01111111122223344567889999999999999999999999998876443

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=4.6e-40  Score=360.43  Aligned_cols=255  Identities=29%  Similarity=0.347  Sum_probs=205.2

Q ss_pred             hhhhhhcCccccceEEEeeec----CCCceEEEEEEcccc-cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVN----MGSSNHVAVKKLNSV-FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLV  577 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~----~~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV  577 (792)
                      +.+.+.||+|+||.||+|.+.    ...++.||||++... .......+.+|+.++++++||||+++++++.+....++|
T Consensus        73 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv  152 (367)
T 3l9p_A           73 ITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFIL  152 (367)
T ss_dssp             EEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             eEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEE
Confidence            445678999999999999853    234678999999754 234456789999999999999999999999999999999


Q ss_pred             EEeccCCCccccccCC-------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCC---CeEEeecC
Q 003836          578 YEFMSNGTVASFLFGD-------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY---NARISDFG  647 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~---~~kl~Dfg  647 (792)
                      |||+++|+|.+++...       ..+++..++.++.||+.||+|||++   +|+||||||+|||++.++   .+||+|||
T Consensus       153 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~DFG  229 (367)
T 3l9p_A          153 LELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFG  229 (367)
T ss_dssp             EECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred             EEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEECCCc
Confidence            9999999999999653       3578999999999999999999999   999999999999999555   59999999


Q ss_pred             CCccccCCCC-CccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcc
Q 003836          648 LAKLLTLDQS-HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQE  725 (792)
Q Consensus       648 ~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~  725 (792)
                      +++....... .......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||........              
T Consensus       230 ~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~--------------  295 (367)
T 3l9p_A          230 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV--------------  295 (367)
T ss_dssp             HHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH--------------
T ss_pred             cccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH--------------
Confidence            9986533222 22334567899999999999999999999999999999998 9999865432111              


Q ss_pred             cchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          726 RTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       726 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                         ...+........+...+..+.+++.+||+.+|++|||++||++.|+.+.
T Consensus       296 ---~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~  344 (367)
T 3l9p_A          296 ---LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT  344 (367)
T ss_dssp             ---HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ---HHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence               0111111112223344567889999999999999999999999997754

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=1.2e-39  Score=367.07  Aligned_cols=255  Identities=26%  Similarity=0.405  Sum_probs=203.4

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      .+.++||+|+||.||+|....  +..||||+++... ...+.|.+|++++++++||||+++++++.+ +..++||||+++
T Consensus       187 ~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~  262 (452)
T 1fmk_A          187 RLEVKLGQGCFGEVWMGTWNG--TTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSK  262 (452)
T ss_dssp             EEEEEEEECSSCEEEEEEETT--TEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTT
T ss_pred             eeeeeecCCCCeEEEEEEECC--CceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcC
Confidence            455789999999999998753  3579999998643 345789999999999999999999999976 678999999999


Q ss_pred             CCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          584 GTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       584 gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      |+|.+++...  ..+++..+..++.||+.||+|||++   +|+||||||+|||+++++.+||+|||+++...........
T Consensus       263 gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~  339 (452)
T 1fmk_A          263 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ  339 (452)
T ss_dssp             CBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC-----------
T ss_pred             CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCceeccc
Confidence            9999999753  5689999999999999999999998   9999999999999999999999999999876543333333


Q ss_pred             cccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ...+++.|+|||.+....++.++||||||+++|||++ |+.||........                 ...+........
T Consensus       340 ~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~-----------------~~~i~~~~~~~~  402 (452)
T 1fmk_A          340 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV-----------------LDQVERGYRMPC  402 (452)
T ss_dssp             ---CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH-----------------HHHHHTTCCCCC
T ss_pred             CCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHH-----------------HHHHHcCCCCCC
Confidence            4457789999999999999999999999999999999 8999865432110                 011111122223


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCCCCC
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPIP  782 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~~~p  782 (792)
                      +...+..+.+++.+||+.+|++|||+++|++.|+.+..-..|
T Consensus       403 ~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~  444 (452)
T 1fmk_A          403 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP  444 (452)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCC
T ss_pred             CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCc
Confidence            344567889999999999999999999999999998654443

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=7e-40  Score=345.43  Aligned_cols=254  Identities=21%  Similarity=0.298  Sum_probs=194.0

Q ss_pred             hhhhhhcCccccceEEEeeecCC--CceEEEEEEcccccc-cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMG--SSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~--~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +.+.+.||+|+||.||+|.....  ....||+|++..... ...+.+.+|+.++++++||||+++++++. .+..++|||
T Consensus        17 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e   95 (281)
T 1mp8_A           17 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIME   95 (281)
T ss_dssp             EEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred             eEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEEEe
Confidence            44567899999999999976432  345799999876432 34567999999999999999999999985 467899999


Q ss_pred             eccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          580 FMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       580 ~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      |+++++|.+++... ..+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++........
T Consensus        96 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  172 (281)
T 1mp8_A           96 LCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY  172 (281)
T ss_dssp             CCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-------------
T ss_pred             cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccCccccc
Confidence            99999999999765 3689999999999999999999998   9999999999999999999999999999876544333


Q ss_pred             ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhc
Q 003836          659 TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLE  737 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  737 (792)
                      ......+++.|+|||.+....++.++||||||+++|||++ |+.||........   . .            . +.....
T Consensus       173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~---~-~------------~-i~~~~~  235 (281)
T 1mp8_A          173 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV---I-G------------R-IENGER  235 (281)
T ss_dssp             ------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH---H-H------------H-HHTTCC
T ss_pred             ccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHH---H-H------------H-HHcCCC
Confidence            3334457889999999998899999999999999999997 8889865432211   0 0            0 001111


Q ss_pred             ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          738 AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       738 ~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      ...+...+..+.+++.+||+.||++|||+.|+++.|+.++
T Consensus       236 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  275 (281)
T 1mp8_A          236 LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL  275 (281)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            1123344567889999999999999999999999998764

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=4.2e-40  Score=350.78  Aligned_cols=270  Identities=23%  Similarity=0.335  Sum_probs=208.8

Q ss_pred             hhhhhhcCccccceEEEeee---cCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccC--CceEE
Q 003836          503 RGFKEELGRGAFGTVYKGFV---NMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEG--QNRLL  576 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~---~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~--~~~~l  576 (792)
                      +.+.+.||+|+||.||++.+   +..+++.||+|++.... ....+.+.+|++++++++||||+++++++.+.  ...++
T Consensus        23 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l  102 (302)
T 4e5w_A           23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL  102 (302)
T ss_dssp             EEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEE
T ss_pred             hhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEE
Confidence            44567899999999999974   34567899999997543 33457899999999999999999999999876  67899


Q ss_pred             EEEeccCCCccccccC-CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCC
Q 003836          577 VYEFMSNGTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD  655 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~  655 (792)
                      ||||+++|+|.+++.. ...+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus       103 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  179 (302)
T 4e5w_A          103 IMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD  179 (302)
T ss_dssp             EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred             EEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccccccCC
Confidence            9999999999999954 45789999999999999999999998   9999999999999999999999999999876544


Q ss_pred             CC--CccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhh
Q 003836          656 QS--HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVE  733 (792)
Q Consensus       656 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  733 (792)
                      ..  .......+|..|+|||.+.+..++.++||||||+++|||++|+.|+............  ..........+...+.
T Consensus       180 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  257 (302)
T 4e5w_A          180 KEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIG--PTHGQMTVTRLVNTLK  257 (302)
T ss_dssp             CCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHC--SCCGGGHHHHHHHHHH
T ss_pred             CcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccC--CcccccCHHHHHHHHh
Confidence            32  1223456788899999999999999999999999999999999886443211100000  0000000011112222


Q ss_pred             chhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          734 NDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       734 ~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      .......+...+..+.+++.+||+.||.+|||++|++++|+.++
T Consensus       258 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          258 EGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence            22223334455678999999999999999999999999998764

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.1e-39  Score=354.51  Aligned_cols=257  Identities=26%  Similarity=0.376  Sum_probs=207.3

Q ss_pred             hhhhhhcCccccceEEEeee----cCCCceEEEEEEccccc-ccchHHHHHHHHHhccc-CCCCcccccceeccCCceEE
Q 003836          503 RGFKEELGRGAFGTVYKGFV----NMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLL  576 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~----~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~l  576 (792)
                      +.+.+.||+|+||.||+|..    ..+.++.||||++.... ....+.+.+|+.++.++ +||||+++++++...+..++
T Consensus        47 y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l  126 (344)
T 1rjb_A           47 LEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYL  126 (344)
T ss_dssp             EEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             ceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEE
Confidence            44567899999999999986    23456789999997542 33457899999999999 89999999999999999999


Q ss_pred             EEEeccCCCccccccCCC-----------------------CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcE
Q 003836          577 VYEFMSNGTVASFLFGDS-----------------------KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNI  633 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~~-----------------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NI  633 (792)
                      ||||+++|+|.+++....                       .+++..+..++.||+.||+|||+.   +|+||||||+||
T Consensus       127 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NI  203 (344)
T 1rjb_A          127 IFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNV  203 (344)
T ss_dssp             EEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSGGGE
T ss_pred             EEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhE
Confidence            999999999999997643                       268899999999999999999998   999999999999


Q ss_pred             EEcCCCCeEEeecCCCccccCCCCCc-cccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhh
Q 003836          634 LLDDHYNARISDFGLAKLLTLDQSHT-NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVD  711 (792)
Q Consensus       634 Ll~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~  711 (792)
                      |++.++.+||+|||+++......... .....+|+.|+|||.+.+..++.++||||||+++|||+| |+.||........
T Consensus       204 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~  283 (344)
T 1rjb_A          204 LVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN  283 (344)
T ss_dssp             EEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH
T ss_pred             EEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHH
Confidence            99999999999999998765443322 233457889999999999999999999999999999998 9999965432211


Q ss_pred             hhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          712 KAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       712 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                                      ....+........+...+..+.+++.+||+.||.+|||+.|+++.|+.++.
T Consensus       284 ----------------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~  334 (344)
T 1rjb_A          284 ----------------FYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA  334 (344)
T ss_dssp             ----------------HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             ----------------HHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence                            011111112222233345678899999999999999999999999988654

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=2.6e-40  Score=350.01  Aligned_cols=253  Identities=23%  Similarity=0.384  Sum_probs=203.4

Q ss_pred             hhhhhhcCccccceEEEeeecCCC------ceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGS------SNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLL  576 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~------~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~l  576 (792)
                      +.+.+.||+|+||+||+|......      ...||+|++........+.+.+|++++++++||||+++++++.+++..++
T Consensus        10 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   89 (289)
T 4fvq_A           10 LIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENIL   89 (289)
T ss_dssp             EEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEE
T ss_pred             eeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEE
Confidence            445678999999999999765332      25799999987766777889999999999999999999999999999999


Q ss_pred             EEEeccCCCccccccCCC-CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCC--------eEEeecC
Q 003836          577 VYEFMSNGTVASFLFGDS-KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYN--------ARISDFG  647 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~~-~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~--------~kl~Dfg  647 (792)
                      ||||+++|+|.+++.... .+++..+..++.||+.||+|||++   +|+||||||+|||++.++.        +||+|||
T Consensus        90 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg  166 (289)
T 4fvq_A           90 VQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG  166 (289)
T ss_dssp             EEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCC
T ss_pred             EEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceeeeccCc
Confidence            999999999999997764 489999999999999999999999   9999999999999998887        9999999


Q ss_pred             CCccccCCCCCccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhccc
Q 003836          648 LAKLLTLDQSHTNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQER  726 (792)
Q Consensus       648 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~  726 (792)
                      +++....     .....+|+.|+|||.+.+ ..++.++||||||+++|||++|+.|+............           
T Consensus       167 ~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~-----------  230 (289)
T 4fvq_A          167 ISITVLP-----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQF-----------  230 (289)
T ss_dssp             SCTTTSC-----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH-----------
T ss_pred             ccccccC-----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHH-----------
Confidence            9875432     223457899999999987 77999999999999999999976655433221110000           


Q ss_pred             chhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCCCC
Q 003836          727 TLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPI  781 (792)
Q Consensus       727 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~~~  781 (792)
                           ...  ....+...+.++.+++.+||+.||++|||++|+++.|+.+..-..
T Consensus       231 -----~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~  278 (289)
T 4fvq_A          231 -----YED--RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDL  278 (289)
T ss_dssp             -----HHT--TCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC----
T ss_pred             -----hhc--cCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCC
Confidence                 000  001111124467889999999999999999999999999876443

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=8.1e-40  Score=350.39  Aligned_cols=256  Identities=25%  Similarity=0.402  Sum_probs=209.7

Q ss_pred             hhhhhhcCccccceEEEeee----cCCCceEEEEEEcccccc-cchHHHHHHHHHhccc-CCCCcccccceeccCCceEE
Q 003836          503 RGFKEELGRGAFGTVYKGFV----NMGSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLL  576 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~----~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~l  576 (792)
                      +.+.+.||+|+||.||+|..    +..+++.||||++..... ...+.+.+|++++.++ +||||+++++++.+.+..++
T Consensus        25 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l  104 (313)
T 1t46_A           25 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLV  104 (313)
T ss_dssp             EEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             hhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEE
Confidence            44567899999999999975    345678999999975433 3457799999999999 99999999999999999999


Q ss_pred             EEEeccCCCccccccCCC------------------CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC
Q 003836          577 VYEFMSNGTVASFLFGDS------------------KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH  638 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~~------------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~  638 (792)
                      ||||+++|+|.+++....                  .+++..+..++.||+.||+|||+.   +|+||||||+|||++.+
T Consensus       105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~  181 (313)
T 1t46_A          105 ITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHG  181 (313)
T ss_dssp             EEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEETT
T ss_pred             EEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEcCC
Confidence            999999999999997543                  388999999999999999999999   99999999999999999


Q ss_pred             CCeEEeecCCCccccCCCCCc-cccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHH
Q 003836          639 YNARISDFGLAKLLTLDQSHT-NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILT  716 (792)
Q Consensus       639 ~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~  716 (792)
                      +.+||+|||+++......... .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||........     
T Consensus       182 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-----  256 (313)
T 1t46_A          182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-----  256 (313)
T ss_dssp             TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH-----
T ss_pred             CCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH-----
Confidence            999999999998765443322 223457889999999999999999999999999999999 9999865432211     


Q ss_pred             HHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          717 DWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                                 ....+........+...+..+.+++.+||+.||.+|||++|++++|++++
T Consensus       257 -----------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  306 (313)
T 1t46_A          257 -----------FYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI  306 (313)
T ss_dssp             -----------HHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             -----------HHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence                       01111111112222334567889999999999999999999999998764

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=1.8e-39  Score=347.82  Aligned_cols=255  Identities=25%  Similarity=0.355  Sum_probs=207.8

Q ss_pred             hhhhhhcCccccceEEEeeec----CCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVN----MGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLV  577 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~----~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV  577 (792)
                      +.+.+.||+|+||.||++...    ..+++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus        25 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv  104 (314)
T 2ivs_A           25 LVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLI  104 (314)
T ss_dssp             EEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             eeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEE
Confidence            334578999999999999753    2345789999997543 33456789999999999999999999999999999999


Q ss_pred             EEeccCCCccccccCCC------------------------CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcE
Q 003836          578 YEFMSNGTVASFLFGDS------------------------KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNI  633 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~~------------------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NI  633 (792)
                      |||+++++|.+++....                        .+++..+..++.||+.||+|||++   +|+||||||+||
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp~NI  181 (314)
T 2ivs_A          105 VEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNI  181 (314)
T ss_dssp             EECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGE
T ss_pred             EeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccchheE
Confidence            99999999999997543                        378899999999999999999998   999999999999


Q ss_pred             EEcCCCCeEEeecCCCccccCCCCC-ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhh
Q 003836          634 LLDDHYNARISDFGLAKLLTLDQSH-TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVD  711 (792)
Q Consensus       634 Ll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~  711 (792)
                      |+++++.+||+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||........
T Consensus       182 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~  261 (314)
T 2ivs_A          182 LVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL  261 (314)
T ss_dssp             EEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred             EEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence            9999999999999999876543322 2223457889999999998899999999999999999999 9999865432111


Q ss_pred             hhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          712 KAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       712 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                                       ...+........+...+..+.+++.+||+.||++||++.|+++.|++++
T Consensus       262 -----------------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~  310 (314)
T 2ivs_A          262 -----------------FNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM  310 (314)
T ss_dssp             -----------------HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             -----------------HHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence                             1111111112223345577899999999999999999999999998864

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=3.7e-39  Score=341.93  Aligned_cols=261  Identities=20%  Similarity=0.237  Sum_probs=198.2

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .+.+.||+|+||+||+|... .+++.||+|++....  ....+.+.+|+.++++++||||+++++++.+++..++||||+
T Consensus         5 ~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   83 (292)
T 3o0g_A            5 EKLEKIGEGTYGTVFKAKNR-ETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC   83 (292)
T ss_dssp             EEEEEEEECSSSEEEEEEET-TTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             eeeeEecCCCCeEEEEEEEC-CCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecC
Confidence            44578999999999999754 456799999987543  233477899999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      +++.+..+......+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++...... ....
T Consensus        84 ~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~  159 (292)
T 3o0g_A           84 DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV-RCYS  159 (292)
T ss_dssp             SEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC-SCCC
T ss_pred             CCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCcc-cccc
Confidence            8754444444467899999999999999999999999   99999999999999999999999999998764332 2233


Q ss_pred             cccccCCcccccccccCC-CCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhh--cccc---hhHhhhc-
Q 003836          662 AIRGTKGYVAPEWFRNMP-ITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRY--QERT---LEALVEN-  734 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~-~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~-  734 (792)
                      ...||+.|+|||.+.+.. ++.++|||||||++|||++|+.|+.........  +........  ....   .....+. 
T Consensus       160 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~  237 (292)
T 3o0g_A          160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ--LKRIFRLLGTPTEEQWPSMTKLPDYK  237 (292)
T ss_dssp             SCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHH--HHHHHHHHCCCCTTTCTTGGGSTTCC
T ss_pred             CCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHH--HHHHHHHhCCCChhhhhhhccccccc
Confidence            456899999999997765 899999999999999999999986543322111  111100000  0000   0000000 


Q ss_pred             --------hhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          735 --------DLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       735 --------~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                              .............+.+++.+||+.||++|||++|+++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             CCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence                    0000111234567889999999999999999999997

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=3.3e-39  Score=355.24  Aligned_cols=254  Identities=22%  Similarity=0.291  Sum_probs=201.6

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      .+.++||+|+||.||++... .+++.+|+|++++..   ....+.+.+|..++.++ +||||+++++++.+.+..++|||
T Consensus        55 ~~~~~LG~G~fG~V~~~~~~-~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E  133 (396)
T 4dc2_A           55 DLLRVIGRGSYAKVLLVRLK-KTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIE  133 (396)
T ss_dssp             EEEEEEEECSSEEEEEEEET-TTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred             EEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEE
Confidence            44578999999999999764 457899999997643   22334688999999887 89999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      |+++|+|..++.....+++..+..++.||+.||+|||++   +|+||||||+||||+.++.+||+|||+++..... ...
T Consensus       134 ~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~-~~~  209 (396)
T 4dc2_A          134 YVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GDT  209 (396)
T ss_dssp             CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT-TCC
T ss_pred             cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecccC-CCc
Confidence            999999999998888899999999999999999999999   9999999999999999999999999999864322 223


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhh-hhHHHHHHHhhcccchhHhhhchhcc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDK-AILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      ....+||+.|+|||++.+..++.++|||||||++|||++|+.||......... .......        ...+....  .
T Consensus       210 ~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~--------~~~i~~~~--~  279 (396)
T 4dc2_A          210 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL--------FQVILEKQ--I  279 (396)
T ss_dssp             BCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHH--------HHHHHHCC--C
T ss_pred             cccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHH--------HHHHhccc--c
Confidence            34567999999999999999999999999999999999999999643211100 0000000        11111111  1


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCH------HhHHHH
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTM------RKVTQM  772 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~------~evl~~  772 (792)
                      ..+...+.++.+++.+||+.||.+||++      +||++.
T Consensus       280 ~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H  319 (396)
T 4dc2_A          280 RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH  319 (396)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred             CCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence            1233456678899999999999999995      566653

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=2.3e-39  Score=364.62  Aligned_cols=245  Identities=27%  Similarity=0.371  Sum_probs=202.0

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCC-ceEEEEEeccC
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQ-NRLLVYEFMSN  583 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~-~~~lV~E~~~~  583 (792)
                      +.+.||+|+||.||+|...   ++.||||+++...  ..+.|.+|++++++++||||+++++++.+.+ ..++||||+++
T Consensus       197 ~~~~lG~G~fg~V~~~~~~---~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~  271 (450)
T 1k9a_A          197 LLQTIGKGEFGDVMLGDYR---GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAK  271 (450)
T ss_dssp             EEEEEEECSSEEEEEEEET---TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTT
T ss_pred             EEeeecCcCCeeEEEEEec---CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCC
Confidence            4578999999999999764   4689999997643  5678999999999999999999999987665 78999999999


Q ss_pred             CCccccccCCC--CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          584 GTVASFLFGDS--KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       584 gsL~~~l~~~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      |+|.+++....  .+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++.....    ..
T Consensus       272 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~  344 (450)
T 1k9a_A          272 GSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----QD  344 (450)
T ss_dssp             CBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC--------
T ss_pred             CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccccc----cc
Confidence            99999997653  378999999999999999999999   9999999999999999999999999999854322    12


Q ss_pred             cccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ...+++.|+|||.+.+..++.++||||||+++|||++ |+.||........                 ...+........
T Consensus       345 ~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~-----------------~~~i~~~~~~~~  407 (450)
T 1k9a_A          345 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV-----------------VPRVEKGYKMDA  407 (450)
T ss_dssp             --CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTH-----------------HHHHHTTCCCCC
T ss_pred             CCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH-----------------HHHHHcCCCCCC
Confidence            2356889999999999999999999999999999998 9999865422110                 011111122223


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                      +...+..+.+++.+||+.||++|||+.++++.|+.+..
T Consensus       408 p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~  445 (450)
T 1k9a_A          408 PDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT  445 (450)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence            34456788999999999999999999999999987643

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=9.5e-40  Score=355.27  Aligned_cols=246  Identities=24%  Similarity=0.333  Sum_probs=199.7

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccc---cccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV---FQDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~  578 (792)
                      +.+.+.||+|+||+||++... .+++.||||++++.   .....+.+.+|.+++.++ +||||+++++++.+.+..++||
T Consensus        25 y~~~~~lG~G~fg~V~~~~~~-~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~  103 (353)
T 3txo_A           25 FEFIRVLGKGSFGKVMLARVK-ETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVM  103 (353)
T ss_dssp             EEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             eEEEEEEeeCCCEEEEEEEEc-CCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEE
Confidence            345678999999999999754 45689999999753   233456788999999988 7999999999999999999999


Q ss_pred             EeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          579 EFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       579 E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      ||+++|+|..++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++..... ..
T Consensus       104 E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~-~~  179 (353)
T 3txo_A          104 EFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN-GV  179 (353)
T ss_dssp             ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC----
T ss_pred             eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeecccC-Cc
Confidence            9999999999998888899999999999999999999999   9999999999999999999999999999864322 22


Q ss_pred             ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          659 TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.........                ..+.....  
T Consensus       180 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~----------------~~i~~~~~--  241 (353)
T 3txo_A          180 TTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLF----------------EAILNDEV--  241 (353)
T ss_dssp             ------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----------------HHHHHCCC--
T ss_pred             cccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHH----------------HHHHcCCC--
Confidence            334567999999999999989999999999999999999999999765332110                11111111  


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCH------HhHHH
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTM------RKVTQ  771 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~------~evl~  771 (792)
                      ..+...+..+.+++.+||+.||++||++      +|+++
T Consensus       242 ~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          242 VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred             CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence            1223345678899999999999999998      67775

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=6.5e-39  Score=358.82  Aligned_cols=249  Identities=21%  Similarity=0.275  Sum_probs=202.8

Q ss_pred             HhhhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      .+.+.+.||+|+||+||++.. ..+++.+|+|++....  ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus        12 ~Y~i~~~LG~G~fg~V~~~~~-~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E   90 (444)
T 3soa_A           12 EYQLFEELGKGAFSVVRRCVK-VLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFD   90 (444)
T ss_dssp             HEEEEEEEEEC--CEEEEEEE-TTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred             CeEEEEEeccCCCeEEEEEEE-CCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEE
Confidence            455668899999999999964 4567899999987543  2335678999999999999999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEc---CCCCeEEeecCCCccccCCC
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLD---DHYNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~---~~~~~kl~Dfg~a~~~~~~~  656 (792)
                      |+++|+|.+++.....+++..+..++.||+.||.|||++   +|+||||||+|||++   +++.+||+|||+++......
T Consensus        91 ~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~  167 (444)
T 3soa_A           91 LVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ  167 (444)
T ss_dssp             CCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTC
T ss_pred             eCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCC
Confidence            999999999998888899999999999999999999999   999999999999998   56789999999998765432


Q ss_pred             CCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          657 SHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       657 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                      . ......||+.|+|||.+.+..++.++|||||||++|+|++|+.||........   ...             +.....
T Consensus       168 ~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~---~~~-------------i~~~~~  230 (444)
T 3soa_A          168 Q-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRL---YQQ-------------IKAGAY  230 (444)
T ss_dssp             C-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHH-------------HHHTCC
T ss_pred             c-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHH---HHH-------------HHhCCC
Confidence            2 22345799999999999999999999999999999999999999965432211   100             011100


Q ss_pred             c--ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          737 E--AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       737 ~--~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .  .......+.++.+++.+||+.||++|||+.|+++
T Consensus       231 ~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~  267 (444)
T 3soa_A          231 DFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALK  267 (444)
T ss_dssp             CCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            0  0011123567889999999999999999999998

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=9.3e-39  Score=343.36  Aligned_cols=268  Identities=19%  Similarity=0.254  Sum_probs=208.2

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCC--ceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQ--NRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~--~~~lV~E  579 (792)
                      +.+.+.||+|+||+||+|... .+++.||||++.... ....+.+.+|++++++++||||+++++++....  ..++|||
T Consensus        11 y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e   89 (319)
T 4euu_A           11 WLLSDILGQGATANVFRGRHK-KTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME   89 (319)
T ss_dssp             EEEEEEEEECSSEEEEEEEET-TTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEE
T ss_pred             EEEEEEecCCCCeEEEEEEEC-CCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEe
Confidence            345678999999999999764 456799999997543 334577889999999999999999999987655  7799999


Q ss_pred             eccCCCccccccCCC---CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEE----cCCCCeEEeecCCCccc
Q 003836          580 FMSNGTVASFLFGDS---KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILL----DDHYNARISDFGLAKLL  652 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~---~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl----~~~~~~kl~Dfg~a~~~  652 (792)
                      |+++++|.+++....   .+++..+..++.||+.||+|||+.   +|+||||||+|||+    +.++.+||+|||+++..
T Consensus        90 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~  166 (319)
T 4euu_A           90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL  166 (319)
T ss_dssp             CCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEEC
T ss_pred             CCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCceec
Confidence            999999999997653   389999999999999999999999   99999999999999    78888999999999876


Q ss_pred             cCCCCCccccccccCCcccccccc--------cCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhh-hhHHHHHHHhh
Q 003836          653 TLDQSHTNTAIRGTKGYVAPEWFR--------NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDK-AILTDWAYDRY  723 (792)
Q Consensus       653 ~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~-~~~~~~~~~~~  723 (792)
                      .....  .....||+.|+|||.+.        +..++.++|||||||++|||++|+.||......... ..+....... 
T Consensus       167 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-  243 (319)
T 4euu_A          167 EDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK-  243 (319)
T ss_dssp             CTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHC-
T ss_pred             CCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCC-
Confidence            54332  23456899999999986        578899999999999999999999999643322111 1111111110 


Q ss_pred             cccch---hHhhh--------chhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          724 QERTL---EALVE--------NDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       724 ~~~~~---~~~~~--------~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      .....   .....        -.............+.+++.+||+.||++|||++|+++...+..
T Consensus       244 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~  308 (319)
T 4euu_A          244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL  308 (319)
T ss_dssp             CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred             CcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence            00000   00000        01112345677888999999999999999999999999887644

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=2.6e-39  Score=338.98  Aligned_cols=250  Identities=29%  Similarity=0.409  Sum_probs=192.5

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccc----cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ----DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~----~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      .+.+.||+|+||.||+|...   ++.+|||++.....    ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus        10 ~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (271)
T 3dtc_A           10 TLEEIIGIGGFGKVYRAFWI---GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVME   86 (271)
T ss_dssp             EEEEEEEEETTEEEEEEEET---TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEE
T ss_pred             eeeeeeccCCCeEEEEEEEc---CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEE
Confidence            34578999999999999753   57899999875432    234678999999999999999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC--------CCCeEEeecCCCcc
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD--------HYNARISDFGLAKL  651 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~--------~~~~kl~Dfg~a~~  651 (792)
                      |+++++|.+++.. ..+++..+..++.|++.||+|||++...+|+||||||+|||++.        ++.+||+|||+++.
T Consensus        87 ~~~~~~L~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~  165 (271)
T 3dtc_A           87 FARGGPLNRVLSG-KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE  165 (271)
T ss_dssp             CCTTEEHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC---
T ss_pred             cCCCCCHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccc
Confidence            9999999999854 57899999999999999999999982222999999999999986        77899999999986


Q ss_pred             ccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHh
Q 003836          652 LTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEAL  731 (792)
Q Consensus       652 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  731 (792)
                      ......   ....||+.|+|||.+.+..++.++||||||+++|||++|+.||.........                ...
T Consensus       166 ~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~----------------~~~  226 (271)
T 3dtc_A          166 WHRTTK---MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVA----------------YGV  226 (271)
T ss_dssp             -------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHH----------------HHH
T ss_pred             cccccc---cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH----------------Hhh
Confidence            543222   2346899999999999999999999999999999999999999754322110                011


Q ss_pred             hhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          732 VENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       732 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                      .........+...+..+.+++.+||+.+|++|||++|++++|+.+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          227 AMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             HTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             hcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence            111112222334456788999999999999999999999999864

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=7.9e-40  Score=346.16  Aligned_cols=253  Identities=27%  Similarity=0.396  Sum_probs=211.0

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.+.||+|+||+||+|... ..++.||+|++... ....+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus        15 ~~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~   92 (288)
T 3kfa_A           15 ITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT   92 (288)
T ss_dssp             EEEEEESGGGTTCSEEEEEEG-GGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             eeEEeecCCCCceeEEEeEec-CCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCC
Confidence            445678999999999999765 45678999998754 3456789999999999999999999999999999999999999


Q ss_pred             CCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          583 NGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       583 ~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +++|.+++...  ..+++..+..++.||+.||+|||+.   +|+|+||||+|||++.++.+||+|||+++..........
T Consensus        93 ~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  169 (288)
T 3kfa_A           93 YGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH  169 (288)
T ss_dssp             TEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEE
T ss_pred             CCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCCccccc
Confidence            99999999753  4589999999999999999999999   999999999999999999999999999987765544444


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      ....+++.|+|||.+.+..++.++||||||+++|+|++ |..||.......                 +...+.......
T Consensus       170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~-----------------~~~~~~~~~~~~  232 (288)
T 3kfa_A          170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-----------------VYELLEKDYRME  232 (288)
T ss_dssp             TTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG-----------------HHHHHHTTCCCC
T ss_pred             cCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-----------------HHHHHhccCCCC
Confidence            44567889999999998999999999999999999999 888886542211                 111111222222


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      .+...+..+.+++.+||+.||.+|||++|+++.|+.+.
T Consensus       233 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~  270 (288)
T 3kfa_A          233 RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  270 (288)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHH
Confidence            33345577899999999999999999999999997753

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=8.9e-39  Score=340.02  Aligned_cols=247  Identities=21%  Similarity=0.309  Sum_probs=193.7

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccc--------------------------cchHHHHHHHHHhccc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ--------------------------DSEKEFKAEVNGIGQT  556 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~~Ei~~l~~l  556 (792)
                      +.+.+.||+|+||.||+|... .+++.||||++.....                          ...+.+.+|+++++++
T Consensus        15 y~~~~~lG~G~~g~Vy~a~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l   93 (298)
T 2zv2_A           15 YTLKDEIGKGSYGVVKLAYNE-NDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKL   93 (298)
T ss_dssp             EEEEEEEEC--CCEEEEEEET-TTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTC
T ss_pred             eEEEeEEeecCCEEEEEEEEC-CCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhC
Confidence            345678999999999999754 4578999999865321                          1135688999999999


Q ss_pred             CCCCcccccceecc--CCceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEE
Q 003836          557 HHKNLVRLLGYCDE--GQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNIL  634 (792)
Q Consensus       557 ~h~niv~l~g~~~~--~~~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NIL  634 (792)
                      +||||+++++++.+  ....++||||+++++|.+++. ...+++..+..++.||+.||+|||+.   +|+||||||+|||
T Consensus        94 ~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil  169 (298)
T 2zv2_A           94 DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-LKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLL  169 (298)
T ss_dssp             CCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC-SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEE
T ss_pred             CCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEE
Confidence            99999999999976  567899999999999999764 35689999999999999999999999   9999999999999


Q ss_pred             EcCCCCeEEeecCCCccccCCCCCccccccccCCcccccccccCC---CCcccceehHHHHHHHHHhcCcCCCcchhhhh
Q 003836          635 LDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMP---ITVKVDVYSYGVLLLEIICLRRNIDNEISKVD  711 (792)
Q Consensus       635 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~  711 (792)
                      ++.++.+||+|||+++....... ......||+.|+|||.+.+..   .+.++||||||+++|||++|+.||........
T Consensus       170 ~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~  248 (298)
T 2zv2_A          170 VGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCL  248 (298)
T ss_dssp             ECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             ECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHH
Confidence            99999999999999987653322 223456899999999997655   47889999999999999999999975432110


Q ss_pred             hhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          712 KAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       712 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                         .     .        .+.............+..+.+++.+||+.||++|||++|+++
T Consensus       249 ---~-----~--------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          249 ---H-----S--------KIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             ---H-----H--------HHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             ---H-----H--------HHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence               0     0        001111111111234567889999999999999999999976

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=1.1e-39  Score=351.75  Aligned_cols=270  Identities=23%  Similarity=0.322  Sum_probs=214.0

Q ss_pred             hhhhhhcCccccceEEEeee---cCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceec--cCCceEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFV---NMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCD--EGQNRLLV  577 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~---~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~--~~~~~~lV  577 (792)
                      +.+.+.||+|+||.||++.+   +...++.||||++........+.+.+|++++++++|+||+++++++.  +....++|
T Consensus        25 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv  104 (327)
T 3lxl_A           25 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLV  104 (327)
T ss_dssp             EEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEE
T ss_pred             hhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEE
Confidence            34567899999999999975   34567899999998776666778999999999999999999999886  45668899


Q ss_pred             EEeccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC
Q 003836          578 YEFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~  656 (792)
                      |||+++++|.+++... ..+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++......
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~  181 (327)
T 3lxl_A          105 MEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK  181 (327)
T ss_dssp             EECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEECCTTC
T ss_pred             EeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceecccCC
Confidence            9999999999999763 5689999999999999999999998   99999999999999999999999999998765433


Q ss_pred             CC--ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhc
Q 003836          657 SH--TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEN  734 (792)
Q Consensus       657 ~~--~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  734 (792)
                      ..  ......+|+.|+|||.+.+..++.++||||||+++|||++|+.||............  ..........+...+..
T Consensus       182 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  259 (327)
T 3lxl_A          182 DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMG--CERDVPALSRLLELLEE  259 (327)
T ss_dssp             SEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC------CCHHHHHHHHHHT
T ss_pred             ccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcc--cccccccHHHHHHHhhc
Confidence            22  223345788899999999989999999999999999999999998654322110000  00000000112223333


Q ss_pred             hhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          735 DLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       735 ~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      ......+...+..+.+++.+||+.||++|||++|++++|+.+.
T Consensus       260 ~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~  302 (327)
T 3lxl_A          260 GQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLW  302 (327)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-
T ss_pred             ccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            3333344556778999999999999999999999999998875

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=5.5e-39  Score=344.40  Aligned_cols=243  Identities=23%  Similarity=0.323  Sum_probs=203.3

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      .+.+.||+|+||.||++... .+++.||+|++++..   ....+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus         9 ~~~~~lG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~   87 (318)
T 1fot_A            9 QILRTLGTGSFGRVHLIRSR-HNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDY   87 (318)
T ss_dssp             EEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECC
T ss_pred             EEEEEEeeCCCEEEEEEEEC-CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeC
Confidence            34578999999999999754 457899999987532   23456788999999999999999999999999999999999


Q ss_pred             ccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          581 MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       581 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +++|+|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++....    ..
T Consensus        88 ~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~----~~  160 (318)
T 1fot_A           88 IEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VT  160 (318)
T ss_dssp             CCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS----CB
T ss_pred             CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCC----cc
Confidence            99999999998888899999999999999999999998   999999999999999999999999999986542    22


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ....||+.|+|||.+.+..++.++|||||||++|||++|+.||........                ...++....  ..
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~----------------~~~i~~~~~--~~  222 (318)
T 1fot_A          161 YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT----------------YEKILNAEL--RF  222 (318)
T ss_dssp             CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH----------------HHHHHHCCC--CC
T ss_pred             ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH----------------HHHHHhCCC--CC
Confidence            345799999999999999999999999999999999999999975432111                011111111  12


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCC-----CHHhHHHH
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRP-----TMRKVTQM  772 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RP-----s~~evl~~  772 (792)
                      +...+.++.+++.+||+.||++||     +++|+++.
T Consensus       223 p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h  259 (318)
T 1fot_A          223 PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH  259 (318)
T ss_dssp             CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             CCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence            223456788999999999999999     89999854

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=6.9e-39  Score=351.46  Aligned_cols=248  Identities=25%  Similarity=0.336  Sum_probs=203.5

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +.+.+.||+|+||.||++... .+++.||+|++.+..   ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus        17 y~i~~~LG~G~fG~V~~~~~~-~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e   95 (384)
T 4fr4_A           17 FEILRAIGKGSFGKVCIVQKN-DTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVD   95 (384)
T ss_dssp             EEEEEEEECCTTCCEEEEEET-TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             eEEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEe
Confidence            345678999999999999754 567899999986532   3345788999999999999999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      |+++|+|..++.....+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++.....  ..
T Consensus        96 ~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~--~~  170 (384)
T 4fr4_A           96 LLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE--TQ  170 (384)
T ss_dssp             CCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT--CC
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCC--Cc
Confidence            999999999998888899999999999999999999999   9999999999999999999999999999876432  23


Q ss_pred             cccccccCCccccccccc---CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          660 NTAIRGTKGYVAPEWFRN---MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~---~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                      .....||+.|+|||++..   ..++.++|||||||++|||++|+.||..............             +..  .
T Consensus       171 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~-------------~~~--~  235 (384)
T 4fr4_A          171 ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHT-------------FET--T  235 (384)
T ss_dssp             BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHH-------------HHH--C
T ss_pred             eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHH-------------Hhh--c
Confidence            345679999999999964   4589999999999999999999999975432211111100             000  0


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCCCCC-HHhHHH
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPT-MRKVTQ  771 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs-~~evl~  771 (792)
                      ....+...+..+.+++.+||+.||.+||+ +++|++
T Consensus       236 ~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          236 VVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             CCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             ccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence            11123344577899999999999999998 777765

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=9.1e-39  Score=337.91  Aligned_cols=250  Identities=26%  Similarity=0.414  Sum_probs=200.6

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccc-------hHHHHHHHHHhcccCCCCcccccceeccCCceE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS-------EKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRL  575 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~-------~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~  575 (792)
                      +.+.+.||+|+||+||+|... .+++.||+|++.......       .+.+.+|++++++++||||+++++++.+..  +
T Consensus        21 y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~   97 (287)
T 4f0f_A           21 IEYEKQIGKGGFGLVHKGRLV-KDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--R   97 (287)
T ss_dssp             EEEEEECCCCSSSCEEEEEET-TTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--E
T ss_pred             ceehhccccCCceeEEEEEEc-CCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--e
Confidence            345578999999999999764 456789999986543222       167899999999999999999999997665  6


Q ss_pred             EEEEeccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCC--eEecCCCCCcEEEcCCCC-----eEEeecC
Q 003836          576 LVYEFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQ--IIHCDIKPQNILLDDHYN-----ARISDFG  647 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivH~dikp~NILl~~~~~-----~kl~Dfg  647 (792)
                      +||||+++|+|.+++... ..+++..+..++.|++.||+|||+.   +  |+||||||+|||++.++.     +||+|||
T Consensus        98 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg  174 (287)
T 4f0f_A           98 MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG  174 (287)
T ss_dssp             EEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECCCT
T ss_pred             EEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCCCC
Confidence            999999999998888655 5789999999999999999999998   8  999999999999988776     9999999


Q ss_pred             CCccccCCCCCccccccccCCccccccc--ccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcc
Q 003836          648 LAKLLTLDQSHTNTAIRGTKGYVAPEWF--RNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQE  725 (792)
Q Consensus       648 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~  725 (792)
                      +++....    ......||+.|+|||.+  ....++.++||||||+++|||++|+.||..........            
T Consensus       175 ~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~------------  238 (287)
T 4f0f_A          175 LSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF------------  238 (287)
T ss_dssp             TCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHH------------
T ss_pred             ccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHH------------
Confidence            9975432    23345689999999998  44568899999999999999999999996543221100            


Q ss_pred             cchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          726 RTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       726 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                        .............+...+..+.+++.+||+.||++|||++|+++.|+++
T Consensus       239 --~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          239 --INMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             --HHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             --HHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence              0111111222223334567889999999999999999999999999864

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=2.2e-39  Score=344.98  Aligned_cols=258  Identities=23%  Similarity=0.321  Sum_probs=195.5

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcc--cCCCCcccccceecc----CCceEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQ--THHKNLVRLLGYCDE----GQNRLL  576 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~--l~h~niv~l~g~~~~----~~~~~l  576 (792)
                      +.+.+.||+|+||+||+|..   +++.||||++...   ....+.+|.+++..  ++||||+++++++.+    ....++
T Consensus        10 y~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l   83 (301)
T 3q4u_A           10 ITLLECVGKGRYGEVWRGSW---QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL   83 (301)
T ss_dssp             CEEEEEEEECSSEEEEEEEE---TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred             EEEEEeeccCCCcEEEEEEE---CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence            34567899999999999976   3678999998643   34556666666655  799999999998644    346889


Q ss_pred             EEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHh--------hccCCCeEecCCCCCcEEEcCCCCeEEeecCC
Q 003836          577 VYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLH--------EECCTQIIHCDIKPQNILLDDHYNARISDFGL  648 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~  648 (792)
                      ||||+++|+|.+++.. ..+++..+.+++.||+.||+|||        +.   +|+||||||+|||++.++.+||+|||+
T Consensus        84 v~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~  159 (301)
T 3q4u_A           84 ITHYHEMGSLYDYLQL-TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIADLGL  159 (301)
T ss_dssp             EECCCTTCBHHHHHTT-CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred             ehhhccCCCHHHHHhh-cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEeeCCC
Confidence            9999999999999954 56899999999999999999999        66   999999999999999999999999999


Q ss_pred             CccccCCCCCc---cccccccCCcccccccccC------CCCcccceehHHHHHHHHHhc----------CcCCCcchhh
Q 003836          649 AKLLTLDQSHT---NTAIRGTKGYVAPEWFRNM------PITVKVDVYSYGVLLLEIICL----------RRNIDNEISK  709 (792)
Q Consensus       649 a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~k~DV~S~Gv~l~el~tg----------~~p~~~~~~~  709 (792)
                      ++.........   .....||+.|+|||.+.+.      .++.++||||||+++|||++|          +.||......
T Consensus       160 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~  239 (301)
T 3q4u_A          160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN  239 (301)
T ss_dssp             CEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred             eeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCC
Confidence            98765433321   2234699999999999876      556799999999999999999          7777543221


Q ss_pred             hhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          710 VDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       710 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                      .....  .............    .......+...+..+.+++.+||+.||++|||++||++.|+++
T Consensus       240 ~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          240 DPSFE--DMRKVVCVDQQRP----NIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             SCCHH--HHHHHHTTSCCCC----CCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             Ccchh--hhhHHHhccCCCC----CCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            11000  0000000000000    0000112235678899999999999999999999999999864

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=2.1e-39  Score=341.33  Aligned_cols=251  Identities=30%  Similarity=0.452  Sum_probs=205.2

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.+.||+|+||.||+|...  +++.||+|++.... ...+.+.+|++++++++||||+++++++.+ +..++||||++
T Consensus        15 y~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~   90 (279)
T 1qpc_A           15 LKLVERLGAGQFGEVWMGYYN--GHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYME   90 (279)
T ss_dssp             EEEEEEEEEETTEEEEEEEET--TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCT
T ss_pred             hhheeeecCCCCeEEEEEEEc--CCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecCC
Confidence            345678999999999999764  35689999987543 346789999999999999999999999874 46899999999


Q ss_pred             CCCccccccCCC--CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          583 NGTVASFLFGDS--KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       583 ~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +++|.+++....  .+++..+..++.||+.||+|||+.   +|+||||||+|||+++++.+||+|||+++..........
T Consensus        91 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  167 (279)
T 1qpc_A           91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR  167 (279)
T ss_dssp             TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECC
T ss_pred             CCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccc
Confidence            999999997653  689999999999999999999998   999999999999999999999999999987754433333


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      ....+++.|+|||.+.+..++.++||||||+++|||++ |+.||........   .              ..+.......
T Consensus       168 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~---~--------------~~~~~~~~~~  230 (279)
T 1qpc_A          168 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV---I--------------QNLERGYRMV  230 (279)
T ss_dssp             TTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH---H--------------HHHHTTCCCC
T ss_pred             cCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHH---H--------------HHHhcccCCC
Confidence            34457889999999998889999999999999999999 8889865432110   0              0001111112


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      .+...+..+.+++.+||+.+|++|||++++++.|+.+.
T Consensus       231 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  268 (279)
T 1qpc_A          231 RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF  268 (279)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence            22334567889999999999999999999999998864

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=6.6e-39  Score=346.09  Aligned_cols=246  Identities=20%  Similarity=0.313  Sum_probs=192.8

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCC---------
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQ---------  572 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~---------  572 (792)
                      +.+.+.||+|+||.||+|... .+++.||||++.... ....+.+.+|++++++++||||+++++++.+..         
T Consensus         8 y~~~~~lG~G~~g~V~~a~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~   86 (332)
T 3qd2_B            8 FEPIQCMGRGGFGVVFEAKNK-VDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMD   86 (332)
T ss_dssp             EEEEEEEECC-CSEEEEEEET-TTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHH
T ss_pred             CceeeEecCCCCeEEEEEEEc-CCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhh
Confidence            345578999999999999764 456799999987543 334578999999999999999999999985543         


Q ss_pred             ------------------------------------------------ceEEEEEeccCCCccccccCCCC---CchhHH
Q 003836          573 ------------------------------------------------NRLLVYEFMSNGTVASFLFGDSK---PNWKLR  601 (792)
Q Consensus       573 ------------------------------------------------~~~lV~E~~~~gsL~~~l~~~~~---l~~~~~  601 (792)
                                                                      ..++||||+++++|.+++.....   ..+..+
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~  166 (332)
T 3qd2_B           87 EIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVC  166 (332)
T ss_dssp             C--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHH
T ss_pred             hhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHH
Confidence                                                            27899999999999999987643   355568


Q ss_pred             HHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC-----------CccccccccCCcc
Q 003836          602 TEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS-----------HTNTAIRGTKGYV  670 (792)
Q Consensus       602 ~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~-----------~~~~~~~gt~~y~  670 (792)
                      ..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++.......           .......||+.|+
T Consensus       167 ~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~  243 (332)
T 3qd2_B          167 LHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYM  243 (332)
T ss_dssp             HHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGS
T ss_pred             HHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCcc
Confidence            99999999999999998   999999999999999999999999999987754422           1223356999999


Q ss_pred             cccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHH
Q 003836          671 APEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVM  750 (792)
Q Consensus       671 aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  750 (792)
                      |||.+.+..++.++||||||+++|||++|..|+......     .     .......         ...........+.+
T Consensus       244 aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~-----~-----~~~~~~~---------~~~~~~~~~~~~~~  304 (332)
T 3qd2_B          244 SPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRI-----I-----TDVRNLK---------FPLLFTQKYPQEHM  304 (332)
T ss_dssp             CHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHH-----H-----HHHHTTC---------CCHHHHHHCHHHHH
T ss_pred             ChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHH-----H-----HHhhccC---------CCcccccCChhHHH
Confidence            999999999999999999999999999987654211100     0     0000000         01111234466789


Q ss_pred             HHHHccccCCCCCCCHHhHHH
Q 003836          751 VAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       751 l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ++.+||+.||++|||++|+++
T Consensus       305 li~~~l~~~p~~Rps~~~~l~  325 (332)
T 3qd2_B          305 MVQDMLSPSPTERPEATDIIE  325 (332)
T ss_dssp             HHHHHHCSSGGGSCCHHHHHH
T ss_pred             HHHHHccCCCCcCCCHHHHhh
Confidence            999999999999999999998

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=9.6e-39  Score=351.45  Aligned_cols=250  Identities=24%  Similarity=0.307  Sum_probs=204.4

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.+.||+|+||.||+|... .+++.+|+|++..........+.+|++++++++||||+++++++.+....++||||++
T Consensus        53 y~i~~~LG~G~~g~Vy~~~~~-~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~  131 (387)
T 1kob_A           53 YDILEELGSGAFGVVHRCVEK-ATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLS  131 (387)
T ss_dssp             EEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCC
T ss_pred             eEEEEEEecCCCEEEEEEEEC-CCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCC
Confidence            445678999999999999754 4567999999987655566789999999999999999999999999999999999999


Q ss_pred             CCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC--CCCeEEeecCCCccccCCCCCc
Q 003836          583 NGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD--HYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       583 ~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~--~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      +|+|.+++... ..+++..+..++.||+.||+|||+.   +|+||||||+|||++.  ++.+||+|||+++......  .
T Consensus       132 gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~--~  206 (387)
T 1kob_A          132 GGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE--I  206 (387)
T ss_dssp             CCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS--C
T ss_pred             CCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCCCc--c
Confidence            99999999765 4789999999999999999999998   9999999999999974  5779999999998765432  2


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||........   +.......           ......
T Consensus       207 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~---~~~i~~~~-----------~~~~~~  272 (387)
T 1kob_A          207 VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLET---LQNVKRCD-----------WEFDED  272 (387)
T ss_dssp             EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH---HHHHHHCC-----------CCCCSS
T ss_pred             eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHH---HHHHHhCC-----------CCCCcc
Confidence            2344689999999999999999999999999999999999999976432111   10000000           000111


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .....+.++.+++.+||+.||++|||++|+++.
T Consensus       273 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h  305 (387)
T 1kob_A          273 AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH  305 (387)
T ss_dssp             TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             ccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence            112345678899999999999999999999974

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=7e-39  Score=348.29  Aligned_cols=272  Identities=16%  Similarity=0.193  Sum_probs=202.1

Q ss_pred             hhhhhhcCccccceEEEeeecC--CCceEEEEEEccccccc-----------chHHHHHHHHHhcccCCCCcccccceec
Q 003836          503 RGFKEELGRGAFGTVYKGFVNM--GSSNHVAVKKLNSVFQD-----------SEKEFKAEVNGIGQTHHKNLVRLLGYCD  569 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~--~~~~~vavK~~~~~~~~-----------~~~~~~~Ei~~l~~l~h~niv~l~g~~~  569 (792)
                      +.+.+.||+|+||.||+|....  ..+..+|+|+.......           ....+.+|+..+..++||||+++++++.
T Consensus        39 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~  118 (345)
T 2v62_A           39 WVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGL  118 (345)
T ss_dssp             EEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEE
T ss_pred             EEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccc
Confidence            4456789999999999997653  14578999998754321           1234667888999999999999999997


Q ss_pred             c----CCceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCC--CeEE
Q 003836          570 E----GQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY--NARI  643 (792)
Q Consensus       570 ~----~~~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~--~~kl  643 (792)
                      .    ....++||||+ +++|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++  .+||
T Consensus       119 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kL  194 (345)
T 2v62_A          119 TEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQVYL  194 (345)
T ss_dssp             EESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTTSEEE
T ss_pred             cccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCCcEEE
Confidence            7    77899999999 999999998877899999999999999999999998   999999999999999887  9999


Q ss_pred             eecCCCccccCCCCC------ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHH
Q 003836          644 SDFGLAKLLTLDQSH------TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTD  717 (792)
Q Consensus       644 ~Dfg~a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~  717 (792)
                      +|||+++........      ......||+.|+|||.+.+..++.++|||||||++|||++|+.||............  
T Consensus       195 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~--  272 (345)
T 2v62_A          195 ADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQT--  272 (345)
T ss_dssp             CCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHH--
T ss_pred             EeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHH--
Confidence            999999876433221      123457999999999999999999999999999999999999999653222111100  


Q ss_pred             HHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCCCCCCCCC
Q 003836          718 WAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPIPPCPW  786 (792)
Q Consensus       718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~~~p~~P~  786 (792)
                       ....... .+...+....   .....+.++.+++.+||+.||++||++++|++.|+.+.. +.++..+
T Consensus       273 -~~~~~~~-~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~-~~~~~d~  335 (345)
T 2v62_A          273 -AKTNLLD-ELPQSVLKWA---PSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI-PLGPLDF  335 (345)
T ss_dssp             -HHHHHHH-TTTHHHHHHS---CTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC-CCCCCCC
T ss_pred             -HHHhhcc-cccHHHHhhc---cccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC-cccCCCc
Confidence             0000000 0111111000   011344678899999999999999999999999988643 4444433

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=2.5e-39  Score=348.82  Aligned_cols=253  Identities=25%  Similarity=0.351  Sum_probs=200.2

Q ss_pred             hhhhhcCccccceEEEeeecCCCc---eEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSS---NHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~---~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      .+.+.||+|+||+||+|.......   ..||+|.+.... ....+.+.+|+.++++++||||+++++++. ++..++|||
T Consensus        16 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e   94 (325)
T 3kex_A           16 RKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQ   94 (325)
T ss_dssp             EEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEE
T ss_pred             eeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEE
Confidence            345789999999999997643221   248888875432 333467889999999999999999999986 466899999


Q ss_pred             eccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          580 FMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       580 ~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      |+++|+|.+++... ..+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++........
T Consensus        95 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~  171 (325)
T 3kex_A           95 YLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ  171 (325)
T ss_dssp             CCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTC
T ss_pred             eCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccCccccc
Confidence            99999999999775 5789999999999999999999999   9999999999999999999999999999987544332


Q ss_pred             -ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          659 -TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       659 -~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                       ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||........                 ...+....
T Consensus       172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-----------------~~~~~~~~  234 (325)
T 3kex_A          172 LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV-----------------PDLLEKGE  234 (325)
T ss_dssp             CC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHH-----------------HHHHHTTC
T ss_pred             ccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHH-----------------HHHHHcCC
Confidence             2334567889999999999999999999999999999999 9999975432111                 11111111


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      ....+...+..+.+++.+||+.||.+||+++|+++.|+.+.
T Consensus       235 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~  275 (325)
T 3kex_A          235 RLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMA  275 (325)
T ss_dssp             BCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred             CCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            11122223456788999999999999999999999998764

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=3.3e-39  Score=353.50  Aligned_cols=264  Identities=16%  Similarity=0.188  Sum_probs=202.5

Q ss_pred             hhhhhhcCccccceEEEeeecCC----CceEEEEEEcccccccc-----------hHHHHHHHHHhcccCCCCcccccce
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMG----SSNHVAVKKLNSVFQDS-----------EKEFKAEVNGIGQTHHKNLVRLLGY  567 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~----~~~~vavK~~~~~~~~~-----------~~~~~~Ei~~l~~l~h~niv~l~g~  567 (792)
                      +.+.+.||+|+||.||+|....+    .++.||||++.......           ...+..|+..+.+++|+||++++++
T Consensus        37 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~  116 (364)
T 3op5_A           37 WKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGS  116 (364)
T ss_dssp             EEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEE
T ss_pred             EEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEee
Confidence            44567899999999999977543    24789999986543211           1233455667778899999999999


Q ss_pred             eccC----CceEEEEEeccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEc--CCCC
Q 003836          568 CDEG----QNRLLVYEFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLD--DHYN  640 (792)
Q Consensus       568 ~~~~----~~~~lV~E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~--~~~~  640 (792)
                      +.+.    ...+|||||+ +++|.+++... ..+++..+..|+.||+.||+|||+.   +|+||||||+|||++  .++.
T Consensus       117 ~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~~~~~  192 (364)
T 3op5_A          117 GLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNPDQ  192 (364)
T ss_dssp             EEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESSCTTC
T ss_pred             eeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecCCCCe
Confidence            8764    4589999999 99999999765 6789999999999999999999999   999999999999999  8899


Q ss_pred             eEEeecCCCccccCCCCCc------cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhh
Q 003836          641 ARISDFGLAKLLTLDQSHT------NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAI  714 (792)
Q Consensus       641 ~kl~Dfg~a~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~  714 (792)
                      +||+|||+++.+.......      .....||+.|+|||.+.+..++.++|||||||++|||++|+.||...........
T Consensus       193 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~  272 (364)
T 3op5_A          193 VYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVR  272 (364)
T ss_dssp             EEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHH
T ss_pred             EEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHH
Confidence            9999999998765432211      1334599999999999999999999999999999999999999975433211111


Q ss_pred             HHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          715 LTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      .   ..... ...+..+++..+..   ...+.++.+++..||+.+|.+||++++|++.|+.++
T Consensus       273 ~---~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~  328 (364)
T 3op5_A          273 D---SKIRY-RENIASLMDKCFPA---ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGL  328 (364)
T ss_dssp             H---HHHHH-HHCHHHHHHHHSCT---TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred             H---HHHHh-hhhHHHHHHHhccc---ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Confidence            0   11111 11233333333221   123467889999999999999999999999987754

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.8e-39  Score=345.66  Aligned_cols=247  Identities=19%  Similarity=0.246  Sum_probs=202.8

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.+.||+|+||+||++... .+++.+|+|.+... ......+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus         7 y~~~~~lG~G~~g~Vy~~~~~-~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~   84 (321)
T 1tki_A            7 YMIAEDLGRGEFGIVHRCVET-SSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFIS   84 (321)
T ss_dssp             EEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred             eEeeeEEecCCCeEEEEEEEC-CCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCC
Confidence            345678999999999999754 56789999998754 3445678999999999999999999999999999999999999


Q ss_pred             CCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC--CCCeEEeecCCCccccCCCCCc
Q 003836          583 NGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD--HYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       583 ~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~--~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      +|+|.+++... ..+++..+..++.||+.||.|||+.   +|+||||||+|||++.  ++.+||+|||+++......  .
T Consensus        85 g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~--~  159 (321)
T 1tki_A           85 GLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD--N  159 (321)
T ss_dssp             CCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC--E
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC--c
Confidence            99999999765 4789999999999999999999998   9999999999999997  7899999999998765322  2


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      .....||+.|+|||.+.+..++.++||||||+++|||++|+.||........   +.             .+........
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~---~~-------------~i~~~~~~~~  223 (321)
T 1tki_A          160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQI---IE-------------NIMNAEYTFD  223 (321)
T ss_dssp             EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH---HH-------------HHHHTCCCCC
T ss_pred             cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHH---HH-------------HHHcCCCCCC
Confidence            3345689999999999988899999999999999999999999976432211   10             0111100000


Q ss_pred             --CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          740 --NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       740 --~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                        .....+.++.+++.+||+.||++|||+.|+++.
T Consensus       224 ~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h  258 (321)
T 1tki_A          224 EEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             HHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             hhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence              001235678899999999999999999999974

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=4.2e-39  Score=337.11  Aligned_cols=246  Identities=21%  Similarity=0.332  Sum_probs=201.4

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccC--CceEEEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEG--QNRLLVYE  579 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~--~~~~lV~E  579 (792)
                      .+.+.||+|+||+||+|...   ++.+|||++....  ....+.+.+|+.++++++||||+++++++.+.  ...++|||
T Consensus        13 ~~~~~lg~G~~g~V~~~~~~---~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e   89 (271)
T 3kmu_A           13 NFLTKLNENHSGELWKGRWQ---GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITH   89 (271)
T ss_dssp             EEEEEEEEETTEEEEEEEET---TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEE
T ss_pred             HHHHHhcCCCcceEEEEEEC---CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeec
Confidence            45578999999999999864   5789999987543  33456799999999999999999999999877  78899999


Q ss_pred             eccCCCccccccCCC--CCchhHHHHHHHHHHHHHHHHhhccCCC--eEecCCCCCcEEEcCCCCeEEeecCCCccccCC
Q 003836          580 FMSNGTVASFLFGDS--KPNWKLRTEIAMGIAGGLFYLHEECCTQ--IIHCDIKPQNILLDDHYNARISDFGLAKLLTLD  655 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~  655 (792)
                      |+++|+|.+++....  .+++..+..++.||+.||+|||+.   +  |+||||||+|||++.++.++|+|||++..... 
T Consensus        90 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~-  165 (271)
T 3kmu_A           90 WMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS-  165 (271)
T ss_dssp             CCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC-
T ss_pred             ccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeeecc-
Confidence            999999999998764  489999999999999999999998   7  99999999999999999999999998764322 


Q ss_pred             CCCccccccccCCcccccccccCCCCc---ccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhh
Q 003836          656 QSHTNTAIRGTKGYVAPEWFRNMPITV---KVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALV  732 (792)
Q Consensus       656 ~~~~~~~~~gt~~y~aPE~~~~~~~~~---k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  732 (792)
                           ....||+.|+|||.+.+...+.   ++||||||+++|||++|+.||........                .....
T Consensus       166 -----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~----------------~~~~~  224 (271)
T 3kmu_A          166 -----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI----------------GMKVA  224 (271)
T ss_dssp             -----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH----------------HHHHH
T ss_pred             -----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH----------------HHHHH
Confidence                 2345799999999998755444   89999999999999999999975432211                01111


Q ss_pred             hchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          733 ENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       733 ~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      ........+...+..+.+++..||+.||++|||++|+++.|+.+.
T Consensus       225 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~  269 (271)
T 3kmu_A          225 LEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ  269 (271)
T ss_dssp             HSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             hcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence            112222233345667899999999999999999999999998764

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=5.2e-39  Score=344.01  Aligned_cols=261  Identities=20%  Similarity=0.257  Sum_probs=196.1

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccc--cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ--DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .+.++||+|+||+||++...  +++.||+|++.....  ...+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus        24 ~~~~~lG~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~  101 (311)
T 3niz_A           24 QKLEKVGEGTYGVVYKAKDS--QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFM  101 (311)
T ss_dssp             EEEEEEEECSSCEEEEEEET--TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECC
T ss_pred             HhhhhccCCCCeEEEEEEEC--CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCC
Confidence            34578999999999999764  367899999875422  23467899999999999999999999999999999999999


Q ss_pred             cCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          582 SNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       582 ~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      ++ +|.+++... ..+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++...... ...
T Consensus       102 ~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-~~~  176 (311)
T 3niz_A          102 EK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPV-RSY  176 (311)
T ss_dssp             SE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC-C--
T ss_pred             CC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCCc-ccc
Confidence            85 777777654 4689999999999999999999998   99999999999999999999999999998764322 222


Q ss_pred             ccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHh----hcc-cchhHhhhc
Q 003836          661 TAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDR----YQE-RTLEALVEN  734 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~  734 (792)
                      ....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||...........+.......    +.. ..+......
T Consensus       177 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  256 (311)
T 3niz_A          177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQR  256 (311)
T ss_dssp             -CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSC
T ss_pred             cCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhc
Confidence            33468999999999876 568999999999999999999999997654332211111100000    000 000000000


Q ss_pred             hh-------cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          735 DL-------EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       735 ~~-------~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ..       ..........++.+++.+||+.||++|||++|+++
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          257 TFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             CCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             ccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            00       00011123467889999999999999999999997

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=2.2e-39  Score=348.90  Aligned_cols=256  Identities=21%  Similarity=0.339  Sum_probs=193.3

Q ss_pred             hhhhhhcCccccceEEEeeecCCCc--eEEEEEEcccc--cccchHHHHHHHHHhcccCCCCcccccceeccCCce----
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSS--NHVAVKKLNSV--FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNR----  574 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~--~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~----  574 (792)
                      +.+.+.||+|+||+||+|......+  ..||||++...  .....+.+.+|++++++++||||+++++++......    
T Consensus        25 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  104 (323)
T 3qup_A           25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLP  104 (323)
T ss_dssp             CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------
T ss_pred             eEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCC
Confidence            4456789999999999997653322  37999998754  344567899999999999999999999999877655    


Q ss_pred             --EEEEEeccCCCccccccCCC------CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeec
Q 003836          575 --LLVYEFMSNGTVASFLFGDS------KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDF  646 (792)
Q Consensus       575 --~lV~E~~~~gsL~~~l~~~~------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Df  646 (792)
                        ++||||+++|+|.+++....      .+++..+..++.||+.||+|||+.   +|+||||||+|||+++++.+||+||
T Consensus       105 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl~Df  181 (323)
T 3qup_A          105 IPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADF  181 (323)
T ss_dssp             CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCC
T ss_pred             ccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEEeec
Confidence              99999999999999985432      588999999999999999999999   9999999999999999999999999


Q ss_pred             CCCccccCCCCC-ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhc
Q 003836          647 GLAKLLTLDQSH-TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQ  724 (792)
Q Consensus       647 g~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~  724 (792)
                      |+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||.........            
T Consensus       182 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~------------  249 (323)
T 3qup_A          182 GLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIY------------  249 (323)
T ss_dssp             CC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH------------
T ss_pred             cccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHH------------
Confidence            999876443322 2223456789999999999999999999999999999999 88888654322110            


Q ss_pred             ccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          725 ERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       725 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                           ..+........+...+..+.+++.+||+.||++|||+.++++.|++++.
T Consensus       250 -----~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~  298 (323)
T 3qup_A          250 -----NYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILG  298 (323)
T ss_dssp             -----HHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -----HHHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence                 0011111112233455678999999999999999999999999988764

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=2.6e-39  Score=350.50  Aligned_cols=245  Identities=23%  Similarity=0.325  Sum_probs=202.2

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      .+.+.||+|+||.||++... .+++.||+|++++..   ....+.+.+|..++.++ +||||+++++++.+.+..++|||
T Consensus        20 ~~~~~lG~G~fg~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E   98 (345)
T 1xjd_A           20 ILHKMLGKGSFGKVFLAEFK-KTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVME   98 (345)
T ss_dssp             EEEEEEEECSSSEEEEEEET-TTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred             EEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEe
Confidence            34578999999999999764 467899999997532   33456788899999887 89999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      |+++|+|.+++.....+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus        99 ~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~-~~  174 (345)
T 1xjd_A           99 YLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD-AK  174 (345)
T ss_dssp             CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT-CC
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhcccCC-Cc
Confidence            999999999998777899999999999999999999999   99999999999999999999999999998643222 22


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||........   ..             .+....  ..
T Consensus       175 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~---~~-------------~i~~~~--~~  236 (345)
T 1xjd_A          175 TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL---FH-------------SIRMDN--PF  236 (345)
T ss_dssp             BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HH-------------HHHHCC--CC
T ss_pred             ccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHH---HH-------------HHHhCC--CC
Confidence            3456799999999999999999999999999999999999999975432211   00             001110  11


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHH-hHHH
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTMR-KVTQ  771 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~-evl~  771 (792)
                      .+...+.++.+++.+||+.||++||++. +|++
T Consensus       237 ~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~  269 (345)
T 1xjd_A          237 YPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  269 (345)
T ss_dssp             CCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             CCcccCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence            2223456788999999999999999998 7764

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=1.4e-39  Score=360.04  Aligned_cols=247  Identities=19%  Similarity=0.243  Sum_probs=201.2

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +.++||+|+||+||++... .+++.||+|++.+..   ....+.+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus        73 ~~~~LG~G~fG~V~~~~~~-~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~  151 (410)
T 3v8s_A           73 VVKVIGRGAFGEVQLVRHK-STRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYM  151 (410)
T ss_dssp             EEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             EEEEEEcCCCEEEEEEEEC-CCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCC
Confidence            3468999999999999764 456799999986521   223456889999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      ++|+|.+++.. ..+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++...........
T Consensus       152 ~gg~L~~~l~~-~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~  227 (410)
T 3v8s_A          152 PGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCD  227 (410)
T ss_dssp             TTEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEECC
T ss_pred             CCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeEeeccCCccccc
Confidence            99999999865 4688999999999999999999998   9999999999999999999999999999876544433344


Q ss_pred             cccccCCcccccccccCC----CCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch--
Q 003836          662 AIRGTKGYVAPEWFRNMP----ITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND--  735 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~----~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  735 (792)
                      ...||+.|+|||++.+..    ++.++|||||||++|||++|+.||..........                .++...  
T Consensus       228 ~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~----------------~i~~~~~~  291 (410)
T 3v8s_A          228 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS----------------KIMNHKNS  291 (410)
T ss_dssp             SCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH----------------HHHTHHHH
T ss_pred             CCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHH----------------HHHhcccc
Confidence            567999999999997655    8899999999999999999999997543221111                111110  


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCC--CCCHHhHHHH
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSH--RPTMRKVTQM  772 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~--RPs~~evl~~  772 (792)
                      +........+.++.+++.+||+.+|.+  ||+++||++.
T Consensus       292 ~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H  330 (410)
T 3v8s_A          292 LTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH  330 (410)
T ss_dssp             CCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred             ccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence            011111134567889999999999988  9999999975

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=8.1e-39  Score=349.64  Aligned_cols=252  Identities=22%  Similarity=0.295  Sum_probs=203.6

Q ss_pred             HHhhhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEE
Q 003836          501 VTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       501 ~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~  578 (792)
                      ..+.+.+.||+|+||.||++... .+++.||+|++....  ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus        29 ~~y~~~~~lG~G~~g~V~~~~~~-~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  107 (362)
T 2bdw_A           29 DNYDVKEELGKGAFSVVRRCVHK-TTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF  107 (362)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEeeEEecCCCeEEEEEEEC-CCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            34556688999999999999754 456799999987542  234467899999999999999999999999999999999


Q ss_pred             EeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCC---CeEEeecCCCccccCC
Q 003836          579 EFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY---NARISDFGLAKLLTLD  655 (792)
Q Consensus       579 E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~---~~kl~Dfg~a~~~~~~  655 (792)
                      ||+++|+|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++   .+||+|||+++.....
T Consensus       108 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~  184 (362)
T 2bdw_A          108 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS  184 (362)
T ss_dssp             CCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceEecCC
Confidence            9999999999998888899999999999999999999999   999999999999998654   5999999999876532


Q ss_pred             CCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          656 QSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       656 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                      .  ......||+.|+|||++.+..++.++|||||||++|||++|+.||........   ....     .....      .
T Consensus       185 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~---~~~i-----~~~~~------~  248 (362)
T 2bdw_A          185 E--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL---YAQI-----KAGAY------D  248 (362)
T ss_dssp             C--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHH-----HHTCC------C
T ss_pred             c--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH---HHHH-----HhCCC------C
Confidence            2  22345799999999999999999999999999999999999999975432111   0000     00000      0


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .........+.++.+++.+||+.||++||++.|+++.
T Consensus       249 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  285 (362)
T 2bdw_A          249 YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  285 (362)
T ss_dssp             CCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             CCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            0000011234678899999999999999999999864

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=6.7e-39  Score=351.48  Aligned_cols=254  Identities=24%  Similarity=0.397  Sum_probs=192.9

Q ss_pred             hhhhcCccccceEEEeeecCC--CceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceecc-CCceEEEEEe
Q 003836          505 FKEELGRGAFGTVYKGFVNMG--SSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDE-GQNRLLVYEF  580 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~--~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~-~~~~~lV~E~  580 (792)
                      +.+.||+|+||+||+|.....  ....+|||.+.... ....+.+.+|+.++++++||||+++++++.+ .+..++||||
T Consensus        93 ~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~  172 (373)
T 3c1x_A           93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY  172 (373)
T ss_dssp             EEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEEC
T ss_pred             cCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEEC
Confidence            457899999999999987433  23578999987543 3445789999999999999999999998754 5578999999


Q ss_pred             ccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC-
Q 003836          581 MSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH-  658 (792)
Q Consensus       581 ~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~-  658 (792)
                      +++|+|.+++... ..+++..+..++.||++||+|||++   +|+||||||+|||+++++.+||+|||+++........ 
T Consensus       173 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~  249 (373)
T 3c1x_A          173 MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS  249 (373)
T ss_dssp             CTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------------
T ss_pred             CCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccccccccc
Confidence            9999999999765 4688999999999999999999999   9999999999999999999999999999876433221 


Q ss_pred             --ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          659 --TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       659 --~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                        ......+++.|+|||.+.+..++.++||||||+++|||++ |..||.........                 ..+...
T Consensus       250 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~-----------------~~~~~~  312 (373)
T 3c1x_A          250 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-----------------VYLLQG  312 (373)
T ss_dssp             --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHH-----------------HHHHTT
T ss_pred             ccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHH-----------------HHHHcC
Confidence              1233457889999999999999999999999999999999 55566433211100                 000011


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                      .....+...+..+.+++.+||+.+|++|||++|+++.|+.+..
T Consensus       313 ~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~  355 (373)
T 3c1x_A          313 RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS  355 (373)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            1111222345678899999999999999999999999988653

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=1.1e-39  Score=350.41  Aligned_cols=270  Identities=24%  Similarity=0.343  Sum_probs=210.7

Q ss_pred             hhhhhcCccccceEEEeee---cCCCceEEEEEEcccccc-cchHHHHHHHHHhcccCCCCcccccceecc--CCceEEE
Q 003836          504 GFKEELGRGAFGTVYKGFV---NMGSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLLGYCDE--GQNRLLV  577 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~---~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~--~~~~~lV  577 (792)
                      .+.+.||+|+||+||++.+   +..+++.||||++..... ...+.+.+|++++++++||||+++++++.+  ....++|
T Consensus        34 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv  113 (318)
T 3lxp_A           34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLV  113 (318)
T ss_dssp             EEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEE
T ss_pred             hhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEE
Confidence            4557899999999988754   234578899999976432 345679999999999999999999999976  4578999


Q ss_pred             EEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC
Q 003836          578 YEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      |||+++|+|.+++... .+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++.......
T Consensus       114 ~e~~~~~~L~~~l~~~-~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~  189 (318)
T 3lxp_A          114 MEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE  189 (318)
T ss_dssp             ECCCTTCBHHHHGGGS-CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCS
T ss_pred             EecccCCcHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccccccccc
Confidence            9999999999999764 488999999999999999999999   999999999999999999999999999987654332


Q ss_pred             C--ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          658 H--TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       658 ~--~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                      .  ......+++.|+|||.+.+..++.++||||||+++|||++|+.||..........  ..+.........+...+...
T Consensus       190 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~  267 (318)
T 3lxp_A          190 YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLEL--IGIAQGQMTVLRLTELLERG  267 (318)
T ss_dssp             EEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHH--HCSCCHHHHHHHHHHHHHTT
T ss_pred             ccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhh--hcccccchhHHHHHHHHhcc
Confidence            1  2233457888999999999899999999999999999999999986543211100  00000001111223333333


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCC
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEV  779 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~  779 (792)
                      .....+...+..+.+++.+||+.||++|||++|+++.|+.+.+.
T Consensus       268 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~  311 (318)
T 3lxp_A          268 ERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEK  311 (318)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             cCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHh
Confidence            34444555667899999999999999999999999999887543

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=8.5e-39  Score=345.41  Aligned_cols=255  Identities=16%  Similarity=0.185  Sum_probs=202.8

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEEEecc
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      .+.+.||+|+||+||+|.. ..+++.||||++....  ..+.+.+|+++++++ +|+||+++++++.+.+..++||||+ 
T Consensus        12 ~~~~~lg~G~~g~V~~~~~-~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-   87 (330)
T 2izr_A           12 RVGKKIGCGNFGELRLGKN-LYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-   87 (330)
T ss_dssp             EEEEECCC-CTTSEEEEEE-TTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-
T ss_pred             EEEEEeeccCCceEEEEEE-CCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-
Confidence            3457899999999999974 3567899999987542  234688999999999 9999999999999999999999999 


Q ss_pred             CCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCC-----eEEeecCCCccccCCC
Q 003836          583 NGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYN-----ARISDFGLAKLLTLDQ  656 (792)
Q Consensus       583 ~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~-----~kl~Dfg~a~~~~~~~  656 (792)
                      +++|.+++... ..+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.     +||+|||+++......
T Consensus        88 ~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~  164 (330)
T 2izr_A           88 GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPE  164 (330)
T ss_dssp             CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTT
T ss_pred             CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCC
Confidence            99999999763 6789999999999999999999999   9999999999999998887     9999999999765433


Q ss_pred             CC------ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhH
Q 003836          657 SH------TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEA  730 (792)
Q Consensus       657 ~~------~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  730 (792)
                      ..      ......||+.|+|||.+.+..++.++||||||+++|||++|+.||..................... .....
T Consensus       165 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~-~~~~~  243 (330)
T 2izr_A          165 TKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRA-TPIEV  243 (330)
T ss_dssp             TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHH-SCHHH
T ss_pred             CCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhcc-CCHHH
Confidence            22      123567999999999999999999999999999999999999999764322111111111000000 00000


Q ss_pred             hhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          731 LVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       731 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                           .    ....+ ++.+++..||+.+|.+||++++|++.|+.+
T Consensus       244 -----~----~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~  279 (330)
T 2izr_A          244 -----L----CENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDL  279 (330)
T ss_dssp             -----H----TTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             -----H----hccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence                 0    00122 788999999999999999999999998654

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=3.8e-39  Score=347.89  Aligned_cols=245  Identities=23%  Similarity=0.336  Sum_probs=201.3

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +.+.+.||+|+||.||+|... .+++.||+|++....   ......+.+|+.++++++||||+++++++.+.+..++|||
T Consensus        11 Y~i~~~lG~G~~g~V~~a~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E   89 (336)
T 3h4j_B           11 YIIRETLGEGSFGKVKLATHY-KTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIE   89 (336)
T ss_dssp             EEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             EEEEEEEecCCCeEEEEEEEC-CCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEE
Confidence            345678999999999999753 456799999986532   2334679999999999999999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      |+ +|+|.+++.....+++..+..++.||+.||.|||+.   +|+||||||+|||+++++.+||+|||+++......  .
T Consensus        90 ~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~--~  163 (336)
T 3h4j_B           90 YA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN--F  163 (336)
T ss_dssp             CC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB--T
T ss_pred             CC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCCc--c
Confidence            99 689999998878899999999999999999999999   99999999999999999999999999998764332  2


Q ss_pred             cccccccCCcccccccccCCC-CcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPI-TVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~-~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      .....||+.|+|||.+.+..+ +.++|||||||++|||++|+.||.........                ..+..  ...
T Consensus       164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~----------------~~i~~--~~~  225 (336)
T 3h4j_B          164 LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF----------------KKVNS--CVY  225 (336)
T ss_dssp             TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB----------------CCCCS--SCC
T ss_pred             cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH----------------HHHHc--CCC
Confidence            334569999999999988776 78999999999999999999999654221100                00000  001


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ..+...+..+.+++.+||+.||.+|||++|+++.
T Consensus       226 ~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  259 (336)
T 3h4j_B          226 VMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD  259 (336)
T ss_dssp             CCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred             CCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence            1122345678899999999999999999999874

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=1.3e-38  Score=349.40  Aligned_cols=245  Identities=22%  Similarity=0.276  Sum_probs=196.2

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCCCc
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTV  586 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~gsL  586 (792)
                      +.||+|+||.||+|... .+++.||+|++........+.+.+|++++++++||||+++++++.+.+..+|||||+++++|
T Consensus        95 ~~lG~G~~g~Vy~a~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L  173 (373)
T 2x4f_A           95 EILGGGRFGQVHKCEET-ATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL  173 (373)
T ss_dssp             EECC-----CEEEEEET-TTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred             eEEecCcCEEEEEEEEc-CCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence            56999999999999754 45679999999876556677899999999999999999999999999999999999999999


Q ss_pred             cccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEE--cCCCCeEEeecCCCccccCCCCCccccc
Q 003836          587 ASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILL--DDHYNARISDFGLAKLLTLDQSHTNTAI  663 (792)
Q Consensus       587 ~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl--~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  663 (792)
                      .+++... ..+++..+..++.||++||+|||+.   +|+||||||+|||+  ++++.+||+|||+++.......  ....
T Consensus       174 ~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--~~~~  248 (373)
T 2x4f_A          174 FDRIIDESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--LKVN  248 (373)
T ss_dssp             HHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--CCCC
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--cccc
Confidence            9988654 4689999999999999999999998   99999999999999  5678899999999987653322  2334


Q ss_pred             cccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHH
Q 003836          664 RGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVT  743 (792)
Q Consensus       664 ~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  743 (792)
                      .||+.|+|||.+.+..++.++|||||||++|||++|+.||........   +.......+.           ........
T Consensus       249 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~---~~~i~~~~~~-----------~~~~~~~~  314 (373)
T 2x4f_A          249 FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAET---LNNILACRWD-----------LEDEEFQD  314 (373)
T ss_dssp             CSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH---HHHHHHTCCC-----------SCSGGGTT
T ss_pred             cCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHhccCC-----------CChhhhcc
Confidence            689999999999989999999999999999999999999976432211   1111000000           00001112


Q ss_pred             HHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          744 MLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       744 ~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .+.++.+++.+||+.||.+|||++|+++
T Consensus       315 ~~~~~~~li~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          315 ISEEAKEFISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            3567889999999999999999999997

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=3.1e-39  Score=340.43  Aligned_cols=254  Identities=22%  Similarity=0.303  Sum_probs=201.5

Q ss_pred             hhhhhcCccccceEEEeeecCC--CceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          504 GFKEELGRGAFGTVYKGFVNMG--SSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~--~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      .+.+.||+|+||+||+|.....  .+..||+|++.... ....+.+.+|+.++++++||||+++++++.++ ..++||||
T Consensus        15 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~v~e~   93 (281)
T 3cc6_A           15 VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWIIMEL   93 (281)
T ss_dssp             EEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEEEEEC
T ss_pred             EEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEEEEec
Confidence            3457899999999999976432  34579999987643 34467899999999999999999999998754 56899999


Q ss_pred             ccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          581 MSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       581 ~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      +++++|.+++... ..+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++.........
T Consensus        94 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  170 (281)
T 3cc6_A           94 YPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYK  170 (281)
T ss_dssp             CTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC-------
T ss_pred             CCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCcccccccccc
Confidence            9999999999764 4589999999999999999999998   99999999999999999999999999998765544333


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||..........                 .+......
T Consensus       171 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~-----------------~~~~~~~~  233 (281)
T 3cc6_A          171 ASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIG-----------------VLEKGDRL  233 (281)
T ss_dssp             --CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHH-----------------HHHHTCCC
T ss_pred             cccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHH-----------------HHhcCCCC
Confidence            344557889999999998899999999999999999998 999996433221100                 00011111


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                      ..+...++.+.+++.+||+.+|++|||+.|+++.|+.+.+
T Consensus       234 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~  273 (281)
T 3cc6_A          234 PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ  273 (281)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence            1122345678899999999999999999999999987643

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=2.5e-39  Score=338.30  Aligned_cols=252  Identities=25%  Similarity=0.425  Sum_probs=206.5

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      .+.+.||+|+||.||++...  +++.||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus        11 ~~~~~lg~G~~g~V~~~~~~--~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   87 (267)
T 3t9t_A           11 TFVQEIGSGQFGLVHLGYWL--NKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEH   87 (267)
T ss_dssp             EEEEEEEEETTEEEEEEEET--TTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTT
T ss_pred             eeeeEecCCCceeEEEEEec--CCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCC
Confidence            34578999999999999764  35689999997643 3457899999999999999999999999999999999999999


Q ss_pred             CCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          584 GTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       584 gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      ++|.+++... ..+++..+..++.|++.||.|||+.   +|+|+||||+||+++.++.+||+|||+++............
T Consensus        88 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~  164 (267)
T 3t9t_A           88 GCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG  164 (267)
T ss_dssp             CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTS
T ss_pred             CcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccccccccc
Confidence            9999999765 5689999999999999999999999   99999999999999999999999999998764332222333


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCC
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN  741 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  741 (792)
                      ..+++.|+|||.+.+..++.++||||||+++|||++ |+.||........   .     ..         +........+
T Consensus       165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~---~-----~~---------i~~~~~~~~~  227 (267)
T 3t9t_A          165 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV---V-----ED---------ISTGFRLYKP  227 (267)
T ss_dssp             TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH---H-----HH---------HHTTCCCCCC
T ss_pred             ccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHH---H-----HH---------HhcCCcCCCC
Confidence            457788999999998899999999999999999999 8889865432110   0     00         0011111122


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          742 VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       742 ~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                      ...+..+.+++.+||+.+|++|||++|++++|+++.+
T Consensus       228 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (267)
T 3t9t_A          228 RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE  264 (267)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            2345678899999999999999999999999987643

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=1e-38  Score=346.90  Aligned_cols=243  Identities=23%  Similarity=0.217  Sum_probs=203.3

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      .+.+.||+|+||.||++... .+++.||+|++.+..   ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus        44 ~~~~~lG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  122 (350)
T 1rdq_E           44 DRIKTLGTGSFGRVMLVKHK-ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEY  122 (350)
T ss_dssp             EEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             EEEEEeecCcCcEEEEEEEC-CCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcC
Confidence            34578999999999999754 456799999986532   23456789999999999999999999999999999999999


Q ss_pred             ccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          581 MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       581 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +++|+|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++.....    .
T Consensus       123 ~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~----~  195 (350)
T 1rdq_E          123 VAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----T  195 (350)
T ss_dssp             CTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC----B
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCC----c
Confidence            99999999998878899999999999999999999998   9999999999999999999999999999876432    2


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ....||+.|+|||.+.+..++.++|||||||++|||++|+.||........   .             ..+.....  ..
T Consensus       196 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~---~-------------~~i~~~~~--~~  257 (350)
T 1rdq_E          196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI---Y-------------EKIVSGKV--RF  257 (350)
T ss_dssp             CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---H-------------HHHHHCCC--CC
T ss_pred             ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHH---H-------------HHHHcCCC--CC
Confidence            345799999999999999999999999999999999999999975432111   0             01111111  12


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCC-----HHhHHHH
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRPT-----MRKVTQM  772 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RPs-----~~evl~~  772 (792)
                      +...+..+.+++.+||+.||.+||+     ++||++.
T Consensus       258 p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h  294 (350)
T 1rdq_E          258 PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH  294 (350)
T ss_dssp             CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred             CCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence            2334567889999999999999998     8888764

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.2e-38  Score=340.46  Aligned_cols=248  Identities=29%  Similarity=0.466  Sum_probs=193.5

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      .+.+.||+|+||+||++...   ++.||||++..  ....+.+.+|++++++++||||+++++++.+  ..++||||+++
T Consensus        11 ~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~~   83 (307)
T 2eva_A           11 EVEEVVGRGAFGVVCKAKWR---AKDVAIKQIES--ESERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEG   83 (307)
T ss_dssp             EEEEEEECCSSSEEEEEEET---TEEEEEEECSS--TTHHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCTT
T ss_pred             eeeeEeecCCCceEEEEEEC---CeeEEEEEecC--hhHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCCC
Confidence            34578999999999999764   56899999865  3446789999999999999999999999874  47999999999


Q ss_pred             CCccccccCCC---CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCC-eEEeecCCCccccCCCCCc
Q 003836          584 GTVASFLFGDS---KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYN-ARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       584 gsL~~~l~~~~---~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~-~kl~Dfg~a~~~~~~~~~~  659 (792)
                      |+|.+++....   .+++..++.++.||++||+|||+....+|+||||||+|||++.++. +||+|||+++.....    
T Consensus        84 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~----  159 (307)
T 2eva_A           84 GSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH----  159 (307)
T ss_dssp             CBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-----------
T ss_pred             CCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc----
Confidence            99999998664   3678899999999999999999932238999999999999998887 799999999765322    


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      .....||+.|+|||.+.+..++.++||||||+++|||++|+.||..........   .+.  .          .......
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~---~~~--~----------~~~~~~~  224 (307)
T 2eva_A          160 MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRI---MWA--V----------HNGTRPP  224 (307)
T ss_dssp             -----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHH---HHH--H----------HTTCCCC
T ss_pred             cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHH---HHH--H----------hcCCCCC
Confidence            223458999999999999999999999999999999999999996532211100   000  0          0001111


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      .....+..+.+++.+||+.||++|||++|++++|+.+.
T Consensus       225 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  262 (307)
T 2eva_A          225 LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM  262 (307)
T ss_dssp             CBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHG
T ss_pred             cccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence            12234567889999999999999999999999998764

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=5.8e-39  Score=341.17  Aligned_cols=259  Identities=16%  Similarity=0.216  Sum_probs=206.3

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEEEec
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +.+.+.||+|+||.||+|.. ..+++.||||++...  ...+.+.+|+++++++ +|+|++++++++.+....++||||+
T Consensus        12 y~~~~~lg~G~~g~V~~~~~-~~~~~~vavK~~~~~--~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~   88 (298)
T 1csn_A           12 YKVGRRIGEGSFGVIFEGTN-LLNNQQVAIKFEPRR--SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL   88 (298)
T ss_dssp             EEEEEEEEECSSCEEEEEEE-TTTTEEEEEEEEECC--TTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred             eEEEEEEeecCCEEEEEEEE-CCCCcEEEEEEeccC--CccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec
Confidence            34557899999999999974 356789999998653  2345688999999999 7999999999999999999999999


Q ss_pred             cCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCC-----eEEeecCCCccccCC
Q 003836          582 SNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYN-----ARISDFGLAKLLTLD  655 (792)
Q Consensus       582 ~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~-----~kl~Dfg~a~~~~~~  655 (792)
                       +++|.+++... ..+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.     +||+|||+++.....
T Consensus        89 -~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~  164 (298)
T 1csn_A           89 -GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP  164 (298)
T ss_dssp             -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred             -CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc
Confidence             99999999765 4689999999999999999999998   9999999999999987776     999999999876544


Q ss_pred             CCC------ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchh
Q 003836          656 QSH------TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLE  729 (792)
Q Consensus       656 ~~~------~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  729 (792)
                      ...      ......||+.|+|||.+.+..++.++||||||+++|||++|+.||.................... .....
T Consensus       165 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~  243 (298)
T 1csn_A          165 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQ-STPLR  243 (298)
T ss_dssp             TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHH-HSCHH
T ss_pred             cccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhcc-CccHH
Confidence            321      23345699999999999999999999999999999999999999976432211111111100000 00000


Q ss_pred             HhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          730 ALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       730 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                      .+         ....++.+.+++.+||+.+|++||++++|++.|+.+.+
T Consensus       244 ~~---------~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~  283 (298)
T 1csn_A          244 EL---------CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE  283 (298)
T ss_dssp             HH---------TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred             HH---------HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHH
Confidence            00         11234678899999999999999999999999988653

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=7.7e-39  Score=349.82  Aligned_cols=251  Identities=21%  Similarity=0.267  Sum_probs=193.6

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.+.||+|+||+||++... .+++.||||++.... ...+.+.+|+.++++++||||+++++++.+....++||||++
T Consensus        22 y~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~   99 (361)
T 3uc3_A           22 YDFVKDIGSGNFGVARLMRDK-LTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYAS   99 (361)
T ss_dssp             EEEEEEESSSTTSSEEEEEET-TTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred             EEEEEEeccCCCEEEEEEEEC-CCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCC
Confidence            445678999999999999754 456799999997543 334678999999999999999999999999999999999999


Q ss_pred             CCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCC--eEEeecCCCccccCCCCCcc
Q 003836          583 NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYN--ARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       583 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~--~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +|+|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.  +||+|||+++.....  ...
T Consensus       100 ~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~--~~~  174 (361)
T 3uc3_A          100 GGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH--SQP  174 (361)
T ss_dssp             SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC-----------
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccccccc--CCC
Confidence            999999998778899999999999999999999998   9999999999999987765  999999999854322  222


Q ss_pred             ccccccCCcccccccccCCCCcc-cceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVK-VDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k-~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      ....||+.|+|||.+.+..++.+ +|||||||++|||++|+.||............            +..+........
T Consensus       175 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~------------~~~~~~~~~~~~  242 (361)
T 3uc3_A          175 KSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKT------------IQRILSVKYSIP  242 (361)
T ss_dssp             ------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHH------------HHHHHTTCCCCC
T ss_pred             CCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHH------------HHHHhcCCCCCC
Confidence            34569999999999988887665 89999999999999999999754332111100            111111111111


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .....+..+.+++.+||+.||++|||++|+++.
T Consensus       243 ~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h  275 (361)
T 3uc3_A          243 DDIRISPECCHLISRIFVADPATRISIPEIKTH  275 (361)
T ss_dssp             TTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             CcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence            111235678899999999999999999999975

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=7e-39  Score=345.10  Aligned_cols=249  Identities=20%  Similarity=0.278  Sum_probs=181.6

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccC-CCCcccccceeccCCceEEEEEeccCCC
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH-HKNLVRLLGYCDEGQNRLLVYEFMSNGT  585 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~g~~~~~~~~~lV~E~~~~gs  585 (792)
                      +.||+|+||+||++... .+++.||||++..   .....+.+|+.++.+++ ||||+++++++.+....++||||+++|+
T Consensus        17 ~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~---~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~   92 (325)
T 3kn6_A           17 KPLGEGSFSICRKCVHK-KSNQAFAVKIISK---RMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE   92 (325)
T ss_dssp             CCSEEETTEEEEEEEET-TTCCEEEEEEEEG---GGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             CccccCCCeEEEEEEEC-CCCCEEEEEEECh---hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence            57999999999999754 4568999999864   34567889999999997 9999999999999999999999999999


Q ss_pred             ccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCC---CeEEeecCCCccccCCCCCcccc
Q 003836          586 VASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY---NARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       586 L~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~---~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      |.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++   .+||+|||+++...... .....
T Consensus        93 L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~  168 (325)
T 3kn6_A           93 LFERIKKKKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN-QPLKT  168 (325)
T ss_dssp             HHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC--------
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC-Ccccc
Confidence            999998888899999999999999999999998   999999999999998765   79999999998654332 22334


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc--C
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM--N  740 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  740 (792)
                      ..||+.|+|||.+.+..++.++||||||+++|||++|+.||...............         +..+........  .
T Consensus       169 ~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~---------~~~i~~~~~~~~~~~  239 (325)
T 3kn6_A          169 PCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEI---------MKKIKKGDFSFEGEA  239 (325)
T ss_dssp             ---------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHH---------HHHHTTTCCCCCSHH
T ss_pred             cCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHH---------HHHHHcCCCCCCccc
Confidence            56899999999999999999999999999999999999999754321110000000         011111111100  0


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ....++++.+++.+||+.||++|||++|+++.
T Consensus       240 ~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h  271 (325)
T 3kn6_A          240 WKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN  271 (325)
T ss_dssp             HHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred             ccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence            12245778999999999999999999999864

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.7e-38  Score=337.56  Aligned_cols=254  Identities=24%  Similarity=0.389  Sum_probs=203.7

Q ss_pred             hhhcCccccceEEEeeecCC--CceEEEEEEcccccc-cchHHHHHHHHHhcccCCCCcccccceeccCCce-EEEEEec
Q 003836          506 KEELGRGAFGTVYKGFVNMG--SSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNR-LLVYEFM  581 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~--~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~-~lV~E~~  581 (792)
                      .+.||+|+||+||+|.....  ....+|+|++..... ...+.+.+|+.++++++||||+++++++.+.+.. ++||||+
T Consensus        26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~  105 (298)
T 3pls_A           26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYM  105 (298)
T ss_dssp             EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCC
T ss_pred             CceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecc
Confidence            36799999999999976432  334799999876433 3456789999999999999999999999877665 9999999


Q ss_pred             cCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC---C
Q 003836          582 SNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ---S  657 (792)
Q Consensus       582 ~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~---~  657 (792)
                      .+|+|.+++... ..+++..+..++.|++.||+|||+.   +|+||||||+|||+++++.+||+|||+++......   .
T Consensus       106 ~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~  182 (298)
T 3pls_A          106 CHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSV  182 (298)
T ss_dssp             TTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCS
T ss_pred             cCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCccccc
Confidence            999999999764 5689999999999999999999999   99999999999999999999999999998654332   1


Q ss_pred             CccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhc
Q 003836          658 HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLE  737 (792)
Q Consensus       658 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  737 (792)
                      .......+++.|+|||.+.+..++.++||||||+++|||++|+.|+........                +...+.....
T Consensus       183 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~----------------~~~~~~~~~~  246 (298)
T 3pls_A          183 QQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD----------------LTHFLAQGRR  246 (298)
T ss_dssp             CCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGG----------------HHHHHHTTCC
T ss_pred             ccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHH----------------HHHHhhcCCC
Confidence            222345678899999999999999999999999999999997776543322211                1111111111


Q ss_pred             ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          738 AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       738 ~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                      ...+...+..+.+++.+||+.||.+|||++++++.|+.+++
T Consensus       247 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~  287 (298)
T 3pls_A          247 LPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVS  287 (298)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            12223345678899999999999999999999999988653

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=1.3e-38  Score=341.82  Aligned_cols=258  Identities=24%  Similarity=0.287  Sum_probs=203.2

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceec----cCCceEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCD----EGQNRLLVY  578 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~----~~~~~~lV~  578 (792)
                      +.+.+.||+|+||.||++... .+++.||||++........+.+.+|++++++++||||+++++++.    .....++||
T Consensus        31 y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~  109 (317)
T 2buj_A           31 YLFIQKLGEGGFSYVDLVEGL-HDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLL  109 (317)
T ss_dssp             EEEEEEEEC--CEEEEEEEET-TTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEE
T ss_pred             EEEEEEecCCCCeEEEEEEec-CCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEE
Confidence            345678999999999999753 456899999987665666778999999999999999999999986    345788999


Q ss_pred             EeccCCCccccccC----CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccC
Q 003836          579 EFMSNGTVASFLFG----DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL  654 (792)
Q Consensus       579 E~~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~  654 (792)
                      ||+++|+|.+++..    ...+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++....
T Consensus       110 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~  186 (317)
T 2buj_A          110 PFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACI  186 (317)
T ss_dssp             ECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEESCE
T ss_pred             EeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhccc
Confidence            99999999999865    46789999999999999999999999   999999999999999999999999999876532


Q ss_pred             CCCCc--------cccccccCCcccccccccCC---CCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhh
Q 003836          655 DQSHT--------NTAIRGTKGYVAPEWFRNMP---ITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRY  723 (792)
Q Consensus       655 ~~~~~--------~~~~~gt~~y~aPE~~~~~~---~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~  723 (792)
                      .....        .....||+.|+|||.+....   ++.++||||||+++|||++|+.||.........           
T Consensus       187 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-----------  255 (317)
T 2buj_A          187 HVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS-----------  255 (317)
T ss_dssp             EEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSC-----------
T ss_pred             ccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccch-----------
Confidence            21111        12235799999999987543   789999999999999999999998543221110           


Q ss_pred             cccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCC
Q 003836          724 QERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEV  779 (792)
Q Consensus       724 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~  779 (792)
                          .................+..+.+++.+||+.||.+|||++|+++.|+.+...
T Consensus       256 ----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  307 (317)
T 2buj_A          256 ----VALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP  307 (317)
T ss_dssp             ----HHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred             ----hhHHhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence                0011111111112223456789999999999999999999999999987543

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=6.2e-39  Score=346.87  Aligned_cols=253  Identities=25%  Similarity=0.432  Sum_probs=198.5

Q ss_pred             hhhhcCccccceEEEeeecCCC---ceEEEEEEcccccc-cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          505 FKEELGRGAFGTVYKGFVNMGS---SNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~---~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      +.+.||+|+||+||+|......   +..||||++..... .....+.+|++++++++||||+++++++.+.+..++||||
T Consensus        48 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  127 (333)
T 1mqb_A           48 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEY  127 (333)
T ss_dssp             EEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             cccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeC
Confidence            3467999999999999865332   34699999975432 3456789999999999999999999999999999999999


Q ss_pred             ccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          581 MSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       581 ~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      +++|+|.+++... ..+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++.........
T Consensus       128 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~  204 (333)
T 1mqb_A          128 MENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAT  204 (333)
T ss_dssp             CTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-----------
T ss_pred             CCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhccccccc
Confidence            9999999999764 5789999999999999999999999   99999999999999999999999999998765432221


Q ss_pred             --cccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          660 --NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       660 --~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                        .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||........   .              ..+....
T Consensus       205 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~---~--------------~~~~~~~  267 (333)
T 1mqb_A          205 YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEV---M--------------KAINDGF  267 (333)
T ss_dssp             ------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH---H--------------HHHHTTC
T ss_pred             cccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHH---H--------------HHHHCCC
Confidence              122346788999999999999999999999999999999 9999965432110   0              0011111


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      ....+...+..+.+++.+||+.+|++||++.+++++|+.++
T Consensus       268 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~  308 (333)
T 1mqb_A          268 RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI  308 (333)
T ss_dssp             CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            11222344567889999999999999999999999997754

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=3.3e-39  Score=370.85  Aligned_cols=256  Identities=26%  Similarity=0.400  Sum_probs=208.6

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.++||+|+||.||+|.+..  ...||||+++... ...++|.+|++++++++|+||+++++++.+ +..+|||||++
T Consensus       269 ~~~~~~lG~G~fg~Vy~~~~~~--~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~  344 (535)
T 2h8h_A          269 LRLEVKLGQGCFGEVWMGTWNG--TTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS  344 (535)
T ss_dssp             EEEEEEEEECSSEEEEEEEETT--TEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred             hhhheecccCCCeEEEEEEECC--CceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhc
Confidence            3456789999999999998753  3579999997643 345789999999999999999999999976 67899999999


Q ss_pred             CCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          583 NGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       583 ~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +|+|.++|...  ..+++..+..|+.||+.||+|||++   +|+||||||+|||+++++.+||+|||+++..........
T Consensus       345 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  421 (535)
T 2h8h_A          345 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR  421 (535)
T ss_dssp             TEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTT
T ss_pred             CCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecc
Confidence            99999999753  5689999999999999999999998   999999999999999999999999999987643222222


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      ....++..|+|||.+....++.++|||||||+||||++ |+.||........                 ...+.......
T Consensus       422 ~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~-----------------~~~i~~~~~~~  484 (535)
T 2h8h_A          422 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV-----------------LDQVERGYRMP  484 (535)
T ss_dssp             CSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHH-----------------HHHHHTTCCCC
T ss_pred             cCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH-----------------HHHHHcCCCCC
Confidence            23446788999999999999999999999999999999 8999865432110                 01111112222


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCCCCC
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPIP  782 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~~~p  782 (792)
                      .+...+..+.+|+.+||+.||++|||+++|+++|+.+..-..|
T Consensus       485 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~  527 (535)
T 2h8h_A          485 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP  527 (535)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCSC
T ss_pred             CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccCc
Confidence            2334567788999999999999999999999999998654433

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=9.2e-39  Score=346.71  Aligned_cols=254  Identities=22%  Similarity=0.295  Sum_probs=201.8

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      .+.+.||+|+||.||++... .+++.||+|++.+..   ....+.+.+|+.++.++ +||||+++++++.+.+..++|||
T Consensus        12 ~~~~~lG~G~fg~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e   90 (345)
T 3a8x_A           12 DLLRVIGRGSYAKVLLVRLK-KTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIE   90 (345)
T ss_dssp             EEEEEEEECSSEEEEEEEET-TTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred             EEEEEEEecCCeEEEEEEEC-CCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEe
Confidence            34578999999999999764 457899999997643   22345688999999987 89999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      |+++|+|.+++.....+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++...... ..
T Consensus        91 ~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~-~~  166 (345)
T 3a8x_A           91 YVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG-DT  166 (345)
T ss_dssp             CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT-CC
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccCCC-Cc
Confidence            999999999998778899999999999999999999998   99999999999999999999999999998643222 22


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhh-hhHHHHHHHhhcccchhHhhhchhcc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDK-AILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||......... .......        ...+.....  
T Consensus       167 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~--------~~~i~~~~~--  236 (345)
T 3a8x_A          167 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL--------FQVILEKQI--  236 (345)
T ss_dssp             BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHH--------HHHHHHCCC--
T ss_pred             ccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHH--------HHHHHcCCC--
Confidence            34567999999999999999999999999999999999999999643211000 0000000        011111111  


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCH------HhHHHH
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTM------RKVTQM  772 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~------~evl~~  772 (792)
                      ..+...+.++.+++.+||+.||++||++      +|+++.
T Consensus       237 ~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h  276 (345)
T 3a8x_A          237 RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH  276 (345)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred             CCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence            1233455678899999999999999995      566653

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=1.1e-38  Score=346.72  Aligned_cols=247  Identities=25%  Similarity=0.328  Sum_probs=203.3

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccc---cccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV---FQDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~  578 (792)
                      +.+.+.||+|+||.||++... .+++.||+|++++.   .....+.+.+|..++..+ +||||+++++++.+.+..++||
T Consensus        22 y~~~~~lG~G~fg~V~~~~~~-~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~  100 (353)
T 2i0e_A           22 FNFLMVLGKGSFGKVMLSERK-GTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM  100 (353)
T ss_dssp             EEEEEEEEEETTEEEEEEEET-TEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cEEEEEEeeCCCEEEEEEEEC-CCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEE
Confidence            345578999999999999754 55789999999754   234456788999999988 8999999999999999999999


Q ss_pred             EeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          579 EFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       579 E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      ||+++|+|.+++.....+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++...... .
T Consensus       101 E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~-~  176 (353)
T 2i0e_A          101 EYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG-V  176 (353)
T ss_dssp             ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT-C
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccccCC-c
Confidence            9999999999998777899999999999999999999998   99999999999999999999999999998643222 2


Q ss_pred             ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          659 TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      ......||+.|+|||++.+..++.++|||||||++|||++|+.||........   .             ..+.....  
T Consensus       177 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~---~-------------~~i~~~~~--  238 (353)
T 2i0e_A          177 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL---F-------------QSIMEHNV--  238 (353)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---H-------------HHHHHCCC--
T ss_pred             ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHH---H-------------HHHHhCCC--
Confidence            23456799999999999999999999999999999999999999975432111   0             11111111  


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCC-----HHhHHHH
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPT-----MRKVTQM  772 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs-----~~evl~~  772 (792)
                      ..+...+.++.+++.+||+.||.+||+     +++|++.
T Consensus       239 ~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h  277 (353)
T 2i0e_A          239 AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH  277 (353)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred             CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence            122345567889999999999999995     5777654

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=9e-39  Score=347.71  Aligned_cols=245  Identities=24%  Similarity=0.336  Sum_probs=187.0

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      .+.+.||+|+||.||+|... .+++.||||++....  ..+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus        56 ~~~~~lG~G~~g~Vy~~~~~-~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~  132 (349)
T 2w4o_A           56 EVESELGRGATSIVYRCKQK-GTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTG  132 (349)
T ss_dssp             EEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             EEeeEEeeCCCEEEEEEEEC-CCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCC
Confidence            34578999999999999764 456789999997642  456788999999999999999999999999999999999999


Q ss_pred             CCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC---CCCeEEeecCCCccccCCCCCcc
Q 003836          584 GTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD---HYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       584 gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~---~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      |+|.+++.....+++..+..++.||+.||.|||+.   +|+||||||+|||++.   ++.+||+|||+++.....  ...
T Consensus       133 ~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~--~~~  207 (349)
T 2w4o_A          133 GELFDRIVEKGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ--VLM  207 (349)
T ss_dssp             CBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC-------------
T ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCcc--ccc
Confidence            99999998888899999999999999999999998   9999999999999975   889999999999875432  222


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh--cc
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL--EA  738 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  738 (792)
                      ....||+.|+|||.+.+..++.++|||||||++|||++|+.||........  ..     .        .+.....  ..
T Consensus       208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~--~~-----~--------~i~~~~~~~~~  272 (349)
T 2w4o_A          208 KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF--MF-----R--------RILNCEYYFIS  272 (349)
T ss_dssp             -----CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH--HH-----H--------HHHTTCCCCCT
T ss_pred             ccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH--HH-----H--------HHHhCCCccCC
Confidence            345689999999999999999999999999999999999999965432211  00     0        0111100  00


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ......+.++.+++.+||+.||++|||+.|+++
T Consensus       273 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  305 (349)
T 2w4o_A          273 PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ  305 (349)
T ss_dssp             TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             chhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            111234567889999999999999999999998

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=1.1e-38  Score=341.41  Aligned_cols=250  Identities=22%  Similarity=0.256  Sum_probs=194.7

Q ss_pred             HHHHHHHHhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccc--cchHHHHHHHHHhccc-CCCCcccccceeccC
Q 003836          495 YKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ--DSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEG  571 (792)
Q Consensus       495 ~~el~~~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~  571 (792)
                      ..++....+.+.++||+|+||+||+|... .+++.||||++.....  .....+..|+..+.++ +|+||+++++++.++
T Consensus        51 ~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~  129 (311)
T 3p1a_A           51 PESFFQQSFQRLSRLGHGSYGEVFKVRSK-EDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEG  129 (311)
T ss_dssp             SSCHHHHHEEEEEEEEEETTEEEEEEEET-TTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred             ccchhhhheeeeheeccCCCeEEEEEEEC-CCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeC
Confidence            34455556666789999999999999764 4567999999865432  2334555666666555 899999999999999


Q ss_pred             CceEEEEEeccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCc
Q 003836          572 QNRLLVYEFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK  650 (792)
Q Consensus       572 ~~~~lV~E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~  650 (792)
                      +..++||||+ +++|.+++... ..+++..+..|+.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++
T Consensus       130 ~~~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~  205 (311)
T 3p1a_A          130 GILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLV  205 (311)
T ss_dssp             TEEEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCE
T ss_pred             CEEEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeee
Confidence            9999999999 66888888654 4689999999999999999999998   99999999999999999999999999998


Q ss_pred             cccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhH
Q 003836          651 LLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEA  730 (792)
Q Consensus       651 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  730 (792)
                      ......  ......||+.|+|||++.+ .++.++|||||||++|||++|..++......           ........  
T Consensus       206 ~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~-----------~~~~~~~~--  269 (311)
T 3p1a_A          206 ELGTAG--AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGW-----------QQLRQGYL--  269 (311)
T ss_dssp             ECC--------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHH-----------HHHTTTCC--
T ss_pred             ecccCC--CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHH-----------HHHhccCC--
Confidence            764322  2334568999999999876 7999999999999999999998776543110           01111110  


Q ss_pred             hhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          731 LVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       731 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                            ........+.++.+++.+||+.||++|||++|+++
T Consensus       270 ------~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          270 ------PPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             ------CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ------CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence                  00111123467889999999999999999999997

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=4.5e-39  Score=375.95  Aligned_cols=249  Identities=29%  Similarity=0.406  Sum_probs=202.7

Q ss_pred             hhcCccccceEEEeeecC-CCceEEEEEEcccccc--cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          507 EELGRGAFGTVYKGFVNM-GSSNHVAVKKLNSVFQ--DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~-~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      ++||+|+||.||+|.+.. ..++.||||+++....  ...+++.+|++++++++|||||++++++.+ +..++||||+++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence            469999999999996643 3457899999976433  335789999999999999999999999964 568899999999


Q ss_pred             CCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC--ccc
Q 003836          584 GTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH--TNT  661 (792)
Q Consensus       584 gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~--~~~  661 (792)
                      |+|.+++.....+++..+..|+.||+.||+|||++   +|+||||||+||||+.++.+||+|||+++........  ...
T Consensus       454 g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~  530 (635)
T 4fl3_A          454 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT  530 (635)
T ss_dssp             EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---------
T ss_pred             CCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccccc
Confidence            99999998888899999999999999999999998   9999999999999999999999999999876544322  222


Q ss_pred             cccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ...+|+.|+|||++.+..++.++|||||||++|||++ |+.||.......                 +...+........
T Consensus       531 ~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~-----------------~~~~i~~~~~~~~  593 (635)
T 4fl3_A          531 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE-----------------VTAMLEKGERMGC  593 (635)
T ss_dssp             ----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-----------------HHHHHHTTCCCCC
T ss_pred             CCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-----------------HHHHHHcCCCCCC
Confidence            3456789999999999999999999999999999998 999997543221                 1111122222233


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                      +...+.++.+++..||+.||++||++++|++.|+.+
T Consensus       594 p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~  629 (635)
T 4fl3_A          594 PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY  629 (635)
T ss_dssp             CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            444567889999999999999999999999999864

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=4.8e-39  Score=347.99  Aligned_cols=258  Identities=24%  Similarity=0.346  Sum_probs=207.5

Q ss_pred             HhhhhhhcCccccceEEEeeecC------CCceEEEEEEcccccc-cchHHHHHHHHHhccc-CCCCcccccceeccCCc
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNM------GSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQN  573 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~------~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~  573 (792)
                      .+.+.+.||+|+||.||+|....      ..++.||||++..... ...+.+.+|+++++++ +||||+++++++.+.+.
T Consensus        36 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~  115 (334)
T 2pvf_A           36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP  115 (334)
T ss_dssp             GEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSC
T ss_pred             HeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCc
Confidence            34556889999999999997632      3456899999976432 3456789999999999 89999999999999999


Q ss_pred             eEEEEEeccCCCccccccCCC----------------CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC
Q 003836          574 RLLVYEFMSNGTVASFLFGDS----------------KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD  637 (792)
Q Consensus       574 ~~lV~E~~~~gsL~~~l~~~~----------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~  637 (792)
                      .++||||+++|+|.+++....                .+++..+..++.||+.||+|||+.   +|+||||||+|||++.
T Consensus       116 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~  192 (334)
T 2pvf_A          116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTE  192 (334)
T ss_dssp             CEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECT
T ss_pred             eEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEEcC
Confidence            999999999999999997643                378899999999999999999998   9999999999999999


Q ss_pred             CCCeEEeecCCCccccCCCCC-ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhH
Q 003836          638 HYNARISDFGLAKLLTLDQSH-TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAIL  715 (792)
Q Consensus       638 ~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~  715 (792)
                      ++.+||+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||.........   
T Consensus       193 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~---  269 (334)
T 2pvf_A          193 NNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF---  269 (334)
T ss_dssp             TCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH---
T ss_pred             CCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHH---
Confidence            999999999999876543322 2233457889999999988889999999999999999999 99998654321100   


Q ss_pred             HHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCC
Q 003836          716 TDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEV  779 (792)
Q Consensus       716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~  779 (792)
                                    ..+........+...+..+.+++.+||+.+|.+|||++|+++.|++++..
T Consensus       270 --------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~  319 (334)
T 2pvf_A          270 --------------KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL  319 (334)
T ss_dssp             --------------HHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             --------------HHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence                          00111111112233456788999999999999999999999999887643

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=4.1e-39  Score=344.84  Aligned_cols=265  Identities=22%  Similarity=0.309  Sum_probs=198.2

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccc---cchHHHHHHHHHhcccCCCCcccccceeccCCc----eE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ---DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQN----RL  575 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~----~~  575 (792)
                      +.+.+.||+|+||.||++... .+++.||||++.....   .....+.+|++++++++||||+++++++.....    .+
T Consensus        14 y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~   92 (311)
T 3ork_A           14 YELGEILGFGGMSEVHLARDL-RDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY   92 (311)
T ss_dssp             EEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred             EEEEEEEccCCCEEEEEEEEC-CCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccE
Confidence            345678999999999999753 4578999999976432   234578999999999999999999999876554    39


Q ss_pred             EEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCC
Q 003836          576 LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD  655 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~  655 (792)
                      +||||+++++|.+++.....+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++.....
T Consensus        93 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~  169 (311)
T 3ork_A           93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADS  169 (311)
T ss_dssp             EEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC------
T ss_pred             EEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCccccccc
Confidence            9999999999999998878899999999999999999999998   9999999999999999999999999999876543


Q ss_pred             CCC--ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhh
Q 003836          656 QSH--TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVE  733 (792)
Q Consensus       656 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  733 (792)
                      ...  ......||+.|+|||.+.+..++.++||||||+++|||++|+.||........       ............   
T Consensus       170 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~-------~~~~~~~~~~~~---  239 (311)
T 3ork_A          170 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV-------AYQHVREDPIPP---  239 (311)
T ss_dssp             ------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-------HHHHHHCCCCCH---
T ss_pred             ccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH-------HHHHhcCCCCCc---
Confidence            222  22345689999999999999999999999999999999999999976432211       001111100000   


Q ss_pred             chhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHH-HHhccCcCCCCCCCC
Q 003836          734 NDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVT-QMLEGVVEVPIPPCP  785 (792)
Q Consensus       734 ~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl-~~L~~~~~~~~p~~P  785 (792)
                          .......+.++.+++.+||+.||++||+..+++ +.+..+.....|..|
T Consensus       240 ----~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~~~~~  288 (311)
T 3ork_A          240 ----SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP  288 (311)
T ss_dssp             ----HHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTTCCCSSC
T ss_pred             ----ccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcCCCCCCC
Confidence                000112356788999999999999999666555 555554444444333

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=1.1e-38  Score=343.81  Aligned_cols=248  Identities=22%  Similarity=0.262  Sum_probs=193.9

Q ss_pred             hhhhhhcCccccceEEEeeec--CCCceEEEEEEccccc----ccchHHHHHHHHHhcccCCCCcccccceeccCCceEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVN--MGSSNHVAVKKLNSVF----QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLL  576 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~--~~~~~~vavK~~~~~~----~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~l  576 (792)
                      +.+.+.||+|+||.||++...  ..+++.+|+|++++..    ......+.+|+.++++++||||+++++++.+.+..++
T Consensus        19 y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l   98 (327)
T 3a62_A           19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYL   98 (327)
T ss_dssp             EEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEE
T ss_pred             eEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEE
Confidence            345678999999999999763  2456899999997642    2234568899999999999999999999999999999


Q ss_pred             EEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC
Q 003836          577 VYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~  656 (792)
                      ||||+++++|.+++.....+++..+..++.||+.||.|||++   +|+||||||+|||++.++.+||+|||+++......
T Consensus        99 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~  175 (327)
T 3a62_A           99 ILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG  175 (327)
T ss_dssp             EEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC-------
T ss_pred             EEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcccccccCC
Confidence            999999999999998777889999999999999999999999   99999999999999999999999999998643222


Q ss_pred             CCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          657 SHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       657 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                      . ......||+.|+|||.+.+..++.++||||||+++|||++|+.||........   .             ..+.... 
T Consensus       176 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~---~-------------~~i~~~~-  237 (327)
T 3a62_A          176 T-VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKT---I-------------DKILKCK-  237 (327)
T ss_dssp             ----CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---H-------------HHHHHTC-
T ss_pred             c-cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHH---H-------------HHHHhCC-
Confidence            2 22345689999999999999999999999999999999999999975432211   0             0111111 


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCCCC-----CHHhHHHH
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSHRP-----TMRKVTQM  772 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RP-----s~~evl~~  772 (792)
                       ...+...+..+.+++.+||+.||++||     +++|+++.
T Consensus       238 -~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h  277 (327)
T 3a62_A          238 -LNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH  277 (327)
T ss_dssp             -CCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred             -CCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence             112223456788999999999999999     77788764

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=4.7e-39  Score=356.17  Aligned_cols=249  Identities=19%  Similarity=0.211  Sum_probs=199.7

Q ss_pred             hhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      .++||+|+||.||++... .+++.||||++.+..   ....+.+.+|+.++.+++||||+++++++.+.+..+|||||++
T Consensus        66 ~~~lG~G~fG~V~~~~~~-~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~  144 (412)
T 2vd5_A           66 LKVIGRGAFSEVAVVKMK-QTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYV  144 (412)
T ss_dssp             EEEEEECSSCEEEEEEET-TTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCC
T ss_pred             EEEEeeCCCeEEEEEEEC-CCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCC
Confidence            468999999999999764 467899999997532   2233458899999999999999999999999999999999999


Q ss_pred             CCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          583 NGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       583 ~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      +|+|.+++.+. ..+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++...........
T Consensus       145 gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~~  221 (412)
T 2vd5_A          145 GGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSL  221 (412)
T ss_dssp             SCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECS
T ss_pred             CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechhheeccCCCccccc
Confidence            99999999764 4789999999999999999999998   9999999999999999999999999999877554443344


Q ss_pred             cccccCCcccccccc-------cCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhc
Q 003836          662 AIRGTKGYVAPEWFR-------NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEN  734 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~-------~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  734 (792)
                      ...||+.|+|||++.       ...++.++|||||||++|||++|+.||...........+..+.         ..+.  
T Consensus       222 ~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~---------~~~~--  290 (412)
T 2vd5_A          222 VAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYK---------EHLS--  290 (412)
T ss_dssp             SCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHH---------HHCC--
T ss_pred             eeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcc---------cCcC--
Confidence            567999999999987       3578999999999999999999999997653321111110000         0000  


Q ss_pred             hhcccCCHHHHHHHHHHHHHccccCCCCC---CCHHhHHHH
Q 003836          735 DLEAMNNVTMLHRFVMVAFWCIQEDPSHR---PTMRKVTQM  772 (792)
Q Consensus       735 ~~~~~~~~~~~~~l~~l~~~Cl~~~p~~R---Ps~~evl~~  772 (792)
                        ....+...+.++.+++.+||+ +|.+|   |+++||++.
T Consensus       291 --~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H  328 (412)
T 2vd5_A          291 --LPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH  328 (412)
T ss_dssp             --CC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred             --CCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence              000112345678899999999 99998   589999875

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.9e-38  Score=339.36  Aligned_cols=262  Identities=19%  Similarity=0.231  Sum_probs=199.3

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccccc---chHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD---SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~---~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +.+.+.||+|+||.||++... .+++.||+|++......   ..+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus        36 y~~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e  114 (309)
T 2h34_A           36 YRLRRLVGRGGMGDVYEAEDT-VRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMR  114 (309)
T ss_dssp             EEEEEEEEECSSSEEEEEEET-TTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             EEEEEEEcCCCCeeEEEEEEc-CCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEE
Confidence            345678999999999999754 45689999999764322   24678999999999999999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      |+++++|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++.........
T Consensus       115 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~  191 (309)
T 2h34_A          115 LINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQ  191 (309)
T ss_dssp             CCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-----------
T ss_pred             ecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccccccccc
Confidence            999999999998878899999999999999999999999   99999999999999999999999999998765443333


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      .....|++.|+|||.+.+..++.++||||||+++|||++|+.||.......    +.    ....... .      ....
T Consensus       192 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~----~~~~~~~-~------~~~~  256 (309)
T 2h34_A          192 LGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSV----MG----AHINQAI-P------RPST  256 (309)
T ss_dssp             -----CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHH----HH----HHHHSCC-C------CGGG
T ss_pred             ccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHH----HH----HHhccCC-C------Cccc
Confidence            345568999999999999999999999999999999999999997643221    00    0000000 0      0011


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCC-CHHhHHHHhccCcCCCCCC
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRP-TMRKVTQMLEGVVEVPIPP  783 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RP-s~~evl~~L~~~~~~~~p~  783 (792)
                      .....+.++.+++.+||+.||++|| +++++++.|+..+.-..+.
T Consensus       257 ~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~~  301 (309)
T 2h34_A          257 VRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATADQD  301 (309)
T ss_dssp             TSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-----
T ss_pred             cCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhccc
Confidence            1223445788999999999999999 9999999999876655443

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=6.6e-39  Score=349.13  Aligned_cols=249  Identities=21%  Similarity=0.278  Sum_probs=200.7

Q ss_pred             HHhhhhhhcCccccceEEEeeecCCCceEEEEEEccccc-----ccchHHHHHHHHHhcccCCCCcccccceeccCCceE
Q 003836          501 VTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-----QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRL  575 (792)
Q Consensus       501 ~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-----~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~  575 (792)
                      ..+.+.+.||+|+||+||++... .+++.||||++....     ....+.+.+|+.++++++||||+++++++.+.+..+
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  102 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINR-ETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY  102 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             cceEEeeEEeeCCCEEEEEEEEC-CCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            45666789999999999999654 456899999986421     224678999999999999999999999999999999


Q ss_pred             EEEEeccCCCccccccCC----CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCC---eEEeecCC
Q 003836          576 LVYEFMSNGTVASFLFGD----SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYN---ARISDFGL  648 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~---~kl~Dfg~  648 (792)
                      +||||+++++|.+++...    ..+++..+..++.||+.||+|||++   +|+||||||+|||++.++.   +||+|||+
T Consensus       103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~  179 (351)
T 3c0i_A          103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV  179 (351)
T ss_dssp             EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred             EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence            999999999998887543    3578999999999999999999998   9999999999999987655   99999999


Q ss_pred             CccccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccch
Q 003836          649 AKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTL  728 (792)
Q Consensus       649 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  728 (792)
                      ++...... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||......    ....           
T Consensus       180 a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~-----------  243 (351)
T 3c0i_A          180 AIQLGESG-LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER----LFEG-----------  243 (351)
T ss_dssp             CEECCTTS-CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHH----HHHH-----------
T ss_pred             eeEecCCC-eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHH----HHHH-----------
Confidence            98765432 2233456999999999999999999999999999999999999999764221    1100           


Q ss_pred             hHhhhchhccc--CCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          729 EALVENDLEAM--NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       729 ~~~~~~~~~~~--~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                        +........  .....+.++.+++.+||+.||++|||+.|+++
T Consensus       244 --i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          244 --IIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             --HHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             --HHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence              000000000  00123467889999999999999999999986

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=2.6e-38  Score=332.56  Aligned_cols=245  Identities=20%  Similarity=0.303  Sum_probs=204.1

Q ss_pred             HhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .+.+.+.||+|+||.||+|... .++..+|+|++........+.+.+|++++++++||||+++++++.+....++||||+
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~-~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   88 (277)
T 3f3z_A           10 YYTLENTIGRGSWGEVKIAVQK-GTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC   88 (277)
T ss_dssp             HEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             hEEeeeEEeecCCEEEEEEEeC-CCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEecc
Confidence            3455678999999999999754 556789999998776667789999999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEE---cCCCCeEEeecCCCccccCCCCC
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILL---DDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl---~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      ++++|.+++.....+++..+..++.|++.||+|||+.   +|+||||||+|||+   +.++.+||+|||++.......  
T Consensus        89 ~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~--  163 (277)
T 3f3z_A           89 TGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK--  163 (277)
T ss_dssp             CSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS--
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc--
Confidence            9999999998888899999999999999999999998   99999999999999   788999999999998765332  


Q ss_pred             ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          659 TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      ......||+.|+|||.+.+. ++.++||||||+++|||++|+.||..........   .             +.....  
T Consensus       164 ~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~---~-------------~~~~~~--  224 (277)
T 3f3z_A          164 MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVML---K-------------IREGTF--  224 (277)
T ss_dssp             CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---H-------------HHHCCC--
T ss_pred             chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHH---H-------------HHhCCC--
Confidence            22345689999999998654 8999999999999999999999997643221100   0             000000  


Q ss_pred             cCCH----HHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          739 MNNV----TMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       739 ~~~~----~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ..+.    ..+..+.+++.+||+.||++|||+.|+++
T Consensus       225 ~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          225 TFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             CCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            0011    23467889999999999999999999986

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.4e-38  Score=336.55  Aligned_cols=249  Identities=27%  Similarity=0.364  Sum_probs=203.6

Q ss_pred             hcCccccceEEEeeec-CCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCCC
Q 003836          508 ELGRGAFGTVYKGFVN-MGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGT  585 (792)
Q Consensus       508 ~lG~G~~g~Vy~g~~~-~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~gs  585 (792)
                      .||+|+||.||+|... ...++.||||+++... ....+.+.+|++++++++||||+++++++ +.+..++||||+++++
T Consensus        17 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~   95 (287)
T 1u59_A           17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGP   95 (287)
T ss_dssp             EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTEE
T ss_pred             cccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCCC
Confidence            7999999999999753 3456789999997643 33457799999999999999999999999 5567899999999999


Q ss_pred             ccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc--ccc
Q 003836          586 VASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT--NTA  662 (792)
Q Consensus       586 L~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~--~~~  662 (792)
                      |.+++... ..+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++.........  ...
T Consensus        96 L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~  172 (287)
T 1u59_A           96 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA  172 (287)
T ss_dssp             HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCS
T ss_pred             HHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeecccc
Confidence            99999754 5689999999999999999999999   99999999999999999999999999998765433221  223


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCC
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN  741 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  741 (792)
                      ..+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.........                 ..+........+
T Consensus       173 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~-----------------~~i~~~~~~~~~  235 (287)
T 1u59_A          173 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVM-----------------AFIEQGKRMECP  235 (287)
T ss_dssp             SCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHH-----------------HHHHTTCCCCCC
T ss_pred             ccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHH-----------------HHHhcCCcCCCC
Confidence            346889999999988889999999999999999998 99999654321110                 011111112223


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          742 VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       742 ~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      ...+..+.+++.+||+.+|++||++.++++.|+.+.
T Consensus       236 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  271 (287)
T 1u59_A          236 PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY  271 (287)
T ss_dssp             TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            345678899999999999999999999999998864

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=1.2e-38  Score=358.74  Aligned_cols=247  Identities=23%  Similarity=0.258  Sum_probs=194.3

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccc---cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV---FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +.+.+.||+|+||.||++.. ..+++.||||++...   .......+.+|++++++++||||+++++++.+.+..++|||
T Consensus       150 y~~~~~lG~G~~g~V~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e  228 (446)
T 4ejn_A          150 FEYLKLLGKGTFGKVILVKE-KATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVME  228 (446)
T ss_dssp             EEEEEEEEEETTEEEEEEEE-TTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEEC
T ss_pred             cEEeEEEeeCcCEEEEEEEE-cCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEe
Confidence            33457899999999999975 456789999998753   23344678899999999999999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhh-ccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE-ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      |+++|+|.+++.....+++..+..++.||+.||+|||+ .   +|+||||||+||||+.++.+||+|||+++...... .
T Consensus       229 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~  304 (446)
T 4ejn_A          229 YANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG-A  304 (446)
T ss_dssp             CCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC----
T ss_pred             eCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceeccCCC-c
Confidence            99999999999887889999999999999999999998 7   99999999999999999999999999998643322 2


Q ss_pred             ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          659 TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      ......||+.|+|||++.+..++.++|||||||++|||++|+.||.........                ..+.....  
T Consensus       305 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~----------------~~i~~~~~--  366 (446)
T 4ejn_A          305 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF----------------ELILMEEI--  366 (446)
T ss_dssp             --CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----------------HHHHHCCC--
T ss_pred             ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHH----------------HHHHhCCC--
Confidence            234467999999999999999999999999999999999999999654322110                00111111  


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCC-----CHHhHHHH
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRP-----TMRKVTQM  772 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RP-----s~~evl~~  772 (792)
                      ..+...+.++.+++.+||+.||.+||     +++|+++.
T Consensus       367 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h  405 (446)
T 4ejn_A          367 RFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH  405 (446)
T ss_dssp             CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             CCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence            12223456788999999999999999     99999863

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=3.1e-38  Score=339.66  Aligned_cols=250  Identities=24%  Similarity=0.313  Sum_probs=204.3

Q ss_pred             HhhhhhhcCccccceEEEeeecCCCceEEEEEEccccccc------chHHHHHHHHHhcccCCCCcccccceeccCCceE
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD------SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRL  575 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~------~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~  575 (792)
                      .+.+.+.||+|+||.||++... .+++.||+|++......      ..+.+.+|+.++++++||||+++++++.+....+
T Consensus        13 ~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (321)
T 2a2a_A           13 FYDIGEELGSGQFAIVKKCREK-STGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV   91 (321)
T ss_dssp             HEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cEEEeeEeeecCCEEEEEEEEC-CCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence            4556789999999999999754 45679999998754322      3578999999999999999999999999999999


Q ss_pred             EEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCC----CeEEeecCCCcc
Q 003836          576 LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY----NARISDFGLAKL  651 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~----~~kl~Dfg~a~~  651 (792)
                      +||||+++++|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++    .+||+|||+++.
T Consensus        92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~  168 (321)
T 2a2a_A           92 LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE  168 (321)
T ss_dssp             EEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCTTCEE
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCcccee
Confidence            9999999999999998888899999999999999999999998   999999999999999888    799999999987


Q ss_pred             ccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHh
Q 003836          652 LTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEAL  731 (792)
Q Consensus       652 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  731 (792)
                      .....  ......||+.|+|||.+.+..++.++||||||+++|||++|+.||........   +...     ....    
T Consensus       169 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~i-----~~~~----  234 (321)
T 2a2a_A          169 IEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET---LANI-----TSVS----  234 (321)
T ss_dssp             CCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH---HHHH-----HTTC----
T ss_pred             cCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHH---HHHH-----Hhcc----
Confidence            65332  22345689999999999999999999999999999999999999975432211   0000     0000    


Q ss_pred             hhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          732 VENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       732 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                        ...........+..+.+++.+||+.||++|||++|+++
T Consensus       235 --~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~  272 (321)
T 2a2a_A          235 --YDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR  272 (321)
T ss_dssp             --CCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred             --cccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence              00000000123456889999999999999999999998

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=3.6e-38  Score=338.46  Aligned_cols=259  Identities=22%  Similarity=0.338  Sum_probs=190.4

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +.+.+.||+|+||+||+|.. ..+++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus         7 y~~~~~lg~G~~g~V~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~   85 (317)
T 2pmi_A            7 FKQLEKLGNGTYATVYKGLN-KTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFM   85 (317)
T ss_dssp             ------------CEEEEEEC-SSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECC
T ss_pred             eeEeeEECCCCCEEEEEEEE-CCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEec
Confidence            34567899999999999965 3457899999987543 234578899999999999999999999999999999999999


Q ss_pred             cCCCccccccCC------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCC
Q 003836          582 SNGTVASFLFGD------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD  655 (792)
Q Consensus       582 ~~gsL~~~l~~~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~  655 (792)
                      + |+|.+++...      ..+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus        86 ~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  161 (317)
T 2pmi_A           86 D-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP  161 (317)
T ss_dssp             C-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETTSC
T ss_pred             C-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecCCC
Confidence            8 5999888543      3578999999999999999999998   9999999999999999999999999999876432


Q ss_pred             CCCccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHH----hhc------
Q 003836          656 QSHTNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYD----RYQ------  724 (792)
Q Consensus       656 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~----~~~------  724 (792)
                      .. ......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||...........+......    .+.      
T Consensus       162 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  240 (317)
T 2pmi_A          162 VN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLP  240 (317)
T ss_dssp             CC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCT
T ss_pred             cc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhh
Confidence            22 2234468999999999876 46899999999999999999999999765432211111110000    000      


Q ss_pred             ----------ccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          725 ----------ERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       725 ----------~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                                ...+...+.+    ........++.+++.+||+.||++|||++|+++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          241 KYNPNIQQRPPRDLRQVLQP----HTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH  293 (317)
T ss_dssp             TCCTTCCCCCCCCSHHHHGG----GCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hcccccccccchhHHHhhcc----cccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence                      0000111111    111123457899999999999999999999987

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=1.4e-38  Score=338.38  Aligned_cols=255  Identities=25%  Similarity=0.412  Sum_probs=199.3

Q ss_pred             hhhhhcCccccceEEEeeecCC--CceEEEEEEcccccc-cchHHHHHHHHHhcccCCCCcccccceec-cCCceEEEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMG--SSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLLGYCD-EGQNRLLVYE  579 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~--~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~g~~~-~~~~~~lV~E  579 (792)
                      .+.+.||+|+||+||+|.....  ....+|+|++..... ...+.+.+|+.++++++||||+++++++. .++..++|||
T Consensus        28 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e  107 (298)
T 3f66_A           28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP  107 (298)
T ss_dssp             EEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEE
T ss_pred             hhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEe
Confidence            3457899999999999976432  334689999876433 34567999999999999999999999864 5567899999


Q ss_pred             eccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC-
Q 003836          580 FMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS-  657 (792)
Q Consensus       580 ~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~-  657 (792)
                      |+++|+|.+++... ..+++..+..++.|++.||+|||+.   +|+||||||+|||+++++.+||+|||+++....... 
T Consensus       108 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~  184 (298)
T 3f66_A          108 YMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY  184 (298)
T ss_dssp             CCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGC
T ss_pred             CCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccccccchh
Confidence            99999999999764 5688999999999999999999998   999999999999999999999999999987644322 


Q ss_pred             --CccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcC-CCcchhhhhhhhHHHHHHHhhcccchhHhhhc
Q 003836          658 --HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRN-IDNEISKVDKAILTDWAYDRYQERTLEALVEN  734 (792)
Q Consensus       658 --~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  734 (792)
                        .......+|+.|+|||.+.+..++.++||||||+++|||++|+.| |.........                 ..+..
T Consensus       185 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~-----------------~~~~~  247 (298)
T 3f66_A          185 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-----------------VYLLQ  247 (298)
T ss_dssp             BC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHH-----------------HHHHT
T ss_pred             ccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHH-----------------HHHhc
Confidence              122334578899999999999999999999999999999996554 4332211100                 00011


Q ss_pred             hhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          735 DLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       735 ~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                      ......+...+..+.+++.+||+.+|++|||++|++++|+.+..
T Consensus       248 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~  291 (298)
T 3f66_A          248 GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS  291 (298)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            11111122334678899999999999999999999999998754

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=5.6e-38  Score=329.67  Aligned_cols=250  Identities=27%  Similarity=0.376  Sum_probs=203.0

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +.+.+.||+|+||.||++... .+++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus         9 y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   87 (276)
T 2yex_A            9 WDLVQTLGEGAYGEVQLAVNR-VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC   87 (276)
T ss_dssp             EEEEEEEEECSSSEEEEEEET-TTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             eEEEEEeecCCCcEEEEEEEC-CCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEec
Confidence            445678999999999999754 456799999986533 334578999999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC-Ccc
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS-HTN  660 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~-~~~  660 (792)
                      ++++|.+++.....+++..+..++.||+.||.|||+.   +|+|+||||+||+++.++.+||+|||++........ ...
T Consensus        88 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  164 (276)
T 2yex_A           88 SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLL  164 (276)
T ss_dssp             TTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCB
T ss_pred             CCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcc
Confidence            9999999998888899999999999999999999998   999999999999999999999999999987643322 223


Q ss_pred             ccccccCCcccccccccCCC-CcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          661 TAIRGTKGYVAPEWFRNMPI-TVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~-~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      ....|++.|+|||.+.+..+ +.++||||||+++|||++|+.||........  ....+     ....        ....
T Consensus       165 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~-----~~~~--------~~~~  229 (276)
T 2yex_A          165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ--EYSDW-----KEKK--------TYLN  229 (276)
T ss_dssp             CCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH--HHHHH-----HTTC--------TTST
T ss_pred             cCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH--HHHHh-----hhcc--------cccC
Confidence            34568999999999987665 7899999999999999999999975432211  01111     0000        0000


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .....+..+.+++.+||+.||++|||++|+++
T Consensus       230 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          230 PWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             chhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence            11123457788999999999999999999987

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=8.6e-39  Score=344.76  Aligned_cols=254  Identities=24%  Similarity=0.358  Sum_probs=198.3

Q ss_pred             hhhhhcCccccceEEEeeecCCCc---eEEEEEEcccc-cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSS---NHVAVKKLNSV-FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~---~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      .+.+.||+|+||+||+|.......   ..|++|.+... .....+.+.+|+.++++++||||+++++++.... .++|+|
T Consensus        18 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~   96 (327)
T 3lzb_A           18 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQ   96 (327)
T ss_dssp             EEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEEC
T ss_pred             eEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEE
Confidence            445789999999999997643222   24688877543 3445678999999999999999999999998765 789999


Q ss_pred             eccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          580 FMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       580 ~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      |+++|+|.+++... ..+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++........
T Consensus        97 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~  173 (327)
T 3lzb_A           97 LMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE  173 (327)
T ss_dssp             CCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC----------
T ss_pred             ecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEccCcccc
Confidence            99999999999764 5689999999999999999999999   9999999999999999999999999999876543322


Q ss_pred             -ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          659 -TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       659 -~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                       ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.......                 +...+....
T Consensus       174 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~-----------------~~~~~~~~~  236 (327)
T 3lzb_A          174 YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-----------------ISSILEKGE  236 (327)
T ss_dssp             ------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-----------------HHHHHHTTC
T ss_pred             ccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH-----------------HHHHHHcCC
Confidence             2223456888999999999999999999999999999999 999996543221                 111122222


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                      ....+...+..+.+++.+||+.||.+||+++|+++.|+.+..
T Consensus       237 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  278 (327)
T 3lzb_A          237 RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred             CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            222233455678899999999999999999999999988754

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=2e-38  Score=342.88  Aligned_cols=241  Identities=22%  Similarity=0.307  Sum_probs=201.2

Q ss_pred             HhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccc--------cchHHHHHHHHHhcccCCCCcccccceeccCCc
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ--------DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQN  573 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~--------~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~  573 (792)
                      .+.+.+.||+|+||+||+|... .+++.||||++.....        ...+.+.+|+.++++++||||+++++++.+.+.
T Consensus        25 ~y~~~~~lG~G~~g~Vy~a~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~  103 (335)
T 3dls_A           25 KYSTMSPLGSGAFGFVWTAVDK-EKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGF  103 (335)
T ss_dssp             HEEEEEECSSSSSCSEEEEEET-TTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             ceEEEeEEEecCCEEEEEEEEC-CCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCE
Confidence            3445578999999999999653 5578999999876421        133467889999999999999999999999999


Q ss_pred             eEEEEEeccCC-CccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccc
Q 003836          574 RLLVYEFMSNG-TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLL  652 (792)
Q Consensus       574 ~~lV~E~~~~g-sL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~  652 (792)
                      .++||||+.+| +|.+++.....+++..+..|+.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++..
T Consensus       104 ~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~  180 (335)
T 3dls_A          104 FQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYL  180 (335)
T ss_dssp             EEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecccceEC
Confidence            99999999877 9999998888899999999999999999999999   9999999999999999999999999999876


Q ss_pred             cCCCCCccccccccCCcccccccccCCC-CcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHh
Q 003836          653 TLDQSHTNTAIRGTKGYVAPEWFRNMPI-TVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEAL  731 (792)
Q Consensus       653 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  731 (792)
                      ....  ......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||........                    
T Consensus       181 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--------------------  238 (335)
T 3dls_A          181 ERGK--LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVE--------------------  238 (335)
T ss_dssp             CTTC--CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGTT--------------------
T ss_pred             CCCC--ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHHh--------------------
Confidence            5332  2234568999999999988776 8899999999999999999999965321100                    


Q ss_pred             hhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          732 VENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       732 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                        ...  ..+...+.++.+++.+||+.||++|||++|+++.
T Consensus       239 --~~~--~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          239 --AAI--HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             --TCC--CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             --hcc--CCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence              000  0111234578899999999999999999999985

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.4e-38  Score=368.99  Aligned_cols=248  Identities=27%  Similarity=0.376  Sum_probs=201.1

Q ss_pred             hcCccccceEEEeeecC-CCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCCC
Q 003836          508 ELGRGAFGTVYKGFVNM-GSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGT  585 (792)
Q Consensus       508 ~lG~G~~g~Vy~g~~~~-~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~gs  585 (792)
                      +||+|+||.||+|.+.. ..+..||||+++... ....+++.+|++++++++|||||+++++|.. +..++||||+++|+
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~  421 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP  421 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence            69999999999997653 345689999998643 3356789999999999999999999999976 56899999999999


Q ss_pred             ccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc--cc
Q 003836          586 VASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN--TA  662 (792)
Q Consensus       586 L~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~--~~  662 (792)
                      |.+++... ..+++..+..|+.||+.||+|||++   +|+||||||+||||++++.+||+|||+++..........  ..
T Consensus       422 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~  498 (613)
T 2ozo_A          422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA  498 (613)
T ss_dssp             HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----------
T ss_pred             HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccC
Confidence            99999765 5689999999999999999999998   999999999999999999999999999987654332221  22


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCC
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN  741 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  741 (792)
                      ..+++.|+|||++.+..++.++|||||||++|||++ |+.||.......                 +...+........+
T Consensus       499 ~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~-----------------~~~~i~~~~~~~~p  561 (613)
T 2ozo_A          499 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE-----------------VMAFIEQGKRMECP  561 (613)
T ss_dssp             ---CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH-----------------HHHHHHTTCCCCCC
T ss_pred             CCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH-----------------HHHHHHcCCCCCCC
Confidence            345689999999999999999999999999999998 999997543221                 11111122222334


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          742 VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       742 ~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                      ...+.++.+++.+||+.+|++||++++|++.|+.+
T Consensus       562 ~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~  596 (613)
T 2ozo_A          562 PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  596 (613)
T ss_dssp             TTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred             CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            45567889999999999999999999999999875

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=2.1e-38  Score=339.21  Aligned_cols=264  Identities=22%  Similarity=0.263  Sum_probs=198.4

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccc--cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ--DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .+.+.||+|+||+||++... .+++.||+|++.....  ...+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus         6 ~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (311)
T 4agu_A            6 EKIGKIGEGSYGVVFKCRNR-DTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYC   84 (311)
T ss_dssp             EEEEEEEECSSEEEEEEEET-TTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             eEeeEEeecCCeEEEEEEeC-CCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeC
Confidence            34578999999999999754 4567999999865432  23467889999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      ++++|.+++.....+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++....... ...
T Consensus        85 ~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~  160 (311)
T 4agu_A           85 DHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD-YYD  160 (311)
T ss_dssp             SEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC--------
T ss_pred             CCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc-ccC
Confidence            9999999998878899999999999999999999999   999999999999999999999999999987653322 223


Q ss_pred             cccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHH-------HHhhcccc-hhHhh
Q 003836          662 AIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWA-------YDRYQERT-LEALV  732 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~-~~~~~  732 (792)
                      ...||+.|+|||.+.+ ..++.++||||||+++|||++|+.||................       ...+.... .....
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (311)
T 4agu_A          161 DEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK  240 (311)
T ss_dssp             -----GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCC
T ss_pred             CCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCc
Confidence            4468999999999876 678999999999999999999999997654332211111000       00000000 00000


Q ss_pred             hchhcccC-----CHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          733 ENDLEAMN-----NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       733 ~~~~~~~~-----~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .+......     ....+..+.+++.+||+.||++|||++|+++.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  285 (311)
T 4agu_A          241 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH  285 (311)
T ss_dssp             CCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred             CCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence            00000000     01245668899999999999999999999974

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=5.6e-39  Score=344.35  Aligned_cols=256  Identities=25%  Similarity=0.366  Sum_probs=205.6

Q ss_pred             hhhhhhcCccccceEEEeeec----CCCceEEEEEEcccccc-cchHHHHHHHHHhccc-CCCCcccccceeccCC-ceE
Q 003836          503 RGFKEELGRGAFGTVYKGFVN----MGSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQ-NRL  575 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~----~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~-~~~  575 (792)
                      +.+.+.||+|+||+||+|...    ..+++.||||++..... ...+.+.+|++++.++ +||||+++++++.+.+ ..+
T Consensus        29 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~  108 (316)
T 2xir_A           29 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM  108 (316)
T ss_dssp             EEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCE
T ss_pred             eeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceE
Confidence            345578999999999999752    34568999999976433 3346789999999999 7999999999987655 589


Q ss_pred             EEEEeccCCCccccccCCCC----------------CchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCC
Q 003836          576 LVYEFMSNGTVASFLFGDSK----------------PNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY  639 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~~~----------------l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~  639 (792)
                      +||||+++|+|.+++.....                +++..+..++.||+.||.|||+.   +|+||||||+|||++.++
T Consensus       109 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~  185 (316)
T 2xir_A          109 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKN  185 (316)
T ss_dssp             EEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGG
T ss_pred             EEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCC
Confidence            99999999999999976543                78999999999999999999998   999999999999999999


Q ss_pred             CeEEeecCCCccccCCCCC-ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHH
Q 003836          640 NARISDFGLAKLLTLDQSH-TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTD  717 (792)
Q Consensus       640 ~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~  717 (792)
                      .+||+|||+++........ ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||........  ..  
T Consensus       186 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~--~~--  261 (316)
T 2xir_A          186 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--FC--  261 (316)
T ss_dssp             CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH--HH--
T ss_pred             CEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHH--HH--
Confidence            9999999999876543332 2234567889999999999999999999999999999998 9999865432111  00  


Q ss_pred             HHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          718 WAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                                  ..+........+...+..+.+++.+||+.||.+|||++|+++.|+.++
T Consensus       262 ------------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  309 (316)
T 2xir_A          262 ------------RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  309 (316)
T ss_dssp             ------------HHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ------------HHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence                        001111111122234567889999999999999999999999998765

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=1.6e-38  Score=341.95  Aligned_cols=256  Identities=24%  Similarity=0.384  Sum_probs=206.1

Q ss_pred             hhhhhhcCccccceEEEeeecC----CCceEEEEEEcccccc-cchHHHHHHHHHhcccCCCCcccccceeccCCceEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNM----GSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLV  577 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~----~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV  577 (792)
                      +.+.+.||+|+||.||+|....    ..++.||+|++..... .....+.+|++++++++||||+++++++.+.+..++|
T Consensus        27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv  106 (322)
T 1p4o_A           27 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI  106 (322)
T ss_dssp             EEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEE
T ss_pred             eeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEE
Confidence            4456789999999999997542    3457899999975433 3345789999999999999999999999999999999


Q ss_pred             EEeccCCCccccccCC----------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecC
Q 003836          578 YEFMSNGTVASFLFGD----------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFG  647 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~----------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg  647 (792)
                      |||+++|+|.+++...          ..+++..+..++.||+.||.|||++   +|+||||||+|||++.++.+||+|||
T Consensus       107 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~kl~Dfg  183 (322)
T 1p4o_A          107 MELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG  183 (322)
T ss_dssp             EECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEECCTT
T ss_pred             EEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeEEECcCc
Confidence            9999999999998642          3468899999999999999999999   99999999999999999999999999


Q ss_pred             CCccccCCCCC-ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcc
Q 003836          648 LAKLLTLDQSH-TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQE  725 (792)
Q Consensus       648 ~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~  725 (792)
                      +++........ ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.........        .    
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~--------~----  251 (322)
T 1p4o_A          184 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL--------R----  251 (322)
T ss_dssp             CCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHH--------H----
T ss_pred             cccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHH--------H----
Confidence            99866433221 1223456889999999999999999999999999999999 78888654221100        0    


Q ss_pred             cchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          726 RTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       726 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                          .+... .....+...+..+.+++.+||+.||++|||+.|+++.|+++++
T Consensus       252 ----~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~  299 (322)
T 1p4o_A          252 ----FVMEG-GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  299 (322)
T ss_dssp             ----HHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             ----HHHcC-CcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence                00000 0111223345678899999999999999999999999988654

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=1.4e-38  Score=337.24  Aligned_cols=252  Identities=28%  Similarity=0.390  Sum_probs=203.6

Q ss_pred             hhh-hcCccccceEEEeeec-CCCceEEEEEEcccccc--cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          505 FKE-ELGRGAFGTVYKGFVN-MGSSNHVAVKKLNSVFQ--DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       505 ~~~-~lG~G~~g~Vy~g~~~-~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      +.+ .||+|+||+||+|... ...++.||||++.....  ...+++.+|++++++++||||+++++++ +.+..++||||
T Consensus        20 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~   98 (291)
T 1xbb_A           20 LEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEM   98 (291)
T ss_dssp             EEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEEC
T ss_pred             hccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEe
Confidence            344 8999999999999653 34467899999975432  2357899999999999999999999999 56778999999


Q ss_pred             ccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc-
Q 003836          581 MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT-  659 (792)
Q Consensus       581 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~-  659 (792)
                      +++++|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++......... 
T Consensus        99 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  175 (291)
T 1xbb_A           99 AELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK  175 (291)
T ss_dssp             CTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEE
T ss_pred             CCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCccc
Confidence            99999999998888899999999999999999999999   99999999999999999999999999998765443322 


Q ss_pred             -cccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhc
Q 003836          660 -NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLE  737 (792)
Q Consensus       660 -~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  737 (792)
                       .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||........                 ...+.....
T Consensus       176 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-----------------~~~~~~~~~  238 (291)
T 1xbb_A          176 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-----------------TAMLEKGER  238 (291)
T ss_dssp             C----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH-----------------HHHHHTTCC
T ss_pred             ccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHH-----------------HHHHHcCCC
Confidence             122346788999999998889999999999999999999 9999975432110                 011111111


Q ss_pred             ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          738 AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       738 ~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      ...+...+..+.+++.+||+.||++||++.++++.|+++.
T Consensus       239 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  278 (291)
T 1xbb_A          239 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY  278 (291)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            2223345677899999999999999999999999998764

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=7.9e-39  Score=338.86  Aligned_cols=257  Identities=28%  Similarity=0.435  Sum_probs=192.5

Q ss_pred             HHhhhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEE
Q 003836          501 VTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       501 ~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~  578 (792)
                      ..+.+.+.||+|+||+||+|+..    ..+|+|+++...  ....+.+.+|++++++++|+||+++++++ .....++||
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~~~~~----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~   98 (289)
T 3og7_A           24 GQITVGQRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT   98 (289)
T ss_dssp             TSCEEEEEEEECSSEEEEEEESS----SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred             cceeeeeEecCCCCeEEEEEEEc----CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence            34456688999999999999753    359999987543  33456799999999999999999999966 455689999


Q ss_pred             EeccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC-
Q 003836          579 EFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ-  656 (792)
Q Consensus       579 E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~-  656 (792)
                      ||+++++|.+++... ..+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++...... 
T Consensus        99 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  175 (289)
T 3og7_A           99 QWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG  175 (289)
T ss_dssp             ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC----------
T ss_pred             EecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccccc
Confidence            999999999999654 5689999999999999999999998   99999999999999999999999999998654322 


Q ss_pred             CCccccccccCCcccccccc---cCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhh
Q 003836          657 SHTNTAIRGTKGYVAPEWFR---NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVE  733 (792)
Q Consensus       657 ~~~~~~~~gt~~y~aPE~~~---~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  733 (792)
                      ........||+.|+|||.+.   +..++.++||||||+++|||++|+.||.........   ......    ...    .
T Consensus       176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~---~~~~~~----~~~----~  244 (289)
T 3og7_A          176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI---IEMVGR----GSL----S  244 (289)
T ss_dssp             --------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHH---HHHHHH----TSC----C
T ss_pred             cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHH---HHHhcc----ccc----C
Confidence            22233456899999999986   567899999999999999999999999754322110   000000    000    0


Q ss_pred             chhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          734 NDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       734 ~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      +.. .......+..+.+++.+||+.+|++|||++|++++|+++.
T Consensus       245 ~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~  287 (289)
T 3og7_A          245 PDL-SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA  287 (289)
T ss_dssp             CCT-TSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             cch-hhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence            000 0112234567899999999999999999999999999875

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=2.1e-38  Score=350.48  Aligned_cols=266  Identities=16%  Similarity=0.158  Sum_probs=200.5

Q ss_pred             hhhhhhcCcc--ccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEE
Q 003836          503 RGFKEELGRG--AFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       503 ~~~~~~lG~G--~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~  578 (792)
                      +.+.++||+|  +||+||++... .+++.||||++....  ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus        27 y~~~~~lG~G~~~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~  105 (389)
T 3gni_B           27 YELLTVIGKGFEDLMTVNLARYK-PTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVT  105 (389)
T ss_dssp             EEEEEEEEEETTTTEEEEEEEET-TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             EEEEecccCCcCCceEEEEEEEc-CCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEE
Confidence            4456789999  99999999754 457899999997543  333467889999999999999999999999999999999


Q ss_pred             EeccCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC
Q 003836          579 EFMSNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       579 E~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~  656 (792)
                      ||+++|+|.+++...  ..+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||.+.......
T Consensus       106 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~  182 (389)
T 3gni_B          106 SFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHG  182 (389)
T ss_dssp             ECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECEETT
T ss_pred             EccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeecccc
Confidence            999999999999765  6789999999999999999999999   99999999999999999999999999987543221


Q ss_pred             C------CccccccccCCccccccccc--CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhh-----
Q 003836          657 S------HTNTAIRGTKGYVAPEWFRN--MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRY-----  723 (792)
Q Consensus       657 ~------~~~~~~~gt~~y~aPE~~~~--~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-----  723 (792)
                      .      .......||+.|+|||.+.+  ..++.++|||||||++|||++|+.||....................     
T Consensus       183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  262 (389)
T 3gni_B          183 QRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTST  262 (389)
T ss_dssp             EECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-------------
T ss_pred             ccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccc
Confidence            1      11223468999999999987  6799999999999999999999999965432211100000000000     


Q ss_pred             -cc-------------cchhHhhh---------chhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          724 -QE-------------RTLEALVE---------NDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       724 -~~-------------~~~~~~~~---------~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                       ..             ........         ...........+..+.+|+.+||+.||++|||++|+++.
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h  334 (389)
T 3gni_B          263 IPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH  334 (389)
T ss_dssp             -------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred             cccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence             00             00000000         000001123345678999999999999999999999865

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=2.7e-38  Score=337.97  Aligned_cols=264  Identities=23%  Similarity=0.273  Sum_probs=198.3

Q ss_pred             HHHhhhhhhcCccccceEEEeeecCCCceEEEEEEccccc-----ccchHHHHHHHHHhcccC---CCCcccccceeccC
Q 003836          500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-----QDSEKEFKAEVNGIGQTH---HKNLVRLLGYCDEG  571 (792)
Q Consensus       500 ~~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-----~~~~~~~~~Ei~~l~~l~---h~niv~l~g~~~~~  571 (792)
                      ...+.+.+.||+|+||+||+|.. ..+++.||||++....     ......+.+|+.++++++   ||||+++++++...
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            8 TSRYEPVAEIGVGAYGTVYKARD-PHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             --CCEEEEEECCSSSCCEEEEEC-TTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             ccceEEEEEEecCCCeEEEEEEE-CCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            34455678899999999999974 3457899999987432     122456778888877775   99999999999765


Q ss_pred             C-----ceEEEEEeccCCCccccccCCCC--CchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEe
Q 003836          572 Q-----NRLLVYEFMSNGTVASFLFGDSK--PNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARIS  644 (792)
Q Consensus       572 ~-----~~~lV~E~~~~gsL~~~l~~~~~--l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~  644 (792)
                      .     ..++||||++ ++|.+++.....  +++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~  162 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLA  162 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEEC
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEe
Confidence            5     4789999997 599999977643  89999999999999999999999   99999999999999999999999


Q ss_pred             ecCCCccccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhc
Q 003836          645 DFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQ  724 (792)
Q Consensus       645 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~  724 (792)
                      |||+++.....  .......||+.|+|||.+.+..++.++|||||||++|||++|+.||...........+.... ....
T Consensus       163 Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~-~~~~  239 (308)
T 3g33_A          163 DFGLARIYSYQ--MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI-GLPP  239 (308)
T ss_dssp             SCSCTTTSTTC--CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHH-CCCC
T ss_pred             eCccccccCCC--cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh-CCCC
Confidence            99999866432  22345678999999999999999999999999999999999999997654322111111000 0000


Q ss_pred             ccchh---Hhhhchhc-------ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          725 ERTLE---ALVENDLE-------AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       725 ~~~~~---~~~~~~~~-------~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      +....   .+......       .....+....+.+++.+||+.||++|||+.|+++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          240 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             TTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence            00000   00000000       0001124467889999999999999999999997

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=2.2e-38  Score=339.41  Aligned_cols=255  Identities=25%  Similarity=0.370  Sum_probs=194.2

Q ss_pred             hhhhhhcCccccceEEEeeecCC--CceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCC-----c
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMG--SSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQ-----N  573 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~--~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~-----~  573 (792)
                      +.+.+.||+|+||.||+|.....  .++.||+|++....  ....+.+.+|+.++++++||||+++++++.+..     .
T Consensus        36 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  115 (313)
T 3brb_A           36 LILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPK  115 (313)
T ss_dssp             EEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------C
T ss_pred             eeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcc
Confidence            33457899999999999976542  45689999987542  233467999999999999999999999997765     3


Q ss_pred             eEEEEEeccCCCcccccc------CCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecC
Q 003836          574 RLLVYEFMSNGTVASFLF------GDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFG  647 (792)
Q Consensus       574 ~~lV~E~~~~gsL~~~l~------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg  647 (792)
                      .++||||+++|+|.+++.      ....+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||
T Consensus       116 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl~Dfg  192 (313)
T 3brb_A          116 PMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFG  192 (313)
T ss_dssp             EEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEECSCS
T ss_pred             cEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEEeecC
Confidence            599999999999999983      335689999999999999999999998   99999999999999999999999999


Q ss_pred             CCccccCCCC-CccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcc
Q 003836          648 LAKLLTLDQS-HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQE  725 (792)
Q Consensus       648 ~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~  725 (792)
                      +++....... .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||.........             
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~-------------  259 (313)
T 3brb_A          193 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMY-------------  259 (313)
T ss_dssp             CC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH-------------
T ss_pred             cceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHH-------------
Confidence            9987644332 22233457889999999999999999999999999999999 88888654322110             


Q ss_pred             cchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          726 RTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       726 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                          ..+........+...+..+.+++.+||+.+|.+|||++++++.|+.++
T Consensus       260 ----~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~  307 (313)
T 3brb_A          260 ----DYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL  307 (313)
T ss_dssp             ----HHHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ----HHHHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence                000011111222344567899999999999999999999999998864

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=5.6e-39  Score=346.22  Aligned_cols=271  Identities=23%  Similarity=0.363  Sum_probs=210.3

Q ss_pred             hhhhhhcCccccceEEEeee---cCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCC--ceEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFV---NMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQ--NRLLV  577 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~---~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~--~~~lV  577 (792)
                      +.+.+.||+|+||.||++..   +..+++.||||++........+.+.+|++++++++||||+++++++...+  ..++|
T Consensus        43 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv  122 (326)
T 2w1i_A           43 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLI  122 (326)
T ss_dssp             EEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEE
T ss_pred             ceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEE
Confidence            34567899999999999975   34567899999998766666788999999999999999999999987654  78999


Q ss_pred             EEeccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC
Q 003836          578 YEFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~  656 (792)
                      |||+++++|.+++... ..+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++......
T Consensus       123 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~  199 (326)
T 2w1i_A          123 MEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK  199 (326)
T ss_dssp             ECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCSSC
T ss_pred             EECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhccccc
Confidence            9999999999999765 4689999999999999999999998   99999999999999999999999999998765443


Q ss_pred             CCc--cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhc
Q 003836          657 SHT--NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEN  734 (792)
Q Consensus       657 ~~~--~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  734 (792)
                      ...  .....++..|+|||.+.+..++.++||||||+++|||++|+.|+............ ...........+...+..
T Consensus       200 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  278 (326)
T 2w1i_A          200 EYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG-NDKQGQMIVFHLIELLKN  278 (326)
T ss_dssp             SEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHC-TTCCTHHHHHHHHHHHHT
T ss_pred             cccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhc-cccchhhhHHHHHHHhhc
Confidence            211  22345677899999999888999999999999999999999887543211100000 000000000011122222


Q ss_pred             hhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          735 DLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       735 ~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      ......+...+.++.+++.+||+.||++|||+.||++.|+.+.
T Consensus       279 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~  321 (326)
T 2w1i_A          279 NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR  321 (326)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            2222233445678899999999999999999999999998754

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=2.4e-38  Score=334.94  Aligned_cols=260  Identities=19%  Similarity=0.264  Sum_probs=195.7

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .+.+.||+|+||+||++..  ..++.+|+|++....  ....+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus         5 ~~~~~lg~G~~g~V~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   82 (288)
T 1ob3_A            5 HGLEKIGEGTYGVVYKAQN--NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHL   82 (288)
T ss_dssp             EEEEEEEEETTEEEEEEEE--TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECC
T ss_pred             hhhhhcccCCCEEEEEEEc--CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEec
Confidence            3457899999999999976  346789999986543  223478899999999999999999999999999999999999


Q ss_pred             cCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          582 SNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       582 ~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      ++ +|.+++... ..+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++....... ..
T Consensus        83 ~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~  157 (288)
T 1ob3_A           83 DQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR-KY  157 (288)
T ss_dssp             SE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred             CC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcccc-cc
Confidence            86 898888654 6789999999999999999999998   999999999999999999999999999987543221 22


Q ss_pred             ccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccc---hhHh--hhc
Q 003836          661 TAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERT---LEAL--VEN  734 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~  734 (792)
                      ....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||................ .......   ....  .++
T Consensus       158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  236 (288)
T 1ob3_A          158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRIL-GTPNSKNWPNVTELPKYDP  236 (288)
T ss_dssp             ----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH-CCCCTTTSTTGGGSTTCCT
T ss_pred             ccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH-CCCChhhchhhhccccccc
Confidence            33468999999999876 458999999999999999999999997653321111110000 0000000   0000  000


Q ss_pred             hhc-------ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          735 DLE-------AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       735 ~~~-------~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ...       .........++.+++.+||+.||++|||++|+++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          237 NFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             TCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            000       0011124567889999999999999999999987

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=3.1e-38  Score=343.05  Aligned_cols=251  Identities=25%  Similarity=0.261  Sum_probs=196.0

Q ss_pred             HhhhhhhcCccccceEEEeeecCCCceEEEEEEcccc-----cccchHHHHHHHHHhcccCCCCcccccceeccCCceEE
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-----FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLL  576 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~-----~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~l  576 (792)
                      .+.+.+.||+|+||+||++... .+++.+|+|++...     .....+.+.+|++++++++||||+++++++.+.+..++
T Consensus        27 ~y~~~~~lG~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  105 (345)
T 3hko_A           27 KYHLKGAIGQGSYGVVRVAIEN-QTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICL  105 (345)
T ss_dssp             HEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             heeecceeeecCCeEEEEEEEC-CCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEE
Confidence            3455688999999999999754 55678999998643     23456789999999999999999999999999999999


Q ss_pred             EEEeccCCCccccccCC----------------------------------------CCCchhHHHHHHHHHHHHHHHHh
Q 003836          577 VYEFMSNGTVASFLFGD----------------------------------------SKPNWKLRTEIAMGIAGGLFYLH  616 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~----------------------------------------~~l~~~~~~~i~~~ia~gL~yLH  616 (792)
                      ||||+++|+|.+++...                                        ..+++..+..++.||+.||+|||
T Consensus       106 v~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH  185 (345)
T 3hko_A          106 VMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH  185 (345)
T ss_dssp             EEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence            99999999999988521                                        12356778889999999999999


Q ss_pred             hccCCCeEecCCCCCcEEEcCCC--CeEEeecCCCccccCCCC---CccccccccCCccccccccc--CCCCcccceehH
Q 003836          617 EECCTQIIHCDIKPQNILLDDHY--NARISDFGLAKLLTLDQS---HTNTAIRGTKGYVAPEWFRN--MPITVKVDVYSY  689 (792)
Q Consensus       617 ~~~~~~ivH~dikp~NILl~~~~--~~kl~Dfg~a~~~~~~~~---~~~~~~~gt~~y~aPE~~~~--~~~~~k~DV~S~  689 (792)
                      +.   +|+||||||+|||++.++  .+||+|||+++.......   .......||+.|+|||.+.+  ..++.++|||||
T Consensus       186 ~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diwsl  262 (345)
T 3hko_A          186 NQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSA  262 (345)
T ss_dssp             HT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHH
T ss_pred             HC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHH
Confidence            99   999999999999998776  899999999987643222   12344569999999999865  678999999999


Q ss_pred             HHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhc--ccCCHHHHHHHHHHHHHccccCCCCCCCHH
Q 003836          690 GVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLE--AMNNVTMLHRFVMVAFWCIQEDPSHRPTMR  767 (792)
Q Consensus       690 Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~  767 (792)
                      |+++|||++|+.||.........                ..+......  .......+..+.+++.+||+.+|.+||++.
T Consensus       263 G~il~el~~g~~pf~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~  326 (345)
T 3hko_A          263 GVLLHLLLMGAVPFPGVNDADTI----------------SQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAM  326 (345)
T ss_dssp             HHHHHHHHHSSCSSCCSSHHHHH----------------HHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHH
T ss_pred             HHHHHHHHHCCCCCCCCChHHHH----------------HHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHH
Confidence            99999999999999754332111                011111110  001112356788999999999999999999


Q ss_pred             hHHHH
Q 003836          768 KVTQM  772 (792)
Q Consensus       768 evl~~  772 (792)
                      |+++.
T Consensus       327 ~~l~h  331 (345)
T 3hko_A          327 RALQH  331 (345)
T ss_dssp             HHHHS
T ss_pred             HHhcC
Confidence            99873

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=7.3e-39  Score=346.33  Aligned_cols=256  Identities=28%  Similarity=0.406  Sum_probs=205.7

Q ss_pred             hhhhhhcCccccceEEEeeecCCC----ceEEEEEEcccccc-cchHHHHHHHHHhccc-CCCCcccccceeccCCceEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGS----SNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLL  576 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~----~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~l  576 (792)
                      +.+.+.||+|+||.||+|......    .+.||+|++..... ...+.+.+|+.+++++ +||||+++++++.+.+..++
T Consensus        48 ~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l  127 (333)
T 2i1m_A           48 LQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLV  127 (333)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             ceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEE
Confidence            445678999999999999764322    24799999976432 3456799999999999 89999999999999999999


Q ss_pred             EEEeccCCCccccccCC--------------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeE
Q 003836          577 VYEFMSNGTVASFLFGD--------------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNAR  642 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~--------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~k  642 (792)
                      ||||+++|+|.+++...              ..+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+|
T Consensus       128 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~k  204 (333)
T 2i1m_A          128 ITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAK  204 (333)
T ss_dssp             EEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGGGEEE
T ss_pred             EEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCCCeEE
Confidence            99999999999998642              3568899999999999999999998   999999999999999999999


Q ss_pred             EeecCCCccccCCCCC-ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHH
Q 003836          643 ISDFGLAKLLTLDQSH-TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAY  720 (792)
Q Consensus       643 l~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~  720 (792)
                      |+|||+++........ ......+|+.|+|||.+.+..++.++||||||+++|||++ |..||.........        
T Consensus       205 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~--------  276 (333)
T 2i1m_A          205 IGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF--------  276 (333)
T ss_dssp             BCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHH--------
T ss_pred             ECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHH--------
Confidence            9999999876443322 2233457889999999999899999999999999999999 88888654322110        


Q ss_pred             HhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          721 DRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                              ...+........+...+..+.+++.+||+.||.+|||++||++.|+.+.
T Consensus       277 --------~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~  325 (333)
T 2i1m_A          277 --------YKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA  325 (333)
T ss_dssp             --------HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             --------HHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence                    0111111111122233567889999999999999999999999998753

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=5.4e-38  Score=353.70  Aligned_cols=245  Identities=24%  Similarity=0.417  Sum_probs=203.2

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      .+.+.||+|+||.||+|... .+++.||||++....   ......+.+|+.++++++||||+++++++...+..++||||
T Consensus        19 ~l~~~LG~G~fg~V~~a~~~-~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~   97 (476)
T 2y94_A           19 ILGDTLGVGTFGKVKVGKHE-LTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEY   97 (476)
T ss_dssp             EEEEEEECCSSSCEEEEEET-TTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             EEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence            45578999999999999754 456899999987532   23356789999999999999999999999999999999999


Q ss_pred             ccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          581 MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       581 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +++|+|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++......  ..
T Consensus        98 ~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~--~~  172 (476)
T 2y94_A           98 VSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--FL  172 (476)
T ss_dssp             CSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC--CB
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccccc--cc
Confidence            99999999998888899999999999999999999998   99999999999999999999999999998764322  23


Q ss_pred             ccccccCCcccccccccCCC-CcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          661 TAIRGTKGYVAPEWFRNMPI-TVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~-~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      ....||+.|+|||.+.+..+ +.++|||||||++|||++|+.||........   .             ..+.+...  .
T Consensus       173 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~---~-------------~~i~~~~~--~  234 (476)
T 2y94_A          173 RTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTL---F-------------KKICDGIF--Y  234 (476)
T ss_dssp             CCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHH---H-------------HHHHTTCC--C
T ss_pred             cccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHH---H-------------HHHhcCCc--C
Confidence            34579999999999988765 7899999999999999999999975432110   0             01111111  1


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .+......+.+++.+||+.||++|||++|+++.
T Consensus       235 ~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h  267 (476)
T 2y94_A          235 TPQYLNPSVISLLKHMLQVDPMKRATIKDIREH  267 (476)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred             CCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence            122234578899999999999999999999973

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=2e-38  Score=340.15  Aligned_cols=259  Identities=22%  Similarity=0.251  Sum_probs=196.4

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEEEeccCCC
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYEFMSNGT  585 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~E~~~~gs  585 (792)
                      +.||+|+||+||++.. ..+++.||||++........+.+.+|++++.++ +||||+++++++.+.+..++||||+++|+
T Consensus        19 ~~lg~G~~g~V~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   97 (316)
T 2ac3_A           19 DVLGEGAHARVQTCIN-LITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS   97 (316)
T ss_dssp             CCCCCCSSEEEEEEEC-SSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred             ceecCCceEEEEEEEE-cCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCc
Confidence            5699999999999964 345679999999876666678899999999885 79999999999999999999999999999


Q ss_pred             ccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCC---eEEeecCCCccccCCCC-----
Q 003836          586 VASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYN---ARISDFGLAKLLTLDQS-----  657 (792)
Q Consensus       586 L~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~---~kl~Dfg~a~~~~~~~~-----  657 (792)
                      |.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.   +||+|||+++.......     
T Consensus        98 L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  174 (316)
T 2ac3_A           98 ILSHIHKRRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIS  174 (316)
T ss_dssp             HHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC------------
T ss_pred             HHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcccccc
Confidence            999998878899999999999999999999999   9999999999999998776   99999999986543221     


Q ss_pred             -CccccccccCCccccccccc-----CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHh
Q 003836          658 -HTNTAIRGTKGYVAPEWFRN-----MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEAL  731 (792)
Q Consensus       658 -~~~~~~~gt~~y~aPE~~~~-----~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  731 (792)
                       .......||+.|+|||.+..     ..++.++|||||||++|||++|+.||.............. ............+
T Consensus       175 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~i  253 (316)
T 2ac3_A          175 TPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGE-ACPACQNMLFESI  253 (316)
T ss_dssp             -------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC-----CCHHHHHHHHHHH
T ss_pred             ccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccc-cchhHHHHHHHHH
Confidence             11223458999999999875     5688999999999999999999999975432110000000 0000000000111


Q ss_pred             hhchhcccCCH----HHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          732 VENDLEAMNNV----TMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       732 ~~~~~~~~~~~----~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .....  ..+.    ..+..+.+++.+||+.||++|||++|+++.
T Consensus       254 ~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  296 (316)
T 2ac3_A          254 QEGKY--EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH  296 (316)
T ss_dssp             HHCCC--CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             hccCc--ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence            11111  0111    234678899999999999999999999984

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=2.2e-38  Score=346.76  Aligned_cols=243  Identities=24%  Similarity=0.279  Sum_probs=191.6

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccc---cchHHHHHHHHH-hcccCCCCcccccceeccCCceEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ---DSEKEFKAEVNG-IGQTHHKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~---~~~~~~~~Ei~~-l~~l~h~niv~l~g~~~~~~~~~lV~  578 (792)
                      +.+.+.||+|+||.||++... .+++.+|+|++.+...   .....+.+|..+ ++.++||||+++++++.+.+..++||
T Consensus        40 y~~~~~lG~G~fg~V~~~~~~-~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~  118 (373)
T 2r5t_A           40 FHFLKVIGKGSFGKVLLARHK-AEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVL  118 (373)
T ss_dssp             EEEEEEEECCTTCEEEEEEET-TTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eEEEEEEeeCCCeEEEEEEEc-CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEE
Confidence            345678999999999999754 5578999999976432   234556777776 57789999999999999999999999


Q ss_pred             EeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          579 EFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       579 E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      ||+++|+|.+++.....+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++..... ..
T Consensus       119 E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~-~~  194 (373)
T 2r5t_A          119 DYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH-NS  194 (373)
T ss_dssp             ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC-CC
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccccC-CC
Confidence            9999999999998878889999999999999999999998   9999999999999999999999999999864322 22


Q ss_pred             ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          659 TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      ......||+.|+|||++.+..++.++|||||||++|||++|+.||.........                ..++....  
T Consensus       195 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~----------------~~i~~~~~--  256 (373)
T 2r5t_A          195 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMY----------------DNILNKPL--  256 (373)
T ss_dssp             CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHH----------------HHHHHSCC--
T ss_pred             ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHH----------------HHHHhccc--
Confidence            334567999999999999999999999999999999999999999754322110                11111111  


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHh
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRK  768 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~e  768 (792)
                      ..+...+..+.+++.+||+.||.+||++.+
T Consensus       257 ~~~~~~~~~~~~li~~lL~~dp~~R~~~~~  286 (373)
T 2r5t_A          257 QLKPNITNSARHLLEGLLQKDRTKRLGAKD  286 (373)
T ss_dssp             CCCSSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred             CCCCCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence            112234567889999999999999999853

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=2.1e-38  Score=344.18  Aligned_cols=248  Identities=21%  Similarity=0.320  Sum_probs=195.3

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCC--CCcccccceeccCCceEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHH--KNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h--~niv~l~g~~~~~~~~~lV~  578 (792)
                      +.+.+.||+|+||.||++...  +++.||||++....  ....+.+.+|+.++.+++|  +||+++++++.+....++||
T Consensus        11 y~i~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~   88 (343)
T 3dbq_A           11 YSILKQIGSGGSSKVFQVLNE--KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM   88 (343)
T ss_dssp             EEEEEEESCCSSEEEEEEECT--TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             EEEEEEEecCCCeEEEEEEeC--CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence            345678999999999999753  46789999986532  3334678999999999976  99999999999999999999


Q ss_pred             EeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          579 EFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       579 E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      | +.+++|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++ ++.+||+|||+++........
T Consensus        89 e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~  163 (343)
T 3dbq_A           89 E-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS  163 (343)
T ss_dssp             C-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC------
T ss_pred             e-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCccccc
Confidence            9 56889999998888899999999999999999999998   999999999999997 578999999999876543332


Q ss_pred             -ccccccccCCccccccccc-----------CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhccc
Q 003836          659 -TNTAIRGTKGYVAPEWFRN-----------MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQER  726 (792)
Q Consensus       659 -~~~~~~gt~~y~aPE~~~~-----------~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~  726 (792)
                       ......||+.|+|||.+.+           ..++.++|||||||++|||++|+.||........               
T Consensus       164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---------------  228 (343)
T 3dbq_A          164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---------------  228 (343)
T ss_dssp             ------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH---------------
T ss_pred             ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHH---------------
Confidence             2334579999999999864           6789999999999999999999999965332111               


Q ss_pred             chhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          727 TLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       727 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .+..+++.......+......+.+++.+||+.||.+|||+.|+++.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          229 KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  274 (343)
T ss_dssp             HHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence            1112222222222233334578899999999999999999999875

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=7.4e-38  Score=349.00  Aligned_cols=250  Identities=22%  Similarity=0.316  Sum_probs=189.7

Q ss_pred             HhhhhhhcCccccceEEEeeecCCCceEEEEEEccccc--------ccchHHHHHHHHHhcccCCCCcccccceeccCCc
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--------QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQN  573 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--------~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~  573 (792)
                      .+.+.+.||+|+||+||+|... .+++.||||++....        ......+.+|++++++++||||+++++++.. +.
T Consensus       136 ~y~~~~~LG~G~~g~V~~a~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~  213 (419)
T 3i6u_A          136 EYIMSKTLGSGACGEVKLAFER-KTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-ED  213 (419)
T ss_dssp             TEEEEEEEEECSSSEEEEEEET-TTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-SE
T ss_pred             cEEEEeEEeeCCCeEEEEEEEC-CCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-Cc
Confidence            4555688999999999999754 556899999987532        1122358899999999999999999999854 45


Q ss_pred             eEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC---CCeEEeecCCCc
Q 003836          574 RLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH---YNARISDFGLAK  650 (792)
Q Consensus       574 ~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~---~~~kl~Dfg~a~  650 (792)
                      .++||||+++|+|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.+   ..+||+|||+++
T Consensus       214 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~  290 (419)
T 3i6u_A          214 YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK  290 (419)
T ss_dssp             EEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred             eEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEeecccce
Confidence            799999999999999998888899999999999999999999998   99999999999999754   459999999998


Q ss_pred             cccCCCCCccccccccCCccccccccc---CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccc
Q 003836          651 LLTLDQSHTNTAIRGTKGYVAPEWFRN---MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERT  727 (792)
Q Consensus       651 ~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  727 (792)
                      .....  .......||+.|+|||++.+   ..++.++|||||||++|||++|+.||..........   ...    ....
T Consensus       291 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~---~~i----~~~~  361 (419)
T 3i6u_A          291 ILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK---DQI----TSGK  361 (419)
T ss_dssp             SCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHH---HHH----HTTC
T ss_pred             ecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHH---HHH----hcCC
Confidence            76432  22334679999999999853   678899999999999999999999997543221100   000    0000


Q ss_pred             hhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          728 LEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       728 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ..      .........+..+.+++.+||+.||++|||++|+++
T Consensus       362 ~~------~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          362 YN------FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             CC------CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CC------CCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence            00      000000123567889999999999999999999998

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=5.3e-38  Score=347.05  Aligned_cols=264  Identities=21%  Similarity=0.314  Sum_probs=188.3

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccC-CCCcccccceeccCC--ceEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTH-HKNLVRLLGYCDEGQ--NRLLV  577 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~-h~niv~l~g~~~~~~--~~~lV  577 (792)
                      +.+.+.||+|+||.||+|... .+++.||||++....  ....+.+.+|+.++.++. ||||+++++++...+  ..++|
T Consensus        11 y~~~~~lG~G~~g~V~~~~~~-~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv   89 (388)
T 3oz6_A           11 YELVKKLGKGAYGIVWKSIDR-RTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLV   89 (388)
T ss_dssp             EEEEEC-------CEEEEEET-TTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEE
T ss_pred             eEEEEEeeeCCCeEEEEEEEC-CCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEE
Confidence            445678999999999999654 557899999986532  334567889999999997 999999999996543  78999


Q ss_pred             EEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC-
Q 003836          578 YEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ-  656 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~-  656 (792)
                      |||++ ++|..++.. ..+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++...... 
T Consensus        90 ~e~~~-~~L~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  164 (388)
T 3oz6_A           90 FDYME-TDLHAVIRA-NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRR  164 (388)
T ss_dssp             EECCS-EEHHHHHHH-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCC
T ss_pred             ecccC-cCHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccccccccccc
Confidence            99998 589888865 4688999999999999999999998   99999999999999999999999999998754311 


Q ss_pred             -------------------CCccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHH
Q 003836          657 -------------------SHTNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILT  716 (792)
Q Consensus       657 -------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~  716 (792)
                                         ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........+.
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~  244 (388)
T 3oz6_A          165 VTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERII  244 (388)
T ss_dssp             CCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence                               112234579999999999876 679999999999999999999999997653322111110


Q ss_pred             HHH-------HHhhcccchhHhhhc----------hhc------------ccCCHHHHHHHHHHHHHccccCCCCCCCHH
Q 003836          717 DWA-------YDRYQERTLEALVEN----------DLE------------AMNNVTMLHRFVMVAFWCIQEDPSHRPTMR  767 (792)
Q Consensus       717 ~~~-------~~~~~~~~~~~~~~~----------~~~------------~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~  767 (792)
                      ...       ...........++..          ...            .........++.+|+.+||+.||++|||++
T Consensus       245 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~  324 (388)
T 3oz6_A          245 GVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISAN  324 (388)
T ss_dssp             HHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred             HhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHH
Confidence            000       000000000000000          000            000012346788999999999999999999


Q ss_pred             hHHHH
Q 003836          768 KVTQM  772 (792)
Q Consensus       768 evl~~  772 (792)
                      |+++.
T Consensus       325 e~l~H  329 (388)
T 3oz6_A          325 DALKH  329 (388)
T ss_dssp             HHTTS
T ss_pred             HHhCC
Confidence            99976

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=8.5e-38  Score=338.35  Aligned_cols=265  Identities=23%  Similarity=0.333  Sum_probs=198.5

Q ss_pred             HHHHHhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcc--cCCCCcccccceeccC----
Q 003836          498 LVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQ--THHKNLVRLLGYCDEG----  571 (792)
Q Consensus       498 l~~~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~--l~h~niv~l~g~~~~~----  571 (792)
                      .....+.+.+.||+|+||.||+|+..   ++.||||++...   ....+..|.+++..  ++||||+++++++.+.    
T Consensus        34 ~~~~~y~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~  107 (337)
T 3mdy_A           34 TIAKQIQMVKQIGKGRYGEVWMGKWR---GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSW  107 (337)
T ss_dssp             THHHHCEEEEEEEEETTEEEEEEEET---TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred             ccccceEEEeEeecCCCeEEEEEEEC---CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence            33445566789999999999999764   678999998643   23444555555544  5999999999999877    


Q ss_pred             CceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhcc-----CCCeEecCCCCCcEEEcCCCCeEEeec
Q 003836          572 QNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEEC-----CTQIIHCDIKPQNILLDDHYNARISDF  646 (792)
Q Consensus       572 ~~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivH~dikp~NILl~~~~~~kl~Df  646 (792)
                      ...++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+++     ..+|+||||||+|||++.++.+||+||
T Consensus       108 ~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Df  186 (337)
T 3mdy_A          108 TQLYLITDYHENGSLYDYLKS-TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADL  186 (337)
T ss_dssp             CEEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred             CceEEEEeccCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeC
Confidence            678999999999999999965 46899999999999999999999862     238999999999999999999999999


Q ss_pred             CCCccccCCCCCc---cccccccCCcccccccccCCCCcc------cceehHHHHHHHHHhc----------CcCCCcch
Q 003836          647 GLAKLLTLDQSHT---NTAIRGTKGYVAPEWFRNMPITVK------VDVYSYGVLLLEIICL----------RRNIDNEI  707 (792)
Q Consensus       647 g~a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~k------~DV~S~Gv~l~el~tg----------~~p~~~~~  707 (792)
                      |+++.........   .....||+.|+|||.+.+...+.+      +|||||||++|||++|          +.||....
T Consensus       187 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~  266 (337)
T 3mdy_A          187 GLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLV  266 (337)
T ss_dssp             TTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTS
T ss_pred             CCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhc
Confidence            9998765433221   124569999999999987766655      9999999999999999          44543321


Q ss_pred             hhhhhhhHHHHHHHhhcccchhHhhhchhcccC-----CHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCCC
Q 003836          708 SKVDKAILTDWAYDRYQERTLEALVENDLEAMN-----NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP  780 (792)
Q Consensus       708 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~~  780 (792)
                      .....  ..... .        ...........     ....+.++.+++.+||+.||++|||+.||++.|+.+.+-.
T Consensus       267 ~~~~~--~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~  333 (337)
T 3mdy_A          267 PSDPS--YEDMR-E--------IVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ  333 (337)
T ss_dssp             CSSCC--HHHHH-H--------HHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             CCCCc--hhhhH-H--------HHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence            11100  00000 0        00011111111     2367788999999999999999999999999999876544

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=2.4e-38  Score=341.45  Aligned_cols=253  Identities=26%  Similarity=0.420  Sum_probs=200.8

Q ss_pred             hhhhhhcCccccceEEEeeecCCCce--EEEEEEccccc-ccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSN--HVAVKKLNSVF-QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~--~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~  578 (792)
                      +.+.+.||+|+||.||++..... +.  .+|+|++.... ....+.+.+|+++++++ +||||+++++++.+.+..++||
T Consensus        27 y~~~~~lg~G~~g~Vy~~~~~~~-~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~  105 (327)
T 1fvr_A           27 IKFQDVIGEGNFGQVLKARIKKD-GLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAI  105 (327)
T ss_dssp             CEEEEEEECGGGCEEEEEEEEET-TEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ccceeeeecCCCceEEEEEEccC-CcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEE
Confidence            34567899999999999976533 33  45999887532 33456799999999999 8999999999999999999999


Q ss_pred             EeccCCCccccccCCC----------------CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeE
Q 003836          579 EFMSNGTVASFLFGDS----------------KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNAR  642 (792)
Q Consensus       579 E~~~~gsL~~~l~~~~----------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~k  642 (792)
                      ||+++|+|.+++....                .+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+|
T Consensus       106 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~k  182 (327)
T 1fvr_A          106 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAK  182 (327)
T ss_dssp             CCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEE
T ss_pred             ecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCeEE
Confidence            9999999999997653                689999999999999999999998   999999999999999999999


Q ss_pred             EeecCCCccccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHH
Q 003836          643 ISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYD  721 (792)
Q Consensus       643 l~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~  721 (792)
                      |+|||+++.....  .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||........        ..
T Consensus       183 L~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~--------~~  252 (327)
T 1fvr_A          183 IADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL--------YE  252 (327)
T ss_dssp             ECCTTCEESSCEE--CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH--------HH
T ss_pred             EcccCcCcccccc--ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHH--------HH
Confidence            9999999743221  12223456889999999988889999999999999999998 9999965432110        00


Q ss_pred             hhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          722 RYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       722 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                      .         +........+...+..+.+++.+||+.+|++|||++|+++.|+.+++
T Consensus       253 ~---------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  300 (327)
T 1fvr_A          253 K---------LPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE  300 (327)
T ss_dssp             H---------GGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             H---------hhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            0         11111112223345678899999999999999999999999987643

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=4.5e-38  Score=331.20  Aligned_cols=244  Identities=27%  Similarity=0.364  Sum_probs=199.3

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      .+.+.||+|+||+||++... .+++.||+|++....   ......+.+|+.++++++||||+++++++.+....++||||
T Consensus        12 ~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   90 (279)
T 3fdn_A           12 EIGRPLGKGKFGNVYLAREK-QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEY   90 (279)
T ss_dssp             EEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             EEeeEEecCCCeEEEEEEEc-cCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEec
Confidence            34578999999999999754 456789999986532   22356789999999999999999999999999999999999


Q ss_pred             ccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          581 MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       581 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +++++|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||++......   ..
T Consensus        91 ~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~---~~  164 (279)
T 3fdn_A           91 APLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---RR  164 (279)
T ss_dssp             CTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC--------
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCcc---cc
Confidence            99999999998778899999999999999999999998   9999999999999999999999999998654322   22


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ....|++.|+|||.+.+..++.++||||||+++|||++|+.||............                ..  .....
T Consensus       165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~----------------~~--~~~~~  226 (279)
T 3fdn_A          165 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI----------------SR--VEFTF  226 (279)
T ss_dssp             ---CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH----------------HH--TCCCC
T ss_pred             cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHH----------------Hh--CCCCC
Confidence            3456899999999999999999999999999999999999999754322110000                00  01112


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      +...+..+.+++.+||+.||++|||++|+++.
T Consensus       227 ~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          227 PDFVTEGARDLISRLLKHNPSQRPMLREVLEH  258 (279)
T ss_dssp             CTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred             CCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            22345678899999999999999999999974

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=3.6e-38  Score=348.08  Aligned_cols=248  Identities=20%  Similarity=0.316  Sum_probs=195.7

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccC--CCCcccccceeccCCceEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTH--HKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~--h~niv~l~g~~~~~~~~~lV~  578 (792)
                      +.+.+.||+|+||.||++...  .++.||||++....  ....+.+.+|+.++.+++  |+||+++++++...+..++||
T Consensus        58 y~~~~~LG~G~fg~Vy~~~~~--~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  135 (390)
T 2zmd_A           58 YSILKQIGSGGSSKVFQVLNE--KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  135 (390)
T ss_dssp             EEEEEEEECCSSEEEEEEECT--TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             eEEEEEEccCCCeEEEEEEcC--CCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence            345678999999999999754  36789999986532  334578999999999996  599999999999999999999


Q ss_pred             EeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          579 EFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       579 E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      | +.+++|.+++.....+++..+..++.||+.||.|||+.   +|+||||||+|||++ ++.+||+|||+++........
T Consensus       136 E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~  210 (390)
T 2zmd_A          136 E-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS  210 (390)
T ss_dssp             E-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC------
T ss_pred             e-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc
Confidence            9 67889999998888889999999999999999999998   999999999999996 579999999999876543322


Q ss_pred             -ccccccccCCccccccccc-----------CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhccc
Q 003836          659 -TNTAIRGTKGYVAPEWFRN-----------MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQER  726 (792)
Q Consensus       659 -~~~~~~gt~~y~aPE~~~~-----------~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~  726 (792)
                       ......||+.|+|||++.+           ..++.++|||||||++|||++|+.||........               
T Consensus       211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~---------------  275 (390)
T 2zmd_A          211 VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---------------  275 (390)
T ss_dssp             ---CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH---------------
T ss_pred             ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHH---------------
Confidence             2334579999999999865           4689999999999999999999999965322111               


Q ss_pred             chhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          727 TLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       727 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .+..+++.......+.....++.+++.+||+.||.+|||+.|+++.
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  321 (390)
T 2zmd_A          276 KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  321 (390)
T ss_dssp             HHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence            0112222222222222234678899999999999999999999864

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=5.3e-38  Score=330.41  Aligned_cols=244  Identities=24%  Similarity=0.368  Sum_probs=180.0

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +.+.||+|+||.||+|... .+++.||||++....   ....+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus        15 ~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   93 (278)
T 3cok_A           15 VGNLLGKGSFAGVYRAESI-HTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMC   93 (278)
T ss_dssp             EEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             eeeeecCCCceEEEEEEEc-cCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecC
Confidence            4578999999999999753 456789999986532   223477999999999999999999999999999999999999


Q ss_pred             cCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          582 SNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       582 ~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      ++++|.+++... ..+++..+..++.||+.||+|||+.   +|+|+||||+|||++.++.+||+|||++........ ..
T Consensus        94 ~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~-~~  169 (278)
T 3cok_A           94 HNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE-KH  169 (278)
T ss_dssp             TTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC-------
T ss_pred             CCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC-cc
Confidence            999999999765 5789999999999999999999998   999999999999999999999999999987643322 12


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ....||+.|+|||.+.+..++.++||||||+++|||++|+.||........                +..+.....  ..
T Consensus       170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----------------~~~~~~~~~--~~  231 (278)
T 3cok_A          170 YTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT----------------LNKVVLADY--EM  231 (278)
T ss_dssp             ----------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------------------CCSSCC--CC
T ss_pred             eeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH----------------HHHHhhccc--CC
Confidence            235689999999999998999999999999999999999999975432110                000000000  11


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      +...+.++.+++.+||+.||++|||++++++
T Consensus       232 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          232 PSFLSIEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             ccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence            2234567889999999999999999999987

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=5.1e-38  Score=332.75  Aligned_cols=244  Identities=27%  Similarity=0.405  Sum_probs=195.6

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceecc----CCceEEEE
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDE----GQNRLLVY  578 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~----~~~~~lV~  578 (792)
                      +.+.||+|+||+||+|... .++..||+|++....  ....+.+.+|+.++++++||||+++++++..    ....++||
T Consensus        30 ~~~~lg~G~~g~Vy~~~~~-~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~  108 (290)
T 1t4h_A           30 FDIEIGRGSFKTVYKGLDT-ETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEECSSEEEEEEEET-TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEE
T ss_pred             eeeeccCCCCeEEEEeEec-CCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEE
Confidence            4567999999999999654 566789999987532  3345678999999999999999999998864    45689999


Q ss_pred             EeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCC--eEecCCCCCcEEEc-CCCCeEEeecCCCccccCC
Q 003836          579 EFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ--IIHCDIKPQNILLD-DHYNARISDFGLAKLLTLD  655 (792)
Q Consensus       579 E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivH~dikp~NILl~-~~~~~kl~Dfg~a~~~~~~  655 (792)
                      ||+++++|.+++.....+++..+..++.||+.||.|||+.   +  |+||||||+|||++ +++.+||+|||++......
T Consensus       109 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~  185 (290)
T 1t4h_A          109 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS  185 (290)
T ss_dssp             ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred             EecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCccccccc
Confidence            9999999999998778899999999999999999999998   7  99999999999998 7899999999999754322


Q ss_pred             CCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          656 QSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       656 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                         ......||+.|+|||.+. ..++.++||||||+++|||++|+.||.........       .........       
T Consensus       186 ---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~-------~~~~~~~~~-------  247 (290)
T 1t4h_A          186 ---FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQI-------YRRVTSGVK-------  247 (290)
T ss_dssp             ---SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHH-------HHHHTTTCC-------
T ss_pred             ---ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHH-------HHHHhccCC-------
Confidence               223456899999999886 45899999999999999999999999653322110       000011000       


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                       ....+...+.++.+++.+||+.||.+|||++|+++
T Consensus       248 -~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          248 -PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             -CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             -ccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence             00111122356889999999999999999999997

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=3.7e-38  Score=337.19  Aligned_cols=259  Identities=20%  Similarity=0.332  Sum_probs=195.7

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +.+.+.||+|+||.||+|... .+++.||+|++....   ......+.+|+.++++++||||+++++++.+.+..++|||
T Consensus        34 y~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  112 (310)
T 2wqm_A           34 FRIEKKIGRGQFSEVYRAACL-LDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE  112 (310)
T ss_dssp             EEEEEEEECC--CEEEEEEET-TTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             eEEEEeecCCCCceEEEEEEc-CCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEe
Confidence            445678999999999999754 456799999987532   3345678999999999999999999999999999999999


Q ss_pred             eccCCCccccccC----CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCC
Q 003836          580 FMSNGTVASFLFG----DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD  655 (792)
Q Consensus       580 ~~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~  655 (792)
                      |+++++|.+++..    ...+++..+..++.||+.||.|||+.   +|+|+||||+|||++.++.+||+|||+++.....
T Consensus       113 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~  189 (310)
T 2wqm_A          113 LADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK  189 (310)
T ss_dssp             CCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC---------
T ss_pred             cCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeecCC
Confidence            9999999999864    45688999999999999999999998   9999999999999999999999999999865432


Q ss_pred             CCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          656 QSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       656 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                      .. ......|++.|+|||.+.+..++.++||||||+++|||++|+.||.........  +   . .        .+....
T Consensus       190 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~--~---~-~--------~~~~~~  254 (310)
T 2wqm_A          190 TT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYS--L---C-K--------KIEQCD  254 (310)
T ss_dssp             ----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHH--H---H-H--------HHHTTC
T ss_pred             Cc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHH--H---H-H--------Hhhccc
Confidence            22 223346899999999999999999999999999999999999999653221100  0   0 0        000001


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCCC
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP  780 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~~  780 (792)
                      .........+.++.+++.+||+.||++|||+++|++.|+.+....
T Consensus       255 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~  299 (310)
T 2wqm_A          255 YPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACT  299 (310)
T ss_dssp             SCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             CCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhh
Confidence            111111234567889999999999999999999999999876443

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=2.5e-38  Score=341.53  Aligned_cols=262  Identities=18%  Similarity=0.267  Sum_probs=191.9

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccc--cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ--DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      +.+.+.||+|+||+||++.. ..+++.||||++.....  ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus        36 y~~~~~lg~G~~g~V~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  114 (329)
T 3gbz_A           36 YRRITKLGEGTYGEVYKAID-TVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEY  114 (329)
T ss_dssp             EEEEEEEEECSSSEEEEEEE-TTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             EEEEEEEEecCCeEEEEEEE-CCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEec
Confidence            34457899999999999964 35678999999975432  2345678999999999999999999999999999999999


Q ss_pred             ccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEc-----CCCCeEEeecCCCccccCC
Q 003836          581 MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLD-----DHYNARISDFGLAKLLTLD  655 (792)
Q Consensus       581 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~-----~~~~~kl~Dfg~a~~~~~~  655 (792)
                      +++ +|.+++.....+++..+..|+.||+.||+|||+.   +|+||||||+|||++     +++.+||+|||+++.....
T Consensus       115 ~~~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~  190 (329)
T 3gbz_A          115 AEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIP  190 (329)
T ss_dssp             CSE-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC--
T ss_pred             CCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCc
Confidence            985 9999998888899999999999999999999999   999999999999994     4556999999999876432


Q ss_pred             CCCccccccccCCcccccccccC-CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchh-----
Q 003836          656 QSHTNTAIRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLE-----  729 (792)
Q Consensus       656 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  729 (792)
                      .. ......||+.|+|||.+.+. .++.++|||||||++|||++|+.||................ .........     
T Consensus       191 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  268 (329)
T 3gbz_A          191 IR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVL-GLPDDTTWPGVTAL  268 (329)
T ss_dssp             ----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH-CCCCTTTSTTGGGS
T ss_pred             cc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHh-CCCchhhhhhhhhh
Confidence            22 22344679999999999774 58999999999999999999999997654322111110000 000000000     


Q ss_pred             --------HhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          730 --------ALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       730 --------~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                              ......+..........++.+++.+||+.||++|||++|+++
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          269 PDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             TTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence                    000000000001113467889999999999999999999997

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=4.5e-38  Score=359.04  Aligned_cols=248  Identities=28%  Similarity=0.331  Sum_probs=202.8

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccc---cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV---FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +.+.||+|+||.||++... .+++.||+|++.+.   .......+.+|++++++++||||+++++++.+.+..++||||+
T Consensus       188 ~~~~LG~G~fG~Vy~a~~~-~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~  266 (576)
T 2acx_A          188 QYRVLGKGGFGEVCACQVR-ATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLM  266 (576)
T ss_dssp             EEEEEEEETTEEEEEEEET-TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             EEEEEeeCCCEEEEEEEEC-CCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcC
Confidence            4468999999999999754 46789999998653   2334567899999999999999999999999999999999999


Q ss_pred             cCCCccccccCCC--CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          582 SNGTVASFLFGDS--KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       582 ~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      ++|+|.+++....  .+++..+..++.||+.||.|||++   +|+||||||+||||+.++.+||+|||+++......  .
T Consensus       267 ~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~--~  341 (576)
T 2acx_A          267 NGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ--T  341 (576)
T ss_dssp             CSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC--C
T ss_pred             CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecccCc--c
Confidence            9999999997653  489999999999999999999999   99999999999999999999999999998764332  2


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||...........+..             .+. .....
T Consensus       342 ~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~-------------~i~-~~~~~  407 (576)
T 2acx_A          342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVER-------------LVK-EVPEE  407 (576)
T ss_dssp             EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHH-------------HHH-HCCCC
T ss_pred             ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHH-------------Hhh-ccccc
Confidence            2345799999999999998999999999999999999999999976432211111100             000 00111


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCC-----CHHhHHHH
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRP-----TMRKVTQM  772 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RP-----s~~evl~~  772 (792)
                      .+...+.++.+++.+||+.||.+||     +++||++.
T Consensus       408 ~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H  445 (576)
T 2acx_A          408 YSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH  445 (576)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred             CCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence            2233456788999999999999999     78888864

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=2.9e-38  Score=333.17  Aligned_cols=254  Identities=23%  Similarity=0.346  Sum_probs=202.7

Q ss_pred             HHHHHhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceecc-------
Q 003836          498 LVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDE-------  570 (792)
Q Consensus       498 l~~~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~-------  570 (792)
                      .....+.+.+.||+|+||.||++... .+++.||+|++....    +.+.+|++++++++||||+++++++..       
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   82 (284)
T 2a19_B            8 RFGMDFKEIELIGSGGFGQVFKAKHR-IDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET   82 (284)
T ss_dssp             HHHHHEEEEEEEECSSSCCEEEEEET-TTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---
T ss_pred             hhccccceeeeeccCCceEEEEEEEc-CCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccc
Confidence            33444556688999999999999764 456799999987542    457789999999999999999998854       


Q ss_pred             ---------CCceEEEEEeccCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCC
Q 003836          571 ---------GQNRLLVYEFMSNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY  639 (792)
Q Consensus       571 ---------~~~~~lV~E~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~  639 (792)
                               ....++||||+++++|.+++...  ..+++..+..++.||+.||.|||+.   +|+|+||||+|||+++++
T Consensus        83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~  159 (284)
T 2a19_B           83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTK  159 (284)
T ss_dssp             ------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETT
T ss_pred             ccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCC
Confidence                     44578999999999999999654  5789999999999999999999998   999999999999999999


Q ss_pred             CeEEeecCCCccccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHH
Q 003836          640 NARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWA  719 (792)
Q Consensus       640 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~  719 (792)
                      .+||+|||+++......  ......|++.|+|||.+.+..++.++||||||+++|||++|..|+.....          .
T Consensus       160 ~~kl~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~----------~  227 (284)
T 2a19_B          160 QVKIGDFGLVTSLKNDG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK----------F  227 (284)
T ss_dssp             EEEECCCTTCEESSCCS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHH----------H
T ss_pred             CEEECcchhheeccccc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHH----------H
Confidence            99999999998765432  22334689999999999999999999999999999999999987632110          0


Q ss_pred             HHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCCCCCC
Q 003836          720 YDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPIPP  783 (792)
Q Consensus       720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~~~p~  783 (792)
                      ..        .+.....    +...+..+.+++.+||+.||++|||+.|+++.|+.+..-+...
T Consensus       228 ~~--------~~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~~  279 (284)
T 2a19_B          228 FT--------DLRDGII----SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKN  279 (284)
T ss_dssp             HH--------HHHTTCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-----
T ss_pred             HH--------Hhhcccc----cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCcc
Confidence            00        0111111    1123456788999999999999999999999998876554443

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=1.4e-37  Score=335.40  Aligned_cols=260  Identities=23%  Similarity=0.325  Sum_probs=204.6

Q ss_pred             cCHHHHHHHHhhhh-hhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhccc-CCCCccccccee
Q 003836          493 FTYKELVEVTRGFK-EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQT-HHKNLVRLLGYC  568 (792)
Q Consensus       493 ~~~~el~~~~~~~~-~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~  568 (792)
                      |...+.....+.+. +.||+|+||+||++... .+++.||+|++....  ......+.+|+.++.++ +||||+++++++
T Consensus        20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~   98 (327)
T 3lm5_A           20 FQSMENFNNFYILTSKELGRGKFAVVRQCISK-STGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVY   98 (327)
T ss_dssp             SBCHHHHHHHEEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred             HHHHHhhhhEEeeccceeCCCCCeEEEEEEEC-CCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence            34444455555555 78999999999999754 456899999987543  23467899999999999 569999999999


Q ss_pred             ccCCceEEEEEeccCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC---CCCeEE
Q 003836          569 DEGQNRLLVYEFMSNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD---HYNARI  643 (792)
Q Consensus       569 ~~~~~~~lV~E~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~---~~~~kl  643 (792)
                      .+.+..++||||+++|+|.+++...  ..+++..+..++.||+.||+|||+.   +|+||||||+|||++.   ++.+||
T Consensus        99 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL  175 (327)
T 3lm5_A           99 ENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKI  175 (327)
T ss_dssp             ECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEE
T ss_pred             EeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEE
Confidence            9999999999999999999999654  6789999999999999999999999   9999999999999998   789999


Q ss_pred             eecCCCccccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhh
Q 003836          644 SDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRY  723 (792)
Q Consensus       644 ~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~  723 (792)
                      +|||+++......  ......||+.|+|||.+.+..++.++||||||+++|||++|+.||...........+   .  . 
T Consensus       176 ~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i---~--~-  247 (327)
T 3lm5_A          176 VDFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNI---S--Q-  247 (327)
T ss_dssp             CCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---H--H-
T ss_pred             eeCccccccCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHH---H--h-
Confidence            9999998764322  223456899999999999999999999999999999999999999764332111000   0  0 


Q ss_pred             cccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          724 QERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       724 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                              .............+..+.+++.+||+.||++|||++|+++.
T Consensus       248 --------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h  288 (327)
T 3lm5_A          248 --------VNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH  288 (327)
T ss_dssp             --------TCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred             --------cccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence                    00011111112345678899999999999999999999874

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=4.6e-38  Score=348.32  Aligned_cols=270  Identities=19%  Similarity=0.246  Sum_probs=208.7

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCC--ceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQ--NRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~--~~~lV~E  579 (792)
                      +.+.+.||+|+||+||+|... .+++.||||++.... ....+.+.+|++++++++||||+++++++.+..  ..++|||
T Consensus        11 y~i~~~LG~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e   89 (396)
T 4eut_A           11 WLLSDILGQGATANVFRGRHK-KTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME   89 (396)
T ss_dssp             EEEEEEEEECSSEEEEEEEET-TTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEC
T ss_pred             eEEEEEEEcCCCeEEEEEEEC-CCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEe
Confidence            345678999999999999764 456799999997543 334577889999999999999999999997655  7799999


Q ss_pred             eccCCCccccccCCC---CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEE----cCCCCeEEeecCCCccc
Q 003836          580 FMSNGTVASFLFGDS---KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILL----DDHYNARISDFGLAKLL  652 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~---~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl----~~~~~~kl~Dfg~a~~~  652 (792)
                      |+++|+|.+++....   .+++..+..++.||+.||+|||+.   +|+||||||+|||+    +.++.+||+|||+++..
T Consensus        90 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~  166 (396)
T 4eut_A           90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL  166 (396)
T ss_dssp             CCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEEC
T ss_pred             cCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCceEc
Confidence            999999999997653   389999999999999999999999   99999999999999    77888999999999876


Q ss_pred             cCCCCCccccccccCCccccccccc--------CCCCcccceehHHHHHHHHHhcCcCCCcchhhhh-hhhHHHHHHHhh
Q 003836          653 TLDQSHTNTAIRGTKGYVAPEWFRN--------MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVD-KAILTDWAYDRY  723 (792)
Q Consensus       653 ~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~  723 (792)
                      ....  ......||+.|+|||.+.+        ..++.++|||||||++|||++|+.||........ ...+...... .
T Consensus       167 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~-~  243 (396)
T 4eut_A          167 EDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG-K  243 (396)
T ss_dssp             CCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHS-C
T ss_pred             cCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcC-C
Confidence            4332  2234568999999999865        5678899999999999999999999965332211 1111111100 0


Q ss_pred             cccch---hHhhh--------chhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCC
Q 003836          724 QERTL---EALVE--------NDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEV  779 (792)
Q Consensus       724 ~~~~~---~~~~~--------~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~  779 (792)
                      .....   .....        ..............+.+++.+||+.||++||+++|+++.++.+++.
T Consensus       244 p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~  310 (396)
T 4eut_A          244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR  310 (396)
T ss_dssp             CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred             CcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence            00000   00000        0111223467788899999999999999999999999999887653

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=4.9e-38  Score=341.54  Aligned_cols=244  Identities=26%  Similarity=0.332  Sum_probs=196.4

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccc---cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ---DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +...+.||+|+||+||+|... .+++.||||++.....   ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus        56 y~~~~~lG~G~~g~Vy~a~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  134 (348)
T 1u5q_A           56 FSDLREIGHGSFGAVYFARDV-RNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME  134 (348)
T ss_dssp             EEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             eeeeeEEccCCCEEEEEEEEc-cCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEe
Confidence            344578999999999999753 4578999999875322   234578999999999999999999999999999999999


Q ss_pred             eccCCCccccccC-CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          580 FMSNGTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       580 ~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      |++ |+|.+++.. ...+++..+..++.||++||.|||+.   +|+||||||+|||++.++.+||+|||+++.....   
T Consensus       135 ~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~---  207 (348)
T 1u5q_A          135 YCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA---  207 (348)
T ss_dssp             CCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB---
T ss_pred             cCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC---
Confidence            998 578777753 46789999999999999999999999   9999999999999999999999999999865432   


Q ss_pred             ccccccccCCcccccccc---cCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          659 TNTAIRGTKGYVAPEWFR---NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~---~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                        ....||+.|+|||.+.   ...++.++|||||||++|||++|+.||........   +..             +....
T Consensus       208 --~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~---~~~-------------~~~~~  269 (348)
T 1u5q_A          208 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA---LYH-------------IAQNE  269 (348)
T ss_dssp             --CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH---HHH-------------HHHSC
T ss_pred             --CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH---HHH-------------HHhcC
Confidence              2346899999999984   56789999999999999999999999865432111   000             00000


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .........+..+.+++.+||+.+|++|||++++++.
T Consensus       270 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h  306 (348)
T 1u5q_A          270 SPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  306 (348)
T ss_dssp             CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence            0111122334668899999999999999999999864

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=2.2e-37  Score=349.13  Aligned_cols=260  Identities=24%  Similarity=0.258  Sum_probs=192.1

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccc--cccchHHHHHHHHHhcccCCCCcccccceeccC------Cce
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV--FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEG------QNR  574 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~------~~~  574 (792)
                      +.+.+.||+|+||+||++.. ..+++.||||++...  .....+.+.+|+.++++++||||+++++++...      .+.
T Consensus        64 y~~~~~lG~G~~g~V~~a~~-~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~  142 (464)
T 3ttj_A           64 YQNLKPIGSGAQGIVCAAYD-AVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV  142 (464)
T ss_dssp             EEEEEEEEECSSCEEEEEEE-TTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEE
T ss_pred             eEEEEEeecCCCeEEEEEEE-CCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeE
Confidence            33457899999999999964 455789999999754  233456789999999999999999999999654      457


Q ss_pred             EEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccC
Q 003836          575 LLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL  654 (792)
Q Consensus       575 ~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~  654 (792)
                      +|||||++++ |.+.+..  .+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++....
T Consensus       143 ~lv~E~~~~~-l~~~~~~--~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  216 (464)
T 3ttj_A          143 YLVMELMDAN-LCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  216 (464)
T ss_dssp             EEEEECCSEE-HHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC-----
T ss_pred             EEEEeCCCCC-HHHHHhh--cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeeeecCC
Confidence            9999999875 5555533  488999999999999999999999   999999999999999999999999999987643


Q ss_pred             CCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH-------HHHhhcccc
Q 003836          655 DQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW-------AYDRYQERT  727 (792)
Q Consensus       655 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~-------~~~~~~~~~  727 (792)
                      .  .......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+...       ..... ...
T Consensus       217 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~-~~~  293 (464)
T 3ttj_A          217 S--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL-QPT  293 (464)
T ss_dssp             C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTS-CHH
T ss_pred             C--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHc-chh
Confidence            2  2334567999999999999999999999999999999999999999765322111111000       00000 000


Q ss_pred             hhHhhhc---------------hhccc---CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          728 LEALVEN---------------DLEAM---NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       728 ~~~~~~~---------------~~~~~---~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ....+..               .....   .......++.+|+.+||+.||++|||++|+++.
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  356 (464)
T 3ttj_A          294 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  356 (464)
T ss_dssp             HHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            0011110               00000   011236789999999999999999999999974

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=1e-37  Score=331.03  Aligned_cols=258  Identities=19%  Similarity=0.257  Sum_probs=201.3

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCccccccee-ccCCceEEEEEec
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYC-DEGQNRLLVYEFM  581 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~-~~~~~~~lV~E~~  581 (792)
                      +.+.+.||+|+||.||+|... .+++.||||++....  ....+.+|++++++++|++++..++.+ .+.+..++||||+
T Consensus        11 y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~   87 (296)
T 4hgt_A           11 YRLGRKIGSGSFGDIYLGTDI-AAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL   87 (296)
T ss_dssp             CEEEEEEEECSSSEEEEEEET-TTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             eEEeeeecCCCCeEEEEEEEc-CCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc
Confidence            445688999999999999753 457899999865432  234688999999999988877777766 6677789999999


Q ss_pred             cCCCccccccC-CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEE---cCCCCeEEeecCCCccccCCCC
Q 003836          582 SNGTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILL---DDHYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       582 ~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl---~~~~~~kl~Dfg~a~~~~~~~~  657 (792)
                       +++|.+++.. ...+++..+..++.||+.||+|||+.   +|+||||||+|||+   ++++.+||+|||+++.......
T Consensus        88 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~  163 (296)
T 4hgt_A           88 -GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART  163 (296)
T ss_dssp             -CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred             -CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceeccCccc
Confidence             9999999974 45789999999999999999999999   99999999999999   7889999999999987654433


Q ss_pred             C------ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHh
Q 003836          658 H------TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEAL  731 (792)
Q Consensus       658 ~------~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  731 (792)
                      .      ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...................... .... 
T Consensus       164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~-  241 (296)
T 4hgt_A          164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST-PIEV-  241 (296)
T ss_dssp             CCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS-CHHH-
T ss_pred             CccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccc-hhhh-
Confidence            1      2234568999999999999999999999999999999999999997643322111111111110000 0000 


Q ss_pred             hhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          732 VENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       732 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                              .....+..+.+++.+||+.+|++|||+++|++.|+++.
T Consensus       242 --------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~  279 (296)
T 4hgt_A          242 --------LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF  279 (296)
T ss_dssp             --------HTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred             --------hhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence                    00112467889999999999999999999999998864

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=1.1e-37  Score=329.03  Aligned_cols=249  Identities=23%  Similarity=0.310  Sum_probs=201.7

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .+.+.||+|+||.||++... .+++.||+|++....  ....+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus         9 ~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   87 (284)
T 3kk8_A            9 DVKEELGKGAFSVVRRCVHK-TTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLV   87 (284)
T ss_dssp             EEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             hhhhhhcCcCCeEEEEEEEc-CCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecC
Confidence            44578999999999999754 456789999986543  233467889999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCC---eEEeecCCCccccCCCCC
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYN---ARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~---~kl~Dfg~a~~~~~~~~~  658 (792)
                      ++++|.+++.....+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.   +||+|||++.......  
T Consensus        88 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~--  162 (284)
T 3kk8_A           88 TGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE--  162 (284)
T ss_dssp             CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC--
T ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc--
Confidence            9999999998878899999999999999999999998   9999999999999986655   9999999998664322  


Q ss_pred             ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          659 TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||..........   .......           ....
T Consensus       163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~---~~~~~~~-----------~~~~  228 (284)
T 3kk8_A          163 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYA---QIKAGAY-----------DYPS  228 (284)
T ss_dssp             BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHHTCC-----------CCCT
T ss_pred             cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHH---HHHhccc-----------cCCc
Confidence            2234568999999999999999999999999999999999999996543221100   0000000           0000


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ......+.++.+++.+||+.||++|||++|+++.
T Consensus       229 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  262 (284)
T 3kk8_A          229 PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  262 (284)
T ss_dssp             TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             hhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence            0111234678899999999999999999999874

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=8e-38  Score=330.43  Aligned_cols=248  Identities=25%  Similarity=0.376  Sum_probs=195.0

Q ss_pred             HhhhhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      .+.+.+.||+|+||+||++... .+++.+|+|++.... ....+.+.+|++++++++||||+++++++.+....++||||
T Consensus        23 ~y~~~~~lg~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  101 (285)
T 3is5_A           23 LFIFKRKLGSGAFGDVHLVEER-SSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET  101 (285)
T ss_dssp             HEEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             heeecceeccCCCeEEEEEEEc-cCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence            4556789999999999999754 456789999987643 33467899999999999999999999999999999999999


Q ss_pred             ccCCCccccccCC----CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEE---cCCCCeEEeecCCCcccc
Q 003836          581 MSNGTVASFLFGD----SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILL---DDHYNARISDFGLAKLLT  653 (792)
Q Consensus       581 ~~~gsL~~~l~~~----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl---~~~~~~kl~Dfg~a~~~~  653 (792)
                      +++|+|.+++...    ..+++..+..++.||+.||+|||+.   +|+||||||+|||+   +.++.+||+|||+++...
T Consensus       102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~  178 (285)
T 3is5_A          102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK  178 (285)
T ss_dssp             CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred             CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence            9999999988543    6789999999999999999999998   99999999999999   456789999999998654


Q ss_pred             CCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhh
Q 003836          654 LDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVE  733 (792)
Q Consensus       654 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  733 (792)
                      ...  ......||+.|+|||.+. ..++.++||||||+++|||++|+.||...........      ......       
T Consensus       179 ~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~------~~~~~~-------  242 (285)
T 3is5_A          179 SDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQK------ATYKEP-------  242 (285)
T ss_dssp             ----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH------HHHCCC-------
T ss_pred             Ccc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhh------hccCCc-------
Confidence            322  223456899999999885 5689999999999999999999999976432211000      000000       


Q ss_pred             chhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          734 NDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       734 ~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                       .... .....+..+.+++.+||+.||++|||++|+++
T Consensus       243 -~~~~-~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          243 -NYAV-ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             -CCCC---CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             -cccc-ccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence             0000 00113457789999999999999999999987

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=1e-37  Score=329.12  Aligned_cols=251  Identities=25%  Similarity=0.349  Sum_probs=200.9

Q ss_pred             HHhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccc------cchHHHHHHHHHhcccCCCCcccccceeccCCce
Q 003836          501 VTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ------DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNR  574 (792)
Q Consensus       501 ~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~------~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~  574 (792)
                      ..+.+.+.||+|+||.||++... .+++.+|+|++.....      ...+.+.+|+.++++++||||+++++++.+....
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   83 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQK-GTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV   83 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEc-CCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence            34556788999999999999754 4567999999875321      2367899999999999999999999999999999


Q ss_pred             EEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCC----CeEEeecCCCc
Q 003836          575 LLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY----NARISDFGLAK  650 (792)
Q Consensus       575 ~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~----~~kl~Dfg~a~  650 (792)
                      ++||||+++++|.+++.....+++..+..++.||+.||.|||+.   +|+|+||||+||+++.++    .+||+|||+++
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~  160 (283)
T 3bhy_A           84 VLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH  160 (283)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred             EEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence            99999999999999998777899999999999999999999998   999999999999999877    89999999998


Q ss_pred             cccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhH
Q 003836          651 LLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEA  730 (792)
Q Consensus       651 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  730 (792)
                      ......  ......|++.|+|||.+.+..++.++||||||+++|||++|+.||........   +...     ....   
T Consensus       161 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~~~-----~~~~---  227 (283)
T 3bhy_A          161 KIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQET---LTNI-----SAVN---  227 (283)
T ss_dssp             ECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH---HHHH-----HTTC---
T ss_pred             eccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHH---HHHh-----Hhcc---
Confidence            764322  22344689999999999999999999999999999999999999976432211   0000     0000   


Q ss_pred             hhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          731 LVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       731 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                         ...........+..+.+++.+||+.||++|||+.|+++
T Consensus       228 ---~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  265 (283)
T 3bhy_A          228 ---YDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE  265 (283)
T ss_dssp             ---CCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             ---cCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence               00000000123456889999999999999999999997

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=1.1e-37  Score=352.40  Aligned_cols=192  Identities=23%  Similarity=0.355  Sum_probs=153.0

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceec-----cCCceE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCD-----EGQNRL  575 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~-----~~~~~~  575 (792)
                      +.+.+.||+|+||+||+|... .+++.||||++....  ....+.+.+|++++++++||||+++++++.     .....+
T Consensus        55 y~~~~~lG~G~~g~V~~~~~~-~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~  133 (458)
T 3rp9_A           55 YEIRHLIGTGSYGHVCEAYDK-LEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELY  133 (458)
T ss_dssp             EEECCC-------CEEEEEEC-C--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred             eEEeeEeeecCCeEEEEEEEC-CCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEE
Confidence            445678999999999999654 456899999987542  234567899999999999999999999994     335789


Q ss_pred             EEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCC
Q 003836          576 LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD  655 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~  655 (792)
                      +||||+. ++|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+||||+.++.+||+|||+++.....
T Consensus       134 lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  209 (458)
T 3rp9_A          134 VVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYP  209 (458)
T ss_dssp             EEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSC
T ss_pred             EEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhccCc
Confidence            9999985 69999998888899999999999999999999999   9999999999999999999999999999876432


Q ss_pred             CC--------------------------CccccccccCCccccccc-ccCCCCcccceehHHHHHHHHHhc
Q 003836          656 QS--------------------------HTNTAIRGTKGYVAPEWF-RNMPITVKVDVYSYGVLLLEIICL  699 (792)
Q Consensus       656 ~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~k~DV~S~Gv~l~el~tg  699 (792)
                      ..                          .......||+.|+|||++ ....++.++|||||||++|||++|
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg  280 (458)
T 3rp9_A          210 ENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM  280 (458)
T ss_dssp             TTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred             cccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence            21                          112345689999999976 566799999999999999999994

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=1.1e-37  Score=332.73  Aligned_cols=250  Identities=24%  Similarity=0.328  Sum_probs=201.5

Q ss_pred             HhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .+.+.+.||+|+||+||++... .+++.||+|++........+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus        10 ~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   88 (304)
T 2jam_A           10 TFIFMEVLGSGAFSEVFLVKQR-LTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV   88 (304)
T ss_dssp             HEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             cceeeeeccCCCCceEEEEEEC-CCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence            4456688999999999999754 456799999998655555677999999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEE---cCCCCeEEeecCCCccccCCCCC
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILL---DDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl---~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      ++++|.+++.....+++..+..++.||+.||.|||+.   +|+||||||+|||+   ++++.+||+|||+++.....   
T Consensus        89 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~---  162 (304)
T 2jam_A           89 SGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG---  162 (304)
T ss_dssp             CSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB---
T ss_pred             CCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC---
Confidence            9999999998777899999999999999999999998   99999999999999   78899999999999764322   


Q ss_pred             ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          659 TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      ......|++.|+|||.+.+..++.++||||||+++|||++|+.||........   ...     ..+...      ....
T Consensus       163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~-----i~~~~~------~~~~  228 (304)
T 2jam_A          163 IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKL---FEK-----IKEGYY------EFES  228 (304)
T ss_dssp             TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHH---HHH-----HHHCCC------CCCT
T ss_pred             ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH---HHH-----HHcCCC------CCCc
Confidence            22334689999999999999999999999999999999999999965432110   000     000000      0011


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ......+..+.+++.+||+.||++|||++|+++.
T Consensus       229 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h  262 (304)
T 2jam_A          229 PFWDDISESAKDFICHLLEKDPNERYTCEKALSH  262 (304)
T ss_dssp             TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            1112345678899999999999999999999873

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=7.1e-38  Score=339.30  Aligned_cols=251  Identities=23%  Similarity=0.303  Sum_probs=199.2

Q ss_pred             HhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEEEe
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      .+.+.+.||+|+||.||++... .+++.||||++.+...    ...+|++++.++ +||||+++++++.+++..++||||
T Consensus        23 ~y~~~~~lG~G~~g~V~~~~~~-~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~   97 (342)
T 2qr7_A           23 GYEVKEDIGVGSYSVCKRCIHK-ATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTEL   97 (342)
T ss_dssp             HEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred             cEEEEEEEeeCCCEEEEEEEEC-CCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeC
Confidence            3455678999999999999754 5678999999976432    345688888887 799999999999999999999999


Q ss_pred             ccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC----CCeEEeecCCCccccCCC
Q 003836          581 MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH----YNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       581 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~----~~~kl~Dfg~a~~~~~~~  656 (792)
                      +++|+|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||+.++    +.+||+|||+++......
T Consensus        98 ~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~  174 (342)
T 2qr7_A           98 MKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN  174 (342)
T ss_dssp             CCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC
Confidence            99999999998888899999999999999999999999   99999999999998543    349999999998765432


Q ss_pred             CCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          657 SHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       657 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                      . ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...........+...     ..+..      ..
T Consensus       175 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i-----~~~~~------~~  242 (342)
T 2qr7_A          175 G-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARI-----GSGKF------SL  242 (342)
T ss_dssp             C-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHH-----HHCCC------CC
T ss_pred             C-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHH-----ccCCc------cc
Confidence            2 233456899999999998888999999999999999999999999753221111111110     00000      00


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ........+..+.+++.+||+.||++||++.|+++.
T Consensus       243 ~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h  278 (342)
T 2qr7_A          243 SGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH  278 (342)
T ss_dssp             CSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             CccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            111112345678899999999999999999999864

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=1.3e-37  Score=330.28  Aligned_cols=245  Identities=20%  Similarity=0.293  Sum_probs=203.0

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +.+.||+|+||.||++... .+++.+|+|++....   ....+.+.+|+.++++++|+||+++++++.+.+..++||||+
T Consensus        19 ~~~~lg~G~~g~Vy~~~~~-~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   97 (294)
T 2rku_A           19 RGRFLGKGGFAKCFEISDA-DTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELC   97 (294)
T ss_dssp             EEEEEEEETTEEEEEEEET-TTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EEEEEeecCCEEEEEEEEC-CCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecC
Confidence            4578999999999999754 456789999986542   234567899999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      ++++|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++....... ...
T Consensus        98 ~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~  173 (294)
T 2rku_A           98 RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE-RKK  173 (294)
T ss_dssp             TTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC-CBC
T ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccCcc-ccc
Confidence            9999999998778899999999999999999999999   999999999999999999999999999987643222 223


Q ss_pred             cccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCC
Q 003836          662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN  741 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  741 (792)
                      ...||+.|+|||.+.+..++.++||||||+++|||++|+.||.........        .        .+....  ...+
T Consensus       174 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~--------~--------~~~~~~--~~~~  235 (294)
T 2rku_A          174 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY--------L--------RIKKNE--YSIP  235 (294)
T ss_dssp             CCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH--------H--------HHHTTC--CCCC
T ss_pred             cccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH--------H--------HHhhcc--CCCc
Confidence            456899999999999989999999999999999999999999764322110        0        000000  0112


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          742 VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       742 ~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ......+.+++.+||+.||++|||++|+++.
T Consensus       236 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  266 (294)
T 2rku_A          236 KHINPVAASLIQKMLQTDPTARPTINELLND  266 (294)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             cccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence            2334578889999999999999999999974

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=4.5e-38  Score=339.23  Aligned_cols=256  Identities=29%  Similarity=0.362  Sum_probs=200.4

Q ss_pred             HhhhhhhcCccccceEEEeeec----CCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEE
Q 003836          502 TRGFKEELGRGAFGTVYKGFVN----MGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLL  576 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~----~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~l  576 (792)
                      .+.+.+.||+|+||.||+|...    ..+++.||||++.... .....++.+|+.++++++||||+++++++.+....++
T Consensus        31 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  110 (327)
T 2yfx_A           31 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFI  110 (327)
T ss_dssp             GCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             heEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEE
Confidence            3455678999999999999752    2346689999997542 3445679999999999999999999999999999999


Q ss_pred             EEEeccCCCccccccCC-------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC---CCCeEEeec
Q 003836          577 VYEFMSNGTVASFLFGD-------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD---HYNARISDF  646 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~---~~~~kl~Df  646 (792)
                      ||||+++++|.+++...       ..+++..+..++.||+.||.|||+.   +|+||||||+|||++.   +..+||+||
T Consensus       111 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~Df  187 (327)
T 2yfx_A          111 LMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF  187 (327)
T ss_dssp             EEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECCC
T ss_pred             EEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEECcc
Confidence            99999999999999754       3478899999999999999999998   9999999999999994   456999999


Q ss_pred             CCCccccCCCC-CccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhc
Q 003836          647 GLAKLLTLDQS-HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQ  724 (792)
Q Consensus       647 g~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~  724 (792)
                      |+++....... .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||........   .         
T Consensus       188 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~---~---------  255 (327)
T 2yfx_A          188 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV---L---------  255 (327)
T ss_dssp             HHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH---H---------
T ss_pred             ccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHH---H---------
Confidence            99986543322 22233457889999999998899999999999999999998 8888865422110   0         


Q ss_pred             ccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          725 ERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       725 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                           ..+........+...+..+.+++.+||+.||.+||++.+|++.|+.+.
T Consensus       256 -----~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~  303 (327)
T 2yfx_A          256 -----EFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT  303 (327)
T ss_dssp             -----HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             -----HHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence                 001111111122334567889999999999999999999999998764

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=3.2e-38  Score=334.30  Aligned_cols=256  Identities=24%  Similarity=0.318  Sum_probs=196.5

Q ss_pred             hhhhhhcCccccceEEEeeecCCC--ceEEEEEEcccc---cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGS--SNHVAVKKLNSV---FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLV  577 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~--~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV  577 (792)
                      +.+.+.||+|+||+||+|.....+  ...||||+++..   .....+.+.+|++++++++||||+++++++.+.. .++|
T Consensus        20 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v   98 (291)
T 1u46_A           20 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMV   98 (291)
T ss_dssp             EEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEE
T ss_pred             eeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceee
Confidence            345678999999999999865433  347999998753   2344578999999999999999999999998765 8899


Q ss_pred             EEeccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC
Q 003836          578 YEFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~  656 (792)
                      +||+++++|.+++... ..+++..+..++.||+.||.|||+.   +|+|+||||+|||++.++.+||+|||+++......
T Consensus        99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~  175 (291)
T 1u46_A           99 TELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND  175 (291)
T ss_dssp             EECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCC-C
T ss_pred             EecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccccccccc
Confidence            9999999999999764 5688999999999999999999998   99999999999999999999999999998765433


Q ss_pred             CC--ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhh
Q 003836          657 SH--TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVE  733 (792)
Q Consensus       657 ~~--~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  733 (792)
                      ..  ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||........   .             ..+..
T Consensus       176 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~---~-------------~~~~~  239 (291)
T 1u46_A          176 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI---L-------------HKIDK  239 (291)
T ss_dssp             CEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH---H-------------HHHHT
T ss_pred             cchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHH---H-------------HHHHc
Confidence            22  1223457888999999998889999999999999999999 9999965432110   0             01111


Q ss_pred             chhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          734 NDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       734 ~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                      .......+...+..+.+++.+||+.+|++|||+.++++.|+++..
T Consensus       240 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  284 (291)
T 1u46_A          240 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP  284 (291)
T ss_dssp             SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             cCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence            111111223455778999999999999999999999999988643

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=1e-37  Score=338.59  Aligned_cols=264  Identities=22%  Similarity=0.327  Sum_probs=205.9

Q ss_pred             CHHHHHHHHhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcc--cCCCCcccccceeccC
Q 003836          494 TYKELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQ--THHKNLVRLLGYCDEG  571 (792)
Q Consensus       494 ~~~el~~~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~--l~h~niv~l~g~~~~~  571 (792)
                      ...+.....+.+.+.||+|+||.||+|+..   ++.||||++...   ....+.+|++++..  ++||||+++++++...
T Consensus        35 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~---~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~  108 (342)
T 1b6c_B           35 LVQRTIARTIVLQESIGKGRFGEVWRGKWR---GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKD  108 (342)
T ss_dssp             HHHHHHHHHCEEEEEEEEETTEEEEEEEET---TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECC
T ss_pred             eecccccccEEEEeeecCCCCcEEEEEEEc---CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeeccc
Confidence            344555566677789999999999999763   678999998643   35677888888877  7999999999999877


Q ss_pred             C----ceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHh--------hccCCCeEecCCCCCcEEEcCCC
Q 003836          572 Q----NRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLH--------EECCTQIIHCDIKPQNILLDDHY  639 (792)
Q Consensus       572 ~----~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivH~dikp~NILl~~~~  639 (792)
                      .    ..++||||+++|+|.+++.. ..+++..+..++.||+.||+|||        +.   +|+||||||+|||++.++
T Consensus       109 ~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~  184 (342)
T 1b6c_B          109 NGTWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNG  184 (342)
T ss_dssp             CSSCCCEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTS
T ss_pred             CCccceeEEEEeecCCCcHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCC
Confidence            6    78999999999999999965 46889999999999999999999        66   999999999999999999


Q ss_pred             CeEEeecCCCccccCCCCC---ccccccccCCcccccccccC------CCCcccceehHHHHHHHHHhc----------C
Q 003836          640 NARISDFGLAKLLTLDQSH---TNTAIRGTKGYVAPEWFRNM------PITVKVDVYSYGVLLLEIICL----------R  700 (792)
Q Consensus       640 ~~kl~Dfg~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~k~DV~S~Gv~l~el~tg----------~  700 (792)
                      .+||+|||+++........   ......||+.|+|||.+.+.      .++.++||||||+++|||++|          +
T Consensus       185 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~  264 (342)
T 1b6c_B          185 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ  264 (342)
T ss_dssp             CEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred             CEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccc
Confidence            9999999999876543322   22345689999999998765      344789999999999999999          6


Q ss_pred             cCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc-----CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhcc
Q 003836          701 RNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM-----NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEG  775 (792)
Q Consensus       701 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~  775 (792)
                      .||.........  ...+. .        .+........     ...+....+.+++.+||+.||++|||++||+++|+.
T Consensus       265 ~p~~~~~~~~~~--~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~  333 (342)
T 1b6c_B          265 LPYYDLVPSDPS--VEEMR-K--------VVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ  333 (342)
T ss_dssp             CTTTTTSCSSCC--HHHHH-H--------HHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred             cCccccCcCccc--HHHHH-H--------HHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence            676543211100  00000 0        0111111111     123567889999999999999999999999999987


Q ss_pred             CcC
Q 003836          776 VVE  778 (792)
Q Consensus       776 ~~~  778 (792)
                      +.+
T Consensus       334 i~~  336 (342)
T 1b6c_B          334 LSQ  336 (342)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            643

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=8.4e-38  Score=341.86  Aligned_cols=259  Identities=22%  Similarity=0.296  Sum_probs=198.4

Q ss_pred             HhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccC-----CCCcccccceeccCCceEE
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH-----HKNLVRLLGYCDEGQNRLL  576 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-----h~niv~l~g~~~~~~~~~l  576 (792)
                      .+.+.++||+|+||+||+|... .+++.||||++... ......+..|+.++++++     ||||+++++++...+..++
T Consensus        36 ~y~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~l  113 (360)
T 3llt_A           36 AFLVIRKMGDGTFGRVLLCQHI-DNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCL  113 (360)
T ss_dssp             TEEEEEEEEECSSEEEEEEEET-TTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEE
T ss_pred             EEEEEEEEcccCCeEEEEEEEC-CCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEE
Confidence            3445688999999999999764 45679999998753 334567788999998886     9999999999999999999


Q ss_pred             EEEeccCCCccccccCCC--CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC-----------------
Q 003836          577 VYEFMSNGTVASFLFGDS--KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD-----------------  637 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~-----------------  637 (792)
                      ||||+ +++|.+++....  .+++..+..++.||+.||+|||+.   +|+||||||+|||++.                 
T Consensus       114 v~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~  189 (360)
T 3llt_A          114 IFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITVRRVTDGK  189 (360)
T ss_dssp             EECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEEECTTTCC
T ss_pred             EEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccchhcccccc
Confidence            99999 899999997653  588999999999999999999998   9999999999999975                 


Q ss_pred             --------CCCeEEeecCCCccccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhh
Q 003836          638 --------HYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISK  709 (792)
Q Consensus       638 --------~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~  709 (792)
                              ++.+||+|||+++.....    .....||+.|+|||.+.+..++.++|||||||++|||++|+.||......
T Consensus       190 ~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~  265 (360)
T 3llt_A          190 KIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHM  265 (360)
T ss_dssp             EEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             cccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHH
Confidence                    789999999999864332    23456899999999999999999999999999999999999999764332


Q ss_pred             hhhhhHHH--------HHHHhhcccchhHhhh-chhccc--------------------CCHHHHHHHHHHHHHccccCC
Q 003836          710 VDKAILTD--------WAYDRYQERTLEALVE-NDLEAM--------------------NNVTMLHRFVMVAFWCIQEDP  760 (792)
Q Consensus       710 ~~~~~~~~--------~~~~~~~~~~~~~~~~-~~~~~~--------------------~~~~~~~~l~~l~~~Cl~~~p  760 (792)
                      .....+..        +....... .....+. ......                    ......+.+.+++.+||+.||
T Consensus       266 ~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  344 (360)
T 3llt_A          266 EHLAMMESIIQPIPKNMLYEATKT-NGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDP  344 (360)
T ss_dssp             HHHHHHHHHTCCCCHHHHHHHTTS-GGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSG
T ss_pred             HHHHHHHHhcCCCCHHHHhhhhhc-cCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCCh
Confidence            21111100        00000000 0000000 000000                    000112668899999999999


Q ss_pred             CCCCCHHhHHH
Q 003836          761 SHRPTMRKVTQ  771 (792)
Q Consensus       761 ~~RPs~~evl~  771 (792)
                      ++|||++|+++
T Consensus       345 ~~Rpta~elL~  355 (360)
T 3llt_A          345 TLRPSPAELLK  355 (360)
T ss_dssp             GGSCCHHHHTT
T ss_pred             hhCCCHHHHhc
Confidence            99999999986

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=3.9e-38  Score=331.50  Aligned_cols=246  Identities=27%  Similarity=0.366  Sum_probs=194.3

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccC-CceEEEEEec
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEG-QNRLLVYEFM  581 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~-~~~~lV~E~~  581 (792)
                      +.+.+.||+|+||+||++...   ++.||||++...  ...+.+.+|++++++++||||+++++++.+. +..++||||+
T Consensus        23 y~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~   97 (278)
T 1byg_A           23 LKLLQTIGKGEFGDVMLGDYR---GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM   97 (278)
T ss_dssp             EEEEEEEEECSSCEEEEEEET---TEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred             ceEEeEEecCCCceEEEEEEc---CCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecC
Confidence            345578999999999999753   578999999753  3567899999999999999999999997554 4789999999


Q ss_pred             cCCCccccccCCC--CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          582 SNGTVASFLFGDS--KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       582 ~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      ++++|.+++....  .+++..+..++.|++.||+|||+.   +|+||||||+|||++.++.+||+|||+++......   
T Consensus        98 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~---  171 (278)
T 1byg_A           98 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ---  171 (278)
T ss_dssp             TTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred             CCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccccc---
Confidence            9999999997653  378899999999999999999998   99999999999999999999999999998654321   


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                       ....+++.|+|||.+.+..++.++||||||+++|||++ |+.||........                 ...+......
T Consensus       172 -~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~-----------------~~~~~~~~~~  233 (278)
T 1byg_A          172 -DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV-----------------VPRVEKGYKM  233 (278)
T ss_dssp             -----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGH-----------------HHHHTTTCCC
T ss_pred             -cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH-----------------HHHHhcCCCC
Confidence             22347889999999998999999999999999999998 9999865422110                 0001111112


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      ..+...+..+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus       234 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~  272 (278)
T 1byg_A          234 DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK  272 (278)
T ss_dssp             CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHH
Confidence            223344567889999999999999999999999998764

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=1.5e-37  Score=328.09  Aligned_cols=245  Identities=23%  Similarity=0.320  Sum_probs=203.2

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +.+.+.||+|+||.||++... .+++.||+|++....   ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus        16 y~~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   94 (284)
T 2vgo_A           16 FDIGRPLGKGKFGNVYLAREK-QNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLE   94 (284)
T ss_dssp             EEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ceeeheecCCCCeEEEEEEEc-CCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEE
Confidence            345578999999999999754 456789999986532   2335689999999999999999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      |+++++|.+++.....+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||++......   .
T Consensus        95 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~---~  168 (284)
T 2vgo_A           95 FAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL---R  168 (284)
T ss_dssp             CCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSS---C
T ss_pred             eCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCccc---c
Confidence            999999999998777899999999999999999999998   9999999999999999999999999999765432   2


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      .....|++.|+|||.+.+..++.++||||||+++|||++|+.||.........                ..+....  ..
T Consensus       169 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~----------------~~~~~~~--~~  230 (284)
T 2vgo_A          169 RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETH----------------RRIVNVD--LK  230 (284)
T ss_dssp             BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH----------------HHHHTTC--CC
T ss_pred             cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHH----------------HHHhccc--cC
Confidence            23456899999999999999999999999999999999999999754322110                0011111  11


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .+...+..+.+++.+||+.||.+||+++|+++.
T Consensus       231 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h  263 (284)
T 2vgo_A          231 FPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH  263 (284)
T ss_dssp             CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred             CCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence            222345678899999999999999999999863

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=4.6e-38  Score=340.47  Aligned_cols=268  Identities=25%  Similarity=0.364  Sum_probs=193.1

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHH--HHHHHhcccCCCCccccccee-----ccCCceEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFK--AEVNGIGQTHHKNLVRLLGYC-----DEGQNRLL  576 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~--~Ei~~l~~l~h~niv~l~g~~-----~~~~~~~l  576 (792)
                      .+.+.||+|+||.||+|+.   +++.||||++...   ....+.  .|+..+..++|+||+++++.+     ......++
T Consensus        16 ~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~l   89 (336)
T 3g2f_A           16 KLLELIGRGRYGAVYKGSL---DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLL   89 (336)
T ss_dssp             EEEEEEEECSSEEEEEEEE---TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred             heeeecccCCCeEEEEEEE---CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEE
Confidence            3457899999999999975   3578999998643   233344  444445668999999999744     33346789


Q ss_pred             EEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccC------CCeEecCCCCCcEEEcCCCCeEEeecCCCc
Q 003836          577 VYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECC------TQIIHCDIKPQNILLDDHYNARISDFGLAK  650 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~------~~ivH~dikp~NILl~~~~~~kl~Dfg~a~  650 (792)
                      ||||+++|+|.+++.... .++..+.+++.||++||+|||+.+.      .+|+||||||+|||++.++.+||+|||+++
T Consensus        90 v~e~~~~g~L~~~l~~~~-~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~  168 (336)
T 3g2f_A           90 VMEYYPNGSLXKYLSLHT-SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSM  168 (336)
T ss_dssp             EECCCTTCBHHHHHHHCC-BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCE
T ss_pred             EEecCCCCcHHHHHhhcc-cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeecccee
Confidence            999999999999996543 4888999999999999999998632      389999999999999999999999999998


Q ss_pred             cccCCCC-------CccccccccCCccccccccc-------CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhh-hhH
Q 003836          651 LLTLDQS-------HTNTAIRGTKGYVAPEWFRN-------MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDK-AIL  715 (792)
Q Consensus       651 ~~~~~~~-------~~~~~~~gt~~y~aPE~~~~-------~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~-~~~  715 (792)
                      .......       .......||+.|+|||.+.+       ..++.++|||||||++|||++|+.|+......... ...
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~  248 (336)
T 3g2f_A          169 RLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAF  248 (336)
T ss_dssp             ECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTT
T ss_pred             ecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhh
Confidence            7654321       11224469999999999976       46778999999999999999998877543221110 000


Q ss_pred             HHHHHHhhcccchhHhhh-chhccc------CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          716 TDWAYDRYQERTLEALVE-NDLEAM------NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       716 ~~~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                      ...............++. ......      .....+..+.+++.+||+.||++|||++|+++.|+++++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~  318 (336)
T 3g2f_A          249 QTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMM  318 (336)
T ss_dssp             HHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHH
Confidence            000000000000001110 111111      123466789999999999999999999999999988753

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=1.6e-37  Score=365.22  Aligned_cols=245  Identities=25%  Similarity=0.336  Sum_probs=204.3

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccc---cccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV---FQDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      .+.++||+|+||.||++... .+++.||||++++.   .....+.+..|..++..+ +|++|+++++++.+.+..+||||
T Consensus       344 ~~~~~LG~G~fG~V~~~~~~-~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E  422 (674)
T 3pfq_A          344 NFLMVLGKGSFGKVMLSERK-GTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME  422 (674)
T ss_dssp             EEEEESSBTTTBCEEEEEES-SSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEE
T ss_pred             EEEEEEccCCCEEEEEEEEC-CCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEe
Confidence            34578999999999999754 56778999999753   234456788999999987 79999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      |+++|+|.+++.....+++..+..++.||+.||+|||++   +|+||||||+||||+.++.+||+|||+++...... ..
T Consensus       423 ~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~-~~  498 (674)
T 3pfq_A          423 YVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG-VT  498 (674)
T ss_dssp             CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECCCTT-CC
T ss_pred             CcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccccCC-cc
Confidence            999999999998878899999999999999999999999   99999999999999999999999999998643322 23


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      .....||+.|+|||++.+..++.++|||||||+||||++|+.||........                ...++...  ..
T Consensus       499 ~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~----------------~~~i~~~~--~~  560 (674)
T 3pfq_A          499 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL----------------FQSIMEHN--VA  560 (674)
T ss_dssp             BCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----------------HHHHHSSC--CC
T ss_pred             cccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHH----------------HHHHHhCC--CC
Confidence            3456799999999999999999999999999999999999999976432211                11111111  11


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCH-----HhHHH
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTM-----RKVTQ  771 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~-----~evl~  771 (792)
                      .+...+.++.+|+..||+.||++||++     +||++
T Consensus       561 ~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~  597 (674)
T 3pfq_A          561 YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  597 (674)
T ss_dssp             CCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred             CCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence            233456788999999999999999998     77765

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.5e-38  Score=345.18  Aligned_cols=254  Identities=22%  Similarity=0.249  Sum_probs=203.6

Q ss_pred             hhhhhhcCccccceEEEeeecC--CCceEEEEEEccccc----ccchHHHHHHHHHhccc-CCCCcccccceeccCCceE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNM--GSSNHVAVKKLNSVF----QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRL  575 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~--~~~~~vavK~~~~~~----~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~  575 (792)
                      +.+.+.||+|+||+||++....  .+++.||||+++...    ....+.+.+|++++.++ +|+||+++++++.+.+..+
T Consensus        56 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~  135 (355)
T 1vzo_A           56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLH  135 (355)
T ss_dssp             EEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEE
T ss_pred             eEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEE
Confidence            3456789999999999997632  356899999987532    22345678899999999 6999999999999999999


Q ss_pred             EEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCC
Q 003836          576 LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD  655 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~  655 (792)
                      +||||+++|+|.+++.....+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus       136 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~  212 (355)
T 1vzo_A          136 LILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVAD  212 (355)
T ss_dssp             EEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEECCGG
T ss_pred             EEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCeecccC
Confidence            9999999999999998877899999999999999999999998   9999999999999999999999999999876544


Q ss_pred             CCCccccccccCCccccccccc--CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhh
Q 003836          656 QSHTNTAIRGTKGYVAPEWFRN--MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVE  733 (792)
Q Consensus       656 ~~~~~~~~~gt~~y~aPE~~~~--~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  733 (792)
                      .........||+.|+|||.+.+  ..++.++|||||||++|||++|+.||...........+..            .+..
T Consensus       213 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~------------~~~~  280 (355)
T 1vzo_A          213 ETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISR------------RILK  280 (355)
T ss_dssp             GGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHH------------HHHH
T ss_pred             CCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHH------------HHhc
Confidence            4444445679999999999975  4578999999999999999999999965432211111100            0010


Q ss_pred             chhcccCCHHHHHHHHHHHHHccccCCCCCC-----CHHhHHHHh
Q 003836          734 NDLEAMNNVTMLHRFVMVAFWCIQEDPSHRP-----TMRKVTQML  773 (792)
Q Consensus       734 ~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RP-----s~~evl~~L  773 (792)
                      .  ....+...+..+.+++.+||+.||.+||     +++|+++..
T Consensus       281 ~--~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~  323 (355)
T 1vzo_A          281 S--EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL  323 (355)
T ss_dssp             C--CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred             c--CCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence            0  1122334456788999999999999999     999998764

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=2.2e-37  Score=328.70  Aligned_cols=257  Identities=19%  Similarity=0.257  Sum_probs=201.6

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCccccccee-ccCCceEEEEEecc
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYC-DEGQNRLLVYEFMS  582 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~-~~~~~~~lV~E~~~  582 (792)
                      .+.+.||+|+||.||+|... .+++.||||++....  ..+++.+|+.++++++|++++..+..+ .+.+..++||||+ 
T Consensus        12 ~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-   87 (296)
T 3uzp_A           12 RLGRKIGSGSFGDIYLGTDI-AAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-   87 (296)
T ss_dssp             EEEEEEEEETTEEEEEEEET-TTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-
T ss_pred             EEEEEEccCCCeEEEEEEEc-CCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-
Confidence            34578999999999999753 457899999986533  335689999999999998877776666 5667789999999 


Q ss_pred             CCCccccccC-CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEE---cCCCCeEEeecCCCccccCCCCC
Q 003836          583 NGTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILL---DDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       583 ~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl---~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      +++|.+++.. ...+++..+..++.||+.||+|||++   +|+||||||+|||+   ++++.+||+|||+++........
T Consensus        88 ~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~  164 (296)
T 3uzp_A           88 GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH  164 (296)
T ss_dssp             CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred             CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccc
Confidence            8999999973 45789999999999999999999999   99999999999999   48899999999999876544331


Q ss_pred             ------ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhh
Q 003836          659 ------TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALV  732 (792)
Q Consensus       659 ------~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  732 (792)
                            ......||+.|+|||.+.+..++.++||||||+++|||++|+.||...........+.......... ...   
T Consensus       165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~---  240 (296)
T 3uzp_A          165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST-PIE---  240 (296)
T ss_dssp             CBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS-CHH---
T ss_pred             cccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCC-chH---
Confidence                  1234579999999999999999999999999999999999999997643221111111111110000 000   


Q ss_pred             hchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          733 ENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       733 ~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                        .    .....+.++.+++.+||+.||++|||+++|++.|+.+.
T Consensus       241 --~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~  279 (296)
T 3uzp_A          241 --V----LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF  279 (296)
T ss_dssp             --H----HTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred             --H----HHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHH
Confidence              0    01123467889999999999999999999999998865

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=6.6e-38  Score=338.57  Aligned_cols=263  Identities=22%  Similarity=0.323  Sum_probs=198.3

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccccc--chHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD--SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~--~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .+.+.||+|+||.||++... .+++.||||++......  ..+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus        28 ~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  106 (331)
T 4aaa_A           28 ENLGLVGEGSYGMVMKCRNK-DTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFV  106 (331)
T ss_dssp             EEEEEGGGGTTSSEEEEEET-TTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             eeeeEEeecCCEEEEEEEEC-CCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecC
Confidence            34578999999999999754 45679999998654332  3456889999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      ++++|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++....... ...
T Consensus       107 ~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~  182 (331)
T 4aaa_A          107 DHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE-VYD  182 (331)
T ss_dssp             SEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC------------
T ss_pred             CcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc-ccC
Confidence            9999999887778899999999999999999999999   999999999999999999999999999986543322 223


Q ss_pred             cccccCCcccccccccC-CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH-------HHHhhcc-cchhHhh
Q 003836          662 AIRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW-------AYDRYQE-RTLEALV  732 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~-------~~~~~~~-~~~~~~~  732 (792)
                      ...||+.|+|||.+.+. .++.++||||||+++|||++|+.||...............       ....+.. .......
T Consensus       183 ~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (331)
T 4aaa_A          183 DEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVR  262 (331)
T ss_dssp             -CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCC
T ss_pred             CCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccccccc
Confidence            34689999999998775 7899999999999999999999999765432211111000       0000000 0000000


Q ss_pred             hchhcccC-----CHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          733 ENDLEAMN-----NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       733 ~~~~~~~~-----~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .+......     ....++.+.+++.+||+.||++|||++|+++
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          263 LPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             CCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             CccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            00111111     1134577899999999999999999999986

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=5.7e-38  Score=343.22  Aligned_cols=263  Identities=21%  Similarity=0.317  Sum_probs=202.8

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      .+.+.||+|+||+||++... .+++.||+|++.... ....+.+.+|+.++++++||||+++++++.+++..++||||++
T Consensus        36 ~~~~~lg~G~~g~V~~~~~~-~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  114 (360)
T 3eqc_A           36 EKISELGAGNGGVVFKVSHK-PSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD  114 (360)
T ss_dssp             EEEEEEEECSSCEEEEEEET-TTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred             eeeeeecCCCCeEEEEEEEC-CCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCC
Confidence            34568999999999999754 456799999987643 3345679999999999999999999999999999999999999


Q ss_pred             CCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          583 NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       583 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      +++|.+++.....+++..+..++.|++.||+|||++  .+|+||||||+|||++.++.+||+|||+++.....   ....
T Consensus       115 ~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~  189 (360)
T 3eqc_A          115 GGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS  189 (360)
T ss_dssp             TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH---C---
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHh--CCEEcCCccHHHEEECCCCCEEEEECCCCcccccc---cccC
Confidence            999999998877899999999999999999999984  17999999999999999999999999999765322   1223


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHH----------------------HHH
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTD----------------------WAY  720 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~----------------------~~~  720 (792)
                      ..||+.|+|||.+.+..++.++||||||+++|||++|+.||..............                      +..
T Consensus       190 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (360)
T 3eqc_A          190 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGM  269 (360)
T ss_dssp             -CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------------------------
T ss_pred             CCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCccccccc
Confidence            4689999999999999999999999999999999999999976433211110000                      000


Q ss_pred             HhhcccchhHhhh----chhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          721 DRYQERTLEALVE----NDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       721 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ...........++    ...........+.++.+++.+||+.||++|||++|+++.
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  325 (360)
T 3eqc_A          270 DSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH  325 (360)
T ss_dssp             ----CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             CCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence            0000001111111    111111112245678999999999999999999999863

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=1.3e-37  Score=336.93  Aligned_cols=245  Identities=20%  Similarity=0.297  Sum_probs=202.9

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +.+.||+|+||.||++... .+++.+|+|++....   ....+.+.+|+.++++++|+||+++++++.+.+..++||||+
T Consensus        45 ~~~~lg~G~~g~Vy~~~~~-~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  123 (335)
T 2owb_A           45 RGRFLGKGGFAKCFEISDA-DTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELC  123 (335)
T ss_dssp             EEEEEEEETTEEEEEEEET-TTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             EEEEEeeCCCeEEEEEEEC-CCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecC
Confidence            4578999999999999754 456789999986542   234567899999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      ++++|.+++.....+++..+..++.||++||+|||++   +|+||||||+|||++.++.+||+|||+++....... ...
T Consensus       124 ~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-~~~  199 (335)
T 2owb_A          124 RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE-RKK  199 (335)
T ss_dssp             TTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC-CBC
T ss_pred             CCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccCcc-ccc
Confidence            9999999998778899999999999999999999999   999999999999999999999999999987643322 223


Q ss_pred             cccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCC
Q 003836          662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN  741 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  741 (792)
                      ...||+.|+|||.+.+..++.++||||||+++|||++|+.||..........   .             +....  ...+
T Consensus       200 ~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---~-------------~~~~~--~~~~  261 (335)
T 2owb_A          200 VLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL---R-------------IKKNE--YSIP  261 (335)
T ss_dssp             CCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH---H-------------HHHTC--CCCC
T ss_pred             ccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHH---H-------------HhcCC--CCCC
Confidence            4568999999999999899999999999999999999999997543221100   0             00000  0112


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          742 VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       742 ~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ......+.+++.+||+.||++|||++|+++.
T Consensus       262 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~~  292 (335)
T 2owb_A          262 KHINPVAASLIQKMLQTDPTARPTINELLND  292 (335)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred             ccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            2234567889999999999999999999974

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=4.3e-38  Score=343.03  Aligned_cols=259  Identities=14%  Similarity=0.157  Sum_probs=199.7

Q ss_pred             hhhhhhcCccccceEEEeeecCC-------CceEEEEEEcccccccchHHHHHHHHHhcccCCCCccc------------
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMG-------SSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVR------------  563 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~-------~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~------------  563 (792)
                      +.+.+.||+|+||.||+|.....       .++.||+|++...     +.+.+|++++++++||||++            
T Consensus        44 y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  118 (352)
T 2jii_A           44 WKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLA  118 (352)
T ss_dssp             EEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCS
T ss_pred             EEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCccC
Confidence            34567899999999999976542       3678999998653     46889999999999999998            


Q ss_pred             ---ccceecc-CCceEEEEEeccCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC
Q 003836          564 ---LLGYCDE-GQNRLLVYEFMSNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD  637 (792)
Q Consensus       564 ---l~g~~~~-~~~~~lV~E~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~  637 (792)
                         +++++.. ....++||||+ +++|.+++...  ..+++..+..|+.||+.||+|||++   +|+||||||+|||++.
T Consensus       119 i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl~~~  194 (352)
T 2jii_A          119 IPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIFVDP  194 (352)
T ss_dssp             CCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEEEET
T ss_pred             ccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEEcC
Confidence               4556654 67889999999 99999999875  6799999999999999999999999   9999999999999999


Q ss_pred             CC--CeEEeecCCCccccCCCCC------ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhh
Q 003836          638 HY--NARISDFGLAKLLTLDQSH------TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISK  709 (792)
Q Consensus       638 ~~--~~kl~Dfg~a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~  709 (792)
                      ++  .+||+|||+++........      ......||+.|+|||.+.+..++.++||||||+++|||++|+.||......
T Consensus       195 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~  274 (352)
T 2jii_A          195 EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPN  274 (352)
T ss_dssp             TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred             CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcC
Confidence            98  8999999999876543221      123357999999999999999999999999999999999999999765322


Q ss_pred             hhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          710 VDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       710 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      .....  .... ... .....+......   ....+.++.+++.+||+.||++|||+++|+++|++++
T Consensus       275 ~~~~~--~~~~-~~~-~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  335 (352)
T 2jii_A          275 TEDIM--KQKQ-KFV-DKPGPFVGPCGH---WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALL  335 (352)
T ss_dssp             HHHHH--HHHH-HHH-HSCCCEECTTSC---EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred             HHHHH--HHHH-hcc-CChhhhhhhccc---cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHH
Confidence            11110  0000 000 000000000000   0122467889999999999999999999999998865

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=1.9e-37  Score=327.49  Aligned_cols=241  Identities=20%  Similarity=0.276  Sum_probs=195.4

Q ss_pred             HhhhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEE
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~  578 (792)
                      .+.+.+.||+|+||+||++... .+++.||+|++....  .....++.+|+..+.++ +||||+++++++.+.+..++||
T Consensus        12 ~y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~   90 (289)
T 1x8b_A           12 EFHELEKIGSGEFGSVFKCVKR-LDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQN   90 (289)
T ss_dssp             HEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEE
T ss_pred             hhhhhhhhcCCCceEEEEEEEc-CCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            3445678999999999999754 456799999987532  33456788999999998 9999999999999999999999


Q ss_pred             EeccCCCccccccCC----CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC----------------
Q 003836          579 EFMSNGTVASFLFGD----SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH----------------  638 (792)
Q Consensus       579 E~~~~gsL~~~l~~~----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~----------------  638 (792)
                      ||+++++|.+++...    ..+++..+..++.||+.||+|||++   +|+||||||+|||++.+                
T Consensus        91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~  167 (289)
T 1x8b_A           91 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWA  167 (289)
T ss_dssp             ECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC------------------
T ss_pred             EecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccccccc
Confidence            999999999999764    5689999999999999999999999   99999999999999844                


Q ss_pred             ---CCeEEeecCCCccccCCCCCccccccccCCcccccccccC-CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhh
Q 003836          639 ---YNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAI  714 (792)
Q Consensus       639 ---~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~  714 (792)
                         ..+||+|||.++......     ...||+.|+|||.+.+. .++.++||||||+++|||++|..++......     
T Consensus       168 ~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~-----  237 (289)
T 1x8b_A          168 SNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQW-----  237 (289)
T ss_dssp             --CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHH-----
T ss_pred             CCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHH-----
Confidence               479999999998765332     23489999999999765 6778999999999999999998776433110     


Q ss_pred             HHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          715 LTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                            .......         ....+...+..+.+++.+||+.||++|||+.|+++
T Consensus       238 ------~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  279 (289)
T 1x8b_A          238 ------HEIRQGR---------LPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK  279 (289)
T ss_dssp             ------HHHHTTC---------CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ------HHHHcCC---------CCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence                  0000110         11122234567889999999999999999999998

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=6e-38  Score=339.32  Aligned_cols=251  Identities=22%  Similarity=0.307  Sum_probs=185.5

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccC-CCCccccccee--------ccCCc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH-HKNLVRLLGYC--------DEGQN  573 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~g~~--------~~~~~  573 (792)
                      +.+.++||+|+||.||++... .+++.||||++........+.+.+|+.++.++. ||||+++++++        .....
T Consensus        30 y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~  108 (337)
T 3ll6_A           30 LRVRRVLAEGGFAFVYEAQDV-GSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAE  108 (337)
T ss_dssp             EEEEEEEECCSSEEEEEEEET-TTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEE
T ss_pred             EEEEEEEccCCceEEEEEEEC-CCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCce
Confidence            445678999999999999753 456799999987665666778999999999996 99999999998        34445


Q ss_pred             eEEEEEeccCCCccccccC---CCCCchhHHHHHHHHHHHHHHHHhhccCCC--eEecCCCCCcEEEcCCCCeEEeecCC
Q 003836          574 RLLVYEFMSNGTVASFLFG---DSKPNWKLRTEIAMGIAGGLFYLHEECCTQ--IIHCDIKPQNILLDDHYNARISDFGL  648 (792)
Q Consensus       574 ~~lV~E~~~~gsL~~~l~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivH~dikp~NILl~~~~~~kl~Dfg~  648 (792)
                      .++||||++ |+|.+++..   ...+++..+..++.||+.||+|||+.   +  |+||||||+|||++.++.+||+|||+
T Consensus       109 ~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~  184 (337)
T 3ll6_A          109 FLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCDFGS  184 (337)
T ss_dssp             EEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCCCTT
T ss_pred             EEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEecCcc
Confidence            789999996 699888864   45689999999999999999999998   8  99999999999999999999999999


Q ss_pred             CccccCCCCCc-----------cccccccCCccccccc---ccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhh
Q 003836          649 AKLLTLDQSHT-----------NTAIRGTKGYVAPEWF---RNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAI  714 (792)
Q Consensus       649 a~~~~~~~~~~-----------~~~~~gt~~y~aPE~~---~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~  714 (792)
                      ++.........           .....||+.|+|||.+   .+..++.++||||||+++|||++|+.||.......    
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~----  260 (337)
T 3ll6_A          185 ATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR----  260 (337)
T ss_dssp             CBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------
T ss_pred             ceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH----
Confidence            98765432211           1134589999999998   56778999999999999999999999996432110    


Q ss_pred             HHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          715 LTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                                      +................+.+++.+||+.||++|||++|+++.|+.+..
T Consensus       261 ----------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~  308 (337)
T 3ll6_A          261 ----------------IVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA  308 (337)
T ss_dssp             ---------------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ----------------hhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence                            000111111111223457789999999999999999999999988653

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=2.6e-37  Score=342.26  Aligned_cols=243  Identities=22%  Similarity=0.279  Sum_probs=188.3

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcc-cCCCCcccccceecc----CCceEEEEEec
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQ-THHKNLVRLLGYCDE----GQNRLLVYEFM  581 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~-l~h~niv~l~g~~~~----~~~~~lV~E~~  581 (792)
                      +.||+|+||+||++.. ..+++.||||++..     ...+.+|+.++.+ .+||||+++++++..    ....+|||||+
T Consensus        68 ~~LG~G~~g~V~~~~~-~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~  141 (400)
T 1nxk_A           68 QVLGLGINGKVLQIFN-KRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL  141 (400)
T ss_dssp             EEEEEETTEEEEEEEE-TTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred             ceeeeccCeEEEEEEE-CCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeC
Confidence            5799999999999975 45678999999864     2467788888754 589999999998865    56789999999


Q ss_pred             cCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC---CCCeEEeecCCCccccCCC
Q 003836          582 SNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD---HYNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       582 ~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~---~~~~kl~Dfg~a~~~~~~~  656 (792)
                      ++|+|.+++...  ..+++..+..|+.||+.||.|||+.   +|+||||||+|||++.   ++.+||+|||+++......
T Consensus       142 ~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~  218 (400)
T 1nxk_A          142 DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN  218 (400)
T ss_dssp             CSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC---
T ss_pred             CCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccccccCCCC
Confidence            999999999765  3589999999999999999999998   9999999999999997   7899999999998654322


Q ss_pred             CCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          657 SHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       657 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                        ......||+.|+|||++.+..++.++|||||||++|||++|+.||.............            ..+.....
T Consensus       219 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~------------~~i~~~~~  284 (400)
T 1nxk_A          219 --SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK------------TRIRMGQY  284 (400)
T ss_dssp             ----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHH------------HHHHHTCC
T ss_pred             --ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHH------------HHHHcCcc
Confidence              2334568999999999999999999999999999999999999997543221100000            00000000


Q ss_pred             c--ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          737 E--AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       737 ~--~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .  .......+.++.+++.+||+.||++|||++|+++.
T Consensus       285 ~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  322 (400)
T 1nxk_A          285 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  322 (400)
T ss_dssp             CCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             cCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            0  00012345678899999999999999999999985

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=3e-38  Score=347.61  Aligned_cols=235  Identities=14%  Similarity=0.141  Sum_probs=183.6

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccc---cccchHHHHHHH---HHhcccCCCCccccc-------ceeccC
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV---FQDSEKEFKAEV---NGIGQTHHKNLVRLL-------GYCDEG  571 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei---~~l~~l~h~niv~l~-------g~~~~~  571 (792)
                      +.+.||+|+||+||+|... .+++.||||++...   .....+.+.+|+   +.+++++||||++++       +++.+.
T Consensus        77 ~~~~lG~G~~g~V~~a~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~  155 (377)
T 3byv_A           77 RGTVLGQEDPYAYLEATDQ-ETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDP  155 (377)
T ss_dssp             EEEEEEEETTEEEEEEEC--CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECT
T ss_pred             EcceeecCCCEEEEEEEEC-CCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhcc
Confidence            3578999999999999753 45679999998742   334457899999   566667899999999       444443


Q ss_pred             C-----------------ceEEEEEeccCCCccccccCCCCC-------chhHHHHHHHHHHHHHHHHhhccCCCeEecC
Q 003836          572 Q-----------------NRLLVYEFMSNGTVASFLFGDSKP-------NWKLRTEIAMGIAGGLFYLHEECCTQIIHCD  627 (792)
Q Consensus       572 ~-----------------~~~lV~E~~~~gsL~~~l~~~~~l-------~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~d  627 (792)
                      +                 ..+|||||+ +|+|.+++.....+       ++..+..|+.||+.||+|||++   +|+|||
T Consensus       156 ~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrD  231 (377)
T 3byv_A          156 QKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTY  231 (377)
T ss_dssp             TSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSC
T ss_pred             CCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCC
Confidence            2                 378999999 68999999764333       3588889999999999999999   999999


Q ss_pred             CCCCcEEEcCCCCeEEeecCCCccccCCCCCccccccccCCcccccccccC-----------CCCcccceehHHHHHHHH
Q 003836          628 IKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM-----------PITVKVDVYSYGVLLLEI  696 (792)
Q Consensus       628 ikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~k~DV~S~Gv~l~el  696 (792)
                      |||+|||++.++.+||+|||+++....    ......| +.|+|||.+.+.           .++.++|||||||++|||
T Consensus       232 ikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~el  306 (377)
T 3byv_A          232 LRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWI  306 (377)
T ss_dssp             CCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHH
T ss_pred             CCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHH
Confidence            999999999999999999999985322    2334567 999999999887           899999999999999999


Q ss_pred             HhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          697 ICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       697 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ++|+.||........                ...+...      ....+.++.+++.+||+.||++|||+.|+++
T Consensus       307 ltg~~Pf~~~~~~~~----------------~~~~~~~------~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  359 (377)
T 3byv_A          307 WCADLPITKDAALGG----------------SEWIFRS------CKNIPQPVRALLEGFLRYPKEDRLLPLQAME  359 (377)
T ss_dssp             HHSSCCC------CC----------------SGGGGSS------CCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred             HHCCCCCcccccccc----------------hhhhhhh------ccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence            999999965322110                0111110      0123467889999999999999999999986

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=4.3e-37  Score=334.53  Aligned_cols=253  Identities=21%  Similarity=0.334  Sum_probs=199.4

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccc-----------------hHHHHHHHHHhcccCCCCccccc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS-----------------EKEFKAEVNGIGQTHHKNLVRLL  565 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~Ei~~l~~l~h~niv~l~  565 (792)
                      +.+.+.||+|+||.||++..   +++.||||++.......                 .+.+.+|+.++++++||||++++
T Consensus        33 y~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~  109 (348)
T 2pml_X           33 YRIIRTLNQGKFNKIILCEK---DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE  109 (348)
T ss_dssp             EEEEEEEECCSSCCEEEEEE---TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred             eEEEEEEcCCCCeEEEEEEc---CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence            34557899999999999976   57899999987532211                 18899999999999999999999


Q ss_pred             ceeccCCceEEEEEeccCCCcccc------ccC--CCCCchhHHHHHHHHHHHHHHHHhh-ccCCCeEecCCCCCcEEEc
Q 003836          566 GYCDEGQNRLLVYEFMSNGTVASF------LFG--DSKPNWKLRTEIAMGIAGGLFYLHE-ECCTQIIHCDIKPQNILLD  636 (792)
Q Consensus       566 g~~~~~~~~~lV~E~~~~gsL~~~------l~~--~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~dikp~NILl~  636 (792)
                      +++.+.+..++||||+++++|.++      +..  ...+++..+..++.||+.||.|||+ .   +|+|+||||+|||++
T Consensus       110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~~  186 (348)
T 2pml_X          110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILMD  186 (348)
T ss_dssp             EEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEEC
T ss_pred             EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEEc
Confidence            999999999999999999999999      665  4678999999999999999999999 7   999999999999999


Q ss_pred             CCCCeEEeecCCCccccCCCCCccccccccCCcccccccccC-CCCc-ccceehHHHHHHHHHhcCcCCCcchhhhhhhh
Q 003836          637 DHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM-PITV-KVDVYSYGVLLLEIICLRRNIDNEISKVDKAI  714 (792)
Q Consensus       637 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~  714 (792)
                      .++.+||+|||+++.....   ......|++.|+|||.+.+. .++. ++||||||+++|||++|+.||.........  
T Consensus       187 ~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--  261 (348)
T 2pml_X          187 KNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVEL--  261 (348)
T ss_dssp             TTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHH--
T ss_pred             CCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH--
Confidence            9999999999999876433   23345689999999999877 6766 999999999999999999999764331110  


Q ss_pred             HHHHHHHhhcccchh------Hhhhc---hhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          715 LTDWAYDRYQERTLE------ALVEN---DLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       715 ~~~~~~~~~~~~~~~------~~~~~---~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .     .........      .....   ..........+..+.+++.+||+.||.+|||++|+++
T Consensus       262 ~-----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          262 F-----NNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             H-----HHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             H-----HHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            0     000000000      00000   0000001234567899999999999999999999997

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=6.1e-37  Score=330.75  Aligned_cols=257  Identities=19%  Similarity=0.271  Sum_probs=196.8

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccC-CCCcccccceecc--CCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH-HKNLVRLLGYCDE--GQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~g~~~~--~~~~~lV~E  579 (792)
                      +.+.+.||+|+||+||+|... .+++.||||+++.   ...+.+.+|++++++++ ||||+++++++.+  ....++|||
T Consensus        38 y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~---~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e  113 (330)
T 3nsz_A           38 YQLVRKLGRGKYSEVFEAINI-TNNEKVVVKILKP---VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE  113 (330)
T ss_dssp             EEEEEEEEECSSEEEEEEEET-TTCCEEEEEEECS---CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEE
T ss_pred             eEEEEEecccCCeEEEEEEEC-CCCcEEEEEEecc---cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEe
Confidence            345678999999999999653 4567999999874   34578999999999997 9999999999987  667899999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCC-CeEEeecCCCccccCCCCC
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY-NARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~-~~kl~Dfg~a~~~~~~~~~  658 (792)
                      |+++++|.+++.   .+++..+..++.||+.||+|||+.   +|+||||||+|||++.++ .+||+|||+++....... 
T Consensus       114 ~~~~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~-  186 (330)
T 3nsz_A          114 HVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-  186 (330)
T ss_dssp             CCCCCCHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC-
T ss_pred             ccCchhHHHHHH---hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc-
Confidence            999999999984   488899999999999999999998   999999999999999776 899999999987653322 


Q ss_pred             ccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhH-H---------HHHHHhh--cc
Q 003836          659 TNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAIL-T---------DWAYDRY--QE  725 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~-~---------~~~~~~~--~~  725 (792)
                       .....+++.|+|||.+.+ ..++.++|||||||++|||++|+.||.......+.... .         .+.....  ..
T Consensus       187 -~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  265 (330)
T 3nsz_A          187 -YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD  265 (330)
T ss_dssp             -CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCC
T ss_pred             -cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccc
Confidence             234468999999999877 67999999999999999999999999554322111100 0         0000000  00


Q ss_pred             cchhHhhhc--------hhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          726 RTLEALVEN--------DLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       726 ~~~~~~~~~--------~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .........        ..........+.++.+++.+||+.||++|||++|+++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          266 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             THHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             cchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            000000000        0011111224578899999999999999999999998

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=2.7e-37  Score=327.81  Aligned_cols=245  Identities=24%  Similarity=0.318  Sum_probs=195.8

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCCCc
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTV  586 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~gsL  586 (792)
                      ..||+|+||.||+|... .+++.||||++........+.+.+|+.++++++||||+++++++.+.+..++||||+++++|
T Consensus        28 ~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L  106 (295)
T 2clq_A           28 VVLGKGTYGIVYAGRDL-SNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSL  106 (295)
T ss_dssp             CEEEECSSSEEEEEEET-TTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEH
T ss_pred             EEEeecCcEEEEEEEEC-CCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCH
Confidence            47999999999999753 45679999999876666678899999999999999999999999999999999999999999


Q ss_pred             cccccCC---CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC-CCCeEEeecCCCccccCCCCCcccc
Q 003836          587 ASFLFGD---SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD-HYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       587 ~~~l~~~---~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~-~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      .+++...   ...++..+..++.||+.||.|||+.   +|+|+||||+|||++. ++.+||+|||+++...... .....
T Consensus       107 ~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~-~~~~~  182 (295)
T 2clq_A          107 SALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-PCTET  182 (295)
T ss_dssp             HHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC------CC
T ss_pred             HHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCC-Ccccc
Confidence            9999754   2456888999999999999999998   9999999999999987 8999999999998764322 12234


Q ss_pred             ccccCCcccccccccCC--CCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          663 IRGTKGYVAPEWFRNMP--ITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~--~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ..|++.|+|||.+.+..  ++.++||||||+++|||++|+.||...........  .             ..........
T Consensus       183 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~--~-------------~~~~~~~~~~  247 (295)
T 2clq_A          183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMF--K-------------VGMFKVHPEI  247 (295)
T ss_dssp             CCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHH--H-------------HHHHCCCCCC
T ss_pred             cCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHH--h-------------hccccccccc
Confidence            56899999999997643  88999999999999999999999964322111000  0             0000111122


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      +...+.++.+++.+||+.||++||+++|+++
T Consensus       248 ~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          248 PESMSAEAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             CTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             cccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            3344567889999999999999999999986

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=4.5e-38  Score=331.03  Aligned_cols=250  Identities=22%  Similarity=0.291  Sum_probs=198.5

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceec--cCCceEEEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCD--EGQNRLLVYE  579 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~--~~~~~~lV~E  579 (792)
                      .+.+.||+|+||.||++... .+++.||+|++....  ....+.+.+|++++++++||||+++++++.  .....++|||
T Consensus         9 ~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e   87 (279)
T 2w5a_A            9 EVLYTIGTGSYGRCQKIRRK-SDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVME   87 (279)
T ss_dssp             EEEEEEEECSSSEEEEEEET-TTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEE
T ss_pred             eeehhccCCCCcEEEEEEEC-CCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEe
Confidence            34578999999999999754 456899999987532  334567999999999999999999999874  4678899999


Q ss_pred             eccCCCccccccCC----CCCchhHHHHHHHHHHHHHHHHhhccCCC-----eEecCCCCCcEEEcCCCCeEEeecCCCc
Q 003836          580 FMSNGTVASFLFGD----SKPNWKLRTEIAMGIAGGLFYLHEECCTQ-----IIHCDIKPQNILLDDHYNARISDFGLAK  650 (792)
Q Consensus       580 ~~~~gsL~~~l~~~----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-----ivH~dikp~NILl~~~~~~kl~Dfg~a~  650 (792)
                      |+++++|.+++...    ..+++..+..++.||+.||+|||+.   +     |+||||||+|||++.++.+||+|||+++
T Consensus        88 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~  164 (279)
T 2w5a_A           88 YCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR  164 (279)
T ss_dssp             CCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred             CCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence            99999999999653    3489999999999999999999998   7     9999999999999999999999999998


Q ss_pred             cccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhH
Q 003836          651 LLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEA  730 (792)
Q Consensus       651 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  730 (792)
                      ....... ......|++.|+|||.+.+..++.++||||||+++|||++|+.||........   .     .......   
T Consensus       165 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~-----~~i~~~~---  232 (279)
T 2w5a_A          165 ILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL---A-----GKIREGK---  232 (279)
T ss_dssp             HC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---H-----HHHHHTC---
T ss_pred             eeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHH---H-----HHHhhcc---
Confidence            7543221 12234689999999999998999999999999999999999999975432110   0     0000000   


Q ss_pred             hhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhcc
Q 003836          731 LVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEG  775 (792)
Q Consensus       731 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~  775 (792)
                            ....+...+.++.+++.+||+.||++||+++||++.+..
T Consensus       233 ------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~  271 (279)
T 2w5a_A          233 ------FRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI  271 (279)
T ss_dssp             ------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             ------cccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhh
Confidence                  111222345678899999999999999999999987644

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=4.4e-38  Score=338.87  Aligned_cols=262  Identities=20%  Similarity=0.278  Sum_probs=191.6

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccccc-chHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD-SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      .+.+.||+|+||+||+|... .+++.||+|++...... ....+.+|++++++++||||+++++++.+.+..++||||++
T Consensus         5 ~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   83 (324)
T 3mtl_A            5 IKLDKLGEGTYATVYKGKSK-LTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD   83 (324)
T ss_dssp             EEEEEEEECSSEEEEEEEET-TTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS
T ss_pred             EEEEEEcCCCCEEEEEEEEC-CCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc
Confidence            34578999999999999754 45679999998754322 12245679999999999999999999999999999999998


Q ss_pred             CCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          583 NGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       583 ~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                       |+|.+++... ..+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++...... ....
T Consensus        84 -~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-~~~~  158 (324)
T 3mtl_A           84 -KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT-KTYD  158 (324)
T ss_dssp             -EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC---------
T ss_pred             -cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCc-cccc
Confidence             5888888654 4689999999999999999999998   99999999999999999999999999998654322 2223


Q ss_pred             cccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhc------
Q 003836          662 AIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEN------  734 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  734 (792)
                      ...||+.|+|||.+.+ ..++.++|||||||++|||++|+.||...........+.... ..............      
T Consensus       159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~  237 (324)
T 3mtl_A          159 NEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRIL-GTPTEETWPGILSNEEFKTY  237 (324)
T ss_dssp             ----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH-CCCCTTTSTTGGGCHHHHHT
T ss_pred             cccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh-CCCChHhchhhhcchhhccc
Confidence            3468999999999876 578999999999999999999999997654322111111100 00000000000000      


Q ss_pred             ---hhcc----cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          735 ---DLEA----MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       735 ---~~~~----~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                         ....    ........++.+++.+||+.||++|||++|+++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  282 (324)
T 3mtl_A          238 NYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH  282 (324)
T ss_dssp             CCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             ccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence               0000    0011234678899999999999999999999873

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=2e-37  Score=339.56  Aligned_cols=246  Identities=20%  Similarity=0.204  Sum_probs=197.8

Q ss_pred             hhhhhcCccccceEEEeee----cCCCceEEEEEEcccccccchHHHHHHHHHhcccC---CCCcccccceeccCCceEE
Q 003836          504 GFKEELGRGAFGTVYKGFV----NMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH---HKNLVRLLGYCDEGQNRLL  576 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~----~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~---h~niv~l~g~~~~~~~~~l  576 (792)
                      .+.+.||+|+||+||+|..    +...++.||||++...   ...++.+|++++.+++   |+||+++++++...+..++
T Consensus        68 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~l  144 (365)
T 3e7e_A           68 YVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVL  144 (365)
T ss_dssp             EEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEE
T ss_pred             EEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEE
Confidence            3457899999999999952    3345678999998753   3557778888877776   9999999999999999999


Q ss_pred             EEEeccCCCccccccC-----CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC-----------CCC
Q 003836          577 VYEFMSNGTVASFLFG-----DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD-----------HYN  640 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~-----------~~~  640 (792)
                      ||||+++|+|.+++..     ...+++..+..|+.||+.||+|||+.   +|+||||||+||||+.           ++.
T Consensus       145 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~~~~~~  221 (365)
T 3e7e_A          145 VGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDDLSAG  221 (365)
T ss_dssp             EECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC------CTT
T ss_pred             EEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccccccccCC
Confidence            9999999999999973     45789999999999999999999998   9999999999999998           899


Q ss_pred             eEEeecCCCccccCC-CCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHH
Q 003836          641 ARISDFGLAKLLTLD-QSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWA  719 (792)
Q Consensus       641 ~kl~Dfg~a~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~  719 (792)
                      +||+|||+++..... .........||+.|+|||++.+..++.++|||||||++|||++|+.||.........       
T Consensus       222 ~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~-------  294 (365)
T 3e7e_A          222 LALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK-------  294 (365)
T ss_dssp             EEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE-------
T ss_pred             EEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee-------
Confidence            999999999865422 223334567999999999999999999999999999999999999998543221100       


Q ss_pred             HHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCC-CCHHhHHHHhccCc
Q 003836          720 YDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHR-PTMRKVTQMLEGVV  777 (792)
Q Consensus       720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~R-Ps~~evl~~L~~~~  777 (792)
                              +    .......   ...+.+.+++..|++.+|.+| |+++++.+.|++.+
T Consensus       295 --------~----~~~~~~~---~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l  338 (365)
T 3e7e_A          295 --------P----EGLFRRL---PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVF  338 (365)
T ss_dssp             --------E----CSCCTTC---SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHH
T ss_pred             --------e----chhcccc---CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHH
Confidence                    0    0001111   123456678888999999999 67888888887654

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=3.5e-37  Score=350.99  Aligned_cols=247  Identities=27%  Similarity=0.343  Sum_probs=200.4

Q ss_pred             hhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      .+.||+|+||.||++... .+++.||+|++.+..   ......+.+|++++++++||||+++++++.+....++||||++
T Consensus       190 ~~~LG~G~fG~Vy~a~~~-~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~  268 (543)
T 3c4z_A          190 FRVLGRGGFGEVFACQMK-ATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMN  268 (543)
T ss_dssp             EEEEEECSSSEEEEEEET-TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred             EEEEeeCCCeEEEEEEEC-CCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEecc
Confidence            357999999999999754 457899999997532   2345678999999999999999999999999999999999999


Q ss_pred             CCCccccccCC----CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          583 NGTVASFLFGD----SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       583 ~gsL~~~l~~~----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      +|+|.+++...    ..+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++....... 
T Consensus       269 gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~-  344 (543)
T 3c4z_A          269 GGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-  344 (543)
T ss_dssp             TCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC-
T ss_pred             CCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccCCCc-
Confidence            99999998653    3689999999999999999999998   999999999999999999999999999987653322 


Q ss_pred             ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          659 TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      ......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+.            ..+....  .
T Consensus       345 ~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~------------~~i~~~~--~  410 (543)
T 3c4z_A          345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK------------QRVLEQA--V  410 (543)
T ss_dssp             CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHH------------HHHHHCC--C
T ss_pred             ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHH------------HHHhhcc--c
Confidence            2234579999999999999999999999999999999999999997643211111110            0111111  1


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCH-----HhHHH
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTM-----RKVTQ  771 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~-----~evl~  771 (792)
                      ..+...+..+.+++.+||+.||++||++     ++|++
T Consensus       411 ~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~  448 (543)
T 3c4z_A          411 TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT  448 (543)
T ss_dssp             CCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred             CCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence            1233456778899999999999999975     56664

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=4.3e-37  Score=327.79  Aligned_cols=246  Identities=24%  Similarity=0.360  Sum_probs=201.9

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      ...+.||+|+||.||+|... .+++.||+|++.... ....+.+.+|+.++++++||||+++++++.+....++||||++
T Consensus        25 ~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  103 (303)
T 3a7i_A           25 TKLEKIGKGSFGEVFKGIDN-RTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG  103 (303)
T ss_dssp             EEEEEEEECSSSEEEEEEET-TTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             HHhhhhcccCCeEEEEEEEC-CCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCC
Confidence            34578999999999999653 456799999987543 3446789999999999999999999999999999999999999


Q ss_pred             CCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          583 NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       583 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      +++|.+++.. ..+++..+..++.||+.||.|||+.   +|+|+||||+|||++.++.+||+|||++........ ....
T Consensus       104 ~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~  178 (303)
T 3a7i_A          104 GGSALDLLEP-GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI-KRNT  178 (303)
T ss_dssp             TEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC-CBCC
T ss_pred             CCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCcccc-ccCc
Confidence            9999999864 5689999999999999999999999   999999999999999999999999999987653322 2234


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCH
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV  742 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  742 (792)
                      ..|++.|+|||.+.+..++.++||||||+++|||++|+.||...........                 +........+.
T Consensus       179 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-----------------~~~~~~~~~~~  241 (303)
T 3a7i_A          179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFL-----------------IPKNNPPTLEG  241 (303)
T ss_dssp             CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-----------------HHHSCCCCCCS
T ss_pred             cCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHH-----------------hhcCCCCCCcc
Confidence            5689999999999999999999999999999999999999965432111000                 00000111122


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          743 TMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       743 ~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ..+..+.+++.+||+.||++|||++|+++.
T Consensus       242 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          242 NYSKPLKEFVEACLNKEPSFRPTAKELLKH  271 (303)
T ss_dssp             SCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred             ccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            334568899999999999999999999874

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=1e-37  Score=332.37  Aligned_cols=256  Identities=23%  Similarity=0.328  Sum_probs=181.0

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      .+.+.||+|+||.||++... .+++.||||++.... ....+++.+|+.++++++||||+++++++...+..++||||++
T Consensus        18 ~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   96 (303)
T 2vwi_A           18 ELQEVIGSGATAVVQAAYCA-PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLS   96 (303)
T ss_dssp             EEEEECC---CCCEEEEEC-----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCT
T ss_pred             hhhheeccccceEEEEEEEC-CCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhcc
Confidence            34578999999999999653 456789999986532 3345678999999999999999999999999999999999999


Q ss_pred             CCCccccccC--------CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccC
Q 003836          583 NGTVASFLFG--------DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL  654 (792)
Q Consensus       583 ~gsL~~~l~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~  654 (792)
                      +++|.+++..        ...+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++....
T Consensus        97 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~  173 (303)
T 2vwi_A           97 GGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLAT  173 (303)
T ss_dssp             TCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHHHCC-
T ss_pred             CCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchheecc
Confidence            9999999863        35689999999999999999999998   999999999999999999999999999876543


Q ss_pred             CCC----CccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchh
Q 003836          655 DQS----HTNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLE  729 (792)
Q Consensus       655 ~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  729 (792)
                      ...    .......||+.|+|||.+.. ..++.++||||||+++|||++|+.||..........   . ...........
T Consensus       174 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---~-~~~~~~~~~~~  249 (303)
T 2vwi_A          174 GGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLM---L-TLQNDPPSLET  249 (303)
T ss_dssp             --------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHH---H-HHTSSCCCTTC
T ss_pred             CCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHH---H-HhccCCCcccc
Confidence            221    11234568999999999876 568999999999999999999999997643221100   0 00000000000


Q ss_pred             HhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          730 ALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       730 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ...+.    ......+..+.+++.+||+.||++|||++|+++
T Consensus       250 ~~~~~----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          250 GVQDK----EMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             ---------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             ccccc----hhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            00111    111123457889999999999999999999997

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=6e-37  Score=333.86  Aligned_cols=264  Identities=19%  Similarity=0.266  Sum_probs=196.8

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceecc--------CC
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDE--------GQ  572 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~--------~~  572 (792)
                      +.+.+.||+|+||+||+|... .+++.||||++....  ......+.+|++++++++||||+++++++..        .+
T Consensus        19 y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   97 (351)
T 3mi9_A           19 YEKLAKIGQGTFGEVFKARHR-KTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKG   97 (351)
T ss_dssp             EEEEEECSSCSTTSEEEEEET-TTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------C
T ss_pred             eeEEEEEecCCCcEEEEEEEC-CCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCc
Confidence            445678999999999999754 456799999986543  2335678899999999999999999999876        44


Q ss_pred             ceEEEEEeccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCcc
Q 003836          573 NRLLVYEFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKL  651 (792)
Q Consensus       573 ~~~lV~E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~  651 (792)
                      ..++||||+++ +|.+.+... ..+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++.
T Consensus        98 ~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~  173 (351)
T 3mi9_A           98 SIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARA  173 (351)
T ss_dssp             EEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             eEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchhccc
Confidence            68999999986 666666543 6789999999999999999999999   999999999999999999999999999987


Q ss_pred             ccCCCC---CccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccc
Q 003836          652 LTLDQS---HTNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERT  727 (792)
Q Consensus       652 ~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  727 (792)
                      ......   .......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||...........+.... .......
T Consensus       174 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~  252 (351)
T 3mi9_A          174 FSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLC-GSITPEV  252 (351)
T ss_dssp             CCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH-CCCCTTT
T ss_pred             ccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh-CCCChhh
Confidence            653222   22234568999999999876 568999999999999999999999997654332211111100 0000000


Q ss_pred             hhHhhhch--------hcccCC-H------HHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          728 LEALVEND--------LEAMNN-V------TMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       728 ~~~~~~~~--------~~~~~~-~------~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ........        ...... .      .....+.+++.+||+.||++|||++|+++.
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  312 (351)
T 3mi9_A          253 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  312 (351)
T ss_dssp             STTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             ccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence            00000000        000000 0      113568899999999999999999999973

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=6.6e-37  Score=349.06  Aligned_cols=250  Identities=23%  Similarity=0.308  Sum_probs=197.8

Q ss_pred             HhhhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      .+.+.+.||+|+||+||++... .+++.+|+|++....  ......+.+|+.++++++||||+++++++.+....++|||
T Consensus        38 ~y~~~~~lG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  116 (494)
T 3lij_A           38 MYQRVKKLGSGAYGEVLLCRDK-VTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME  116 (494)
T ss_dssp             HEEEEEEEECC---EEEEEEET-TTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CeEEeeEEecCCCEEEEEEEEC-CCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            4556788999999999999754 456789999987543  3346789999999999999999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC---CCeEEeecCCCccccCCC
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH---YNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~---~~~kl~Dfg~a~~~~~~~  656 (792)
                      |+++|+|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++..   +.+||+|||+++......
T Consensus       117 ~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~  193 (494)
T 3lij_A          117 CYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK  193 (494)
T ss_dssp             CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB
T ss_pred             cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc
Confidence            999999999998778899999999999999999999998   99999999999999764   459999999998765332


Q ss_pred             CCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          657 SHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       657 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                        ......||+.|+|||++. ..++.++|||||||++|+|++|+.||........   +.........           .
T Consensus       194 --~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~---~~~i~~~~~~-----------~  256 (494)
T 3lij_A          194 --KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEI---LRKVEKGKYT-----------F  256 (494)
T ss_dssp             --CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHHTCCC-----------C
T ss_pred             --cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHhCCCC-----------C
Confidence              233456999999999886 5699999999999999999999999976533211   1000000000           0


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ........+..+.+++.+||+.+|.+|||+.|+++.
T Consensus       257 ~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h  292 (494)
T 3lij_A          257 DSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH  292 (494)
T ss_dssp             CSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred             CchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence            000011234678899999999999999999999863

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=3.6e-37  Score=344.98  Aligned_cols=196  Identities=24%  Similarity=0.379  Sum_probs=165.1

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccC-----CceE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEG-----QNRL  575 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~-----~~~~  575 (792)
                      +.+.+.||+|+||.||+|... .+++.||||++....  ....+.+.+|++++++++|+||+++++++...     ...+
T Consensus        28 y~~~~~lG~G~~g~V~~a~~~-~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~  106 (432)
T 3n9x_A           28 YIIKHLIGRGSYGYVYLAYDK-NTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELY  106 (432)
T ss_dssp             EEEEEEEEEETTEEEEEEEET-TTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred             EEEEEEEeecCCEEEEEEEEC-CCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEE
Confidence            445678999999999999754 567899999997643  23456889999999999999999999999766     5789


Q ss_pred             EEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCC
Q 003836          576 LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD  655 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~  655 (792)
                      +||||++ ++|.+++.....+++..+..++.||++||+|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus       107 lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~  182 (432)
T 3n9x_A          107 IVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSE  182 (432)
T ss_dssp             EEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC---
T ss_pred             EEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCccccccc
Confidence            9999987 59999998888899999999999999999999999   9999999999999999999999999999976543


Q ss_pred             CCC---------------------ccccccccCCccccccc-ccCCCCcccceehHHHHHHHHHhcCcCC
Q 003836          656 QSH---------------------TNTAIRGTKGYVAPEWF-RNMPITVKVDVYSYGVLLLEIICLRRNI  703 (792)
Q Consensus       656 ~~~---------------------~~~~~~gt~~y~aPE~~-~~~~~~~k~DV~S~Gv~l~el~tg~~p~  703 (792)
                      ...                     ..+...||+.|+|||++ ....++.++|||||||++|||++|..|+
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~  252 (432)
T 3n9x_A          183 KDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH  252 (432)
T ss_dssp             ----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred             ccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence            211                     12456789999999986 5667999999999999999999865544

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.1e-36  Score=333.41  Aligned_cols=265  Identities=23%  Similarity=0.250  Sum_probs=194.9

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCC------ce
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQ------NR  574 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~------~~  574 (792)
                      +.+.+.||+|+||.||+|.. ..+++.||||++....  ....+.+.+|++++++++||||+++++++....      ..
T Consensus        27 y~~~~~lG~G~~g~V~~a~~-~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~  105 (367)
T 1cm8_A           27 YRDLQPVGSGAYGAVCSAVD-GRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDF  105 (367)
T ss_dssp             EEEEEEC------CEEEEEE-TTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCC
T ss_pred             EEEeEEeeecCCeEEEEEEE-CCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceE
Confidence            34457899999999999965 3567899999996532  223567899999999999999999999997653      46


Q ss_pred             EEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccC
Q 003836          575 LLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL  654 (792)
Q Consensus       575 ~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~  654 (792)
                      ++||||+ +++|.+++.. ..+++..+..++.||++||+|||+.   +|+||||||+|||++.++.+||+|||+++....
T Consensus       106 ~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~  180 (367)
T 1cm8_A          106 YLVMPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQADS  180 (367)
T ss_dssp             EEEEECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             EEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeeccccccc
Confidence            9999999 7899999865 5688999999999999999999998   999999999999999999999999999987543


Q ss_pred             CCCCccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH-------HHHhhccc
Q 003836          655 DQSHTNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW-------AYDRYQER  726 (792)
Q Consensus       655 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~-------~~~~~~~~  726 (792)
                      .    .....+|+.|+|||.+.+ ..++.++|||||||+++||++|+.||...........+...       ........
T Consensus       181 ~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~  256 (367)
T 1cm8_A          181 E----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSD  256 (367)
T ss_dssp             S----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCH
T ss_pred             c----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhH
Confidence            2    234568999999999877 68999999999999999999999999765332111111000       00000000


Q ss_pred             chhHhhhchh------cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH--hccCc
Q 003836          727 TLEALVENDL------EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM--LEGVV  777 (792)
Q Consensus       727 ~~~~~~~~~~------~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~--L~~~~  777 (792)
                      ....++....      -..........+.+++.+||+.||++|||++|+++.  ++.+.
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~  315 (367)
T 1cm8_A          257 EAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH  315 (367)
T ss_dssp             HHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             HHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence            0111111000      000112345678899999999999999999999984  55543

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=1.7e-37  Score=330.53  Aligned_cols=248  Identities=22%  Similarity=0.345  Sum_probs=195.0

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      .+.+.||+|+||.||+|... .+++.+|+|++........+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus        22 ~i~~~lg~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~  100 (302)
T 2j7t_A           22 EIVGELGDGAFGKVYKAKNK-ETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPG  100 (302)
T ss_dssp             EEEEEEECSTTCCEEEEEET-TTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTT
T ss_pred             eecceeccCCCeEEEEEEEc-CCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCC
Confidence            45578999999999999764 45678999999876666778999999999999999999999999999999999999999


Q ss_pred             CCccccccC-CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          584 GTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       584 gsL~~~l~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      ++|.+++.. ...+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||++....... .....
T Consensus       101 ~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~  176 (302)
T 2j7t_A          101 GAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL-QKRDS  176 (302)
T ss_dssp             EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH-HC---
T ss_pred             CcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccccc-ccccc
Confidence            999998865 45689999999999999999999998   99999999999999999999999999876432111 11123


Q ss_pred             ccccCCccccccc-----ccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhc
Q 003836          663 IRGTKGYVAPEWF-----RNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLE  737 (792)
Q Consensus       663 ~~gt~~y~aPE~~-----~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  737 (792)
                      ..||+.|+|||.+     ....++.++||||||+++|||++|+.||........   .....    . ..       ...
T Consensus       177 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~~~~----~-~~-------~~~  241 (302)
T 2j7t_A          177 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV---LLKIA----K-SD-------PPT  241 (302)
T ss_dssp             --CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH---HHHHH----H-SC-------CCC
T ss_pred             ccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHH---HHHHh----c-cC-------Ccc
Confidence            4589999999998     366789999999999999999999999975432111   00000    0 00       000


Q ss_pred             ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          738 AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       738 ~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ...+...+..+.+++.+||+.||++|||++|+++
T Consensus       242 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          242 LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             CSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             cCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            0112233567889999999999999999999987

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=1.9e-37  Score=363.56  Aligned_cols=255  Identities=21%  Similarity=0.305  Sum_probs=202.1

Q ss_pred             HhhhhhhcCccccceEEEeeecC--CCceEEEEEEcccccc-cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEE
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNM--GSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~--~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~  578 (792)
                      .+.+.+.||+|+||.||+|....  .....||+|++..... ...+.+.+|+.++++++||||+++++++.+ +..++||
T Consensus       391 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~lv~  469 (656)
T 2j0j_A          391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIM  469 (656)
T ss_dssp             GEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred             cEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CceEEEE
Confidence            34456789999999999997643  2346799999875433 334679999999999999999999999854 5689999


Q ss_pred             EeccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC
Q 003836          579 EFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       579 E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      ||+++|+|.+++... ..+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++.......
T Consensus       470 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~  546 (656)
T 2j0j_A          470 ELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY  546 (656)
T ss_dssp             ECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC---
T ss_pred             EcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecCCCcc
Confidence            999999999999755 3689999999999999999999998   999999999999999999999999999987654443


Q ss_pred             CccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          658 HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       658 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                      .......+++.|+|||.+.+..++.++||||||+++|||++ |..||........   . .            . +....
T Consensus       547 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~---~-~------------~-i~~~~  609 (656)
T 2j0j_A          547 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV---I-G------------R-IENGE  609 (656)
T ss_dssp             -------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH---H-H------------H-HHHTC
T ss_pred             eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHH---H-H------------H-HHcCC
Confidence            33344557889999999998899999999999999999997 8889865432111   0 0            0 00111


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      ....+...+..+.+++.+||+.||++|||+.||++.|+.++
T Consensus       610 ~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il  650 (656)
T 2j0j_A          610 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL  650 (656)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            11123344567889999999999999999999999998764

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=4.7e-37  Score=322.69  Aligned_cols=245  Identities=24%  Similarity=0.392  Sum_probs=193.7

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      .+.+.||+|+||.||+|... .+++.||||++....   ....+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus        14 ~i~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   92 (276)
T 2h6d_A           14 VLGDTLGVGTFGKVKIGEHQ-LTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEY   92 (276)
T ss_dssp             EEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             EEEeeecCCCCeEEEEEEEC-CCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEec
Confidence            34578999999999999764 456789999986532   23456889999999999999999999999999999999999


Q ss_pred             ccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          581 MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       581 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +++++|.+++.....+++..+..++.||+.||.|||+.   +|+|+||||+|||++.++.+||+|||++.......  ..
T Consensus        93 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~--~~  167 (276)
T 2h6d_A           93 VSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE--FL  167 (276)
T ss_dssp             CCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC------
T ss_pred             cCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCCc--ce
Confidence            99999999998777899999999999999999999999   99999999999999999999999999998764322  22


Q ss_pred             ccccccCCcccccccccCCC-CcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          661 TAIRGTKGYVAPEWFRNMPI-TVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~-~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      ....+++.|+|||.+.+..+ +.++||||||+++|||++|+.||........   .     ....        ...  ..
T Consensus       168 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~---~-----~~~~--------~~~--~~  229 (276)
T 2h6d_A          168 RTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTL---F-----KKIR--------GGV--FY  229 (276)
T ss_dssp             ---------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---H-----HHHH--------HCC--CC
T ss_pred             ecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH---H-----HHhh--------cCc--cc
Confidence            33468999999999987765 6899999999999999999999975432110   0     0000        000  01


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .+......+.+++.+||+.||++|||++|+++.
T Consensus       230 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          230 IPEYLNRSVATLLMHMLQVDPLKRATIKDIREH  262 (276)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             CchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            122234568899999999999999999999984

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=7.9e-37  Score=347.81  Aligned_cols=251  Identities=23%  Similarity=0.301  Sum_probs=202.0

Q ss_pred             HHhhhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEE
Q 003836          501 VTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       501 ~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~  578 (792)
                      ..+.+.+.||+|+||+||++... .+++.||||++....  ......+.+|++++++++||||+++++++.+....++||
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  100 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDR-ITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG  100 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEET-TTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cceEEeEEEeecCCEEEEEEEEC-CCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence            45667789999999999999754 456799999986432  334678999999999999999999999999999999999


Q ss_pred             EeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEc---CCCCeEEeecCCCccccCC
Q 003836          579 EFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLD---DHYNARISDFGLAKLLTLD  655 (792)
Q Consensus       579 E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~---~~~~~kl~Dfg~a~~~~~~  655 (792)
                      ||+++|+|.+++.....+++..+..++.||+.||.|||+.   +|+||||||+|||++   .++.+||+|||+++.....
T Consensus       101 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~  177 (486)
T 3mwu_A          101 ELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN  177 (486)
T ss_dssp             CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC
T ss_pred             EcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC
Confidence            9999999999998778899999999999999999999999   999999999999995   4567999999999876433


Q ss_pred             CCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          656 QSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       656 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                      .  ......||+.|+|||++.+ .++.++|||||||++|+|++|+.||........   +.........           
T Consensus       178 ~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~---~~~i~~~~~~-----------  240 (486)
T 3mwu_A          178 T--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI---LKRVETGKYA-----------  240 (486)
T ss_dssp             ------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHHTCCC-----------
T ss_pred             C--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHhCCCC-----------
Confidence            2  2334569999999999875 599999999999999999999999976432211   1000000000           


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .........+..+.+++.+||+.+|.+|||+.|+++.
T Consensus       241 ~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h  277 (486)
T 3mwu_A          241 FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH  277 (486)
T ss_dssp             SCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred             CCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            0000112235678899999999999999999999984

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.8e-37  Score=333.91  Aligned_cols=261  Identities=23%  Similarity=0.251  Sum_probs=196.6

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccccc-----chHHHHHHHHHhcccCCCCcccccceeccCCceEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD-----SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLV  577 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~-----~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV  577 (792)
                      +.+.+.||+|+||.||++... .+++.||||++......     ..+.+.+|++++++++||||+++++++.+.+..++|
T Consensus        12 y~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   90 (346)
T 1ua2_A           12 YEKLDFLGEGQFATVYKARDK-NTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLV   90 (346)
T ss_dssp             -CEEEEEEEETTEEEEEEECS-SCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEE
T ss_pred             cEEEeEEeecCCEEEEEEEEC-CCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEE
Confidence            445578999999999999754 45678999998753221     134688999999999999999999999999999999


Q ss_pred             EEeccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC
Q 003836          578 YEFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~  656 (792)
                      |||+++ +|.+++... ..+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++......
T Consensus        91 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~  166 (346)
T 1ua2_A           91 FDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN  166 (346)
T ss_dssp             EECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC
T ss_pred             EEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceeccCCc
Confidence            999986 888888665 4689999999999999999999999   99999999999999999999999999998764332


Q ss_pred             CCccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhc--ccc---hhH
Q 003836          657 SHTNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQ--ERT---LEA  730 (792)
Q Consensus       657 ~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~  730 (792)
                       .......||+.|+|||.+.+ ..++.++|||||||++|||++|..||..........   ........  ...   ...
T Consensus       167 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~  242 (346)
T 1ua2_A          167 -RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLT---RIFETLGTPTEEQWPDMCS  242 (346)
T ss_dssp             -CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH---HHHHHHCCCCTTTSSSTTS
T ss_pred             -ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHH---HHHHHcCCCChhhhhhhcc
Confidence             22334568999999999865 458999999999999999999999987653321111   11000000  000   000


Q ss_pred             hhhc---hhcccCC-----HHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          731 LVEN---DLEAMNN-----VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       731 ~~~~---~~~~~~~-----~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      +.+.   ......+     ...+.++.+++.+||+.||++|||++|+++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  292 (346)
T 1ua2_A          243 LPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  292 (346)
T ss_dssp             STTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             CcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence            0000   0000001     2234678999999999999999999999985

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=4e-37  Score=350.24  Aligned_cols=250  Identities=22%  Similarity=0.276  Sum_probs=204.7

Q ss_pred             HHHhhhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhcccCCCCcccccceeccCCceEE
Q 003836          500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLL  576 (792)
Q Consensus       500 ~~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~l  576 (792)
                      ...+.+.+.||+|+||.||++... .+++.||||++....   ....+.+.+|+.++++++||||+++++++.+....++
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  103 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCKDK-ITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL  103 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             cCceEEeeEEecCCCEEEEEEEEC-CCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            345666788999999999999754 456799999986532   3456789999999999999999999999999999999


Q ss_pred             EEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEE---cCCCCeEEeecCCCcccc
Q 003836          577 VYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILL---DDHYNARISDFGLAKLLT  653 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl---~~~~~~kl~Dfg~a~~~~  653 (792)
                      ||||+++|+|.+++.....+++..+..++.||+.||.|||++   +|+||||||+|||+   +.++.+||+|||+++...
T Consensus       104 v~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~  180 (484)
T 3nyv_A          104 VGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE  180 (484)
T ss_dssp             EECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred             EEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence            999999999999998888899999999999999999999999   99999999999999   567899999999998764


Q ss_pred             CCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhh
Q 003836          654 LDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVE  733 (792)
Q Consensus       654 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  733 (792)
                      ...  ......||+.|+|||.+.+ .++.++|||||||++|+|++|+.||........   +..             +..
T Consensus       181 ~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~---~~~-------------i~~  241 (484)
T 3nyv_A          181 ASK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDI---LKK-------------VEK  241 (484)
T ss_dssp             CCC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHH-------------HHH
T ss_pred             ccc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHH---HHH-------------HHc
Confidence            332  2334569999999999876 699999999999999999999999976432211   100             011


Q ss_pred             chhc--ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          734 NDLE--AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       734 ~~~~--~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ....  .......+..+.+++.+||+.+|.+|||++|+++.
T Consensus       242 ~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h  282 (484)
T 3nyv_A          242 GKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH  282 (484)
T ss_dssp             CCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             CCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence            1000  00112345678899999999999999999999864

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=1.2e-36  Score=325.93  Aligned_cols=247  Identities=23%  Similarity=0.320  Sum_probs=197.7

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.+.||+|+||.||+|... .+++.||+|++...  ...+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus        31 y~~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (314)
T 3com_A           31 FDVLEKLGEGSYGSVYKAIHK-ETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCG  107 (314)
T ss_dssp             EEEEEECC----CEEEEEEET-TTCCEEEEEEEETT--SCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             hhhheeeccCCCeEEEEEEEC-CCCCEEEEEecCch--HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCC
Confidence            445678999999999999754 45679999998753  345789999999999999999999999999999999999999


Q ss_pred             CCCcccccc-CCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          583 NGTVASFLF-GDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       583 ~gsL~~~l~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      +++|.+++. ....+++..+..++.||+.||.|||+.   +|+|+||||+|||++.++.+||+|||++........ ...
T Consensus       108 ~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~-~~~  183 (314)
T 3com_A          108 AGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA-KRN  183 (314)
T ss_dssp             TEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS-CBC
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc-ccC
Confidence            999999986 346789999999999999999999998   999999999999999999999999999987643322 223


Q ss_pred             cccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCC
Q 003836          662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN  741 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  741 (792)
                      ...|++.|+|||.+.+..++.++||||||+++|||++|+.||............     ...          .......+
T Consensus       184 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-----~~~----------~~~~~~~~  248 (314)
T 3com_A          184 TVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMI-----PTN----------PPPTFRKP  248 (314)
T ss_dssp             CCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-----HHS----------CCCCCSSG
T ss_pred             ccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHH-----hcC----------CCcccCCc
Confidence            446899999999999999999999999999999999999999754321110000     000          00000112


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          742 VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       742 ~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ...+..+.+++.+||+.||.+|||+.++++
T Consensus       249 ~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          249 ELWSDNFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             GGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             ccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            223467889999999999999999999986

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=1.2e-36  Score=332.93  Aligned_cols=247  Identities=23%  Similarity=0.347  Sum_probs=199.2

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccc--------cchHHHHHHHHHhccc-CCCCcccccceeccCCc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ--------DSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQN  573 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~--------~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~  573 (792)
                      +.+.+.||+|+||.||+|... .+++.||||++.....        ...+.+.+|+.+++++ +||||+++++++.....
T Consensus        96 y~~~~~lg~G~~g~Vy~a~~~-~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~  174 (365)
T 2y7j_A           96 YDPKDVIGRGVSSVVRRCVHR-ATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSF  174 (365)
T ss_dssp             EEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSE
T ss_pred             cccceEEecCCCEEEEEEEEC-CCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCE
Confidence            344578999999999999764 3567999999865431        1145678999999999 79999999999999999


Q ss_pred             eEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCcccc
Q 003836          574 RLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT  653 (792)
Q Consensus       574 ~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~  653 (792)
                      .++||||+++++|.+++.....+++..+..++.||+.||.|||+.   +|+|+||||+|||++.++.+||+|||++....
T Consensus       175 ~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~  251 (365)
T 2y7j_A          175 MFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLE  251 (365)
T ss_dssp             EEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEecCcccccC
Confidence            999999999999999998777899999999999999999999998   99999999999999999999999999998765


Q ss_pred             CCCCCccccccccCCccccccccc------CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccc
Q 003836          654 LDQSHTNTAIRGTKGYVAPEWFRN------MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERT  727 (792)
Q Consensus       654 ~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  727 (792)
                      ...  ......||+.|+|||++.+      ..++.++|||||||++|||++|+.||........   +..          
T Consensus       252 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~---~~~----------  316 (365)
T 2y7j_A          252 PGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILM---LRM----------  316 (365)
T ss_dssp             TTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHH----------
T ss_pred             CCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHH---HHH----------
Confidence            332  2334578999999999863      3588999999999999999999999965432111   000          


Q ss_pred             hhHhhhchhcccC--CHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          728 LEALVENDLEAMN--NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       728 ~~~~~~~~~~~~~--~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                         +.........  ....+..+.+++.+||+.||++|||++|+++
T Consensus       317 ---i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          317 ---IMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             ---HHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             ---HHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence               0000000000  0012456889999999999999999999998

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=2.1e-37  Score=332.64  Aligned_cols=252  Identities=25%  Similarity=0.387  Sum_probs=195.5

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .+.+.||+|+||.||+|...    ..+|+|++....  ....+.+.+|+.++++++|+||+++++++.+.+..++||||+
T Consensus        36 ~~~~~lg~G~~g~V~~~~~~----~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~  111 (319)
T 2y4i_B           36 EIGELIGKGRFGQVYHGRWH----GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLC  111 (319)
T ss_dssp             ECCCBCCCSSSSEEEEEEES----SSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCC
T ss_pred             EEeeEeccCCceEEEEEEEc----CeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecc
Confidence            34578999999999999764    249999987532  233456889999999999999999999999999999999999


Q ss_pred             cCCCccccccCCC-CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC----
Q 003836          582 SNGTVASFLFGDS-KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ----  656 (792)
Q Consensus       582 ~~gsL~~~l~~~~-~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~----  656 (792)
                      ++++|.+++.... .+++..+..++.||+.||+|||+.   +|+||||||+|||++ ++.+||+|||+++......    
T Consensus       112 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~  187 (319)
T 2y4i_B          112 KGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRR  187 (319)
T ss_dssp             CSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC----------
T ss_pred             cCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccccccccccc
Confidence            9999999998754 689999999999999999999999   999999999999998 6799999999987653221    


Q ss_pred             CCccccccccCCccccccccc---------CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccc
Q 003836          657 SHTNTAIRGTKGYVAPEWFRN---------MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERT  727 (792)
Q Consensus       657 ~~~~~~~~gt~~y~aPE~~~~---------~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  727 (792)
                      ........|++.|+|||.+..         ..++.++||||||+++|||++|+.||.........       .. .... 
T Consensus       188 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-------~~-~~~~-  258 (319)
T 2y4i_B          188 EDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAII-------WQ-MGTG-  258 (319)
T ss_dssp             CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHH-------HH-HHTT-
T ss_pred             ccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-------HH-hccC-
Confidence            122233458999999999864         45789999999999999999999999754322110       00 0000 


Q ss_pred             hhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCC
Q 003836          728 LEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEV  779 (792)
Q Consensus       728 ~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~  779 (792)
                             ..........+.++.+++.+||+.||++|||+++++++|+.+.+.
T Consensus       259 -------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~  303 (319)
T 2y4i_B          259 -------MKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR  303 (319)
T ss_dssp             -------CCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred             -------CCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence                   000001112345688999999999999999999999999998643

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=2.2e-36  Score=322.44  Aligned_cols=247  Identities=23%  Similarity=0.284  Sum_probs=194.3

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc----ccchHHHHHHHHHhcccCCCCccccccee--ccCCceEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF----QDSEKEFKAEVNGIGQTHHKNLVRLLGYC--DEGQNRLL  576 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~----~~~~~~~~~Ei~~l~~l~h~niv~l~g~~--~~~~~~~l  576 (792)
                      +.+.+.||+|+||.||++.. ..+++.+|+|++....    ....+.+.+|++++++++|+||+++++++  .+....++
T Consensus         7 y~i~~~lg~G~~g~V~~~~~-~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (305)
T 2wtk_C            7 YLMGDLLGEGSYGKVKEVLD-SETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYM   85 (305)
T ss_dssp             BCCCCEEEECSSCEEEEEEB-TTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEE
T ss_pred             eeEeeEEecCCCeEEEEEEE-CCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEE
Confidence            34567899999999999964 4566799999987532    23457899999999999999999999998  45568899


Q ss_pred             EEEeccCCCccccccC--CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccC
Q 003836          577 VYEFMSNGTVASFLFG--DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL  654 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~  654 (792)
                      ||||++++ |.+++..  ...+++..+..++.||+.||.|||++   +|+||||||+|||++.++.+||+|||++.....
T Consensus        86 v~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~  161 (305)
T 2wtk_C           86 VMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHP  161 (305)
T ss_dssp             EEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred             EehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccccCc
Confidence            99999987 6666654  35689999999999999999999999   999999999999999999999999999987653


Q ss_pred             CCC-CccccccccCCcccccccccCC--CCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHh
Q 003836          655 DQS-HTNTAIRGTKGYVAPEWFRNMP--ITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEAL  731 (792)
Q Consensus       655 ~~~-~~~~~~~gt~~y~aPE~~~~~~--~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  731 (792)
                      ... .......||+.|+|||.+.+..  ++.++||||||+++|||++|+.||........   .     .        .+
T Consensus       162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~-----~--------~i  225 (305)
T 2wtk_C          162 FAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKL---F-----E--------NI  225 (305)
T ss_dssp             TCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---H-----H--------HH
T ss_pred             cccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHH---H-----H--------HH
Confidence            222 2223456899999999987643  47899999999999999999999975432111   0     0        00


Q ss_pred             hhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          732 VENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       732 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ....  ...+......+.+++.+||+.||++|||++|+++.
T Consensus       226 ~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  264 (305)
T 2wtk_C          226 GKGS--YAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH  264 (305)
T ss_dssp             HHCC--CCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             hcCC--CCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            0000  01122345677899999999999999999999975

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=1.2e-36  Score=329.19  Aligned_cols=261  Identities=21%  Similarity=0.309  Sum_probs=201.4

Q ss_pred             HhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCC------cccccceeccCCceE
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKN------LVRLLGYCDEGQNRL  575 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~n------iv~l~g~~~~~~~~~  575 (792)
                      .+.+.+.||+|+||+||++.....+++.||||+++.. ....+.+.+|++++++++|++      ++++++++.+.+..+
T Consensus        15 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~   93 (339)
T 1z57_A           15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHIC   93 (339)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEE
T ss_pred             ceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEE
Confidence            3455678999999999999765556789999999754 334567889999999987665      999999999999999


Q ss_pred             EEEEeccCCCccccccCCC--CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC----------------
Q 003836          576 LVYEFMSNGTVASFLFGDS--KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD----------------  637 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~----------------  637 (792)
                      +||||+ +++|.+++....  .+++..+..++.||+.||+|||+.   +|+||||||+|||++.                
T Consensus        94 lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~  169 (339)
T 1z57_A           94 IVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDER  169 (339)
T ss_dssp             EEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----CEEE
T ss_pred             EEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCccccccc
Confidence            999999 889999997654  678999999999999999999998   9999999999999987                


Q ss_pred             ---CCCeEEeecCCCccccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhh
Q 003836          638 ---HYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAI  714 (792)
Q Consensus       638 ---~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~  714 (792)
                         ++.+||+|||+++.....    .....||+.|+|||.+.+..++.++||||||+++|||++|+.||...........
T Consensus       170 ~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~  245 (339)
T 1z57_A          170 TLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAM  245 (339)
T ss_dssp             EESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHH
T ss_pred             cccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence               678999999999864322    2345689999999999999999999999999999999999999976533221111


Q ss_pred             HHHHH-------HHhhcccc------------------hhHhhhch-hcccCCHHHHHHHHHHHHHccccCCCCCCCHHh
Q 003836          715 LTDWA-------YDRYQERT------------------LEALVEND-LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRK  768 (792)
Q Consensus       715 ~~~~~-------~~~~~~~~------------------~~~~~~~~-~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~e  768 (792)
                      +....       ........                  ......+. ..........+++.+++.+||+.||++|||++|
T Consensus       246 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e  325 (339)
T 1z57_A          246 MERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLRE  325 (339)
T ss_dssp             HHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHH
Confidence            10000       00000000                  00000000 001123356788999999999999999999999


Q ss_pred             HHH
Q 003836          769 VTQ  771 (792)
Q Consensus       769 vl~  771 (792)
                      +++
T Consensus       326 ll~  328 (339)
T 1z57_A          326 ALK  328 (339)
T ss_dssp             HTT
T ss_pred             Hhc
Confidence            987

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=1.8e-36  Score=326.05  Aligned_cols=251  Identities=23%  Similarity=0.318  Sum_probs=195.3

Q ss_pred             HHhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccc--------cchHHHHHHHHHhcccCCCCcccccceeccCC
Q 003836          501 VTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ--------DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQ  572 (792)
Q Consensus       501 ~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~--------~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~  572 (792)
                      ..+.+.+.||+|+||.||+|... .+++.||||++.....        .....+.+|++++++++||||+++++++....
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   88 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFER-KTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED   88 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred             hceeEeeEEecCCCEEEEEEEEc-CCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence            44566789999999999999754 4568999999865321        22345889999999999999999999987655


Q ss_pred             ceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCC---eEEeecCCC
Q 003836          573 NRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYN---ARISDFGLA  649 (792)
Q Consensus       573 ~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~---~kl~Dfg~a  649 (792)
                       .++||||+++++|.+++.....+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.   +||+|||++
T Consensus        89 -~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~  164 (322)
T 2ycf_A           89 -YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHS  164 (322)
T ss_dssp             -EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCCTTC
T ss_pred             -eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccCccc
Confidence             899999999999999998888899999999999999999999998   9999999999999987664   999999999


Q ss_pred             ccccCCCCCccccccccCCcccccccc---cCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhccc
Q 003836          650 KLLTLDQSHTNTAIRGTKGYVAPEWFR---NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQER  726 (792)
Q Consensus       650 ~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~  726 (792)
                      +.....  .......||+.|+|||.+.   ...++.++||||||+++|||++|+.||........   +....... ...
T Consensus       165 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~~~~~~-~~~  238 (322)
T 2ycf_A          165 KILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS---LKDQITSG-KYN  238 (322)
T ss_dssp             EECCCC--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC---HHHHHHHT-CCC
T ss_pred             eecccc--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH---HHHHHHhC-ccc
Confidence            876422  1223456899999999974   56789999999999999999999999965432211   00000000 000


Q ss_pred             chhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          727 TLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       727 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .....         ....+..+.+++.+||+.||++||+++|+++
T Consensus       239 ~~~~~---------~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          239 FIPEV---------WAEVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             CCHHH---------HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             cCchh---------hhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence            00000         0123467889999999999999999999985

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=5.8e-37  Score=340.68  Aligned_cols=260  Identities=19%  Similarity=0.272  Sum_probs=180.1

Q ss_pred             hhcCccccceEEEeeecC-CCceEEEEEEcccccccchHHHHHHHHHhcccCCCCccccccee--ccCCceEEEEEeccC
Q 003836          507 EELGRGAFGTVYKGFVNM-GSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYC--DEGQNRLLVYEFMSN  583 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~-~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~--~~~~~~~lV~E~~~~  583 (792)
                      ++||+|+||+||+|.... .+++.||||++...  .....+.+|+.++++++||||+++++++  ......++||||+++
T Consensus        27 ~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~~  104 (405)
T 3rgf_A           27 CKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH  104 (405)
T ss_dssp             CCCC-----EEEEEEESSSSCCCCEEEEECSSS--SCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCSE
T ss_pred             cEeeecCCeEEEEEEEccCCCCeEEEEEEECCC--CCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCCC
Confidence            479999999999997643 34678999999753  3345788999999999999999999999  457789999999975


Q ss_pred             CCccccccCC---------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEE----cCCCCeEEeecCCCc
Q 003836          584 GTVASFLFGD---------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILL----DDHYNARISDFGLAK  650 (792)
Q Consensus       584 gsL~~~l~~~---------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl----~~~~~~kl~Dfg~a~  650 (792)
                       +|.+++...         ..+++..+..|+.||+.||+|||+.   +|+||||||+||||    +.++.+||+|||+++
T Consensus       105 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~  180 (405)
T 3rgf_A          105 -DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFAR  180 (405)
T ss_dssp             -EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC
T ss_pred             -CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEEECCCce
Confidence             777776421         2488999999999999999999999   99999999999999    778999999999998


Q ss_pred             cccCCCC--CccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhh------hhhHHHHHHH
Q 003836          651 LLTLDQS--HTNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVD------KAILTDWAYD  721 (792)
Q Consensus       651 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~------~~~~~~~~~~  721 (792)
                      .......  .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........      ...+......
T Consensus       181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~  260 (405)
T 3rgf_A          181 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNV  260 (405)
T ss_dssp             ----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHH
T ss_pred             ecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHh
Confidence            7654322  22334678999999999987 4589999999999999999999999965432110      0000000000


Q ss_pred             hh--cccchh---------Hhhhc---hhcccC---------CHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          722 RY--QERTLE---------ALVEN---DLEAMN---------NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       722 ~~--~~~~~~---------~~~~~---~~~~~~---------~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ..  ......         .+...   ......         .......+.+|+.+||+.||.+|||++|+++.
T Consensus       261 ~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h  334 (405)
T 3rgf_A          261 MGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD  334 (405)
T ss_dssp             HCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            00  000000         00000   000000         00114568899999999999999999999985

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=1.7e-36  Score=338.84  Aligned_cols=196  Identities=23%  Similarity=0.340  Sum_probs=168.0

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhccc------CCCCcccccceeccCCceEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT------HHKNLVRLLGYCDEGQNRLL  576 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l------~h~niv~l~g~~~~~~~~~l  576 (792)
                      +.+.+.||+|+||+||+|... .+++.||||++... ......+.+|+++++.+      +|+||+++++++......++
T Consensus        99 y~~~~~LG~G~fg~V~~a~~~-~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  176 (429)
T 3kvw_A           99 YEVLKVIGKGSFGQVVKAYDH-KVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICM  176 (429)
T ss_dssp             EEEEEEEEESSSEEEEEEEET-TTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEE
T ss_pred             EEEEEEcccCccEEEEEEEEC-CCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEE
Confidence            445678999999999999654 45789999999753 23345677888887776      57799999999999999999


Q ss_pred             EEEeccCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCC--eEEeecCCCccc
Q 003836          577 VYEFMSNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYN--ARISDFGLAKLL  652 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~--~kl~Dfg~a~~~  652 (792)
                      ||||+. ++|.+++...  ..+++..+..|+.||+.||+|||+.   +|+||||||+|||++.++.  +||+|||+++..
T Consensus       177 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~  252 (429)
T 3kvw_A          177 TFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYE  252 (429)
T ss_dssp             EECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred             EEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecccceec
Confidence            999996 5899888765  3589999999999999999999999   9999999999999999987  999999999764


Q ss_pred             cCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchh
Q 003836          653 TLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEIS  708 (792)
Q Consensus       653 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~  708 (792)
                      ..    ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus       253 ~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~  304 (429)
T 3kvw_A          253 HQ----RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE  304 (429)
T ss_dssp             TC----CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             CC----cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCH
Confidence            32    22345689999999999999999999999999999999999999976543

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=1.1e-36  Score=347.97  Aligned_cols=247  Identities=23%  Similarity=0.317  Sum_probs=198.2

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccc-------------cchHHHHHHHHHhcccCCCCcccccceec
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ-------------DSEKEFKAEVNGIGQTHHKNLVRLLGYCD  569 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~Ei~~l~~l~h~niv~l~g~~~  569 (792)
                      +.+.++||+|+||+||++... .+++.+|+|++.....             ...+.+.+|+.++++++||||+++++++.
T Consensus        38 Y~~~~~lG~G~~g~V~~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~  116 (504)
T 3q5i_A           38 YFKVRKLGSGAYGEVLLCKEK-NGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFE  116 (504)
T ss_dssp             EEEEEEEEC--CEEEEEEEET-TTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             eEEEeEecccCCeEEEEEEEC-CCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence            445678999999999999754 4567999999875321             23567899999999999999999999999


Q ss_pred             cCCceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCC---CeEEeec
Q 003836          570 EGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY---NARISDF  646 (792)
Q Consensus       570 ~~~~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~---~~kl~Df  646 (792)
                      +....++||||+++|+|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++   .+||+||
T Consensus       117 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Df  193 (504)
T 3q5i_A          117 DKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDF  193 (504)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSEEECCC
T ss_pred             cCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccEEEEEC
Confidence            9999999999999999999998878899999999999999999999998   999999999999999776   6999999


Q ss_pred             CCCccccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhccc
Q 003836          647 GLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQER  726 (792)
Q Consensus       647 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~  726 (792)
                      |+++......  ......||+.|+|||.+. ..++.++|||||||++|+|++|+.||........   +..         
T Consensus       194 g~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~---~~~---------  258 (504)
T 3q5i_A          194 GLSSFFSKDY--KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDI---IKK---------  258 (504)
T ss_dssp             TTCEECCTTS--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHH---------
T ss_pred             CCCEEcCCCC--ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHH---------
Confidence            9998765432  233456999999999987 4699999999999999999999999976433211   000         


Q ss_pred             chhHhhhchhccc--CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          727 TLEALVENDLEAM--NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       727 ~~~~~~~~~~~~~--~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                          +........  .....+.++.+++.+||+.||.+|||++|+++.
T Consensus       259 ----i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h  302 (504)
T 3q5i_A          259 ----VEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS  302 (504)
T ss_dssp             ----HHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             ----HHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence                000000000  001234678899999999999999999999863

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=1.5e-36  Score=342.51  Aligned_cols=257  Identities=19%  Similarity=0.261  Sum_probs=201.1

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCC-CCcccccceeccCCceEEEEEec
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHH-KNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h-~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +.+.++||+|+||.||+|... .+++.||||++....  ...++.+|+++++.++| +++..+..++.+.+..+|||||+
T Consensus         9 y~i~~~LG~G~fG~Vy~a~~~-~~~~~vAvK~~~~~~--~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~   85 (483)
T 3sv0_A            9 FRLGRKIGSGSFGEIYLGTNI-QTNEEVAIKLENVKT--KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL   85 (483)
T ss_dssp             EECCCCCEECSSCEEEEEEET-TTCCEEEEEEEETTC--SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             EEEEEEEeeCCCEEEEEEEEC-CCCcEEEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC
Confidence            345578999999999999753 456799999876533  23468899999999976 55556666667888889999999


Q ss_pred             cCCCccccccC-CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEE---cCCCCeEEeecCCCccccCCCC
Q 003836          582 SNGTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILL---DDHYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       582 ~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl---~~~~~~kl~Dfg~a~~~~~~~~  657 (792)
                       +++|.+++.. ...+++..++.|+.||+.||+|||++   +|+||||||+||||   +.++.+||+|||+++.......
T Consensus        86 -g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~  161 (483)
T 3sv0_A           86 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTST  161 (483)
T ss_dssp             -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred             -CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcc
Confidence             9999999974 46789999999999999999999999   99999999999999   6889999999999987654432


Q ss_pred             C------ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHh
Q 003836          658 H------TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEAL  731 (792)
Q Consensus       658 ~------~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  731 (792)
                      .      ......||+.|+|||.+.+..++.++|||||||+||||++|+.||...........+........ ...+..+
T Consensus       162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~-~~~~~~l  240 (483)
T 3sv0_A          162 HQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV-ATSIEAL  240 (483)
T ss_dssp             CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHH-HSCHHHH
T ss_pred             ccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccc-cccHHHH
Confidence            2      12256799999999999999999999999999999999999999976433222111111111110 0111111


Q ss_pred             hhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          732 VENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       732 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                      .         ...+.++.+++..||+.+|++||++++|+++|+.+
T Consensus       241 ~---------~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l  276 (483)
T 3sv0_A          241 C---------RGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL  276 (483)
T ss_dssp             H---------TTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred             h---------cCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            1         12246788999999999999999999999998775

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=1.2e-36  Score=323.46  Aligned_cols=246  Identities=22%  Similarity=0.303  Sum_probs=199.7

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc---------ccchHHHHHHHHHhcccC-CCCcccccceeccCCc
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---------QDSEKEFKAEVNGIGQTH-HKNLVRLLGYCDEGQN  573 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---------~~~~~~~~~Ei~~l~~l~-h~niv~l~g~~~~~~~  573 (792)
                      .+.+.||+|+||.||++... .+++.||||++....         ....+.+.+|++++++++ ||||+++++++.+...
T Consensus        20 ~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~   98 (298)
T 1phk_A           20 EPKEILGRGVSSVVRRCIHK-PTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTF   98 (298)
T ss_dssp             EEEEEEEECSSEEEEEEEET-TTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             ceeeeecCCCceEEEEEEEc-CcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCe
Confidence            34578999999999999754 567899999986532         122456889999999995 9999999999999999


Q ss_pred             eEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCcccc
Q 003836          574 RLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT  653 (792)
Q Consensus       574 ~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~  653 (792)
                      .++||||+++++|.+++.....+++..+..++.||+.||.|||+.   +|+|+||||+|||++.++.+||+|||+++...
T Consensus        99 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~  175 (298)
T 1phk_A           99 FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLD  175 (298)
T ss_dssp             EEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             EEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecccchhhcC
Confidence            999999999999999998777899999999999999999999998   99999999999999999999999999998764


Q ss_pred             CCCCCccccccccCCcccccccc------cCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccc
Q 003836          654 LDQSHTNTAIRGTKGYVAPEWFR------NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERT  727 (792)
Q Consensus       654 ~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  727 (792)
                      ...  ......+++.|+|||.+.      ...++.++||||||+++|||++|+.||..........              
T Consensus       176 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~--------------  239 (298)
T 1phk_A          176 PGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLR--------------  239 (298)
T ss_dssp             TTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--------------
T ss_pred             CCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHH--------------
Confidence            332  223456899999999985      4568899999999999999999999996543211100              


Q ss_pred             hhHhhhchhc--ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          728 LEALVENDLE--AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       728 ~~~~~~~~~~--~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                        .+......  .......+..+.+++.+||+.||++|||++|+++
T Consensus       240 --~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          240 --MIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             --HHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             --HHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence              00000000  0011234567889999999999999999999987

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=2.4e-36  Score=330.50  Aligned_cols=259  Identities=23%  Similarity=0.284  Sum_probs=180.8

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccC------CceE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEG------QNRL  575 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~------~~~~  575 (792)
                      .+.+.||+|+||.||+|.. ..+++.||||++....  ....+.+.+|++++++++||||+++++++...      ...+
T Consensus        32 ~~~~~lG~G~~g~V~~a~~-~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~  110 (367)
T 2fst_X           32 QNLSPVGSGAYGSVCAAFD-TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY  110 (367)
T ss_dssp             EEEEECC----CCEEEEEE-TTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCE
T ss_pred             EEeeEEeecCCeEEEEEEE-CCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEE
Confidence            3457899999999999964 4567899999997532  23456788999999999999999999998654      5679


Q ss_pred             EEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCC
Q 003836          576 LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD  655 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~  655 (792)
                      +|+|++ +++|.+++.. ..+++..+..++.||++||+|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus       111 lv~e~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~  185 (367)
T 2fst_X          111 LVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE  185 (367)
T ss_dssp             EEEECC-CEECC------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC----------
T ss_pred             EEeccc-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecccccccccc
Confidence            999999 6899999865 5689999999999999999999998   9999999999999999999999999999865322


Q ss_pred             CCCccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH-------HHHhhcccc
Q 003836          656 QSHTNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW-------AYDRYQERT  727 (792)
Q Consensus       656 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~-------~~~~~~~~~  727 (792)
                          .....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||...........+...       .........
T Consensus       186 ----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~  261 (367)
T 2fst_X          186 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES  261 (367)
T ss_dssp             ---------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHH
T ss_pred             ----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHH
Confidence                234568999999999876 68999999999999999999999999765332111111000       000000011


Q ss_pred             hhHhhhchhc-ccCC-----HHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          728 LEALVENDLE-AMNN-----VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       728 ~~~~~~~~~~-~~~~-----~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ...++..... ....     ......+.+|+.+||+.||++|||++|+++.
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h  312 (367)
T 2fst_X          262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  312 (367)
T ss_dssp             HHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence            1111111000 0000     1224678899999999999999999999975

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=1.9e-37  Score=340.46  Aligned_cols=250  Identities=11%  Similarity=0.055  Sum_probs=178.2

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccc---cchHHHHHHHHHhccc--CCCCcccccc-------eeccC
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ---DSEKEFKAEVNGIGQT--HHKNLVRLLG-------YCDEG  571 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l--~h~niv~l~g-------~~~~~  571 (792)
                      .+.+.||+|+||.||+|... .+++.||||++.....   ...+.+.+|+.+++.+  +||||++++.       ++...
T Consensus        65 ~~~~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~  143 (371)
T 3q60_A           65 KLVEPLRVGDRSVVFLVRDV-ERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQ  143 (371)
T ss_dssp             EEEEEEEECSSEEEEEEEET-TTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEET
T ss_pred             eeeeeccCCCCEEEEEEEEC-CCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecC
Confidence            34578999999999999754 4568999999987432   3345677885544444  6999888553       33222


Q ss_pred             -----------------CceEEEEEeccCCCccccccCC-CCCchhHH------HHHHHHHHHHHHHHhhccCCCeEecC
Q 003836          572 -----------------QNRLLVYEFMSNGTVASFLFGD-SKPNWKLR------TEIAMGIAGGLFYLHEECCTQIIHCD  627 (792)
Q Consensus       572 -----------------~~~~lV~E~~~~gsL~~~l~~~-~~l~~~~~------~~i~~~ia~gL~yLH~~~~~~ivH~d  627 (792)
                                       ...+|||||++ |+|.+++... ..+.+..+      ..++.||+.||+|||++   +|+|||
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ivHrD  219 (371)
T 3q60_A          144 SQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSK---GLVHGH  219 (371)
T ss_dssp             TSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEEETT
T ss_pred             CCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCccCc
Confidence                             34799999999 8999999763 34556666      78889999999999998   999999


Q ss_pred             CCCCcEEEcCCCCeEEeecCCCccccCCCCCccccccccCCccccccccc--CCCCcccceehHHHHHHHHHhcCcCCCc
Q 003836          628 IKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN--MPITVKVDVYSYGVLLLEIICLRRNIDN  705 (792)
Q Consensus       628 ikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~k~DV~S~Gv~l~el~tg~~p~~~  705 (792)
                      |||+|||++.++.+||+|||+++.....    .....+|+.|+|||.+.+  ..++.++|||||||++|||++|+.||..
T Consensus       220 ikp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~  295 (371)
T 3q60_A          220 FTPDNLFIMPDGRLMLGDVSALWKVGTR----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGL  295 (371)
T ss_dssp             CSGGGEEECTTSCEEECCGGGEEETTCE----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTB
T ss_pred             CCHHHEEECCCCCEEEEecceeeecCCC----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCC
Confidence            9999999999999999999999865321    113456799999999987  7899999999999999999999999976


Q ss_pred             chhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          706 EISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       706 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ........         +.....................+..+.+++.+||+.||++|||+.|+++
T Consensus       296 ~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          296 VTPGIKGS---------WKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             CCTTCTTC---------CCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             cCcccccc---------hhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            53221100         0000000001111111111234567889999999999999999999975

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=3.3e-36  Score=329.68  Aligned_cols=264  Identities=20%  Similarity=0.238  Sum_probs=198.3

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccc-cchHHHHHHHHHhcccCCCCcccccceeccC-----CceEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEG-----QNRLL  576 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~-----~~~~l  576 (792)
                      +.+.+.||+|+||.||++... .+++.||||++..... ...+.+.+|++++.+++||||+++++++...     ...++
T Consensus        29 y~~~~~lG~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~i  107 (364)
T 3qyz_A           29 YTNLSYIGEGAYGMVCSAYDN-LNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI  107 (364)
T ss_dssp             EEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred             EEEEEEeecCCCeEEEEEEEC-CCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEE
Confidence            445678999999999999654 4578999999975432 3346789999999999999999999998654     46899


Q ss_pred             EEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC
Q 003836          577 VYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~  656 (792)
                      ||||++ |+|.+++.. ..+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++......
T Consensus       108 v~e~~~-~~L~~~l~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~  182 (364)
T 3qyz_A          108 VQDLME-TDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH  182 (364)
T ss_dssp             EEECCS-EEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred             EEcccC-cCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEecCCCC
Confidence            999998 489888854 4689999999999999999999999   99999999999999999999999999998765433


Q ss_pred             CCc--cccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHH-------HHhhccc
Q 003836          657 SHT--NTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWA-------YDRYQER  726 (792)
Q Consensus       657 ~~~--~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~-------~~~~~~~  726 (792)
                      ...  .....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||...........+....       .......
T Consensus       183 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  262 (364)
T 3qyz_A          183 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL  262 (364)
T ss_dssp             CBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCH
T ss_pred             CccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhh
Confidence            222  234579999999998754 558999999999999999999999997654322111111000       0000000


Q ss_pred             chhHhhhchh-cccC-----CHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          727 TLEALVENDL-EAMN-----NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       727 ~~~~~~~~~~-~~~~-----~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .......... ....     ......++.+++.+||+.||++|||++|+++.
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  314 (364)
T 3qyz_A          263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  314 (364)
T ss_dssp             HHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            0000000000 0000     11234678899999999999999999999974

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=6.9e-37  Score=337.46  Aligned_cols=258  Identities=22%  Similarity=0.259  Sum_probs=191.6

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceecc------------
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDE------------  570 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~------------  570 (792)
                      +.+.+.||+|+||+||+|... .+++.||||++....    ....+|++++++++||||+++++++..            
T Consensus         9 y~~~~~lG~G~fg~V~~a~~~-~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~   83 (383)
T 3eb0_A            9 YSLGKTLGTGSFGIVCEVFDI-ESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPP   83 (383)
T ss_dssp             EEEEEEEECC-CEEEEEEEET-TTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC-----------
T ss_pred             EEEEEEEEeccCEEEEEEEEC-CCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCcccccccccc
Confidence            445678999999999999753 467899999986532    223479999999999999999999843            


Q ss_pred             --------------------------CCceEEEEEeccCCCcccccc----CCCCCchhHHHHHHHHHHHHHHHHhhccC
Q 003836          571 --------------------------GQNRLLVYEFMSNGTVASFLF----GDSKPNWKLRTEIAMGIAGGLFYLHEECC  620 (792)
Q Consensus       571 --------------------------~~~~~lV~E~~~~gsL~~~l~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~  620 (792)
                                                ....++||||+++ +|.+.+.    ....+++..+..++.||++||+|||+.  
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--  160 (383)
T 3eb0_A           84 DDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL--  160 (383)
T ss_dssp             --------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT--
T ss_pred             cccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence                                      3347899999985 7766654    456789999999999999999999998  


Q ss_pred             CCeEecCCCCCcEEEc-CCCCeEEeecCCCccccCCCCCccccccccCCcccccccccC-CCCcccceehHHHHHHHHHh
Q 003836          621 TQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIIC  698 (792)
Q Consensus       621 ~~ivH~dikp~NILl~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~t  698 (792)
                       +|+||||||+|||++ .++.+||+|||+++......  ......+|+.|+|||.+.+. .++.++|||||||++|||++
T Consensus       161 -gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~  237 (383)
T 3eb0_A          161 -GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE--PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELIL  237 (383)
T ss_dssp             -TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS--CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH
T ss_pred             -cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC--CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHh
Confidence             999999999999998 68899999999998764332  23345689999999998764 58999999999999999999


Q ss_pred             cCcCCCcchhhhhhhhHHHHHH-------Hh----hcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHH
Q 003836          699 LRRNIDNEISKVDKAILTDWAY-------DR----YQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMR  767 (792)
Q Consensus       699 g~~p~~~~~~~~~~~~~~~~~~-------~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~  767 (792)
                      |+.||...........+.....       ..    +.+.....+.........+...+.++.+++.+||+.||++|||+.
T Consensus       238 g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~  317 (383)
T 3eb0_A          238 GKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPY  317 (383)
T ss_dssp             SSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred             CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHH
Confidence            9999976543221111110000       00    000000000011111112233456789999999999999999999


Q ss_pred             hHHH
Q 003836          768 KVTQ  771 (792)
Q Consensus       768 evl~  771 (792)
                      |+++
T Consensus       318 e~l~  321 (383)
T 3eb0_A          318 EAMA  321 (383)
T ss_dssp             HHHT
T ss_pred             HHhc
Confidence            9985

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=2.8e-36  Score=331.06  Aligned_cols=260  Identities=23%  Similarity=0.243  Sum_probs=188.9

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCC------ceE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQ------NRL  575 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~------~~~  575 (792)
                      .+.+.||+|+||.||+|.. ..+++.||||++....  ....+.+.+|+.++++++||||+++++++...+      ..+
T Consensus        28 ~~~~~lG~G~~g~V~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~  106 (371)
T 2xrw_A           28 QNLKPIGSGAQGIVCAAYD-AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVY  106 (371)
T ss_dssp             EEEEEEEECSSEEEEEEEE-TTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEE
T ss_pred             eEeeeeEecCCEEEEEEEE-CCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceE
Confidence            3457899999999999965 3457899999987532  234567889999999999999999999997654      789


Q ss_pred             EEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCC
Q 003836          576 LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD  655 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~  655 (792)
                      +||||+++ +|.+++.  ..+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus       107 lv~e~~~~-~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~  180 (371)
T 2xrw_A          107 IVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS  180 (371)
T ss_dssp             EEEECCSE-EHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC-------
T ss_pred             EEEEcCCC-CHHHHHh--hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeecccccccc
Confidence            99999985 7877775  3588899999999999999999998   9999999999999999999999999999865432


Q ss_pred             CCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHH-------HHHHhh-----
Q 003836          656 QSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTD-------WAYDRY-----  723 (792)
Q Consensus       656 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~-------~~~~~~-----  723 (792)
                        .......||+.|+|||.+.+..++.++|||||||++|||++|+.||...........+..       ......     
T Consensus       181 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  258 (371)
T 2xrw_A          181 --FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVR  258 (371)
T ss_dssp             -----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHH
T ss_pred             --cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHH
Confidence              223345689999999999999999999999999999999999999976433211000000       000000     


Q ss_pred             ---------cccchhHhhhchhccc---CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          724 ---------QERTLEALVENDLEAM---NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       724 ---------~~~~~~~~~~~~~~~~---~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                               ................   ........+.+|+.+||+.||++|||++|+++.
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  319 (371)
T 2xrw_A          259 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH  319 (371)
T ss_dssp             HHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             HHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence                     0000001110000000   112346789999999999999999999999975

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=9.9e-37  Score=322.62  Aligned_cols=248  Identities=25%  Similarity=0.340  Sum_probs=182.7

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccccc-c-hHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD-S-EKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~-~-~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      +.+.+.||+|+||+||++... .+++.||+|++...... . .+.+.++...++.++||||+++++++.+.+..++||||
T Consensus         9 y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~   87 (290)
T 3fme_A            9 LEPIMELGRGAYGVVEKMRHV-PSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMEL   87 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEET-TTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEEC
T ss_pred             hhhHHhcCCCCCeEEEEEEec-CCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEeh
Confidence            345578999999999999753 45789999999754222 2 23344555568889999999999999999999999999


Q ss_pred             ccCCCccccccC----CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC
Q 003836          581 MSNGTVASFLFG----DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       581 ~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~  656 (792)
                      +++ +|.+++..    ...+++..+..++.||+.||+|||++  .+|+||||||+|||++.++.+||+|||+++......
T Consensus        88 ~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  164 (290)
T 3fme_A           88 MDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV  164 (290)
T ss_dssp             CSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCEECTTCCEEBCCC----------
T ss_pred             hcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeecCCcccccccc
Confidence            984 88777643    46789999999999999999999985  389999999999999999999999999998764332


Q ss_pred             CCccccccccCCccccccc----ccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhh
Q 003836          657 SHTNTAIRGTKGYVAPEWF----RNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALV  732 (792)
Q Consensus       657 ~~~~~~~~gt~~y~aPE~~----~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  732 (792)
                      .  .....||+.|+|||.+    .+..++.++||||||+++|||++|+.||.........               +....
T Consensus       165 ~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---------------~~~~~  227 (290)
T 3fme_A          165 A--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQ---------------LKQVV  227 (290)
T ss_dssp             -------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHH---------------HHHHH
T ss_pred             c--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHH---------------HHHHh
Confidence            2  2234689999999996    5667899999999999999999999999753221110               01111


Q ss_pred             hchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          733 ENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       733 ~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ............+.++.+++.+||+.||++|||++|+++
T Consensus       228 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          228 EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             HSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             ccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence            111111112234567889999999999999999999987

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=4.8e-36  Score=328.16  Aligned_cols=269  Identities=22%  Similarity=0.247  Sum_probs=192.0

Q ss_pred             HHHHHHHhhh--hhhcCccccceEEEeeecCCCceEEEEEEccccccc-----------chHHHHHHHHHhcccCCCCcc
Q 003836          496 KELVEVTRGF--KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD-----------SEKEFKAEVNGIGQTHHKNLV  562 (792)
Q Consensus       496 ~el~~~~~~~--~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~Ei~~l~~l~h~niv  562 (792)
                      .++.....++  .+.||+|+||.||+|...  .++.||||++......           ..+.+.+|++++++++||||+
T Consensus        15 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv   92 (362)
T 3pg1_A           15 AELHAMQSPYTVQRFISSGSYGAVCAGVDS--EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL   92 (362)
T ss_dssp             HHHHHTTCSCEEEEEEEEETTEEEEEEECT--TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             HHHHHhccceEEeEEeccCCCEEEEEEECC--CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence            4444444443  478999999999999754  3678999998653222           137899999999999999999


Q ss_pred             cccceec-----cCCceEEEEEeccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEc
Q 003836          563 RLLGYCD-----EGQNRLLVYEFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLD  636 (792)
Q Consensus       563 ~l~g~~~-----~~~~~~lV~E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~  636 (792)
                      ++++++.     .....++||||++ |+|.+++... ..+++..+..++.||+.||.|||+.   +|+||||||+|||++
T Consensus        93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~  168 (362)
T 3pg1_A           93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLA  168 (362)
T ss_dssp             CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEC
T ss_pred             ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEc
Confidence            9999983     3446899999998 5787777654 4789999999999999999999999   999999999999999


Q ss_pred             CCCCeEEeecCCCccccCCCCCccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhH
Q 003836          637 DHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAIL  715 (792)
Q Consensus       637 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~  715 (792)
                      .++.+||+|||+++......  ......+|+.|+|||.+.+ ..++.++|||||||++|||++|+.||...........+
T Consensus       169 ~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i  246 (362)
T 3pg1_A          169 DNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKI  246 (362)
T ss_dssp             TTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             CCCCEEEEecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            99999999999998543322  2234568999999999876 67999999999999999999999999765432111111


Q ss_pred             HHHH-------HHhhcccchhHhhhchhcc-------cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          716 TDWA-------YDRYQERTLEALVENDLEA-------MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       716 ~~~~-------~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ....       ...+........+......       .........+.+++.+||+.||++|||++|+++.
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  317 (362)
T 3pg1_A          247 VEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH  317 (362)
T ss_dssp             HHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence            0000       0000000111111111100       0111234678899999999999999999999974

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=1e-36  Score=328.24  Aligned_cols=264  Identities=21%  Similarity=0.292  Sum_probs=197.5

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccc--cchHHHHHHHHHhccc---CCCCcccccceec-----cCC
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ--DSEKEFKAEVNGIGQT---HHKNLVRLLGYCD-----EGQ  572 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l---~h~niv~l~g~~~-----~~~  572 (792)
                      +.+.+.||+|+||.||++.....+++.||+|++.....  .....+.+|+.+++++   +||||+++++++.     ...
T Consensus        13 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~   92 (326)
T 1blx_A           13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET   92 (326)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEE
T ss_pred             eeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCc
Confidence            34557899999999999986545678999999865322  2234577788777766   8999999999987     566


Q ss_pred             ceEEEEEeccCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCc
Q 003836          573 NRLLVYEFMSNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAK  650 (792)
Q Consensus       573 ~~~lV~E~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~  650 (792)
                      ..++||||++ |+|.+++...  ..+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++
T Consensus        93 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Dfg~~~  168 (326)
T 1blx_A           93 KLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR  168 (326)
T ss_dssp             EEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred             eEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecCcccc
Confidence            7899999998 6999998764  3489999999999999999999999   99999999999999999999999999998


Q ss_pred             cccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHH----Hhhccc
Q 003836          651 LLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAY----DRYQER  726 (792)
Q Consensus       651 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~----~~~~~~  726 (792)
                      ......  ......||+.|+|||.+.+..++.++||||||+++|||++|+.||...........+.....    ..+...
T Consensus       169 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  246 (326)
T 1blx_A          169 IYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD  246 (326)
T ss_dssp             CCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTT
T ss_pred             cccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccc
Confidence            654322  23345689999999999999999999999999999999999999976543211111100000    000000


Q ss_pred             -ch-hHhhhc---hhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          727 -TL-EALVEN---DLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       727 -~~-~~~~~~---~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                       .. ......   ..........+..+.+++.+||+.||++|||+.|+++.
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  297 (326)
T 1blx_A          247 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  297 (326)
T ss_dssp             CSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             cccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence             00 000000   00001112345678899999999999999999999964

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=4.2e-36  Score=319.57  Aligned_cols=248  Identities=27%  Similarity=0.388  Sum_probs=189.2

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceecc------------
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDE------------  570 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~------------  570 (792)
                      +.+.+.||+|+||.||+|... .+++.||||++... ....+.+.+|+.++++++||||+++++++.+            
T Consensus         8 y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~   85 (303)
T 1zy4_A            8 FEEIAVLGQGAFGQVVKARNA-LDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVK   85 (303)
T ss_dssp             EEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------
T ss_pred             chhhheeccCCcEEEEEEEEc-CCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccc
Confidence            445578999999999999754 45679999998653 3445788999999999999999999998754            


Q ss_pred             -CCceEEEEEeccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCC
Q 003836          571 -GQNRLLVYEFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGL  648 (792)
Q Consensus       571 -~~~~~lV~E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~  648 (792)
                       ....++||||+++|+|.+++... ..+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+
T Consensus        86 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~  162 (303)
T 1zy4_A           86 KKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGL  162 (303)
T ss_dssp             CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred             cCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEeeCcc
Confidence             45678999999999999999754 4577889999999999999999999   999999999999999999999999999


Q ss_pred             CccccCCC-------------CCccccccccCCcccccccccC-CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhh
Q 003836          649 AKLLTLDQ-------------SHTNTAIRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAI  714 (792)
Q Consensus       649 a~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~  714 (792)
                      ++......             ........|++.|+|||.+.+. .++.++||||||+++|||++   |+........  .
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~--~  237 (303)
T 1zy4_A          163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVN--I  237 (303)
T ss_dssp             CSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHH--H
T ss_pred             hhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHH--H
Confidence            98764321             1122345689999999999764 78999999999999999998   5543221110  0


Q ss_pred             HHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          715 LTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .     .....      .........+...+..+.+++.+||+.||.+|||++|+++
T Consensus       238 ~-----~~~~~------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  283 (303)
T 1zy4_A          238 L-----KKLRS------VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN  283 (303)
T ss_dssp             H-----HHHHS------TTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             H-----Hhccc------cccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence            0     00000      0011112223344567889999999999999999999998

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=1.5e-36  Score=335.77  Aligned_cols=259  Identities=22%  Similarity=0.222  Sum_probs=189.4

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCC------ceEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQ------NRLL  576 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~------~~~l  576 (792)
                      +.+.+.||+|+||+||+|.... + ..+|+|++.....    ...+|++++++++||||+++++++....      ..++
T Consensus        42 Y~~~~~lG~G~~g~V~~a~~~~-~-~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l  115 (394)
T 4e7w_A           42 YTNCKVIGNGSFGVVFQAKLVE-S-DEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL  115 (394)
T ss_dssp             EEEEEEEEEETTEEEEEEEETT-T-EEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred             EEEeEEEeeCCCeEEEEEEECC-C-CeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence            3456789999999999997643 3 3489998864322    2347999999999999999999985433      3789


Q ss_pred             EEEeccCCCccccc---cCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEc-CCCCeEEeecCCCccc
Q 003836          577 VYEFMSNGTVASFL---FGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLD-DHYNARISDFGLAKLL  652 (792)
Q Consensus       577 V~E~~~~gsL~~~l---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~-~~~~~kl~Dfg~a~~~  652 (792)
                      ||||++++.+....   .....+++..+..++.||++||+|||+.   +|+||||||+|||++ .++.+||+|||+++..
T Consensus       116 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~  192 (394)
T 4e7w_A          116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL  192 (394)
T ss_dssp             EEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             EeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence            99999875444332   2346789999999999999999999998   999999999999999 7999999999999876


Q ss_pred             cCCCCCccccccccCCcccccccccC-CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHH---------H--
Q 003836          653 TLDQSHTNTAIRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWA---------Y--  720 (792)
Q Consensus       653 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~---------~--  720 (792)
                      ....  ......+|+.|+|||.+.+. .++.++|||||||++|||++|+.||...........+....         .  
T Consensus       193 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~  270 (394)
T 4e7w_A          193 IAGE--PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMN  270 (394)
T ss_dssp             CTTC--CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHC
T ss_pred             cCCC--CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhC
Confidence            4332  22345689999999998764 58999999999999999999999997654322111111000         0  


Q ss_pred             HhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          721 DRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ..+.+...................+.++.+++.+||+.||++|||+.|+++.
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  322 (394)
T 4e7w_A          271 PNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH  322 (394)
T ss_dssp             GGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             hhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence            0000000000000001111122245688999999999999999999999975

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.6e-36  Score=326.79  Aligned_cols=245  Identities=25%  Similarity=0.377  Sum_probs=190.3

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhccc-CCCCcccccceecc------CCceEEE
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDE------GQNRLLV  577 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~------~~~~~lV  577 (792)
                      +.+.||+|+||.||+|... .+++.||||++... ....+.+.+|+.+++++ +||||+++++++..      ....++|
T Consensus        28 ~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv  105 (326)
T 2x7f_A           28 LVELVGNGTYGQVYKGRHV-KTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLV  105 (326)
T ss_dssp             EEEEEEEETTEEEEEEEET-TTCCEEEEEEEECC-SSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEE
T ss_pred             EEEEeccCCCEEEEEEEEC-CCCCeEEEEEEecC-cccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEE
Confidence            4578999999999999764 45679999998654 34467899999999999 89999999999976      4678999


Q ss_pred             EEeccCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCC
Q 003836          578 YEFMSNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD  655 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~  655 (792)
                      |||+++++|.+++...  ..+++..+..++.||+.||.|||+.   +|+|+||||+|||++.++.+||+|||++......
T Consensus       106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  182 (326)
T 2x7f_A          106 MEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT  182 (326)
T ss_dssp             EECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCTTTC-----
T ss_pred             EEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeCcCceecCcC
Confidence            9999999999999754  4688999999999999999999998   9999999999999999999999999999875432


Q ss_pred             CCCccccccccCCcccccccc-----cCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhH
Q 003836          656 QSHTNTAIRGTKGYVAPEWFR-----NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEA  730 (792)
Q Consensus       656 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  730 (792)
                      .. ......|++.|+|||.+.     ...++.++||||||+++|||++|+.||..........   .             
T Consensus       183 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~-------------  245 (326)
T 2x7f_A          183 VG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF---L-------------  245 (326)
T ss_dssp             ---------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH---H-------------
T ss_pred             cc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHH---H-------------
Confidence            21 223346899999999986     5678999999999999999999999996543221100   0             


Q ss_pred             hhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          731 LVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       731 ~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      +.............+..+.+++.+||+.||.+||+++|+++
T Consensus       246 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          246 IPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             HHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             hhcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            00000001111223467889999999999999999999987

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=8.9e-36  Score=319.77  Aligned_cols=262  Identities=20%  Similarity=0.250  Sum_probs=191.4

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceec--------------
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCD--------------  569 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~--------------  569 (792)
                      ...+.||+|+||.||+|... .+++.||+|++........+.+.+|++++++++||||+++++++.              
T Consensus        14 ~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~   92 (320)
T 2i6l_A           14 MDLKPLGCGGNGLVFSAVDN-DCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLT   92 (320)
T ss_dssp             EEEEECC-----CEEEEEET-TTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CC
T ss_pred             eEEEEeccCCCeEEEEEEEC-CCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccccc
Confidence            34578999999999999754 457899999998765666788999999999999999999998873              


Q ss_pred             cCCceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEc-CCCCeEEeecCC
Q 003836          570 EGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLD-DHYNARISDFGL  648 (792)
Q Consensus       570 ~~~~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~-~~~~~kl~Dfg~  648 (792)
                      +....++||||++ |+|.+++.. ..+++..+..++.||+.||+|||+.   +|+||||||+|||++ +++.+||+|||+
T Consensus        93 ~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~Dfg~  167 (320)
T 2i6l_A           93 ELNSVYIVQEYME-TDLANVLEQ-GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGL  167 (320)
T ss_dssp             SCSEEEEEEECCS-EEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEECCCTT
T ss_pred             ccCceeEEeeccC-CCHHHHhhc-CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEccCcc
Confidence            4467899999998 699999864 5688999999999999999999998   999999999999997 567999999999


Q ss_pred             CccccCCCC--CccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH-------
Q 003836          649 AKLLTLDQS--HTNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW-------  718 (792)
Q Consensus       649 a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~-------  718 (792)
                      ++.......  .......+++.|+|||.+.. ..++.++||||||+++|||++|+.||...............       
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  247 (320)
T 2i6l_A          168 ARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEE  247 (320)
T ss_dssp             CBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHH
T ss_pred             ccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchh
Confidence            987643222  12233457899999998865 67899999999999999999999999765432111111000       


Q ss_pred             HHHhhcccchhHhhhchhc-cc-----CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          719 AYDRYQERTLEALVENDLE-AM-----NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       719 ~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ...... ..+...+..... ..     .....+.++.+++.+||+.||++|||++|+++.
T Consensus       248 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  306 (320)
T 2i6l_A          248 DRQELL-SVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH  306 (320)
T ss_dssp             HHHHHH-TTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             hhhhhh-hcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence            000000 000000111100 00     011245678999999999999999999999873

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=8.1e-36  Score=327.39  Aligned_cols=258  Identities=21%  Similarity=0.255  Sum_probs=193.2

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccc--cchHHHHHHHHHhcccCCCCcccccceeccCCce------E
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ--DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNR------L  575 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~------~  575 (792)
                      .+.+.||+|+||+||+|... .+++.||||++.....  ...+.+.+|+.++++++||||+++++++...+..      +
T Consensus        45 ~~~~~lG~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~  123 (371)
T 4exu_A           45 VSPTHVGSGAYGSVCSAIDK-RSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY  123 (371)
T ss_dssp             EEEEEEEECSSEEEEEEEET-TTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCE
T ss_pred             EEEeEEecCCCeEEEEEEEC-CCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEE
Confidence            34578999999999999654 5678999999976432  2356789999999999999999999999877655      9


Q ss_pred             EEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCC
Q 003836          576 LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD  655 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~  655 (792)
                      +||||++ ++|.+++.  ..+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus       124 lv~e~~~-~~l~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~  197 (371)
T 4exu_A          124 LVMPFMQ-TDLQKIMG--MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAE  197 (371)
T ss_dssp             EEEECCC-EEHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC------
T ss_pred             EEEcccc-ccHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcccccccC
Confidence            9999998 58888774  3489999999999999999999999   9999999999999999999999999999865322


Q ss_pred             CCCccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH-------HHHhhcccc
Q 003836          656 QSHTNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW-------AYDRYQERT  727 (792)
Q Consensus       656 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~-------~~~~~~~~~  727 (792)
                          .....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||...............       .........
T Consensus       198 ----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  273 (371)
T 4exu_A          198 ----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKA  273 (371)
T ss_dssp             ------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHH
T ss_pred             ----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhh
Confidence                234568999999999877 78999999999999999999999999765322111111000       000000000


Q ss_pred             hhHhhhchhccc------CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          728 LEALVENDLEAM------NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       728 ~~~~~~~~~~~~------~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ............      .....+..+.+|+.+||+.||++|||++|+++.
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  324 (371)
T 4exu_A          274 AKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  324 (371)
T ss_dssp             HHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             hhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence            011110000000      011235678999999999999999999999975

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=1.5e-36  Score=330.87  Aligned_cols=263  Identities=17%  Similarity=0.224  Sum_probs=195.8

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccc-cchHHHHHHHHHhcccCCCCcccccceeccC-----CceEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEG-----QNRLLV  577 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~-----~~~~lV  577 (792)
                      .+.+.||+|+||.||+|... .+++.||||++..... .....+.+|++++++++||||+++++++...     ...++|
T Consensus        14 ~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv   92 (353)
T 2b9h_A           14 QLKSLLGEGAYGVVCSATHK-PTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYII   92 (353)
T ss_dssp             EEEEEEEECSSEEEEEEEET-TTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEE
T ss_pred             EEeeEEcCCCCeEEEEEEEC-CCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEE
Confidence            34578999999999999754 4568999999975332 3356788999999999999999999988654     678999


Q ss_pred             EEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC
Q 003836          578 YEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      |||++ ++|.+++.. ..+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++.......
T Consensus        93 ~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~  167 (353)
T 2b9h_A           93 QELMQ-TDLHRVIST-QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA  167 (353)
T ss_dssp             ECCCS-EEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred             EeccC-ccHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecccccccccccc
Confidence            99998 589888865 4689999999999999999999998   999999999999999999999999999987653221


Q ss_pred             C---------ccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcc--
Q 003836          658 H---------TNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQE--  725 (792)
Q Consensus       658 ~---------~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--  725 (792)
                      .         ......||+.|+|||.+.. ..++.++|||||||++|||++|+.||......................  
T Consensus       168 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  247 (353)
T 2b9h_A          168 DNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDND  247 (353)
T ss_dssp             ------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTT
T ss_pred             cccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhcc
Confidence            1         1123468999999998764 779999999999999999999999997654321111110000000000  


Q ss_pred             ------cchhHhhhchhc-c-----cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          726 ------RTLEALVENDLE-A-----MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       726 ------~~~~~~~~~~~~-~-----~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                            ......+..... .     ......+.++.+++.+||+.||++|||++|+++.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  306 (353)
T 2b9h_A          248 LRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH  306 (353)
T ss_dssp             TTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             ccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence                  000111110000 0     0011345678899999999999999999999974

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=1.9e-36  Score=337.63  Aligned_cols=254  Identities=23%  Similarity=0.240  Sum_probs=188.8

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccC------CceEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEG------QNRLLV  577 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~------~~~~lV  577 (792)
                      .+.+.||+|+||.||+|... .+++.||||++....    ..+.+|++++++++|+||+++++++...      ...++|
T Consensus        57 ~~~~~lG~G~fg~Vy~~~~~-~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv  131 (420)
T 1j1b_A           57 TDTKVIGNGSFGVVYQAKLC-DSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV  131 (420)
T ss_dssp             EEEEEEEECSSEEEEEEEET-TTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEE
T ss_pred             EeeeEEeeCCCEEEEEEEEC-CCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEee
Confidence            34578999999999999764 456799999986532    2345799999999999999999988432      236799


Q ss_pred             EEeccCCCcccccc----CCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC-CCeEEeecCCCccc
Q 003836          578 YEFMSNGTVASFLF----GDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH-YNARISDFGLAKLL  652 (792)
Q Consensus       578 ~E~~~~gsL~~~l~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~-~~~kl~Dfg~a~~~  652 (792)
                      |||+++ +|.+.+.    ....+++..+..++.||++||+|||+.   +|+||||||+|||++.+ +.+||+|||+++..
T Consensus       132 ~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~  207 (420)
T 1j1b_A          132 LDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL  207 (420)
T ss_dssp             EECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             hhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhhhc
Confidence            999986 5555443    346789999999999999999999998   99999999999999965 56899999999876


Q ss_pred             cCCCCCccccccccCCcccccccccC-CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHh
Q 003836          653 TLDQSHTNTAIRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEAL  731 (792)
Q Consensus       653 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  731 (792)
                      ....  ......||+.|+|||++.+. .++.++|||||||++|||++|+.||...........+   .. .......+.+
T Consensus       208 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i---~~-~lg~p~~~~~  281 (420)
T 1j1b_A          208 VRGE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI---IK-VLGTPTREQI  281 (420)
T ss_dssp             CTTC--CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---HH-HHCSCCHHHH
T ss_pred             ccCC--CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---HH-HhCCCCHHHH
Confidence            4332  22345689999999998764 7999999999999999999999999765332111111   00 0000000000


Q ss_pred             --hh--------c-----hhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          732 --VE--------N-----DLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       732 --~~--------~-----~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                        +.        +     .+........+.++.+|+.+||+.||++|||+.|+++.
T Consensus       282 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h  337 (420)
T 1j1b_A          282 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH  337 (420)
T ss_dssp             HHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence              00        0     00011122335678999999999999999999999864

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=4.8e-36  Score=317.06  Aligned_cols=252  Identities=23%  Similarity=0.293  Sum_probs=201.2

Q ss_pred             HHHHhhhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEE
Q 003836          499 VEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLL  576 (792)
Q Consensus       499 ~~~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~l  576 (792)
                      ....+.+.+.||+|+||.||++... .+++.||+|++....  ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus        20 ~~~~y~i~~~lg~G~~g~V~~~~~~-~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   98 (287)
T 2wei_A           20 FAERYNIVCMLGKGSFGEVLKCKDR-ITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI   98 (287)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             HhhcceeeEEEcCCCCEEEEEEEEc-CCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence            3445566789999999999999754 456789999986532  3346789999999999999999999999999999999


Q ss_pred             EEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC---CCeEEeecCCCcccc
Q 003836          577 VYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH---YNARISDFGLAKLLT  653 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~---~~~kl~Dfg~a~~~~  653 (792)
                      |+||+++++|.+++.....+++..+..++.||+.||.|||+.   +|+|+||||+|||++.+   +.+||+|||+++...
T Consensus        99 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~  175 (287)
T 2wei_A           99 VGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ  175 (287)
T ss_dssp             EECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred             EEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence            999999999999998777899999999999999999999998   99999999999999764   469999999998764


Q ss_pred             CCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhh
Q 003836          654 LDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVE  733 (792)
Q Consensus       654 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  733 (792)
                      ....  .....+++.|+|||.+.+ .++.++||||||+++|+|++|+.||........   ...     .......    
T Consensus       176 ~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~---~~~-----~~~~~~~----  240 (287)
T 2wei_A          176 QNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI---LKR-----VETGKYA----  240 (287)
T ss_dssp             CCSS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHH-----HHHCCCC----
T ss_pred             CCCc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHH---HHH-----HHcCCCC----
Confidence            3322  223458899999998875 489999999999999999999999975432110   000     0000000    


Q ss_pred             chhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          734 NDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       734 ~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                        .........+.++.+++.+||+.+|++|||++|+++
T Consensus       241 --~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          241 --FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             --CCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --CCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence              000001123467889999999999999999999997

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=2.3e-36  Score=323.74  Aligned_cols=248  Identities=21%  Similarity=0.328  Sum_probs=193.3

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccC--CCCcccccceeccCCceEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTH--HKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~--h~niv~l~g~~~~~~~~~lV~  578 (792)
                      +.+.+.||+|+||.||++...  +++.||||++....  ....+.+.+|++++.+++  |+||+++++++.+.+..++||
T Consensus        30 y~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  107 (313)
T 3cek_A           30 YSILKQIGSGGSSKVFQVLNE--KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  107 (313)
T ss_dssp             EEEEEEEECCSSEEEEEEECT--TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEE
T ss_pred             EEEEEEecCCCCEEEEEEEcC--CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEE
Confidence            344578999999999999754  36789999986532  334578899999999997  599999999999999999999


Q ss_pred             EeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          579 EFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       579 E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      | +.+++|.+++.....+++..+..++.||++||.|||+.   +|+||||||+|||+++ +.+||+|||+++........
T Consensus       108 e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~  182 (313)
T 3cek_A          108 E-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTS  182 (313)
T ss_dssp             C-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC-------
T ss_pred             e-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccccCcccc
Confidence            9 67889999998888899999999999999999999999   9999999999999975 79999999999876543322


Q ss_pred             -ccccccccCCccccccccc-----------CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhccc
Q 003836          659 -TNTAIRGTKGYVAPEWFRN-----------MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQER  726 (792)
Q Consensus       659 -~~~~~~gt~~y~aPE~~~~-----------~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~  726 (792)
                       ......|++.|+|||.+.+           ..++.++||||||+++|||++|+.||.........              
T Consensus       183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~--------------  248 (313)
T 3cek_A          183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK--------------  248 (313)
T ss_dssp             -------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH--------------
T ss_pred             ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHH--------------
Confidence             2234568999999999865           47889999999999999999999999654322110              


Q ss_pred             chhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          727 TLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       727 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                       +..+++.......+......+.+++.+||+.||++||+++|+++.
T Consensus       249 -~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  293 (313)
T 3cek_A          249 -LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH  293 (313)
T ss_dssp             -HHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             -HHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence             111122222222222234678899999999999999999999874

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=7.9e-36  Score=325.10  Aligned_cols=261  Identities=20%  Similarity=0.290  Sum_probs=198.1

Q ss_pred             HhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCC------cccccceeccCCceE
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKN------LVRLLGYCDEGQNRL  575 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~n------iv~l~g~~~~~~~~~  575 (792)
                      .+.+.+.||+|+||+||++......++.||+|+++.. ....+.+.+|+.++++++|++      ++.+++++...+..+
T Consensus        20 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~   98 (355)
T 2eu9_A           20 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMC   98 (355)
T ss_dssp             TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEE
T ss_pred             cEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEE
Confidence            3455678999999999999765554578999999753 334567889999999997766      899999999999999


Q ss_pred             EEEEeccCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEE------------------
Q 003836          576 LVYEFMSNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILL------------------  635 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl------------------  635 (792)
                      +||||+ +++|.+++...  ..+++..+..++.||+.||+|||+.   +|+||||||+|||+                  
T Consensus        99 lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~  174 (355)
T 2eu9_A           99 IAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEK  174 (355)
T ss_dssp             EEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CCCEE
T ss_pred             EEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccccccccc
Confidence            999999 55666666544  4689999999999999999999998   99999999999999                  


Q ss_pred             -cCCCCeEEeecCCCccccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhh
Q 003836          636 -DDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAI  714 (792)
Q Consensus       636 -~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~  714 (792)
                       +.++.+||+|||+++.....    .....||+.|+|||.+.+..++.++|||||||++|||++|+.||...........
T Consensus       175 ~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~  250 (355)
T 2eu9_A          175 SVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVM  250 (355)
T ss_dssp             EESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred             ccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence             56889999999999864322    2345689999999999999999999999999999999999999976543221111


Q ss_pred             HHHHH-------HHhhcccc--------------hhHhhhch-----hcccCCHHHHHHHHHHHHHccccCCCCCCCHHh
Q 003836          715 LTDWA-------YDRYQERT--------------LEALVEND-----LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRK  768 (792)
Q Consensus       715 ~~~~~-------~~~~~~~~--------------~~~~~~~~-----~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~e  768 (792)
                      +....       ........              ........     ............+.+++.+||+.||++|||++|
T Consensus       251 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e  330 (355)
T 2eu9_A          251 MEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAE  330 (355)
T ss_dssp             HHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHH
Confidence            10000       00000000              00000000     001122345678999999999999999999999


Q ss_pred             HHH
Q 003836          769 VTQ  771 (792)
Q Consensus       769 vl~  771 (792)
                      +++
T Consensus       331 ~l~  333 (355)
T 2eu9_A          331 ALL  333 (355)
T ss_dssp             HTT
T ss_pred             Hhc
Confidence            986

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=5.7e-36  Score=331.59  Aligned_cols=259  Identities=19%  Similarity=0.227  Sum_probs=197.9

Q ss_pred             HHhhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccC--------CCCcccccceec---
Q 003836          501 VTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH--------HKNLVRLLGYCD---  569 (792)
Q Consensus       501 ~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~--------h~niv~l~g~~~---  569 (792)
                      ..+.+.++||+|+||+||++... .+++.||||++... ....+.+.+|++++++++        |+||+++++++.   
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~  114 (397)
T 1wak_A           37 GRYHVIRKLGWGHFSTVWLSWDI-QGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG  114 (397)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred             CeEEEEEEeeecCCeeEEEEEec-CCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence            34556688999999999999654 45789999999753 334567899999999985        788999999987   


Q ss_pred             -cCCceEEEEEeccCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCC-------
Q 003836          570 -EGQNRLLVYEFMSNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY-------  639 (792)
Q Consensus       570 -~~~~~~lV~E~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~-------  639 (792)
                       +....++||||+. ++|.+++...  ..+++..+..|+.||+.||+|||+++  +|+||||||+|||++.++       
T Consensus       115 ~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~~  191 (397)
T 1wak_A          115 VNGTHICMVFEVLG-HHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRLA  191 (397)
T ss_dssp             TTEEEEEEEECCCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHHH
T ss_pred             CCCceEEEEEeccC-ccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhhh
Confidence             6668899999995 5555555433  56899999999999999999999952  899999999999999775       


Q ss_pred             ------------------------------------------CeEEeecCCCccccCCCCCccccccccCCccccccccc
Q 003836          640 ------------------------------------------NARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN  677 (792)
Q Consensus       640 ------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~  677 (792)
                                                                .+||+|||+++.....    .....||+.|+|||++.+
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~~~  267 (397)
T 1wak_A          192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVLIG  267 (397)
T ss_dssp             HHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHHHT
T ss_pred             hhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhhcC
Confidence                                                      8999999999876432    233468999999999999


Q ss_pred             CCCCcccceehHHHHHHHHHhcCcCCCcchhhhh---hhhHHHHHHHhhcccch--------------------------
Q 003836          678 MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVD---KAILTDWAYDRYQERTL--------------------------  728 (792)
Q Consensus       678 ~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~--------------------------  728 (792)
                      ..++.++|||||||++|||++|+.||........   ...+.. ..........                          
T Consensus       268 ~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (397)
T 1wak_A          268 SGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIAL-IIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLK  346 (397)
T ss_dssp             SCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHH-HHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCC
T ss_pred             CCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHH-HHHhcCCCChHHhhcccccccccCCccccccccccC
Confidence            9999999999999999999999999975432110   000000 0000000000                          


Q ss_pred             ----hHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          729 ----EALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       729 ----~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                          ...+..  ....+......+.+|+.+||+.||++|||++|+++
T Consensus       347 ~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          347 PWGLFEVLVE--KYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             CCCHHHHHHH--TSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             CcchhHhhhh--hcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence                000000  11235677889999999999999999999999997

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=2.4e-36  Score=330.19  Aligned_cols=262  Identities=21%  Similarity=0.223  Sum_probs=182.5

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCc-------eEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQN-------RLL  576 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~-------~~l  576 (792)
                      .+.+.||+|+||+||+|... .+++.||||++... ......+.+|++.+..++||||+++++++.....       .++
T Consensus        26 ~~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~l  103 (360)
T 3e3p_A           26 QVERMAGQGTFGTVQLGKEK-STGMSVAIKKVIQD-PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNV  103 (360)
T ss_dssp             EEC----------CEEEEET-TTCCEEEEEEEECC-TTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEE
T ss_pred             EEEEEEecCCCeEEEEEEEC-CCCCEEEEEEEecC-ccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEE
Confidence            34578999999999999754 45679999998653 2334466778888899999999999999855332       789


Q ss_pred             EEEeccCCCcc---ccccCCCCCchhHHHHHHHHHHHHHHHHh--hccCCCeEecCCCCCcEEEcC-CCCeEEeecCCCc
Q 003836          577 VYEFMSNGTVA---SFLFGDSKPNWKLRTEIAMGIAGGLFYLH--EECCTQIIHCDIKPQNILLDD-HYNARISDFGLAK  650 (792)
Q Consensus       577 V~E~~~~gsL~---~~l~~~~~l~~~~~~~i~~~ia~gL~yLH--~~~~~~ivH~dikp~NILl~~-~~~~kl~Dfg~a~  650 (792)
                      ||||++++.+.   .++.....+++..+..++.||+.||.|||  +.   +|+||||||+|||++. ++.+||+|||+++
T Consensus       104 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~  180 (360)
T 3e3p_A          104 VMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGTLKLCDFGSAK  180 (360)
T ss_dssp             EEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTEEEECCCTTCB
T ss_pred             EeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCcEEEeeCCCce
Confidence            99999875322   33345567889999999999999999999  77   9999999999999997 8999999999998


Q ss_pred             cccCCCCCccccccccCCcccccccccC-CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH-------HHHh
Q 003836          651 LLTLDQSHTNTAIRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW-------AYDR  722 (792)
Q Consensus       651 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~-------~~~~  722 (792)
                      ......  ......||+.|+|||.+.+. .++.++|||||||++|||++|+.||...........+...       ....
T Consensus       181 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (360)
T 3e3p_A          181 KLSPSE--PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRK  258 (360)
T ss_dssp             CCCTTS--CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHH
T ss_pred             ecCCCC--CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHh
Confidence            765332  22345689999999998654 4899999999999999999999999765432211111100       0000


Q ss_pred             hccc-chhHhhh------chhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          723 YQER-TLEALVE------NDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       723 ~~~~-~~~~~~~------~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .... .......      ...........+..+.+++.+||+.||.+|||+.|+++.
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h  315 (360)
T 3e3p_A          259 LNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH  315 (360)
T ss_dssp             HCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             cccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence            0000 0000000      000011122246789999999999999999999999975

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.4e-36  Score=323.40  Aligned_cols=245  Identities=23%  Similarity=0.353  Sum_probs=192.5

Q ss_pred             HHHHHHhhhhhhcCccccceEEEeeecCCCceEEEEEEccccccc------chHHHHHHHHHhccc----CCCCcccccc
Q 003836          497 ELVEVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD------SEKEFKAEVNGIGQT----HHKNLVRLLG  566 (792)
Q Consensus       497 el~~~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~------~~~~~~~Ei~~l~~l----~h~niv~l~g  566 (792)
                      +.....+.+.+.||+|+||.||+|... .+++.||||++......      ....+.+|+.++.++    +|+||+++++
T Consensus        27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~  105 (312)
T 2iwi_A           27 EAFEAEYRLGPLLGKGGFGTVFAGHRL-TDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD  105 (312)
T ss_dssp             ------CEEEEEEEEETTEEEEEEECT-TTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred             hhhhhceEEeeEEEcCCCEEEEEEEEc-cCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence            333445666789999999999999653 45679999999754321      223456788888888    8999999999


Q ss_pred             eeccCCceEEEEEe-ccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEc-CCCCeEEe
Q 003836          567 YCDEGQNRLLVYEF-MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLD-DHYNARIS  644 (792)
Q Consensus       567 ~~~~~~~~~lV~E~-~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~-~~~~~kl~  644 (792)
                      ++.+.+..++|+|| +++++|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++ +++.+||+
T Consensus       106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~  182 (312)
T 2iwi_A          106 WFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLI  182 (312)
T ss_dssp             EC-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEEC
T ss_pred             EEecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEEE
Confidence            99999999999999 78999999998877899999999999999999999999   999999999999999 88999999


Q ss_pred             ecCCCccccCCCCCccccccccCCcccccccccCCCC-cccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhh
Q 003836          645 DFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT-VKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRY  723 (792)
Q Consensus       645 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~  723 (792)
                      |||+++......   .....|++.|+|||.+.+..+. .++||||||+++|||++|+.||.......             
T Consensus       183 dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-------------  246 (312)
T 2iwi_A          183 DFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEIL-------------  246 (312)
T ss_dssp             CCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHH-------------
T ss_pred             EcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHh-------------
Confidence            999998765332   2345689999999998876664 58999999999999999999996532110             


Q ss_pred             cccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          724 QERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       724 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                               ...  ...+.....++.+++.+||+.+|++|||++|+++.
T Consensus       247 ---------~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  284 (312)
T 2iwi_A          247 ---------EAE--LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD  284 (312)
T ss_dssp             ---------HTC--CCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             ---------hhc--cCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                     000  01122344578899999999999999999999984

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=1.8e-35  Score=322.53  Aligned_cols=258  Identities=21%  Similarity=0.252  Sum_probs=193.2

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccc--cchHHHHHHHHHhcccCCCCcccccceeccCCc------eE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ--DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQN------RL  575 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~------~~  575 (792)
                      .+.+.||+|+||.||+|... .+++.||||++.....  ...+.+.+|+.++++++||||+++++++.....      .+
T Consensus        27 ~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~  105 (353)
T 3coi_A           27 VSPTHVGSGAYGSVCSAIDK-RSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY  105 (353)
T ss_dssp             EEEEEEEECSSEEEEEEEET-TTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCE
T ss_pred             EEeeeEecCCCeEEEEEEEC-CCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEE
Confidence            34578999999999999754 4678999999975432  234678999999999999999999999987654      49


Q ss_pred             EEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCC
Q 003836          576 LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD  655 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~  655 (792)
                      +||||++ ++|.+++..  .+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++.....
T Consensus       106 lv~e~~~-~~l~~~~~~--~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  179 (353)
T 3coi_A          106 LVMPFMQ-TDLQKIMGL--KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAE  179 (353)
T ss_dssp             EEEECCS-EEGGGTTTS--CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC----
T ss_pred             EEecccc-CCHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccCCCCC
Confidence            9999998 588888753  488999999999999999999998   9999999999999999999999999999865322


Q ss_pred             CCCccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH-------HHHhhcccc
Q 003836          656 QSHTNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW-------AYDRYQERT  727 (792)
Q Consensus       656 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~-------~~~~~~~~~  727 (792)
                          .....+|+.|+|||.+.+ ..++.++||||||+++|||++|+.||...............       ......+..
T Consensus       180 ----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  255 (353)
T 3coi_A          180 ----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKA  255 (353)
T ss_dssp             --------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHH
T ss_pred             ----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHH
Confidence                234568999999999876 67899999999999999999999999764322111000000       000000000


Q ss_pred             hhHhhhchh---c---ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          728 LEALVENDL---E---AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       728 ~~~~~~~~~---~---~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ....+....   .   .......+..+.+++.+||+.||++|||++|+++.
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h  306 (353)
T 3coi_A          256 AKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH  306 (353)
T ss_dssp             HHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            011111000   0   00112346788999999999999999999999874

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=2.4e-35  Score=324.97  Aligned_cols=197  Identities=25%  Similarity=0.351  Sum_probs=165.8

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccC-CC-----CcccccceeccCCceEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH-HK-----NLVRLLGYCDEGQNRLL  576 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-h~-----niv~l~g~~~~~~~~~l  576 (792)
                      +.+.+.||+|+||+||+|... .+++.||||+++.. .....++.+|+++++.++ |+     +|+++++++...+..++
T Consensus        56 y~~~~~lG~G~~g~V~~~~~~-~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  133 (382)
T 2vx3_A           56 YEIDSLIGKGSFGQVVKAYDR-VEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCL  133 (382)
T ss_dssp             EEEEEEEEEETTEEEEEEEET-TTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEE
T ss_pred             EEEEEEEeecCCEEEEEEEEc-CCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEE
Confidence            445578999999999999754 45689999999753 334567788888888874 44     49999999999999999


Q ss_pred             EEEeccCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEc--CCCCeEEeecCCCccc
Q 003836          577 VYEFMSNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLD--DHYNARISDFGLAKLL  652 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~--~~~~~kl~Dfg~a~~~  652 (792)
                      ||||++ ++|.+++...  ..+++..+..++.||+.||.|||.+ ..+|+||||||+|||++  .++.+||+|||+++..
T Consensus       134 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~  211 (382)
T 2vx3_A          134 VFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL  211 (382)
T ss_dssp             EEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred             EEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCceec
Confidence            999996 4999998765  4689999999999999999999952 13899999999999995  5788999999999876


Q ss_pred             cCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcch
Q 003836          653 TLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEI  707 (792)
Q Consensus       653 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~  707 (792)
                      ...    .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus       212 ~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~  262 (382)
T 2vx3_A          212 GQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN  262 (382)
T ss_dssp             TCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             ccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            432    234568999999999999999999999999999999999999997653

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=2.3e-36  Score=324.89  Aligned_cols=239  Identities=23%  Similarity=0.385  Sum_probs=196.9

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccccc------chHHHHHHHHHhcccC--CCCcccccceeccCCce
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD------SEKEFKAEVNGIGQTH--HKNLVRLLGYCDEGQNR  574 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~------~~~~~~~Ei~~l~~l~--h~niv~l~g~~~~~~~~  574 (792)
                      +.+.+.||+|+||.||+|... .+++.||||++......      ..+.+.+|+.++++++  |+||+++++++.+.+..
T Consensus        45 y~~~~~lg~G~~g~Vy~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~  123 (320)
T 3a99_A           45 YQVGPLLGSGGFGSVYSGIRV-SDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSF  123 (320)
T ss_dssp             EEEEEECSSSSSCEEEEEEET-TTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEE
T ss_pred             eEEEEEEeeCCCeEEEEEEEC-CCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcE
Confidence            445678999999999999653 45689999998754321      2346778999999996  59999999999999999


Q ss_pred             EEEEEeccC-CCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEc-CCCCeEEeecCCCccc
Q 003836          575 LLVYEFMSN-GTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLD-DHYNARISDFGLAKLL  652 (792)
Q Consensus       575 ~lV~E~~~~-gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~-~~~~~kl~Dfg~a~~~  652 (792)
                      ++|+|++.+ ++|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++ +++.+||+|||+++..
T Consensus       124 ~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~  200 (320)
T 3a99_A          124 VLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL  200 (320)
T ss_dssp             EEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             EEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCcccccc
Confidence            999999986 89999998878899999999999999999999998   999999999999999 7899999999999876


Q ss_pred             cCCCCCccccccccCCcccccccccCCC-CcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHh
Q 003836          653 TLDQSHTNTAIRGTKGYVAPEWFRNMPI-TVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEAL  731 (792)
Q Consensus       653 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  731 (792)
                      ...   ......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||........                    
T Consensus       201 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~--------------------  257 (320)
T 3a99_A          201 KDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIR--------------------  257 (320)
T ss_dssp             CSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHH--------------------
T ss_pred             ccc---cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhhc--------------------
Confidence            532   2233568999999999987665 6889999999999999999999965321100                    


Q ss_pred             hhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          732 VENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       732 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                        ..  ...+...+.++.+++.+||+.||++|||++||++.
T Consensus       258 --~~--~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h  294 (320)
T 3a99_A          258 --GQ--VFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH  294 (320)
T ss_dssp             --CC--CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             --cc--ccccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence              00  00111234578899999999999999999999973

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=2.6e-35  Score=323.57  Aligned_cols=265  Identities=20%  Similarity=0.269  Sum_probs=199.4

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccC-----------CCCcccccceeccC
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH-----------HKNLVRLLGYCDEG  571 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-----------h~niv~l~g~~~~~  571 (792)
                      +.+.+.||+|+||+||+|... .+++.||||++... ....+.+.+|+.++++++           |+||+++++++...
T Consensus        21 y~~~~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~   98 (373)
T 1q8y_A           21 YILVRKLGWGHFSTVWLAKDM-VNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   98 (373)
T ss_dssp             EEEEEEEEECSSEEEEEEEET-TTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             EEEEEeeeecCCeEEEEEEec-CCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhcc
Confidence            455688999999999999753 45789999998753 334567889999999886           89999999999765


Q ss_pred             C----ceEEEEEeccCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEc------CCC
Q 003836          572 Q----NRLLVYEFMSNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLD------DHY  639 (792)
Q Consensus       572 ~----~~~lV~E~~~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~------~~~  639 (792)
                      +    ..++||||+ +++|.+++...  ..+++..+..++.||+.||+|||++  .+|+||||||+|||++      ..+
T Consensus        99 ~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~--~~ivH~Dikp~NIll~~~~~~~~~~  175 (373)
T 1q8y_A           99 GPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRR--CGIIHTDIKPENVLMEIVDSPENLI  175 (373)
T ss_dssp             ETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHT--TCEECSCCSGGGEEEEEEETTTTEE
T ss_pred             CCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChHHeEEeccCCCcCcc
Confidence            4    788999999 88999998753  4589999999999999999999995  2899999999999994      445


Q ss_pred             CeEEeecCCCccccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhh---hhhhHH
Q 003836          640 NARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKV---DKAILT  716 (792)
Q Consensus       640 ~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~---~~~~~~  716 (792)
                      .+||+|||+++.....    .....||+.|+|||.+.+..++.++|||||||++|||++|+.||.......   ....+.
T Consensus       176 ~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~  251 (373)
T 1q8y_A          176 QIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA  251 (373)
T ss_dssp             EEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHH
T ss_pred             eEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHH
Confidence            7999999999876432    233468999999999999999999999999999999999999997543211   000000


Q ss_pred             HHHHHhhcc--------c----------------------chhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCH
Q 003836          717 DWAYDRYQE--------R----------------------TLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTM  766 (792)
Q Consensus       717 ~~~~~~~~~--------~----------------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~  766 (792)
                      ... .....        .                      .+......  ....+.....++.+|+.+||+.||++|||+
T Consensus       252 ~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~  328 (373)
T 1q8y_A          252 QII-ELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTE--KYKFSKDEAKEISDFLSPMLQLDPRKRADA  328 (373)
T ss_dssp             HHH-HHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHH--TTCCCHHHHHHHHHHHGGGGCSSTTTCBCH
T ss_pred             HHH-HhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhh--cccCCcchHHHHHHHHHHHhccCccccCCH
Confidence            000 00000        0                      00111111  112456778899999999999999999999


Q ss_pred             HhHHHH--hccCcCC
Q 003836          767 RKVTQM--LEGVVEV  779 (792)
Q Consensus       767 ~evl~~--L~~~~~~  779 (792)
                      +|+++.  +.+....
T Consensus       329 ~ell~hp~f~~~~~~  343 (373)
T 1q8y_A          329 GGLVNHPWLKDTLGM  343 (373)
T ss_dssp             HHHHTCGGGTTCTTC
T ss_pred             HHHhhChhhhcccCc
Confidence            999984  4544433

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1

Probab=100.00  E-value=6.4e-35  Score=297.36  Aligned_cols=212  Identities=18%  Similarity=0.217  Sum_probs=163.4

Q ss_pred             cccCcccCCcceeecCCCCceecCCCeEEEeeeecCCCCceEEEEEeecCCCCcEEEEecCCCCCCCCeeEEEEeCccEE
Q 003836           21 QSNGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAVNPAPRGSKLRLTANRGLV  100 (792)
Q Consensus        21 ~~~~~i~~g~~l~~~~~~~~lvS~~g~F~lGF~~~~~~~~~~~gIW~~~~~~~tvvWvANr~~P~~~~~~l~~~~~G~Lv  100 (792)
                      ++.|+|.+|++|++++   +|  ++|.|+|||+.+++.      ++|..   +|+||+|||+.|  .++.|+|+.|||||
T Consensus         6 ~~~~~i~~g~~L~~g~---~l--~~g~f~l~f~~~gnl------~ly~~---~~~vW~an~~~~--~~~~l~l~~dGnLv   69 (236)
T 1dlp_A            6 GLSHEGSHPQTLHAAQ---SL--ELSSFRFTMQSDCNL------VLFDS---DVRVWASNTAGA--TGCRAVLQSDGLLV   69 (236)
T ss_dssp             CSSSSSCSCSCCCTTC---EE--CSTTEEEEECTTSCE------EEEES---SSEEECCCCCSC--SCCBCCBCSSSCBC
T ss_pred             eccceeCCCCEECCCC---EE--EcCCEEEEECCCCcE------EEEEC---CEEEEECCCCCC--CCeEEEEcCCCcEE
Confidence            4568999999998654   66  599999999876542      23443   799999999999  66789999999999


Q ss_pred             EEcCCCCEEEEeccCCC-cceeEEEecCCcEEEEecCCccccccccCCcccc----------cCCCccccc-eEEeeecc
Q 003836          101 LEDPEGREIWKSEISTG-QAAFGVLYDTGNFLIVNTNSERLWQSFDHPTDTL----------LPTQTMERG-GVVSSRRK  168 (792)
Q Consensus       101 l~~~~~~~vWst~~~~~-~~~~a~LldsGNlVl~~~~~~~lWQSFd~PtDtl----------Lpg~~l~~~-~~L~S~~s  168 (792)
                      |+|++|++||+|+++.. +..+|+|+|+|||||+++   ++||||||||||+          +|||+++.+ ++|++   
T Consensus        70 l~d~~~~~vW~s~~~~~~~~~~~~l~d~Gnlvl~~~---~~W~S~~~p~~t~~lp~~g~d~L~~gq~~~~~~~~L~s---  143 (236)
T 1dlp_A           70 ILTAQNTIRWSSGTKGSIGNYVLVLQPDRTVTIYGP---GLWDSGTSNKGSVVVANNGNSILYSTQGNDNHPQTLHA---  143 (236)
T ss_dssp             CBCTTTCCSCCCCCCCCSSCCEEEECSSSCEEEECS---EEEECSCCCSSCCCCSSCCCEECCCC--CCCCCCEECS---
T ss_pred             EEcCCCcEEEeCCccccCCcEEEEEeCCCCEEEecC---CEEECCCCCCcccccCCccceEEecCCcCCCccceEEc---
Confidence            99999999999998643 345899999999999964   8999999998655          777766554 46764   


Q ss_pred             CCCCCCCceeEeecCCCceeeeeeccCCCcccccccccCCcccccCCCcceeEEccCCcEEEEecccceeeecccccccc
Q 003836          169 DTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWSNTFDTNRSNAGYRVVFNESGQLYVLRENKQRASLVPETVSAK  248 (792)
Q Consensus       169 ~~~~s~G~~~~~~~~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  248 (792)
                      ..||++|.|+++++++|+++++  +..     .+||.++++...   ....+.++.+|.++++..++++++.+... ...
T Consensus       144 ~~d~s~G~~~l~l~~dG~LvL~--~~~-----~~~W~s~~~~~~---~~~~~~L~~~Gnl~ly~~~~~~vw~s~~~-~~~  212 (236)
T 1dlp_A          144 TQSLQLSPYRLSMETDCNLVLF--DRD-----DRVWSTNTAGKG---TGCRAVLQPNGRMDVLTNQNIAVWTSGNS-RSA  212 (236)
T ss_dssp             SCCCBCSSCEEEEETTTEEEEE--BTT-----BCCSCCCCCSSC---SSCEEEEETTTEEEEEETTTEEEEECCCC-CSS
T ss_pred             CcEeecCcEEEEECCCCcEEEE--cCC-----EeEEeCCCcCCC---CceEEEECCCCcEEEEeCCCcEEEEeCCC-CCC
Confidence            6789999999999999976553  332     468988877432   33456788889888887666666655322 222


Q ss_pred             ccEEEEEEecCCcEEEEe
Q 003836          249 ENYLRATLNFDGVFIFYS  266 (792)
Q Consensus       249 ~~~~r~~L~~dG~l~~y~  266 (792)
                       ..+|++|++||++++|.
T Consensus       213 -~~~rl~Ld~dG~l~ly~  229 (236)
T 1dlp_A          213 -GRYVFVLQPDRNLAIYG  229 (236)
T ss_dssp             -SCCEEEECSSSCEEEEC
T ss_pred             -CCEEEEEcCCCcEEEeC
Confidence             35899999999999995

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=2.2e-35  Score=330.59  Aligned_cols=244  Identities=25%  Similarity=0.315  Sum_probs=183.9

Q ss_pred             hhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEEEeccCC
Q 003836          506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYEFMSNG  584 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~E~~~~g  584 (792)
                      .+.||+|+||+||.+..  .+++.||||++...   ..+.+.+|++++.++ +||||+++++++.+.+..++||||++ |
T Consensus        20 ~~~LG~G~~g~V~~~~~--~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-g   93 (434)
T 2rio_A           20 EKILGYGSSGTVVFQGS--FQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-L   93 (434)
T ss_dssp             EEEEEECSTTCEEEEEE--SSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-E
T ss_pred             cCeEeeCCCeEEEEEEE--ECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-C
Confidence            36799999999976532  34679999998642   345678999999886 89999999999999999999999996 6


Q ss_pred             CccccccCCCCC-------chhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC-------------CCeEEe
Q 003836          585 TVASFLFGDSKP-------NWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH-------------YNARIS  644 (792)
Q Consensus       585 sL~~~l~~~~~l-------~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~-------------~~~kl~  644 (792)
                      +|.+++......       .+..+..++.||+.||+|||+.   +|+||||||+|||++.+             +.+||+
T Consensus        94 sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~  170 (434)
T 2rio_A           94 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS  170 (434)
T ss_dssp             EHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEEC
T ss_pred             CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEEEc
Confidence            999999765322       3445678999999999999998   99999999999999754             489999


Q ss_pred             ecCCCccccCCCCC---ccccccccCCccccccccc-------CCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhh
Q 003836          645 DFGLAKLLTLDQSH---TNTAIRGTKGYVAPEWFRN-------MPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKA  713 (792)
Q Consensus       645 Dfg~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~  713 (792)
                      |||+++........   ......||+.|+|||++.+       ..++.++|||||||++|||++ |+.||........  
T Consensus       171 DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~--  248 (434)
T 2rio_A          171 DFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES--  248 (434)
T ss_dssp             CCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHH--
T ss_pred             ccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHH--
Confidence            99999987544322   1234569999999999865       678999999999999999999 8999865432211  


Q ss_pred             hHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          714 ILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                         .........        +......+...+.++.+++.+||+.||++|||+.||++
T Consensus       249 ---~i~~~~~~~--------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          249 ---NIIRGIFSL--------DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             ---HHHHTCCCC--------CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ---HHhcCCCCc--------ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence               000000000        11112224566788999999999999999999999986

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=1.5e-35  Score=320.58  Aligned_cols=243  Identities=21%  Similarity=0.254  Sum_probs=168.1

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceecc----CCceEEEEEecc
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDE----GQNRLLVYEFMS  582 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~----~~~~~lV~E~~~  582 (792)
                      +.||+|+||+||++... .+++.||||++...    .....+....++.++||||+++++++..    ....++||||++
T Consensus        35 ~~lG~G~~g~V~~~~~~-~~~~~vavK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~  109 (336)
T 3fhr_A           35 QVLGLGVNGKVLECFHR-RTGQKCALKLLYDS----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECME  109 (336)
T ss_dssp             EEEEEETTEEEEEEEET-TTCCEEEEEEEESS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCT
T ss_pred             eeeeeCCCeEEEEEEEC-CCCCEEEEEEecCc----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccC
Confidence            46999999999999754 45679999998653    1222223334566799999999999865    445899999999


Q ss_pred             CCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC---CCCeEEeecCCCccccCCCC
Q 003836          583 NGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD---HYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       583 ~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~---~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      +|+|.+++...  ..+++..+..++.||+.||.|||++   +|+||||||+|||++.   ++.+||+|||+++.....  
T Consensus       110 gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~--  184 (336)
T 3fhr_A          110 GGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN--  184 (336)
T ss_dssp             TEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-----
T ss_pred             CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccceecccc--
Confidence            99999999765  3689999999999999999999999   9999999999999986   455999999999865422  


Q ss_pred             CccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhc--h
Q 003836          658 HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEN--D  735 (792)
Q Consensus       658 ~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  735 (792)
                       ......+|+.|+|||.+.+..++.++||||||+++|||++|+.||............            ...+...  .
T Consensus       185 -~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~------------~~~~~~~~~~  251 (336)
T 3fhr_A          185 -ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGM------------KRRIRLGQYG  251 (336)
T ss_dssp             --------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------------------C
T ss_pred             -ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhH------------HHhhhccccc
Confidence             223446899999999998889999999999999999999999999654322110000            0000000  0


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .........+..+.+++.+||+.||++|||++|+++.
T Consensus       252 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  288 (336)
T 3fhr_A          252 FPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH  288 (336)
T ss_dssp             CCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             cCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            0111112345678899999999999999999999984

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=1.3e-35  Score=320.00  Aligned_cols=249  Identities=26%  Similarity=0.365  Sum_probs=174.0

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccccc-cchHHHHHHHH-HhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ-DSEKEFKAEVN-GIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~-~~~~~~~~Ei~-~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.||+|+||.||++... .+++.||||++..... ....++..|+. +++.++||||+++++++.+.+..++||||++
T Consensus        26 ~~~~lg~G~~g~Vy~~~~~-~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~  104 (327)
T 3aln_A           26 DLGEIGRGAYGSVNKMVHK-PSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMS  104 (327)
T ss_dssp             C-CEEEECSSEEEEEEEET-TTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCS
T ss_pred             ehheeccCCCEEEEEEEEc-CCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecC
Confidence            3567999999999999754 4578999999976432 33445666665 7778899999999999999999999999998


Q ss_pred             CCCccccccC-----CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC
Q 003836          583 NGTVASFLFG-----DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       583 ~gsL~~~l~~-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      + +|.+++..     ...+++..+..++.|++.||.|||+.  .+|+||||||+|||++.++.+||+|||+++...... 
T Consensus       105 ~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-  180 (327)
T 3aln_A          105 T-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI-  180 (327)
T ss_dssp             E-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCSSSCC------
T ss_pred             C-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCCCceeccccc-
Confidence            5 78777753     46789999999999999999999995  389999999999999999999999999998764322 


Q ss_pred             CccccccccCCccccccc----ccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhh
Q 003836          658 HTNTAIRGTKGYVAPEWF----RNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVE  733 (792)
Q Consensus       658 ~~~~~~~gt~~y~aPE~~----~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  733 (792)
                       ......||+.|+|||.+    .+..++.++||||||+++|||++|+.||.......+..       .......     .
T Consensus       181 -~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-------~~~~~~~-----~  247 (327)
T 3aln_A          181 -AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQL-------TQVVKGD-----P  247 (327)
T ss_dssp             --------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------------CCCCCSC-----C
T ss_pred             -ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHH-------HHHhcCC-----C
Confidence             22234689999999998    45678999999999999999999999996532110000       0000000     0


Q ss_pred             chhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          734 NDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       734 ~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      +.+........+..+.+++.+||+.||++|||++|+++
T Consensus       248 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          248 PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence            01111111234567889999999999999999999875

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=4.9e-35  Score=326.85  Aligned_cols=243  Identities=24%  Similarity=0.306  Sum_probs=180.9

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEEEeccC
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      ..+.||+|+||+|+....  .+++.||||++.....   ..+.+|+++++++ +||||+++++++.+....++||||++ 
T Consensus        28 ~~~~LG~G~~G~V~~~~~--~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-  101 (432)
T 3p23_A           28 PKDVLGHGAEGTIVYRGM--FDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-  101 (432)
T ss_dssp             EEEEEEECGGGCEEEEEE--SSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred             cCCeeecCcCEEEEEEEE--eCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-
Confidence            346899999999654322  2457899999865322   2467899999998 79999999999999999999999997 


Q ss_pred             CCccccccCCC-CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC-----CCCeEEeecCCCccccCCCC
Q 003836          584 GTVASFLFGDS-KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD-----HYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       584 gsL~~~l~~~~-~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~-----~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      |+|.+++.... ...+..+..++.||+.||+|||+.   +|+||||||+|||++.     ...+||+|||+++.......
T Consensus       102 g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~  178 (432)
T 3p23_A          102 ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH  178 (432)
T ss_dssp             EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----
T ss_pred             CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc
Confidence            59999997653 456667789999999999999999   9999999999999953     34688999999987654322


Q ss_pred             --CccccccccCCcccccccc---cCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHh
Q 003836          658 --HTNTAIRGTKGYVAPEWFR---NMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEAL  731 (792)
Q Consensus       658 --~~~~~~~gt~~y~aPE~~~---~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  731 (792)
                        .......||+.|+|||++.   ...++.++|||||||++|||++ |+.||..........        ........  
T Consensus       179 ~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~--------~~~~~~~~--  248 (432)
T 3p23_A          179 SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANI--------LLGACSLD--  248 (432)
T ss_dssp             -------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHH--------HTTCCCCT--
T ss_pred             ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHH--------HhccCCcc--
Confidence              2233467999999999997   4567889999999999999999 888885432211100        00000000  


Q ss_pred             hhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          732 VENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       732 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                           ...........+.+++.+||+.||++|||++||++
T Consensus       249 -----~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          249 -----CLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             -----TSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             -----ccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence                 00112234566789999999999999999999995

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=3.4e-35  Score=338.43  Aligned_cols=262  Identities=24%  Similarity=0.269  Sum_probs=196.7

Q ss_pred             HhhhhhhcCccccceEEEeeecCCCceEEEEEEcccc-cccchHHHHHHHHHhcccCCCCcccccceecc------CCce
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDE------GQNR  574 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~------~~~~  574 (792)
                      .+.+.+.||+|+||+||++... .+++.||||++... .....+.+.+|++++++++||||+++++++..      .+..
T Consensus        15 rY~i~~~LG~G~fG~Vyla~~~-~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~   93 (676)
T 3qa8_A           15 PWEMKERLGTGGFGYVLRWIHQ-DTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP   93 (676)
T ss_dssp             --CCCCCCCBCSSSBCCCCCCT-TTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred             CeEEEEEEeeCCCeEEEEEEEC-CCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence            3556789999999999999654 45678999998754 23345679999999999999999999998865      6778


Q ss_pred             EEEEEeccCCCccccccCCC---CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCC---eEEeecCC
Q 003836          575 LLVYEFMSNGTVASFLFGDS---KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYN---ARISDFGL  648 (792)
Q Consensus       575 ~lV~E~~~~gsL~~~l~~~~---~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~---~kl~Dfg~  648 (792)
                      ++||||+++|+|.+++....   .+++..+..|+.||+.||+|||+.   +|+||||||+|||++.++.   +||+|||+
T Consensus        94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG~  170 (676)
T 3qa8_A           94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGY  170 (676)
T ss_dssp             CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred             EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEccccc
Confidence            99999999999999997643   689999999999999999999998   9999999999999997765   99999999


Q ss_pred             CccccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhh--hhHHHHHHHhhccc
Q 003836          649 AKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDK--AILTDWAYDRYQER  726 (792)
Q Consensus       649 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~--~~~~~~~~~~~~~~  726 (792)
                      ++......  ......||+.|+|||.+.+..++.++||||||+++|||++|+.||.........  ..............
T Consensus       171 a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~  248 (676)
T 3qa8_A          171 AKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYD  248 (676)
T ss_dssp             CCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCC
T ss_pred             cccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhh
Confidence            98764332  223456899999999999999999999999999999999999999754221110  00000000000000


Q ss_pred             chhHhh--hch--hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhH
Q 003836          727 TLEALV--END--LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKV  769 (792)
Q Consensus       727 ~~~~~~--~~~--~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~ev  769 (792)
                      ......  ...  .........+..+.+++..||+.||++|||++|+
T Consensus       249 ~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el  295 (676)
T 3qa8_A          249 DLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN  295 (676)
T ss_dssp             CCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred             hhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence            000000  000  0111234467889999999999999999999873

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.1e-34  Score=343.28  Aligned_cols=238  Identities=21%  Similarity=0.280  Sum_probs=190.2

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCc-----eEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQN-----RLL  576 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~-----~~l  576 (792)
                      +.+.+.||+|+||.||++.....+++.||||++.... ......+.+|++++++++||||+++++++.+.+.     .+|
T Consensus        82 y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~l  161 (681)
T 2pzi_A           82 YEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYI  161 (681)
T ss_dssp             EEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred             eEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEE
Confidence            4456789999999999998765457899999986532 3345678999999999999999999999987665     799


Q ss_pred             EEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC
Q 003836          577 VYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~  656 (792)
                      ||||+++++|.+++..  .+++..+..|+.||+.||.|||++   +|+||||||+|||++.+ .+||+|||+++..... 
T Consensus       162 v~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~-  234 (681)
T 2pzi_A          162 VMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF-  234 (681)
T ss_dssp             EEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEETTCC-
T ss_pred             EEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchhcccC-
Confidence            9999999999998755  789999999999999999999998   99999999999999986 9999999999876432 


Q ss_pred             CCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          657 SHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       657 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                          ....||+.|+|||.+.+.. +.++|||||||++|||++|..|+........                 .       
T Consensus       235 ----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~-----------------~-------  285 (681)
T 2pzi_A          235 ----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGL-----------------P-------  285 (681)
T ss_dssp             ----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSC-----------------C-------
T ss_pred             ----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccc-----------------c-------
Confidence                3456999999999987654 8999999999999999999888754321100                 0       


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCCCCC-HHhHHHHhccC
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPT-MRKVTQMLEGV  776 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs-~~evl~~L~~~  776 (792)
                      ...........+.+++.+||+.||++||+ ++++.+.|.++
T Consensus       286 ~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  326 (681)
T 2pzi_A          286 EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV  326 (681)
T ss_dssp             TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence            00001123356889999999999999995 66666666543

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=1.2e-34  Score=310.94  Aligned_cols=245  Identities=22%  Similarity=0.348  Sum_probs=173.3

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccccc-c-hHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD-S-EKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~-~-~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.||+|+||.||++... .+++.||||++...... . .+.+.++..+++.++||||+++++++.+.+..++||||+ 
T Consensus        29 ~~~~lg~G~~g~V~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-  106 (318)
T 2dyl_A           29 NLGEMGSGTCGQVWKMRFR-KTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-  106 (318)
T ss_dssp             EEEEC------CEEEEEET-TTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-
T ss_pred             ccceeeecCCeeEEEEEEe-cCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-
Confidence            4568999999999999764 45679999999754322 2 233445556788889999999999999999999999999 


Q ss_pred             CCCccccccC-CCCCchhHHHHHHHHHHHHHHHHhh-ccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          583 NGTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHE-ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       583 ~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      ++.+..+... ...+++..+..++.||++||.|||+ .   +|+|+||||+|||++.++.+||+|||+++......  ..
T Consensus       107 ~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~--~~  181 (318)
T 2dyl_A          107 GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK--AK  181 (318)
T ss_dssp             SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC-----------
T ss_pred             CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc--cc
Confidence            4444444433 3578999999999999999999998 5   89999999999999999999999999997654322  22


Q ss_pred             ccccccCCcccccccc-----cCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          661 TAIRGTKGYVAPEWFR-----NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~-----~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                      ....+++.|+|||.+.     ...++.++||||||+++|||++|+.||........  .+..             +....
T Consensus       182 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~-------------~~~~~  246 (318)
T 2dyl_A          182 DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFE--VLTK-------------VLQEE  246 (318)
T ss_dssp             -----CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHH--HHHH-------------HHHSC
T ss_pred             cccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHH--HHHH-------------HhccC
Confidence            3346899999999984     45788999999999999999999999975322111  0000             00000


Q ss_pred             -hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          736 -LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       736 -~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                       .........+.++.+++.+||+.||.+||+++|+++
T Consensus       247 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          247 PPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             CCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             CCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence             000011123467889999999999999999999986

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=5.2e-34  Score=301.11  Aligned_cols=228  Identities=11%  Similarity=0.054  Sum_probs=180.0

Q ss_pred             HhhhhhhcCccccceEEEeeecCCCceEEEEEEccccccc---chHHHHHHHHHhcccCCCCcccccceeccCCceEEEE
Q 003836          502 TRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD---SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       502 ~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~---~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~  578 (792)
                      .+.+.+.||+|+||.||+|... .+++.||||++......   ..+.+.+|+..+.+++||||+++++++.+.+..++||
T Consensus        32 ~y~i~~~lg~G~~g~Vy~a~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  110 (286)
T 3uqc_A           32 RYRLLIFHGGVPPLQFWQALDT-ALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA  110 (286)
T ss_dssp             TEEEEEEEEBSTTCEEEEEEET-TTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cEEEEEEEcccCCeEEEEEEec-CCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence            3455678999999999999754 45689999999764332   2467999999999999999999999999999999999


Q ss_pred             EeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          579 EFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       579 E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      ||+++++|.+++...  .......+|+.||+.||+|||++   +|+||||||+|||++.++.+||++++           
T Consensus       111 e~~~g~~L~~~l~~~--~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~-----------  174 (286)
T 3uqc_A          111 EWIRGGSLQEVADTS--PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA-----------  174 (286)
T ss_dssp             ECCCEEEHHHHHTTC--CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC-----------
T ss_pred             EecCCCCHHHHHhcC--CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc-----------
Confidence            999999999999543  34557889999999999999999   99999999999999999999998443           


Q ss_pred             ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh--
Q 003836          659 TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL--  736 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  736 (792)
                                |++|       ++.++||||||+++|||++|+.||............             ...+....  
T Consensus       175 ----------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~-------------~~~~~~~~~~  224 (286)
T 3uqc_A          175 ----------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA-------------ERDTAGQPIE  224 (286)
T ss_dssp             ----------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC-------------CBCTTSCBCC
T ss_pred             ----------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH-------------HHHhccCCCC
Confidence                      4433       689999999999999999999999764322100000             00000000  


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      ........+..+.+++.+||+.||++| |+.|+++.|+.+.
T Consensus       225 ~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~  264 (286)
T 3uqc_A          225 PADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQAT  264 (286)
T ss_dssp             HHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHH
T ss_pred             hhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHh
Confidence            000112234678899999999999999 9999999998754

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=4.1e-34  Score=309.46  Aligned_cols=243  Identities=15%  Similarity=0.103  Sum_probs=182.7

Q ss_pred             HHHhhhhhhcCccccceEEEeeecCCCceEEEEEEccccc--------ccchHHHHHHHHHhcccC--------------
Q 003836          500 EVTRGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--------QDSEKEFKAEVNGIGQTH--------------  557 (792)
Q Consensus       500 ~~~~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--------~~~~~~~~~Ei~~l~~l~--------------  557 (792)
                      ...+.+.+.||+|+||+||+|..   +++.||||++....        ....+.+.+|+.++++++              
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv   95 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA---DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFI   95 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE---TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBC
T ss_pred             cccchheeeecccCceEEEEEEe---CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchh
Confidence            34456678999999999999975   45899999997542        223478899999988886              


Q ss_pred             ------------CCCcccccceecc-------------CCceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHH
Q 003836          558 ------------HKNLVRLLGYCDE-------------GQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGL  612 (792)
Q Consensus       558 ------------h~niv~l~g~~~~-------------~~~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL  612 (792)
                                  ||||+++++++.+             ....+|||||+++|++.+.+.+ ..+++..+..|+.||+.||
T Consensus        96 ~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi~~aL  174 (336)
T 2vuw_A           96 GLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSILHQLTASL  174 (336)
T ss_dssp             CEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHHHHHHHHH
T ss_pred             hhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHHHHHHHHH
Confidence                        5666666666654             7889999999999987777744 5679999999999999999


Q ss_pred             HHHh-hccCCCeEecCCCCCcEEEcCCC--------------------CeEEeecCCCccccCCCCCccccccccCCccc
Q 003836          613 FYLH-EECCTQIIHCDIKPQNILLDDHY--------------------NARISDFGLAKLLTLDQSHTNTAIRGTKGYVA  671 (792)
Q Consensus       613 ~yLH-~~~~~~ivH~dikp~NILl~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~a  671 (792)
                      +||| +.   +|+||||||+|||++.++                    .+||+|||+++.....      ...||+.|+|
T Consensus       175 ~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y~a  245 (336)
T 2vuw_A          175 AVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSMD  245 (336)
T ss_dssp             HHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCTTC
T ss_pred             HHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeecccC
Confidence            9999 88   999999999999999887                    8999999999876432      3469999999


Q ss_pred             ccccccCCCCcccceehHHHH-HHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHH
Q 003836          672 PEWFRNMPITVKVDVYSYGVL-LLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVM  750 (792)
Q Consensus       672 PE~~~~~~~~~k~DV~S~Gv~-l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  750 (792)
                      ||++.+.. +.++|||||+++ .+++++|..||......   ..+.........       .............+.++.+
T Consensus       246 PE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~---~~~~~~~~~~~~-------~~~~~~~~~~~~~s~~~~d  314 (336)
T 2vuw_A          246 EDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWL---HYLTDKMLKQMT-------FKTKCNTPAMKQIKRKIQE  314 (336)
T ss_dssp             SGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHH---HHHHHHHHHTCC-------CSSCCCSHHHHHHHHHHHH
T ss_pred             hhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhh---hHHHHhhhhhhc-------cCcccchhhhhhcCHHHHH
Confidence            99998766 899999998777 77788898887431100   000000000000       0000011122357788999


Q ss_pred             HHHHccccCCCCCCCHHhHH-H
Q 003836          751 VAFWCIQEDPSHRPTMRKVT-Q  771 (792)
Q Consensus       751 l~~~Cl~~~p~~RPs~~evl-~  771 (792)
                      |+.+||+.|     |++|++ +
T Consensus       315 li~~~L~~d-----sa~e~l~~  331 (336)
T 2vuw_A          315 FHRTMLNFS-----SATDLLCQ  331 (336)
T ss_dssp             HHHHGGGSS-----SHHHHHHH
T ss_pred             HHHHHhccC-----CHHHHHhc
Confidence            999999966     999998 6

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=2.6e-33  Score=297.97  Aligned_cols=228  Identities=21%  Similarity=0.288  Sum_probs=177.2

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHh-cccCCCCcccccceecc----CCceEEEEEec
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGI-GQTHHKNLVRLLGYCDE----GQNRLLVYEFM  581 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l-~~l~h~niv~l~g~~~~----~~~~~lV~E~~  581 (792)
                      +.||+|+||.||++... .+++.||+|++..     ...+.+|+.++ +.++||||+++++++..    ....++||||+
T Consensus        24 ~~lg~G~~g~V~~~~~~-~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~   97 (299)
T 3m2w_A           24 QVLGLGINGKVLQIFNK-RTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL   97 (299)
T ss_dssp             EEEEEETTEEEEEEEET-TTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCC
T ss_pred             cccccCCCeEEEEEEEc-CCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeec
Confidence            56999999999999754 4567999999864     35678888888 55699999999999876    67789999999


Q ss_pred             cCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC---CCCeEEeecCCCccccCCC
Q 003836          582 SNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD---HYNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       582 ~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~---~~~~kl~Dfg~a~~~~~~~  656 (792)
                      ++|+|.+++...  ..+++..+..++.||+.||+|||+.   +|+||||||+|||++.   ++.+||+|||+++...   
T Consensus        98 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~---  171 (299)
T 3m2w_A           98 DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT---  171 (299)
T ss_dssp             CSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT---
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccccccccc---
Confidence            999999999765  3689999999999999999999998   9999999999999998   7899999999987532   


Q ss_pred             CCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          657 SHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       657 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                                          +..++.++|||||||++|||++|+.||.........            ......+.... 
T Consensus       172 --------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~------------~~~~~~~~~~~-  218 (299)
T 3m2w_A          172 --------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS------------PGMKTRIRMGQ-  218 (299)
T ss_dssp             --------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------------------CCSCCSSCTTC-
T ss_pred             --------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh------------HHHHHHHhhcc-
Confidence                                235688999999999999999999999654321100            00000000000 


Q ss_pred             cccCC----HHHHHHHHHHHHHccccCCCCCCCHHhHHHH--hccCcCCC
Q 003836          737 EAMNN----VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM--LEGVVEVP  780 (792)
Q Consensus       737 ~~~~~----~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~--L~~~~~~~  780 (792)
                       ...+    ...+.++.+++.+||+.||++|||++|+++.  +......+
T Consensus       219 -~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~~~~  267 (299)
T 3m2w_A          219 -YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP  267 (299)
T ss_dssp             -CSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGGGSC
T ss_pred             -ccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccccCC
Confidence             0011    1235678899999999999999999999974  44433333

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=2.7e-33  Score=311.57  Aligned_cols=233  Identities=15%  Similarity=0.124  Sum_probs=174.7

Q ss_pred             hhhcCccccceEEEeeecCCCceEEEEEEcccccc---cchHHHHHHHHHhcccCC-CCcccccce--------------
Q 003836          506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ---DSEKEFKAEVNGIGQTHH-KNLVRLLGY--------------  567 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~h-~niv~l~g~--------------  567 (792)
                      .+.||+|+||+||+|... .+++.||||++.....   ...+.+.+|+.+++.++| +|...+..+              
T Consensus        83 ~~~LG~G~fG~Vy~a~~~-~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (413)
T 3dzo_A           83 GTVLGQEDPYAYLEATDQ-ETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQ  161 (413)
T ss_dssp             EEEEEEETTEEEEEEEET-TTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC
T ss_pred             ecccccCCCEEEEEEEec-CCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCC
Confidence            367999999999999754 4567999999874322   236789999999999987 432222211              


Q ss_pred             -------ecc-----CCceEEEEEeccCCCcccccc------C-CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCC
Q 003836          568 -------CDE-----GQNRLLVYEFMSNGTVASFLF------G-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDI  628 (792)
Q Consensus       568 -------~~~-----~~~~~lV~E~~~~gsL~~~l~------~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~di  628 (792)
                             +..     ....+++|+++ +++|.+++.      . ...+++..++.|+.||++||+|||++   +|+||||
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iiHrDi  237 (413)
T 3dzo_A          162 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYL  237 (413)
T ss_dssp             ---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred             CCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCc
Confidence                   111     12356666655 679998884      1 23578889999999999999999998   9999999


Q ss_pred             CCCcEEEcCCCCeEEeecCCCccccCCCCCccccccccCCccccccc----------ccCCCCcccceehHHHHHHHHHh
Q 003836          629 KPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF----------RNMPITVKVDVYSYGVLLLEIIC  698 (792)
Q Consensus       629 kp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~k~DV~S~Gv~l~el~t  698 (792)
                      ||+||||+.++.+||+|||+++.....    .....| +.|+|||++          ....++.++|||||||++|||++
T Consensus       238 Kp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ellt  312 (413)
T 3dzo_A          238 RPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWC  312 (413)
T ss_dssp             CGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHH
T ss_pred             ccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHH
Confidence            999999999999999999999865432    334567 999999999          55668899999999999999999


Q ss_pred             cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHH
Q 003836          699 LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVT  770 (792)
Q Consensus       699 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl  770 (792)
                      |+.||........                ...++...      ...++.+.+++.+||+.||++||++.|++
T Consensus       313 g~~Pf~~~~~~~~----------------~~~~~~~~------~~~~~~~~~li~~~l~~dP~~Rpt~~~~l  362 (413)
T 3dzo_A          313 ADLPNTDDAALGG----------------SEWIFRSC------KNIPQPVRALLEGFLRYPKEDRLLPLQAM  362 (413)
T ss_dssp             SSCCCCTTGGGSC----------------SGGGGSSC------CCCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred             CCCCCCCcchhhh----------------HHHHHhhc------ccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence            9999975432111                11111100      12236788999999999999999976664

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.94  E-value=1.5e-28  Score=282.93  Aligned_cols=185  Identities=18%  Similarity=0.101  Sum_probs=130.5

Q ss_pred             hcCccccceEEEeeecCCCceEEEEEEccccc----------ccchHHHHHHHHHhccc-CCCCcccccceeccCCceEE
Q 003836          508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF----------QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLL  576 (792)
Q Consensus       508 ~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~----------~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~l  576 (792)
                      .++.|++|.+..+. ....++.+++|.+.+..          ....++|.+|+++|+++ +|+||++++++++++...||
T Consensus       241 ~~~~~~~~~h~~~r-r~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL  319 (569)
T 4azs_A          241 QPYAGAGLAHKRSR-RYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL  319 (569)
T ss_dssp             C-C--------CCE-EEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred             ccccCCcccccccc-cccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence            35566666554432 22235679999986531          22345799999999999 79999999999999999999


Q ss_pred             EEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCC
Q 003836          577 VYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~  656 (792)
                      ||||++|++|.++|.....++..   +|+.||+.||+|||++   +||||||||+||||++++.+||+|||+|+....+.
T Consensus       320 VMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~  393 (569)
T 4azs_A          320 VMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC  393 (569)
T ss_dssp             EEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred             EEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence            99999999999999888777654   5899999999999999   99999999999999999999999999998765433


Q ss_pred             CCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCc
Q 003836          657 SHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRR  701 (792)
Q Consensus       657 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~  701 (792)
                      . .....+||++|||||++.+ .+..++|+||+|++++++.++..
T Consensus       394 ~-~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~  436 (569)
T 4azs_A          394 S-WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWS  436 (569)
T ss_dssp             C-CSHHHHHHHHHHHHHHC------------------CCCCTTHH
T ss_pred             c-cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccc
Confidence            2 2345679999999999875 46788999999999988866544

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.91  E-value=3.3e-25  Score=253.63  Aligned_cols=182  Identities=17%  Similarity=0.187  Sum_probs=145.9

Q ss_pred             hhhcCccccceEEEeeecCCCceEEEEEEcccccc--------cchHHHHHHHHHhcccCCCCcccccceeccCCceEEE
Q 003836          506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ--------DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLV  577 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~--------~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV  577 (792)
                      .+.||+|+||.||++...   ++.+++|+......        ...+.+.+|++++++++||||+++..++...+..+||
T Consensus       341 ~~~LG~G~fg~Vy~~~~~---~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV  417 (540)
T 3en9_A          341 EHLIGKGAEADIKRDSYL---DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM  417 (540)
T ss_dssp             -------CCEEEEEEECS---SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred             CCEEeeCCCEEEEEEEEC---CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence            368999999999999543   46788887643211        1134589999999999999999777777788888999


Q ss_pred             EEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC
Q 003836          578 YEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      |||+++++|.+++..        +..++.||++||.|||++   +|+||||||+|||+++  .+||+|||+++.......
T Consensus       418 mE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~  484 (540)
T 3en9_A          418 MSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDED  484 (540)
T ss_dssp             EECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCCHHH
T ss_pred             EECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCCccc
Confidence            999999999999965        668999999999999998   9999999999999999  999999999998754322


Q ss_pred             Cc------cccccccCCccccccccc--CCCCcccceehHHHHHHHHHhcCcCC
Q 003836          658 HT------NTAIRGTKGYVAPEWFRN--MPITVKVDVYSYGVLLLEIICLRRNI  703 (792)
Q Consensus       658 ~~------~~~~~gt~~y~aPE~~~~--~~~~~k~DV~S~Gv~l~el~tg~~p~  703 (792)
                      ..      .....||+.|||||++..  ..|+.+.|+||..+-.++-+.++.++
T Consensus       485 ~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          485 KAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             cccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            11      235679999999999987  66888999999999998888777655

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.84  E-value=9.2e-22  Score=206.32  Aligned_cols=140  Identities=13%  Similarity=0.101  Sum_probs=115.0

Q ss_pred             hhhcCccccceEEEeeecCCCceEEEEEEcccccc------------------cchHHHHHHHHHhcccCCCCcccccce
Q 003836          506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ------------------DSEKEFKAEVNGIGQTHHKNLVRLLGY  567 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~Ei~~l~~l~h~niv~l~g~  567 (792)
                      .+.||+|+||.||+|..  .+++.||+|+++....                  .....+.+|+.++++++  | +++.++
T Consensus        95 ~~~iG~G~~g~Vy~~~~--~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~  169 (282)
T 1zar_A           95 GKLMGEGKESAVFNCYS--EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKV  169 (282)
T ss_dssp             EEEEEECSSEEEEEEEE--TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCE
T ss_pred             cCEeccCCCceEEEEEe--CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeE
Confidence            37899999999999986  4578999999864321                  13457899999999999  5 777776


Q ss_pred             eccCCceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecC
Q 003836          568 CDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFG  647 (792)
Q Consensus       568 ~~~~~~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg  647 (792)
                      +.. +..++||||+++++|.+ +..      .....++.||+.||.|||+.   +|+||||||+|||++ ++.+||+|||
T Consensus       170 ~~~-~~~~lvmE~~~g~~L~~-l~~------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~vkl~DFG  237 (282)
T 1zar_A          170 YAW-EGNAVLMELIDAKELYR-VRV------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGIWIIDFP  237 (282)
T ss_dssp             EEE-ETTEEEEECCCCEEGGG-CCC------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEEEECCCT
T ss_pred             Eec-cceEEEEEecCCCcHHH-cch------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcEEEEECC
Confidence            543 56699999999999999 522      34557999999999999998   999999999999999 9999999999


Q ss_pred             CCccccCCCCCccccccccCCcccccccc
Q 003836          648 LAKLLTLDQSHTNTAIRGTKGYVAPEWFR  676 (792)
Q Consensus       648 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~  676 (792)
                      +++.              +..++|||++.
T Consensus       238 ~a~~--------------~~~~~a~e~l~  252 (282)
T 1zar_A          238 QSVE--------------VGEEGWREILE  252 (282)
T ss_dssp             TCEE--------------TTSTTHHHHHH
T ss_pred             CCeE--------------CCCCCHHHHHH
Confidence            9974              34578999875

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1

Probab=99.83  E-value=1.7e-20  Score=167.95  Aligned_cols=107  Identities=18%  Similarity=0.246  Sum_probs=91.6

Q ss_pred             cccCcccCCcceeecCCCCcee--cCCCeEEEeeeecCCCCceEEEEEeecCCCCcEEEEecCCCCCCCCeeEEEEeCcc
Q 003836           21 QSNGTISIGQQLTAAESTEPWL--SPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAVNPAPRGSKLRLTANRG   98 (792)
Q Consensus        21 ~~~~~i~~g~~l~~~~~~~~lv--S~~g~F~lGF~~~~~~~~~~~gIW~~~~~~~tvvWvANr~~P~~~~~~l~~~~~G~   98 (792)
                      ++.++|.+|++|.+++   +|+  |++|.|+|+|+.+++   .   +||++   +++||+||++.| ..++.+.|.+|||
T Consensus         6 ~~~~~l~~g~~L~~g~---~l~~~S~~g~~~L~~~~dgn---l---vly~~---~~~vW~sn~~~~-~~~~~l~l~~dGN   72 (119)
T 1b2p_A            6 SKQPDDNHPQILHATE---SLEILFGTHVYRFIMQTDCN---L---VLYDN---NNPIWATNTGGL-GNGCRAVLQPDGV   72 (119)
T ss_dssp             CSCSSSCCCCEEETTC---EEEEEETTEEEEEEECTTSC---E---EEEET---TEEEEECCCTTS-CSSCEEEECTTSC
T ss_pred             ecCcccCCCCEEcCCC---EEEEeCCCCCEEEEEecCCC---E---EEEEC---CEEEEeCCCccC-CCceEEEEccCCE
Confidence            3568999999998664   899  999999999998764   2   68875   799999999977 3457899999999


Q ss_pred             EEEEcCCCCEEEEeccCCC-cceeEEEecCCcEEEEecCCcccccc
Q 003836           99 LVLEDPEGREIWKSEISTG-QAAFGVLYDTGNFLIVNTNSERLWQS  143 (792)
Q Consensus        99 Lvl~~~~~~~vWst~~~~~-~~~~a~LldsGNlVl~~~~~~~lWQS  143 (792)
                      |||+|.++.++|+|++... +..+++|+|+|||||++   .++|||
T Consensus        73 LVl~d~~~~~lW~S~~~~~~g~~~l~l~~~Gnlvl~~---~~~W~S  115 (119)
T 1b2p_A           73 LVVITNENVTVWQSPVAGKAGHYVLVLQPDRNVVIYG---DALWAT  115 (119)
T ss_dssp             EEEECTTCCEEEECSCCCCSSCEEEEECTTSCEEEEE---SEEEEC
T ss_pred             EEEEeCCCcEEEcCCCCCCCCCEEEEEECCCcEEEEC---ccEeCC
Confidence            9999999999999997643 45689999999999998   389998

>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*

Probab=99.83  E-value=2.7e-20  Score=162.75  Aligned_cols=104  Identities=18%  Similarity=0.354  Sum_probs=88.0

Q ss_pred             cCcccCCcceeecCCCCceecCCCeEEEeeeecCCCCceEEEEEeecCCCCcEEEEecCCCCCCCCeeEEEEeCccEEEE
Q 003836           23 NGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAVNPAPRGSKLRLTANRGLVLE  102 (792)
Q Consensus        23 ~~~i~~g~~l~~~~~~~~lvS~~g~F~lGF~~~~~~~~~~~gIW~~~~~~~tvvWvANr~~P~~~~~~l~~~~~G~Lvl~  102 (792)
                      .|+|.+||.|.+++   .|+|  |.|.|.|...++     |.++.    ..++||+|||+.|..+.+.|.|+.||||||+
T Consensus         1 kn~L~~g~~L~~g~---~L~s--g~y~l~~q~DgN-----Lvly~----~~~~vW~ant~~~~~~~~~L~l~~dGnLvL~   66 (105)
T 4h3o_A            1 RNILDNNEGLYAGQ---SLDV--EPYHFIMQDDCN-----LVLYD----HSTSTWASNTEIGGKSGCSAVLQSDGNFVVY   66 (105)
T ss_dssp             CCEECTTEEECTTC---EEEE--TTEEEEECTTSC-----EEEEE----TTEEEEECCCCCTTCCSCEEEECTTSCEEEE
T ss_pred             CCCcCCCCEEcCCC---EEEE--CCEEEEECCCCe-----EEEEE----CCEEEEEecCCCCCCccEEEEEeCCccEEEE
Confidence            37899999998654   7877  889999987764     34543    3689999999999988889999999999999


Q ss_pred             cCCCCEEEEeccCCC-cceeEEEecCCcEEEEecCCcccccc
Q 003836          103 DPEGREIWKSEISTG-QAAFGVLYDTGNFLIVNTNSERLWQS  143 (792)
Q Consensus       103 ~~~~~~vWst~~~~~-~~~~a~LldsGNlVl~~~~~~~lWQS  143 (792)
                      |+++++||+|+++.. +..+|+|+|+|||||++.   .||||
T Consensus        67 d~~~~~vWss~t~~~~~~~~l~L~ddGNlVly~~---~~W~S  105 (105)
T 4h3o_A           67 DSSGRSLWASHSTRGSGNYILILQDDGNVIIYGS---DIWST  105 (105)
T ss_dssp             CTTCCEEEECCCCCCSSCEEEEECTTSCEEEEES---EEEEC
T ss_pred             CCCcEEEEEecCCCCCCCEEEEEeCCCeEEEECC---cEecC
Confidence            999999999998644 456899999999999964   69998

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*

Probab=99.82  E-value=3.2e-20  Score=164.17  Aligned_cols=109  Identities=21%  Similarity=0.300  Sum_probs=92.1

Q ss_pred             cCcccCCcceeecCCCCceecCCCeEEEeeeecCCCCceEEEEEeecCCCCcEEEEecCCCCCCCCeeEEEEeCccEEEE
Q 003836           23 NGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAVNPAPRGSKLRLTANRGLVLE  102 (792)
Q Consensus        23 ~~~i~~g~~l~~~~~~~~lvS~~g~F~lGF~~~~~~~~~~~gIW~~~~~~~tvvWvANr~~P~~~~~~l~~~~~G~Lvl~  102 (792)
                      +|+|.+||.|..++   +|+ ++|.|+|+|+..++.      |||+   .+++||+||++.|. .++.+.|.+||||||.
T Consensus         1 ~d~l~~g~~L~~g~---~l~-~~~~~~l~~~~dGnl------vl~~---~~~~vW~sn~~~~~-~~~~l~l~~dGNLVl~   66 (110)
T 3a0c_A            1 VNSLSSPNSLFTGH---SLE-VGPSYRLIMQGDCNF------VLYD---SGKPVWASNTGGLG-SGCRLTLHNNGNLVIY   66 (110)
T ss_dssp             CCEEETTCEECTTC---EEE-ETTTEEEEECTTSCE------EEEE---TTEEEEECCCTTSC-SSCEEEECTTSCEEEE
T ss_pred             CCEeCCCCEECCCC---EEE-ECCCEEEEEcCCCcE------EEEE---CCEEEEECCCCCCC-CcEEEEEeCCCCEEEE
Confidence            37899999998654   789 999999999877642      6786   37999999998774 4578999999999999


Q ss_pred             cCCCCEEEEeccCCC-cceeEEEecCCcEEEEecCCccccccccCCc
Q 003836          103 DPEGREIWKSEISTG-QAAFGVLYDTGNFLIVNTNSERLWQSFDHPT  148 (792)
Q Consensus       103 ~~~~~~vWst~~~~~-~~~~a~LldsGNlVl~~~~~~~lWQSFd~Pt  148 (792)
                      |.+|.++|+|++... +..+++|+|+|||||++.   .+||||+||.
T Consensus        67 ~~~~~~~W~S~t~~~~g~~~l~l~~dGnlvl~~~---~~W~S~~~~~  110 (110)
T 3a0c_A           67 DQSNRVIWQTKTNGKEDHYVLVLQQDRNVVIYGP---VVWATGSGPA  110 (110)
T ss_dssp             CTTCCEEEECCCCCSSSCCEEEECTTSCEEEECS---EEEECSCCC-
T ss_pred             CCCCcEEEecCCCCCCCCEEEEEeCCccEEEECC---CEecCCCcCC
Confidence            999999999998644 345899999999999975   7999999984

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*

Probab=99.80  E-value=1.1e-19  Score=162.27  Aligned_cols=109  Identities=20%  Similarity=0.341  Sum_probs=91.2

Q ss_pred             cCcccCCcceeecCCCCceecCCCeEEEeeeecCCCCceEEEEEeecCCCCcEEEEecCCCCCCCCeeEEEEeCccEEEE
Q 003836           23 NGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAVNPAPRGSKLRLTANRGLVLE  102 (792)
Q Consensus        23 ~~~i~~g~~l~~~~~~~~lvS~~g~F~lGF~~~~~~~~~~~gIW~~~~~~~tvvWvANr~~P~~~~~~l~~~~~G~Lvl~  102 (792)
                      .|+|.+||+|.+++   +|+  +|.|+|+|+++++   .   ++|+   .+++||+||++.|. .++.|.|.+||||||.
T Consensus         2 ~dtl~~gq~L~~g~---~L~--~g~~~L~~~~dgn---l---vly~---~~~~vW~sn~~~~~-~~~~l~l~~~GnLvl~   66 (115)
T 2dpf_A            2 DNVLLSGQTLHADH---SLQ--AGAYTLTIQNKCN---L---VKYQ---NGRQIWASNTDRRG-SGCRLTLLSDGNLVIY   66 (115)
T ss_dssp             CCEEETTCEEETTE---EEE--ETTEEEEECTTSC---E---EEEE---TTEEEEECSCTTSC-SSCEEEECTTSCEEEE
T ss_pred             CCEeCCCCEECCCC---EEE--CCCEEEEEcCCCc---E---EEEe---CCEEEEeCCCCCCC-CceEEEECCCCcEEEE
Confidence            58999999998654   787  8999999987653   3   2465   37899999999884 4578999999999999


Q ss_pred             cCCCCEEEEeccCCC-cceeEEEecCCcEEEEecCCccccccccCCcc
Q 003836          103 DPEGREIWKSEISTG-QAAFGVLYDTGNFLIVNTNSERLWQSFDHPTD  149 (792)
Q Consensus       103 ~~~~~~vWst~~~~~-~~~~a~LldsGNlVl~~~~~~~lWQSFd~PtD  149 (792)
                      |.++.++|+|++..+ +..+|+|+|+|||||++.   ++||||.+++.
T Consensus        67 d~~~~~vW~S~~~~~~g~~~l~l~~dGnlvl~~~---~~W~S~~~~~~  111 (115)
T 2dpf_A           67 DHNNNDVWGSACWGDNGKYALVLQKDGRFVIYGP---VLWSLGPNGCR  111 (115)
T ss_dssp             CTTCCEEEECCCCCSSSCCEEEECTTSCEEEECS---EEECSSTTCBC
T ss_pred             CCCceEEEEcCCCCCCCCEEEEEeCCCeEEEECC---CEEECCCCCCc
Confidence            998999999998643 456899999999999964   89999998764

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A

Probab=99.78  E-value=6.2e-19  Score=156.74  Aligned_cols=109  Identities=17%  Similarity=0.357  Sum_probs=91.0

Q ss_pred             cCcccCCcceeecCCCCceecCCCeEEEeeeecCCCCceEEEEEeecCCCCcEEEEecCCCCCCCCeeEEEEeCccEEEE
Q 003836           23 NGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAVNPAPRGSKLRLTANRGLVLE  102 (792)
Q Consensus        23 ~~~i~~g~~l~~~~~~~~lvS~~g~F~lGF~~~~~~~~~~~gIW~~~~~~~tvvWvANr~~P~~~~~~l~~~~~G~Lvl~  102 (792)
                      +|||.+||.|++++   +|  ++|.|+|+|+.+++.      +||++   +++||+||++.+ ..++.+.|.++|||||+
T Consensus         1 tdtl~~gq~L~~g~---~L--~~~~~~L~~~~dgnl------vl~~~---~~~vW~sn~~~~-~~~~~l~l~~~GNLvl~   65 (112)
T 1xd5_A            1 SDRLNSGHQLDTGG---SL--AEGGYLFIIQNDCNL------VLYDN---NRAVWASGTNGK-ASGCVLKMQNDGNLVIY   65 (112)
T ss_dssp             CCEEETTEEECTTC---EE--EETTEEEEECTTSCE------EEEET---TEEEEECCCTTS-CSSEEEEECTTSCEEEE
T ss_pred             CCCCCCCCEECCCC---EE--eCCCEEEEEcCCCcE------EEEEC---CEEEEeCCCcCC-CCCEEEEEeCCCCEEEE
Confidence            48999999998654   67  589999999987652      46765   689999999864 24578999999999999


Q ss_pred             cCCCCEEEEeccCCC-cceeEEEecCCcEEEEecCCccccccccCC
Q 003836          103 DPEGREIWKSEISTG-QAAFGVLYDTGNFLIVNTNSERLWQSFDHP  147 (792)
Q Consensus       103 ~~~~~~vWst~~~~~-~~~~a~LldsGNlVl~~~~~~~lWQSFd~P  147 (792)
                      | ++.++|+|++... +..+++|+++|||||++..+.++||||+|.
T Consensus        66 d-~~~~~W~S~~~~~~g~~~l~l~~dGnlvl~~~~~~~~W~S~~~~  110 (112)
T 1xd5_A           66 S-GSRAIWASNTNRQNGNYYLILQRDRNVVIYDNSNNAIWATHTNV  110 (112)
T ss_dssp             E-TTEEEEECCCCCSCCCCEEEECTTSCEEEECTTSCEEEECCCCC
T ss_pred             c-CCEEEEECCccCCCCCEEEEEeCCCcEEEECCCCceEEECCCcc
Confidence            9 8889999987643 346899999999999987788999999985

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*

Probab=99.74  E-value=8.8e-18  Score=148.28  Aligned_cols=103  Identities=18%  Similarity=0.305  Sum_probs=84.8

Q ss_pred             CcccCCcceeecCCCCceecCCCeEEEeeeecCCCCceEEEEEeecCCCCcEEEEecCCCCCCCCeeEEEEeCccEEEEc
Q 003836           24 GTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAVNPAPRGSKLRLTANRGLVLED  103 (792)
Q Consensus        24 ~~i~~g~~l~~~~~~~~lvS~~g~F~lGF~~~~~~~~~~~gIW~~~~~~~tvvWvANr~~P~~~~~~l~~~~~G~Lvl~~  103 (792)
                      +||.+||.|.+++   +|+  +|.|+|+|+.+++   .+   .|..   .++||+||++.+ ..++.|.|..||||||.|
T Consensus         2 ntL~~gq~L~~g~---~L~--~g~~~L~~q~dGn---Lv---ly~~---~~~vW~snt~~~-~~~~~l~l~~dGNLvl~~   66 (109)
T 3dzw_A            2 NILYSGETLSPGE---FLN--NGRYVFIMQEDCN---LV---LYDV---DKPIWATNTGGL-DRRCHLSMQSDGNLVVYS   66 (109)
T ss_dssp             CEEETTEEECTTC---EEE--ETTEEEEECTTSC---EE---EEET---TEEEEECCCTTS-SSSCEEEECTTSCEEEEC
T ss_pred             CCcCCCCEeCCCC---EEE--CCCEEEEEcCCCc---EE---EEeC---CEEEEECCcccC-CCCEEEEEeCCCCEEEEC
Confidence            6899999998654   675  7999999987764   32   2654   589999999876 345789999999999999


Q ss_pred             CCCCEEEEeccCCCc-ceeEEEecCCcEEEEecCCccccccc
Q 003836          104 PEGREIWKSEISTGQ-AAFGVLYDTGNFLIVNTNSERLWQSF  144 (792)
Q Consensus       104 ~~~~~vWst~~~~~~-~~~a~LldsGNlVl~~~~~~~lWQSF  144 (792)
                      .++.++|+|+++..+ ..+|+|+|+|||||+++   .+|||=
T Consensus        67 ~~~~~~W~S~t~~~~~~~~~~L~ddGNlvly~~---~~W~s~  105 (109)
T 3dzw_A           67 PRNNPIWASNTGGENGNYVCVLQKDRNVVIYGT---ARWATG  105 (109)
T ss_dssp             TTSCEEEECCCCCSSSCEEEEECTTSCEEEEES---CCCCCC
T ss_pred             CCCCEEEECCCCCCCCCEEEEEeCCCEEEEECC---CEEeCC
Confidence            999999999986544 46899999999999984   899983

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.71  E-value=1.2e-17  Score=172.72  Aligned_cols=135  Identities=17%  Similarity=0.145  Sum_probs=102.8

Q ss_pred             hhhhcCccccceEEEeeecCCCceE--EEEEEccccccc------------------------chHHHHHHHHHhcccCC
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNH--VAVKKLNSVFQD------------------------SEKEFKAEVNGIGQTHH  558 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~--vavK~~~~~~~~------------------------~~~~~~~Ei~~l~~l~h  558 (792)
                      +.+.||+|+||.||+|... .+++.  ||||+++.....                        ....+.+|+.++.+++|
T Consensus        51 i~~~ig~G~~g~Vy~a~~~-~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~  129 (258)
T 1zth_A           51 MGGVISTGKEANVFYADGV-FDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKE  129 (258)
T ss_dssp             EEEEEEECSSEEEEEEEEE-ETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHH
T ss_pred             hCCEEeecceEEEEEEEEc-CCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHh
Confidence            4467999999999999762 23567  999986542111                        12368899999999998


Q ss_pred             CCc--ccccceeccCCceEEEEEeccC-C----CccccccCCCCCchhHHHHHHHHHHHHHHHHh-hccCCCeEecCCCC
Q 003836          559 KNL--VRLLGYCDEGQNRLLVYEFMSN-G----TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLH-EECCTQIIHCDIKP  630 (792)
Q Consensus       559 ~ni--v~l~g~~~~~~~~~lV~E~~~~-g----sL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~ivH~dikp  630 (792)
                      +++  +.++.+    ...+|||||+.+ |    +|.++...   .++.....++.||+.||.||| +.   +|+||||||
T Consensus       130 ~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~---givHrDlkp  199 (258)
T 1zth_A          130 AGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE---LKELDVEGIFNDVVENVKRLYQEA---ELVHADLSE  199 (258)
T ss_dssp             TTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG---GGGSCHHHHHHHHHHHHHHHHHTS---CEECSSCST
T ss_pred             CCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc---cChHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCH
Confidence            864  333332    356899999952 5    44444321   345678899999999999999 87   999999999


Q ss_pred             CcEEEcCCCCeEEeecCCCccc
Q 003836          631 QNILLDDHYNARISDFGLAKLL  652 (792)
Q Consensus       631 ~NILl~~~~~~kl~Dfg~a~~~  652 (792)
                      +|||+++  .++|+|||+|...
T Consensus       200 ~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          200 YNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             TSEEESS--SEEECCCTTCEET
T ss_pred             HHEEEcC--cEEEEECcccccC
Confidence            9999998  9999999999764

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=99.65  E-value=2.5e-16  Score=138.88  Aligned_cols=104  Identities=20%  Similarity=0.251  Sum_probs=82.6

Q ss_pred             cccCcccCCcceeecCCCCceecCCCeEEEeeeecCCCCceEEEEEeecCCCCcEEEEecCCCCCCCCeeEEEEeCccEE
Q 003836           21 QSNGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAVNPAPRGSKLRLTANRGLV  100 (792)
Q Consensus        21 ~~~~~i~~g~~l~~~~~~~~lvS~~g~F~lGF~~~~~~~~~~~gIW~~~~~~~tvvWvANr~~P~~~~~~l~~~~~G~Lv  100 (792)
                      .++|+|.+||.|..++   +|+|  |.|.|-|...++     |.+ |..    ++||++|++.. ..++.+.|..|||||
T Consensus         4 ~~~dtL~~gq~L~~g~---~L~s--g~~~L~~q~dGn-----Lvl-~~~----~~vW~snt~~~-~~~~~l~l~~dGNLv   67 (110)
T 3r0e_B            4 FTNNLLFSGQVLYGDG---RLTA--KNHQLVMQGDCN-----LVL-YGG----KYGWQSNTHGN-GEHCFLRLNHKGELI   67 (110)
T ss_dssp             CBTTEEETTCEEETTE---EEEC--SSCEEEECTTSC-----EEE-ECS----SSCEECCCTTS-SSSCEEEECTTSCEE
T ss_pred             cccCEECCCCEecCCC---EEEe--CCEEEEEcCCCe-----EEE-ECC----eEEEECCCcCC-CcCEEEEEeCCCcEE
Confidence            4679999999998654   7887  459997765443     333 654    48999999863 234689999999999


Q ss_pred             EEcCCCCEEEEeccCCC-cceeEEEecCCcEEEEecCCcccccc
Q 003836          101 LEDPEGREIWKSEISTG-QAAFGVLYDTGNFLIVNTNSERLWQS  143 (792)
Q Consensus       101 l~~~~~~~vWst~~~~~-~~~~a~LldsGNlVl~~~~~~~lWQS  143 (792)
                      |+|.++.++|+|++... +..+|+|+|+|||||++   ..+|+|
T Consensus        68 l~d~~~~~iW~S~t~~~~~~~~~~L~~dGNlvly~---~~~W~t  108 (110)
T 3r0e_B           68 IKDDDFKTIWSSRSSSKQGEYVLILQDDGFGVIYG---PAIFET  108 (110)
T ss_dssp             EECTTCCEEEECCCCCSSSCCEEEECTTSCEEEEC---SEEEES
T ss_pred             EEeCCCCEEEEcCCcCCCCCEEEEEcCCccEEEec---CCEecC
Confidence            99999999999998643 34689999999999998   489987

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=99.64  E-value=1.2e-15  Score=135.29  Aligned_cols=107  Identities=13%  Similarity=0.197  Sum_probs=85.4

Q ss_pred             cccCcccCCcceeecCCCCceecCCCeEEEeeeecCCCCceEEEEEeecCCCCcEEEEecCCCCCCCCeeEEEEeCccEE
Q 003836           21 QSNGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAVNPAPRGSKLRLTANRGLV  100 (792)
Q Consensus        21 ~~~~~i~~g~~l~~~~~~~~lvS~~g~F~lGF~~~~~~~~~~~gIW~~~~~~~tvvWvANr~~P~~~~~~l~~~~~G~Lv  100 (792)
                      .+.|+|.+||.|..++   +|.  +|.|.|-|...++     |.+ |.. ...++||.+|+..+. .++.+.|..|||||
T Consensus         4 ~~~~tL~~gq~L~~g~---~L~--~g~~~L~~q~dGN-----LvL-~~~-~~~~~vWssnt~~~~-~~~~l~l~~dGNLV   70 (113)
T 3mez_B            4 RVRNVLFSSQVMYDNA---QLA--TRDYSLVMRDDCN-----LVL-TKG-SKTNIVWESGTSGRG-QHCFMRLGHSGELD   70 (113)
T ss_dssp             CCSSEEETTCEEETTC---EEE--ETTEEEEECTTSC-----EEE-EET-TTTEEEEECCCTTSC-SSCEEEECTTSCEE
T ss_pred             ccCCEeCCCCEECCCC---EeE--cCCEEEEEcCCCE-----EEE-EEC-CCCEEEEECCcccCC-cCEEEEEeCCCcEE
Confidence            3568999999998654   665  4889999976654     334 322 136899999998763 35789999999999


Q ss_pred             EEcCCCCEEEEeccCCC-cceeEEEecCCcEEEEecCCcccccc
Q 003836          101 LEDPEGREIWKSEISTG-QAAFGVLYDTGNFLIVNTNSERLWQS  143 (792)
Q Consensus       101 l~~~~~~~vWst~~~~~-~~~~a~LldsGNlVl~~~~~~~lWQS  143 (792)
                      |+|.+++++|+|++... +..+|+|+|+|||||++   ..+|+|
T Consensus        71 l~d~~~~~iW~S~t~~~~~~~~~~L~~dGnlvly~---~~~W~s  111 (113)
T 3mez_B           71 ITDDRLNTVFVSNTVGQEGDYVLILQINGQAVVYG---PAVWST  111 (113)
T ss_dssp             EECTTSCEEEECSCCCSSSCCEEEECTTSCEEEEC---SEEEES
T ss_pred             EECCCCCEEEECCCcCCCCCEEEEEcCCceEEEec---CCEecC
Confidence            99999999999998643 34689999999999997   689997

>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*

Probab=99.62  E-value=6e-16  Score=136.63  Aligned_cols=88  Identities=19%  Similarity=0.316  Sum_probs=73.0

Q ss_pred             CCeeEEEEeCccEEEEcCCCCEEEEeccCCCc-ceeEEEecCCcEEEEecCCccccccccCCcccccCCCccccceEEee
Q 003836           87 RGSKLRLTANRGLVLEDPEGREIWKSEISTGQ-AAFGVLYDTGNFLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSS  165 (792)
Q Consensus        87 ~~~~l~~~~~G~Lvl~~~~~~~vWst~~~~~~-~~~a~LldsGNlVl~~~~~~~lWQSFd~PtDtlLpg~~l~~~~~L~S  165 (792)
                      ....|.|..||||||++ .+++||++++...+ ..+|+|+|+|||||+|.++.++||||.                    
T Consensus        20 ~~~~l~~~~dGnlvl~~-~~~~vW~sn~~~~~~~~~l~l~~dGNLVl~~~~~~~~W~S~t--------------------   78 (110)
T 3a0c_A           20 PSYRLIMQGDCNFVLYD-SGKPVWASNTGGLGSGCRLTLHNNGNLVIYDQSNRVIWQTKT--------------------   78 (110)
T ss_dssp             TTEEEEECTTSCEEEEE-TTEEEEECCCTTSCSSCEEEECTTSCEEEECTTCCEEEECCC--------------------
T ss_pred             CCEEEEEcCCCcEEEEE-CCEEEEECCCCCCCCcEEEEEeCCCCEEEECCCCcEEEecCC--------------------
Confidence            45789999999999998 57899999986443 468999999999999998999999993                    


Q ss_pred             eccCCCCCCCceeEeecCCCceeeeeeccCCCcccccccccCCc
Q 003836          166 RRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWSNTF  209 (792)
Q Consensus       166 ~~s~~~~s~G~~~~~~~~~g~~~~~~~~~~~~~~~~~y~~~~~~  209 (792)
                           ++++|.|++.++++|+++++-  .       .||.+++.
T Consensus        79 -----~~~~g~~~l~l~~dGnlvl~~--~-------~~W~S~~~  108 (110)
T 3a0c_A           79 -----NGKEDHYVLVLQQDRNVVIYG--P-------VVWATGSG  108 (110)
T ss_dssp             -----CCSSSCCEEEECTTSCEEEEC--S-------EEEECSCC
T ss_pred             -----CCCCCCEEEEEeCCccEEEEC--C-------CEecCCCc
Confidence                 446799999999999987742  1       48877654

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=99.57  E-value=4.8e-15  Score=130.43  Aligned_cols=107  Identities=21%  Similarity=0.354  Sum_probs=84.9

Q ss_pred             ccCcccCCcceeecCCCCceecCCCeEEEeeeecCCCCceEEEEEeecCCCCcEEEEecCCCCCCCCeeEEEEeCccEEE
Q 003836           22 SNGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAVNPAPRGSKLRLTANRGLVL  101 (792)
Q Consensus        22 ~~~~i~~g~~l~~~~~~~~lvS~~g~F~lGF~~~~~~~~~~~gIW~~~~~~~tvvWvANr~~P~~~~~~l~~~~~G~Lvl  101 (792)
                      +.|||.+||.|..++   +|  .+|.|.|.|...++-      +.|..      +|.+|+..+ ..+..|.|..||||||
T Consensus         2 ~~dtL~~gq~L~~g~---~L--~~g~~~L~~q~dGNL------vl~~~------~Wssnt~~~-~~~~~l~l~~dGnLvl   63 (109)
T 3r0e_A            2 GTNYLLSGQTLDTEG---HL--KNGDFDLVMQDDCNL------VLYNG------NWQSNTANN-GRDCKLTLTDYGELVI   63 (109)
T ss_dssp             CCSEEETTCEECTTC---EE--EETTEEEEECTTSCE------EEETT------TEECCCTTS-CSSCEEEECTTSCEEE
T ss_pred             ccCCcCCCCCcCCCC---Ee--ECCCEEEEEecCCeE------EEEeC------eEEcCCCCC-CCcEEEEEcCCCeEEE
Confidence            568999999998654   56  579999999876543      22432      699998875 3457899999999999


Q ss_pred             EcCCCCEEEEeccCCC-cceeEEEecCCcEEEEecCCccccccccCCcccccCC
Q 003836          102 EDPEGREIWKSEISTG-QAAFGVLYDTGNFLIVNTNSERLWQSFDHPTDTLLPT  154 (792)
Q Consensus       102 ~~~~~~~vWst~~~~~-~~~~a~LldsGNlVl~~~~~~~lWQSFd~PtDtlLpg  154 (792)
                      .|.++.++|+|++... ...+|+|+|+|||||++   ..+|+|     .|.+||
T Consensus        64 ~d~~~~~vWss~t~~~~~~~~~~L~~dGNlvly~---~~~W~s-----~t~~~~  109 (109)
T 3r0e_A           64 KNGDGSTVWKSGAQSVKGNYAAVVHPDGRLVVFG---PSVFKI-----DPWVRG  109 (109)
T ss_dssp             ECTTSCEEEECCCCCSSSCCEEEEETTTEEEEEC---SEEEEE-----CTTSCC
T ss_pred             EeCCCCEEEcCCCcCCCcCEEEEEcCCCeEEEEe---cCEECC-----CCccCC
Confidence            9999999999998643 34689999999999997   689998     555554

>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1

Probab=99.57  E-value=6.2e-15  Score=131.81  Aligned_cols=86  Identities=23%  Similarity=0.365  Sum_probs=71.8

Q ss_pred             eeEEEEeCccEEEEcCCCCEEEEeccCCCc-ceeEEEecCCcEEEEecCCccccccccCCcccccCCCccccceEEeeec
Q 003836           89 SKLRLTANRGLVLEDPEGREIWKSEISTGQ-AAFGVLYDTGNFLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSSRR  167 (792)
Q Consensus        89 ~~l~~~~~G~Lvl~~~~~~~vWst~~~~~~-~~~a~LldsGNlVl~~~~~~~lWQSFd~PtDtlLpg~~l~~~~~L~S~~  167 (792)
                      ..|.|..||+|+|++. +++||++++...+ ...|+|+|+|||||+|.++.++||||                       
T Consensus        32 ~~L~~~~dgnlvly~~-~~~vW~sn~~~~~~~~~l~l~~dGNLVl~d~~~~~lW~S~-----------------------   87 (119)
T 1b2p_A           32 YRFIMQTDCNLVLYDN-NNPIWATNTGGLGNGCRAVLQPDGVLVVITNENVTVWQSP-----------------------   87 (119)
T ss_dssp             EEEEECTTSCEEEEET-TEEEEECCCTTSCSSCEEEECTTSCEEEECTTCCEEEECS-----------------------
T ss_pred             EEEEEecCCCEEEEEC-CEEEEeCCCccCCCceEEEEccCCEEEEEeCCCcEEEcCC-----------------------
Confidence            5788889999999987 8899999986543 36899999999999999899999999                       


Q ss_pred             cCCCCCCCceeEeecCCCceeeeeeccCCCcccccccccCCc
Q 003836          168 KDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWSNTF  209 (792)
Q Consensus       168 s~~~~s~G~~~~~~~~~g~~~~~~~~~~~~~~~~~y~~~~~~  209 (792)
                        +++++|.|+++++++|+++++.         .+||.+++.
T Consensus        88 --~~~~~g~~~l~l~~~Gnlvl~~---------~~~W~Sg~~  118 (119)
T 1b2p_A           88 --VAGKAGHYVLVLQPDRNVVIYG---------DALWATQTV  118 (119)
T ss_dssp             --CCCCSSCEEEEECTTSCEEEEE---------SEEEECCCC
T ss_pred             --CCCCCCCEEEEEECCCcEEEEC---------ccEeCCCCC
Confidence              3456899999999999977742         258887653

>1xd5_A Gastrodianin-1, antifungal protein GAFP-1; monocot mannose binding lectin, monomer, homogeneous beta- sheet; 2.00A {Gastrodia elata} SCOP: b.78.1.1 PDB: 1xd6_A

Probab=99.56  E-value=1e-14  Score=129.41  Aligned_cols=91  Identities=23%  Similarity=0.349  Sum_probs=74.1

Q ss_pred             CCeeEEEEeCccEEEEcCCCCEEEEeccCCCc-ceeEEEecCCcEEEEecCCccccccccCCcccccCCCccccceEEee
Q 003836           87 RGSKLRLTANRGLVLEDPEGREIWKSEISTGQ-AAFGVLYDTGNFLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSS  165 (792)
Q Consensus        87 ~~~~l~~~~~G~Lvl~~~~~~~vWst~~~~~~-~~~a~LldsGNlVl~~~~~~~lWQSFd~PtDtlLpg~~l~~~~~L~S  165 (792)
                      ....|.|..||+|+|++. +++||++++...+ ..+|+|+|+|||||+| ++.++||||+.                   
T Consensus        19 ~~~~L~~~~dgnlvl~~~-~~~vW~sn~~~~~~~~~l~l~~~GNLvl~d-~~~~~W~S~~~-------------------   77 (112)
T 1xd5_A           19 GGYLFIIQNDCNLVLYDN-NRAVWASGTNGKASGCVLKMQNDGNLVIYS-GSRAIWASNTN-------------------   77 (112)
T ss_dssp             TTEEEEECTTSCEEEEET-TEEEEECCCTTSCSSEEEEECTTSCEEEEE-TTEEEEECCCC-------------------
T ss_pred             CCEEEEEcCCCcEEEEEC-CEEEEeCCCcCCCCCEEEEEeCCCCEEEEc-CCEEEEECCcc-------------------
Confidence            346899999999999987 7899999986433 4689999999999999 78899999953                   


Q ss_pred             eccCCCCCCCceeEeecCCCceeeeeeccCCCcccccccccCCcc
Q 003836          166 RRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWSNTFD  210 (792)
Q Consensus       166 ~~s~~~~s~G~~~~~~~~~g~~~~~~~~~~~~~~~~~y~~~~~~~  210 (792)
                            +++|.|+++++++|+++++.  ..    ..+||.++++.
T Consensus        78 ------~~~g~~~l~l~~dGnlvl~~--~~----~~~~W~S~~~~  110 (112)
T 1xd5_A           78 ------RQNGNYYLILQRDRNVVIYD--NS----NNAIWATHTNV  110 (112)
T ss_dssp             ------CSCCCCEEEECTTSCEEEEC--TT----SCEEEECCCCC
T ss_pred             ------CCCCCEEEEEeCCCcEEEEC--CC----CceEEECCCcc
Confidence                  45789999999999977742  11    14789888774

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.55  E-value=3.4e-15  Score=160.46  Aligned_cols=139  Identities=11%  Similarity=0.025  Sum_probs=95.1

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccc--------------cchHHHHHHHHHhcccCCCCcccccceec
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ--------------DSEKEFKAEVNGIGQTHHKNLVRLLGYCD  569 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~--------------~~~~~~~~Ei~~l~~l~h~niv~l~g~~~  569 (792)
                      .+...||+|++|.||+|...  +++.||||+++....              ........++++.+...|+|+++++....
T Consensus        98 ~I~~~IG~Gk~a~VY~a~d~--~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv  175 (397)
T 4gyi_A           98 SVGSRIGVGKESDIMIVADE--KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF  175 (397)
T ss_dssp             EEEEEEEECSSEEEEEEECT--TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EecCEeeeCCceEEEEEECC--CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            34567999999999999754  467899998753210              00112222233333333444444432221


Q ss_pred             c------CCceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCC---
Q 003836          570 E------GQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYN---  640 (792)
Q Consensus       570 ~------~~~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~---  640 (792)
                      .      ....+|||||+++++|..+..      ......++.||+.+|.|||+.   +||||||||.|||+++++.   
T Consensus       176 ~vp~p~~~~~~~LVME~i~G~~L~~l~~------~~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dgd~~d  246 (397)
T 4gyi_A          176 PVPEPIAQSRHTIVMSLVDALPMRQVSS------VPDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEKDAED  246 (397)
T ss_dssp             SCCCEEEEETTEEEEECCSCEEGGGCCC------CSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEECSSC
T ss_pred             CCCeeeeccCceEEEEecCCccHhhhcc------cHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCCCccc
Confidence            1      122369999999998877653      234467889999999999998   9999999999999988763   


Q ss_pred             -------eEEeecCCCcccc
Q 003836          641 -------ARISDFGLAKLLT  653 (792)
Q Consensus       641 -------~kl~Dfg~a~~~~  653 (792)
                             +.|+||+-+....
T Consensus       247 ~~~~~~~~~iID~~Q~V~~~  266 (397)
T 4gyi_A          247 PSSITLTPIIIXFPQMVSMD  266 (397)
T ss_dssp             TTSEEEEEEECCCTTCEETT
T ss_pred             ccccccceEEEEeCCcccCC
Confidence                   8999999886543

>2dpf_A Curculin; sweet taste, taste modifying, plant protein; 1.50A {Curculigo latifolia} PDB: 2d04_B* 2d04_A*

Probab=99.51  E-value=4.8e-14  Score=125.66  Aligned_cols=90  Identities=22%  Similarity=0.359  Sum_probs=74.7

Q ss_pred             CCeeEEEEeCccEEEEcCCCCEEEEeccCCCc-ceeEEEecCCcEEEEecCCccccccccCCcccccCCCccccceEEee
Q 003836           87 RGSKLRLTANRGLVLEDPEGREIWKSEISTGQ-AAFGVLYDTGNFLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSS  165 (792)
Q Consensus        87 ~~~~l~~~~~G~Lvl~~~~~~~vWst~~~~~~-~~~a~LldsGNlVl~~~~~~~lWQSFd~PtDtlLpg~~l~~~~~L~S  165 (792)
                      ....|.|..||+|+|++ .+++||++++.... ..+++|+++|||||+|.++.++|||||+|                  
T Consensus        20 g~~~L~~~~dgnlvly~-~~~~vW~sn~~~~~~~~~l~l~~~GnLvl~d~~~~~vW~S~~~~------------------   80 (115)
T 2dpf_A           20 GAYTLTIQNKCNLVKYQ-NGRQIWASNTDRRGSGCRLTLLSDGNLVIYDHNNNDVWGSACWG------------------   80 (115)
T ss_dssp             TTEEEEECTTSCEEEEE-TTEEEEECSCTTSCSSCEEEECTTSCEEEECTTCCEEEECCCCC------------------
T ss_pred             CCEEEEEcCCCcEEEEe-CCEEEEeCCCCCCCCceEEEECCCCcEEEECCCceEEEEcCCCC------------------
Confidence            34678899999999998 57899999986443 46899999999999998889999999983                  


Q ss_pred             eccCCCCCCCceeEeecCCCceeeeeeccCCCcccccccccCCccc
Q 003836          166 RRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWSNTFDT  211 (792)
Q Consensus       166 ~~s~~~~s~G~~~~~~~~~g~~~~~~~~~~~~~~~~~y~~~~~~~~  211 (792)
                             ++|.|++.++++|+++++  +.       .||.++++..
T Consensus        81 -------~~g~~~l~l~~dGnlvl~--~~-------~~W~S~~~~~  110 (115)
T 2dpf_A           81 -------DNGKYALVLQKDGRFVIY--GP-------VLWSLGPNGC  110 (115)
T ss_dssp             -------SSSCCEEEECTTSCEEEE--CS-------EEECSSTTCB
T ss_pred             -------CCCCEEEEEeCCCeEEEE--CC-------CEEECCCCCC
Confidence                   568899999999998774  11       5898888753

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=99.42  E-value=1.9e-13  Score=120.57  Aligned_cols=102  Identities=13%  Similarity=0.177  Sum_probs=79.7

Q ss_pred             cCcccCCcceeecCCCCceecCCCeEEEeeeecCCCCceEEEEEeecCCCCcEEEEecCCCCCCCCeeEEEEeCccEEEE
Q 003836           23 NGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAVNPAPRGSKLRLTANRGLVLE  102 (792)
Q Consensus        23 ~~~i~~g~~l~~~~~~~~lvS~~g~F~lGF~~~~~~~~~~~gIW~~~~~~~tvvWvANr~~P~~~~~~l~~~~~G~Lvl~  102 (792)
                      +|+|.+||.|.+++   .|  .+|.|.|.|...++-      +-|..   .. ||.+|+..+ ...+.+.|..||||||+
T Consensus         2 ~~~l~~gq~L~~g~---~L--~~g~~~L~~q~dGnL------vl~~~---~~-vW~snt~~~-~~~~~l~l~~dGNLVl~   65 (111)
T 3mez_A            2 NNVLLTGDVIHTDN---QL--SYESAAFVMQGDCNL------VLYNE---AG-GFQSNTHGR-GVDCTLRLNNRGQLEIH   65 (111)
T ss_dssp             TTEEETTCEECTTC---EE--EETTEEEEECTTSCE------EEECS---SC-CEECCCTTS-CSSCEEEECTTSCEEEE
T ss_pred             cCEeCCCCEeCCCC---EE--ecCCEEEEEccCCeE------EEECC---CC-EEECCcccC-CcCEEEEEcCCCcEEEE
Confidence            57899999998654   56  479999999766542      22432   23 999999876 33578999999999999


Q ss_pred             cCCCC-EEEEeccCC---CcceeEEEecCCcEEEEecCCcccccc
Q 003836          103 DPEGR-EIWKSEIST---GQAAFGVLYDTGNFLIVNTNSERLWQS  143 (792)
Q Consensus       103 ~~~~~-~vWst~~~~---~~~~~a~LldsGNlVl~~~~~~~lWQS  143 (792)
                      |.++. ++|+|++..   .+..+|+|+|+|||||++   ..+|+|
T Consensus        66 ~~~~~~~vW~S~t~~~~~~~~~~l~Lq~dGNlvly~---~~~W~s  107 (111)
T 3mez_A           66 SANSNTPVWVYPRSVNTVRGNYAATLGPDQHVTIYG---PAIWST  107 (111)
T ss_dssp             CSSCSSCSEEESSSCCCCSSCCEEEECTTSCEEEEC---SEEEEC
T ss_pred             eCCCCEEEEEeccccCCCCcCEEEEECCCCeEEEec---cCEEcc
Confidence            98876 599999632   234689999999999997   689987

>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=99.33  E-value=3.1e-12  Score=113.25  Aligned_cols=85  Identities=21%  Similarity=0.271  Sum_probs=67.7

Q ss_pred             CCCCCC-CCeeEEEEeCccEEEEcC-CCCEEEEeccCCCc-ceeEEEecCCcEEEEecCCccccccccCCcccccCCCcc
Q 003836           81 AVNPAP-RGSKLRLTANRGLVLEDP-EGREIWKSEISTGQ-AAFGVLYDTGNFLIVNTNSERLWQSFDHPTDTLLPTQTM  157 (792)
Q Consensus        81 r~~P~~-~~~~l~~~~~G~Lvl~~~-~~~~vWst~~~~~~-~~~a~LldsGNlVl~~~~~~~lWQSFd~PtDtlLpg~~l  157 (792)
                      .+.|+. ....|.+..||||||++. .++++|++++...+ ...|+|+|+|||||+|.++.++|||-.+-          
T Consensus        17 ~g~~L~~g~~~L~~q~dGNLvL~~~~~~~~vWssnt~~~~~~~~l~l~~dGNLVl~d~~~~~iW~S~t~~----------   86 (113)
T 3mez_B           17 DNAQLATRDYSLVMRDDCNLVLTKGSKTNIVWESGTSGRGQHCFMRLGHSGELDITDDRLNTVFVSNTVG----------   86 (113)
T ss_dssp             TTCEEEETTEEEEECTTSCEEEEETTTTEEEEECCCTTSCSSCEEEECTTSCEEEECTTSCEEEECSCCC----------
T ss_pred             CCCEeEcCCEEEEEcCCCEEEEEECCCCEEEEECCcccCCcCEEEEEeCCCcEEEECCCCCEEEECCCcC----------
Confidence            344553 346899999999999998 48899999986443 46899999999999999888999983210          


Q ss_pred             ccceEEeeeccCCCCCCCceeEeecCCCceeee
Q 003836          158 ERGGVVSSRRKDTYFSRGRFQFRLLEDGNAVLN  190 (792)
Q Consensus       158 ~~~~~L~S~~s~~~~s~G~~~~~~~~~g~~~~~  190 (792)
                                     ..|.|.+.++.||++++|
T Consensus        87 ---------------~~~~~~~~L~~dGnlvly  104 (113)
T 3mez_B           87 ---------------QEGDYVLILQINGQAVVY  104 (113)
T ss_dssp             ---------------SSSCCEEEECTTSCEEEE
T ss_pred             ---------------CCCCEEEEEcCCceEEEe
Confidence                           135689999999999986

>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0

Probab=99.30  E-value=6.3e-12  Score=110.82  Aligned_cols=88  Identities=18%  Similarity=0.224  Sum_probs=69.5

Q ss_pred             CCeeEEEEeCccEEEEcCCCCEEEEeccCCCc-ceeEEEecCCcEEEEecCCc-cccccccCCcccccCCCccccceEEe
Q 003836           87 RGSKLRLTANRGLVLEDPEGREIWKSEISTGQ-AAFGVLYDTGNFLIVNTNSE-RLWQSFDHPTDTLLPTQTMERGGVVS  164 (792)
Q Consensus        87 ~~~~l~~~~~G~Lvl~~~~~~~vWst~~~~~~-~~~a~LldsGNlVl~~~~~~-~lWQSFd~PtDtlLpg~~l~~~~~L~  164 (792)
                      ....|.+..||||||++.++  +|+|++...+ ...|+|+|+|||||++.++. ++|||.-+                  
T Consensus        20 g~~~L~~q~dGnLvl~~~~~--vW~snt~~~~~~~~l~l~~dGNLVl~~~~~~~~vW~S~t~------------------   79 (111)
T 3mez_A           20 ESAAFVMQGDCNLVLYNEAG--GFQSNTHGRGVDCTLRLNNRGQLEIHSANSNTPVWVYPRS------------------   79 (111)
T ss_dssp             TTEEEEECTTSCEEEECSSC--CEECCCTTSCSSCEEEECTTSCEEEECSSCSSCSEEESSS------------------
T ss_pred             CCEEEEEccCCeEEEECCCC--EEECCcccCCcCEEEEEcCCCcEEEEeCCCCEEEEEeccc------------------
Confidence            34689999999999999876  9999986543 36899999999999998776 49999621                  


Q ss_pred             eeccCCCCCCCceeEeecCCCceeeeeeccCCCcccccccccCC
Q 003836          165 SRRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWSNT  208 (792)
Q Consensus       165 S~~s~~~~s~G~~~~~~~~~g~~~~~~~~~~~~~~~~~y~~~~~  208 (792)
                           .....|.|.+.++.||++++|.         .++|.+++
T Consensus        80 -----~~~~~~~~~l~Lq~dGNlvly~---------~~~W~s~t  109 (111)
T 3mez_A           80 -----VNTVRGNYAATLGPDQHVTIYG---------PAIWSTPA  109 (111)
T ss_dssp             -----CCCCSSCCEEEECTTSCEEEEC---------SEEEECCC
T ss_pred             -----cCCCCcCEEEEECCCCeEEEec---------cCEEccCC
Confidence                 1113578999999999999863         35787665

>3m7h_A Putidacin L1; monocot mannose-binding lectin, bacteriocin, LLPA, pseudomon bacterial toxin, siras, antimicrobial protein; 2.20A {Pseudomonas SP} PDB: 3m7j_A*

Probab=99.27  E-value=1e-11  Score=127.97  Aligned_cols=112  Identities=15%  Similarity=0.280  Sum_probs=86.1

Q ss_pred             ccCcccCCcc----eeecCCCCceecCCCeEEEeeeecC--CCCceEEEEEeecCCCCcEEEEecCCCCCCCCeeEEEEe
Q 003836           22 SNGTISIGQQ----LTAAESTEPWLSPSKDFALGFHQLD--SKDLFLPAIWYYKIPSKTIVWYASAVNPAPRGSKLRLTA   95 (792)
Q Consensus        22 ~~~~i~~g~~----l~~~~~~~~lvS~~g~F~lGF~~~~--~~~~~~~gIW~~~~~~~tvvWvANr~~P~~~~~~l~~~~   95 (792)
                      .+||+.||+.    |..+   +.|+| +..++.|+|+..  ...+.+  + |.+  ..+++|.+++..+-.  ..+.+..
T Consensus       135 ptdtlLpg~~~~~~l~~g---~~L~S-~~dps~G~fsl~l~~dGnlv--L-y~~--~~~~yW~Sgt~~~~~--~~l~l~~  203 (276)
T 3m7h_A          135 PAIPLVPGAIDSLLLAPG---SELVQ-GVVYGAGASKLVFQGDGNLV--A-YGP--NGAATWNAGTQGKGA--VRAVFQG  203 (276)
T ss_dssp             TTSCCCCSCTTCEEECSS---EEECT-TCEEEETTEEEEECTTSCEE--E-ECT--TSSEEEECCCTTTTC--CEEEECT
T ss_pred             cccccccccccccccccC---ccccc-CCCCCCceEEEeecCCceEE--E-EeC--CCeEEEECCCCCCcc--EEEEEcC
Confidence            4689999999    6543   35655 457777777642  222343  3 332  258999999988733  6889999


Q ss_pred             CccEEEEcCCCCEEEEeccCCCcceeEEEecCCcEEEEecCCccccccccC
Q 003836           96 NRGLVLEDPEGREIWKSEISTGQAAFGVLYDTGNFLIVNTNSERLWQSFDH  146 (792)
Q Consensus        96 ~G~Lvl~~~~~~~vWst~~~~~~~~~a~LldsGNlVl~~~~~~~lWQSFd~  146 (792)
                      +|+|+++|.++.++|++++......+|+|+++|||||++.  ..+||||||
T Consensus       204 dGnLvl~d~~~~~vWsS~t~~~~~~rl~Ld~dGnLvly~~--~~~Wqsf~~  252 (276)
T 3m7h_A          204 DGNLVVYGAGNAVLWHSHTGGHASAVLRLQANGSIAILDE--KPVWARFGF  252 (276)
T ss_dssp             TSCEEEECTTSCEEEECSCTTCTTCEEEECTTSCEEEEEE--EEEEESSSC
T ss_pred             CCeEEEEeCCCcEEEEecCCCCCCEEEEEcCCccEEEEcC--CCeEEccCc
Confidence            9999999998899999998755567899999999999986  689999998

>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*

Probab=99.25  E-value=2.5e-11  Score=106.74  Aligned_cols=88  Identities=19%  Similarity=0.300  Sum_probs=69.7

Q ss_pred             CCeeEEEEeCccEEEEcCCCCEEEEeccCCCc-ceeEEEecCCcEEEEecCCccccccccCCcccccCCCccccceEEee
Q 003836           87 RGSKLRLTANRGLVLEDPEGREIWKSEISTGQ-AAFGVLYDTGNFLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSS  165 (792)
Q Consensus        87 ~~~~l~~~~~G~Lvl~~~~~~~vWst~~~~~~-~~~a~LldsGNlVl~~~~~~~lWQSFd~PtDtlLpg~~l~~~~~L~S  165 (792)
                      ....|.|..||||||++. ++++|++++...+ ...++|+|+|||||+|.++.++|||....                  
T Consensus        19 g~~~L~~q~dGnLvly~~-~~~vW~snt~~~~~~~~l~l~~dGNLvl~~~~~~~~W~S~t~~------------------   79 (109)
T 3dzw_A           19 GRYVFIMQEDCNLVLYDV-DKPIWATNTGGLDRRCHLSMQSDGNLVVYSPRNNPIWASNTGG------------------   79 (109)
T ss_dssp             TTEEEEECTTSCEEEEET-TEEEEECCCTTSSSSCEEEECTTSCEEEECTTSCEEEECCCCC------------------
T ss_pred             CCEEEEEcCCCcEEEEeC-CEEEEECCcccCCCCEEEEEeCCCCEEEECCCCCEEEECCCCC------------------
Confidence            346899999999999987 6899999986543 46899999999999998889999985321                  


Q ss_pred             eccCCCCCCCceeEeecCCCceeeeeeccCCCcccccccccCCc
Q 003836          166 RRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWSNTF  209 (792)
Q Consensus       166 ~~s~~~~s~G~~~~~~~~~g~~~~~~~~~~~~~~~~~y~~~~~~  209 (792)
                             ..+.|.+.++.||++++|.         .+.|.+++.
T Consensus        80 -------~~~~~~~~L~ddGNlvly~---------~~~W~s~t~  107 (109)
T 3dzw_A           80 -------ENGNYVCVLQKDRNVVIYG---------TARWATGTN  107 (109)
T ss_dssp             -------SSSCEEEEECTTSCEEEEE---------SCCCCCCCC
T ss_pred             -------CCCCEEEEEeCCCEEEEEC---------CCEEeCCCc
Confidence                   2356889999999999863         146766553

>3r0e_B Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=99.17  E-value=6.6e-11  Score=104.04  Aligned_cols=76  Identities=22%  Similarity=0.415  Sum_probs=62.5

Q ss_pred             CeeEEEEeCccEEEEcCCCCEEEEeccCCCc-ceeEEEecCCcEEEEecCCccccccccCCcccccCCCccccceEEeee
Q 003836           88 GSKLRLTANRGLVLEDPEGREIWKSEISTGQ-AAFGVLYDTGNFLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSSR  166 (792)
Q Consensus        88 ~~~l~~~~~G~Lvl~~~~~~~vWst~~~~~~-~~~a~LldsGNlVl~~~~~~~lWQSFd~PtDtlLpg~~l~~~~~L~S~  166 (792)
                      ...|.+..||||||++.  +++|++++...+ ...++|+|+|||||+|.++.++|||-.+-                   
T Consensus        25 ~~~L~~q~dGnLvl~~~--~~vW~snt~~~~~~~~l~l~~dGNLvl~d~~~~~iW~S~t~~-------------------   83 (110)
T 3r0e_B           25 NHQLVMQGDCNLVLYGG--KYGWQSNTHGNGEHCFLRLNHKGELIIKDDDFKTIWSSRSSS-------------------   83 (110)
T ss_dssp             SCEEEECTTSCEEEECS--SSCEECCCTTSSSSCEEEECTTSCEEEECTTCCEEEECCCCC-------------------
T ss_pred             CEEEEEcCCCeEEEECC--eEEEECCCcCCCcCEEEEEeCCCcEEEEeCCCCEEEEcCCcC-------------------
Confidence            46788999999999876  689999986543 35899999999999999889999984321                   


Q ss_pred             ccCCCCCCCceeEeecCCCceeee
Q 003836          167 RKDTYFSRGRFQFRLLEDGNAVLN  190 (792)
Q Consensus       167 ~s~~~~s~G~~~~~~~~~g~~~~~  190 (792)
                            ..|.|.+.++.||++++|
T Consensus        84 ------~~~~~~~~L~~dGNlvly  101 (110)
T 3r0e_B           84 ------KQGEYVLILQDDGFGVIY  101 (110)
T ss_dssp             ------SSSCCEEEECTTSCEEEE
T ss_pred             ------CCCCEEEEEcCCccEEEe
Confidence                  235688999999999986

>1dlp_A Lectin scafet precursor; two-domain lectin, beta prism II fold, native, sugar binding protein; 3.30A {Hyacinthoides hispanica} SCOP: b.78.1.1 b.78.1.1

Probab=99.15  E-value=1.5e-10  Score=117.25  Aligned_cols=143  Identities=19%  Similarity=0.271  Sum_probs=98.1

Q ss_pred             CCeeEEEEeCccEEEEcCCCCEEEEeccCCCcceeEEEecCCcEEEEecCCccccccccCCcccccCCCccccceEEeee
Q 003836           87 RGSKLRLTANRGLVLEDPEGREIWKSEISTGQAAFGVLYDTGNFLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSSR  166 (792)
Q Consensus        87 ~~~~l~~~~~G~Lvl~~~~~~~vWst~~~~~~~~~a~LldsGNlVl~~~~~~~lWQSFd~PtDtlLpg~~l~~~~~L~S~  166 (792)
                      ....|.|..||+|+|.+. +++||++|+......+++|+++|||||+|+++.++|+|+++.                   
T Consensus        26 g~f~l~f~~~gnl~ly~~-~~~vW~an~~~~~~~~l~l~~dGnLvl~d~~~~~vW~s~~~~-------------------   85 (236)
T 1dlp_A           26 SSFRFTMQSDCNLVLFDS-DVRVWASNTAGATGCRAVLQSDGLLVILTAQNTIRWSSGTKG-------------------   85 (236)
T ss_dssp             TTEEEEECTTSCEEEEES-SSEEECCCCCSCSCCBCCBCSSSCBCCBCTTTCCSCCCCCCC-------------------
T ss_pred             CCEEEEECCCCcEEEEEC-CEEEEECCCCCCCCeEEEEcCCCcEEEEcCCCcEEEeCCccc-------------------
Confidence            345777888899999886 789999998655566899999999999999999999998751                   


Q ss_pred             ccCCCCCCCceeEeecCCCceeeeeeccCCCcccccccccCCcccc------------c------------------CCC
Q 003836          167 RKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWSNTFDTN------------R------------------SNA  216 (792)
Q Consensus       167 ~s~~~~s~G~~~~~~~~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~------------~------------------~~~  216 (792)
                            +.|.|.+.++++|+++++.         ..+|.+......            .                  +..
T Consensus        86 ------~~~~~~~~l~d~Gnlvl~~---------~~~W~S~~~p~~t~~lp~~g~d~L~~gq~~~~~~~~L~s~~d~s~G  150 (236)
T 1dlp_A           86 ------SIGNYVLVLQPDRTVTIYG---------PGLWDSGTSNKGSVVVANNGNSILYSTQGNDNHPQTLHATQSLQLS  150 (236)
T ss_dssp             ------CSSCCEEEECSSSCEEEEC---------SEEEECSCCCSSCCCCSSCCCEECCCC--CCCCCCEECSSCCCBCS
T ss_pred             ------cCCcEEEEEeCCCCEEEec---------CCEEECCCCCCcccccCCccceEEecCCcCCCccceEEcCcEeecC
Confidence                  2466788999999998851         135544332110            0                  113


Q ss_pred             cceeEEccCCcEEEEecccceeeeccccccccccEEEEEEecCCcEEEEec
Q 003836          217 GYRVVFNESGQLYVLRENKQRASLVPETVSAKENYLRATLNFDGVFIFYSH  267 (792)
Q Consensus       217 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~dG~l~~y~~  267 (792)
                      .+.+.++.+|.++++..+  ..+....+. +.....+++|+.+|++++|..
T Consensus       151 ~~~l~l~~dG~LvL~~~~--~~~W~s~~~-~~~~~~~~~L~~~Gnl~ly~~  198 (236)
T 1dlp_A          151 PYRLSMETDCNLVLFDRD--DRVWSTNTA-GKGTGCRAVLQPNGRMDVLTN  198 (236)
T ss_dssp             SCEEEEETTTEEEEEBTT--BCCSCCCCC-SSCSSCEEEEETTTEEEEEET
T ss_pred             cEEEEECCCCcEEEEcCC--EeEEeCCCc-CCCCceEEEECCCCcEEEEeC
Confidence            466778888887776543  222221111 111225788999999998863

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.12  E-value=9.4e-11  Score=121.10  Aligned_cols=138  Identities=13%  Similarity=0.053  Sum_probs=108.2

Q ss_pred             hhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccC-CCCcccccceeccCCceEEEEEeccCC
Q 003836          506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH-HKNLVRLLGYCDEGQNRLLVYEFMSNG  584 (792)
Q Consensus       506 ~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~g~~~~~~~~~lV~E~~~~g  584 (792)
                      ...++.|+.+.||+....   ++.+++|+...........+.+|+++++.+. |..+.++++++.+.+..++||||++|.
T Consensus        19 ~~~~~g~s~~~v~~~~~~---~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~   95 (263)
T 3tm0_A           19 VKDTEGMSPAKVYKLVGE---NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGV   95 (263)
T ss_dssp             EECCSCCSSSEEEEEECS---SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSE
T ss_pred             EeeccCCCCCeEEEEECC---CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCe
Confidence            456788888999998532   4689999987532233456899999999884 677889999998888999999999999


Q ss_pred             CccccccCCCCCchhHHHHHHHHHHHHHHHHhhcc---------------------------------------------
Q 003836          585 TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEEC---------------------------------------------  619 (792)
Q Consensus       585 sL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~---------------------------------------------  619 (792)
                      +|.+.+.     +......++.+++++|+.||+..                                             
T Consensus        96 ~l~~~~~-----~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  170 (263)
T 3tm0_A           96 LCSEEYE-----DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPREL  170 (263)
T ss_dssp             EHHHHCC-----TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHH
T ss_pred             ehhhccC-----CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHH
Confidence            9887642     22344578899999999999810                                             


Q ss_pred             -----------CCCeEecCCCCCcEEEcCCCCeEEeecCCCcc
Q 003836          620 -----------CTQIIHCDIKPQNILLDDHYNARISDFGLAKL  651 (792)
Q Consensus       620 -----------~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~  651 (792)
                                 ...++|+|++|.|||++++..+.|+||+.+..
T Consensus       171 ~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          171 YDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             HHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             HHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence                       13599999999999998766677999998753

>3r0e_A Lectin; carbohydrate binding, carbohydrate, sugar binding protein; 2.40A {Remusatia vivipara}

Probab=99.06  E-value=2.8e-10  Score=99.81  Aligned_cols=85  Identities=21%  Similarity=0.320  Sum_probs=66.9

Q ss_pred             CeeEEEEeCccEEEEcCCCCEEEEeccCCCc-ceeEEEecCCcEEEEecCCccccccccCCcccccCCCccccceEEeee
Q 003836           88 GSKLRLTANRGLVLEDPEGREIWKSEISTGQ-AAFGVLYDTGNFLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSSR  166 (792)
Q Consensus        88 ~~~l~~~~~G~Lvl~~~~~~~vWst~~~~~~-~~~a~LldsGNlVl~~~~~~~lWQSFd~PtDtlLpg~~l~~~~~L~S~  166 (792)
                      ...|.+..||||||+++    +|+|++...+ ...++|+++|||||+|.++.++|+|-.+                    
T Consensus        22 ~~~L~~q~dGNLvl~~~----~Wssnt~~~~~~~~l~l~~dGnLvl~d~~~~~vWss~t~--------------------   77 (109)
T 3r0e_A           22 DFDLVMQDDCNLVLYNG----NWQSNTANNGRDCKLTLTDYGELVIKNGDGSTVWKSGAQ--------------------   77 (109)
T ss_dssp             TEEEEECTTSCEEEETT----TEECCCTTSCSSCEEEECTTSCEEEECTTSCEEEECCCC--------------------
T ss_pred             CEEEEEecCCeEEEEeC----eEEcCCCCCCCcEEEEEcCCCeEEEEeCCCCEEEcCCCc--------------------
Confidence            45899999999999984    7999987543 4689999999999999988999976210                    


Q ss_pred             ccCCCCCCCceeEeecCCCceeeeeeccCCCcccccccccCCcc
Q 003836          167 RKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWSNTFD  210 (792)
Q Consensus       167 ~s~~~~s~G~~~~~~~~~g~~~~~~~~~~~~~~~~~y~~~~~~~  210 (792)
                           ...+.|.+.+++||++++|.         .+.|.++++.
T Consensus        78 -----~~~~~~~~~L~~dGNlvly~---------~~~W~s~t~~  107 (109)
T 3r0e_A           78 -----SVKGNYAAVVHPDGRLVVFG---------PSVFKIDPWV  107 (109)
T ss_dssp             -----CSSSCCEEEEETTTEEEEEC---------SEEEEECTTS
T ss_pred             -----CCCcCEEEEEcCCCeEEEEe---------cCEECCCCcc
Confidence                 12467889999999999863         3578777663

>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*

Probab=99.01  E-value=1e-09  Score=95.48  Aligned_cols=76  Identities=26%  Similarity=0.516  Sum_probs=62.5

Q ss_pred             eeEEEEeCccEEEEcCCCCEEEEeccCCC--cceeEEEecCCcEEEEecCCccccccccCCcccccCCCccccceEEeee
Q 003836           89 SKLRLTANRGLVLEDPEGREIWKSEISTG--QAAFGVLYDTGNFLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSSR  166 (792)
Q Consensus        89 ~~l~~~~~G~Lvl~~~~~~~vWst~~~~~--~~~~a~LldsGNlVl~~~~~~~lWQSFd~PtDtlLpg~~l~~~~~L~S~  166 (792)
                      -.|.+..||||||++. +++||++++...  ....+.|+++|||||+|.++.++|+|-.                     
T Consensus        21 y~l~~q~DgNLvly~~-~~~vW~ant~~~~~~~~~L~l~~dGnLvL~d~~~~~vWss~t---------------------   78 (105)
T 4h3o_A           21 YHFIMQDDCNLVLYDH-STSTWASNTEIGGKSGCSAVLQSDGNFVVYDSSGRSLWASHS---------------------   78 (105)
T ss_dssp             EEEEECTTSCEEEEET-TEEEEECCCCCTTCCSCEEEECTTSCEEEECTTCCEEEECCC---------------------
T ss_pred             EEEEECCCCeEEEEEC-CEEEEEecCCCCCCccEEEEEeCCccEEEECCCcEEEEEecC---------------------
Confidence            5788999999999984 589999998643  3467999999999999999999998721                     


Q ss_pred             ccCCCCCCCceeEeecCCCceeee
Q 003836          167 RKDTYFSRGRFQFRLLEDGNAVLN  190 (792)
Q Consensus       167 ~s~~~~s~G~~~~~~~~~g~~~~~  190 (792)
                          ....+.+.+.+++||++++|
T Consensus        79 ----~~~~~~~~l~L~ddGNlVly   98 (105)
T 4h3o_A           79 ----TRGSGNYILILQDDGNVIIY   98 (105)
T ss_dssp             ----CCCSSCEEEEECTTSCEEEE
T ss_pred             ----CCCCCCEEEEEeCCCeEEEE
Confidence                12356789999999999985

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.92  E-value=1.6e-09  Score=111.33  Aligned_cols=130  Identities=15%  Similarity=0.048  Sum_probs=97.5

Q ss_pred             cC-ccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCC--cccccceeccCCceEEEEEeccCCC
Q 003836          509 LG-RGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKN--LVRLLGYCDEGQNRLLVYEFMSNGT  585 (792)
Q Consensus       509 lG-~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~n--iv~l~g~~~~~~~~~lV~E~~~~gs  585 (792)
                      ++ .|..+.||+....  +++.+++|+....   ....+.+|+++++.+++.+  +.+++++...++..++||||+++.+
T Consensus        27 ~~~gg~~~~v~~~~~~--~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~  101 (264)
T 1nd4_A           27 QTIGCSDAAVFRLSAQ--GRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQD  101 (264)
T ss_dssp             CSCTTSSCEEEEEECT--TSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEE
T ss_pred             cccCCCCceEEEEecC--CCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcc
Confidence            44 5556999998543  3457999987643   2356788999999886545  5568888888888999999999988


Q ss_pred             ccccccCCCCCchhHHHHHHHHHHHHHHHHhhcc----------------------------------------------
Q 003836          586 VASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEEC----------------------------------------------  619 (792)
Q Consensus       586 L~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~----------------------------------------------  619 (792)
                      |.  ...      .....++.++++.|+.||+..                                              
T Consensus       102 l~--~~~------~~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (264)
T 1nd4_A          102 LL--SSH------LAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFAR  173 (264)
T ss_dssp             TT--TSC------CCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHH
T ss_pred             cC--cCc------CCHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHH
Confidence            84  211      123467788888888888742                                              


Q ss_pred             ---------CCCeEecCCCCCcEEEcCCCCeEEeecCCCcc
Q 003836          620 ---------CTQIIHCDIKPQNILLDDHYNARISDFGLAKL  651 (792)
Q Consensus       620 ---------~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~  651 (792)
                               ...++|+|++|.|||++++..+.|+||+.+..
T Consensus       174 l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          174 LKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  214 (264)
T ss_dssp             HHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             HHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence                     11399999999999998876678999999863

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.87  E-value=6e-09  Score=112.85  Aligned_cols=141  Identities=15%  Similarity=0.184  Sum_probs=105.6

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcc--ccc-ccchHHHHHHHHHhcccC--CCCcccccceeccC---CceEEEE
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN--SVF-QDSEKEFKAEVNGIGQTH--HKNLVRLLGYCDEG---QNRLLVY  578 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~--~~~-~~~~~~~~~Ei~~l~~l~--h~niv~l~g~~~~~---~~~~lV~  578 (792)
                      +.|+.|.++.||+....   +..+++|+..  ... ......+.+|.++++.++  +..+++++.++.+.   +..++||
T Consensus        44 ~~l~~G~sn~~y~v~~~---~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm  120 (359)
T 3dxp_A           44 EQFKGGQSNPTFKLVTP---GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM  120 (359)
T ss_dssp             EECCC-CCSCEEEEECS---SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred             EEcCCcccceEEEEEEC---CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence            45899999999998653   2468888775  321 123457888999999886  45678899988776   4589999


Q ss_pred             EeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhcc---------------------------------------
Q 003836          579 EFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEEC---------------------------------------  619 (792)
Q Consensus       579 E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~---------------------------------------  619 (792)
                      ||+++..+.+...  ..++...+..++.++++.|+.||...                                       
T Consensus       121 e~v~G~~l~~~~~--~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (359)
T 3dxp_A          121 EFVSGRVLWDQSL--PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMD  198 (359)
T ss_dssp             ECCCCBCCCCTTC--TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHH
T ss_pred             EecCCeecCCCcc--ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHH
Confidence            9999988855221  33677888899999999999999731                                       


Q ss_pred             ----------------CCCeEecCCCCCcEEEcCCCC--eEEeecCCCccc
Q 003836          620 ----------------CTQIIHCDIKPQNILLDDHYN--ARISDFGLAKLL  652 (792)
Q Consensus       620 ----------------~~~ivH~dikp~NILl~~~~~--~kl~Dfg~a~~~  652 (792)
                                      ...++|+|+++.|||++.++.  +.|+||+.+...
T Consensus       199 ~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g  249 (359)
T 3dxp_A          199 SLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG  249 (359)
T ss_dssp             HHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred             HHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence                            247999999999999997753  689999998753

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.68  E-value=4.7e-09  Score=110.87  Aligned_cols=185  Identities=17%  Similarity=0.135  Sum_probs=120.6

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccC-CCC--cccccceeccCC---ceEEEEEe
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH-HKN--LVRLLGYCDEGQ---NRLLVYEF  580 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-h~n--iv~l~g~~~~~~---~~~lV~E~  580 (792)
                      +.++.|....||+..      ..+++|+....  .....+.+|.++++.+. +..  +.+++.......   ..++|||+
T Consensus        26 ~~~~~G~~n~v~~v~------~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~   97 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN------RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTK   97 (304)
T ss_dssp             CEEEECSSEEEEEST------TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEEC
T ss_pred             EecCCCCcceEEEEC------CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcc
Confidence            347889999999863      35888886432  34567899999998873 333  345555544333   34789999


Q ss_pred             ccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhc------------------------------------------
Q 003836          581 MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE------------------------------------------  618 (792)
Q Consensus       581 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~------------------------------------------  618 (792)
                      ++|.+|.+...  ..++..++..++.++++.|+.||+.                                          
T Consensus        98 i~G~~l~~~~~--~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  175 (304)
T 3sg8_A           98 IKGVPLTPLLL--NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD  175 (304)
T ss_dssp             CCCEECCHHHH--HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred             cCCeECCcccc--ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence            99988875332  2456677788888888888888861                                          


Q ss_pred             -------------cCCCeEecCCCCCcEEEcC--CCCeEEeecCCCccccCCCCCcccc-------------ccccCCcc
Q 003836          619 -------------CCTQIIHCDIKPQNILLDD--HYNARISDFGLAKLLTLDQSHTNTA-------------IRGTKGYV  670 (792)
Q Consensus       619 -------------~~~~ivH~dikp~NILl~~--~~~~kl~Dfg~a~~~~~~~~~~~~~-------------~~gt~~y~  670 (792)
                                   ....++|+|++|.|||+++  ...+.|+||+.+.............             .....+..
T Consensus       176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~  255 (304)
T 3sg8_A          176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHK  255 (304)
T ss_dssp             HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCS
T ss_pred             HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCC
Confidence                         0135899999999999998  5568899999987643211000000             00000111


Q ss_pred             c-ccccccCCCCcccceehHHHHHHHHHhcCcCC
Q 003836          671 A-PEWFRNMPITVKVDVYSYGVLLLEIICLRRNI  703 (792)
Q Consensus       671 a-PE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~  703 (792)
                      . |+....  .....+.|+++.++|++.+|..++
T Consensus       256 ~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          256 DIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             CHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             CcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence            1 221111  112368899999999999998765

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.04  E-value=9.5e-06  Score=83.60  Aligned_cols=136  Identities=15%  Similarity=0.127  Sum_probs=95.8

Q ss_pred             hcCccccc-eEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccC-CCCcccccceeccCCceEEEEEeccCCC
Q 003836          508 ELGRGAFG-TVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH-HKNLVRLLGYCDEGQNRLLVYEFMSNGT  585 (792)
Q Consensus       508 ~lG~G~~g-~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~g~~~~~~~~~lV~E~~~~gs  585 (792)
                      .+..|..+ .||+.... ..+..+.+|+-..   .....+.+|...|+.+. +--+.++++++.+++..++|||++++.+
T Consensus        31 ~~~~G~S~~~v~rl~~~-~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~  106 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGK-PNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT  106 (272)
T ss_dssp             EEECSSSSCEEEEEECC-TTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred             EccCCCcCCeEEEEEec-CCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence            34445554 68886433 2345688888643   23457888999888774 4447788899988899999999999987


Q ss_pred             ccccccCCCCCchhHHHHHHHHHHHHHHHHhhcc----------------------------------------------
Q 003836          586 VASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEEC----------------------------------------------  619 (792)
Q Consensus       586 L~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~----------------------------------------------  619 (792)
                      +.+....    .......+..++++.|+-||...                                              
T Consensus       107 ~~~~~~~----~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (272)
T 4gkh_A          107 AFQVLEE----YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKE  182 (272)
T ss_dssp             HHHHHHH----CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHH
T ss_pred             ccccccC----CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHH
Confidence            7665421    12334456666667777776421                                              


Q ss_pred             ---------CCCeEecCCCCCcEEEcCCCCeEEeecCCCcc
Q 003836          620 ---------CTQIIHCDIKPQNILLDDHYNARISDFGLAKL  651 (792)
Q Consensus       620 ---------~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~  651 (792)
                               ...++|+|+++.|||+++++.+-|+||+.+..
T Consensus       183 l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          183 MHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             HHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             HHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence                     02389999999999999887778999998864

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.00  E-value=1.1e-05  Score=84.79  Aligned_cols=135  Identities=17%  Similarity=0.149  Sum_probs=92.8

Q ss_pred             hcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCC---Ccccccceec-cCCceEEEEEeccC
Q 003836          508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHK---NLVRLLGYCD-EGQNRLLVYEFMSN  583 (792)
Q Consensus       508 ~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~---niv~l~g~~~-~~~~~~lV~E~~~~  583 (792)
                      .++.|....||+.      +..+++|+-..  ......+.+|.++|+.+.+.   .+.+++.+.. ..+..++||||++|
T Consensus        26 ~l~~G~~n~v~~v------g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G   97 (306)
T 3tdw_A           26 SLGEGFRNYAILV------NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG   97 (306)
T ss_dssp             EEEECSSEEEEEE------TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred             ecCCCcceeEEEE------CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence            4777888899986      23588888432  23456789999999998653   3566666663 45567899999999


Q ss_pred             CCccccccCCCCCchhHHHHHHHHHHHHHHHHhhc---------------------------------------------
Q 003836          584 GTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE---------------------------------------------  618 (792)
Q Consensus       584 gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~---------------------------------------------  618 (792)
                      .+|.+...  ..++...+..++.++++.|+.||+.                                             
T Consensus        98 ~~l~~~~~--~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~  175 (306)
T 3tdw_A           98 QILGEDGM--AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLR  175 (306)
T ss_dssp             EECHHHHH--TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHH
T ss_pred             eECchhhh--hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHH
Confidence            88876321  1234445555555555555555542                                             


Q ss_pred             ------------cCCCeEecCCCCCcEEEcC---CCC-eEEeecCCCccc
Q 003836          619 ------------CCTQIIHCDIKPQNILLDD---HYN-ARISDFGLAKLL  652 (792)
Q Consensus       619 ------------~~~~ivH~dikp~NILl~~---~~~-~kl~Dfg~a~~~  652 (792)
                                  ....++|+|+++.|||++.   ++. ..|+||+.+...
T Consensus       176 ~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g  225 (306)
T 3tdw_A          176 FQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS  225 (306)
T ss_dssp             HHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred             HHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence                        1235799999999999997   455 489999988653

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=97.94  E-value=1.5e-05  Score=85.75  Aligned_cols=145  Identities=9%  Similarity=0.075  Sum_probs=89.9

Q ss_pred             hhc-CccccceEEEeeec---CC--CceEEEEEEccccc---ccchHHHHHHHHHhcccC-C--CCcccccceeccC---
Q 003836          507 EEL-GRGAFGTVYKGFVN---MG--SSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTH-H--KNLVRLLGYCDEG---  571 (792)
Q Consensus       507 ~~l-G~G~~g~Vy~g~~~---~~--~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~~l~-h--~niv~l~g~~~~~---  571 (792)
                      +.| +.|....+|+....   .+  .++.+++|+-....   ......+.+|+.+++.+. +  ..+.+++.++.+.   
T Consensus        26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~  105 (357)
T 3ats_A           26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL  105 (357)
T ss_dssp             EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred             EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence            346 78888999987543   11  14578888765432   111246788888888884 3  3567788887665   


Q ss_pred             CceEEEEEeccCCCccccccCC------CCCchhHHHHHHHHHHHHH---------------------------------
Q 003836          572 QNRLLVYEFMSNGTVASFLFGD------SKPNWKLRTEIAMGIAGGL---------------------------------  612 (792)
Q Consensus       572 ~~~~lV~E~~~~gsL~~~l~~~------~~l~~~~~~~i~~~ia~gL---------------------------------  612 (792)
                      ...++||||+++..+.+.+...      ..++..++..++.++++.|                                 
T Consensus       106 g~~~~v~e~l~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~La~LH~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  185 (357)
T 3ats_A          106 GTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLTQGRTSDTTLHRHFNWV  185 (357)
T ss_dssp             SSCEEEEECCCCBCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHHHHHHHTTCSSHHHHTGGGC-----CCHHHHHHHHH
T ss_pred             CCceEEEEecCCCChhhcCcccccccccCCCCHHHHHHHHHHHHHHHHHHhCCCCccCChhhccCCCCCCchHHHHHHHH
Confidence            3568999999998876532100      0112222222222222222                                 


Q ss_pred             ---------------------HHHhhc-------cCCCeEecCCCCCcEEEcCCCCeEEeecCCCcc
Q 003836          613 ---------------------FYLHEE-------CCTQIIHCDIKPQNILLDDHYNARISDFGLAKL  651 (792)
Q Consensus       613 ---------------------~yLH~~-------~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~  651 (792)
                                           .+|.+.       ....++|+|+++.|||++++..+.|+||+.+..
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~  252 (357)
T 3ats_A          186 RSWYDFAVEGIGRSPLLERTFEWLQSHWPDDAAAREPVLLWGDARVGNVLYRDFQPVAVLDWEMVAL  252 (357)
T ss_dssp             HHHHHHHHHHHCCCHHHHHHHHHHHHTCCHHHHHSCCEEECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred             HHHHHhhccCCCCChHHHHHHHHHHHhCCCcccCCCceEEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence                                 233221       135799999999999999655578999998864

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=97.58  E-value=9e-05  Score=80.94  Aligned_cols=75  Identities=13%  Similarity=0.165  Sum_probs=47.9

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccc-------cchHHHHHHHHHhcccCC--CC-cccccceeccCCceEE
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ-------DSEKEFKAEVNGIGQTHH--KN-LVRLLGYCDEGQNRLL  576 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~-------~~~~~~~~Ei~~l~~l~h--~n-iv~l~g~~~~~~~~~l  576 (792)
                      +.||.|..+.||++.... .++.++||.......       .....+..|.++++.+.+  +. +.+++.+  +.+..++
T Consensus        36 ~~lg~G~~n~vyrv~~~~-~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l  112 (397)
T 2olc_A           36 QEIGDGNLNYVFHIYDQE-HDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  112 (397)
T ss_dssp             EECCSSSSEEEEEEEC-----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EECCCCceEEEEEEEECC-CCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence            468999999999986542 346799997643211       123456788888887742  33 3455544  3445689


Q ss_pred             EEEeccCC
Q 003836          577 VYEFMSNG  584 (792)
Q Consensus       577 V~E~~~~g  584 (792)
                      |||++++.
T Consensus       113 vmE~l~g~  120 (397)
T 2olc_A          113 VMEDLSHL  120 (397)
T ss_dssp             EECCCTTS
T ss_pred             EEEeCCCc
Confidence            99999864

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=97.53  E-value=0.0006  Score=72.46  Aligned_cols=137  Identities=15%  Similarity=0.150  Sum_probs=79.3

Q ss_pred             hcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCC--CCcccccce------eccCCceEEEEE
Q 003836          508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHH--KNLVRLLGY------CDEGQNRLLVYE  579 (792)
Q Consensus       508 ~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h--~niv~l~g~------~~~~~~~~lV~E  579 (792)
                      .|+.|..+.||+....  + ..+++|+....    ..++..|..+++.+..  -.+.+++..      ....+..++|||
T Consensus        39 ~l~gG~~n~~~~v~~~--~-~~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~  111 (346)
T 2q83_A           39 VIQGNQMALVWKVHTD--S-GAVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD  111 (346)
T ss_dssp             ECC----CEEEEEEET--T-EEEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred             eccccccCcEEEEEeC--C-CCEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence            3666778899997643  2 35889988652    2344556666665532  223444431      124556789999


Q ss_pred             eccCCCccc--------------cccC----C--C--------CCchhHH------------------------------
Q 003836          580 FMSNGTVAS--------------FLFG----D--S--------KPNWKLR------------------------------  601 (792)
Q Consensus       580 ~~~~gsL~~--------------~l~~----~--~--------~l~~~~~------------------------------  601 (792)
                      |+++..+..              .++.    .  .        ...|...                              
T Consensus       112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  191 (346)
T 2q83_A          112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE  191 (346)
T ss_dssp             CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred             eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence            999876531              0111    0  0        0112110                              


Q ss_pred             -HHHHHHHHHHHHHHhh----------ccCCCeEecCCCCCcEEEcCCCCeEEeecCCCcc
Q 003836          602 -TEIAMGIAGGLFYLHE----------ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKL  651 (792)
Q Consensus       602 -~~i~~~ia~gL~yLH~----------~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~  651 (792)
                       ..+...+.+++.+|+.          .....++|+|+++.|||++.++.+.|+||+.+..
T Consensus       192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~  252 (346)
T 2q83_A          192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF  252 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred             HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence             0111223446667763          1246899999999999998888999999998753

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.42  E-value=0.00046  Score=72.34  Aligned_cols=74  Identities=18%  Similarity=0.187  Sum_probs=57.8

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccC---CCCcccccceeccCCceEEEEEeccC
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH---HKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~---h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      +.|+.|....+|+...   ++..+++|+....   ....+..|.+.|+.+.   ...+++++.++...+..++||||+++
T Consensus        42 ~~l~gG~~n~~y~v~~---~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G  115 (312)
T 3jr1_A           42 EKLYSGEMNEIWLIND---EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK  115 (312)
T ss_dssp             EEECCSSSSEEEEEES---SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred             EEeCCccceeeeEEEE---CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence            3588999999999753   2457888886532   3567889999888884   35688888888877889999999999


Q ss_pred             CCc
Q 003836          584 GTV  586 (792)
Q Consensus       584 gsL  586 (792)
                      ..+
T Consensus       116 ~~~  118 (312)
T 3jr1_A          116 SKN  118 (312)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            875

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=97.20  E-value=0.00076  Score=69.92  Aligned_cols=74  Identities=19%  Similarity=0.232  Sum_probs=52.3

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCC---CcccccceeccCCceEEEEEeccC
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHK---NLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~---niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      +.+|.|..+.||+..+.  +++.+.+|+-..........|..|.+.|+.+...   -+++++++.    ..++||||++.
T Consensus        21 ~~~g~G~~~~vyrv~l~--DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~   94 (288)
T 3f7w_A           21 AERGHSHRWHLYRVELA--DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE   94 (288)
T ss_dssp             EEEEEETTEEEEEEEET--TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred             EecCCCCCeEEEEEEEC--CCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeecc
Confidence            45899999999998765  3568999987654444455788999988877422   244455442    34789999987


Q ss_pred             CCc
Q 003836          584 GTV  586 (792)
Q Consensus       584 gsL  586 (792)
                      +..
T Consensus        95 ~~~   97 (288)
T 3f7w_A           95 RPP   97 (288)
T ss_dssp             CCC
T ss_pred             cCC
Confidence            654

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=97.14  E-value=0.00066  Score=74.60  Aligned_cols=80  Identities=9%  Similarity=0.012  Sum_probs=49.4

Q ss_pred             CCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccccccccCCcccccccccC---CCCcccceehHHHHHHHH
Q 003836          620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM---PITVKVDVYSYGVLLLEI  696 (792)
Q Consensus       620 ~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~k~DV~S~Gv~l~el  696 (792)
                      ...++|+|++|.|||++.++ ++|+||+.+...............-...|.+|+.....   .-....++.+....+|+.
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL  309 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence            35899999999999999876 99999999875432111000000001245666654311   112235566888888888


Q ss_pred             HhcC
Q 003836          697 ICLR  700 (792)
Q Consensus       697 ~tg~  700 (792)
                      ++++
T Consensus       310 y~~~  313 (420)
T 2pyw_A          310 FNKR  313 (420)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7764

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=96.80  E-value=0.0019  Score=71.04  Aligned_cols=75  Identities=13%  Similarity=0.162  Sum_probs=50.2

Q ss_pred             hhcCccccceEEEeeecCC------CceEEEEEEcccccccchHHHHHHHHHhcccCCCCc-ccccceeccCCceEEEEE
Q 003836          507 EELGRGAFGTVYKGFVNMG------SSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL-VRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~------~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~ni-v~l~g~~~~~~~~~lV~E  579 (792)
                      +.|+.|....+|+.....+      .++.+++|+....  .....+.+|..+++.+...++ .++++.+.+    .+|+|
T Consensus        79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e  152 (429)
T 1nw1_A           79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE  152 (429)
T ss_dssp             EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred             EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence            3577888899999875421      2357888887432  122456689999988854444 567776653    38999


Q ss_pred             eccCCCcc
Q 003836          580 FMSNGTVA  587 (792)
Q Consensus       580 ~~~~gsL~  587 (792)
                      |+++.+|.
T Consensus       153 ~l~G~~l~  160 (429)
T 1nw1_A          153 YIPSRPLS  160 (429)
T ss_dssp             CCCEEECC
T ss_pred             EeCCcccC
Confidence            99875553

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=96.78  E-value=0.0027  Score=66.76  Aligned_cols=139  Identities=12%  Similarity=0.086  Sum_probs=78.5

Q ss_pred             hcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCC--ccccccee------ccCCceEEEEE
Q 003836          508 ELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKN--LVRLLGYC------DEGQNRLLVYE  579 (792)
Q Consensus       508 ~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~n--iv~l~g~~------~~~~~~~lV~E  579 (792)
                      .|+.|....+|+.....  + .+++|+....  .....+..|+.+++.+...+  +.+++...      ...+..+++++
T Consensus        29 ~i~~G~~n~~~~v~~~~--g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~  103 (322)
T 2ppq_A           29 GIAEGVENSNFLLHTTK--D-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALIS  103 (322)
T ss_dssp             EECC---EEEEEEEESS--C-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEE
T ss_pred             ccCCCcccceEEEEeCC--c-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEE
Confidence            46778888999976542  2 5888887652  12345667777777764323  33444221      12345689999


Q ss_pred             eccCCCcccc--------------ccC------CCC------CchhHHHH------------HHHHHHHHHHHHhhc---
Q 003836          580 FMSNGTVASF--------------LFG------DSK------PNWKLRTE------------IAMGIAGGLFYLHEE---  618 (792)
Q Consensus       580 ~~~~gsL~~~--------------l~~------~~~------l~~~~~~~------------i~~~ia~gL~yLH~~---  618 (792)
                      |+++..+...              ++.      ...      ..|.....            +...+.+.++.++..   
T Consensus       104 ~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~  183 (322)
T 2ppq_A          104 FLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPK  183 (322)
T ss_dssp             CCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCC
T ss_pred             eCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcc
Confidence            9998765321              111      000      01221100            011234445555532   


Q ss_pred             -cCCCeEecCCCCCcEEEcCCCCeEEeecCCCcc
Q 003836          619 -CCTQIIHCDIKPQNILLDDHYNARISDFGLAKL  651 (792)
Q Consensus       619 -~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~  651 (792)
                       ....++|+|+++.|||++++..+.|+||+.+..
T Consensus       184 ~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~  217 (322)
T 2ppq_A          184 DLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN  217 (322)
T ss_dssp             SSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             cCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence             134799999999999999876668999998753

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=96.71  E-value=0.0046  Score=66.52  Aligned_cols=139  Identities=15%  Similarity=0.176  Sum_probs=82.0

Q ss_pred             hcCccccceEEEeeecC------CCceEEEEEEcccccccchHHHHHHHHHhcccCCCC-cccccceeccCCceEEEEEe
Q 003836          508 ELGRGAFGTVYKGFVNM------GSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKN-LVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       508 ~lG~G~~g~Vy~g~~~~------~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~n-iv~l~g~~~~~~~~~lV~E~  580 (792)
                      .|..|-...+|+.....      +.++.+.+|+-... ........+|.++++.+...+ ..++++++.++    +||||
T Consensus        57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~g----~v~e~  131 (379)
T 3feg_A           57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPEG----RLEQY  131 (379)
T ss_dssp             EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETTE----EEEEC
T ss_pred             EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCCc----cEEEE
Confidence            46667778899876532      12357888886332 223456778999998885333 35677766542    99999


Q ss_pred             ccCCCcccc-c----------------cCC-----CCC--chhHHHHHHHHHHH-------------------HHHHHhh
Q 003836          581 MSNGTVASF-L----------------FGD-----SKP--NWKLRTEIAMGIAG-------------------GLFYLHE  617 (792)
Q Consensus       581 ~~~gsL~~~-l----------------~~~-----~~l--~~~~~~~i~~~ia~-------------------gL~yLH~  617 (792)
                      +++..|..- +                +.-     +..  -+.++.++..++..                   .+..|..
T Consensus       132 i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~  211 (379)
T 3feg_A          132 IPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRK  211 (379)
T ss_dssp             CSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHH
T ss_pred             ecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHH
Confidence            998766421 1                110     111  13344444433321                   2233322


Q ss_pred             c-----cCCCeEecCCCCCcEEEcCC----CCeEEeecCCCcc
Q 003836          618 E-----CCTQIIHCDIKPQNILLDDH----YNARISDFGLAKL  651 (792)
Q Consensus       618 ~-----~~~~ivH~dikp~NILl~~~----~~~kl~Dfg~a~~  651 (792)
                      .     ....++|+|+.+.|||++.+    +.+.|+||..+..
T Consensus       212 ~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          212 LLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             HHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             HHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence            1     12369999999999999876    7899999998864

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=96.71  E-value=0.0019  Score=67.29  Aligned_cols=127  Identities=15%  Similarity=0.145  Sum_probs=73.9

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCc-ccccceeccCCceEEEEEec-cCC
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL-VRLLGYCDEGQNRLLVYEFM-SNG  584 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~ni-v~l~g~~~~~~~~~lV~E~~-~~g  584 (792)
                      +.|+.|....+|+.       ..+++|+....... .....+|..+++.+...++ .++++++  .+.-++|+||+ ++.
T Consensus        24 ~~l~gG~tN~~~~~-------~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~   93 (301)
T 3dxq_A           24 LERLGGLTNLVFRA-------GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQ   93 (301)
T ss_dssp             EEEESCSSEEEEEE-------TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCE
T ss_pred             eEcCCcccccccee-------eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCc
Confidence            45788888999987       24888887543211 1223568877777753333 4555543  33457899999 665


Q ss_pred             CccccccCCCCCchhHHHHHHHHHHHHHHHHhh-----------------------------------------------
Q 003836          585 TVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE-----------------------------------------------  617 (792)
Q Consensus       585 sL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~-----------------------------------------------  617 (792)
                      +|......       .+..++.++++.|+-||.                                               
T Consensus        94 ~l~~~~~~-------~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l  166 (301)
T 3dxq_A           94 TMSPEKFK-------TRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSAL  166 (301)
T ss_dssp             ECCHHHHH-------HSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHH
T ss_pred             cCCHhhHh-------hhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHH
Confidence            55321000       000112222222222222                                               


Q ss_pred             ---ccCCCeEecCCCCCcEEEcCCCCeEEeecCCCcc
Q 003836          618 ---ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKL  651 (792)
Q Consensus       618 ---~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~  651 (792)
                         .....++|+|+.+.||| ..++.+.|+||..+..
T Consensus       167 ~~~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~  202 (301)
T 3dxq_A          167 AAHPLPLAACHCDPLCENFL-DTGERMWIVDWEYSGM  202 (301)
T ss_dssp             HSSCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             HhcCCCceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence               11235899999999999 5667789999998864

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=96.52  E-value=0.0075  Score=66.63  Aligned_cols=75  Identities=11%  Similarity=0.021  Sum_probs=47.0

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCc-ccccceeccCCceEEEEEeccCCC
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL-VRLLGYCDEGQNRLLVYEFMSNGT  585 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~ni-v~l~g~~~~~~~~~lV~E~~~~gs  585 (792)
                      +.|+.|-...+|+..... .+..+++|+...... ..-...+|..+++.+...++ .++++.+..    .+||||+++.+
T Consensus       114 ~~lsgG~tN~~y~v~~~~-~~~~~vLRi~g~~~~-~~idR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G~~  187 (458)
T 2qg7_A          114 QIINGGITNILIKVKDMS-KQAKYLIRLYGPKTD-EIINREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDGYA  187 (458)
T ss_dssp             EEECC--CEEEEEEEETT-TTEEEEEEEECC-CC-SCSCHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCSEE
T ss_pred             EEcCCCeEeEEEEEEECC-CCceEEEEECCCChh-hhcCHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCCcc
Confidence            357888889999986542 235788887643221 11123688888888865555 567777632    25999999866


Q ss_pred             cc
Q 003836          586 VA  587 (792)
Q Consensus       586 L~  587 (792)
                      |.
T Consensus       188 l~  189 (458)
T 2qg7_A          188 LS  189 (458)
T ss_dssp             CC
T ss_pred             CC
Confidence            54

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=96.29  E-value=0.0071  Score=64.98  Aligned_cols=74  Identities=8%  Similarity=0.043  Sum_probs=43.3

Q ss_pred             hcCccccceEEEeeecCC-------CceEEEEEEcccccccchHHHHHHHHHhcccCCCCc-ccccceeccCCceEEEEE
Q 003836          508 ELGRGAFGTVYKGFVNMG-------SSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL-VRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       508 ~lG~G~~g~Vy~g~~~~~-------~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~ni-v~l~g~~~~~~~~~lV~E  579 (792)
                      .|+.|....+|+.....+       .++.+++|+...... .......|.++++.+...++ .++++...    -++|||
T Consensus        40 ~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~~----~~~v~e  114 (369)
T 3c5i_A           40 QILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTFN----GGRIEE  114 (369)
T ss_dssp             EC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEEE
T ss_pred             EeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEecC----CcEEEE
Confidence            477788889999865421       125788888654321 11234678888887754443 46665542    368999


Q ss_pred             eccCCCc
Q 003836          580 FMSNGTV  586 (792)
Q Consensus       580 ~~~~gsL  586 (792)
                      |+++..+
T Consensus       115 ~i~G~~l  121 (369)
T 3c5i_A          115 WLYGDPL  121 (369)
T ss_dssp             CCCSEEC
T ss_pred             EecCCcC
Confidence            9998655

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=96.22  E-value=0.024  Score=59.48  Aligned_cols=137  Identities=11%  Similarity=0.044  Sum_probs=78.2

Q ss_pred             cCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCC--cccccce-----eccCCceEEEEEec
Q 003836          509 LGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKN--LVRLLGY-----CDEGQNRLLVYEFM  581 (792)
Q Consensus       509 lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~n--iv~l~g~-----~~~~~~~~lV~E~~  581 (792)
                      ++ |....||+....  +++.+++|+.... ......+..|..+++.+....  +++++..     ....+..++||||+
T Consensus        34 l~-g~~n~~y~v~~~--~g~~~vlK~~~~~-~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i  109 (328)
T 1zyl_A           34 LN-SYENRVYQFQDE--DRRRFVVKFYRPE-RWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV  109 (328)
T ss_dssp             EC-CSSSEEEEECCT--TCCCEEEEEECTT-TSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred             ec-CcccceEEEEcC--CCCEEEEEEcCCC-CCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence            55 777889987543  3456899997632 123456777888888774322  4445543     11234567899999


Q ss_pred             cCCCccc----c----------ccC----C-----CCCchhHH----HHH---------------HHHHHHHHHHHhhc-
Q 003836          582 SNGTVAS----F----------LFG----D-----SKPNWKLR----TEI---------------AMGIAGGLFYLHEE-  618 (792)
Q Consensus       582 ~~gsL~~----~----------l~~----~-----~~l~~~~~----~~i---------------~~~ia~gL~yLH~~-  618 (792)
                      ++..+..    .          ++.    .     ...++...    ..+               ...+.+.++.+... 
T Consensus       110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  189 (328)
T 1zyl_A          110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW  189 (328)
T ss_dssp             CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            9866531    0          110    0     01111100    000               11111222333221 


Q ss_pred             ---cCCCeEecCCCCCcEEEcCCCCeEEeecCCCcc
Q 003836          619 ---CCTQIIHCDIKPQNILLDDHYNARISDFGLAKL  651 (792)
Q Consensus       619 ---~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~  651 (792)
                         ....++|+|+++.|||++ + .+.|+||+.+..
T Consensus       190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence               234689999999999999 4 899999988764

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=95.92  E-value=0.019  Score=60.49  Aligned_cols=33  Identities=30%  Similarity=0.283  Sum_probs=28.3

Q ss_pred             CCCeEecCCCCCcEEEcCC----CCeEEeecCCCccc
Q 003836          620 CTQIIHCDIKPQNILLDDH----YNARISDFGLAKLL  652 (792)
Q Consensus       620 ~~~ivH~dikp~NILl~~~----~~~kl~Dfg~a~~~  652 (792)
                      ...++|+|+++.|||++.+    ..+.|+||+.+...
T Consensus       182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence            3479999999999999875    67999999988753

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=95.28  E-value=0.14  Score=54.02  Aligned_cols=31  Identities=26%  Similarity=0.374  Sum_probs=27.9

Q ss_pred             CCeEecCCCCCcEEEcCCCCeEEeecCCCcc
Q 003836          621 TQIIHCDIKPQNILLDDHYNARISDFGLAKL  651 (792)
Q Consensus       621 ~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~  651 (792)
                      ..++|+|+.+.||++++++.+.|+||+.+..
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            4799999999999999888899999987764

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=95.17  E-value=0.025  Score=54.82  Aligned_cols=103  Identities=12%  Similarity=-0.030  Sum_probs=66.6

Q ss_pred             CCccccccC-CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          584 GTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       584 gsL~~~l~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      -||.+.|.. +.++++.+.+.++.|.+++|.-+-.+.  .-..+=+.|..|+|..+|.+.+.+ ..+.            
T Consensus        33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~--~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------   97 (229)
T 2yle_A           33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRR--QPRHRVRSAAQIRVWRDGAVTLAP-AADD------------   97 (229)
T ss_dssp             EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred             ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcc--cCCceecCCcceEEecCCceeccc-cccc------------
Confidence            378888865 478999999999999999987762210  111223446899999999988874 1111            


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCC
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNI  703 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~  703 (792)
                       .....+.|||... ...+.+.=|||+|++||.-+--..|-
T Consensus        98 -~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e  136 (229)
T 2yle_A           98 -AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKE  136 (229)
T ss_dssp             ----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred             -ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCc
Confidence             0123467888763 35567889999999999988655443

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=93.70  E-value=0.11  Score=56.65  Aligned_cols=75  Identities=9%  Similarity=0.078  Sum_probs=46.7

Q ss_pred             hcCccccceEEEeeecCCC------ceEEEEEEcccccccchHHHHHHHHHhcccCCCCc-ccccceeccCCceEEEEEe
Q 003836          508 ELGRGAFGTVYKGFVNMGS------SNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL-VRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       508 ~lG~G~~g~Vy~g~~~~~~------~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~ni-v~l~g~~~~~~~~~lV~E~  580 (792)
                      .+..|-...+|+.....+.      ++.+++|+..... ...-...+|.++++.+...++ .++++.+.    -++||||
T Consensus        77 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~ef  151 (424)
T 3mes_A           77 QIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIEEF  151 (424)
T ss_dssp             EECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEEEC
T ss_pred             EcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEEEE
Confidence            4667777889988664211      3578888864432 222234678888887753333 45555432    2789999


Q ss_pred             ccCCCcc
Q 003836          581 MSNGTVA  587 (792)
Q Consensus       581 ~~~gsL~  587 (792)
                      +++..|.
T Consensus       152 I~G~~l~  158 (424)
T 3mes_A          152 IDGEPLT  158 (424)
T ss_dssp             CCSEECC
T ss_pred             eCCccCC
Confidence            9987653

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=90.23  E-value=8.5  Score=38.65  Aligned_cols=72  Identities=21%  Similarity=0.342  Sum_probs=45.3

Q ss_pred             EEEEEeecCCCCcEEEEecCCCC-------CCCCeeEEEEeCccEEEEcCCCCEEEEeccCC-CcceeEEEecCCcEEEE
Q 003836           62 LPAIWYYKIPSKTIVWYASAVNP-------APRGSKLRLTANRGLVLEDPEGREIWKSEIST-GQAAFGVLYDTGNFLIV  133 (792)
Q Consensus        62 ~~gIW~~~~~~~tvvWvANr~~P-------~~~~~~l~~~~~G~Lvl~~~~~~~vWst~~~~-~~~~~a~LldsGNlVl~  133 (792)
                      .+.||  +....+++|...+..+       +.....+.++.++.+..+|++|+.+|.-.... .....++.+.+||+++-
T Consensus        16 ~v~~~--d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs~~~~V~~~d~~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~   93 (276)
T 3no2_A           16 KIAII--NKDTKEIVWEYPLEKGWECNSVAATKAGEILFSYSKGAKMITRDGRELWNIAAPAGCEMQTARILPDGNALVA   93 (276)
T ss_dssp             EEEEE--ETTTTEEEEEEECCTTCCCCEEEECTTSCEEEECBSEEEEECTTSCEEEEEECCTTCEEEEEEECTTSCEEEE
T ss_pred             EEEEE--ECCCCeEEEEeCCCccCCCcCeEECCCCCEEEeCCCCEEEECCCCCEEEEEcCCCCccccccEECCCCCEEEE
Confidence            34455  3346778899887652       11122344455666777788999999987642 23345677788888776


Q ss_pred             ec
Q 003836          134 NT  135 (792)
Q Consensus       134 ~~  135 (792)
                      +.
T Consensus        94 ~~   95 (276)
T 3no2_A           94 WC   95 (276)
T ss_dssp             EE
T ss_pred             ec
Confidence            53

>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}

Probab=87.88  E-value=0.91  Score=43.86  Aligned_cols=117  Identities=10%  Similarity=0.100  Sum_probs=77.7

Q ss_pred             CCCCcccccceeccCCceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEc
Q 003836          557 HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLD  636 (792)
Q Consensus       557 ~h~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~  636 (792)
                      .||+++.. .+-.+.+.+.+.|+.-+  +...|-. -+..+...+++++..|+....+++..     +|--|+|+||+++
T Consensus        43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~~-ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL~f~  113 (215)
T 4ann_A           43 HSPYFIDA-ELTELRDSFQIHYDIND--NHTPFDN-IKSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDELFFT  113 (215)
T ss_dssp             CCTTBCCE-EEEECSSEEEEEECCCT--TSEEGGG-GGGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGEEEC
T ss_pred             cCCcccce-EEEEcccEEEEEEEcCc--ccCCHHH-HHhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceEEEc
Confidence            57888866 45555565555555433  2333221 24567889999999999988777654     7889999999999


Q ss_pred             CCCCeEEeecCCCccccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCc
Q 003836          637 DHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDN  705 (792)
Q Consensus       637 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~  705 (792)
                      .++.+++.=.|+...+                  +|.     ..+...=.-.+=+++..+++++..|+.
T Consensus       114 ~~~~p~i~~RGik~~l------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe~  159 (215)
T 4ann_A          114 RDGLPIAKTRGLQNVV------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFDA  159 (215)
T ss_dssp             TTSCEEESCCEETTTB------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHHH
T ss_pred             CCCCEEEEEccCccCC------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence            9999999877664332                  221     111122233566788888888877754

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=87.44  E-value=2.5  Score=42.76  Aligned_cols=63  Identities=16%  Similarity=0.147  Sum_probs=33.0

Q ss_pred             CCcEEEEecCCC-CC-----CCCeeEEEEeC-ccEEEEcCC-CCEEEEeccCC-C-----cceeEEEecCCcEEEEe
Q 003836           72 SKTIVWYASAVN-PA-----PRGSKLRLTAN-RGLVLEDPE-GREIWKSEIST-G-----QAAFGVLYDTGNFLIVN  134 (792)
Q Consensus        72 ~~tvvWvANr~~-P~-----~~~~~l~~~~~-G~Lvl~~~~-~~~vWst~~~~-~-----~~~~a~LldsGNlVl~~  134 (792)
                      ...++|...+.. |.     .++..+....+ +.++.+|++ |+++|+..... .     ....++++.+||+++.+
T Consensus       154 ~G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~  230 (276)
T 3no2_A          154 NGQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN  230 (276)
T ss_dssp             TSCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred             CCCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence            366777776543 31     11222222222 346666766 77777765321 1     13456667777777765

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=86.82  E-value=0.63  Score=50.20  Aligned_cols=30  Identities=27%  Similarity=0.391  Sum_probs=25.2

Q ss_pred             CeEecCCCCCcEEE------cCCCCeEEeecCCCcc
Q 003836          622 QIIHCDIKPQNILL------DDHYNARISDFGLAKL  651 (792)
Q Consensus       622 ~ivH~dikp~NILl------~~~~~~kl~Dfg~a~~  651 (792)
                      .++|+|+.+.|||+      +++..++++||..|..
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            36799999999999      4567799999998864

>2ll3_A Micronemal protein 4; cell adhesion; NMR {Toxoplasma gondii} PDB: 2ll4_M*

Probab=85.28  E-value=0.33  Score=38.89  Aligned_cols=32  Identities=22%  Similarity=0.512  Sum_probs=27.5

Q ss_pred             cCChhhHhhhccCCCccccceec--cCceeeccc
Q 003836          377 PYGKDECVSSCLKDCQCSAAVLR--DDTCWKKKL  408 (792)
Q Consensus       377 ~~s~~~C~~~Cl~nCsC~A~~~~--~~~C~~~~~  408 (792)
                      .+++++|++.|+.+=.|.||.|+  ...|++|..
T Consensus        29 ~~sl~~Cq~aC~a~~~C~aFTyN~~s~~CflKs~   62 (82)
T 2ll3_A           29 ASSLSECRARCQAEKECSHYTYNVKSGLCYPKRG   62 (82)
T ss_dssp             CSSHHHHHHHHHHCTTEEEEEEETTTTEEEEEES
T ss_pred             CCCHHHHHHHhhccCCCCeEEeccCCCceEcccC
Confidence            46899999999999999999997  456988754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	792
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-63
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-62
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-62
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	7e-61
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-60
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	9e-60
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	4e-59
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	3e-58
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	9e-58
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-57
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-56
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-56
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-56
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-56
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	3e-56
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	4e-56
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	5e-56
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-55
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-53
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	4e-53
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	8e-53
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-52
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	4e-52
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	9e-52
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-51
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-51
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-51
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	5e-51
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	5e-49
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-47
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	3e-47
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	3e-47
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-45
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-44
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-44
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-42
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	7e-42
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	3e-41
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	4e-41
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	4e-41
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	4e-41
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	9e-41
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	4e-40
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	4e-39
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	1e-38
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	3e-38
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	8e-38
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	9e-38
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-37
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	3e-37
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	3e-37
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	4e-37
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-35
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	5e-35
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	7e-35
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	7e-33
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	9e-32
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-31
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	4e-30
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	6e-30
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-27
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	6e-24
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	7e-18
d1kj1a_	109	b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium	6e-11
d1kj1a_	109	b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium	2e-05
d1dlpa2	120	b.78.1.1 (A:116-235) Fetuin-binding protein Scafet	2e-10
d1xd5a_	112	b.78.1.1 (A:) Gastrodianin (antifungal protein) {G	7e-09
d1xd5a_	112	b.78.1.1 (A:) Gastrodianin (antifungal protein) {G	8e-09
d1b2pa_	119	b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scill	5e-08
d1dlpa1	115	b.78.1.1 (A:1-115) Fetuin-binding protein Scafet p	1e-07
d1jpca_	108	b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan	4e-06
d1jpca_	108	b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galan	1e-05

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  211 bits (539), Expect = 2e-63
 Identities = 75/285 (26%), Positives = 127/285 (44%), Gaps = 30/285 (10%)

Query: 500 EVTRG---FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE--KEFKAEVNGIG 554
           E+  G     + +G G+FGTVYKG  +      VAVK LN      +  + FK EV  + 
Sbjct: 4   EIPDGQITVGQRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPTPQQLQAFKNEVGVLR 59

Query: 555 QTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFG-DSKPNWKLRTEIAMGIAGGLF 613
           +T H N++  +GY    Q   +V ++    ++   L   ++K       +IA   A G+ 
Sbjct: 60  KTRHVNILLFMGYSTAPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMD 118

Query: 614 YLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT-LDQSHTNTAIRGTKGYVAP 672
           YLH +    IIH D+K  NI L +    +I DFGLA + +    SH    + G+  ++AP
Sbjct: 119 YLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 175

Query: 673 EWFRNM---PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLE 729
           E  R     P + + DVY++G++L E++  +    N     ++  +       Y    L 
Sbjct: 176 EVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN---NRDQIIFMVGRGYLSPDLS 232

Query: 730 ALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
            +  N  +AM           +   C+++    RP   ++   +E
Sbjct: 233 KVRSNCPKAMKR---------LMAECLKKKRDERPLFPQILASIE 268

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  210 bits (535), Expect = 1e-62
 Identities = 73/307 (23%), Positives = 131/307 (42%), Gaps = 38/307 (12%)

Query: 493 FTYKELVEVTRGFKEE-----------LGRGAFGTVYKGFVNMGSSNH--VAVKKLNSVF 539
           FT+++  E  R F +E           +G G FG V  G + +       VA+K L S +
Sbjct: 7   FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66

Query: 540 -QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP-N 597
            +   ++F +E + +GQ  H N++ L G   +    +++ EFM NG++ SFL  +     
Sbjct: 67  TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 126

Query: 598 WKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS 657
                 +  GIA G+ YL +      +H D+  +NIL++ +   ++SDFGL++ L  D S
Sbjct: 127 VIQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 183

Query: 658 HTNT----AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKA 713
                     +    + APE  +    T   DV+SYG+++ E++                
Sbjct: 184 DPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE------------ 231

Query: 714 ILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQML 773
                 Y     + +   +E D      +        +   C Q+D +HRP   ++   L
Sbjct: 232 ----RPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL 287

Query: 774 EGVVEVP 780
           + ++  P
Sbjct: 288 DKMIRNP 294

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  208 bits (531), Expect = 2e-62
 Identities = 74/272 (27%), Positives = 116/272 (42%), Gaps = 25/272 (9%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
             E LG G FG V+ G+ N      VAVK L      S   F AE N + Q  H+ LVRL
Sbjct: 17  LVERLGAGQFGEVWMGYYNGH--TKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRL 73

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLF--GDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
                +     ++ E+M NG++  FL      K       ++A  IA G+ ++ E     
Sbjct: 74  YAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--- 129

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH D++  NIL+ D  + +I+DFGLA+L+  ++       +    + APE       T+
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI 189

Query: 683 KVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV 742
           K DV+S+G+LL EI+   R     ++  +                +   +E     +   
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPE----------------VIQNLERGYRMVRPD 233

Query: 743 TMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
                   +   C +E P  RPT   +  +LE
Sbjct: 234 NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  204 bits (519), Expect = 7e-61
 Identities = 61/271 (22%), Positives = 111/271 (40%), Gaps = 23/271 (8%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           F +ELG G FG V  G         VA+K +      SE EF  E   +    H+ LV+L
Sbjct: 8   FLKELGTGQFGVVKYGKWR--GQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQL 64

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP-NWKLRTEIAMGIAGGLFYLHEECCTQI 623
            G C + +   ++ E+M+NG + ++L         +   E+   +   + YL      Q 
Sbjct: 65  YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQF 121

Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVK 683
           +H D+  +N L++D    ++SDFGL++ +  D+  ++   +    +  PE       + K
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSK 181

Query: 684 VDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVT 743
            D++++GVL+ EI  L +                  Y+R+        +   L       
Sbjct: 182 SDIWAFGVLMWEIYSLGK----------------MPYERFTNSETAEHIAQGLRLYRPHL 225

Query: 744 MLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
              +   + + C  E    RPT + +   + 
Sbjct: 226 ASEKVYTIMYSCWHEKADERPTFKILLSNIL 256

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  202 bits (516), Expect = 2e-60
 Identities = 65/275 (23%), Positives = 118/275 (42%), Gaps = 23/275 (8%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
           F +E+G G FG V+ G+      + VA+K +      SE++F  E   + +  H  LV+L
Sbjct: 9   FVQEIGSGQFGLVHLGYWLNK--DKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQL 65

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP-NWKLRTEIAMGIAGGLFYLHEECCTQI 623
            G C E     LV+EFM +G ++ +L         +    + + +  G+ YL E C   +
Sbjct: 66  YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---V 122

Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVK 683
           IH D+  +N L+ ++   ++SDFG+ + +  DQ  ++T  +    + +PE F     + K
Sbjct: 123 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 182

Query: 684 VDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVT 743
            DV+S+GVL+ E+    +      S  +                +   +           
Sbjct: 183 SDVWSFGVLMWEVFSEGKIPYENRSNSE----------------VVEDISTGFRLYKPRL 226

Query: 744 MLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
                  +   C +E P  RP   ++ + L  + E
Sbjct: 227 ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE 261

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  202 bits (514), Expect = 9e-60
 Identities = 67/281 (23%), Positives = 115/281 (40%), Gaps = 25/281 (8%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            + +LG+G FG V+ G  N   +  VA+K L        + F  E   + +  H+ LV+L
Sbjct: 21  LEVKLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMS-PEAFLQEAQVMKKLRHEKLVQL 77

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP--NWKLRTEIAMGIAGGLFYLHEECCTQ 622
                  +   +V E+MS G++  FL G++          ++A  IA G+ Y+       
Sbjct: 78  YAVV-SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMN 133

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            +H D++  NIL+ ++   +++DFGLA+L+  ++       +    + APE       T+
Sbjct: 134 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 193

Query: 683 KVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV 742
           K DV+S+G+LL E+    R                  Y     R +   VE         
Sbjct: 194 KSDVWSFGILLTELTTKGRVP----------------YPGMVNREVLDQVERGYRMPCPP 237

Query: 743 TMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPIPP 783
                   +   C +++P  RPT   +   LE       P 
Sbjct: 238 ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ 278

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  199 bits (508), Expect = 4e-59
 Identities = 73/272 (26%), Positives = 114/272 (41%), Gaps = 25/272 (9%)

Query: 508 ELGRGAFGTVYKGFVNMGSSN-HVAVKKLNSVFQDSE--KEFKAEVNGIGQTHHKNLVRL 564
           ELG G FGTV KG+  M      VAVK L +   D     E  AE N + Q  +  +VR+
Sbjct: 14  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
           +G C E ++ +LV E    G +  +L  +     K   E+   ++ G+ YL     +  +
Sbjct: 74  IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE---ESNFV 129

Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH--TNTAIRGTKGYVAPEWFRNMPITV 682
           H D+  +N+LL   + A+ISDFGL+K L  D+++    T  +    + APE       + 
Sbjct: 130 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 189

Query: 683 KVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV 742
           K DV+S+GVL+ E     +                  Y   +   + A++E         
Sbjct: 190 KSDVWSFGVLMWEAFSYGQ----------------KPYRGMKGSEVTAMLEKGERMGCPA 233

Query: 743 TMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
                   +   C   D  +RP    V   L 
Sbjct: 234 GCPREMYDLMNLCWTYDVENRPGFAAVELRLR 265

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  197 bits (502), Expect = 3e-58
 Identities = 67/272 (24%), Positives = 109/272 (40%), Gaps = 25/272 (9%)

Query: 508 ELGRGAFGTVYKGFVNMGSSN-HVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
           ELG G FG+V +G   M      VA+K L     +   +E   E   + Q  +  +VRL+
Sbjct: 16  ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 75

Query: 566 GYCDEGQNRLLVYEFMSNGTVASFLFGDSKP-NWKLRTEIAMGIAGGLFYLHEECCTQII 624
           G C + +  +LV E    G +  FL G  +        E+   ++ G+ YL        +
Sbjct: 76  GVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFV 131

Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH--TNTAIRGTKGYVAPEWFRNMPITV 682
           H D+  +N+LL + + A+ISDFGL+K L  D S+    +A +    + APE       + 
Sbjct: 132 HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 191

Query: 683 KVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV 742
           + DV+SYGV + E +   +                  Y + +   + A +E         
Sbjct: 192 RSDVWSYGVTMWEALSYGQ----------------KPYKKMKGPEVMAFIEQGKRMECPP 235

Query: 743 TMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
                   +   C       RP    V Q + 
Sbjct: 236 ECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 267

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  196 bits (500), Expect = 9e-58
 Identities = 72/276 (26%), Positives = 122/276 (44%), Gaps = 23/276 (8%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            K +LG G +G VY+G V    S  VAVK L     + E EF  E   + +  H NLV+L
Sbjct: 21  MKHKLGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQL 78

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLF--GDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ 622
           LG C       ++ EFM+ G +  +L      + +  +   +A  I+  + YL ++    
Sbjct: 79  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--- 135

Query: 623 IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITV 682
            IH D+  +N L+ +++  +++DFGL++L+T D    +   +    + APE       ++
Sbjct: 136 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSI 195

Query: 683 KVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV 742
           K DV+++GVLL EI                       Y       +  L+E D       
Sbjct: 196 KSDVWAFGVLLWEIATYGM----------------SPYPGIDLSQVYELLEKDYRMERPE 239

Query: 743 TMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
               +   +   C Q +PS RP+  ++ Q  E + +
Sbjct: 240 GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 275

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  196 bits (500), Expect = 2e-57
 Identities = 52/294 (17%), Positives = 113/294 (38%), Gaps = 33/294 (11%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVR 563
              ELG G  G V+K   +  S   +A K ++  +      +   E+  + + +   +V 
Sbjct: 10  KISELGAGNGGVVFKV-SHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVG 68

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
             G         +  E M  G++   L    +   ++  ++++ +  GL YL E+   +I
Sbjct: 69  FYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KI 126

Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVK 683
           +H D+KP NIL++     ++ DFG++  L    +++     GT+ Y++PE  +    +V+
Sbjct: 127 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSVQ 183

Query: 684 VDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVT 743
            D++S G+ L+E+   R  I    +K  + +          E            +   + 
Sbjct: 184 SDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMD 243

Query: 744 MLHRFVMVAF--------------------------WCIQEDPSHRPTMRKVTQ 771
                 +                              C+ ++P+ R  ++++  
Sbjct: 244 SRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 297

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  194 bits (493), Expect = 1e-56
 Identities = 59/296 (19%), Positives = 118/296 (39%), Gaps = 27/296 (9%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
            +E +G+G FG V++G         VAVK  +S  ++     +AE+       H+N++  
Sbjct: 7   LQESIGKGRFGEVWRGKWR---GEEVAVKIFSSR-EERSWFREAEIYQTVMLRHENILGF 62

Query: 565 LGYCDEGQNRL----LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECC 620
           +   ++         LV ++  +G++  +L        +   ++A+  A GL +LH E  
Sbjct: 63  IAADNKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVEGMIKLALSTASGLAHLHMEIV 121

Query: 621 TQ-----IIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA---IRGTKGYVAP 672
                  I H D+K +NIL+  +    I+D GLA          + A     GTK Y+AP
Sbjct: 122 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 181

Query: 673 EWF------RNMPITVKVDVYSYGVLLLEIICLRRNIDNEISK---VDKAILTDWAYDRY 723
           E        ++     + D+Y+ G++  EI                    + +D + +  
Sbjct: 182 EVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEM 241

Query: 724 QERTLEALVENDL-EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
           ++   E  +  ++     +   L     +   C   + + R T  ++ + L  + +
Sbjct: 242 RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  192 bits (489), Expect = 2e-56
 Identities = 64/285 (22%), Positives = 122/285 (42%), Gaps = 28/285 (9%)

Query: 505 FKEE--LGRGAFGTVYKGFVNMGSSNH---VAVKKLNSVF-QDSEKEFKAEVNGIGQTHH 558
              +  +G G FG VYKG +   S      VA+K L + + +    +F  E   +GQ  H
Sbjct: 9   VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSH 68

Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP-NWKLRTEIAMGIAGGLFYLHE 617
            N++RL G   + +  +++ E+M NG +  FL       +      +  GIA G+ YL  
Sbjct: 69  HNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN 128

Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQ--SHTNTAIRGTKGYVAPEWF 675
                 +H D+  +NIL++ +   ++SDFGL+++L  D   ++T +  +    + APE  
Sbjct: 129 MN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 185

Query: 676 RNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND 735
                T   DV+S+G+++ E++        E+S                   +   + + 
Sbjct: 186 SYRKFTSASDVWSFGIVMWEVMTYGERPYWELS----------------NHEVMKAINDG 229

Query: 736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
                 +        +   C Q++ + RP    +  +L+ ++  P
Sbjct: 230 FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 274

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  194 bits (493), Expect = 2e-56
 Identities = 78/327 (23%), Positives = 124/327 (37%), Gaps = 51/327 (15%)

Query: 481 EDQGVSYMNLRCFTYKELVEVTRG---FKEELGRGAFGTVYKGFV----NMGSSNHVAVK 533
            D    Y++ R + Y    E  R    F + LG GAFG V           G S  VAVK
Sbjct: 14  SDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVK 73

Query: 534 KLNSVFQDSEKE-FKAEVNGIGQ-THHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLF 591
            L      SE+E   +E+  + Q   H+N+V LLG C       L++E+   G + ++L 
Sbjct: 74  MLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLR 133

Query: 592 GDSKP-----------------------NWKLRTEIAMGIAGGLFYLHEECCTQIIHCDI 628
              +                         ++     A  +A G+ +L  +     +H D+
Sbjct: 134 SKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDL 190

Query: 629 KPQNILLDDHYNARISDFGLAKLLTLDQSHT-NTAIRGTKGYVAPEWFRNMPITVKVDVY 687
             +N+L+      +I DFGLA+ +  D ++      R    ++APE       T+K DV+
Sbjct: 191 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVW 250

Query: 688 SYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHR 747
           SYG+LL EI  L  N    I                 +     L++N  +          
Sbjct: 251 SYGILLWEIFSLGVNPYPGIP---------------VDANFYKLIQNGFKMDQPFYATEE 295

Query: 748 FVMVAFWCIQEDPSHRPTMRKVTQMLE 774
             ++   C   D   RP+   +T  L 
Sbjct: 296 IYIIMQSCWAFDSRKRPSFPNLTSFLG 322

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  192 bits (488), Expect = 2e-56
 Identities = 71/275 (25%), Positives = 116/275 (42%), Gaps = 31/275 (11%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
             + +G+G FG V  G       N VAVK + +    + + F AE + + Q  H NLV+L
Sbjct: 11  LLQTIGKGEFGDVMLGDYR---GNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQL 65

Query: 565 LGYCDEGQNRL-LVYEFMSNGTVASFLF--GDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           LG   E +  L +V E+M+ G++  +L   G S        + ++ +   + YL      
Sbjct: 66  LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN-- 123

Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT 681
             +H D+  +N+L+ +   A++SDFGL K      S T    +    + APE  R    +
Sbjct: 124 -FVHRDLAARNVLVSEDNVAKVSDFGLTKEA----SSTQDTGKLPVKWTAPEALREKKFS 178

Query: 682 VKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN 741
            K DV+S+G+LL EI    R                  Y R   + +   VE   +    
Sbjct: 179 TKSDVWSFGILLWEIYSFGR----------------VPYPRIPLKDVVPRVEKGYKMDAP 222

Query: 742 VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV 776
                    V   C   D + RP+  ++ + LE +
Sbjct: 223 DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 257

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  193 bits (491), Expect = 3e-56
 Identities = 65/282 (23%), Positives = 115/282 (40%), Gaps = 27/282 (9%)

Query: 505 FKEELGRGAFGTVYKGFV--NMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNL 561
           F E +GRG FG VY G +  N G   H AVK LN +       +F  E   +    H N+
Sbjct: 31  FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 90

Query: 562 VRLLGYCDEGQNR-LLVYEFMSNGTVASFLFGDS-KPNWKLRTEIAMGIAGGLFYLHEEC 619
           + LLG C   +   L+V  +M +G + +F+  ++  P  K      + +A G+       
Sbjct: 91  LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM---KFLA 147

Query: 620 CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT---LDQSHTNTAIRGTKGYVAPEWFR 676
             + +H D+  +N +LD+ +  +++DFGLA+ +     D  H  T  +    ++A E  +
Sbjct: 148 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 207

Query: 677 NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL 736
               T K DV+S+GVLL E++        +++  D                +   +    
Sbjct: 208 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD----------------ITVYLLQGR 251

Query: 737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
             +           V   C       RP+  ++   +  +  
Sbjct: 252 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 293

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  193 bits (490), Expect = 4e-56
 Identities = 71/320 (22%), Positives = 123/320 (38%), Gaps = 46/320 (14%)

Query: 487 YMNLRCFTYKELVEVTRG---FKEELGRGAFGTVYKG----FVNMGSSNHVAVKKLN-SV 538
           Y++     Y    E  R    F + LG GAFG V +      +   ++  VAVK L  S 
Sbjct: 6   YIDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA 65

Query: 539 FQDSEKEFKAEVNGIGQ-THHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP- 596
                +   +E+  +    +H N+V LLG C  G   L++ E+   G + +FL       
Sbjct: 66  HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSF 125

Query: 597 -----------------NWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY 639
                            + +     +  +A G+ +L  +     IH D+  +NILL    
Sbjct: 126 ICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGR 182

Query: 640 NARISDFGLAKLLTLDQSHTN-TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC 698
             +I DFGLA+ +  D ++      R    ++APE   N   T + DV+SYG+ L E+  
Sbjct: 183 ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242

Query: 699 LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQE 758
           L  +                      +     +++     ++          +   C   
Sbjct: 243 LGSS---------------PYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDA 287

Query: 759 DPSHRPTMRKVTQMLEGVVE 778
           DP  RPT +++ Q++E  + 
Sbjct: 288 DPLKRPTFKQIVQLIEKQIS 307

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  192 bits (488), Expect = 5e-56
 Identities = 65/304 (21%), Positives = 122/304 (40%), Gaps = 49/304 (16%)

Query: 505 FKEELGRGAFGTVYKG----FVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHK 559
           +  ++G GAFG V++      +       VAVK L      D + +F+ E   + +  + 
Sbjct: 17  YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNP 76

Query: 560 NLVRLLGYCDEGQNRLLVYEFMSNGTVASFLF------------------------GDSK 595
           N+V+LLG C  G+   L++E+M+ G +  FL                         G   
Sbjct: 77  NIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP 136

Query: 596 PNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLL-TL 654
            +   +  IA  +A G+ YL E      +H D+  +N L+ ++   +I+DFGL++ + + 
Sbjct: 137 LSCAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRNIYSA 193

Query: 655 DQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAI 714
           D    +        ++ PE       T + DV++YGV+L EI                  
Sbjct: 194 DYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ------------ 241

Query: 715 LTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
                Y    E  +  + + ++ A            +   C  + P+ RP+   + ++L+
Sbjct: 242 ---PYYGMAHEEVIYYVRDGNILACPE-NCPLELYNLMRLCWSKLPADRPSFCSIHRILQ 297

Query: 775 GVVE 778
            + E
Sbjct: 298 RMCE 301

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  189 bits (480), Expect = 3e-55
 Identities = 64/272 (23%), Positives = 115/272 (42%), Gaps = 28/272 (10%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN--SVFQDSEKEFKAEVNGIGQTHHKNLV 562
           F  E+GRG+F TVYKG ++  ++  VA  +L    + +   + FK E   +    H N+V
Sbjct: 13  FDIEIGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIV 71

Query: 563 RLLGYC----DEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
           R            +  +LV E M++GT+ ++L        K+       I  GL +LH  
Sbjct: 72  RFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR 131

Query: 619 CCTQIIHCDIKPQNILLDD-HYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
               IIH D+K  NI +     + +I D GLA L    ++    A+ GT  ++APE +  
Sbjct: 132 TP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATLK---RASFAKAVIGTPEFMAPEMYEE 187

Query: 678 MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLE 737
                 VDVY++G+ +LE+                     ++  +   +    +      
Sbjct: 188 -KYDESVDVYAFGMCMLEMATSEYP---------------YSECQNAAQIYRRVTSGVKP 231

Query: 738 AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKV 769
           A  +   +     +   CI+++   R +++ +
Sbjct: 232 ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDL 263

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  185 bits (470), Expect = 2e-53
 Identities = 62/269 (23%), Positives = 104/269 (38%), Gaps = 31/269 (11%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE---KEFKAEVNGIGQTHHKNLVR 563
            E+G G+FG VY    ++ +S  VA+KK++   + S    ++   EV  + +  H N ++
Sbjct: 21  REIGHGSFGAVYFA-RDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ 79

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
             G         LV E+                       +  G   GL YLH      +
Sbjct: 80  YRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NM 136

Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM---PI 680
           IH D+K  NILL +    ++ DFG A ++         +  GT  ++APE    M     
Sbjct: 137 IHRDVKAGNILLSEPGLVKLGDFGSASIMA-----PANSFVGTPYWMAPEVILAMDEGQY 191

Query: 681 TVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN 740
             KVDV+S G+  +E+   +                   ++      L  + +N+  A+ 
Sbjct: 192 DGKVDVWSLGITCIELAERKP----------------PLFNMNAMSALYHIAQNESPALQ 235

Query: 741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKV 769
           +      F      C+Q+ P  RPT   +
Sbjct: 236 SGHWSEYFRNFVDSCLQKIPQDRPTSEVL 264

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  182 bits (464), Expect = 4e-53
 Identities = 71/270 (26%), Positives = 112/270 (41%), Gaps = 28/270 (10%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIGQTHHKNL 561
               LG+G FG VY       S   +A+K L          E + + EV       H N+
Sbjct: 10  IGRPLGKGKFGNVYLA-REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 68

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           +RL GY  +     L+ E+   GTV   L   SK + +        +A  L Y H +   
Sbjct: 69  LRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK--- 125

Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT 681
           ++IH DIKP+N+LL      +I+DFG +      +  T   + GT  Y+ PE        
Sbjct: 126 RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT---LCGTLDYLPPEMIEGRMHD 182

Query: 682 VKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN 741
            KVD++S GVL  E +  +                 +  + YQE T + +   +    + 
Sbjct: 183 EKVDLWSLGVLCYEFLVGKP---------------PFEANTYQE-TYKRISRVEFTFPDF 226

Query: 742 VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ 771
           VT       +    ++ +PS RP +R+V +
Sbjct: 227 VT--EGARDLISRLLKHNPSQRPMLREVLE 254

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  182 bits (463), Expect = 8e-53
 Identities = 62/277 (22%), Positives = 110/277 (39%), Gaps = 29/277 (10%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN--SVFQDSEKEFKAEVNGIGQTHHKNLV 562
               +G G++G   K          +  K+L+  S+ +  ++   +EVN + +  H N+V
Sbjct: 8   VLYTIGTGSYGRCQKI-RRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIV 66

Query: 563 RLLGYCDEGQNRLL--VYEFMSNGTVASFLFGDSKP----NWKLRTEIAMGIAGGLFYLH 616
           R      +  N  L  V E+   G +AS +   +K     + +    +   +   L   H
Sbjct: 67  RYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH 126

Query: 617 E--ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEW 674
              +    ++H D+KP N+ LD   N ++ DFGLA++L  D S       GT  Y++PE 
Sbjct: 127 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKA-FVGTPYYMSPEQ 185

Query: 675 FRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEN 734
              M    K D++S G LL E+  L         K     + +  + R   R  + L E 
Sbjct: 186 MNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNE- 244

Query: 735 DLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ 771
                           +    +     HRP++ ++ +
Sbjct: 245 ----------------IITRMLNLKDYHRPSVEEILE 265

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  181 bits (461), Expect = 2e-52
 Identities = 62/278 (22%), Positives = 100/278 (35%), Gaps = 27/278 (9%)

Query: 505 FKEELGRGAFGTVYKGFVNM--GSSNHVAVKKLNSVFQDSE---KEFKAEVNGIGQTHHK 559
             E+LG G+FG V +G  +   G +  VAVK L            +F  EVN +    H+
Sbjct: 12  LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHR 71

Query: 560 NLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP-NWKLRTEIAMGIAGGLFYLHEE 618
           NL+RL G       + +V E    G++   L            +  A+ +A G+ YL  +
Sbjct: 72  NLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK 130

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH--TNTAIRGTKGYVAPEWFR 676
                IH D+  +N+LL      +I DFGL + L  +  H       +    + APE  +
Sbjct: 131 R---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187

Query: 677 NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL 736
               +   D + +GV L E+    +     ++                 + L  + +   
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN---------------GSQILHKIDKEGE 232

Query: 737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
                         V   C    P  RPT   +   L 
Sbjct: 233 RLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 270

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  180 bits (458), Expect = 4e-52
 Identities = 70/268 (26%), Positives = 112/268 (41%), Gaps = 22/268 (8%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVR 563
             + LG GA+G V    VN  +   VAVK ++     D  +  K E+      +H+N+V+
Sbjct: 9   LVQTLGEGAYGEVQLA-VNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVK 67

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
             G+  EG  + L  E+ S G +   +  D              +  G+ YLH      I
Sbjct: 68  FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---I 124

Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLD-QSHTNTAIRGTKGYVAPEWFRNMPI-T 681
            H DIKP+N+LLD+  N +ISDFGLA +   + +      + GT  YVAPE  +      
Sbjct: 125 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 184

Query: 682 VKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN 741
             VDV+S G++L  ++      D           +DW   +      + +    L  ++ 
Sbjct: 185 EPVDVWSCGIVLTAMLAGELPWDQP--SDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH- 241

Query: 742 VTMLHRFVMVAFWCIQEDPSHRPTMRKV 769
                         + E+PS R T+  +
Sbjct: 242 ------------KILVENPSARITIPDI 257

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  180 bits (457), Expect = 9e-52
 Identities = 62/274 (22%), Positives = 117/274 (42%), Gaps = 28/274 (10%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
              ELG GAFG VYK   N  +S   A K +++  ++  +++  E++ +    H N+V+L
Sbjct: 16  IIGELGDGAFGKVYKA-QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKL 74

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP-NWKLRTEIAMGIAGGLFYLHEECCTQI 623
           L       N  ++ EF + G V + +    +P        +       L YLH+    +I
Sbjct: 75  LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KI 131

Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF-----RNM 678
           IH D+K  NIL     + +++DFG++   T      ++   GT  ++APE       ++ 
Sbjct: 132 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS-FIGTPYWMAPEVVMCETSKDR 190

Query: 679 PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA 738
           P   K DV+S G+ L+E+  +                    ++    R L  + +++   
Sbjct: 191 PYDYKADVWSLGITLIEMAEIEP----------------PHHELNPMRVLLKIAKSEPPT 234

Query: 739 MNNVTML-HRFVMVAFWCIQEDPSHRPTMRKVTQ 771
           +   +     F      C++++   R T  ++ Q
Sbjct: 235 LAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ 268

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  180 bits (458), Expect = 1e-51
 Identities = 70/293 (23%), Positives = 117/293 (39%), Gaps = 40/293 (13%)

Query: 505 FKEELGRGAFGTVYKG-FVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQ-THHKNL 561
           F++ +G G FG V K      G     A+K++     +D  ++F  E+  + +  HH N+
Sbjct: 14  FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 73

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGD----------------SKPNWKLRTEIA 605
           + LLG C+      L  E+  +G +  FL                   S  + +     A
Sbjct: 74  INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 133

Query: 606 MGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRG 665
             +A G+ YL ++   Q IH D+  +NIL+ ++Y A+I+DFGL++    +     T  R 
Sbjct: 134 ADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRG--QEVYVKKTMGRL 188

Query: 666 TKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQE 725
              ++A E       T   DV+SYGVLL EI+ L                    Y     
Sbjct: 189 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT----------------PYCGMTC 232

Query: 726 RTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
             L   +         +        +   C +E P  RP+  ++   L  ++E
Sbjct: 233 AELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 285

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  179 bits (455), Expect = 1e-51
 Identities = 57/278 (20%), Positives = 104/278 (37%), Gaps = 24/278 (8%)

Query: 505 FKEELGRGAFGTVYKGF--VNMGSSNHVAVKKLNSVFQDSEKE-FKAEVNGIGQTHHKNL 561
               +G G FG V++G        +  VA+K   +   DS +E F  E   + Q  H ++
Sbjct: 11  LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 70

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP-NWKLRTEIAMGIAGGLFYLHEECC 620
           V+L+G   E     ++ E  + G + SFL       +       A  ++  L YL  +  
Sbjct: 71  VKLIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR- 128

Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPI 680
              +H DI  +N+L+  +   ++ DFGL++ +     +  +  +    ++APE       
Sbjct: 129 --FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 186

Query: 681 TVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN 740
           T   DV+ +GV + EI+                              +  +   +   M 
Sbjct: 187 TSASDVWMFGVCMWEILMHGV---------------KPFQGVKNNDVIGRIENGERLPMP 231

Query: 741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
                     +   C   DPS RP   ++   L  ++E
Sbjct: 232 P-NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 268

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  181 bits (459), Expect = 1e-51
 Identities = 62/281 (22%), Positives = 107/281 (38%), Gaps = 24/281 (8%)

Query: 505 FKEELGRGAFGTVYKGFV---NMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKN 560
             + LG GAFGTVYKG            VA+K+L  +    + KE   E   +    + +
Sbjct: 13  KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPH 72

Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECC 620
           + RLLG C     +L+         +            +      + IA G+ YL     
Sbjct: 73  VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL---ED 129

Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT-AIRGTKGYVAPEWFRNMP 679
            +++H D+  +N+L+    + +I+DFGLAKLL  ++   +    +    ++A E   +  
Sbjct: 130 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 189

Query: 680 ITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM 739
            T + DV+SYGV + E++                      YD      + +++E      
Sbjct: 190 YTHQSDVWSYGVTVWELMTFGS----------------KPYDGIPASEISSILEKGERLP 233

Query: 740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVP 780
                     M+   C   D   RP  R++      +   P
Sbjct: 234 QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 274

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  178 bits (452), Expect = 5e-51
 Identities = 63/266 (23%), Positives = 120/266 (45%), Gaps = 23/266 (8%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           E++G+GA GTVY   +++ +   VA++++N   Q  ++    E+  + +  + N+V  L 
Sbjct: 26  EKIGQGASGTVYTA-MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLD 84

Query: 567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHC 626
               G    +V E+++ G++   +  ++  +      +       L +LH     Q+IH 
Sbjct: 85  SYLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALEFLHSN---QVIHR 140

Query: 627 DIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDV 686
           DIK  NILL    + +++DFG    +T +QS  +T + GT  ++APE         KVD+
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST-MVGTPYWMAPEVVTRKAYGPKVDI 199

Query: 687 YSYGVLLLEIICLRRNIDNE-ISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVTML 745
           +S G++ +E+I       NE   +    I T+   +      L A+  + L         
Sbjct: 200 WSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLN-------- 251

Query: 746 HRFVMVAFWCIQEDPSHRPTMRKVTQ 771
                    C+  D   R + +++ Q
Sbjct: 252 --------RCLDMDVEKRGSAKELLQ 269

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  173 bits (438), Expect = 5e-49
 Identities = 68/290 (23%), Positives = 125/290 (43%), Gaps = 35/290 (12%)

Query: 505 FKEELGRGAFGTVYKGF----VNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHK 559
              ELG+G+FG VY+G     V       VA+K +N +       EF  E + + + +  
Sbjct: 24  MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 83

Query: 560 NLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGD----------SKPNWKLRTEIAMGIA 609
           ++VRLLG   +GQ  L++ E M+ G + S+L             + P+     ++A  IA
Sbjct: 84  HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA 143

Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT-LDQSHTNTAIRGTKG 668
            G+ YL+     + +H D+  +N ++ + +  +I DFG+ + +   D             
Sbjct: 144 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 200

Query: 669 YVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTL 728
           +++PE  ++   T   DV+S+GV+L EI  L       +S                E+ L
Sbjct: 201 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS---------------NEQVL 245

Query: 729 EALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
             ++E  L    +         +   C Q +P  RP+  ++   ++  +E
Sbjct: 246 RFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 294

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  168 bits (426), Expect = 2e-47
 Identities = 70/298 (23%), Positives = 118/298 (39%), Gaps = 42/298 (14%)

Query: 505 FKEELGRGAFGTVYKGFV----NMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQT-HH 558
             + LGRGAFG V +          +   VAVK L         +   +E+  +    HH
Sbjct: 17  LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 76

Query: 559 KNLVRLLGYC-DEGQNRLLVYEFMSNGTVASFLFGDSKP----------------NWKLR 601
            N+V LLG C   G   +++ EF   G ++++L                        +  
Sbjct: 77  LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 136

Query: 602 TEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT 661
              +  +A G+ +L      + IH D+  +NILL +    +I DFGLA+ +  D  +   
Sbjct: 137 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 193

Query: 662 A-IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAY 720
              R    ++APE   +   T++ DV+S+GVLL EI  L  +    +       + +   
Sbjct: 194 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK------IDEEFC 247

Query: 721 DRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE 778
            R +E T     +     M               C   +PS RPT  ++ + L  +++
Sbjct: 248 RRLKEGTRMRAPDYTTPEMYQ---------TMLDCWHGEPSQRPTFSELVEHLGNLLQ 296

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  169 bits (429), Expect = 3e-47
 Identities = 59/270 (21%), Positives = 107/270 (39%), Gaps = 27/270 (10%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
             EELG GAFG V++      + N+ A K + +  +  ++  + E+  +    H  LV L
Sbjct: 30  IHEELGTGAFGVVHRV-TERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNL 88

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP-NWKLRTEIAMGIAGGLFYLHEECCTQI 623
               ++    +++YEFMS G +   +  +    +     E    +  GL ++HE      
Sbjct: 89  HDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---Y 145

Query: 624 IHCDIKPQNILLDDHYNARI--SDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT 681
           +H D+KP+NI+     +  +   DFGL     LD   +     GT  + APE     P+ 
Sbjct: 146 VHLDLKPENIMFTTKRSNELKLIDFGLTAH--LDPKQSVKVTTGTAEFAAPEVAEGKPVG 203

Query: 682 VKVDVYSYGVLLLEIICLRR--NIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM 739
              D++S GVL   ++        +N+   +      DW  D      +    ++ +   
Sbjct: 204 YYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIR-- 261

Query: 740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKV 769
                           +  DP+ R T+ + 
Sbjct: 262 --------------KLLLADPNTRMTIHQA 277

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  167 bits (424), Expect = 3e-47
 Identities = 71/300 (23%), Positives = 118/300 (39%), Gaps = 44/300 (14%)

Query: 505 FKEELGRGAFGTVYKGF------VNMGSSNHVAVKKLNS-VFQDSEKEFKAEVNGIGQ-T 556
             + LG GAFG V                  VAVK L S   +    +  +E+  +    
Sbjct: 17  LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 76

Query: 557 HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP----------------NWKL 600
            HKN++ LLG C +     ++ E+ S G +  +L     P                + K 
Sbjct: 77  KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 136

Query: 601 RTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN 660
               A  +A G+ YL  +   + IH D+  +N+L+ +    +I+DFGLA+ +     +  
Sbjct: 137 LVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 193

Query: 661 T-AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWA 719
           T   R    ++APE   +   T + DV+S+GVLL EI  L  +                 
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP---------------- 237

Query: 720 YDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEV 779
           Y       L  L++            +   M+   C    PS RPT +++ + L+ +V +
Sbjct: 238 YPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL 297

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  162 bits (411), Expect = 2e-45
 Identities = 57/276 (20%), Positives = 101/276 (36%), Gaps = 30/276 (10%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE---KEFKAEVNGIGQTHHKNL 561
           F + LG G+F TV      + +S   A+K L       E        E + + +  H   
Sbjct: 12  FGKILGEGSFSTVVLA-RELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 70

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           V+L     + +       +  NG +  ++      +          I   L YLH +   
Sbjct: 71  VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG-- 128

Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN-TAIRGTKGYVAPEWFRNMPI 680
            IIH D+KP+NILL++  + +I+DFG AK+L+ +       +  GT  YV+PE       
Sbjct: 129 -IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSA 187

Query: 681 TVKVDVYSYGVLLLEIICLRR--NIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA 738
               D+++ G ++ +++         NE     K I  ++ +          LVE     
Sbjct: 188 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVE----- 242

Query: 739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
                            +  D + R    ++     
Sbjct: 243 ---------------KLLVLDATKRLGCEEMEGYGP 263

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  160 bits (407), Expect = 1e-44
 Identities = 60/269 (22%), Positives = 106/269 (39%), Gaps = 20/269 (7%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN-SVFQDSEKEFKAEVNGIGQTHHKNLVR 563
           F++ LG GAF  V     +  +   VA+K +     +  E   + E+  + +  H N+V 
Sbjct: 13  FRDVLGTGAFSEVILA-EDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVA 71

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           L    + G +  L+ + +S G +   +        +  + +   +   + YLH+      
Sbjct: 72  LDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHR 131

Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVK 683
                      LD+     ISDFGL+K+   D     +   GT GYVAPE     P +  
Sbjct: 132 DLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYSKA 189

Query: 684 VDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVT 743
           VD +S GV+   ++C                  D    +  E+ L+A  E D    ++++
Sbjct: 190 VDCWSIGVIAYILLCGYP------------PFYDENDAKLFEQILKAEYEFDSPYWDDIS 237

Query: 744 -MLHRFVMVAFWCIQEDPSHRPTMRKVTQ 771
                F+      +++DP  R T  +  Q
Sbjct: 238 DSAKDFIR---HLMEKDPEKRFTCEQALQ 263

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  162 bits (410), Expect = 1e-44
 Identities = 61/272 (22%), Positives = 111/272 (40%), Gaps = 27/272 (9%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
             EELG GAFG V++  V   +      K +N+ +   +   K E++ + Q HH  L+ L
Sbjct: 33  ILEELGSGAFGVVHRC-VEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINL 91

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP-NWKLRTEIAMGIAGGLFYLHEECCTQI 623
               ++    +L+ EF+S G +   +  +    +             GL ++HE     I
Sbjct: 92  HDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SI 148

Query: 624 IHCDIKPQNILLDDHYNARI--SDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT 681
           +H DIKP+NI+ +    + +   DFGLA  L  D+    T    T  + APE     P+ 
Sbjct: 149 VHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVT--TATAEFAAPEIVDREPVG 206

Query: 682 VKVDVYSYGVLLLEIICLRR--NIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM 739
              D+++ GVL   ++        ++++  +      DW +D     ++           
Sbjct: 207 FYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSP--------- 257

Query: 740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ 771
                   F+      +Q++P  R T+    +
Sbjct: 258 ----EAKDFIK---NLLQKEPRKRLTVHDALE 282

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  154 bits (390), Expect = 3e-42
 Identities = 54/271 (19%), Positives = 103/271 (38%), Gaps = 26/271 (9%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
             E+LGRG FG V++  V   S      K +     D +   K E++ +    H+N++ L
Sbjct: 9   IAEDLGRGEFGIVHRC-VETSSKKTYMAKFVKVKGTD-QVLVKKEISILNIARHRNILHL 66

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP-NWKLRTEIAMGIAGGLFYLHEECCTQI 623
               +  +  ++++EF+S   +   +   +   N +        +   L +LH      I
Sbjct: 67  HESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NI 123

Query: 624 IHCDIKPQNILLDDHYNAR--ISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT 681
            H DI+P+NI+     ++   I +FG A+ L    +           Y APE  ++  ++
Sbjct: 124 GHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLL--FTAPEYYAPEVHQHDVVS 181

Query: 682 VKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN 741
              D++S G L+  ++                        +  E  + A    D EA   
Sbjct: 182 TATDMWSLGTLVYVLLSGIN------------PFLAETNQQIIENIMNAEYTFDEEAFKE 229

Query: 742 VT-MLHRFVMVAFWCIQEDPSHRPTMRKVTQ 771
           ++     FV      + ++   R T  +  Q
Sbjct: 230 ISIEAMDFVD---RLLVKERKSRMTASEALQ 257

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  151 bits (383), Expect = 7e-42
 Identities = 60/284 (21%), Positives = 106/284 (37%), Gaps = 32/284 (11%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE---KEFKAEVNGIGQTHHKNL 561
             E LG G    V+    ++     VAVK L +           F+ E       +H  +
Sbjct: 11  LGEILGFGGMSEVHLA-RDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAI 69

Query: 562 VRLLGYC----DEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
           V +          G    +V E++   T+   +  +     K   E+       L + H+
Sbjct: 70  VAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQ 129

Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN--TAIRGTKGYVAPEWF 675
                IIH D+KP NI++      ++ DFG+A+ +    +      A+ GT  Y++PE  
Sbjct: 130 NG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 186

Query: 676 RNMPITVKVDVYSYGVLLLEIICLRR--NIDNEISKVDKAILTDWAYDRYQERTLEALVE 733
           R   +  + DVYS G +L E++        D+ +S   + +  D      +   L A   
Sbjct: 187 RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSA--- 243

Query: 734 NDLEAMNNVTMLHRFVMVAFWCIQEDPSHRP-TMRKVTQMLEGV 776
                      L   V+     + ++P +R  T  ++   L  V
Sbjct: 244 ----------DLDAVVL---KALAKNPENRYQTAAEMRADLVRV 274

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  150 bits (379), Expect = 3e-41
 Identities = 57/283 (20%), Positives = 111/283 (39%), Gaps = 40/283 (14%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN---------SVFQDSEKEFKAEVNGIGQ 555
            KE LGRG    V +  ++  +    AVK ++            Q+  +    EV+ + +
Sbjct: 7   PKEILGRGVSSVVRRC-IHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRK 65

Query: 556 TH-HKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFY 614
              H N+++L    +      LV++ M  G +  +L      + K   +I   +   +  
Sbjct: 66  VSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICA 125

Query: 615 LHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEW 674
           LH+     I+H D+KP+NILLDD  N +++DFG +    LD       + GT  Y+APE 
Sbjct: 126 LHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQ--LDPGEKLREVCGTPSYLAPEI 180

Query: 675 FR------NMPITVKVDVYSYGVLLLEIICLRR--NIDNEISKVDKAILTDWAYDRYQER 726
                   +     +VD++S GV++  ++          ++  +   +  ++ +   +  
Sbjct: 181 IECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWD 240

Query: 727 TLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKV 769
                V++ +                   +   P  R T  + 
Sbjct: 241 DYSDTVKDLVS----------------RFLVVQPQKRYTAEEA 267

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  150 bits (380), Expect = 4e-41
 Identities = 50/280 (17%), Positives = 93/280 (33%), Gaps = 26/280 (9%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL 564
              ++G G+FG +Y G  ++ +   VA+K      +    +   E            +  
Sbjct: 11  LGRKIGSGSFGDIYLG-TDIAAGEEVAIKLECV--KTKHPQLHIESKIYKMMQGGVGIPT 67

Query: 565 LGYC-DEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           + +C  EG   ++V E +       F F   K + K    +A  +   + Y+H +     
Sbjct: 68  IRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NF 124

Query: 624 IHCDIKPQNIL---LDDHYNARISDFGLAKLLTLDQSHT------NTAIRGTKGYVAPEW 674
           IH D+KP N L           I DFGLAK     ++H       N  + GT  Y +   
Sbjct: 125 IHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINT 184

Query: 675 FRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEN 734
              +  + + D+ S G +L+             +   +      +  +     +E L + 
Sbjct: 185 HLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM-STPIEVLCKG 243

Query: 735 DLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
                              +C       +P    + Q+  
Sbjct: 244 YPSEFATYLN---------FCRSLRFDDKPDYSYLRQLFR 274

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  151 bits (382), Expect = 4e-41
 Identities = 64/269 (23%), Positives = 108/269 (40%), Gaps = 31/269 (11%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN---SVFQDSEKEFKAEVNGIGQT-HHKN 560
             + LG+G+FG V+       ++   A+K L     +  D  +    E   +     H  
Sbjct: 6   LHKMLGKGSFGKVFLA-EFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPF 64

Query: 561 LVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECC 620
           L  +       +N   V E+++ G +   +    K +    T  A  I  GL +LH +  
Sbjct: 65  LTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG- 123

Query: 621 TQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPI 680
             I++ D+K  NILLD   + +I+DFG+ K   L  + TNT   GT  Y+APE       
Sbjct: 124 --IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNT-FCGTPDYIAPEILLGQKY 180

Query: 681 TVKVDVYSYGVLLLEIICLRR--NIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA 738
              VD +S+GVLL E++  +   +  +E        + +  Y R+ E+  + L+      
Sbjct: 181 NHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLV----- 235

Query: 739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMR 767
                               +P  R  +R
Sbjct: 236 ---------------KLFVREPEKRLGVR 249

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  151 bits (381), Expect = 4e-41
 Identities = 60/270 (22%), Positives = 106/270 (39%), Gaps = 31/270 (11%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE---FKAEVNGIGQTHHKNL 561
               LG G+FG V+    +  +  + A+K L        K+      E   +    H  +
Sbjct: 8   ILRTLGTGSFGRVHLI-RSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFI 66

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           +R+ G   + Q   ++ +++  G + S L    +    +    A  +   L YLH +   
Sbjct: 67  IRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD-- 124

Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT 681
            II+ D+KP+NILLD + + +I+DFG AK +          + GT  Y+APE     P  
Sbjct: 125 -IIYRDLKPENILLDKNGHIKITDFGFAKYV----PDVTYTLCGTPDYIAPEVVSTKPYN 179

Query: 682 VKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN 741
             +D +S+G+L+ E++                      YD    +T E ++  +L     
Sbjct: 180 KSIDWWSFGILIYEMLAGYTPF----------------YDSNTMKTYEKILNAELRFPPF 223

Query: 742 VT-MLHRFVMVAFWCIQEDPSHRPTMRKVT 770
               +   +      I  D S R    +  
Sbjct: 224 FNEDVKDLLS---RLITRDLSQRLGNLQNG 250

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  151 bits (382), Expect = 9e-41
 Identities = 56/274 (20%), Positives = 94/274 (34%), Gaps = 31/274 (11%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGI---GQTHH 558
               +GRG FG VY       +    A+K L+      +  E     E   +        
Sbjct: 8   VHRIIGRGGFGEVYGC-RKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDC 66

Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
             +V +            + + M+ G +   L      +       A  I  GL ++H  
Sbjct: 67  PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR 126

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF-RN 677
               +++ D+KP NILLD+H + RISD GLA   +  + H      GT GY+APE   + 
Sbjct: 127 F---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA---SVGTHGYMAPEVLQKG 180

Query: 678 MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLE 737
           +      D +S G +L +++          +K    I                      E
Sbjct: 181 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV-------------E 227

Query: 738 AMNNVT-MLHRFVMVAFWCIQEDPSHRPTMRKVT 770
             ++ +  L   +      +Q D + R       
Sbjct: 228 LPDSFSPELRSLLE---GLLQRDVNRRLGCLGRG 258

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  147 bits (372), Expect = 4e-40
 Identities = 63/282 (22%), Positives = 111/282 (39%), Gaps = 21/282 (7%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE-----FKAEVNGIGQTHHKNL 561
           + LG G F TVYK   +  ++  VA+KK+    +   K+        E+  + +  H N+
Sbjct: 4   DFLGEGQFATVYKA-RDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNI 62

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           + LL       N  LV++FM                        +    GL YLH+    
Sbjct: 63  IGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW-- 120

Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE-WFRNMPI 680
            I+H D+KP N+LLD++   +++DFGLAK      +   T    T+ Y APE  F     
Sbjct: 121 -ILHRDLKPNNLLLDENGVLKLADFGLAKSFG-SPNRAYTHQVVTRWYRAPELLFGARMY 178

Query: 681 TVKVDVYSYGVLLLEIICLR-----RNIDNEISKVDKAILTDWAYDRYQERTLEALVEND 735
            V VD+++ G +L E++         +  ++++++ + + T          +L   V   
Sbjct: 179 GVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK 238

Query: 736 LEAMNNVTMLHRFVMVAF-----WCIQEDPSHRPTMRKVTQM 772
                 +  +                  +P  R T  +  +M
Sbjct: 239 SFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 280

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  145 bits (365), Expect = 4e-39
 Identities = 57/285 (20%), Positives = 111/285 (38%), Gaps = 25/285 (8%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLN--SVFQDSEKEFKAEVN---GIGQTHHKNL 561
            E+G GA+G V+K          VA+K++   +  +        EV     +    H N+
Sbjct: 13  AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNV 72

Query: 562 VRLLGYC----DEGQNRLLVYEFMSNGTVASFLFGDSKP--NWKLRTEIAMGIAGGLFYL 615
           VRL   C     + + +L +     +  + ++L    +P    +   ++   +  GL +L
Sbjct: 73  VRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL 132

Query: 616 HEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWF 675
           H      ++H D+KPQNIL+      +++DFGLA++         T++  T  Y APE  
Sbjct: 133 HSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSVVVTLWYRAPEVL 187

Query: 676 RNMPITVKVDVYSYGVLLLEIICLRR-----NIDNEISKVDKAILTDWAYDRYQERTLEA 730
                   VD++S G +  E+   +      +  +++ K+   I      D  ++  L  
Sbjct: 188 LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR 247

Query: 731 LVENDLEAMNNVTMLHRFVMVAF----WCIQEDPSHRPTMRKVTQ 771
              +   A      +     +       C+  +P+ R +      
Sbjct: 248 QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 292

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  143 bits (360), Expect = 1e-38
 Identities = 51/276 (18%), Positives = 107/276 (38%), Gaps = 18/276 (6%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS--EKEFKAEVNGIGQTHHKNLVRL 564
           E++G G +G VYK   N G     A+KK+    +D         E++ + +  H N+V+L
Sbjct: 8   EKIGEGTYGVVYKAQNNYG--ETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKL 65

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
                  +  +LV+E +           +            + +  G+ Y H+     ++
Sbjct: 66  YDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR---VL 122

Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKV 684
           H D+KPQN+L++     +I+DFGLA+   +        I             +   +  +
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTI 182

Query: 685 DVYSYGVLLLEIICLR-----RNIDNEISKVDKAILTDWAYDRYQERTLEALVEN--DLE 737
           D++S G +  E++         +  +++ ++ + + T  + +      L     N    E
Sbjct: 183 DIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYE 242

Query: 738 AMNNVTMLHRFVMVAF----WCIQEDPSHRPTMRKV 769
            +   + L              ++ DP+ R T ++ 
Sbjct: 243 PLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQA 278

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (358), Expect = 3e-38
 Identities = 63/277 (22%), Positives = 111/277 (40%), Gaps = 34/277 (12%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE------KEFKAEVNGIGQTHH 558
             EELG G F  V K      +    A K +      S       ++ + EV+ + +  H
Sbjct: 14  TGEELGSGQFAVVKKC-REKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQH 72

Query: 559 KNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
            N++ L    +   + +L+ E ++ G +  FL        +  TE    I  G++YLH  
Sbjct: 73  PNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 132

Query: 619 CCTQIIHCDIKPQNILLDDH----YNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEW 674
               I H D+KP+NI+L D        +I DFGLA    +D  +    I GT  +VAPE 
Sbjct: 133 Q---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDFGNEFKNIFGTPEFVAPEI 187

Query: 675 FRNMPITVKVDVYSYGVLLLEIICLRRNI--DNEISKVDKAILTDWAYDRYQERTLEALV 732
               P+ ++ D++S GV+   ++        D +   +      ++ ++        AL 
Sbjct: 188 VNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALA 247

Query: 733 ENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKV 769
           ++ +                   + +DP  R T++  
Sbjct: 248 KDFIR----------------RLLVKDPKKRMTIQDS 268

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (358), Expect = 8e-38
 Identities = 56/295 (18%), Positives = 116/295 (39%), Gaps = 26/295 (8%)

Query: 497 ELVEVTRGFK--EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-FQDSEKEFKAEVNGI 553
           ++ +V   +     +G GA+G V     +  +   VA+KK++    Q   +    E+  +
Sbjct: 2   QVFDVGPRYTNLSYIGEGAYGMVCSA-YDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 60

Query: 554 GQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFG---DSKPNWKLRTEIAMGIAG 610
            +  H+N++ +           +   ++    + + L+        +          I  
Sbjct: 61  LRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILR 120

Query: 611 GLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH--TNTAIRGTKG 668
           GL Y+H      ++H D+KP N+LL+   + +I DFGLA++   D  H    T    T+ 
Sbjct: 121 GLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 177

Query: 669 YVAPEWFRN-MPITVKVDVYSYGVLLLEIICLR-----RNIDNEISKVDKAILTDWAYDR 722
           Y APE   N    T  +D++S G +L E++  R     ++  ++++ +   + +    D 
Sbjct: 178 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL 237

Query: 723 YQERTLEALVENDLEAMNNVTMLHR--------FVMVAFWCIQEDPSHRPTMRKV 769
                L+A          N    +R         + +    +  +P  R  + + 
Sbjct: 238 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 292

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  140 bits (354), Expect = 9e-38
 Identities = 40/282 (14%), Positives = 89/282 (31%), Gaps = 28/282 (9%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQ-THHKNLVR 563
               +G G+FG +++G  N+ ++  VA+K      +    + + E            +  
Sbjct: 9   VGRRIGEGSFGVIFEG-TNLLNNQQVAIKFEPR--RSDAPQLRDEYRTYKLLAGCTGIPN 65

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           +  +  EG + +LV + +             K + K     A  +   +  +HE+    +
Sbjct: 66  VYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS---L 122

Query: 624 IHCDIKPQNILLDDHYN-----ARISDFGLAKLLTLDQSHTN------TAIRGTKGYVAP 672
           ++ DIKP N L+    +       + DFG+ K      +  +        + GT  Y++ 
Sbjct: 123 VYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSI 182

Query: 673 EWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALV 732
                   + + D+ + G + +  +                   +   ++ Q   L  L 
Sbjct: 183 NTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL-KAATNKQKYERIGEKKQSTPLRELC 241

Query: 733 ENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLE 774
               E          F     +         P    +  +  
Sbjct: 242 AGFPEE---------FYKYMHYARNLAFDATPDYDYLQGLFS 274

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  141 bits (355), Expect = 2e-37
 Identities = 57/274 (20%), Positives = 102/274 (37%), Gaps = 31/274 (11%)

Query: 506 KEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLL 565
            + LG G  G V +   N  +    A+K L      + +E +        +   ++VR++
Sbjct: 17  SQVLGLGINGKVLQI-FNKRTQEKFALKMLQDC-PKARREVELHWR---ASQCPHIVRIV 71

Query: 566 GYCD----EGQNRLLVYEFMSNGTVASFL--FGDSKPNWKLRTEIAMGIAGGLFYLHEEC 619
              +      +  L+V E +  G + S +   GD     +  +EI   I   + YLH   
Sbjct: 72  DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI- 130

Query: 620 CTQIIHCDIKPQNILLDDHYN---ARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR 676
              I H D+KP+N+L          +++DFG AK  T   S T      T  YVAPE   
Sbjct: 131 --NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP--CYTPYYVAPEVLG 186

Query: 677 NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL 736
                   D++S GV++  ++C      +                  + R      E   
Sbjct: 187 PEKYDKSCDMWSLGVIMYILLCGYPPFYSN--------HGLAISPGMKTRIRMGQYEFPN 238

Query: 737 EAMNNVT-MLHRFVMVAFWCIQEDPSHRPTMRKV 769
              + V+  +   +      ++ +P+ R T+ + 
Sbjct: 239 PEWSEVSEEVKMLIR---NLLKTEPTQRMTITEF 269

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  139 bits (350), Expect = 3e-37
 Identities = 51/277 (18%), Positives = 106/277 (38%), Gaps = 18/277 (6%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE--KEFKAEVNGIGQTHHKNLVRL 564
           E++G G +GTV+K   N  +   VA+K++     D         E+  + +  HKN+VRL
Sbjct: 8   EKIGEGTYGTVFKA-KNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL 66

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQII 624
                  +   LV+EF        F   +   + ++       +  GL + H      ++
Sbjct: 67  HDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVL 123

Query: 625 HCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKV 684
           H D+KPQN+L++ +   ++++FGLA+   +     +  +           F     +  +
Sbjct: 124 HRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSI 183

Query: 685 DVYSYGVLLLEIICLRR---NIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN 741
           D++S G +  E+    R     ++   ++ +           Q  ++  L +     M  
Sbjct: 184 DMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYP 243

Query: 742 VTMLHRFVMVAF---------WCIQEDPSHRPTMRKV 769
            T     V+              ++ +P  R +  + 
Sbjct: 244 ATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEA 280

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  139 bits (350), Expect = 3e-37
 Identities = 50/278 (17%), Positives = 98/278 (35%), Gaps = 20/278 (7%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE--KEFKAEVNGIGQTHHKNLVRL 564
           E++G G +G VYK   N  +   VA+KK+    +          E++ + + +H N+V+L
Sbjct: 8   EKIGEGTYGVVYKA-RNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66

Query: 565 LGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP-NWKLRTEIAMGIAGGLFYLHEECCTQI 623
           L          LV+EF+                   L       +  GL + H      +
Sbjct: 67  LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---V 123

Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVK 683
           +H D+KPQN+L++     +++DFGLA+   +        +                 +  
Sbjct: 124 LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 183

Query: 684 VDVYSYGVLLLEIICLR------------RNIDNEISKVDKAILTDWAYDRYQERTLEAL 731
           VD++S G +  E++  R              I   +   D+ +          + +    
Sbjct: 184 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 243

Query: 732 VENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKV 769
              D   +    +      +    +  DP+ R + +  
Sbjct: 244 ARQDFSKVVP-PLDEDGRSLLSQMLHYDPNKRISAKAA 280

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  138 bits (348), Expect = 4e-37
 Identities = 58/278 (20%), Positives = 102/278 (36%), Gaps = 46/278 (16%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLN------SVFQDSEKEFKAEVNGIGQ--T 556
               LG G FG+VY G + +  +  VA+K +            +      EV  + +  +
Sbjct: 8   VGPLLGSGGFGSVYSG-IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS 66

Query: 557 HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKP-NWKLRTEIAMGIAGGLFYL 615
               ++RLL + +   + +L+ E             +      +L       +   + + 
Sbjct: 67  GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 126

Query: 616 HEECCTQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEW 674
           H      ++H DIK +NIL+D +    ++ DFG   LL   +    T   GT+ Y  PEW
Sbjct: 127 HN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEW 180

Query: 675 FRNMP-ITVKVDVYSYGVLLLEIICLRR--NIDNEISKVDKAILTDWAYDRYQERTLEAL 731
            R          V+S G+LL +++C       D EI +         + +       + L
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE------CQHL 234

Query: 732 VENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKV 769
           +                     WC+   PS RPT  ++
Sbjct: 235 IR--------------------WCLALRPSDRPTFEEI 252

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (339), Expect = 3e-35
 Identities = 58/270 (21%), Positives = 101/270 (37%), Gaps = 28/270 (10%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE---FKAEVNGIGQTHHKNL 561
           + + LG+G FG V        +  + A+K L      ++ E      E   +  T H  L
Sbjct: 9   YLKLLGKGTFGKVILV-REKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67

Query: 562 VRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
             L            V E+ + G +   L  +     +        I   L YLH     
Sbjct: 68  TALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR--- 124

Query: 622 QIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPIT 681
            +++ DIK +N++LD   + +I+DFGL K    D +   T   GT  Y+APE   +    
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEVLEDNDYG 183

Query: 682 VKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN 741
             VD +  GV++ E++C R                   Y++  ER  E ++  ++     
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPF----------------YNQDHERLFELILMEEIRFPRT 227

Query: 742 VT-MLHRFVMVAFWCIQEDPSHRPTMRKVT 770
           ++      +      +++DP  R       
Sbjct: 228 LSPEAKSLLA---GLLKKDPKQRLGGGPSD 254

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  133 bits (336), Expect = 5e-35
 Identities = 50/291 (17%), Positives = 102/291 (35%), Gaps = 32/291 (10%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDS--EKEFKAEVNGIGQTHHKNLVRL 564
            ++G+G FG V+K   +  +   VA+KK+    +          E+  +    H+N+V L
Sbjct: 16  AKIGQGTFGEVFKA-RHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNL 74

Query: 565 LGYCDEGQNR--------LLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLH 616
           +  C    +          LV++F  +           K        +   +  GL+Y+H
Sbjct: 75  IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 134

Query: 617 EECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS---HTNTAIRGTKGYVAPE 673
                 I+H D+K  N+L+      +++DFGLA+  +L ++   +  T    T  Y  PE
Sbjct: 135 RNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPE 191

Query: 674 WFRN-MPITVKVDVYSYGVLLLEIICLR-----RNIDNEISKVDKAILTDWAYDRYQERT 727
                      +D++  G ++ E+             ++++ + +   +           
Sbjct: 192 LLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDN 251

Query: 728 LEALVENDLEAMNNVTMLHRFVMVAF---------WCIQEDPSHRPTMRKV 769
            E   + +L       +  R                 +  DP+ R      
Sbjct: 252 YELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 302

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (337), Expect = 7e-35
 Identities = 56/286 (19%), Positives = 101/286 (35%), Gaps = 30/286 (10%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLG 566
           + +G G+FG VY+      S   VA+KK+       ++    E+  + +  H N+VRL  
Sbjct: 26  KVIGNGSFGVVYQA-KLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVRLRY 80

Query: 567 YCDEGQNR------LLVYEFMSNGTVASFLFGDSKP---NWKLRTEIAMGIAGGLFYLHE 617
           +      +       LV +++                             +   L Y+H 
Sbjct: 81  FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140

Query: 618 ECCTQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFR 676
                I H DIKPQN+LLD D    ++ DFG AK L        + I           F 
Sbjct: 141 FG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV-RGEPNVSYICSRYYRAPELIFG 196

Query: 677 NMPITVKVDVYSYGVLLLEIICLRR-----NIDNEISKVDKAILT------DWAYDRYQE 725
               T  +DV+S G +L E++  +      +  +++ ++ K + T            Y E
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE 256

Query: 726 RTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ 771
                +  +    +         + +    ++  P+ R T  +   
Sbjct: 257 FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  128 bits (322), Expect = 7e-33
 Identities = 57/267 (21%), Positives = 100/267 (37%), Gaps = 29/267 (10%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKE---FKAEVNGIGQTHHKNLVR 563
           + LG G+FG V     +  S NH A+K L+       K+      E   +   +   LV+
Sbjct: 47  KTLGTGSFGRVMLV-KHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105

Query: 564 LLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQI 623
           L     +  N  +V E+++ G + S L    + +       A  I     YLH      +
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DL 162

Query: 624 IHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVK 683
           I+ D+KP+N+L+D     +++DFG AK            + GT   +APE   +      
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWTLCGTPEALAPEIILSKGYNKA 218

Query: 684 VDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNVT 743
           VD ++ GVL+ E+                       +     +  E +V   +   ++ +
Sbjct: 219 VDWWALGVLIYEMAAGYPPF----------------FADQPIQIYEKIVSGKVRFPSHFS 262

Query: 744 MLHRFVMVAFWCIQEDPSHRPTMRKVT 770
                  +    +Q D + R    K  
Sbjct: 263 --SDLKDLLRNLLQVDLTKRFGNLKNG 287

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  124 bits (313), Expect = 9e-32
 Identities = 70/305 (22%), Positives = 117/305 (38%), Gaps = 38/305 (12%)

Query: 493 FTYKELVEVTRGFK------EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE--K 544
           F  +E+ +     +      + +G GA+G V    V+  +   VA+KKL   FQ     K
Sbjct: 4   FYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSA-VDGRTGAKVAIKKLYRPFQSELFAK 62

Query: 545 EFKAEVNGIGQTHHKNLVRLLGYCDEGQNR------LLVYEFMSNGTVASFLFGDSKPNW 598
               E+  +    H+N++ LL      +         LV  FM  GT    L    K   
Sbjct: 63  RAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGE 120

Query: 599 KLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH 658
                +   +  GL Y+H       IH D+KP N+ +++    +I DFGLA+        
Sbjct: 121 DRIQFLVYQMLKGLRYIHAAGI---IHRDLKPGNLAVNEDCELKILDFGLARQA----DS 173

Query: 659 TNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLR-----RNIDNEISKVDK 712
             T    T+ Y APE   N M  T  VD++S G ++ E+I  +      +  +++ ++ K
Sbjct: 174 EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMK 233

Query: 713 AILT----DWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAF----WCIQEDPSHRP 764
              T         +  E         +LE  +  ++L     +A       +  D   R 
Sbjct: 234 VTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRV 293

Query: 765 TMRKV 769
           T  + 
Sbjct: 294 TAGEA 298

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  123 bits (309), Expect = 2e-31
 Identities = 59/290 (20%), Positives = 113/290 (38%), Gaps = 37/290 (12%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQ-THHKNLVR 563
              +LGRG +  V++  +N+ ++  V VK L       +K+ K E+  +       N++ 
Sbjct: 39  LVRKLGRGKYSEVFEA-INITNNEKVVVKILK---PVKKKKIKREIKILENLRGGPNIIT 94

Query: 564 LLGYCDEGQNRL--LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCT 621
           L     +  +R   LV+E ++N                        I   L Y H     
Sbjct: 95  LADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMG-- 149

Query: 622 QIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPE-WFRNMP 679
            I+H D+KP N+++D +H   R+ D+GLA+     Q +       ++ +  PE       
Sbjct: 150 -IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRV--ASRYFKGPELLVDYQM 206

Query: 680 ITVKVDVYSYGVLLLEIICLR------RNIDNEISKVDKAILTDWAYDRYQERTLEALVE 733
               +D++S G +L  +I  +       +  +++ ++ K + T+  YD   +  +E    
Sbjct: 207 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPR 266

Query: 734 -NDLEAMNNVTMLHRFVMVAFW-------------CIQEDPSHRPTMRKV 769
            ND+   ++     RFV                   ++ D   R T R+ 
Sbjct: 267 FNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 316

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  119 bits (299), Expect = 4e-30
 Identities = 58/281 (20%), Positives = 106/281 (37%), Gaps = 38/281 (13%)

Query: 505 FKEELGRGAFGTVYKGF--VNMGSSNHVAVKKLN--SVFQDSE--KEFKAEVNGIGQ-TH 557
             + LG GA+G V+         +    A+K L   ++ Q ++  +  + E   +     
Sbjct: 28  LLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQ 87

Query: 558 HKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE 617
              LV L           L+ ++++ G + + L    +            I   L +LH+
Sbjct: 88  SPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHK 147

Query: 618 ECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRN 677
                II+ DIK +NILLD + +  ++DFGL+K    D++       GT  Y+AP+  R 
Sbjct: 148 L---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRG 204

Query: 678 MP--ITVKVDVYSYGVLLLEIICLRR-----NIDNEISKVDKAILT-DWAYDRYQERTLE 729
                   VD +S GVL+ E++            N  +++ + IL  +  Y +      +
Sbjct: 205 GDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAK 264

Query: 730 ALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVT 770
            L++                      + +DP  R       
Sbjct: 265 DLIQ--------------------RLLMKDPKKRLGCGPRD 285

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  119 bits (299), Expect = 6e-30
 Identities = 67/295 (22%), Positives = 119/295 (40%), Gaps = 41/295 (13%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE--KEFKAEVNGIGQTHHKNLVRL 564
           + +G GA G V     +     +VA+KKL+  FQ+    K    E+  +   +HKN++ L
Sbjct: 23  KPIGSGAQGIVCAA-YDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISL 81

Query: 565 LGYC------DEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEE 618
           L         +E Q+  LV E M             + + +  + +   +  G+ +LH  
Sbjct: 82  LNVFTPQKTLEEFQDVYLVMELMDANL---CQVIQMELDHERMSYLLYQMLCGIKHLHSA 138

Query: 619 CCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNM 678
                IH D+KP NI++      +I DFGLA+  T   S   T    T+ Y APE    M
Sbjct: 139 GI---IHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGM 193

Query: 679 PITVKVDVYSYGVLLLEIICLR-----RNIDNEISKVDKAILTDWAYD------------ 721
                VD++S G ++ E++  +     R+  ++ +KV + + T                 
Sbjct: 194 GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 253

Query: 722 ----RYQERTLEALVENDL---EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKV 769
               +Y   T   L  + L   ++ +N     +   +    +  DP+ R ++   
Sbjct: 254 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 308

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (279), Expect = 2e-27
 Identities = 61/296 (20%), Positives = 107/296 (36%), Gaps = 30/296 (10%)

Query: 496 KELVEVTRGFK--EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSE--KEFKAEVN 551
           K + EV   ++    +G GA+G+V     +  +   VAVKKL+  FQ     K    E+ 
Sbjct: 11  KTIWEVPERYQNLSPVGSGAYGSVCAA-FDTKTGLRVAVKKLSRPFQSIIHAKRTYRELR 69

Query: 552 GIGQTHHKNLVRLLGYCDEGQ----NRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMG 607
            +    H+N++ LL      +       +       G   + +    K        +   
Sbjct: 70  LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 129

Query: 608 IAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTK 667
           I  GL Y+H       IH D+KP N+ +++    +I DFGLA+          T    T+
Sbjct: 130 ILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATR 182

Query: 668 GYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQER 726
            Y APE   N M     VD++S G ++ E++  R             ++         E 
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 242

Query: 727 TLEALVENDLEAMNNVTMLHRFVMVAFW-------------CIQEDPSHRPTMRKV 769
             +   E+    + ++T + +      +              +  D   R T  + 
Sbjct: 243 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 298

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  102 bits (253), Expect = 6e-24
 Identities = 46/213 (21%), Positives = 82/213 (38%), Gaps = 20/213 (9%)

Query: 505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNS---VFQDSEKEFK-------AEVNGIG 554
              +LG G F TV+    +M ++ HVA+K +       + +E E K       A+     
Sbjct: 17  LVRKLGWGHFSTVWLA-KDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKED 75

Query: 555 QTHHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTE-----IAMGIA 609
                ++++LL + +      +    +      + L    K   +         I+  + 
Sbjct: 76  SMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLL 135

Query: 610 GGLFYLHEECCTQIIHCDIKPQNILLD-DHYNARISDFGLAKLLTLDQSHTNTA-IRGTK 667
            GL Y+H  C   IIH DIKP+N+L++       +    +A L        +      T+
Sbjct: 136 LGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTR 193

Query: 668 GYVAPEWFRNMPITVKVDVYSYGVLLLEIICLR 700
            Y +PE     P     D++S   L+ E+I   
Sbjct: 194 EYRSPEVLLGAPWGCGADIWSTACLIFELITGD 226

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 80.2 bits (197), Expect = 7e-18
 Identities = 26/201 (12%), Positives = 58/201 (28%), Gaps = 27/201 (13%)

Query: 507 EELGRGAFGTVYKGFVNMGSSNHVAVK----------KLNSVFQDSEKEFKAEVNGIGQT 556
           + +G G    V+  +          VK          K+       +  F        + 
Sbjct: 6   KLMGEGKESAVFNCYSEKF--GECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARN 63

Query: 557 HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRT--EIAMGIAGGLFY 614
             + L +L G           Y +  N  +   +        ++    E+   I   +  
Sbjct: 64  EFRALQKLQGLAVPKV-----YAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAK 118

Query: 615 LHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEW 674
            +      I+H D+   N+L+ +     I DF  +    + +      +      +   +
Sbjct: 119 FYHRG---IVHGDLSQYNVLVSEE-GIWIIDFPQSV--EVGEEGWREILERDVRNII-TY 171

Query: 675 FRNMPITVKVDVYSYGVLLLE 695
           F       + D+ S    +L+
Sbjct: 172 FSR-TYRTEKDINSAIDRILQ 191

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Length = 109

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

 Score = 58.0 bits (140), Expect = 6e-11
 Identities = 27/123 (21%), Positives = 51/123 (41%), Gaps = 18/123 (14%)

Query: 25  TISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAVNP 84
            ++ G+ L A +S +      + +         +D  L  + Y      T VW ++    
Sbjct: 3   LLTNGEGLYAGQSLD-----VEPYHFIM----QEDCNL--VLYD---HSTSVWASNTGIL 48

Query: 85  APRGSKLRLTANRGLVLEDPEGREIWKSEISTGQAAFG-VLYDTGNFLIVNTNSERLWQS 143
             +G K  L ++   V+ D EGR +W S    G   +  VL + GN +I  ++   +W +
Sbjct: 49  GKKGCKAVLQSDGNFVVYDAEGRSLWASHSVRGNGNYVLVLQEDGNVVIYGSD---IWST 105

Query: 144 FDH 146
             +
Sbjct: 106 GTY 108

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]} Length = 109

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

 Score = 41.9 bits (98), Expect = 2e-05
 Identities = 23/120 (19%), Positives = 39/120 (32%), Gaps = 20/120 (16%)

Query: 149 DTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWSNT 208
           + L   + +  G  +             + F + ED N VL   +        + + SNT
Sbjct: 2   NLLTNGEGLYAGQSLDV---------EPYHFIMQEDCNLVLYDHS-------TSVWASNT 45

Query: 209 FDTNRSNAGYRVVFNESGQLYVLRENKQRASLVPETVSAKENYLRATLNFDGVFIFYSHP 268
                   G + V    G   V+ + + R+     +V    NY    L  DG  + Y   
Sbjct: 46  --GILGKKGCKAVLQSDGNF-VVYDAEGRSLWASHSVRGNGNY-VLVLQEDGNVVIYGSD 101

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 120

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 56.9 bits (137), Expect = 2e-10
 Identities = 22/126 (17%), Positives = 34/126 (26%), Gaps = 26/126 (20%)

Query: 65  IWYYKIPSKTIVWYASAVNPAPRGS-KLRLTANRGLVLEDPEGREIWKSEISTGQAAFGV 123
           I Y    +        A         +L +  +  LVL D + R    +    G     V
Sbjct: 12  ILYSTQGNDNHPQTLHATQSLQLSPYRLSMETDCNLVLFDRDDRVWSTNTAGKGTGCRAV 71

Query: 124 LYDTGNFLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLLE 183
           L   G   ++   +  +W S                             S GR+ F L  
Sbjct: 72  LQPNGRMDVLTNQNIAVWTSG-------------------------NSRSAGRYVFVLQP 106

Query: 184 DGNAVL 189
           D N  +
Sbjct: 107 DRNLAI 112

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Length = 112

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

 Score = 52.1 bits (124), Expect = 7e-09
 Identities = 18/125 (14%), Positives = 39/125 (31%), Gaps = 15/125 (12%)

Query: 25  TISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAVNP 84
            ++ G QL    S          +     Q D        + Y    +   VW +     
Sbjct: 3   RLNSGHQLDTGGS-----LAEGGYLFII-QNDCNL-----VLYD---NNRAVWASGTNGK 48

Query: 85  APRGSKLRLTANRGLVLEDPEGREIWKSEISTGQAAFGVLYDTGNFLIVNTNSERLWQSF 144
           A  G  L++  +  LV+          +        + +L    N +I + ++  +W + 
Sbjct: 49  A-SGCVLKMQNDGNLVIYSGSRAIWASNTNRQNGNYYLILQRDRNVVIYDNSNNAIWATH 107

Query: 145 DHPTD 149
            +  +
Sbjct: 108 TNVGN 112

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]} Length = 112

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

 Score = 52.1 bits (124), Expect = 8e-09
 Identities = 20/132 (15%), Positives = 45/132 (34%), Gaps = 27/132 (20%)

Query: 148 TDTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWSN 207
           +D L     ++ GG ++          G + F +  D N VL        +  +   W++
Sbjct: 1   SDRLNSGHQLDTGGSLAE---------GGYLFIIQNDCNLVL--------YDNNRAVWAS 43

Query: 208 TFDTNRSNAGYRVVFNESGQLYVLRENKQRASLVPETVSAKENYLRATLNFDGVFIFYSH 267
             +   S     +     G L +   ++   +      + +       L  D   + Y  
Sbjct: 44  GTNGKASGC--VLKMQNDGNLVIYSGSRAIWA---SNTNRQNGNYYLILQRDRNVVIY-- 96

Query: 268 PKNNSTGDAIWS 279
              +++ +AIW+
Sbjct: 97  ---DNSNNAIWA 105

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 119

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 50.0 bits (119), Expect = 5e-08
 Identities = 27/139 (19%), Positives = 43/139 (30%), Gaps = 31/139 (22%)

Query: 141 WQSFDHPTDTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAY 200
            Q  D+    L  T+++E             F    ++F +  D N VL           
Sbjct: 7   KQPDDNHPQILHATESLE-----------ILFGTHVYRFIMQTDCNLVLYD-------NN 48

Query: 201 DAYFWSNTFDTNRSNAGYRVVFNESGQLYVLRENKQRASLVPETVSAKENYLRATLNFDG 260
           +  + +N   T     G R V    G   V+  N+              +Y    L  D 
Sbjct: 49  NPIWATN---TGGLGNGCRAVLQPDGV-LVVITNENVTVWQSPVAGKAGHY-VLVLQPDR 103

Query: 261 VFIFYSHPKNNSTGDAIWS 279
             + Y        GDA+W+
Sbjct: 104 NVVIY--------GDALWA 114

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]} Length = 115

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

 Score = 48.4 bits (115), Expect = 1e-07
 Identities = 23/150 (15%), Positives = 38/150 (25%), Gaps = 39/150 (26%)

Query: 65  IWYYKIPSKTIVWYASAVNPAPRGS-KLRLTANRGLVLEDPEGREIWKSEISTGQAAFGV 123
           I +      +      A       S +  + ++  LVL D     +W S  +       V
Sbjct: 3   ILFGLSHEGSHPQTLHAAQSLELSSFRFTMQSDCNLVLFDS-DVRVWASNTAGATGCRAV 61

Query: 124 LYDTGNFLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLLE 183
           L   G  +I+   +   W S                          T  S G +   L  
Sbjct: 62  LQSDGLLVILTAQNTIRWSSG-------------------------TKGSIGNYVLVLQP 96

Query: 184 DGNAVLNTINLESGFAYDAYFWSNTFDTNR 213
           D    +          Y    W +   T+ 
Sbjct: 97  DRTVTI----------YGPGLWDS--GTSN 114

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

 Score = 44.2 bits (104), Expect = 4e-06
 Identities = 22/124 (17%), Positives = 37/124 (29%), Gaps = 21/124 (16%)

Query: 149 DTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWSNT 208
           + L   +T+  G  ++          G F F + ED N VL        +  D   W+  
Sbjct: 2   NILYSGETLSTGEFLNY---------GSFVFIMQEDCNLVL--------YDVDKPIWATN 44

Query: 209 FDTNRSNAGYRVVFNESGQLYVLRENKQRASLVPETVSAKENYLRATLNFDGVFIFYSHP 268
                 +    +     G L V+     +      T     NY    L  D   + Y   
Sbjct: 45  TGGLSRSC--FLSMQTDGNL-VVYNPSNKPIWASNTGGQNGNY-VCILQKDRNVVIYGTD 100

Query: 269 KNNS 272
           +  +
Sbjct: 101 RWAT 104

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]} Length = 108

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

 Score = 42.7 bits (100), Expect = 1e-05
 Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 5/74 (6%)

Query: 74  TIVWYASAVNPAPRGSKLRLTANRGLVLEDPEGREIWKSEIS-TGQAAFGVLYDTGNFLI 132
             +W  +    + R   L +  +  LV+ +P  + IW S           +L    N +I
Sbjct: 38  KPIWATNTGGLS-RSCFLSMQTDGNLVVYNPSNKPIWASNTGGQNGNYVCILQKDRNVVI 96

Query: 133 VNTNSERLWQSFDH 146
             T+    W +  H
Sbjct: 97  YGTD---RWATGTH 107

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	792
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.83
d1xd5a_	112	Gastrodianin (antifungal protein) {Gastrodia elata	99.82
d1kj1a_	109	Lectin (agglutinin) {Garlic (Allium sativum) [TaxI	99.8
d1jpca_	108	Lectin (agglutinin) {Snowdrop (Galanthus nivalis)	99.79
d1dlpa2	120	Fetuin-binding protein Scafet precursor {Bluebell	99.73
d1dlpa1	115	Fetuin-binding protein Scafet precursor {Bluebell	99.65
d1b2pa_	119	Lectin (agglutinin) {Bluebell (Scilla campanulata)	99.54
d1dlpa1	115	Fetuin-binding protein Scafet precursor {Bluebell	99.3
d1dlpa2	120	Fetuin-binding protein Scafet precursor {Bluebell	99.16
d1b2pa_	119	Lectin (agglutinin) {Bluebell (Scilla campanulata)	99.12
d1jpca_	108	Lectin (agglutinin) {Snowdrop (Galanthus nivalis)	99.06
d1kj1a_	109	Lectin (agglutinin) {Garlic (Allium sativum) [TaxI	99.02
d1xd5a_	112	Gastrodianin (antifungal protein) {Gastrodia elata	98.97
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.16
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.5
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	97.09
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	96.57
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	95.67
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	94.26
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	92.52
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	88.34
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	86.64
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	86.46
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	86.18
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	85.42
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	84.95
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	82.56
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	81.76
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	81.57
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	81.37

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.5e-50  Score=421.83  Aligned_cols=269  Identities=26%  Similarity=0.451  Sum_probs=209.6

Q ss_pred             cccCHHHHHHHHhhhh-----------hhcCccccceEEEeeecCCC--ceEEEEEEccccc-ccchHHHHHHHHHhccc
Q 003836          491 RCFTYKELVEVTRGFK-----------EELGRGAFGTVYKGFVNMGS--SNHVAVKKLNSVF-QDSEKEFKAEVNGIGQT  556 (792)
Q Consensus       491 ~~~~~~el~~~~~~~~-----------~~lG~G~~g~Vy~g~~~~~~--~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l  556 (792)
                      ..++|+++.+++.+|.           ++||+|+||+||+|.+....  ...||||++.... ....++|.+|+++|+++
T Consensus         5 d~~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l   84 (299)
T d1jpaa_           5 DPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF   84 (299)
T ss_dssp             CGGGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTC
T ss_pred             CCCCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhC
Confidence            3567778888877764           46999999999999875332  2368999987543 33456899999999999


Q ss_pred             CCCCcccccceeccCCceEEEEEeccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEE
Q 003836          557 HHKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILL  635 (792)
Q Consensus       557 ~h~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl  635 (792)
                      +|||||+++|+|.+++..++||||+++|+|.+++... ..+++.++.+|+.||++||+|||++   +|+||||||+||||
T Consensus        85 ~HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHrDlKp~NILl  161 (299)
T d1jpaa_          85 DHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADM---NYVHRDLAARNILV  161 (299)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEE
T ss_pred             CCCCCccEEEEEeeCCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhC---CCccCccccceEEE
Confidence            9999999999999999999999999999999988775 5689999999999999999999998   99999999999999


Q ss_pred             cCCCCeEEeecCCCccccCCCCCc----cccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhh
Q 003836          636 DDHYNARISDFGLAKLLTLDQSHT----NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKV  710 (792)
Q Consensus       636 ~~~~~~kl~Dfg~a~~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~  710 (792)
                      +.++.+||+|||+++.........    .....||+.|||||.+.+..++.++|||||||++|||+| |+.||.......
T Consensus       162 ~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~  241 (299)
T d1jpaa_         162 NSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD  241 (299)
T ss_dssp             CTTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH
T ss_pred             CCCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHH
Confidence            999999999999999775443322    122457899999999999999999999999999999998 899986543211


Q ss_pred             hhhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCC
Q 003836          711 DKAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEV  779 (792)
Q Consensus       711 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~  779 (792)
                                       +...+........+...++.+.+++.+||+.||++||||+||++.|+++++-
T Consensus       242 -----------------~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~  293 (299)
T d1jpaa_         242 -----------------VINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN  293 (299)
T ss_dssp             -----------------HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             -----------------HHHHHHcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcC
Confidence                             0111112222333445667889999999999999999999999999987653

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.6e-50  Score=413.94  Aligned_cols=253  Identities=25%  Similarity=0.430  Sum_probs=198.1

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      .+.++||+|+||+||+|.+.  +++.||||+++.. ....++|.+|++++++++|||||+++|+|.+.+..++||||+++
T Consensus         8 ~~~~~iG~G~fg~Vy~~~~~--~~~~vAvK~i~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~   84 (263)
T d1sm2a_           8 TFVQEIGSGQFGLVHLGYWL--NKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEH   84 (263)
T ss_dssp             EEEEEEECCSSCCEEEEEET--TTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred             EEEEEEeeCCCeEEEEEEEC--CCCEEEEEEECCC-cCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecCC
Confidence            35678999999999999865  3467999999764 44567899999999999999999999999999999999999999


Q ss_pred             CCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          584 GTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       584 gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      |+|.+++... ..+++..+..|+.|||+||+|||+.   +|+||||||+|||+++++.+||+|||+++............
T Consensus        85 g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~  161 (263)
T d1sm2a_          85 GCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG  161 (263)
T ss_dssp             CBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCTTCSGGGEEECGGGCEEECSCC---------------
T ss_pred             CcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhcc---ceeecccchhheeecCCCCeEecccchheeccCCCceeecc
Confidence            9999998765 5688999999999999999999998   99999999999999999999999999998776554444445


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCH
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV  742 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  742 (792)
                      ..||+.|+|||.+.+..++.++|||||||++|||+|++.|+.......+  .+              ..+........+.
T Consensus       162 ~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~--~~--------------~~i~~~~~~~~p~  225 (263)
T d1sm2a_         162 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--VV--------------EDISTGFRLYKPR  225 (263)
T ss_dssp             ---CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHH--HH--------------HHHHHTCCCCCCT
T ss_pred             eecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHH--HH--------------HHHHhcCCCCCcc
Confidence            6789999999999999999999999999999999996655543222111  00              0111111222233


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          743 TMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       743 ~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                      ..++++.+++.+||+.||++||||+||+++|+++.+
T Consensus       226 ~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~e  261 (263)
T d1sm2a_         226 LASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE  261 (263)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence            445678999999999999999999999999988653

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.3e-49  Score=416.87  Aligned_cols=254  Identities=28%  Similarity=0.410  Sum_probs=214.4

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      ..+.++||+|+||+||+|.+. .+++.||||+++.. ....++|.+|++++++++|||||+++++|.+++..++||||++
T Consensus        19 ~~~~~~iG~G~fg~Vy~a~~~-~~~~~vAvK~i~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~   96 (287)
T d1opja_          19 ITMKHKLGGGQYGEVYEGVWK-KYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT   96 (287)
T ss_dssp             EEEEEETTTTTTSSEEEEEEG-GGTEEEEEEECCTT-CSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             eEEeeEEeeCCCeEEEEEEEC-CCCeEEEEEEECCc-cchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeeccc
Confidence            345678999999999999765 45678999999754 3456789999999999999999999999999999999999999


Q ss_pred             CCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          583 NGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       583 ~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +|+|.+++...  ..+++..+..|+.||++||+|||++   +|+||||||+||||++++.+||+|||+++..........
T Consensus        97 ~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~---~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~  173 (287)
T d1opja_          97 YGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH  173 (287)
T ss_dssp             TCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEE
T ss_pred             CcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHC---CcccCccccCeEEECCCCcEEEccccceeecCCCCceee
Confidence            99999999654  5789999999999999999999998   999999999999999999999999999998765555444


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ....|++.|+|||.+.+..++.|+|||||||++|||++|+.|+........                +...+........
T Consensus       174 ~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~----------------~~~~i~~~~~~~~  237 (287)
T d1opja_         174 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ----------------VYELLEKDYRMER  237 (287)
T ss_dssp             TTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH----------------HHHHHHTTCCCCC
T ss_pred             ccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHH----------------HHHHHhcCCCCCC
Confidence            556689999999999999999999999999999999998887754322111                1112222333334


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      +...++++.+|+.+||+.||++|||++||++.|+.+.
T Consensus       238 ~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~  274 (287)
T d1opja_         238 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  274 (287)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             CccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            4456678999999999999999999999999998764

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-49  Score=410.54  Aligned_cols=251  Identities=29%  Similarity=0.466  Sum_probs=206.7

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.++||+|+||+||+|.+.  +++.||||+++.. ....+.|.+|++++++++|||||+++|++.+ +..++||||++
T Consensus        15 ~~~~~~iG~G~fg~Vy~~~~~--~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey~~   90 (272)
T d1qpca_          15 LKLVERLGAGQFGEVWMGYYN--GHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYME   90 (272)
T ss_dssp             EEEEEEEEEETTEEEEEEEET--TTEEEEEEEECTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCT
T ss_pred             eEEeEEEecCCCcEEEEEEEC--CCCEEEEEEEccC-cCCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEEeCC
Confidence            345678999999999999865  3568999999764 3456789999999999999999999998865 56789999999


Q ss_pred             CCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          583 NGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       583 ~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +|+|.+++...  ..+++..+++|+.||++||.|||++   +|+||||||+||||++++.+||+|||+|+..........
T Consensus        91 ~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~---~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~  167 (272)
T d1qpca_          91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR  167 (272)
T ss_dssp             TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECC
T ss_pred             CCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccchhheeeecccceeeccccceEEccCCccccc
Confidence            99999988654  3589999999999999999999998   999999999999999999999999999998765544445


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ....||+.|+|||.+.+..++.++|||||||++|||+||+.|+.......+  .+              ..+........
T Consensus       168 ~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~--~~--------------~~i~~~~~~~~  231 (272)
T d1qpca_         168 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VI--------------QNLERGYRMVR  231 (272)
T ss_dssp             TTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HH--------------HHHHTTCCCCC
T ss_pred             cccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHH--HH--------------HHHHhcCCCCC
Confidence            556789999999999999999999999999999999997776644322111  00              11111122223


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                      +...++++.+|+.+||+.||++||||+||+++|+..
T Consensus       232 p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~  267 (272)
T d1qpca_         232 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF  267 (272)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhh
Confidence            334556789999999999999999999999999863

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-48  Score=404.63  Aligned_cols=249  Identities=27%  Similarity=0.351  Sum_probs=202.2

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      .+.++||+|+||+||+|... .+++.||||++.... .+..+.+.+|++++++++|||||++++++.+++..+|||||++
T Consensus         8 ~~~~~lG~G~fg~V~~~~~~-~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy~~   86 (271)
T d1nvra_           8 DLVQTLGEGAYGEVQLAVNR-VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS   86 (271)
T ss_dssp             EEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             EEEEEEecCcCeEEEEEEEC-CCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEeccC
Confidence            45578999999999999754 557899999986543 2344679999999999999999999999999999999999999


Q ss_pred             CCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC-Cccc
Q 003836          583 NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS-HTNT  661 (792)
Q Consensus       583 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~-~~~~  661 (792)
                      +|+|.+++.....+++..+..++.||+.||+|||++   +|+||||||+|||+++++.+||+|||+|+....... ....
T Consensus        87 gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~---~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~  163 (271)
T d1nvra_          87 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN  163 (271)
T ss_dssp             TEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCBC
T ss_pred             CCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHc---CCccCcccHHHEEECCCCCEEEccchhheeeccCCcccccc
Confidence            999999998888899999999999999999999998   999999999999999999999999999998754332 2344


Q ss_pred             cccccCCcccccccccCCC-CcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          662 AIRGTKGYVAPEWFRNMPI-TVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~~-~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ...||+.|||||++.+..+ +.++|||||||++|||++|+.||...........  .             ..........
T Consensus       164 ~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~--~-------------~~~~~~~~~~  228 (271)
T d1nvra_         164 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYS--D-------------WKEKKTYLNP  228 (271)
T ss_dssp             CCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHH--H-------------HHTTCTTSTT
T ss_pred             ceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHH--H-------------HhcCCCCCCc
Confidence            5679999999999988776 5789999999999999999999965432211110  0             0001001111


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ....++++.+|+.+||+.||++|||++|+++
T Consensus       229 ~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         229 WKKIDSAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            1223467788999999999999999999976

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-48  Score=406.32  Aligned_cols=248  Identities=29%  Similarity=0.404  Sum_probs=203.4

Q ss_pred             hhcCccccceEEEeeecC-CCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          507 EELGRGAFGTVYKGFVNM-GSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~-~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      ++||+|+||+||+|.+.. ..++.||||+++...  ....++|.+|++++++++|||||+++|+|.+ +..+|||||+++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence            469999999999998753 445789999996532  2335689999999999999999999999965 467899999999


Q ss_pred             CCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc--cc
Q 003836          584 GTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT--NT  661 (792)
Q Consensus       584 gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~--~~  661 (792)
                      |+|.+++.....+++..+.+|+.||++||+|||++   +|+||||||+||||+.++.+||+|||+++.........  ..
T Consensus        92 g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~---~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~  168 (277)
T d1xbba_          92 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT  168 (277)
T ss_dssp             EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC--
T ss_pred             CcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhC---CcccCCCcchhhcccccCcccccchhhhhhcccccccccccc
Confidence            99999999888899999999999999999999998   99999999999999999999999999999775443322  23


Q ss_pred             cccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ...||+.|+|||.+.+..++.++|||||||++|||+| |+.||.......                 +...+........
T Consensus       169 ~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~-----------------~~~~i~~~~~~~~  231 (277)
T d1xbba_         169 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE-----------------VTAMLEKGERMGC  231 (277)
T ss_dssp             --CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-----------------HHHHHHTTCCCCC
T ss_pred             ccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHH-----------------HHHHHHcCCCCCC
Confidence            4568999999999999999999999999999999998 899997543211                 0111111222233


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhcc
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEG  775 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~  775 (792)
                      +...+.++.+|+.+||+.||++|||+++|+++|+.
T Consensus       232 p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~  266 (277)
T d1xbba_         232 PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN  266 (277)
T ss_dssp             CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             CcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhC
Confidence            34456788999999999999999999999998865

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-48  Score=405.53  Aligned_cols=255  Identities=27%  Similarity=0.397  Sum_probs=199.9

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccc--cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV--FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      .+.++||+|+||+||+|+++    ..||||+++..  .....+.|.+|++++++++|||||++++++.+ +..+|||||+
T Consensus        11 ~~~~~lG~G~fg~Vy~~~~~----~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~Ey~   85 (276)
T d1uwha_          11 TVGQRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQWC   85 (276)
T ss_dssp             CCCSEEEECSSCEEEEEESS----SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred             EEEEEEeeCCCcEEEEEEEC----CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEEecC
Confidence            34578999999999999754    25999998643  34456789999999999999999999999865 5689999999


Q ss_pred             cCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC-Cc
Q 003836          582 SNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS-HT  659 (792)
Q Consensus       582 ~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~-~~  659 (792)
                      ++|+|.+++... ..+++..+.+|+.||++||+|||++   +|+||||||+||||+.++.+||+|||+|+....... ..
T Consensus        86 ~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~---~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~  162 (276)
T d1uwha_          86 EGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQ  162 (276)
T ss_dssp             CEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTSSEEECCCCCSCC---------
T ss_pred             CCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcC---CEeccccCHHHEEEcCCCCEEEccccceeeccccCCccc
Confidence            999999999754 5689999999999999999999998   999999999999999999999999999987654332 23


Q ss_pred             cccccccCCccccccccc---CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          660 NTAIRGTKGYVAPEWFRN---MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~---~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                      .....||+.|||||++.+   ..++.++|||||||++|||+||+.||..........   ...........        .
T Consensus       163 ~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~---~~~~~~~~~p~--------~  231 (276)
T d1uwha_         163 FEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII---FMVGRGYLSPD--------L  231 (276)
T ss_dssp             ---CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHH---HHHHHTSCCCC--------G
T ss_pred             ccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHH---HHHhcCCCCCc--------c
Confidence            345679999999999864   458999999999999999999999997543221110   00111111000        0


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                       ...+...++++.+++.+||+.||++|||++||+++|+.+.+
T Consensus       232 -~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~  272 (276)
T d1uwha_         232 -SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR  272 (276)
T ss_dssp             -GGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -hhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence             11223345678899999999999999999999999988753

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-48  Score=398.01  Aligned_cols=249  Identities=24%  Similarity=0.392  Sum_probs=211.2

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCC
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNG  584 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~g  584 (792)
                      |.++||+|+||+||+|+.+  +++.||||+++.. ....++|.+|++++++++||||++++|+|.+++..++||||+++|
T Consensus         8 ~~~~iG~G~fg~Vy~~~~~--~~~~vAvK~l~~~-~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g   84 (258)
T d1k2pa_           8 FLKELGTGQFGVVKYGKWR--GQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANG   84 (258)
T ss_dssp             CCCCCCEETTEEEEEEEET--TTEEEEEEEEESS-SSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCTTE
T ss_pred             EeEEEecCCCeEEEEEEEC--CCCEEEEEEECcC-cCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccCCC
Confidence            5678999999999999874  4678999999864 345678999999999999999999999999999999999999999


Q ss_pred             CccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccccc
Q 003836          585 TVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTAI  663 (792)
Q Consensus       585 sL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  663 (792)
                      +|.+++... ..+++..+.+++.||++||+|||+.   +|+||||||+|||+++++.+||+|||+++.............
T Consensus        85 ~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~---~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~  161 (258)
T d1k2pa_          85 CLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGS  161 (258)
T ss_dssp             EHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCCS
T ss_pred             cHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhc---CcccccccceeEEEcCCCcEEECcchhheeccCCCceeeccc
Confidence            999997654 5688999999999999999999998   999999999999999999999999999987765555555556


Q ss_pred             cccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCH
Q 003836          664 RGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV  742 (792)
Q Consensus       664 ~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  742 (792)
                      .||+.|+|||.+.+..++.|+|||||||++|||+| |+.||........                 ...+........+.
T Consensus       162 ~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~-----------------~~~i~~~~~~~~p~  224 (258)
T d1k2pa_         162 KFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET-----------------AEHIAQGLRLYRPH  224 (258)
T ss_dssp             CCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHH-----------------HHHHHTTCCCCCCT
T ss_pred             CCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHH-----------------HHHHHhCCCCCCcc
Confidence            78999999999999999999999999999999998 7888875532211                 01111122223334


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          743 TMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       743 ~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                      ..++++.+++.+||+.||++|||++||++.|.++
T Consensus       225 ~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~di  258 (258)
T d1k2pa_         225 LASEKVYTIMYSCWHEKADERPTFKILLSNILDV  258 (258)
T ss_dssp             TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHCC
T ss_pred             cccHHHHHHHHHHccCCHhHCcCHHHHHHHhhCC
Confidence            4557889999999999999999999999998653

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-48  Score=404.39  Aligned_cols=263  Identities=25%  Similarity=0.377  Sum_probs=207.6

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      ..+.+.||+|+||+||+|.+..  ++.||||+++.. ....+.|.+|+.++++++|+|||+++|+|.+ +..++||||++
T Consensus        19 ~~i~~~iG~G~fg~Vy~~~~~~--~~~vAiK~l~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~Ey~~   94 (285)
T d1fmka3          19 LRLEVKLGQGCFGEVWMGTWNG--TTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS   94 (285)
T ss_dssp             EEEEEEEEECSSCEEEEEEETT--TEEEEEEECCTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred             EEEeeEEeeCCCeEEEEEEECC--CCEEEEEEECcc-cCCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEEEecC
Confidence            4566789999999999998753  357999999754 4456789999999999999999999999855 56789999999


Q ss_pred             CCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          583 NGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       583 ~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +|+|..++...  ..+++.+++.|+.||++||+|||+.   +|+||||||+||||+.++++||+|||+++..........
T Consensus        95 ~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~---~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~  171 (285)
T d1fmka3          95 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR  171 (285)
T ss_dssp             TCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC----------
T ss_pred             CCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhh---heecccccceEEEECCCCcEEEcccchhhhccCCCceee
Confidence            99999998754  5689999999999999999999998   999999999999999999999999999987765544444


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccC
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMN  740 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  740 (792)
                      ....||+.|+|||.+....++.++|||||||++|||++|+.|+.......+.                ...+........
T Consensus       172 ~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~----------------~~~i~~~~~~~~  235 (285)
T d1fmka3         172 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV----------------LDQVERGYRMPC  235 (285)
T ss_dssp             ----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH----------------HHHHHTTCCCCC
T ss_pred             ccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHH----------------HHHHHhcCCCCC
Confidence            5567999999999999999999999999999999999987776543322111                111111222233


Q ss_pred             CHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCCCCCCCCCCC
Q 003836          741 NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPIPPCPWTL  788 (792)
Q Consensus       741 ~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~~~p~~P~~~  788 (792)
                      +...++++.+++.+||+.||++||||++|+++|+....-..|+.++..
T Consensus       236 ~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~p~~~p~~  283 (285)
T d1fmka3         236 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPGE  283 (285)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCCCCCSC
T ss_pred             CcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCCCCCCCCC
Confidence            445567889999999999999999999999999997665555544433

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-48  Score=404.71  Aligned_cols=258  Identities=25%  Similarity=0.445  Sum_probs=204.0

Q ss_pred             hhhhcCccccceEEEeeecCCC---ceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEe
Q 003836          505 FKEELGRGAFGTVYKGFVNMGS---SNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEF  580 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~---~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~  580 (792)
                      +.++||+|+||+||+|.+....   ...||||++.... .....+|.+|++++++++|||||+++|++.+.+..++||||
T Consensus        11 ~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~e~   90 (283)
T d1mqba_          11 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEY   90 (283)
T ss_dssp             EEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             eeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEEEEe
Confidence            3467999999999999876433   2479999987543 33456799999999999999999999999999999999999


Q ss_pred             ccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC-
Q 003836          581 MSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH-  658 (792)
Q Consensus       581 ~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~-  658 (792)
                      +.+++|.+++... ..+++.++.+++.||+.||+|||+.   +|+||||||+||||+.++.+||+|||+++........ 
T Consensus        91 ~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~---~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~  167 (283)
T d1mqba_          91 MENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAT  167 (283)
T ss_dssp             CTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-----------
T ss_pred             cccCcchhhhhcccccccHHHHHHHHHHHHHhhhhcccc---ccccCccccceEEECCCCeEEEcccchhhcccCCCccc
Confidence            9999999988654 6789999999999999999999998   9999999999999999999999999999976543322 


Q ss_pred             -ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhc
Q 003836          659 -TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLE  737 (792)
Q Consensus       659 -~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  737 (792)
                       ......||+.|+|||.+.+..++.++|||||||++|||++|+.|+.......+                +...+....+
T Consensus       168 ~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~----------------~~~~i~~~~~  231 (283)
T d1mqba_         168 YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE----------------VMKAINDGFR  231 (283)
T ss_dssp             ------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH----------------HHHHHHTTCC
T ss_pred             eEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHH----------------HHHHHhccCC
Confidence             22345689999999999999999999999999999999998777654322211                1111222223


Q ss_pred             ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcCCCC
Q 003836          738 AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVEVPI  781 (792)
Q Consensus       738 ~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~~~~  781 (792)
                      ...+...+.++.+|+.+||+.||++||||+||+++|+.+++.|.
T Consensus       232 ~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~p~  275 (283)
T d1mqba_         232 LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD  275 (283)
T ss_dssp             CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred             CCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhCcc
Confidence            33444556788999999999999999999999999998876553

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9e-48  Score=397.14  Aligned_cols=244  Identities=27%  Similarity=0.362  Sum_probs=205.7

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccc---cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV---FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +.+.+.||+|+||+||+|... .+++.||+|++.+.   .....+.+.+|++++++++|||||++++++.+++..++|||
T Consensus         8 y~i~~~iG~G~fg~Vy~~~~~-~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivmE   86 (263)
T d2j4za1           8 FEIGRPLGKGKFGNVYLAREK-QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILE   86 (263)
T ss_dssp             EEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             eEEEEEEecCCCcEEEEEEEC-CCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEEe
Confidence            445678999999999999754 56789999998643   23446789999999999999999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      |+++|+|.+++.....+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++.....   .
T Consensus        87 y~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~---~  160 (263)
T d2j4za1          87 YAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS---R  160 (263)
T ss_dssp             CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC---C
T ss_pred             ecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeeeeccccceecCCCCEeecccceeeecCCC---c
Confidence            999999999998888899999999999999999999998   9999999999999999999999999999865432   2


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||........   +.             .+...  ...
T Consensus       161 ~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~---~~-------------~i~~~--~~~  222 (263)
T d2j4za1         161 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET---YK-------------RISRV--EFT  222 (263)
T ss_dssp             CEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH---HH-------------HHHTT--CCC
T ss_pred             ccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHH---HH-------------HHHcC--CCC
Confidence            3346799999999999999999999999999999999999999975432211   00             00111  111


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .+...++++.+++.+||+.||++|||++|+++
T Consensus       223 ~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         223 FPDFVTEGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCccCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence            22334567889999999999999999999987

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-47  Score=400.30  Aligned_cols=248  Identities=27%  Similarity=0.376  Sum_probs=203.9

Q ss_pred             hcCccccceEEEeeecC-CCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccCCC
Q 003836          508 ELGRGAFGTVYKGFVNM-GSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSNGT  585 (792)
Q Consensus       508 ~lG~G~~g~Vy~g~~~~-~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~gs  585 (792)
                      +||+|+||+||+|.+.. +++..||||+++... ....++|.+|++++++++|||||+++|+|.+ +..+|||||+++|+
T Consensus        16 ~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE~~~~g~   94 (285)
T d1u59a_          16 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP   94 (285)
T ss_dssp             EEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEE
T ss_pred             EEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEEEeCCCCc
Confidence            49999999999997643 344579999997543 3345789999999999999999999999865 56899999999999


Q ss_pred             ccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC--cccc
Q 003836          586 VASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH--TNTA  662 (792)
Q Consensus       586 L~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~--~~~~  662 (792)
                      |.+++... ..+++..+.+++.||++||+|||++   +|+||||||+||||+.++.+||+|||+++........  ....
T Consensus        95 L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~  171 (285)
T d1u59a_          95 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA  171 (285)
T ss_dssp             HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCS
T ss_pred             HHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCcCchhheeeccCCceeeccchhhhcccccccccccccc
Confidence            99998654 5789999999999999999999998   9999999999999999999999999999987544332  2234


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCC
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNN  741 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  741 (792)
                      ..||+.|+|||.+.+..++.++|||||||++|||+| |+.||........                 ...+........+
T Consensus       172 ~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~-----------------~~~i~~~~~~~~p  234 (285)
T d1u59a_         172 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV-----------------MAFIEQGKRMECP  234 (285)
T ss_dssp             SCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHH-----------------HHHHHTTCCCCCC
T ss_pred             cccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHH-----------------HHHHHcCCCCCCC
Confidence            568999999999999999999999999999999998 8999975432110                 0111112222334


Q ss_pred             HHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          742 VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       742 ~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                      ...+.++.+|+.+||+.||++||||.+|++.|+..
T Consensus       235 ~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~  269 (285)
T d1u59a_         235 PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  269 (285)
T ss_dssp             TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            45567889999999999999999999999988753

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-47  Score=398.96  Aligned_cols=248  Identities=25%  Similarity=0.325  Sum_probs=206.2

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.++||+|+||+||+|.. ..+++.||||++........+.+.+|++++++++|||||++++++.+.+..++||||++
T Consensus        22 Y~~~~~iG~G~fg~Vy~a~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~  100 (293)
T d1yhwa1          22 YTRFEKIGQGASGTVYTAMD-VATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA  100 (293)
T ss_dssp             BCSCEECCCSSSCEEEEEEB-TTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred             cEEEEEEecCcCcEEEEEEE-CCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecC
Confidence            34557899999999999964 45678999999987666667889999999999999999999999999999999999999


Q ss_pred             CCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          583 NGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       583 ~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      +|+|.+++.+ ..+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++.+..... ....
T Consensus       101 gg~L~~~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~-~~~~  175 (293)
T d1yhwa1         101 GGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-KRST  175 (293)
T ss_dssp             TCBHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-CBCC
T ss_pred             CCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCcHHHeEECCCCcEeeccchhheeeccccc-cccc
Confidence            9999998754 4689999999999999999999998   999999999999999999999999999997654332 2344


Q ss_pred             ccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcccCCH
Q 003836          663 IRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAMNNV  742 (792)
Q Consensus       663 ~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  742 (792)
                      ..||+.|+|||++.+..++.++|||||||++|||++|+.||..........   ...    .        ........+.
T Consensus       176 ~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~---~~~----~--------~~~~~~~~~~  240 (293)
T d1yhwa1         176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY---LIA----T--------NGTPELQNPE  240 (293)
T ss_dssp             CCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH---HHH----H--------HCSCCCSSGG
T ss_pred             cccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHH---HHH----h--------CCCCCCCCcc
Confidence            579999999999999999999999999999999999999996543221100   000    0        0011111223


Q ss_pred             HHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          743 TMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       743 ~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ..+.++.+++.+||+.||++|||++|+++
T Consensus       241 ~~s~~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         241 KLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             GSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            34567889999999999999999999986

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-47  Score=397.03  Aligned_cols=245  Identities=27%  Similarity=0.414  Sum_probs=196.8

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceecc----CCceEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDE----GQNRLLV  577 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~----~~~~~lV  577 (792)
                      .|.++||+|+||+||+|... .+++.||+|++....  ....+.+.+|++++++++|||||++++++.+    ....++|
T Consensus        12 ~~~~~iG~G~fg~Vy~~~~~-~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~iv   90 (270)
T d1t4ha_          12 KFDIEIGRGSFKTVYKGLDT-ETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV   90 (270)
T ss_dssp             EEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEEC-CCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEE
Confidence            34568999999999999754 566799999987542  3345679999999999999999999999854    4567899


Q ss_pred             EEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCC--eEecCCCCCcEEEc-CCCCeEEeecCCCccccC
Q 003836          578 YEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQ--IIHCDIKPQNILLD-DHYNARISDFGLAKLLTL  654 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivH~dikp~NILl~-~~~~~kl~Dfg~a~~~~~  654 (792)
                      |||+++|+|.+++.+...+++..+..++.||++||+|||++   +  |+||||||+||||+ +++.+||+|||+++....
T Consensus        91 mE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~---~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~  167 (270)
T d1t4ha_          91 TELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA  167 (270)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred             EeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHC---CCCEEeCCcChhhceeeCCCCCEEEeecCcceeccC
Confidence            99999999999998888899999999999999999999998   6  99999999999996 578999999999986432


Q ss_pred             CCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhc
Q 003836          655 DQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEN  734 (792)
Q Consensus       655 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  734 (792)
                      .   ......||+.|+|||++.+ +++.++|||||||++|||++|+.||........  .     .........      
T Consensus       168 ~---~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~--~-----~~~i~~~~~------  230 (270)
T d1t4ha_         168 S---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ--I-----YRRVTSGVK------  230 (270)
T ss_dssp             T---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH--H-----HHHHTTTCC------
T ss_pred             C---ccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHH--H-----HHHHHcCCC------
Confidence            2   2335679999999999865 699999999999999999999999964322111  0     011111100      


Q ss_pred             hhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          735 DLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       735 ~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                        ....+...++++.+++.+||+.||++|||++|+++
T Consensus       231 --~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         231 --PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             --CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             --CcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence              01111223456889999999999999999999987

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-47  Score=396.44  Aligned_cols=249  Identities=22%  Similarity=0.317  Sum_probs=190.3

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceecc--CCceEEEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDE--GQNRLLVYE  579 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~--~~~~~lV~E  579 (792)
                      .+.+.||+|+||+||+|... .+++.||||++....  ....+.+.+|++++++++|||||++++++.+  .+..++|||
T Consensus         7 ~~~~~iG~G~fg~Vy~~~~~-~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ivmE   85 (269)
T d2java1           7 EVLYTIGTGSYGRCQKIRRK-SDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVME   85 (269)
T ss_dssp             EEEEEEEECSSEEEEEEEET-TTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEEEE
T ss_pred             EEeEEEecCCCeEEEEEEEC-CCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEEEe
Confidence            45578999999999999754 556899999987543  3345678999999999999999999999864  456899999


Q ss_pred             eccCCCccccccC----CCCCchhHHHHHHHHHHHHHHHHhhcc--CCCeEecCCCCCcEEEcCCCCeEEeecCCCcccc
Q 003836          580 FMSNGTVASFLFG----DSKPNWKLRTEIAMGIAGGLFYLHEEC--CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT  653 (792)
Q Consensus       580 ~~~~gsL~~~l~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~  653 (792)
                      |+++|+|.+++..    ...+++..+..++.||+.||.|||++.  ..+|+||||||+||||+.++.+||+|||+++...
T Consensus        86 y~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~  165 (269)
T d2java1          86 YCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN  165 (269)
T ss_dssp             CCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHHC-
T ss_pred             cCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeecc
Confidence            9999999999864    357899999999999999999999972  1249999999999999999999999999999865


Q ss_pred             CCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhh
Q 003836          654 LDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVE  733 (792)
Q Consensus       654 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  733 (792)
                      .... ......||+.|+|||++.+..++.++|||||||++|||+||+.||........   .     .        .+..
T Consensus       166 ~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~---~-----~--------~i~~  228 (269)
T d2java1         166 HDTS-FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL---A-----G--------KIRE  228 (269)
T ss_dssp             -----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---H-----H--------HHHH
T ss_pred             cCCC-ccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHH---H-----H--------HHHc
Confidence            4332 23346799999999999999999999999999999999999999975432210   0     0        0111


Q ss_pred             chhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          734 NDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       734 ~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ... ...+...++++.+|+.+||+.||++|||++|+++
T Consensus       229 ~~~-~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         229 GKF-RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             TCC-CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCC-CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            111 1122334567899999999999999999999987

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-47  Score=408.97  Aligned_cols=263  Identities=21%  Similarity=0.298  Sum_probs=204.2

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +.+.++||+|+||+||+|.. ..+++.||+|+++... ....+.+.+|+.++++++|||||+++++|.+.++.++||||+
T Consensus         8 y~~~~~iG~G~fg~V~~~~~-~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy~   86 (322)
T d1s9ja_           8 FEKISELGAGNGGVVFKVSH-KPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM   86 (322)
T ss_dssp             EEEEEEEECCSSCCEEEEEE-TTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             CEEEEEEecCCCeEEEEEEE-CCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            34457899999999999975 4567899999987543 334568999999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      ++|+|.+++.+...+++..+..++.||+.||.|||++  .+|+||||||+||||++++.+||+|||+|+......   ..
T Consensus        87 ~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~--~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~---~~  161 (322)
T d1s9ja_          87 DGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM---AN  161 (322)
T ss_dssp             TTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHT---C-
T ss_pred             CCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHh--CCEEccccCHHHeeECCCCCEEEeeCCCccccCCCc---cc
Confidence            9999999998888899999999999999999999973  189999999999999999999999999998764322   23


Q ss_pred             cccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHH---------------------
Q 003836          662 AIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAY---------------------  720 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~---------------------  720 (792)
                      ...||+.|+|||++.+..++.++||||+||++|||++|+.||.................                     
T Consensus       162 ~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (322)
T d1s9ja_         162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYG  241 (322)
T ss_dssp             --CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC--------------------------
T ss_pred             cccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccc
Confidence            45799999999999999999999999999999999999999975432211100000000                     


Q ss_pred             -HhhcccchhHhhhchh----cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          721 -DRYQERTLEALVENDL----EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       721 -~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                       .........+..+...    ........+.++.+++.+||+.||++|||++|+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~  297 (322)
T d1s9ja_         242 MDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV  297 (322)
T ss_dssp             ----CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence             0000000111111100    00111123467889999999999999999999987

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-47  Score=405.96  Aligned_cols=254  Identities=26%  Similarity=0.356  Sum_probs=206.4

Q ss_pred             hhhhhhcCccccceEEEeeecCC----CceEEEEEEcccc-cccchHHHHHHHHHhccc-CCCCcccccceeccCCceEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMG----SSNHVAVKKLNSV-FQDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLL  576 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~----~~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~l  576 (792)
                      ..+.++||+|+||+||+|.....    ....||||++... .......+.+|+.++.++ +|||||++++++.+.+..++
T Consensus        39 ~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~l  118 (325)
T d1rjba_          39 LEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYL  118 (325)
T ss_dssp             EEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             eEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeEEE
Confidence            34568899999999999986432    2347999998653 334456899999999998 89999999999999999999


Q ss_pred             EEEeccCCCccccccCCC-----------------------CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcE
Q 003836          577 VYEFMSNGTVASFLFGDS-----------------------KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNI  633 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~~-----------------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NI  633 (792)
                      ||||+++|+|.++|+...                       .+++..++.|+.||++||+|||++   +|+||||||+||
T Consensus       119 v~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~---~IiHRDlKp~Ni  195 (325)
T d1rjba_         119 IFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNV  195 (325)
T ss_dssp             EEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSGGGE
T ss_pred             EEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCchhcc
Confidence            999999999999996542                       478899999999999999999998   999999999999


Q ss_pred             EEcCCCCeEEeecCCCccccCCCCCc-cccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhh
Q 003836          634 LLDDHYNARISDFGLAKLLTLDQSHT-NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVD  711 (792)
Q Consensus       634 Ll~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~  711 (792)
                      |++.++.+||+|||+|+......... .....||+.|||||.+.+..++.++|||||||++|||+| |+.||........
T Consensus       196 ll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~  275 (325)
T d1rjba_         196 LVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN  275 (325)
T ss_dssp             EEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH
T ss_pred             ccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHH
Confidence            99999999999999998765544332 234568999999999999999999999999999999998 8999865432211


Q ss_pred             hhhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhcc
Q 003836          712 KAILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEG  775 (792)
Q Consensus       712 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~  775 (792)
                                      +..++........+...++++.+|+.+||+.||++|||++||+++|..
T Consensus       276 ----------------~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~  323 (325)
T d1rjba_         276 ----------------FYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGC  323 (325)
T ss_dssp             ----------------HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ----------------HHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHhC
Confidence                            111222222333344556789999999999999999999999999963

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-47  Score=398.39  Aligned_cols=246  Identities=20%  Similarity=0.275  Sum_probs=202.8

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccc---cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV---FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +.+.+.||+|+||+||+|... .+++.||||++.+.   .....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus        10 y~i~~~lG~G~fg~Vy~a~~~-~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmE   88 (288)
T d1uu3a_          10 FKFGKILGEGSFSTVVLAREL-ATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLS   88 (288)
T ss_dssp             EEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEEC
T ss_pred             CEEEEEEeeCCCeEEEEEEEC-CCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEEE
Confidence            446688999999999999754 45789999998653   23345789999999999999999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC-C
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS-H  658 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~-~  658 (792)
                      |+++|+|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||+++++.+||+|||+|+.+..... .
T Consensus        89 y~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~  165 (288)
T d1uu3a_          89 YAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA  165 (288)
T ss_dssp             CCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECC------
T ss_pred             ccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccc---cEEcCcCCccccccCCCceEEecccccceecccCCccc
Confidence            999999999998888999999999999999999999999   999999999999999999999999999998754332 2


Q ss_pred             ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          659 TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      ......||+.|+|||++.+..++.++|||||||++|||++|+.||........   .             ..+....  .
T Consensus       166 ~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~---~-------------~~i~~~~--~  227 (288)
T d1uu3a_         166 RANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI---F-------------QKIIKLE--Y  227 (288)
T ss_dssp             ----CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---H-------------HHHHTTC--C
T ss_pred             ccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHH---H-------------HHHHcCC--C
Confidence            33456799999999999999999999999999999999999999975432111   0             0011111  1


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHHhHH
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVT  770 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl  770 (792)
                      ..+...++++.+|+.+||+.||++|||++|++
T Consensus       228 ~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~  259 (288)
T d1uu3a_         228 DFPEKFFPKARDLVEKLLVLDATKRLGCEEME  259 (288)
T ss_dssp             CCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGT
T ss_pred             CCCccCCHHHHHHHHHHccCCHhHCcCHHHHc
Confidence            12233456788999999999999999999864

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-47  Score=398.83  Aligned_cols=247  Identities=24%  Similarity=0.340  Sum_probs=203.7

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEeccC
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMSN  583 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~~  583 (792)
                      .+.+.||+|+||+||+|... .+++.||||++........+.+.+|++++++++|||||++++++.+.+..+|||||+++
T Consensus        15 ~i~~~iG~G~fg~Vy~~~~~-~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~~   93 (288)
T d2jfla1          15 EIIGELGDGAFGKVYKAQNK-ETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG   93 (288)
T ss_dssp             EEEEEEEEETTEEEEEEEET-TTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred             EEeEEEeeCCCcEEEEEEEC-CCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCCC
Confidence            44578999999999999754 56789999999876666778899999999999999999999999999999999999999


Q ss_pred             CCccccccC-CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcccc
Q 003836          584 GTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNTA  662 (792)
Q Consensus       584 gsL~~~l~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~~  662 (792)
                      |+|.+++.+ ...+++..+..++.||+.||.|||++   +|+||||||+|||++.++.+||+|||+|+...... .....
T Consensus        94 g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~---~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~-~~~~~  169 (288)
T d2jfla1          94 GAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI-QRRDS  169 (288)
T ss_dssp             EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECHHHH-HHHTC
T ss_pred             CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEEeecChhheeECCCCCEEEEechhhhccCCCc-ccccc
Confidence            999999765 45689999999999999999999999   99999999999999999999999999997653221 12234


Q ss_pred             ccccCCcccccccc-----cCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch-h
Q 003836          663 IRGTKGYVAPEWFR-----NMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND-L  736 (792)
Q Consensus       663 ~~gt~~y~aPE~~~-----~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  736 (792)
                      ..||+.|+|||++.     +..++.++|||||||++|||++|+.||........   +..             +.... .
T Consensus       170 ~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~---~~~-------------i~~~~~~  233 (288)
T d2jfla1         170 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRV---LLK-------------IAKSEPP  233 (288)
T ss_dssp             CCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH---HHH-------------HHHSCCC
T ss_pred             cccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHH---HHH-------------HHcCCCC
Confidence            56999999999984     45689999999999999999999999975432211   100             11110 0


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ....+...++++.+|+.+||+.||++|||++|+++
T Consensus       234 ~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         234 TLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             CCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CCCccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            11122344567889999999999999999999987

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.5e-46  Score=396.97  Aligned_cols=248  Identities=24%  Similarity=0.344  Sum_probs=190.2

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +.+.+.||+|+||+||+|... .+++.||||++.... ....+.+.+|++++++++|||||++++++.+++..+|||||+
T Consensus        11 Y~~~~~lG~G~fg~Vy~~~~~-~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~   89 (307)
T d1a06a_          11 YDFRDVLGTGAFSEVILAEDK-RTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLV   89 (307)
T ss_dssp             EEEEEESBSGGGGGEEEEEET-TTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             eEEEEEEeeccCeEEEEEEEC-CCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence            456688999999999999754 567899999987543 334567889999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEc---CCCCeEEeecCCCccccCCCCC
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLD---DHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~---~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      ++|+|.+++.....+++..+..++.||+.||+|||++   +|+||||||+|||+.   +++.+||+|||+++......  
T Consensus        90 ~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~--  164 (307)
T d1a06a_          90 SGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS--  164 (307)
T ss_dssp             CSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCC------------
T ss_pred             CCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhc---eeeeEEecccceeecccCCCceEEEeccceeEEccCCC--
Confidence            9999999998888899999999999999999999998   999999999999995   57899999999998654322  


Q ss_pred             ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch--h
Q 003836          659 TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND--L  736 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  736 (792)
                      ......||+.|||||++.+..++.++|||||||++|||++|+.||.........                ..+....  .
T Consensus       165 ~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~----------------~~i~~~~~~~  228 (307)
T d1a06a_         165 VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLF----------------EQILKAEYEF  228 (307)
T ss_dssp             --------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH----------------HHHHTTCCCC
T ss_pred             eeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHH----------------HHHhccCCCC
Confidence            233467999999999999999999999999999999999999999754322110                0011111  1


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ........++++.+++.+||+.||++|||++|+++.
T Consensus       229 ~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  264 (307)
T d1a06a_         229 DSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQH  264 (307)
T ss_dssp             CTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             CCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence            111122345678999999999999999999999983

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2e-46  Score=396.06  Aligned_cols=244  Identities=25%  Similarity=0.312  Sum_probs=201.1

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccc---cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ---DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +...++||+|+||+||+|... .+++.||||++.....   ...+.+.+|++++++++|||||++++++.+++..++|||
T Consensus        17 y~~l~~lG~G~fg~Vy~a~~~-~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E   95 (309)
T d1u5ra_          17 FSDLREIGHGSFGAVYFARDV-RNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (309)
T ss_dssp             EEEEEEEEECSSSEEEEEEET-TTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cEeeEEEecCCCeEEEEEEEC-CCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEE
Confidence            444578999999999999754 5678999999875432   234578999999999999999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      |+++|+|..++..+..+++..+..++.||+.||.|||++   +|+||||||+||||+.++.+||+|||+++....     
T Consensus        96 ~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~-----  167 (309)
T d1u5ra_          96 YCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-----  167 (309)
T ss_dssp             CCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS-----
T ss_pred             ecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEECCCCCEEEeecccccccCC-----
Confidence            999999988877778899999999999999999999999   999999999999999999999999999986543     


Q ss_pred             cccccccCCccccccccc---CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          660 NTAIRGTKGYVAPEWFRN---MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~---~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                      .....||+.|||||++.+   ..++.++|||||||++|||++|+.||........   +             ..+.....
T Consensus       168 ~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~---~-------------~~i~~~~~  231 (309)
T d1u5ra_         168 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA---L-------------YHIAQNES  231 (309)
T ss_dssp             BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH---H-------------HHHHHSCC
T ss_pred             CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHH---H-------------HHHHhCCC
Confidence            234569999999999864   4689999999999999999999999965432111   0             01111111


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ....+...++++.+|+.+||+.||++|||++|+++
T Consensus       232 ~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         232 PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             CCCSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CCCCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence            11112234567889999999999999999999976

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-46  Score=395.06  Aligned_cols=256  Identities=24%  Similarity=0.414  Sum_probs=205.9

Q ss_pred             hhhhhcCccccceEEEeeecCCC--ceEEEEEEcccc-cccchHHHHHHHHHhcccCCCCcccccceecc-CCceEEEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGS--SNHVAVKKLNSV-FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDE-GQNRLLVYE  579 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~--~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~-~~~~~lV~E  579 (792)
                      +|.++||+|+||+||+|.+...+  ...||||+++.. .....++|.+|++++++++||||++++|++.+ +...++|||
T Consensus        30 ~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E  109 (311)
T d1r0pa_          30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP  109 (311)
T ss_dssp             EEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEE
T ss_pred             ccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEE
Confidence            45678999999999999875433  346899999753 33445789999999999999999999999865 457899999


Q ss_pred             eccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          580 FMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       580 ~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      |+++|+|.+++... ...++..+++++.|+++||.|||+.   +|+||||||+||||++++.+||+|||+++........
T Consensus       110 ~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~---~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~  186 (311)
T d1r0pa_         110 YMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD  186 (311)
T ss_dssp             CCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCC
T ss_pred             EeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhccc---CcccCCccHHhEeECCCCCEEEecccchhhccccccc
Confidence            99999999998765 4678889999999999999999998   9999999999999999999999999999977544332


Q ss_pred             ---ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          659 ---TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       659 ---~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                         ......||+.|+|||.+....++.++||||||+++|||+||+.||.......+..                ..+...
T Consensus       187 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~----------------~~i~~g  250 (311)
T d1r0pa_         187 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT----------------VYLLQG  250 (311)
T ss_dssp             CTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CH----------------HHHHTT
T ss_pred             cceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHH----------------HHHHcC
Confidence               2234568999999999999999999999999999999999998886543221110                001111


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                      .+...+...+.++.+++.+||+.||++||+|.||+++|+++..
T Consensus       251 ~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~  293 (311)
T d1r0pa_         251 RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS  293 (311)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            1122233345678899999999999999999999999988753

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.8e-46  Score=395.17  Aligned_cols=255  Identities=23%  Similarity=0.357  Sum_probs=207.0

Q ss_pred             hhhhhcCccccceEEEeeecC----CCceEEEEEEccccccc-chHHHHHHHHHhcccCCCCcccccceeccCCceEEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNM----GSSNHVAVKKLNSVFQD-SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~----~~~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~  578 (792)
                      .+.++||+|+||+||+|+...    .+++.||||+++..... ..++|.+|++++++++||||++++++|.+.+..++||
T Consensus        16 ~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~v~   95 (301)
T d1lufa_          16 EYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLF   95 (301)
T ss_dssp             EEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             EEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceEEEE
Confidence            345789999999999998642    34578999999764333 3567999999999999999999999999999999999


Q ss_pred             EeccCCCccccccCC------------------------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEE
Q 003836          579 EFMSNGTVASFLFGD------------------------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNIL  634 (792)
Q Consensus       579 E~~~~gsL~~~l~~~------------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NIL  634 (792)
                      ||+++|+|.+++...                        ..+++..++.|+.||+.||+|||++   +|+||||||+|||
T Consensus        96 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~---~ivHrDlKp~NIL  172 (301)
T d1lufa_          96 EYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCL  172 (301)
T ss_dssp             ECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred             EecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccC---CeEeeEEcccceE
Confidence            999999999998632                        2378889999999999999999998   9999999999999


Q ss_pred             EcCCCCeEEeecCCCccccCCCCC-ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCc-CCCcchhhhhh
Q 003836          635 LDDHYNARISDFGLAKLLTLDQSH-TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRR-NIDNEISKVDK  712 (792)
Q Consensus       635 l~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~-p~~~~~~~~~~  712 (792)
                      |+.++.+||+|||+++........ ......|++.|+|||.+.+..++.|+|||||||++|||++|.. ||........ 
T Consensus       173 ld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~-  251 (301)
T d1lufa_         173 VGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEV-  251 (301)
T ss_dssp             ECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-
T ss_pred             ECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHHH-
Confidence            999999999999999876543332 2334668999999999999999999999999999999999975 5554322111 


Q ss_pred             hhHHHHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          713 AILTDWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                        .             ..+. .......+...+.++.+|+.+||+.+|++||||.||+++|+++.+
T Consensus       252 --~-------------~~v~-~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~~  301 (301)
T d1lufa_         252 --I-------------YYVR-DGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE  301 (301)
T ss_dssp             --H-------------HHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             --H-------------HHHH-cCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence              0             0111 111122333455688999999999999999999999999998864

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=1.1e-45  Score=397.00  Aligned_cols=250  Identities=23%  Similarity=0.340  Sum_probs=206.1

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.+.||+|+||+||+|... .+++.||||++........+.+.+|++++++++|||||++++++.+.+..+|||||++
T Consensus        28 Y~i~~~lG~G~fg~Vy~~~~~-~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~  106 (350)
T d1koaa2          28 YDIHEELGTGAFGVVHRVTER-ATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMS  106 (350)
T ss_dssp             EEEEEEEEEETTEEEEEEEET-TTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred             eEEEEEEecCcCeEEEEEEEC-CCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCC
Confidence            456688999999999999753 5678999999987666667789999999999999999999999999999999999999


Q ss_pred             CCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEc--CCCCeEEeecCCCccccCCCCCc
Q 003836          583 NGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLD--DHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       583 ~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~--~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      +|+|.+++... ..+++..+..|+.||+.||+|||++   +|+||||||+|||++  .++.+||+|||+++.....  ..
T Consensus       107 gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~--~~  181 (350)
T d1koaa2         107 GGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK--QS  181 (350)
T ss_dssp             SCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTT--SC
T ss_pred             CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhc---CCeeeeechhHeeeccCCCCeEEEeecchheecccc--cc
Confidence            99999998644 5799999999999999999999999   999999999999996  4678999999999876533  23


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      .....||+.|||||++.+..++.++|||||||++|||++|+.||........   +........           .....
T Consensus       182 ~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~---~~~i~~~~~-----------~~~~~  247 (350)
T d1koaa2         182 VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET---LRNVKSCDW-----------NMDDS  247 (350)
T ss_dssp             EEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHHTCC-----------CSCCG
T ss_pred             cceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHH---HHHHHhCCC-----------CCCcc
Confidence            3456799999999999999999999999999999999999999975432211   111000000           00011


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .....++++.+|+.+||+.||++|||++|+++.
T Consensus       248 ~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  280 (350)
T d1koaa2         248 AFSGISEDGKDFIRKLLLADPNTRMTIHQALEH  280 (350)
T ss_dssp             GGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred             cccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            112235678899999999999999999999984

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-46  Score=392.02  Aligned_cols=254  Identities=22%  Similarity=0.308  Sum_probs=195.5

Q ss_pred             hhhhhhcCccccceEEEeeecCC--CceEEEEEEccccccc-chHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMG--SSNHVAVKKLNSVFQD-SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~--~~~~vavK~~~~~~~~-~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +.+.+.||+|+||.||+|.....  ....||||+++..... ..+.|.+|++++++++|||||++++++.+ +..++|||
T Consensus         9 ~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~iv~E   87 (273)
T d1mp8a_           9 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIME   87 (273)
T ss_dssp             EEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred             eEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CeEEEEEE
Confidence            44567899999999999976533  2457899998754333 35679999999999999999999999964 67899999


Q ss_pred             eccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          580 FMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       580 ~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      |+++|+|.+++... ..+++..++.++.||++||.|||+.   +|+||||||+|||+++++.+||+|||+++........
T Consensus        88 ~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~  164 (273)
T d1mp8a_          88 LCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY  164 (273)
T ss_dssp             CCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-------------
T ss_pred             eccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhccc---CeeccccchhheeecCCCcEEEccchhheeccCCcce
Confidence            99999999987654 5789999999999999999999999   9999999999999999999999999999987655544


Q ss_pred             ccccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhc
Q 003836          659 TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLE  737 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  737 (792)
                      ......||+.|+|||.+.+..++.++|||||||++|||++ |..||........   .              ..+.....
T Consensus       165 ~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~---~--------------~~i~~~~~  227 (273)
T d1mp8a_         165 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV---I--------------GRIENGER  227 (273)
T ss_dssp             ------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH---H--------------HHHHTTCC
T ss_pred             eccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHH---H--------------HHHHcCCC
Confidence            5555678999999999999999999999999999999998 7888865432211   0              00111111


Q ss_pred             ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          738 AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       738 ~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      ...+...++++.+|+.+||+.||++|||++||++.|+.++
T Consensus       228 ~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~  267 (273)
T d1mp8a_         228 LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL  267 (273)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            2233445678899999999999999999999999998764

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-45  Score=388.09  Aligned_cols=249  Identities=25%  Similarity=0.343  Sum_probs=203.9

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc------ccchHHHHHHHHHhcccCCCCcccccceeccCCceEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF------QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLL  576 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~------~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~l  576 (792)
                      +.+.++||+|+||+||+|... .+++.||||++.+..      ....+.+.+|++++++++|||||++++++.+.+..+|
T Consensus        12 Y~~~~~lG~G~fg~Vy~~~~~-~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i   90 (293)
T d1jksa_          12 YDTGEELGSGQFAVVKKCREK-STGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVIL   90 (293)
T ss_dssp             EEEEEEEEECSSEEEEEEEET-TTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             EEEeEEEecCCCeEEEEEEEC-CCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            455688999999999999753 567899999986432      1235789999999999999999999999999999999


Q ss_pred             EEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCC----CeEEeecCCCccc
Q 003836          577 VYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY----NARISDFGLAKLL  652 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~----~~kl~Dfg~a~~~  652 (792)
                      ||||+++|+|.+++.....+++..+..++.||+.||+|||+.   +|+||||||+|||++.++    .+||+|||+++..
T Consensus        91 v~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~---~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~  167 (293)
T d1jksa_          91 ILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI  167 (293)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred             EEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhc---ceeecccccceEEEecCCCcccceEecchhhhhhc
Confidence            999999999999998888899999999999999999999999   999999999999998776    4999999999876


Q ss_pred             cCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhh
Q 003836          653 TLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALV  732 (792)
Q Consensus       653 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  732 (792)
                      ....  ......||+.|+|||++.+..++.++|||||||++|||++|+.||........   +...     ....     
T Consensus       168 ~~~~--~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~---~~~i-----~~~~-----  232 (293)
T d1jksa_         168 DFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET---LANV-----SAVN-----  232 (293)
T ss_dssp             TTSC--BCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHH-----HTTC-----
T ss_pred             CCCc--cccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHH---HHHH-----HhcC-----
Confidence            4332  23345689999999999999999999999999999999999999975432211   0000     0000     


Q ss_pred             hchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          733 ENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       733 ~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                       ...........+.++.+|+.+||+.||++|||++|+++
T Consensus       233 -~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         233 -YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             -CCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             -CCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence             00000011123467889999999999999999999987

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=3.2e-45  Score=393.81  Aligned_cols=248  Identities=24%  Similarity=0.323  Sum_probs=206.8

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      +.+.++||+|+||+||+|.. ..+++.||||+++.......+.+.+|++++++++|||||++++++.+++..+|||||++
T Consensus        31 Y~i~~~lG~G~fg~V~~a~~-~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~  109 (352)
T d1koba_          31 YDILEELGSGAFGVVHRCVE-KATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLS  109 (352)
T ss_dssp             EEEEEEEEEETTEEEEEEEE-TTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCC
T ss_pred             eEEEEEEecCCCeEEEEEEE-CCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCC
Confidence            45668899999999999975 35678999999987655566789999999999999999999999999999999999999


Q ss_pred             CCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEc--CCCCeEEeecCCCccccCCCCCc
Q 003836          583 NGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLD--DHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       583 ~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~--~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      +|+|.+++... ..+++..+..|+.||+.||+|||+.   +|+||||||+||||+  .++.+||+|||+|+......  .
T Consensus       110 gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~--~  184 (352)
T d1koba_         110 GGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE--I  184 (352)
T ss_dssp             CCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS--C
T ss_pred             CChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccccccccccccCCCeEEEeecccceecCCCC--c
Confidence            99999887655 4699999999999999999999998   999999999999998  67899999999999875432  3


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch--hc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND--LE  737 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  737 (792)
                      .....||+.|+|||++.+..++.++|||||||++|||+||+.||........   +             ..+....  ..
T Consensus       185 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~---~-------------~~i~~~~~~~~  248 (352)
T d1koba_         185 VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLET---L-------------QNVKRCDWEFD  248 (352)
T ss_dssp             EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH---H-------------HHHHHCCCCCC
T ss_pred             eeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH---H-------------HHHHhCCCCCC
Confidence            3446789999999999999999999999999999999999999975432211   0             0011111  11


Q ss_pred             ccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          738 AMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       738 ~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      .......+.++.+|+.+||+.||.+|||++|+++.
T Consensus       249 ~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~H  283 (352)
T d1koba_         249 EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH  283 (352)
T ss_dssp             SSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             cccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            11122345678899999999999999999999874

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.9e-46  Score=383.23  Aligned_cols=245  Identities=27%  Similarity=0.376  Sum_probs=194.9

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceecc-CCceEEEEEecc
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDE-GQNRLLVYEFMS  582 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~-~~~~~lV~E~~~  582 (792)
                      .+.+.||+|+||.||+|.+.   ++.||||++++.  ...+.|.+|++++++++||||++++|+|.+ .+..++||||++
T Consensus        10 ~~~~~lG~G~fg~Vy~~~~~---~~~vAvK~i~~~--~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~   84 (262)
T d1byga_          10 KLLQTIGKGEFGDVMLGDYR---GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA   84 (262)
T ss_dssp             EEEEEEEECSSCEEEEEEET---TEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCT
T ss_pred             EEeEEEecCCCeEEEEEEEC---CeEEEEEEECcH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccC
Confidence            35678999999999999874   468999999753  445789999999999999999999999865 456899999999


Q ss_pred             CCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCcc
Q 003836          583 NGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTN  660 (792)
Q Consensus       583 ~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~  660 (792)
                      +|+|.++|...  ..+++..+++|+.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++.....    .
T Consensus        85 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~----~  157 (262)
T d1byga_          85 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----Q  157 (262)
T ss_dssp             TEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC------------
T ss_pred             CCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccC---ceeccccchHhheecCCCCEeecccccceecCCC----C
Confidence            99999999754  3589999999999999999999998   9999999999999999999999999999865432    2


Q ss_pred             ccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          661 TAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       661 ~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      ....+++.|+|||.+.+..++.++|||||||++|||+| |+.|+.......                 +...+....+.+
T Consensus       158 ~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~-----------------~~~~i~~~~~~~  220 (262)
T d1byga_         158 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-----------------VVPRVEKGYKMD  220 (262)
T ss_dssp             ----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG-----------------HHHHHTTTCCCC
T ss_pred             ccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHH-----------------HHHHHHcCCCCC
Confidence            23457889999999999999999999999999999998 566665432211                 111111222333


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      .+...++++.+|+.+||+.||.+||||.||+++|+.+.
T Consensus       221 ~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~  258 (262)
T d1byga_         221 APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK  258 (262)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence            44455678899999999999999999999999998753

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7e-46  Score=385.56  Aligned_cols=252  Identities=25%  Similarity=0.327  Sum_probs=196.3

Q ss_pred             hhhhhcCccccceEEEeeecCCC--ceEEEEEEcccc---cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGS--SNHVAVKKLNSV---FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~--~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~  578 (792)
                      .+.+.||+|+||+||+|++...+  ...||||++.+.   .....++|.+|++++++++|||||+++|+|.+ +..++||
T Consensus        11 ~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~lv~   89 (273)
T d1u46a_          11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVT   89 (273)
T ss_dssp             EEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred             EEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchheee
Confidence            45678999999999999875433  357999998753   23345689999999999999999999999976 4678999


Q ss_pred             EeccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC
Q 003836          579 EFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       579 E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      ||+++|+|.+++... ..+++..+++++.||++||.|||++   +|+||||||+||||+.++.+||+|||+++.......
T Consensus        90 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~  166 (273)
T d1u46a_          90 ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD  166 (273)
T ss_dssp             ECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CC
T ss_pred             eeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhC---CEeeeeecHHHhccccccceeeccchhhhhcccCCC
Confidence            999999999887654 5689999999999999999999998   999999999999999999999999999998754433


Q ss_pred             Cc--cccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhc
Q 003836          658 HT--NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEN  734 (792)
Q Consensus       658 ~~--~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  734 (792)
                      ..  .....|+..|+|||.+.+..++.++|||||||++|||+| |+.||........                +..+...
T Consensus       167 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~----------------~~~i~~~  230 (273)
T d1u46a_         167 HYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI----------------LHKIDKE  230 (273)
T ss_dssp             EEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH----------------HHHHHTS
T ss_pred             cceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHH----------------HHHHHhC
Confidence            22  233567889999999999999999999999999999998 8999865432211                1111122


Q ss_pred             hhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhcc
Q 003836          735 DLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEG  775 (792)
Q Consensus       735 ~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~  775 (792)
                      ......+...+..+.+++.+||+.||++||||+||++.|++
T Consensus       231 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~  271 (273)
T d1u46a_         231 GERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLE  271 (273)
T ss_dssp             CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence            22222333455678999999999999999999999999875

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-45  Score=389.90  Aligned_cols=247  Identities=23%  Similarity=0.267  Sum_probs=207.0

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccc---cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV---FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +.+.+.||+|+||.||+++. ..+++.||||++++.   .....+.+.+|+.+|++++||||+++++++.+.+..++|||
T Consensus         7 y~~~~~lG~G~fg~V~~~~~-~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~e   85 (337)
T d1o6la_           7 FDYLKLLGKGTFGKVILVRE-KATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVME   85 (337)
T ss_dssp             EEEEEEEEECSSEEEEEEEE-TTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cEEEEEEecCcCeEEEEEEE-CCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeecccccccccee
Confidence            34567899999999999975 456789999999753   23446789999999999999999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      |+++|+|.+++.....+++.....++.||+.||+|||++   +|+||||||+|||+++++.+||+|||+|+...... ..
T Consensus        86 y~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~-~~  161 (337)
T d1o6la_          86 YANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-AT  161 (337)
T ss_dssp             CCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT-CC
T ss_pred             ccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhc---CccccccCHHHeEecCCCCEEEeecccccccccCC-cc
Confidence            999999999999888899999999999999999999999   99999999999999999999999999998764332 23


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      ....+||+.|+|||++.+..++.++|||||||++|||++|+.||........   .             ..+....  ..
T Consensus       162 ~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~---~-------------~~i~~~~--~~  223 (337)
T d1o6la_         162 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL---F-------------ELILMEE--IR  223 (337)
T ss_dssp             BCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH---H-------------HHHHHCC--CC
T ss_pred             cccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHH---H-------------HHHhcCC--CC
Confidence            3456799999999999999999999999999999999999999976533211   0             0111111  11


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCCC-----HHhHHHH
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRPT-----MRKVTQM  772 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RPs-----~~evl~~  772 (792)
                      .+...+.++.+|+.+||+.||++||+     ++|+++.
T Consensus       224 ~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~H  261 (337)
T d1o6la_         224 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             CCccCCHHHHHHHHhhccCCchhhcccccccHHHHHcC
Confidence            23345567889999999999999995     7888763

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-45  Score=390.04  Aligned_cols=252  Identities=27%  Similarity=0.424  Sum_probs=202.1

Q ss_pred             hhhhcCccccceEEEeeecCCCc-eEEEEEEcccc-cccchHHHHHHHHHhccc-CCCCcccccceeccCCceEEEEEec
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSS-NHVAVKKLNSV-FQDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~-~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +.++||+|+||+||+|.+..... ..||||++... .....+.|.+|++++.++ +|||||+++|+|.+.+..++||||+
T Consensus        14 ~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~ey~   93 (309)
T d1fvra_          14 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA   93 (309)
T ss_dssp             EEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             EEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEEEEec
Confidence            45789999999999998764332 36889988643 334556899999999998 7999999999999999999999999


Q ss_pred             cCCCccccccCC----------------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEee
Q 003836          582 SNGTVASFLFGD----------------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISD  645 (792)
Q Consensus       582 ~~gsL~~~l~~~----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~D  645 (792)
                      ++|+|.++|+..                ..+++..+.+++.||++||.|||+.   +|+||||||+|||++.++.+||+|
T Consensus        94 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~---~iiHrDlkp~NIL~~~~~~~kl~D  170 (309)
T d1fvra_          94 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIAD  170 (309)
T ss_dssp             TTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECC
T ss_pred             CCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC---CccccccccceEEEcCCCceEEcc
Confidence            999999999653                5689999999999999999999998   999999999999999999999999


Q ss_pred             cCCCccccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCc-CCCcchhhhhhhhHHHHHHHhhc
Q 003836          646 FGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRR-NIDNEISKVDKAILTDWAYDRYQ  724 (792)
Q Consensus       646 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~-p~~~~~~~~~~~~~~~~~~~~~~  724 (792)
                      ||+++......  ......||..|+|||.+.+..++.++|||||||++|||++|.. ||.......              
T Consensus       171 fG~a~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~--------------  234 (309)
T d1fvra_         171 FGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--------------  234 (309)
T ss_dssp             TTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--------------
T ss_pred             ccccccccccc--cccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHH--------------
Confidence            99998654322  2233468999999999999999999999999999999999875 454332111              


Q ss_pred             ccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          725 ERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       725 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                         +...+....+...+...++++.+|+.+||+.||++||||+||++.|+++++
T Consensus       235 ---~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~  285 (309)
T d1fvra_         235 ---LYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE  285 (309)
T ss_dssp             ---HHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ---HHHHHHhcCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence               001111122233344456789999999999999999999999999988764

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6e-46  Score=392.66  Aligned_cols=257  Identities=25%  Similarity=0.369  Sum_probs=196.8

Q ss_pred             hhhhhhcCccccceEEEeeecC----CCceEEEEEEccccc-ccchHHHHHHHHHhccc-CCCCcccccceeccC-CceE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNM----GSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEG-QNRL  575 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~----~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~-~~~~  575 (792)
                      +.+.++||+|+||.||+|....    .+++.||||+++... ....+.+.+|...+.++ +|+||+.+++++.+. ...+
T Consensus        15 y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~~   94 (299)
T d1ywna1          15 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLM   94 (299)
T ss_dssp             EEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCE
T ss_pred             EEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCeEE
Confidence            4456889999999999997642    235689999997543 33456788888888877 799999999998654 5689


Q ss_pred             EEEEeccCCCccccccCC----------------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCC
Q 003836          576 LVYEFMSNGTVASFLFGD----------------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY  639 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~  639 (792)
                      +||||+++|+|.++++..                ..+++..+..++.||++||+|||++   +|+||||||+||||++++
T Consensus        95 iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~ivHrDlKp~NILl~~~~  171 (299)
T d1ywna1          95 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKN  171 (299)
T ss_dssp             EEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGG
T ss_pred             EEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC---CCcCCcCCccceeECCCC
Confidence            999999999999998643                2478999999999999999999998   999999999999999999


Q ss_pred             CeEEeecCCCccccCCCCC-ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCc-CCCcchhhhhhhhHHH
Q 003836          640 NARISDFGLAKLLTLDQSH-TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRR-NIDNEISKVDKAILTD  717 (792)
Q Consensus       640 ~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~-p~~~~~~~~~~~~~~~  717 (792)
                      .+||+|||+|+........ ......||+.|+|||.+.+..++.++|||||||++|||+||.. ||........      
T Consensus       172 ~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~------  245 (299)
T d1ywna1         172 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE------  245 (299)
T ss_dssp             CEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH------
T ss_pred             cEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHH------
Confidence            9999999999876544333 3344679999999999999999999999999999999999765 5644322111      


Q ss_pred             HHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          718 WAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                                +...+........+...++++.+++.+||+.||++|||++||+++|+++++
T Consensus       246 ----------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq  296 (299)
T d1ywna1         246 ----------FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  296 (299)
T ss_dssp             ----------HHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ----------HHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence                      011111122222333455678999999999999999999999999998754

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-45  Score=391.64  Aligned_cols=253  Identities=25%  Similarity=0.357  Sum_probs=201.2

Q ss_pred             hhhhhhcCccccceEEEeeecCCC---ceEEEEEEcccc-cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGS---SNHVAVKKLNSV-FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~---~~~vavK~~~~~-~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~  578 (792)
                      +.+.++||+|+||+||+|......   ...||+|+++.. .....++|.+|++++++++|||||+++|+|.++ ..++++
T Consensus        11 y~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~v~   89 (317)
T d1xkka_          11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLIT   89 (317)
T ss_dssp             EEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEEE
T ss_pred             CEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeEEE
Confidence            345578999999999999764322   236899998653 344567899999999999999999999999865 567889


Q ss_pred             EeccCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC
Q 003836          579 EFMSNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       579 E~~~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      ||+.+|+|.+++... ..+++..+++++.||++||+|||++   +|+||||||+||||+.++.+||+|||+++.......
T Consensus        90 e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~---~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~  166 (317)
T d1xkka_          90 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK  166 (317)
T ss_dssp             ECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC
T ss_pred             EeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHc---CcccCcchhhcceeCCCCCeEeeccccceecccccc
Confidence            999999999888654 5789999999999999999999998   999999999999999999999999999998765443


Q ss_pred             Cc-cccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhch
Q 003836          658 HT-NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILTDWAYDRYQERTLEALVEND  735 (792)
Q Consensus       658 ~~-~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  735 (792)
                      .. .....||+.|+|||.+.+..++.++|||||||++|||+| |+.||.......                 +...+...
T Consensus       167 ~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~-----------------~~~~i~~~  229 (317)
T d1xkka_         167 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-----------------ISSILEKG  229 (317)
T ss_dssp             --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGG-----------------HHHHHHHT
T ss_pred             cccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHH-----------------HHHHHHcC
Confidence            32 233568999999999999999999999999999999999 677776442211                 11112222


Q ss_pred             hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          736 LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       736 ~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                      .....+...+.++.+++.+||+.||++|||++||++.|+.+
T Consensus       230 ~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~  270 (317)
T d1xkka_         230 ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM  270 (317)
T ss_dssp             CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CCCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHH
Confidence            22233444567889999999999999999999999988664

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=7.9e-45  Score=385.39  Aligned_cols=244  Identities=23%  Similarity=0.300  Sum_probs=205.1

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccc---cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV---FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +.+.++||+|+||+||+|... .+++.||||++++.   .....+.+.+|+.++++++|||||++++++.+.+..++|||
T Consensus         6 y~i~~~lG~G~fg~Vy~a~~~-~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE   84 (316)
T d1fota_           6 FQILRTLGTGSFGRVHLIRSR-HNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMD   84 (316)
T ss_dssp             EEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred             eEEEEEEecCcCcEEEEEEEC-CCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEee
Confidence            345678999999999999753 55789999998743   23345789999999999999999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      |+++|+|..++.....+++.....++.||+.||+|||++   +|+||||||+||||+.++.+||+|||+|+.....    
T Consensus        85 ~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~----  157 (316)
T d1fota_          85 YIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV----  157 (316)
T ss_dssp             CCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSC----
T ss_pred             ecCCccccccccccccccccHHHHHHHHHHHhhhhhccC---cEEccccCchheeEcCCCCEEEecCccceEeccc----
Confidence            999999999998888899999999999999999999999   9999999999999999999999999999876432    


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      .....||+.|+|||++.+..++.++|||||||++|||++|+.||........   .             ..+....  ..
T Consensus       158 ~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~---~-------------~~i~~~~--~~  219 (316)
T d1fota_         158 TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT---Y-------------EKILNAE--LR  219 (316)
T ss_dssp             BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH---H-------------HHHHHCC--CC
T ss_pred             cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHH---H-------------HHHHcCC--CC
Confidence            2346799999999999999999999999999999999999999976432211   0             1111111  11


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCC-----CHHhHHHH
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRP-----TMRKVTQM  772 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RP-----s~~evl~~  772 (792)
                      .+...++++.+++.+||+.||.+||     |++|+++.
T Consensus       220 ~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~H  257 (316)
T d1fota_         220 FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH  257 (316)
T ss_dssp             CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             CCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcC
Confidence            2233456788999999999999996     89999864

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-45  Score=389.13  Aligned_cols=257  Identities=26%  Similarity=0.408  Sum_probs=210.7

Q ss_pred             hhhhhhcCccccceEEEeeec----CCCceEEEEEEcccccc-cchHHHHHHHHHhccc-CCCCcccccceeccCCceEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVN----MGSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNRLL  576 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~----~~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~~l  576 (792)
                      ..+.++||+|+||.||+|++.    ...++.||||+++.... ....+|.+|+.+++++ +|||||+++++|.+.+..++
T Consensus        25 ~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~~l  104 (311)
T d1t46a_          25 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLV  104 (311)
T ss_dssp             EEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             eEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEEEE
Confidence            446688999999999999763    34567999999976433 3455799999999999 69999999999999999999


Q ss_pred             EEEeccCCCccccccCCC------------------CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC
Q 003836          577 VYEFMSNGTVASFLFGDS------------------KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH  638 (792)
Q Consensus       577 V~E~~~~gsL~~~l~~~~------------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~  638 (792)
                      ||||+++|+|.++++...                  .+++..+.+++.||++||+|||++   +|+||||||+|||++.+
T Consensus       105 vmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~---~ivHrDLKp~NIl~~~~  181 (311)
T d1t46a_         105 ITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHG  181 (311)
T ss_dssp             EEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEETT
T ss_pred             EEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---Ceeeccccccccccccc
Confidence            999999999999986432                  578999999999999999999999   99999999999999999


Q ss_pred             CCeEEeecCCCccccCCCC-CccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHH
Q 003836          639 YNARISDFGLAKLLTLDQS-HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTD  717 (792)
Q Consensus       639 ~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~  717 (792)
                      +.+||+|||+++....... .......||+.|+|||.+.+..++.++|||||||++|||+|++.|+........      
T Consensus       182 ~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~------  255 (311)
T d1t46a_         182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS------  255 (311)
T ss_dssp             TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH------
T ss_pred             CcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHH------
Confidence            9999999999997754433 233446789999999999999999999999999999999996655543222111      


Q ss_pred             HHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          718 WAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                               .+..++........+...+.++.+|+.+||+.||++||||+||+++|++.+
T Consensus       256 ---------~~~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i  306 (311)
T d1t46a_         256 ---------KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI  306 (311)
T ss_dssp             ---------HHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ---------HHHHHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhh
Confidence                     112222333333334445678999999999999999999999999998753

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-44  Score=382.51  Aligned_cols=256  Identities=27%  Similarity=0.347  Sum_probs=204.6

Q ss_pred             hhhhhhcCccccceEEEeeecCC------CceEEEEEEcccccc-cchHHHHHHHHHhccc-CCCCcccccceeccCCce
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMG------SSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQT-HHKNLVRLLGYCDEGQNR  574 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~------~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~~~~~  574 (792)
                      +.+.++||+|+||.||+|.....      ....||||+++.... ....++.+|...+.++ +|||||+++++|.+++..
T Consensus        15 ~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~~~   94 (299)
T d1fgka_          15 LVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL   94 (299)
T ss_dssp             EEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             eEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCCeE
Confidence            34567899999999999976422      234799999976543 3457888999999888 899999999999999999


Q ss_pred             EEEEEeccCCCccccccCC----------------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC
Q 003836          575 LLVYEFMSNGTVASFLFGD----------------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH  638 (792)
Q Consensus       575 ~lV~E~~~~gsL~~~l~~~----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~  638 (792)
                      ++||||+++|+|.+++...                ..+++.++++++.||+.||+|||+.   +|+||||||+|||++.+
T Consensus        95 ~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~---~ivHrDiKp~NiLl~~~  171 (299)
T d1fgka_          95 YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTED  171 (299)
T ss_dssp             EEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTT
T ss_pred             EEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC---CEEeeeecccceeecCC
Confidence            9999999999999999644                3479999999999999999999999   99999999999999999


Q ss_pred             CCeEEeecCCCccccCCCCCc-cccccccCCcccccccccCCCCcccceehHHHHHHHHHh-cCcCCCcchhhhhhhhHH
Q 003836          639 YNARISDFGLAKLLTLDQSHT-NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIIC-LRRNIDNEISKVDKAILT  716 (792)
Q Consensus       639 ~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~t-g~~p~~~~~~~~~~~~~~  716 (792)
                      +.+||+|||+++......... .....+++.|+|||.+.+..++.|+|||||||++|||++ |+.||.......      
T Consensus       172 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~------  245 (299)
T d1fgka_         172 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------  245 (299)
T ss_dssp             CCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH------
T ss_pred             CCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHH------
Confidence            999999999999776544332 344678999999999999999999999999999999998 577775433211      


Q ss_pred             HHHHHhhcccchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          717 DWAYDRYQERTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                                 +...+........+...+.++.+|+.+||+.||++|||+.||+++|++++.
T Consensus       246 -----------~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a  296 (299)
T d1fgka_         246 -----------LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA  296 (299)
T ss_dssp             -----------HHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -----------HHHHHHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence                       111122222233334456788999999999999999999999999998753

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-44  Score=381.52  Aligned_cols=255  Identities=25%  Similarity=0.402  Sum_probs=206.6

Q ss_pred             hhhhhcCccccceEEEeeecC----CCceEEEEEEcccccc-cchHHHHHHHHHhcccCCCCcccccceeccCCceEEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNM----GSSNHVAVKKLNSVFQ-DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~----~~~~~vavK~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~  578 (792)
                      .+.+.||+|+||+||+|.+..    ..++.||||+++.... .....|.+|++++++++|||||+++++|...+..++||
T Consensus        23 ~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~  102 (308)
T d1p4oa_          23 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM  102 (308)
T ss_dssp             EEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             EEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCceeEEE
Confidence            355789999999999997642    2346899999975433 33456899999999999999999999999999999999


Q ss_pred             EeccCCCccccccCC----------CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCC
Q 003836          579 EFMSNGTVASFLFGD----------SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGL  648 (792)
Q Consensus       579 E~~~~gsL~~~l~~~----------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~  648 (792)
                      ||+++|+|.+++...          ..+++..+.+++.||++||.|||++   +|+||||||+|||+++++++||+|||+
T Consensus       103 e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~---~ivHrDlk~~NiLld~~~~~Kl~DFGl  179 (308)
T d1p4oa_         103 ELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM  179 (308)
T ss_dssp             ECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEECCTTC
T ss_pred             eecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeeceEcCCceeecCCceEEEeeccc
Confidence            999999999998642          2468889999999999999999998   999999999999999999999999999


Q ss_pred             CccccCCCCC-ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcC-cCCCcchhhhhhhhHHHHHHHhhccc
Q 003836          649 AKLLTLDQSH-TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLR-RNIDNEISKVDKAILTDWAYDRYQER  726 (792)
Q Consensus       649 a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~  726 (792)
                      ++........ ......||+.|+|||.+.+..++.++||||||+++|||+||+ .|+........               
T Consensus       180 a~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~---------------  244 (308)
T d1p4oa_         180 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV---------------  244 (308)
T ss_dssp             CCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHH---------------
T ss_pred             ceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHH---------------
Confidence            9876543332 233346899999999999999999999999999999999996 55543321100               


Q ss_pred             chhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCcC
Q 003836          727 TLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVVE  778 (792)
Q Consensus       727 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~~  778 (792)
                       +..+.+ ......+...+..+.+++.+||+.+|++||||+||+++|++.++
T Consensus       245 -~~~i~~-~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~  294 (308)
T d1p4oa_         245 -LRFVME-GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  294 (308)
T ss_dssp             -HHHHHT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             -HHHHHh-CCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence             011111 11122233455689999999999999999999999999998755

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-44  Score=381.70  Aligned_cols=267  Identities=22%  Similarity=0.274  Sum_probs=196.7

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCC----ceEEEEEe
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQ----NRLLVYEF  580 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~----~~~lV~E~  580 (792)
                      +.++||+|+||+||+|+++   ++.||||+++.. ......++.|+..+.+++|||||+++++|.+.+    ..++||||
T Consensus         7 l~~~iG~G~fg~Vy~~~~~---g~~vAvK~~~~~-~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey   82 (303)
T d1vjya_           7 LQESIGKGRFGEVWRGKWR---GEEVAVKIFSSR-EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY   82 (303)
T ss_dssp             EEEEEECCSSSEEEEEEET---TEEEEEEEECGG-GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred             EEEEEeeCCCeEEEEEEEC---CEEEEEEEECcc-chhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEec
Confidence            3468999999999999863   578999998643 222233455666777899999999999997543    57899999


Q ss_pred             ccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhcc-----CCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCC
Q 003836          581 MSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEEC-----CTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD  655 (792)
Q Consensus       581 ~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~  655 (792)
                      +++|+|.++|++. .+++..+.+++.|+|.||+|||+..     ..+|+||||||+||||++++.+||+|||+++.....
T Consensus        83 ~~~g~L~~~l~~~-~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~  161 (303)
T d1vjya_          83 HEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA  161 (303)
T ss_dssp             CTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETT
T ss_pred             ccCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccccCC
Confidence            9999999999764 6899999999999999999999732     248999999999999999999999999999987544


Q ss_pred             CCC---ccccccccCCcccccccccC------CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhccc
Q 003836          656 QSH---TNTAIRGTKGYVAPEWFRNM------PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQER  726 (792)
Q Consensus       656 ~~~---~~~~~~gt~~y~aPE~~~~~------~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~  726 (792)
                      ...   ......||+.|+|||++.+.      .++.|+|||||||+||||+||..|+.............. ......+.
T Consensus       162 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~-~~~~~~~~  240 (303)
T d1vjya_         162 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV-PSDPSVEE  240 (303)
T ss_dssp             TTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTS-CSSCCHHH
T ss_pred             CcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcc-cccchHHH
Confidence            332   22346799999999998654      367899999999999999999988744321110000000 00000000


Q ss_pred             chhHhhhchhccc-----CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          727 TLEALVENDLEAM-----NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       727 ~~~~~~~~~~~~~-----~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      ....+.++..++.     .+.+....+.+++.+||+.||++|||+.||+++|+.+.
T Consensus       241 ~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~  296 (303)
T d1vjya_         241 MRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS  296 (303)
T ss_dssp             HHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence            0111111111111     12346677999999999999999999999999998764

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-44  Score=376.68  Aligned_cols=260  Identities=23%  Similarity=0.243  Sum_probs=197.7

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEccccccc-----chHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD-----SEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~-----~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      ++||+|+||+||+|... .+++.||||+++.....     ..+.+.+|+.++++++|||||++++++.+.++.+|||||+
T Consensus         4 ~~lG~G~fg~Vy~~~~~-~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~   82 (299)
T d1ua2a_           4 DFLGEGQFATVYKARDK-NTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM   82 (299)
T ss_dssp             EEEEEETTEEEEEEECS-SCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred             eEeccCcCeEEEEEEEC-CCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhh
Confidence            57999999999999754 56789999998653322     2356899999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      +++++..++.....+++..+..++.||+.||+|||++   +|+||||||+|||+++++.+||+|||+++....... ...
T Consensus        83 ~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~-~~~  158 (299)
T d1ua2a_          83 ETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR-AYT  158 (299)
T ss_dssp             SEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC-CCC
T ss_pred             cchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcc---ceecccCCcceEEecCCCccccccCccccccCCCcc-ccc
Confidence            9998888887778899999999999999999999998   999999999999999999999999999987654332 223


Q ss_pred             cccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHh------hhc
Q 003836          662 AIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEAL------VEN  734 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~  734 (792)
                      ...||+.|+|||.+.. ..++.++|||||||++|||++|+.||...........+..... ..........      ...
T Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~-~~~~~~~~~~~~~~~~~~~  237 (299)
T d1ua2a_         159 HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLG-TPTEEQWPDMCSLPDYVTF  237 (299)
T ss_dssp             CSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHC-CCCTTTSSSTTSSTTCCCC
T ss_pred             ceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcC-CCChhhccchhccchhhhh
Confidence            4568999999999865 4679999999999999999999999976543221111100000 0000000000      000


Q ss_pred             hhcccCC-----HHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          735 DLEAMNN-----VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       735 ~~~~~~~-----~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ......+     ...++++.+|+.+||+.||++|||++|++++
T Consensus       238 ~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H  280 (299)
T d1ua2a_         238 KSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  280 (299)
T ss_dssp             CCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             ccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC
Confidence            0000001     1234678999999999999999999999974

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.6e-44  Score=384.04  Aligned_cols=243  Identities=23%  Similarity=0.212  Sum_probs=204.0

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccc---cccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV---FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~---~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E  579 (792)
                      +.+.++||+|+||.||+|... .+++.||||++.+.   .....+.+.+|++++++++|||||++++++.+....++|||
T Consensus        43 y~i~~~lG~G~fg~Vy~a~~~-~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~e  121 (350)
T d1rdqe_          43 FDRIKTLGTGSFGRVMLVKHK-ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME  121 (350)
T ss_dssp             EEEEEEEEECSSCEEEEEEET-TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             eEEEEEeecCcCcEEEEEEEC-CCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccccc
Confidence            344578999999999999754 55789999998643   23345678999999999999999999999999999999999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCc
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      |+.+|+|..++.....+++..+..++.||+.||.|||++   +|+||||||+||||+.++.+||+|||+|+.....    
T Consensus       122 ~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~---~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~----  194 (350)
T d1rdqe_         122 YVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----  194 (350)
T ss_dssp             CCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC----
T ss_pred             cccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCcCCHHHcccCCCCCEEeeeceeeeecccc----
Confidence            999999999998888899999999999999999999998   9999999999999999999999999999876432    


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhccc
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEAM  739 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  739 (792)
                      .....||+.|||||++.+..++.++|||||||++|||+||+.||........   +             ..+....  ..
T Consensus       195 ~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~---~-------------~~i~~~~--~~  256 (350)
T d1rdqe_         195 TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI---Y-------------EKIVSGK--VR  256 (350)
T ss_dssp             BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---H-------------HHHHHCC--CC
T ss_pred             cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHH---H-------------HHHhcCC--CC
Confidence            2345799999999999999999999999999999999999999975432110   0             0111111  11


Q ss_pred             CCHHHHHHHHHHHHHccccCCCCCC-----CHHhHHH
Q 003836          740 NNVTMLHRFVMVAFWCIQEDPSHRP-----TMRKVTQ  771 (792)
Q Consensus       740 ~~~~~~~~l~~l~~~Cl~~~p~~RP-----s~~evl~  771 (792)
                      .+...+.++.+++.+||+.||.+|+     |++|+++
T Consensus       257 ~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         257 FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             CCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence            2233456788999999999999994     8999986

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=3.2e-44  Score=374.86  Aligned_cols=256  Identities=22%  Similarity=0.318  Sum_probs=199.5

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccc---cchHHHHHHHHHhcccCCCCcccccceeccCC----ceE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ---DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQ----NRL  575 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~---~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~----~~~  575 (792)
                      +.+.+.||+|+||+||+|.. ..+++.||||+++....   ...+.+.+|++++++++||||+++++++...+    ..+
T Consensus         9 Y~i~~~lG~G~fg~Vy~a~~-~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~   87 (277)
T d1o6ya_           9 YELGEILGFGGMSEVHLARD-LRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY   87 (277)
T ss_dssp             EEEEEEEEECSSEEEEEEEE-TTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred             eEEeEEEeeCCCeEEEEEEE-CCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEE
Confidence            44567899999999999975 35678999999975432   23457999999999999999999999987544    378


Q ss_pred             EEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCC
Q 003836          576 LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD  655 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~  655 (792)
                      |||||+++++|.+++.....+++.++..|+.||+.||+|||+.   +|+||||||+|||++.++..+|+|||.++.....
T Consensus        88 lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~  164 (277)
T d1o6ya_          88 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADS  164 (277)
T ss_dssp             EEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTSCEEECCCTTCEECC--
T ss_pred             EEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCccccCcccccCccccceeehhhhhhhhccc
Confidence            9999999999999998888899999999999999999999998   9999999999999999999999999999865433


Q ss_pred             CC--CccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhh
Q 003836          656 QS--HTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVE  733 (792)
Q Consensus       656 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  733 (792)
                      ..  .......||+.|+|||++.+..++.++|||||||++|||+||+.||........       ..........     
T Consensus       165 ~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~-------~~~~~~~~~~-----  232 (277)
T d1o6ya_         165 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV-------AYQHVREDPI-----  232 (277)
T ss_dssp             --------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-------HHHHHHCCCC-----
T ss_pred             cccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHH-------HHHHHhcCCC-----
Confidence            22  233456799999999999999999999999999999999999999975432211       0111111100     


Q ss_pred             chhcccCCHHHHHHHHHHHHHccccCCCCCC-CHHhHHHHhccC
Q 003836          734 NDLEAMNNVTMLHRFVMVAFWCIQEDPSHRP-TMRKVTQMLEGV  776 (792)
Q Consensus       734 ~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RP-s~~evl~~L~~~  776 (792)
                        .........++++.+++.+||+.||++|| |++++++.|.++
T Consensus       233 --~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~  274 (277)
T d1o6ya_         233 --PPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV  274 (277)
T ss_dssp             --CGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             --CCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHH
Confidence              00111123456788999999999999999 899999888764

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-44  Score=381.76  Aligned_cols=246  Identities=23%  Similarity=0.313  Sum_probs=202.5

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHHHHHHhc-ccCCCCcccccceeccCCceEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKAEVNGIG-QTHHKNLVRLLGYCDEGQNRLLVY  578 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~Ei~~l~-~l~h~niv~l~g~~~~~~~~~lV~  578 (792)
                      +.+.++||+|+||+||+|+.. .+++.||||++++..   ....+.+..|..++. .++|||||++++++.+++..+|||
T Consensus         4 y~i~~~iG~G~fg~Vy~~~~~-~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivm   82 (320)
T d1xjda_           4 FILHKMLGKGSFGKVFLAEFK-KTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVM   82 (320)
T ss_dssp             EEEEEEEEECSSSEEEEEEET-TTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             eEEeeEEecCCCcEEEEEEEC-CCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEE
Confidence            345688999999999999754 567899999997532   334456777777665 689999999999999999999999


Q ss_pred             EeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCC
Q 003836          579 EFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       579 E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~  658 (792)
                      ||+++|+|.+++.....+++..+..++.||+.||+|||++   +|+||||||+|||+++++.+||+|||+++...... .
T Consensus        83 Ey~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~---~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~-~  158 (320)
T d1xjda_          83 EYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD-A  158 (320)
T ss_dssp             ECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT-C
T ss_pred             eecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCcccceeecCCCceeccccchhhhccccc-c
Confidence            9999999999998888899999999999999999999999   99999999999999999999999999998665332 2


Q ss_pred             ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc
Q 003836          659 TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA  738 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  738 (792)
                      ......||+.|+|||++.+..++.++|||||||++|||++|+.||........   .     ..        +...  ..
T Consensus       159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~---~-----~~--------i~~~--~~  220 (320)
T d1xjda_         159 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL---F-----HS--------IRMD--NP  220 (320)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH---H-----HH--------HHHC--CC
T ss_pred             cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHH---H-----HH--------HHcC--CC
Confidence            33446799999999999999999999999999999999999999976432211   0     00        0001  11


Q ss_pred             cCCHHHHHHHHHHHHHccccCCCCCCCHH-hHHH
Q 003836          739 MNNVTMLHRFVMVAFWCIQEDPSHRPTMR-KVTQ  771 (792)
Q Consensus       739 ~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~-evl~  771 (792)
                      ..+...+.++.+|+.+||+.||++||++. |+++
T Consensus       221 ~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         221 FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             CCCccCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence            12233456789999999999999999996 7764

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=7.9e-44  Score=370.36  Aligned_cols=246  Identities=22%  Similarity=0.287  Sum_probs=202.3

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccccc---------chHHHHHHHHHhcccC-CCCcccccceeccCCc
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD---------SEKEFKAEVNGIGQTH-HKNLVRLLGYCDEGQN  573 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~---------~~~~~~~Ei~~l~~l~-h~niv~l~g~~~~~~~  573 (792)
                      .+.+.||+|+||+||+|+. ..+++.+|||++.+....         ..+.+.+|+.++++++ ||||+++++++.+++.
T Consensus         6 ~~~~~iG~G~~g~V~~~~~-~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~   84 (277)
T d1phka_           6 EPKEILGRGVSSVVRRCIH-KPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTF   84 (277)
T ss_dssp             EEEEEEEECSSEEEEEEEE-TTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             EEceEEecCcCeEEEEEEE-CCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccCcc
Confidence            3457899999999999975 356789999998754221         2246889999999997 9999999999999999


Q ss_pred             eEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCcccc
Q 003836          574 RLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLT  653 (792)
Q Consensus       574 ~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~  653 (792)
                      .+|||||+++|+|.++|.....+++..+..++.||++||+|||++   +|+||||||+|||++.++.+||+|||+++...
T Consensus        85 ~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~  161 (277)
T d1phka_          85 FFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLD  161 (277)
T ss_dssp             EEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             eEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc---CCcccccccceEEEcCCCCeEEccchheeEcc
Confidence            999999999999999998888899999999999999999999998   99999999999999999999999999998765


Q ss_pred             CCCCCccccccccCCccccccccc------CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccc
Q 003836          654 LDQSHTNTAIRGTKGYVAPEWFRN------MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERT  727 (792)
Q Consensus       654 ~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  727 (792)
                      ...  ......||+.|+|||++.+      ..++.++||||+||++|||++|+.||..........              
T Consensus       162 ~~~--~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~--------------  225 (277)
T d1phka_         162 PGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLR--------------  225 (277)
T ss_dssp             TTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH--------------
T ss_pred             CCC--ceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHH--------------
Confidence            432  2344679999999999853      347889999999999999999999997653321110              


Q ss_pred             hhHhhhch--hcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          728 LEALVEND--LEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       728 ~~~~~~~~--~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                        .+....  .........++++.+++.+||+.||++|||++||++
T Consensus       226 --~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         226 --MIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             --HHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             --HHHhCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence              011111  011112235568899999999999999999999987

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1e-43  Score=384.11  Aligned_cols=246  Identities=22%  Similarity=0.252  Sum_probs=197.5

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc---ccchHHHHH---HHHHhcccCCCCcccccceeccCCceEEE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF---QDSEKEFKA---EVNGIGQTHHKNLVRLLGYCDEGQNRLLV  577 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~---~~~~~~~~~---Ei~~l~~l~h~niv~l~g~~~~~~~~~lV  577 (792)
                      .+.++||+|+||.||+|+. ..+++.||||++.+..   ......+.+   |+++++.++|||||++++++.+.+..++|
T Consensus         7 ~i~~~lG~G~fg~Vy~~~~-~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~iv   85 (364)
T d1omwa3           7 SVHRIIGRGGFGEVYGCRK-ADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFI   85 (364)
T ss_dssp             EEEEEEEECSSCEEEEEEE-TTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEE
T ss_pred             eeeeEEecCCCeEEEEEEE-CCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEEEE
Confidence            4567899999999999975 4567899999986421   222333444   46778888999999999999999999999


Q ss_pred             EEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC
Q 003836          578 YEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      |||+++|+|.++|.....+++..+..++.||+.||+|||++   +|+||||||+||||+.++.+||+|||+|+...... 
T Consensus        86 mE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~-  161 (364)
T d1omwa3          86 LDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-  161 (364)
T ss_dssp             ECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSSSCEEECCCTTCEECSSSC-
T ss_pred             EEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHC---CccceeeccceeEEcCCCcEEEeeeceeeecCCCc-
Confidence            99999999999998888899999999999999999999999   99999999999999999999999999998765432 


Q ss_pred             CccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          658 HTNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       658 ~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                        .....||+.|+|||++.. ..++.++|||||||++|||+||+.||............     .        ....  .
T Consensus       162 --~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~-----~--------~~~~--~  224 (364)
T d1omwa3         162 --PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID-----R--------MTLT--M  224 (364)
T ss_dssp             --CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHH-----H--------HSSS--C
T ss_pred             --ccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHH-----H--------hccc--C
Confidence              234569999999999875 56899999999999999999999999754322111000     0        0000  0


Q ss_pred             cccCCHHHHHHHHHHHHHccccCCCCCCC-----HHhHHH
Q 003836          737 EAMNNVTMLHRFVMVAFWCIQEDPSHRPT-----MRKVTQ  771 (792)
Q Consensus       737 ~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs-----~~evl~  771 (792)
                      ....+...++++.+|+.+||+.||++|||     ++|+++
T Consensus       225 ~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~  264 (364)
T d1omwa3         225 AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  264 (364)
T ss_dssp             CCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred             CCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence            11122234567899999999999999999     588875

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-43  Score=376.25  Aligned_cols=247  Identities=19%  Similarity=0.250  Sum_probs=202.3

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      |.+.++||+|+||+||+|.. ..+++.||||+++... .....+.+|+++|++++|||||++++++.+.+..+|||||++
T Consensus         7 Y~i~~~lG~G~fg~Vy~~~~-~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~   84 (321)
T d1tkia_           7 YMIAEDLGRGEFGIVHRCVE-TSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFIS   84 (321)
T ss_dssp             EEEEEEEEECSSEEEEEEEE-TTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred             eEEEEEEecCCCeEEEEEEE-CCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecCC
Confidence            44567899999999999964 4567899999997643 345678899999999999999999999999999999999999


Q ss_pred             CCCccccccCCC-CCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCC--CCeEEeecCCCccccCCCCCc
Q 003836          583 NGTVASFLFGDS-KPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDH--YNARISDFGLAKLLTLDQSHT  659 (792)
Q Consensus       583 ~gsL~~~l~~~~-~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~--~~~kl~Dfg~a~~~~~~~~~~  659 (792)
                      +|+|.+++.... .+++.++..|+.||+.||+|||++   +|+||||||+|||++.+  ..+||+|||+++.....  ..
T Consensus        85 gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~---~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~--~~  159 (321)
T d1tkia_          85 GLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG--DN  159 (321)
T ss_dssp             CCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT--CE
T ss_pred             CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHc---CCCcccccccceeecCCCceEEEEcccchhhccccC--Cc
Confidence            999999998764 789999999999999999999998   99999999999999854  58999999999876432  22


Q ss_pred             cccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchhcc-
Q 003836          660 NTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDLEA-  738 (792)
Q Consensus       660 ~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  738 (792)
                      .....+|+.|+|||.+.+..++.++|||||||++|||++|+.||........   +             ..+....... 
T Consensus       160 ~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~---~-------------~~i~~~~~~~~  223 (321)
T d1tkia_         160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQI---I-------------ENIMNAEYTFD  223 (321)
T ss_dssp             EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH---H-------------HHHHHTCCCCC
T ss_pred             ccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHH---H-------------HHHHhCCCCCC
Confidence            3445689999999999999999999999999999999999999976533211   0             0011110000 


Q ss_pred             -cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          739 -MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       739 -~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                       ......+.++.+|+.+||+.||++|||++|+++.
T Consensus       224 ~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~h  258 (321)
T d1tkia_         224 EEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH  258 (321)
T ss_dssp             HHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             hhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence             0001234678899999999999999999999973

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-43  Score=375.90  Aligned_cols=243  Identities=22%  Similarity=0.275  Sum_probs=193.9

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhccc-CCCCcccccceecc----CCceEEEEEec
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQT-HHKNLVRLLGYCDE----GQNRLLVYEFM  581 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~g~~~~----~~~~~lV~E~~  581 (792)
                      +.||+|+||+||+|... .+++.||||++++     ...+.+|++++.++ +|||||++++++.+    ....++|||||
T Consensus        18 ~~lG~G~fg~Vy~a~~~-~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~   91 (335)
T d2ozaa1          18 QVLGLGINGKVLQIFNK-RTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL   91 (335)
T ss_dssp             EEEEECSSCEEEEEEET-TTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred             EEeeeccCeEEEEEEEC-CCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEECC
Confidence            46999999999999753 4678999999864     35678899987665 89999999999864    46789999999


Q ss_pred             cCCCccccccCC--CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC---CCCeEEeecCCCccccCCC
Q 003836          582 SNGTVASFLFGD--SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD---HYNARISDFGLAKLLTLDQ  656 (792)
Q Consensus       582 ~~gsL~~~l~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~---~~~~kl~Dfg~a~~~~~~~  656 (792)
                      ++|+|.++|...  ..+++.++..|+.||+.||+|||+.   +|+||||||+|||+++   ++.+||+|||+++......
T Consensus        92 ~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~---~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~  168 (335)
T d2ozaa1          92 DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN  168 (335)
T ss_dssp             CSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCC
T ss_pred             CCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHc---CCccccccccccccccccccccccccccceeeeccCCC
Confidence            999999999764  4689999999999999999999998   9999999999999985   5679999999998765433


Q ss_pred             CCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhhchh
Q 003836          657 SHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVENDL  736 (792)
Q Consensus       657 ~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  736 (792)
                        ......||+.|+|||++.+..++.++|||||||++|||+||+.||...........+    ..        .+.....
T Consensus       169 --~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~----~~--------~i~~~~~  234 (335)
T d2ozaa1         169 --SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM----KT--------RIRMGQY  234 (335)
T ss_dssp             --CCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------------------CCCSCSS
T ss_pred             --ccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHH----HH--------HHhcCCC
Confidence              234457999999999999999999999999999999999999999654321110000    00        0000111


Q ss_pred             ccc--CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          737 EAM--NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       737 ~~~--~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ...  .....++++.+|+.+||+.||++|||++|+++.
T Consensus       235 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  272 (335)
T d2ozaa1         235 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  272 (335)
T ss_dssp             SCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             CCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            111  112346788999999999999999999999884

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.6e-43  Score=367.86  Aligned_cols=262  Identities=21%  Similarity=0.263  Sum_probs=195.9

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEecc
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFMS  582 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~~  582 (792)
                      ..++||+|+||+||+|+.. .+++.||||+++...  ....+++.+|++++++++|||||++++++.++.+.++||||+.
T Consensus         6 ~~~~lG~G~fg~Vy~~~~~-~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e~~~   84 (298)
T d1gz8a_           6 KVEKIGEGTYGVVYKARNK-LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH   84 (298)
T ss_dssp             EEEEEEECSSSEEEEEEET-TTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             eccEEecCcCeEEEEEEEC-CCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEeecC
Confidence            3478999999999999754 456789999996532  2345789999999999999999999999999999999999998


Q ss_pred             CCCccccccC-CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          583 NGTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       583 ~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      ++.+...... ...+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++...... ....
T Consensus        85 ~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~---~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~-~~~~  160 (298)
T d1gz8a_          85 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYT  160 (298)
T ss_dssp             EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCS-BCTT
T ss_pred             CchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcC---CEEccccCchheeecccCcceeccCCcceeccCCc-ccce
Confidence            7555444333 35789999999999999999999998   99999999999999999999999999998764332 2233


Q ss_pred             cccccCCcccccccccCC-CCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhh-chhccc
Q 003836          662 AIRGTKGYVAPEWFRNMP-ITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVE-NDLEAM  739 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~-~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  739 (792)
                      ...||+.|+|||.+.... ++.++|||||||++|||++|+.||............... .....+........ ......
T Consensus       161 ~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~  239 (298)
T d1gz8a_         161 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT-LGTPDEVVWPGVTSMPDYKPS  239 (298)
T ss_dssp             CCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH-HCCCCTTTSTTGGGSTTCCTT
T ss_pred             eecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHh-cCCCchhhccccccccccccc
Confidence            456999999999877655 578999999999999999999999754322111000000 00000000000000 000000


Q ss_pred             -----------CCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          740 -----------NNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       740 -----------~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                                 .....++++.+|+.+||+.||++|||++|+++.
T Consensus       240 ~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H  283 (298)
T d1gz8a_         240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH  283 (298)
T ss_dssp             SCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             cccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence                       011234678899999999999999999999985

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-43  Score=369.22  Aligned_cols=238  Identities=23%  Similarity=0.381  Sum_probs=195.0

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccccc------chHHHHHHHHHhcccC--CCCcccccceeccCCce
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQD------SEKEFKAEVNGIGQTH--HKNLVRLLGYCDEGQNR  574 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~------~~~~~~~Ei~~l~~l~--h~niv~l~g~~~~~~~~  574 (792)
                      +.+.+.||+|+||+||+|... .+++.||||++.+....      ...++.+|+.++++++  |||||++++++.+.+..
T Consensus         6 Y~i~~~lG~G~fg~Vy~a~~~-~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~   84 (273)
T d1xwsa_           6 YQVGPLLGSGGFGSVYSGIRV-SDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSF   84 (273)
T ss_dssp             EEEEEEEEEETTEEEEEEEET-TTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEE
T ss_pred             EEEeEEEeeCCCeEEEEEEEC-CCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCeE
Confidence            445678999999999999753 55789999998653211      1244778999999986  89999999999999999


Q ss_pred             EEEEEeccC-CCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC-CCCeEEeecCCCccc
Q 003836          575 LLVYEFMSN-GTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD-HYNARISDFGLAKLL  652 (792)
Q Consensus       575 ~lV~E~~~~-gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~-~~~~kl~Dfg~a~~~  652 (792)
                      ++||||+.+ +++.+++.....+++..+..++.||+.||+|||++   +|+||||||+|||++. ++.+||+|||+++..
T Consensus        85 ~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~  161 (273)
T d1xwsa_          85 VLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSGALL  161 (273)
T ss_dssp             EEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             EEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCccccCcccceEEecCCCeEEECccccceec
Confidence            999999976 67788887778899999999999999999999998   9999999999999985 478999999999865


Q ss_pred             cCCCCCccccccccCCcccccccccCCC-CcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHh
Q 003836          653 TLDQSHTNTAIRGTKGYVAPEWFRNMPI-TVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEAL  731 (792)
Q Consensus       653 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  731 (792)
                      ...   ......||+.|+|||++.+.++ +.++|||||||++|||++|+.||.......                     
T Consensus       162 ~~~---~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~i~---------------------  217 (273)
T d1xwsa_         162 KDT---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII---------------------  217 (273)
T ss_dssp             CSS---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHH---------------------
T ss_pred             ccc---cccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchHHh---------------------
Confidence            432   2345679999999999987765 577999999999999999999997532110                     


Q ss_pred             hhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          732 VENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       732 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                       ...  ...+...+.++.+++.+||+.||++|||++|+++
T Consensus       218 -~~~--~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         218 -RGQ--VFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             -HCC--CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             -hcc--cCCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence             000  0111223467889999999999999999999987

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-42  Score=368.64  Aligned_cols=264  Identities=20%  Similarity=0.274  Sum_probs=195.6

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhccc---CCCCcccccceec-----cCC
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQT---HHKNLVRLLGYCD-----EGQ  572 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l---~h~niv~l~g~~~-----~~~  572 (792)
                      +.+.++||+|+||+||+|.....+++.||||+++...  ......+.+|+.+++.+   +||||++++++|.     ...
T Consensus         9 Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~   88 (305)
T d1blxa_           9 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET   88 (305)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEE
T ss_pred             EEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccccCc
Confidence            3455789999999999997654556789999986532  22234567788877766   7999999999984     335


Q ss_pred             ceEEEEEeccCCCccccccC-CCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCcc
Q 003836          573 NRLLVYEFMSNGTVASFLFG-DSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKL  651 (792)
Q Consensus       573 ~~~lV~E~~~~gsL~~~l~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~  651 (792)
                      ..+++|||++++++...... ...+++..+..++.||+.||+|||++   +|+||||||+|||+++++.+||+|||+++.
T Consensus        89 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~---~ivHrDiKp~NILi~~~~~~kl~dfg~~~~  165 (305)
T d1blxa_          89 KLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARI  165 (305)
T ss_dssp             EEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCCSCCC
T ss_pred             eEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecCCCccEEEEcCCCCeeecchhhhhh
Confidence            68899999999877655443 45688999999999999999999998   999999999999999999999999999986


Q ss_pred             ccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHH----hhccc-
Q 003836          652 LTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYD----RYQER-  726 (792)
Q Consensus       652 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~----~~~~~-  726 (792)
                      ....  .......||+.|+|||++.+..++.++||||+||++|||++|+.||...........+......    .+... 
T Consensus       166 ~~~~--~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  243 (305)
T d1blxa_         166 YSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV  243 (305)
T ss_dssp             CCGG--GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTC
T ss_pred             hccc--ccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccc
Confidence            5432  2334567999999999999999999999999999999999999999765432111111000000    00000 


Q ss_pred             ch-hHhhhc---hhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          727 TL-EALVEN---DLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       727 ~~-~~~~~~---~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      .. ......   ..........++.+.+|+.+||+.||++|||++|+++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~  292 (305)
T d1blxa_         244 ALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  292 (305)
T ss_dssp             SSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             cchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            00 000000   0000111233567889999999999999999999987

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.9e-42  Score=361.98  Aligned_cols=259  Identities=19%  Similarity=0.232  Sum_probs=198.9

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      ...++||+|+||+||+|...  +++.||||++....  ....+.+.+|+.++++++|||||++++++.+.++.++++||+
T Consensus         5 ~~~~~iG~G~fg~Vy~~~~~--~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~~   82 (286)
T d1ob3a_           5 HGLEKIGEGTYGVVYKAQNN--YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHL   82 (286)
T ss_dssp             EEEEEEEEETTEEEEEEEET--TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECC
T ss_pred             eeccEEecCCCcEEEEEEeC--CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEee
Confidence            34578999999999999764  45789999986542  334678999999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      .++.+..+......+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||.+........ ...
T Consensus        83 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~-~~~  158 (286)
T d1ob3a_          83 DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR-KYT  158 (286)
T ss_dssp             SEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-------
T ss_pred             hhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccC---cEEecCCCCceeeEcCCCCEEecccccceecccCcc-ccc
Confidence            9988888887788899999999999999999999998   999999999999999999999999999987653322 223


Q ss_pred             cccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhc--ccc---hhHhhh--
Q 003836          662 AIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQ--ERT---LEALVE--  733 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~--  733 (792)
                      ...+++.|+|||.+.+ ..++.++|||||||++|||++|+.||.........   .........  ...   ......  
T Consensus       159 ~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~  235 (286)
T d1ob3a_         159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQL---MRIFRILGTPNSKNWPNVTELPKYD  235 (286)
T ss_dssp             ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH---HHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred             eecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHH---HHHHHhhCCCChhhccchhhhhhcc
Confidence            3458999999999875 45799999999999999999999999754322111   010000000  000   000000  


Q ss_pred             -------chhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          734 -------NDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       734 -------~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                             ...........++.+.+++.+||+.||++|||++|+++
T Consensus       236 ~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             TTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                   00001111223567889999999999999999999986

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-40  Score=354.84  Aligned_cols=265  Identities=19%  Similarity=0.241  Sum_probs=196.7

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccc--cccchHHHHHHHHHhcccCCCCcccccceecc--------CC
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV--FQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDE--------GQ  572 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~--------~~  572 (792)
                      +.+.++||+|+||+||+|... .+++.||||++...  .....+.+.+|+++|++++|+||+++++++..        ..
T Consensus        12 Y~i~~~LG~G~fg~Vy~a~~~-~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~~   90 (318)
T d3blha1          12 YEKLAKIGQGTFGEVFKARHR-KTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKG   90 (318)
T ss_dssp             EEEEEEEEECSSSEEEEEEET-TTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC----------
T ss_pred             EEEEEEEecCcCeEEEEEEEC-CCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccCc
Confidence            345578999999999999754 56789999998643  23345788999999999999999999998854        34


Q ss_pred             ceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccc
Q 003836          573 NRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLL  652 (792)
Q Consensus       573 ~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~  652 (792)
                      +.++||||++++.+..+......+++..+..++.||+.||.|||+.   +|+||||||+|||++.++.+||+|||+++..
T Consensus        91 ~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~---~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~  167 (318)
T d3blha1          91 SIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAF  167 (318)
T ss_dssp             CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred             eEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccC---CEEecCcCchheeecCCCcEEeeecceeeec
Confidence            6889999999988887777777889999999999999999999998   9999999999999999999999999999876


Q ss_pred             cCCCC---CccccccccCCcccccccccC-CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhccc--
Q 003836          653 TLDQS---HTNTAIRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQER--  726 (792)
Q Consensus       653 ~~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~--  726 (792)
                      .....   .......||+.|+|||.+.+. .++.++|||||||++|||++|+.||................ ......  
T Consensus       168 ~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~  246 (318)
T d3blha1         168 SLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLC-GSITPEVW  246 (318)
T ss_dssp             CC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH-CCCCTTTS
T ss_pred             ccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhc-CCCChhhc
Confidence            54322   122335699999999998764 68999999999999999999999997654322211111110 000000  


Q ss_pred             ------chhHhhhchhcccCC-------HHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          727 ------TLEALVENDLEAMNN-------VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       727 ------~~~~~~~~~~~~~~~-------~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                            ...............       ......+++|+.+||+.||++|||++|+++.
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H  305 (318)
T d3blha1         247 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  305 (318)
T ss_dssp             TTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             cccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcC
Confidence                  000000000000001       1123567889999999999999999999974

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-41  Score=359.23  Aligned_cols=253  Identities=22%  Similarity=0.238  Sum_probs=204.8

Q ss_pred             hhhhhhcCccccceEEEeeec--CCCceEEEEEEccccc----ccchHHHHHHHHHhcccCC-CCcccccceeccCCceE
Q 003836          503 RGFKEELGRGAFGTVYKGFVN--MGSSNHVAVKKLNSVF----QDSEKEFKAEVNGIGQTHH-KNLVRLLGYCDEGQNRL  575 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~--~~~~~~vavK~~~~~~----~~~~~~~~~Ei~~l~~l~h-~niv~l~g~~~~~~~~~  575 (792)
                      +.+.++||+|+||+||+|...  ..+++.||||++++..    ....+.+.+|++++++++| |||+++++++.+....+
T Consensus        26 y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~~  105 (322)
T d1vzoa_          26 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLH  105 (322)
T ss_dssp             EEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEE
T ss_pred             eEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCcee
Confidence            456689999999999999752  3457899999986532    2235678899999999966 89999999999999999


Q ss_pred             EEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCC
Q 003836          576 LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD  655 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~  655 (792)
                      +||||+.+|+|.+++.....+.+.....++.||+.||+|||+.   +|+||||||+|||++.++.+||+|||+++.+...
T Consensus       106 ~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~  182 (322)
T d1vzoa_         106 LILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVAD  182 (322)
T ss_dssp             EEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEECCGG
T ss_pred             eeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcC---CEEeccCCccceeecCCCCEEEeeccchhhhccc
Confidence            9999999999999998888888999999999999999999998   9999999999999999999999999999877655


Q ss_pred             CCCccccccccCCcccccccccC--CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHhhh
Q 003836          656 QSHTNTAIRGTKGYVAPEWFRNM--PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEALVE  733 (792)
Q Consensus       656 ~~~~~~~~~gt~~y~aPE~~~~~--~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  733 (792)
                      .........|++.|+|||.+.+.  .++.++|||||||+||||++|+.||...........+..   .         ...
T Consensus       183 ~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~---~---------~~~  250 (322)
T d1vzoa_         183 ETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISR---R---------ILK  250 (322)
T ss_dssp             GGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHH---H---------HHH
T ss_pred             ccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH---h---------ccc
Confidence            55555566799999999998754  478899999999999999999999976533211111100   0         000


Q ss_pred             chhcccCCHHHHHHHHHHHHHccccCCCCCCC-----HHhHHHH
Q 003836          734 NDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPT-----MRKVTQM  772 (792)
Q Consensus       734 ~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs-----~~evl~~  772 (792)
                        .....+...+.++.+++.+||+.||++|||     ++|+++.
T Consensus       251 --~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~H  292 (322)
T d1vzoa_         251 --SEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  292 (322)
T ss_dssp             --CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             --CCCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcC
Confidence              011223345678899999999999999994     7888863

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-40  Score=348.31  Aligned_cols=263  Identities=19%  Similarity=0.231  Sum_probs=203.2

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCCceEEEEEec
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      ...++||+|+||+||+|+.. .+++.||||+++...  ....+.+.+|+.++++++||||+++++++.+....++|+|++
T Consensus         5 ~~i~~LG~G~fg~V~~~~~~-~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~~~   83 (292)
T d1unla_           5 EKLEKIGEGTYGTVFKAKNR-ETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC   83 (292)
T ss_dssp             EEEEEEEECSSSEEEEEEET-TTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EeeeEEecCcCeEEEEEEEC-CCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEeeec
Confidence            34578999999999999754 567899999986433  334578999999999999999999999999999999999999


Q ss_pred             cCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCCCccc
Q 003836          582 SNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQSHTNT  661 (792)
Q Consensus       582 ~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~~~~~  661 (792)
                      .+++|..++.....+++..+..++.|++.||+|||++   +|+||||||+|||++.++.+||+|||.++....... ...
T Consensus        84 ~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~---~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~-~~~  159 (292)
T d1unla_          84 DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR-CYS  159 (292)
T ss_dssp             SEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCS-CCC
T ss_pred             cccccccccccccccchhHHHHHHHHHHHHHHHhhcC---CEeeecccCcccccccCCceeeeecchhhcccCCCc-cce
Confidence            9999999988888899999999999999999999998   999999999999999999999999999987654332 223


Q ss_pred             cccccCCcccccccccCC-CCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccc---hhHhhh----
Q 003836          662 AIRGTKGYVAPEWFRNMP-ITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERT---LEALVE----  733 (792)
Q Consensus       662 ~~~gt~~y~aPE~~~~~~-~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----  733 (792)
                      ...+++.|+|||.+.... ++.++|||||||++|||++|+.||.......+.............+..   .....+    
T Consensus       160 ~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (292)
T d1unla_         160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY  239 (292)
T ss_dssp             SCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCC
T ss_pred             eeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhccccccc
Confidence            345788899999987654 699999999999999999999997543322211110000000000000   000000    


Q ss_pred             -----chhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          734 -----NDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       734 -----~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                           ............+.+.+|+.+||+.||.+|||++|+++
T Consensus       240 ~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         240 PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             CCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             ccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                 00011112234567889999999999999999999987

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.7e-40  Score=349.11  Aligned_cols=257  Identities=19%  Similarity=0.247  Sum_probs=193.9

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccc-cceeccCCceEEEEEec
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRL-LGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l-~g~~~~~~~~~lV~E~~  581 (792)
                      +.+.+.||+|+||+||+|... .+++.||||++....  ..+++..|++++++++|+|++.. ..+..+.+..++||||+
T Consensus         9 Y~l~~~iG~G~fG~Vy~a~~~-~~~~~vAvK~~~~~~--~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~   85 (299)
T d1ckia_           9 YRLGRKIGSGSFGDIYLGTDI-AAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL   85 (299)
T ss_dssp             EEEEEEEEECSSSEEEEEEET-TTTEEEEEEEEESCT--TSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             EEEeEEEeeCCCcEEEEEEEC-CCCCEEEEEEEchhc--cCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEc
Confidence            456688999999999999753 457899999887533  33468899999999987775555 45557778889999999


Q ss_pred             cCCCccccc-cCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEc---CCCCeEEeecCCCccccCCCC
Q 003836          582 SNGTVASFL-FGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLD---DHYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       582 ~~gsL~~~l-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~---~~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      .+ +|...+ .....+++..+..++.|++.||+|||++   +|+||||||+|||++   .+..+||+|||+|+.......
T Consensus        86 ~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~  161 (299)
T d1ckia_          86 GP-SLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART  161 (299)
T ss_dssp             CC-BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTT
T ss_pred             CC-chhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHhhccccccCCCceeeeeccCcceecccccc
Confidence            65 555544 4456899999999999999999999999   999999999999986   456799999999998754332


Q ss_pred             C------ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchhHh
Q 003836          658 H------TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLEAL  731 (792)
Q Consensus       658 ~------~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  731 (792)
                      .      ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..................... ....  
T Consensus       162 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~-~~~~--  238 (299)
T d1ckia_         162 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS-TPIE--  238 (299)
T ss_dssp             CCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHH-SCHH--
T ss_pred             ccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCC-CChh--
Confidence            2      233467999999999999999999999999999999999999999764332211111110000000 0000  


Q ss_pred             hhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccC
Q 003836          732 VENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGV  776 (792)
Q Consensus       732 ~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~  776 (792)
                         ..    ....++++.+++..||+.+|++||+++++.+.|+.+
T Consensus       239 ---~~----~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~  276 (299)
T d1ckia_         239 ---VL----CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  276 (299)
T ss_dssp             ---HH----TTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHH
T ss_pred             ---Hh----ccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence               00    112346788999999999999999999998888764

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-40  Score=358.59  Aligned_cols=258  Identities=21%  Similarity=0.216  Sum_probs=190.6

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcccccceecc------CCceEEEE
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLVRLLGYCDE------GQNRLLVY  578 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~------~~~~~lV~  578 (792)
                      ..++||+|+||+||+|+.. .+++.||||++.....    .+.+|+++|++++|+||++++++|..      ..+.+|||
T Consensus        24 ~~k~LG~G~fg~Vy~a~~~-~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~   98 (350)
T d1q5ka_          24 DTKVIGNGSFGVVYQAKLC-DSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL   98 (350)
T ss_dssp             EEEEEEEETTEEEEEEEET-TTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEE
T ss_pred             eeeEEeeCcCeEEEEEEEC-CCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEE
Confidence            4568999999999999754 5678999999975432    23579999999999999999999843      33578999


Q ss_pred             EeccCCCccccc---cCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCC-CeEEeecCCCccccC
Q 003836          579 EFMSNGTVASFL---FGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY-NARISDFGLAKLLTL  654 (792)
Q Consensus       579 E~~~~gsL~~~l---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~-~~kl~Dfg~a~~~~~  654 (792)
                      ||++++.+..+.   .....+++..+..++.||+.||+|||++   +|+||||||+|||++.++ .+||+|||+++....
T Consensus        99 Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~---~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~  175 (350)
T d1q5ka_          99 DYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR  175 (350)
T ss_dssp             ECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTTCCEEECCCTTCEECCT
T ss_pred             eccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc---CCcccCCCcceEEEecCCCceeEecccchhhccC
Confidence            999876444333   3456789999999999999999999998   999999999999999775 899999999987654


Q ss_pred             CCCCccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH-------HHHhhcc-
Q 003836          655 DQSHTNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW-------AYDRYQE-  725 (792)
Q Consensus       655 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~-------~~~~~~~-  725 (792)
                      ..  ......||+.|+|||.+.+ ..++.++||||+||++|||++|+.||...........+...       ....... 
T Consensus       176 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~  253 (350)
T d1q5ka_         176 GE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN  253 (350)
T ss_dssp             TS--CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC-
T ss_pred             Cc--ccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccc
Confidence            33  2234568999999998765 57899999999999999999999999755332111110000       0000000 


Q ss_pred             ---cchhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          726 ---RTLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       726 ---~~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                         ...................++++.+|+.+||+.||++|||++|+++.
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  303 (350)
T d1q5ka_         254 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH  303 (350)
T ss_dssp             --CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence               00000000001111122345678899999999999999999999964

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-40  Score=355.85  Aligned_cols=265  Identities=19%  Similarity=0.223  Sum_probs=194.2

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc-ccchHHHHHHHHHhcccCCCCcccccceeccCC----ceEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF-QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQ----NRLLV  577 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~-~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~----~~~lV  577 (792)
                      +.+.++||+|+||+||+|.. ..+++.||||++.+.. ....+.+.+|+.+|++++||||+++++++....    ..+++
T Consensus        10 Y~~~~~LG~G~fg~Vy~~~~-~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l   88 (345)
T d1pmea_          10 YTNLSYIGEGAYGMVCSAYD-NVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYL   88 (345)
T ss_dssp             EEEEEECC---CCCEEEEEE-TTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred             eEEEEEEeeccCeEEEEEEE-CCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEE
Confidence            34457899999999999974 4567899999997543 234567899999999999999999999996553    34566


Q ss_pred             EEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCCCC
Q 003836          578 YEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLDQS  657 (792)
Q Consensus       578 ~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~~~  657 (792)
                      ++|+.+|+|.+++.. ..+++..+..++.||+.||+|||++   +|+||||||+||||++++.+||+|||+++.......
T Consensus        89 ~~~~~~g~L~~~l~~-~~l~~~~i~~i~~qil~al~yLH~~---~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~  164 (345)
T d1pmea_          89 VTHLMGADLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD  164 (345)
T ss_dssp             EEECCCEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGC
T ss_pred             EEeecCCchhhhhhc-CCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCcceEEECCCCCEEEcccCceeeccCCCc
Confidence            677889999999964 4689999999999999999999998   999999999999999999999999999987654332


Q ss_pred             C--ccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHH-------HHhhcccc
Q 003836          658 H--TNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWA-------YDRYQERT  727 (792)
Q Consensus       658 ~--~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~  727 (792)
                      .  ......||+.|+|||.+.. ..++.++||||+||+++||++|+.||................       ........
T Consensus       165 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (345)
T d1pmea_         165 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK  244 (345)
T ss_dssp             BCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHH
T ss_pred             cceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhh
Confidence            2  2344569999999999854 567899999999999999999999997653321111000000       00000000


Q ss_pred             hhHhhhc-hhcccCC-----HHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          728 LEALVEN-DLEAMNN-----VTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       728 ~~~~~~~-~~~~~~~-----~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                      ....... ......+     ...+.++.+|+.+||+.||++|||++|+++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         245 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             HHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            0000000 0000001     1223578899999999999999999999985

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.3e-40  Score=352.74  Aligned_cols=267  Identities=24%  Similarity=0.270  Sum_probs=192.3

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceeccCC------ce
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDEGQ------NR  574 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~~------~~  574 (792)
                      +...++||+|+||+||+|.. ..+++.||||+++...  ....+.+.+|+++|++++|||||+++++|...+      +.
T Consensus        20 Y~~i~~lG~G~fg~V~~~~~-~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~   98 (346)
T d1cm8a_          20 YRDLQPVGSGAYGAVCSAVD-GRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDF   98 (346)
T ss_dssp             EEEEEEC------CEEEEEE-TTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCC
T ss_pred             EEEEEEEecCCCeEEEEEEE-CCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceE
Confidence            34457899999999999964 4567899999997532  233567899999999999999999999997654      57


Q ss_pred             EEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccC
Q 003836          575 LLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTL  654 (792)
Q Consensus       575 ~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~  654 (792)
                      ++||||+ +.+|..++. ...+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+||+|||+++....
T Consensus        99 ~lv~e~~-~~~l~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~---~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~  173 (346)
T d1cm8a_          99 YLVMPFM-GTDLGKLMK-HEKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQADS  173 (346)
T ss_dssp             EEEEECC-SEEHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             EEEEecc-cccHHHHHH-hccccHHHHHHHHHHHHHHHHHHHhC---CCcccccCcchhhcccccccccccccceeccCC
Confidence            9999999 456666553 45789999999999999999999998   999999999999999999999999999987643


Q ss_pred             CCCCccccccccCCccccccccc-CCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHH-------HHHhhccc
Q 003836          655 DQSHTNTAIRGTKGYVAPEWFRN-MPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDW-------AYDRYQER  726 (792)
Q Consensus       655 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~-------~~~~~~~~  726 (792)
                      .    .+...||+.|+|||.+.+ ..++.++||||+||++|||++|+.||...............       ........
T Consensus       174 ~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (346)
T d1cm8a_         174 E----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSD  249 (346)
T ss_dssp             S----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCH
T ss_pred             c----cccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcch
Confidence            2    234568999999999876 45789999999999999999999999765322111100000       00000000


Q ss_pred             chhHhhhc--hh----cccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH--hccCcCC
Q 003836          727 TLEALVEN--DL----EAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM--LEGVVEV  779 (792)
Q Consensus       727 ~~~~~~~~--~~----~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~--L~~~~~~  779 (792)
                      ........  ..    ...........+.+|+.+||+.||++|||++|+++.  ++.+.+.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~~~  310 (346)
T d1cm8a_         250 EAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDT  310 (346)
T ss_dssp             HHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC--
T ss_pred             hhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCCCc
Confidence            00000000  00    000112234677899999999999999999999986  6665433

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=9.1e-40  Score=349.84  Aligned_cols=257  Identities=20%  Similarity=0.291  Sum_probs=195.3

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccC-CCCcccccceecc--CCceEEEEE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH-HKNLVRLLGYCDE--GQNRLLVYE  579 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~g~~~~--~~~~~lV~E  579 (792)
                      +.+.++||+|+||+||+|.. ..+++.||||+++..   ..+++.+|+++|++++ ||||+++++++..  ....++|||
T Consensus        37 y~i~~~LG~G~fg~V~~a~~-~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e  112 (328)
T d3bqca1          37 YQLVRKLGRGKYSEVFEAIN-ITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE  112 (328)
T ss_dssp             EEEEEEEEECSSEEEEEEEE-TTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEE
T ss_pred             eEEEEEEecCcCeEEEEEEE-CCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEe
Confidence            45568899999999999974 456789999998753   3578899999999995 9999999999864  456899999


Q ss_pred             eccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCC-CeEEeecCCCccccCCCCC
Q 003836          580 FMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHY-NARISDFGLAKLLTLDQSH  658 (792)
Q Consensus       580 ~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~-~~kl~Dfg~a~~~~~~~~~  658 (792)
                      |+++++|..+.   +.+++..+..++.||+.||+|||++   +|+||||||+|||++.++ .+||+|||+++......  
T Consensus       113 ~~~~~~L~~~~---~~l~e~~i~~i~~qil~aL~~LH~~---gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~--  184 (328)
T d3bqca1         113 HVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ--  184 (328)
T ss_dssp             CCCSCBGGGTT---TSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTC--
T ss_pred             ecCCCcHHHHh---cCCCHHHHHHHHHHHHHHHHHHhhc---ccccccccccceEEcCCCCeeeecccccceeccCCC--
Confidence            99999998875   4689999999999999999999999   999999999999998655 69999999998765432  


Q ss_pred             ccccccccCCcccccccccC-CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhH-H---------HHHHHhhcc--
Q 003836          659 TNTAIRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAIL-T---------DWAYDRYQE--  725 (792)
Q Consensus       659 ~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~-~---------~~~~~~~~~--  725 (792)
                      ......+|+.|+|||.+.+. .++.++||||+||+++||++|+.||............ .         .+.......  
T Consensus       185 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~  264 (328)
T d3bqca1         185 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELD  264 (328)
T ss_dssp             CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCC
T ss_pred             cccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccC
Confidence            23445689999999998764 5799999999999999999999999654332211110 0         000000000  


Q ss_pred             cchhHhhh--------chhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHH
Q 003836          726 RTLEALVE--------NDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQ  771 (792)
Q Consensus       726 ~~~~~~~~--------~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~  771 (792)
                      ........        ...........+.++.+|+.+||+.||++|||++|+++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         265 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  318 (328)
T ss_dssp             GGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            00000000        00011111234567889999999999999999999988

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=3.3e-40  Score=346.79  Aligned_cols=258  Identities=16%  Similarity=0.202  Sum_probs=201.4

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCC-CCcccccceeccCCceEEEEEec
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHH-KNLVRLLGYCDEGQNRLLVYEFM  581 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h-~niv~l~g~~~~~~~~~lV~E~~  581 (792)
                      +.+.++||+|+||+||+|... .+++.||||++....  ....+.+|++.++.++| +|++.+++++.++...++||||+
T Consensus         7 Y~i~~~iG~G~fG~Vy~a~~~-~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~   83 (293)
T d1csna_           7 YKVGRRIGEGSFGVIFEGTNL-LNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL   83 (293)
T ss_dssp             EEEEEEEEECSSCEEEEEEET-TTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred             eEEEEEEecCCCeEEEEEEEC-CCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec
Confidence            456688999999999999754 457899999886532  23457888999999865 89999999999999999999999


Q ss_pred             cCCCccccccCC-CCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcC-----CCCeEEeecCCCccccCC
Q 003836          582 SNGTVASFLFGD-SKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDD-----HYNARISDFGLAKLLTLD  655 (792)
Q Consensus       582 ~~gsL~~~l~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~-----~~~~kl~Dfg~a~~~~~~  655 (792)
                       +++|.+++... ..+++..+..++.|++.||+|||++   +|+||||||+|||++.     ++.+||+|||+|+.....
T Consensus        84 -~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~---giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~  159 (293)
T d1csna_          84 -GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP  159 (293)
T ss_dssp             -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred             -CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHC---CceeccCCccceeecCcccccCCceEEcccceeEEcccC
Confidence             67999888654 4689999999999999999999999   9999999999999974     578999999999986543


Q ss_pred             CCC------ccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHHHHhhcccchh
Q 003836          656 QSH------TNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWAYDRYQERTLE  729 (792)
Q Consensus       656 ~~~------~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  729 (792)
                      ...      ......||+.|||||.+.+..++.++|||||||++|||++|+.||................... ......
T Consensus       160 ~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~-~~~~~~  238 (293)
T d1csna_         160 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKK-QSTPLR  238 (293)
T ss_dssp             TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHH-HHSCHH
T ss_pred             ccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhcc-CCCChH
Confidence            221      2334679999999999999999999999999999999999999997543321111111100000 000111


Q ss_pred             HhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHHhccCc
Q 003836          730 ALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQMLEGVV  777 (792)
Q Consensus       730 ~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~L~~~~  777 (792)
                      ++     .    ...++++.+++..|++.+|++||+++.+.+.|++++
T Consensus       239 ~l-----~----~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~  277 (293)
T d1csna_         239 EL-----C----AGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVL  277 (293)
T ss_dssp             HH-----T----TTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred             Hh-----c----CCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence            11     1    112356888999999999999999999988887653

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-39  Score=348.55  Aligned_cols=260  Identities=24%  Similarity=0.257  Sum_probs=187.3

Q ss_pred             hhhhhcCccccceEEEeeecCCCceEEEEEEccccc--ccchHHHHHHHHHhcccCCCCcccccceecc------CCceE
Q 003836          504 GFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVF--QDSEKEFKAEVNGIGQTHHKNLVRLLGYCDE------GQNRL  575 (792)
Q Consensus       504 ~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~------~~~~~  575 (792)
                      .+.++||+|+||+||+|.. ..+++.||||++....  ....+++.+|+.++++++|||||++++++..      ....+
T Consensus        20 ~i~~~LG~G~fg~V~~~~d-~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~   98 (355)
T d2b1pa1          20 QNLKPIGSGAQGIVCAAYD-AVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY   98 (355)
T ss_dssp             EEEEECSCC--CEEEEEEE-TTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEE
T ss_pred             EEEEEeecCcCeEEEEEEE-CCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCceeE
Confidence            3457899999999999964 4567899999997543  2334578999999999999999999999953      46789


Q ss_pred             EEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCC
Q 003836          576 LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD  655 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~  655 (792)
                      +||||+.++.+... .  ..+++..+..++.||+.||+|||+.   +|+||||||+|||++.++.+|++|||+++.....
T Consensus        99 iv~Ey~~~~l~~~~-~--~~~~~~~i~~~~~qil~gl~~LH~~---giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~  172 (355)
T d2b1pa1          99 LVMELMDANLCQVI-Q--MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS  172 (355)
T ss_dssp             EEEECCSEEHHHHH-T--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred             EEEeccchHHHHhh-h--cCCCHHHHHHHHHHHHHHHHHhhhc---ccccccCCccccccccccceeeechhhhhccccc
Confidence            99999987655443 2  4578999999999999999999999   9999999999999999999999999998865432


Q ss_pred             CCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHH------------------
Q 003836          656 QSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTD------------------  717 (792)
Q Consensus       656 ~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~------------------  717 (792)
                        .......+|+.|+|||.+.+..++.++||||+||+++||++|+.||..............                  
T Consensus       173 --~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  250 (355)
T d2b1pa1         173 --FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR  250 (355)
T ss_dssp             ----------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHH
T ss_pred             --cccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHH
Confidence              233445689999999999999999999999999999999999999965432211100000                  


Q ss_pred             -HHHHhh--cccchhHhhhchhcc---cCCHHHHHHHHHHHHHccccCCCCCCCHHhHHHH
Q 003836          718 -WAYDRY--QERTLEALVENDLEA---MNNVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM  772 (792)
Q Consensus       718 -~~~~~~--~~~~~~~~~~~~~~~---~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~  772 (792)
                       ......  ...............   ......+.++.+|+.+||+.||++|||++|+++.
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H  311 (355)
T d2b1pa1         251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH  311 (355)
T ss_dssp             HHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence             000000  000001111111111   1123457789999999999999999999999974

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-38  Score=341.13  Aligned_cols=266  Identities=21%  Similarity=0.249  Sum_probs=194.4

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccc--cchHHHHHHHHHhcccCCCCcccccceeccC-----CceE
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ--DSEKEFKAEVNGIGQTHHKNLVRLLGYCDEG-----QNRL  575 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~--~~~~~~~~Ei~~l~~l~h~niv~l~g~~~~~-----~~~~  575 (792)
                      +...++||+|+||+||+|.. ..+++.||||++++...  ...+.+.+|++++++++|||||++++++...     ...+
T Consensus        20 Y~i~~~LG~G~fg~Vy~a~~-~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~   98 (348)
T d2gfsa1          20 YQNLSPVGSGAYGSVCAAFD-TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDV   98 (348)
T ss_dssp             EEEEEECGGGTTSSEEEEEE-TTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCC
T ss_pred             eEEEEEEecCCCeEEEEEEE-CCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceE
Confidence            34457899999999999964 45678999999975432  3346789999999999999999999998533     3457


Q ss_pred             EEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeecCCCccccCC
Q 003836          576 LVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDFGLAKLLTLD  655 (792)
Q Consensus       576 lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~~~~~  655 (792)
                      +++||+.+|+|.+++.. +.+++..+..++.||+.||+|||++   +|+||||||+|||++.++.+|++|||++..... 
T Consensus        99 ~i~~~~~gg~L~~~~~~-~~l~e~~~~~i~~qil~aL~~LH~~---giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~-  173 (348)
T d2gfsa1          99 YLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD-  173 (348)
T ss_dssp             EEEEECCSEEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCC----CCTG-
T ss_pred             EEEEeecCCchhhhccc-ccccHHHHHHHHHHHHHHHHHHHhC---CCcccccCCccccccccccccccccchhcccCc-
Confidence            77888899999999855 4689999999999999999999999   999999999999999999999999999976432 


Q ss_pred             CCCccccccccCCcccccccccC-CCCcccceehHHHHHHHHHhcCcCCCcchhhhhhhhHHHHH-------HHhhcccc
Q 003836          656 QSHTNTAIRGTKGYVAPEWFRNM-PITVKVDVYSYGVLLLEIICLRRNIDNEISKVDKAILTDWA-------YDRYQERT  727 (792)
Q Consensus       656 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~  727 (792)
                         ......|++.|+|||.+.+. .++.++|||||||++|||++|+.||................       ........
T Consensus       174 ---~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  250 (348)
T d2gfsa1         174 ---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES  250 (348)
T ss_dssp             ---GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHH
T ss_pred             ---ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchh
Confidence               23345689999999987665 56899999999999999999999997653321111110000       00000000


Q ss_pred             hhHhhhchhc-ccC-----CHHHHHHHHHHHHHccccCCCCCCCHHhHHHH--hccCc
Q 003836          728 LEALVENDLE-AMN-----NVTMLHRFVMVAFWCIQEDPSHRPTMRKVTQM--LEGVV  777 (792)
Q Consensus       728 ~~~~~~~~~~-~~~-----~~~~~~~l~~l~~~Cl~~~p~~RPs~~evl~~--L~~~~  777 (792)
                      .......... ...     ....+.++.+|+.+||+.||++|||++|+++.  +.+..
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~  308 (348)
T d2gfsa1         251 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH  308 (348)
T ss_dssp             HHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             hhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCC
Confidence            0000000000 000     01234678899999999999999999999974  55443

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.7e-34  Score=313.18  Aligned_cols=276  Identities=20%  Similarity=0.221  Sum_probs=195.3

Q ss_pred             hhhhhhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccC-----------CCCcccccceecc-
Q 003836          503 RGFKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH-----------HKNLVRLLGYCDE-  570 (792)
Q Consensus       503 ~~~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-----------h~niv~l~g~~~~-  570 (792)
                      |.+.++||+|+||+||+|+. ..+++.||||++++.. ...+.+.+|+.++++++           |+||+++++++.. 
T Consensus        15 Y~i~~~LG~G~fg~Vy~~~~-~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~   92 (362)
T d1q8ya_          15 YILVRKLGWGHFSTVWLAKD-MVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   92 (362)
T ss_dssp             EEEEEEEEECSSEEEEEEEE-TTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             EEEEEEEeeCCCeEEEEEEE-CCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence            55678999999999999974 3567899999997542 23467788998888875           5779999988854 


Q ss_pred             -CCceEEEEEeccCCCccccc---cCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCC------
Q 003836          571 -GQNRLLVYEFMSNGTVASFL---FGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYN------  640 (792)
Q Consensus       571 -~~~~~lV~E~~~~gsL~~~l---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~------  640 (792)
                       ....+++++++..+......   .....+++..+..++.||+.||+|||+.  .+|+||||||+||||+.++.      
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~--~~IvHrDlKp~NIll~~~~~~~~~~~  170 (362)
T d1q8ya_          93 GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRR--CGIIHTDIKPENVLMEIVDSPENLIQ  170 (362)
T ss_dssp             ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHT--TCEECSCCSGGGEEEEEEETTTTEEE
T ss_pred             cccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhh--cCcccccCChhHeeeeccCcccccce
Confidence             34566777777655433222   2335678899999999999999999983  28999999999999986653      


Q ss_pred             eEEeecCCCccccCCCCCccccccccCCcccccccccCCCCcccceehHHHHHHHHHhcCcCCCcchhhhh---hhhHHH
Q 003836          641 ARISDFGLAKLLTLDQSHTNTAIRGTKGYVAPEWFRNMPITVKVDVYSYGVLLLEIICLRRNIDNEISKVD---KAILTD  717 (792)
Q Consensus       641 ~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k~DV~S~Gv~l~el~tg~~p~~~~~~~~~---~~~~~~  717 (792)
                      +|++|||.+......    .....||+.|+|||.+....++.++||||+||+++||++|+.||........   ...+..
T Consensus       171 ~kl~dfg~s~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~  246 (362)
T d1q8ya_         171 IKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQ  246 (362)
T ss_dssp             EEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHH
T ss_pred             eeEeecccccccccc----cccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHH
Confidence            999999999865422    2345689999999999999999999999999999999999999965432111   000000


Q ss_pred             HHHHh-------hcc-c---------------------chhHhhhchhcccCCHHHHHHHHHHHHHccccCCCCCCCHHh
Q 003836          718 WAYDR-------YQE-R---------------------TLEALVENDLEAMNNVTMLHRFVMVAFWCIQEDPSHRPTMRK  768 (792)
Q Consensus       718 ~~~~~-------~~~-~---------------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~Cl~~~p~~RPs~~e  768 (792)
                      .....       ... .                     .......  .........+.++.+|+.+||+.||.+|||++|
T Consensus       247 ~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e  324 (362)
T d1q8ya_         247 IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLT--EKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG  324 (362)
T ss_dssp             HHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHH--HTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHH
T ss_pred             HHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcc--cccccCcccCHHHHHHHHHHCCCChhHCcCHHH
Confidence            00000       000 0                     0000000  112234567889999999999999999999999


Q ss_pred             HHHH--hccC---cCCCCCCCCCCC
Q 003836          769 VTQM--LEGV---VEVPIPPCPWTL  788 (792)
Q Consensus       769 vl~~--L~~~---~~~~~p~~P~~~  788 (792)
                      +++.  +++.   -++..|+.|.+.
T Consensus       325 ~L~Hp~f~~~~~~~~~~~p~~~~~~  349 (362)
T d1q8ya_         325 LVNHPWLKDTLGMEEIRVPDRELYG  349 (362)
T ss_dssp             HHTCGGGTTCTTCTTCCCTTSCTTC
T ss_pred             HhcCcccCCCCCcccCCCCCcccCC
Confidence            9985  5433   345566655443

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.83  E-value=2.4e-21  Score=188.66  Aligned_cols=162  Identities=12%  Similarity=0.144  Sum_probs=118.7

Q ss_pred             hhhhcCccccceEEEeeecCCCceEEEEEEcccccc------------------cchHHHHHHHHHhcccCCCCcccccc
Q 003836          505 FKEELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQ------------------DSEKEFKAEVNGIGQTHHKNLVRLLG  566 (792)
Q Consensus       505 ~~~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~Ei~~l~~l~h~niv~l~g  566 (792)
                      +.++||+|+||+||+|...  +++.||||+++....                  .....+.+|...+.+++|.+++..++
T Consensus         4 vg~~IG~G~~g~Vy~a~~~--~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~   81 (191)
T d1zara2           4 IGKLMGEGKESAVFNCYSE--KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYA   81 (191)
T ss_dssp             EEEEEEECSSEEEEEEEET--TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEE
T ss_pred             hCCEeeeCcceEEEEEECC--CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEE
Confidence            4578999999999999764  467899998653110                  01234567888999999999998876


Q ss_pred             eeccCCceEEEEEeccCCCccccccCCCCCchhHHHHHHHHHHHHHHHHhhccCCCeEecCCCCCcEEEcCCCCeEEeec
Q 003836          567 YCDEGQNRLLVYEFMSNGTVASFLFGDSKPNWKLRTEIAMGIAGGLFYLHEECCTQIIHCDIKPQNILLDDHYNARISDF  646 (792)
Q Consensus       567 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~dikp~NILl~~~~~~kl~Df  646 (792)
                      +..    .+++|||+++..+.+       ++.....+++.|++++|+|||+.   +|+||||||+|||++++ .++|+||
T Consensus        82 ~~~----~~lvme~~~~~~~~~-------l~~~~~~~i~~ql~~~l~~lH~~---giiHrDiKP~NILv~~~-~~~liDF  146 (191)
T d1zara2          82 WEG----NAVLMELIDAKELYR-------VRVENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVSEE-GIWIIDF  146 (191)
T ss_dssp             EET----TEEEEECCCCEEGGG-------CCCSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEETT-EEEECCC
T ss_pred             ecC----CEEEEEeeccccccc-------hhhHHHHHHHHHHHHHHHHHhhC---CEEEccCChhheeeeCC-CEEEEEC
Confidence            642    379999999865544       34555678999999999999998   99999999999999976 4999999


Q ss_pred             CCCccccCCCCCccccccccCCccc------ccccccCCCCcccceehHHHHH
Q 003836          647 GLAKLLTLDQSHTNTAIRGTKGYVA------PEWFRNMPITVKVDVYSYGVLL  693 (792)
Q Consensus       647 g~a~~~~~~~~~~~~~~~gt~~y~a------PE~~~~~~~~~k~DV~S~Gv~l  693 (792)
                      |.|+....+....         |..      .|.+ ...|+.++|+||..--+
T Consensus       147 G~a~~~~~~~~~~---------~l~rd~~~~~~~f-~r~y~~~~d~~s~~~~~  189 (191)
T d1zara2         147 PQSVEVGEEGWRE---------ILERDVRNIITYF-SRTYRTEKDINSAIDRI  189 (191)
T ss_dssp             TTCEETTSTTHHH---------HHHHHHHHHHHHH-HHHHCCCCCHHHHHHHH
T ss_pred             CCcccCCCCCcHH---------HHHHHHHHHHHHH-cCCCCCcccHHHHHHHH
Confidence            9997654222111         111      1111 35678899999975443

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

Probab=99.82  E-value=2.3e-20  Score=163.67  Aligned_cols=111  Identities=16%  Similarity=0.345  Sum_probs=92.0

Q ss_pred             cCcccCCcceeecCCCCceecCCCeEEEeeeecCCCCceEEEEEeecCCCCcEEEEecCCCCCCCCeeEEEEeCccEEEE
Q 003836           23 NGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAVNPAPRGSKLRLTANRGLVLE  102 (792)
Q Consensus        23 ~~~i~~g~~l~~~~~~~~lvS~~g~F~lGF~~~~~~~~~~~gIW~~~~~~~tvvWvANr~~P~~~~~~l~~~~~G~Lvl~  102 (792)
                      +|+|.|||.|.+++   .|+  +|.|+|+|+.+++     |.|+.    ..++||.||++.|.. .+.+.|+.||+|+|.
T Consensus         1 tDtL~~gq~L~~g~---~l~--~g~~~l~~q~DGN-----Lvly~----~~~~vW~s~~~~~~~-~~~l~l~~dGnLvl~   65 (112)
T d1xd5a_           1 SDRLNSGHQLDTGG---SLA--EGGYLFIIQNDCN-----LVLYD----NNRAVWASGTNGKAS-GCVLKMQNDGNLVIY   65 (112)
T ss_dssp             CCEEETTEEECTTC---EEE--ETTEEEEECTTSC-----EEEEE----TTEEEEECCCTTSCS-SEEEEECTTSCEEEE
T ss_pred             CCEecCCCEecCCC---EEE--ECCEEEEEcCCCC-----EEEEc----CCcEEEEccCccCCC-CcEEEEeccccEEEE
Confidence            48999999998765   676  5999999998765     34544    368999999998853 478999999999999


Q ss_pred             cCCCCEEEEeccCCC-cceeEEEecCCcEEEEecCCccccccccCCcc
Q 003836          103 DPEGREIWKSEISTG-QAAFGVLYDTGNFLIVNTNSERLWQSFDHPTD  149 (792)
Q Consensus       103 ~~~~~~vWst~~~~~-~~~~a~LldsGNlVl~~~~~~~lWQSFd~PtD  149 (792)
                      |. +.++|+++++.. +..+|+|+|+|||||++.++.++|||+.+|++
T Consensus        66 ~~-~~~~w~s~t~~~~~~~~l~L~ddGNlvly~~~~~~~W~S~t~~~n  112 (112)
T d1xd5a_          66 SG-SRAIWASNTNRQNGNYYLILQRDRNVVIYDNSNNAIWATHTNVGN  112 (112)
T ss_dssp             ET-TEEEEECCCCCSCCCCEEEECTTSCEEEECTTSCEEEECCCCCCC
T ss_pred             ec-CCeEEEEeeccCCCceEEEEcCCCCEEEECCCCcEEecCCCccCC
Confidence            96 567888776544 45689999999999999999999999999985

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=99.80  E-value=5.7e-20  Score=159.46  Aligned_cols=107  Identities=21%  Similarity=0.338  Sum_probs=88.9

Q ss_pred             cCcccCCcceeecCCCCceecCCCeEEEeeeecCCCCceEEEEEeecCCCCcEEEEecCCCCCCCCeeEEEEeCccEEEE
Q 003836           23 NGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAVNPAPRGSKLRLTANRGLVLE  102 (792)
Q Consensus        23 ~~~i~~g~~l~~~~~~~~lvS~~g~F~lGF~~~~~~~~~~~gIW~~~~~~~tvvWvANr~~P~~~~~~l~~~~~G~Lvl~  102 (792)
                      .|+|.+||.|.+++   .|.  +|.|.|+|+..++     |.++.    ..++||+||++.|....+.|.|+.||+|||.
T Consensus         1 ~~~L~~g~~L~~g~---~l~--~g~~~l~~q~dgn-----Lvl~~----~~~~vW~ant~~~~~~~~~l~l~~dGnLvl~   66 (109)
T d1kj1a_           1 RNLLTNGEGLYAGQ---SLD--VEPYHFIMQEDCN-----LVLYD----HSTSVWASNTGILGKKGCKAVLQSDGNFVVY   66 (109)
T ss_dssp             CCEEETTCEEETTC---EEE--ETTEEEEECTTSC-----EEEEE----TTEEEEECCCCCTTCCCCEEEECTTSCEEEE
T ss_pred             CCCccCCCEEeCCC---EEE--eCCEEEEecCCCe-----EEEEe----CCEEEEEeCCCCCCceeEEEEEcCCceEEEE
Confidence            37899999998765   564  5899999987654     23432    3689999999999988889999999999999


Q ss_pred             cCCCCEEEEeccCC-CcceeEEEecCCcEEEEecCCccccccccC
Q 003836          103 DPEGREIWKSEIST-GQAAFGVLYDTGNFLIVNTNSERLWQSFDH  146 (792)
Q Consensus       103 ~~~~~~vWst~~~~-~~~~~a~LldsGNlVl~~~~~~~lWQSFd~  146 (792)
                      |++|++||+|+++. .+..+|+|+|+|||||+++   .+|||+-|
T Consensus        67 ~~~g~~vW~s~t~~~~~~~~l~L~ddGNlvly~~---~~W~S~t~  108 (109)
T d1kj1a_          67 DAEGRSLWASHSVRGNGNYVLVLQEDGNVVIYGS---DIWSTGTY  108 (109)
T ss_dssp             CSSSCEEEECCCCCCSSCCEEEECTTSCEEEECC---EEEECCCC
T ss_pred             eCCCcEEEEEeeECCCCCEEEEEeCCCcEEEECC---CEecCCCc
Confidence            99999999999864 4456899999999999963   59999865

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

Probab=99.79  E-value=1.9e-19  Score=156.15  Aligned_cols=106  Identities=18%  Similarity=0.320  Sum_probs=87.5

Q ss_pred             cCcccCCcceeecCCCCceecCCCeEEEeeeecCCCCceEEEEEeecCCCCcEEEEecCCCCCCCCeeEEEEeCccEEEE
Q 003836           23 NGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAVNPAPRGSKLRLTANRGLVLE  102 (792)
Q Consensus        23 ~~~i~~g~~l~~~~~~~~lvS~~g~F~lGF~~~~~~~~~~~gIW~~~~~~~tvvWvANr~~P~~~~~~l~~~~~G~Lvl~  102 (792)
                      .|+|.+||.|.+++   .|  .+|.|.|.|+.+|+     |.||.    ..++||.||++.|. ..+.+.++.+|+|+|.
T Consensus         1 ~~~L~~g~~L~~G~---~l--~ng~~~l~~q~DGN-----Lvly~----~~~~vW~s~~~~~~-~~~~l~l~~~Gnlvl~   65 (108)
T d1jpca_           1 DNILYSGETLSTGE---FL--NYGSFVFIMQEDCN-----LVLYD----VDKPIWATNTGGLS-RSCFLSMQTDGNLVVY   65 (108)
T ss_dssp             CCEEETTEEECTTC---EE--EETTEEEEECTTSC-----EEEEE----TTEEEEECCCTTSC-SSCEEEECTTSCEEEE
T ss_pred             CCCccCCCEecCCC---EE--EcCCEEEEECCCCe-----EEEEe----CCceeeEeCCCCCC-CccEEEEeccceEEEE
Confidence            37899999998665   56  46999999998875     35654    35789999999884 3568999999999999


Q ss_pred             cCCCCEEEEeccCCCc-ceeEEEecCCcEEEEecCCccccccccC
Q 003836          103 DPEGREIWKSEISTGQ-AAFGVLYDTGNFLIVNTNSERLWQSFDH  146 (792)
Q Consensus       103 ~~~~~~vWst~~~~~~-~~~a~LldsGNlVl~~~~~~~lWQSFd~  146 (792)
                      |++|.+||+|++.... ..+|+|+|+|||||++.   .+||||+|
T Consensus        66 ~~~g~~vWsS~t~~~~~~~~l~L~ddGNlVly~~---~~W~S~t~  107 (108)
T d1jpca_          66 NPSNKPIWASNTGGQNGNYVCILQKDRNVVIYGT---DRWATGTH  107 (108)
T ss_dssp             CTTCCEEEECCCCCSCSCEEEEECTTSCEEEEEC---CCCCCCCC
T ss_pred             CCCccceEEccccCCCCcEEEEEcCCCCEEEeCC---CcccCCCC
Confidence            9999999999976544 45789999999999963   59999988

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.73  E-value=2.6e-18  Score=151.30  Aligned_cols=101  Identities=21%  Similarity=0.298  Sum_probs=86.9

Q ss_pred             EEEeecCCCCcEEEEecCCCCCCCC-eeEEEEeCccEEEEcCCCCEEEEeccCCCc-ceeEEEecCCcEEEEecCCcccc
Q 003836           64 AIWYYKIPSKTIVWYASAVNPAPRG-SKLRLTANRGLVLEDPEGREIWKSEISTGQ-AAFGVLYDTGNFLIVNTNSERLW  141 (792)
Q Consensus        64 gIW~~~~~~~tvvWvANr~~P~~~~-~~l~~~~~G~Lvl~~~~~~~vWst~~~~~~-~~~a~LldsGNlVl~~~~~~~lW  141 (792)
                      -|||.++++++.+|++|++.|+..+ .+|.+..||||+|.+. +.++|++++...+ ..+|+|+|+|||||+|.++.+||
T Consensus        11 ~il~~~~~~~~~~~~l~~~q~l~~g~y~L~~q~DGNLvL~~~-~~~vW~s~t~~~~~~~~~~l~~~GnLvl~d~~~~~lW   89 (120)
T d1dlpa2          11 SILYSTQGNDNHPQTLHATQSLQLSPYRLSMETDCNLVLFDR-DDRVWSTNTAGKGTGCRAVLQPNGRMDVLTNQNIAVW   89 (120)
T ss_dssp             EECCCC--CCCCCCEECSSCCCBCSSCEEEEETTTEEEEEBT-TBCCSCCCCCSSCSSCEEEEETTTEEEEEETTTEEEE
T ss_pred             eEEEcCCCCCCcccEEcCCCeeEcCCEEEEEcCCCcEEEecC-CcEEEEEccccCCCcEEEEEeCCeeEEEEcCCCCEEE
Confidence            4999999999999999999999654 4899999999999985 6789999987554 46899999999999999999999


Q ss_pred             ccccCCcccccCCCccccceEEeeeccCCCCCCCceeEeecCCCceeee
Q 003836          142 QSFDHPTDTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLLEDGNAVLN  190 (792)
Q Consensus       142 QSFd~PtDtlLpg~~l~~~~~L~S~~s~~~~s~G~~~~~~~~~g~~~~~  190 (792)
                      |||.                         +.+.|.|.+.+++||++++|
T Consensus        90 ~S~t-------------------------~~~~~~~~l~Lq~DGnlvlY  113 (120)
T d1dlpa2          90 TSGN-------------------------SRSAGRYVFVLQPDRNLAIY  113 (120)
T ss_dssp             ECCC-------------------------CCSSSCCEEEECSSSCEEEE
T ss_pred             EeCC-------------------------CCCCCcEEEEECCCCcEEEe
Confidence            9983                         23678899999999999986

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.65  E-value=2.4e-17  Score=143.46  Aligned_cols=110  Identities=18%  Similarity=0.196  Sum_probs=93.6

Q ss_pred             EEeecCCCCcEEEEecCCCCCCC-CeeEEEEeCccEEEEcCCCCEEEEeccCCCcceeEEEecCCcEEEEecCCcccccc
Q 003836           65 IWYYKIPSKTIVWYASAVNPAPR-GSKLRLTANRGLVLEDPEGREIWKSEISTGQAAFGVLYDTGNFLIVNTNSERLWQS  143 (792)
Q Consensus        65 IW~~~~~~~tvvWvANr~~P~~~-~~~l~~~~~G~Lvl~~~~~~~vWst~~~~~~~~~a~LldsGNlVl~~~~~~~lWQS  143 (792)
                      |||.-.++.+..|+.+.+.++.+ +.+|.+..||||||.+ ++.++|++++....+..|.|+|+|||||+|.++.+||||
T Consensus         3 ~~~~~~~~~~~~~tl~~~~~l~~g~~~l~~q~DGNLvL~~-~~~~vW~s~t~~~~~~~l~l~~dGNLvl~d~~~~~vWsS   81 (115)
T d1dlpa1           3 ILFGLSHEGSHPQTLHAAQSLELSSFRFTMQSDCNLVLFD-SDVRVWASNTAGATGCRAVLQSDGLLVILTAQNTIRWSS   81 (115)
T ss_dssp             CCBCSSSSSCSCSCCCTTCEECSTTEEEEECTTSCEEEEE-SSSEEECCCCCSCSCCBCCBCSSSCBCCBCTTTCCSCCC
T ss_pred             EEEecCCCCCCcceecCCCcEEcCCEEEEECCCCeEEEEc-CCeeEEEcccCCCCceEEEEeccCCEEEEccCCCEEEEc
Confidence            78877778888899999999965 4589999999999998 568999999887777899999999999999999999998


Q ss_pred             ccCCcccccCCCccccceEEeeeccCCCCCCCceeEeecCCCceeeeeeccCCCcccccccccCCc
Q 003836          144 FDHPTDTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWSNTF  209 (792)
Q Consensus       144 Fd~PtDtlLpg~~l~~~~~L~S~~s~~~~s~G~~~~~~~~~g~~~~~~~~~~~~~~~~~y~~~~~~  209 (792)
                      +.                         +.+.|.|.+.+++||++++|.         .++|.+++.
T Consensus        82 ~t-------------------------~~~~g~y~l~Lq~DGNlvlY~---------~~~Wssgt~  113 (115)
T d1dlpa1          82 GT-------------------------KGSIGNYVLVLQPDRTVTIYG---------PGLWDSGTS  113 (115)
T ss_dssp             CC-------------------------CCCSSCCEEEECSSSCEEEEC---------SEEEECSCC
T ss_pred             CC-------------------------CCCCCCEEEEECCCCcEEEeC---------CCeecCCCC
Confidence            73                         346899999999999998851         358877654

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.54  E-value=8.8e-15  Score=127.97  Aligned_cols=102  Identities=17%  Similarity=0.261  Sum_probs=82.9

Q ss_pred             CcccCCcceeecCCCCceecCCCeEEEeeeecCCCCceEEEEEeecCCCCcEEEEecCCCCCCCCeeEEEEeCccEEEEc
Q 003836           24 GTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAVNPAPRGSKLRLTANRGLVLED  103 (792)
Q Consensus        24 ~~i~~g~~l~~~~~~~~lvS~~g~F~lGF~~~~~~~~~~~gIW~~~~~~~tvvWvANr~~P~~~~~~l~~~~~G~Lvl~~  103 (792)
                      .+|.++|+|.       .++..|.|.|.|...|+-     .+ |.   ..++||.||+..|.. .+.|.|..||+|+|.|
T Consensus        15 ~~l~~~q~l~-------~~~~~~~y~l~mQ~DGNL-----VL-y~---~~~~vWssnt~~~~~-~~~l~l~~dGnLvL~d   77 (119)
T d1b2pa_          15 QILHATESLE-------ILFGTHVYRFIMQTDCNL-----VL-YD---NNNPIWATNTGGLGN-GCRAVLQPDGVLVVIT   77 (119)
T ss_dssp             CEEETTCEEE-------EEETTEEEEEEECTTSCE-----EE-EE---TTEEEEECCCTTSCS-SCEEEECTTSCEEEEC
T ss_pred             CEEeCCCeEE-------EecCCceEEEEECCCCcE-----EE-EE---CCeEEEEecCCCCCc-ceEEEEEeCCCEEEEC
Confidence            5788888873       477899999999988762     22 43   367999999987743 4789999999999999


Q ss_pred             CCCCEEEEeccCCC-cceeEEEecCCcEEEEecCCcccccccc
Q 003836          104 PEGREIWKSEISTG-QAAFGVLYDTGNFLIVNTNSERLWQSFD  145 (792)
Q Consensus       104 ~~~~~vWst~~~~~-~~~~a~LldsGNlVl~~~~~~~lWQSFd  145 (792)
                      ++|.+||++++... +..+|+|+|+|||||++   ..+|||-.
T Consensus        78 ~~g~~vWsS~t~~~~~~~~l~Lq~DGNlvlYg---~~~W~S~T  117 (119)
T d1b2pa_          78 NENVTVWQSPVAGKAGHYVLVLQPDRNVVIYG---DALWATQT  117 (119)
T ss_dssp             TTCCEEEECSCCCCSSCEEEEECTTSCEEEEE---SEEEECCC
T ss_pred             CCCcEEEECCCcCCCCceEEEEcCCCCEEEEC---CCEeccCC
Confidence            99999999998654 34579999999999995   47999964

>d1dlpa1 b.78.1.1 (A:1-115) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.30  E-value=5.8e-13  Score=115.34  Aligned_cols=98  Identities=19%  Similarity=0.249  Sum_probs=76.5

Q ss_pred             cCcccCCcceeecCCCCceecCCCeEEEeeeecCCCCceEEEEEeecCCCCcEEEEecCCCCCCCCeeEEEEeCccEEEE
Q 003836           23 NGTISIGQQLTAAESTEPWLSPSKDFALGFHQLDSKDLFLPAIWYYKIPSKTIVWYASAVNPAPRGSKLRLTANRGLVLE  102 (792)
Q Consensus        23 ~~~i~~g~~l~~~~~~~~lvS~~g~F~lGF~~~~~~~~~~~gIW~~~~~~~tvvWvANr~~P~~~~~~l~~~~~G~Lvl~  102 (792)
                      ..||.++|+|           .+|.|.|.|..+|+     |.++.    ...+||.+|...+  ..+.+.|.+||||||.
T Consensus        14 ~~tl~~~~~l-----------~~g~~~l~~q~DGN-----LvL~~----~~~~vW~s~t~~~--~~~~l~l~~dGNLvl~   71 (115)
T d1dlpa1          14 PQTLHAAQSL-----------ELSSFRFTMQSDCN-----LVLFD----SDVRVWASNTAGA--TGCRAVLQSDGLLVIL   71 (115)
T ss_dssp             CSCCCTTCEE-----------CSTTEEEEECTTSC-----EEEEE----SSSEEECCCCCSC--SCCBCCBCSSSCBCCB
T ss_pred             cceecCCCcE-----------EcCCEEEEECCCCe-----EEEEc----CCeeEEEcccCCC--CceEEEEeccCCEEEE
Confidence            4567777766           35779999998775     34543    3578999997643  3578999999999999


Q ss_pred             cCCCCEEEEeccCCC-cceeEEEecCCcEEEEecCCcccccccc
Q 003836          103 DPEGREIWKSEISTG-QAAFGVLYDTGNFLIVNTNSERLWQSFD  145 (792)
Q Consensus       103 ~~~~~~vWst~~~~~-~~~~a~LldsGNlVl~~~~~~~lWQSFd  145 (792)
                      |.++.+||++.+... +..+++|+++|||||++   ..+|+|-.
T Consensus        72 d~~~~~vWsS~t~~~~g~y~l~Lq~DGNlvlY~---~~~Wssgt  112 (115)
T d1dlpa1          72 TAQNTIRWSSGTKGSIGNYVLVLQPDRTVTIYG---PGLWDSGT  112 (115)
T ss_dssp             CTTTCCSCCCCCCCCSSCCEEEECSSSCEEEEC---SEEEECSC
T ss_pred             ccCCCEEEEcCCCCCCCCEEEEECCCCcEEEeC---CCeecCCC
Confidence            999999999998643 44579999999999994   47999853

>d1dlpa2 b.78.1.1 (A:116-235) Fetuin-binding protein Scafet precursor {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Fetuin-binding protein Scafet precursor
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.16  E-value=3.2e-11  Score=105.32  Aligned_cols=111  Identities=23%  Similarity=0.311  Sum_probs=79.4

Q ss_pred             EEecCCcEEEEecCCccccccccCCcccccCCCccccceEEeeeccCCCCCCCceeEeecCCCceeeeeeccCCCccccc
Q 003836          123 VLYDTGNFLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDA  202 (792)
Q Consensus       123 ~LldsGNlVl~~~~~~~lWQSFd~PtDtlLpg~~l~~~~~L~S~~s~~~~s~G~~~~~~~~~g~~~~~~~~~~~~~~~~~  202 (792)
                      +++|+||+|+.+.      +|+|.|++||.++|.|               ..|.|+|.++.||+++++.  ..     .+
T Consensus         4 v~~~~~n~il~~~------~~~~~~~~~l~~~q~l---------------~~g~y~L~~q~DGNLvL~~--~~-----~~   55 (120)
T d1dlpa2           4 VVANNGNSILYST------QGNDNHPQTLHATQSL---------------QLSPYRLSMETDCNLVLFD--RD-----DR   55 (120)
T ss_dssp             CCSSCCCEECCCC--------CCCCCCEECSSCCC---------------BCSSCEEEEETTTEEEEEB--TT-----BC
T ss_pred             EEEeCCCeEEEcC------CCCCCcccEEcCCCee---------------EcCCEEEEEcCCCcEEEec--CC-----cE
Confidence            4555566555432      6779999999999998               4688999999999998853  22     45


Q ss_pred             ccccCCcccccCCCcceeEEccCCcEEEEecccceeeeccccccccccEEEEEEecCCcEEEEe
Q 003836          203 YFWSNTFDTNRSNAGYRVVFNESGQLYVLRENKQRASLVPETVSAKENYLRATLNFDGVFIFYS  266 (792)
Q Consensus       203 y~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~dG~l~~y~  266 (792)
                      +|++.+...   +....+.+..+|.+.+++.++..+..+... .. ...++++|++||++++|.
T Consensus        56 vW~s~t~~~---~~~~~~~l~~~GnLvl~d~~~~~lW~S~t~-~~-~~~~~l~Lq~DGnlvlY~  114 (120)
T d1dlpa2          56 VWSTNTAGK---GTGCRAVLQPNGRMDVLTNQNIAVWTSGNS-RS-AGRYVFVLQPDRNLAIYG  114 (120)
T ss_dssp             CSCCCCCSS---CSSCEEEEETTTEEEEEETTTEEEEECCCC-CS-SSCCEEEECSSSCEEEEC
T ss_pred             EEEEccccC---CCcEEEEEeCCeeEEEEcCCCCEEEEeCCC-CC-CCcEEEEECCCCcEEEeC
Confidence            787765422   334678899999999998887776655321 11 223589999999999994

>d1b2pa_ b.78.1.1 (A:) Lectin (agglutinin) {Bluebell (Scilla campanulata) [TaxId: 81759]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Bluebell (Scilla campanulata) [TaxId: 81759]

Probab=99.12  E-value=9.2e-11  Score=101.99  Aligned_cols=84  Identities=24%  Similarity=0.381  Sum_probs=67.7

Q ss_pred             eEEEEeCccEEEEcCCCCEEEEeccCCCc-ceeEEEecCCcEEEEecCCccccccccCCcccccCCCccccceEEeeecc
Q 003836           90 KLRLTANRGLVLEDPEGREIWKSEISTGQ-AAFGVLYDTGNFLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSSRRK  168 (792)
Q Consensus        90 ~l~~~~~G~Lvl~~~~~~~vWst~~~~~~-~~~a~LldsGNlVl~~~~~~~lWQSFd~PtDtlLpg~~l~~~~~L~S~~s  168 (792)
                      .|.+..||||||.++ +.++|++++...+ .+.+.|.++|||||+|.++.++|+|.                        
T Consensus        33 ~l~mQ~DGNLVLy~~-~~~vWssnt~~~~~~~~l~l~~dGnLvL~d~~g~~vWsS~------------------------   87 (119)
T d1b2pa_          33 RFIMQTDCNLVLYDN-NNPIWATNTGGLGNGCRAVLQPDGVLVVITNENVTVWQSP------------------------   87 (119)
T ss_dssp             EEEECTTSCEEEEET-TEEEEECCCTTSCSSCEEEECTTSCEEEECTTCCEEEECS------------------------
T ss_pred             EEEECCCCcEEEEEC-CeEEEEecCCCCCcceEEEEEeCCCEEEECCCCcEEEECC------------------------
Confidence            678889999999975 5789999987554 47899999999999999999999862                        


Q ss_pred             CCCCCCCceeEeecCCCceeeeeeccCCCcccccccccCC
Q 003836          169 DTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWSNT  208 (792)
Q Consensus       169 ~~~~s~G~~~~~~~~~g~~~~~~~~~~~~~~~~~y~~~~~  208 (792)
                       +.-+.|.|.+.+++||++++|.         .+.|.+++
T Consensus        88 -t~~~~~~~~l~Lq~DGNlvlYg---------~~~W~S~T  117 (119)
T d1b2pa_          88 -VAGKAGHYVLVLQPDRNVVIYG---------DALWATQT  117 (119)
T ss_dssp             -CCCCSSCEEEEECTTSCEEEEE---------SEEEECCC
T ss_pred             -CcCCCCceEEEEcCCCCEEEEC---------CCEeccCC
Confidence             1124578999999999999862         24777655

>d1jpca_ b.78.1.1 (A:) Lectin (agglutinin) {Snowdrop (Galanthus nivalis) [TaxId: 4670]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Snowdrop (Galanthus nivalis) [TaxId: 4670]

Probab=99.06  E-value=3e-10  Score=97.26  Aligned_cols=77  Identities=23%  Similarity=0.399  Sum_probs=64.1

Q ss_pred             CeeEEEEeCccEEEEcCCCCEEEEeccCCCc-ceeEEEecCCcEEEEecCCccccccccCCcccccCCCccccceEEeee
Q 003836           88 GSKLRLTANRGLVLEDPEGREIWKSEISTGQ-AAFGVLYDTGNFLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSSR  166 (792)
Q Consensus        88 ~~~l~~~~~G~Lvl~~~~~~~vWst~~~~~~-~~~a~LldsGNlVl~~~~~~~lWQSFd~PtDtlLpg~~l~~~~~L~S~  166 (792)
                      .-.|.+..||||||.+ .+.+||++++...+ ...++|+++|||||++.++.++|+|                       
T Consensus        20 ~~~l~~q~DGNLvly~-~~~~vW~s~~~~~~~~~~l~l~~~Gnlvl~~~~g~~vWsS-----------------------   75 (108)
T d1jpca_          20 SFVFIMQEDCNLVLYD-VDKPIWATNTGGLSRSCFLSMQTDGNLVVYNPSNKPIWAS-----------------------   75 (108)
T ss_dssp             TEEEEECTTSCEEEEE-TTEEEEECCCTTSCSSCEEEECTTSCEEEECTTCCEEEEC-----------------------
T ss_pred             CEEEEECCCCeEEEEe-CCceeeEeCCCCCCCccEEEEeccceEEEECCCccceEEc-----------------------
Confidence            3578899999999997 45899999987654 4679999999999999999999986                       


Q ss_pred             ccCCCCCCCceeEeecCCCceeee
Q 003836          167 RKDTYFSRGRFQFRLLEDGNAVLN  190 (792)
Q Consensus       167 ~s~~~~s~G~~~~~~~~~g~~~~~  190 (792)
                        .+....+.|.+.+++||++++|
T Consensus        76 --~t~~~~~~~~l~L~ddGNlVly   97 (108)
T d1jpca_          76 --NTGGQNGNYVCILQKDRNVVIY   97 (108)
T ss_dssp             --CCCCSCSCEEEEECTTSCEEEE
T ss_pred             --cccCCCCcEEEEEcCCCCEEEe
Confidence              1122467888999999999986

>d1kj1a_ b.78.1.1 (A:) Lectin (agglutinin) {Garlic (Allium sativum) [TaxId: 4682]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Lectin (agglutinin)
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=99.02  E-value=4.4e-10  Score=96.28  Aligned_cols=77  Identities=27%  Similarity=0.498  Sum_probs=62.9

Q ss_pred             CeeEEEEeCccEEEEcCCCCEEEEeccCCC--cceeEEEecCCcEEEEecCCccccccccCCcccccCCCccccceEEee
Q 003836           88 GSKLRLTANRGLVLEDPEGREIWKSEISTG--QAAFGVLYDTGNFLIVNTNSERLWQSFDHPTDTLLPTQTMERGGVVSS  165 (792)
Q Consensus        88 ~~~l~~~~~G~Lvl~~~~~~~vWst~~~~~--~~~~a~LldsGNlVl~~~~~~~lWQSFd~PtDtlLpg~~l~~~~~L~S  165 (792)
                      .-.|.|..||||||.. .+.+||++++...  ....+.|.++|||||+|+++.++|+|=                     
T Consensus        20 ~~~l~~q~dgnLvl~~-~~~~vW~ant~~~~~~~~~l~l~~dGnLvl~~~~g~~vW~s~---------------------   77 (109)
T d1kj1a_          20 PYHFIMQEDCNLVLYD-HSTSVWASNTGILGKKGCKAVLQSDGNFVVYDAEGRSLWASH---------------------   77 (109)
T ss_dssp             TEEEEECTTSCEEEEE-TTEEEEECCCCCTTCCCCEEEECTTSCEEEECSSSCEEEECC---------------------
T ss_pred             CEEEEecCCCeEEEEe-CCEEEEEeCCCCCCceeEEEEEcCCceEEEEeCCCcEEEEEe---------------------
Confidence            3578888999999987 5689999998643  346789999999999999999999871                     


Q ss_pred             eccCCCCCCCceeEeecCCCceeee
Q 003836          166 RRKDTYFSRGRFQFRLLEDGNAVLN  190 (792)
Q Consensus       166 ~~s~~~~s~G~~~~~~~~~g~~~~~  190 (792)
                          +....|.|.+.+++||++++|
T Consensus        78 ----t~~~~~~~~l~L~ddGNlvly   98 (109)
T d1kj1a_          78 ----SVRGNGNYVLVLQEDGNVVIY   98 (109)
T ss_dssp             ----CCCCSSCCEEEECTTSCEEEE
T ss_pred             ----eECCCCCEEEEEeCCCcEEEE
Confidence                112457889999999999986

>d1xd5a_ b.78.1.1 (A:) Gastrodianin (antifungal protein) {Gastrodia elata [TaxId: 91201]}

class: All beta proteins
fold: beta-Prism II
superfamily: alpha-D-mannose-specific plant lectins
family: alpha-D-mannose-specific plant lectins
domain: Gastrodianin (antifungal protein)
species: Gastrodia elata [TaxId: 91201]

Probab=98.97  E-value=1.3e-09  Score=94.06  Aligned_cols=97  Identities=21%  Similarity=0.310  Sum_probs=72.9

Q ss_pred             cccccCCCccccceEEeeeccCCCCCCCceeEeecCCCceeeeeeccCCCcccccccccCCcccccCCCcceeEEccCCc
Q 003836          148 TDTLLPTQTMERGGVVSSRRKDTYFSRGRFQFRLLEDGNAVLNTINLESGFAYDAYFWSNTFDTNRSNAGYRVVFNESGQ  227 (792)
Q Consensus       148 tDtlLpg~~l~~~~~L~S~~s~~~~s~G~~~~~~~~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~g~  227 (792)
                      ||||+|||.|..|+.|++         |.|+|.++.||+++++..  .     .++|++.+...   ..+..+.+..+|.
T Consensus         1 tDtL~~gq~L~~g~~l~~---------g~~~l~~q~DGNLvly~~--~-----~~vW~s~~~~~---~~~~~l~l~~dGn   61 (112)
T d1xd5a_           1 SDRLNSGHQLDTGGSLAE---------GGYLFIIQNDCNLVLYDN--N-----RAVWASGTNGK---ASGCVLKMQNDGN   61 (112)
T ss_dssp             CCEEETTEEECTTCEEEE---------TTEEEEECTTSCEEEEET--T-----EEEEECCCTTS---CSSEEEEECTTSC
T ss_pred             CCEecCCCEecCCCEEEE---------CCEEEEEcCCCCEEEEcC--C-----cEEEEccCccC---CCCcEEEEecccc
Confidence            799999999999999964         999999999999998641  1     46887765432   3345788999999


Q ss_pred             EEEEecccceeeeccccccccccEEEEEEecCCcEEEEe
Q 003836          228 LYVLRENKQRASLVPETVSAKENYLRATLNFDGVFIFYS  266 (792)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~L~~dG~l~~y~  266 (792)
                      +.+++.++. +..+. + ......++++|+.||++++|.
T Consensus        62 Lvl~~~~~~-~w~s~-t-~~~~~~~~l~L~ddGNlvly~   97 (112)
T d1xd5a_          62 LVIYSGSRA-IWASN-T-NRQNGNYYLILQRDRNVVIYD   97 (112)
T ss_dssp             EEEEETTEE-EEECC-C-CCSCCCCEEEECTTSCEEEEC
T ss_pred             EEEEecCCe-EEEEe-e-ccCCCceEEEEcCCCCEEEEC
Confidence            998876443 33331 1 122344689999999999995

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.16  E-value=2.5e-06  Score=85.08  Aligned_cols=132  Identities=14%  Similarity=0.050  Sum_probs=93.2

Q ss_pred             cccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccC-CCCcccccceeccCCceEEEEEeccCCCccccc
Q 003836          512 GAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTH-HKNLVRLLGYCDEGQNRLLVYEFMSNGTVASFL  590 (792)
Q Consensus       512 G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~g~~~~~~~~~lV~E~~~~gsL~~~l  590 (792)
                      ++.+.||+...   +++.+.+|+...........+.+|...++.+. +--+.+++.+..+++..++||+++++.++.+..
T Consensus        25 ~s~~~v~rv~~---~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~~~  101 (263)
T d1j7la_          25 MSPAKVYKLVG---ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEY  101 (263)
T ss_dssp             CSSSEEEEEEC---SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHT
T ss_pred             CCCCcEEEEEe---CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEecccccccccc
Confidence            33468998642   34567888877654444556788888877764 444677888888888899999999998876554


Q ss_pred             cCCCCCchhHHHHHHHHHHHHHHHHhhcc---------------------------------------------------
Q 003836          591 FGDSKPNWKLRTEIAMGIAGGLFYLHEEC---------------------------------------------------  619 (792)
Q Consensus       591 ~~~~~l~~~~~~~i~~~ia~gL~yLH~~~---------------------------------------------------  619 (792)
                      ..     .....+++.++++.++.||+..                                                   
T Consensus       102 ~~-----~~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  176 (263)
T d1j7la_         102 ED-----EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKT  176 (263)
T ss_dssp             TT-----CSCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSSHHHHHHHHHH
T ss_pred             cc-----cccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccchHHHHHHHHHHh
Confidence            22     1223445566666666666431                                                   


Q ss_pred             -----CCCeEecCCCCCcEEEcCCCCeEEeecCCCcc
Q 003836          620 -----CTQIIHCDIKPQNILLDDHYNARISDFGLAKL  651 (792)
Q Consensus       620 -----~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~  651 (792)
                           ...++|+|+.|.|||+++++..-|+||+.+..
T Consensus       177 ~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         177 EKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             SCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             cCCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence                 02389999999999999877778999998864

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.50  E-value=0.00018  Score=70.58  Aligned_cols=130  Identities=16%  Similarity=0.091  Sum_probs=83.7

Q ss_pred             cCcccc-ceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCC--CCcccccceeccCCceEEEEEeccCCC
Q 003836          509 LGRGAF-GTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHH--KNLVRLLGYCDEGQNRLLVYEFMSNGT  585 (792)
Q Consensus       509 lG~G~~-g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h--~niv~l~g~~~~~~~~~lV~E~~~~gs  585 (792)
                      +..|.. +.||+...+  .+..+.+|......   ...+..|...++.+..  ..+.+++.+..+++..++|||++++.+
T Consensus        18 ~~~G~s~~~v~r~~~~--~~~~~vlK~~~~~~---~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~   92 (255)
T d1nd4a_          18 QTIGCSDAAVFRLSAQ--GRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQD   92 (255)
T ss_dssp             CSCTTSSCEEEEEECT--TSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEE
T ss_pred             cCCcccCCeEEEEEeC--CCCEEEEEeCCccC---HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeeccc
Confidence            444443 678987543  34457888765432   3356778887777643  335677888888888999999999877


Q ss_pred             ccccccCCCCCchhHHHHHHHHHHHHHHHHhh------------------------------------------------
Q 003836          586 VASFLFGDSKPNWKLRTEIAMGIAGGLFYLHE------------------------------------------------  617 (792)
Q Consensus       586 L~~~l~~~~~l~~~~~~~i~~~ia~gL~yLH~------------------------------------------------  617 (792)
                      +.+....        ..+++.++++.|+-||+                                                
T Consensus        93 ~~~~~~~--------~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (255)
T d1nd4a_          93 LLSSHLA--------PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFAR  164 (255)
T ss_dssp             TTTSCCC--------HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHH
T ss_pred             ccccccc--------HHHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHHHHHHH
Confidence            6543210        11122233333333332                                                


Q ss_pred             ---cc----CCCeEecCCCCCcEEEcCCCCeEEeecCCCcc
Q 003836          618 ---EC----CTQIIHCDIKPQNILLDDHYNARISDFGLAKL  651 (792)
Q Consensus       618 ---~~----~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~~  651 (792)
                         ..    ...++|+|+.|.|||++++..+-|+||+.+..
T Consensus       165 l~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~~  205 (255)
T d1nd4a_         165 LKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV  205 (255)
T ss_dssp             HHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             HHHhCCccCCceEEeCCCCCcceEEeCCceEEEEEchhccc
Confidence               11    12489999999999999887778999998753

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=97.09  E-value=0.00028  Score=74.18  Aligned_cols=77  Identities=14%  Similarity=0.204  Sum_probs=46.9

Q ss_pred             hhcCccccceEEEeeecCCCceEEEEEEcccc-------cccchHHHHHHHHHhcccC-C--CCcccccceeccCCceEE
Q 003836          507 EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSV-------FQDSEKEFKAEVNGIGQTH-H--KNLVRLLGYCDEGQNRLL  576 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~-------~~~~~~~~~~Ei~~l~~l~-h--~niv~l~g~~~~~~~~~l  576 (792)
                      +.||.|....||+..... +++.++||.-...       ......+...|.+.|+.+. +  ..+++++.+  +++..++
T Consensus        32 ~eig~G~~N~vfrV~~~~-~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~l  108 (392)
T d2pula1          32 QEIGDGNLNYVFHIYDQE-HDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  108 (392)
T ss_dssp             EECCSSSSEEEEEEEC-----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEeCCCceEeEEEEEeCC-CCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEE
Confidence            468999999999986543 3467888864321       1112344566777777652 2  335555544  3445689


Q ss_pred             EEEeccCCCc
Q 003836          577 VYEFMSNGTV  586 (792)
Q Consensus       577 V~E~~~~gsL  586 (792)
                      |||++++..+
T Consensus       109 vmE~L~~~~~  118 (392)
T d2pula1         109 VMEDLSHLKI  118 (392)
T ss_dssp             EECCCTTSEE
T ss_pred             EEeccCCccc
Confidence            9999987543

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=96.57  E-value=0.0029  Score=64.26  Aligned_cols=132  Identities=12%  Similarity=0.056  Sum_probs=76.2

Q ss_pred             ceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCcc--cccc-----eeccCCceEEEEEeccCCCcc
Q 003836          515 GTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNLV--RLLG-----YCDEGQNRLLVYEFMSNGTVA  587 (792)
Q Consensus       515 g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~niv--~l~g-----~~~~~~~~~lV~E~~~~gsL~  587 (792)
                      -.||+...+  +++.+++|+.+.. ....+++..|+..+..|...++.  ..+.     ........+.++++++|..+.
T Consensus        36 N~vy~v~~~--dg~~~VlK~~rp~-~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~~~  112 (325)
T d1zyla1          36 NRVYQFQDE--DRRRFVVKFYRPE-RWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFE  112 (325)
T ss_dssp             SEEEEECCT--TCCCEEEEEECTT-TSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEECC
T ss_pred             ceeEEEEcC--CCCEEEEEEeCCC-CCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcCCC
Confidence            579998765  3567999987643 23457788899888887543332  1211     223445678899999875543


Q ss_pred             cc----c----------c----CC-----CCCch-------------------hHHHHHHHHHHHHHHHHhh----ccCC
Q 003836          588 SF----L----------F----GD-----SKPNW-------------------KLRTEIAMGIAGGLFYLHE----ECCT  621 (792)
Q Consensus       588 ~~----l----------~----~~-----~~l~~-------------------~~~~~i~~~ia~gL~yLH~----~~~~  621 (792)
                      ..    +          +    ..     ...++                   ..+..+...+.+.++.+..    ....
T Consensus       113 ~~~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~  192 (325)
T d1zyla1         113 ADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTV  192 (325)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCC
T ss_pred             CCCHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhccccCCc
Confidence            21    0          0    00     01111                   1111122222223333322    2245


Q ss_pred             CeEecCCCCCcEEEcCCCCeEEeecCCCcc
Q 003836          622 QIIHCDIKPQNILLDDHYNARISDFGLAKL  651 (792)
Q Consensus       622 ~ivH~dikp~NILl~~~~~~kl~Dfg~a~~  651 (792)
                      ++||+|+++.|||++++  ..++||+-+..
T Consensus       193 ~liHgDlh~~NvL~~~~--~~~IDFdd~~~  220 (325)
T d1zyla1         193 LRLHGDCHAGNILWRDG--PMFVDLDDARN  220 (325)
T ss_dssp             EECCSSCSGGGEEESSS--EEECCCTTCCE
T ss_pred             eeecCCCCcccEEEeCC--ceEEechhccc
Confidence            79999999999999754  56899998864

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=95.67  E-value=0.013  Score=60.99  Aligned_cols=75  Identities=13%  Similarity=0.169  Sum_probs=50.2

Q ss_pred             hhcCccccceEEEeeecCC------CceEEEEEEcccccccchHHHHHHHHHhcccCCCCc-ccccceeccCCceEEEEE
Q 003836          507 EELGRGAFGTVYKGFVNMG------SSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL-VRLLGYCDEGQNRLLVYE  579 (792)
Q Consensus       507 ~~lG~G~~g~Vy~g~~~~~------~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~ni-v~l~g~~~~~~~~~lV~E  579 (792)
                      +.|+.|-.-.+|+......      ..+.|.+++...  ........+|..+++.+.-.++ .++++++.+    .+|+|
T Consensus        48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~--~~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~e  121 (395)
T d1nw1a_          48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN--PETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE  121 (395)
T ss_dssp             EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS--CCCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred             EEcCCccccceEEEEeCCCCccccCCCCcEEEEecCC--cchhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEEE
Confidence            4577788889999876532      123566666543  2334566789999888854454 577777754    68999


Q ss_pred             eccCCCcc
Q 003836          580 FMSNGTVA  587 (792)
Q Consensus       580 ~~~~gsL~  587 (792)
                      |+++..|.
T Consensus       122 fi~g~~l~  129 (395)
T d1nw1a_         122 YIPSRPLS  129 (395)
T ss_dssp             CCCEEECC
T ss_pred             EeccccCC
Confidence            99876554

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.26  E-value=0.038  Score=55.13  Aligned_cols=152  Identities=13%  Similarity=0.027  Sum_probs=78.5

Q ss_pred             CHHHHHHHHhhhh-------hhcCccccceEEEeeecCCCceEEEEEEcccccccchHHHHHHHHHhcccCCCCc--ccc
Q 003836          494 TYKELVEVTRGFK-------EELGRGAFGTVYKGFVNMGSSNHVAVKKLNSVFQDSEKEFKAEVNGIGQTHHKNL--VRL  564 (792)
Q Consensus       494 ~~~el~~~~~~~~-------~~lG~G~~g~Vy~g~~~~~~~~~vavK~~~~~~~~~~~~~~~Ei~~l~~l~h~ni--v~l  564 (792)
                      +.+|+.....++.       +.|..|.--+.|+.+.+.   ..+++|+.....  ..+++..|++++..+.+.++  ...
T Consensus         4 s~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~---g~yVLri~~~~~--~~~~l~~~~~~l~~L~~~g~pvp~p   78 (316)
T d2ppqa1           4 TEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTK---DPLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLP   78 (316)
T ss_dssp             CHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESS---CCEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred             CHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECC---CcEEEEEcCCCC--CHHHHHHHHHHHHhhhhcccccccc
Confidence            4455555544431       235667778889876543   258999876532  23455667777777644332  222


Q ss_pred             cce------eccCCceEEEEEeccCCCcccccc------------------C--CC----CC-----------------c
Q 003836          565 LGY------CDEGQNRLLVYEFMSNGTVASFLF------------------G--DS----KP-----------------N  597 (792)
Q Consensus       565 ~g~------~~~~~~~~lV~E~~~~gsL~~~l~------------------~--~~----~l-----------------~  597 (792)
                      +..      .........++.+..+......-.                  .  ..    ..                 .
T Consensus        79 i~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (316)
T d2ppqa1          79 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV  158 (316)
T ss_dssp             CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred             ceecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhc
Confidence            111      122344567777777644332110                  0  00    00                 0


Q ss_pred             hhHHHHHHHHHHHHHHHHhh-ccCCCeEecCCCCCcEEEcCCCCeEEeecCCCc
Q 003836          598 WKLRTEIAMGIAGGLFYLHE-ECCTQIIHCDIKPQNILLDDHYNARISDFGLAK  650 (792)
Q Consensus       598 ~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~dikp~NILl~~~~~~kl~Dfg~a~  650 (792)
                      .......+..+...+.-.+. ..+.++||+|+.+.||+++++...-|.||+.+.
T Consensus       159 ~~~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         159 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             chhHHHHHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEecccccc
Confidence            00111112222222222221 123479999999999999998777899999885

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.52  E-value=0.03  Score=34.51  Aligned_cols=27  Identities=30%  Similarity=0.607  Sum_probs=20.0

Q ss_pred             cCCCCCCcccccCCCCCCceecCCCCccC
Q 003836          300 SGICGFNSICSISGAKRPICQCPKGFSLL  328 (792)
Q Consensus       300 ~g~CG~~g~C~~~~~~~~~C~Cl~GF~~~  328 (792)
                      -..|| ||.|++. .....|.|-+||+|.
T Consensus         7 gnpCG-nGTCtNv-iGgFec~C~~GFepg   33 (39)
T d1emoa2           7 GNPCG-NGTCKNV-IGGFECTCEEGFEPG   33 (39)
T ss_dssp             TCSSS-SSCEEEC-SSSEEECCSSSSCCC
T ss_pred             CCccC-Cceeeec-ccceEEeecCCcCCC
Confidence            35687 6788753 345789999999974

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.34  E-value=0.094  Score=34.67  Aligned_cols=26  Identities=23%  Similarity=0.577  Sum_probs=21.5

Q ss_pred             cCCCCCCcccccCCCCCCceecCCCCc
Q 003836          300 SGICGFNSICSISGAKRPICQCPKGFS  326 (792)
Q Consensus       300 ~g~CG~~g~C~~~~~~~~~C~Cl~GF~  326 (792)
                      ...|..+|.|... ..+..|.|++||+
T Consensus        10 ~~pC~n~g~C~n~-~g~y~C~C~~G~~   35 (42)
T d2vj3a1          10 ANPCEHAGKCINT-LGSFECQCLQGYT   35 (42)
T ss_dssp             SCSSSTTCEEEEC-SSSEEEECCTTEE
T ss_pred             CCCCCCCcEeECC-CCCEEeECCCCCc
Confidence            4569999999864 4568999999997

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.64  E-value=0.076  Score=35.13  Aligned_cols=27  Identities=26%  Similarity=0.700  Sum_probs=21.0

Q ss_pred             cCCCCCCcccccCCCCCCceecCCCCccC
Q 003836          300 SGICGFNSICSISGAKRPICQCPKGFSLL  328 (792)
Q Consensus       300 ~g~CG~~g~C~~~~~~~~~C~Cl~GF~~~  328 (792)
                      .+.|. ++.|.++ .++..|.|++||.+.
T Consensus         9 ~~~C~-~~~C~Nt-~Gsy~C~C~~Gy~l~   35 (42)
T d1lmja2           9 PLLCR-GGVCHNT-EGSYRCECPPGHQLS   35 (42)
T ss_dssp             SSTTT-TSEEEEE-TTEEEEESCTTSCCC
T ss_pred             CCCCC-CCEeECC-CCCeEEeCCCCCeEC
Confidence            46785 7899864 357899999999863

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.46  E-value=0.19  Score=32.52  Aligned_cols=26  Identities=23%  Similarity=0.565  Sum_probs=21.1

Q ss_pred             cCCCCCCcccccCCCCCCceecCCCCc
Q 003836          300 SGICGFNSICSISGAKRPICQCPKGFS  326 (792)
Q Consensus       300 ~g~CG~~g~C~~~~~~~~~C~Cl~GF~  326 (792)
                      ..-|...|.|... ..+..|.|++||+
T Consensus         5 ~~PC~ngg~C~~~-~~~y~C~C~~G~~   30 (39)
T d1xkba1           5 TSPCQNQGKCKDG-LGEYTCTCLEGFE   30 (39)
T ss_dssp             TCCCCSSCEECCC-SSSCCEECCTTEE
T ss_pred             CCCCCCCcEEECC-CCCEEEECCCCCC
Confidence            4668999999863 3568999999997

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.18  E-value=0.18  Score=33.42  Aligned_cols=26  Identities=23%  Similarity=0.427  Sum_probs=20.6

Q ss_pred             CCCCCCcccccCCCCCCceecCCCCcc
Q 003836          301 GICGFNSICSISGAKRPICQCPKGFSL  327 (792)
Q Consensus       301 g~CG~~g~C~~~~~~~~~C~Cl~GF~~  327 (792)
                      +.|+.++.|.++ .++..|.|++||+.
T Consensus        11 ~~~~~~~~C~Nt-~Gsy~C~C~~Gy~~   36 (43)
T d1emoa1          11 PDVCKHGQCINT-DGSYRCECPFGYIL   36 (43)
T ss_dssp             TTSCSSSCCCCC-SSCCCCCCCTTEEE
T ss_pred             cCCCCCCEeECC-CCCeEeECCCCccc
Confidence            446678999874 46789999999985

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.42  E-value=0.16  Score=32.80  Aligned_cols=26  Identities=23%  Similarity=0.497  Sum_probs=21.2

Q ss_pred             cCCCCCCcccccCCCCCCceecCCCCc
Q 003836          300 SGICGFNSICSISGAKRPICQCPKGFS  326 (792)
Q Consensus       300 ~g~CG~~g~C~~~~~~~~~C~Cl~GF~  326 (792)
                      ..-|...|.|... ..+..|.|++||.
T Consensus         6 ~~PC~n~g~C~~~-~~~y~C~C~~G~~   31 (39)
T d2vj3a2           6 SNPCQNDATCLDQ-IGEFQCICMPGYE   31 (39)
T ss_dssp             TCCCCSSCEEEEC-SSCEEEECCTTEE
T ss_pred             CCCCCCCCEEECC-CCCEEEeCCCCCc
Confidence            4669999999863 4578999999997

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=84.95  E-value=0.13  Score=33.89  Aligned_cols=33  Identities=36%  Similarity=0.765  Sum_probs=24.3

Q ss_pred             CccccccccccCCCCcCCCCCCcccccCCCCCCceecCC-CCc
Q 003836          285 PENICINNDIRKGLGSGICGFNSICSISGAKRPICQCPK-GFS  326 (792)
Q Consensus       285 p~~~C~~~~~~~~~~~g~CG~~g~C~~~~~~~~~C~Cl~-GF~  326 (792)
                      |-|.|.         ..-|...|.|......+..|.|++ ||.
T Consensus         1 Pid~C~---------~nPC~ngG~C~~~~~~~y~C~C~~~G~~   34 (42)
T d1q4ga2           1 PVNPCC---------YYPCQHQGICVRFGLDRYQCDCTRTGYS   34 (42)
T ss_dssp             CCCGGG---------GCCCCTTCEEEEETTTEEEEECTTSSEE
T ss_pred             CCccCc---------CCCCCCCCEeeeCCCCCEEEECCCCCcC
Confidence            456676         467999999964333468999986 896

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.56  E-value=0.19  Score=33.26  Aligned_cols=27  Identities=30%  Similarity=0.754  Sum_probs=20.9

Q ss_pred             cCCCCCCcccccCCCCCCceecCCCCccC
Q 003836          300 SGICGFNSICSISGAKRPICQCPKGFSLL  328 (792)
Q Consensus       300 ~g~CG~~g~C~~~~~~~~~C~Cl~GF~~~  328 (792)
                      .+.|. ++.|.++ .++..|.|++||.+.
T Consensus        10 ~~~c~-~~~C~Nt-~Gsy~C~C~~Gy~l~   36 (43)
T d1uzka2          10 PGLCQ-GGKCINT-FGSFQCRCPTGYYLN   36 (43)
T ss_dssp             GGGGB-TSEEEEC-SSCEEEECCTTCCBC
T ss_pred             CCCcC-CCEEECC-CCCeEeECCCCCeEC
Confidence            45675 6899874 467899999999864

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=81.76  E-value=0.19  Score=32.66  Aligned_cols=25  Identities=20%  Similarity=0.531  Sum_probs=20.9

Q ss_pred             CCCCCCcccccCCCCCCceecCCCCc
Q 003836          301 GICGFNSICSISGAKRPICQCPKGFS  326 (792)
Q Consensus       301 g~CG~~g~C~~~~~~~~~C~Cl~GF~  326 (792)
                      ..|.+++.|..+ ..+..|.|.+||.
T Consensus         7 ~~C~~~A~C~Nt-~Gsy~C~C~~Gy~   31 (40)
T d1gl4a2           7 HQCSVHAECRDY-ATGFCCRCVANYT   31 (40)
T ss_dssp             GGSCTTEEEEEC-SSCEEEEECTTEE
T ss_pred             CCCCCCCEeecC-CCCeEeECCCCCc
Confidence            459999999875 4578999999997

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.57  E-value=0.3  Score=30.62  Aligned_cols=26  Identities=35%  Similarity=0.727  Sum_probs=21.0

Q ss_pred             cCCCCCCcccccCCCCCCceecCCCCc
Q 003836          300 SGICGFNSICSISGAKRPICQCPKGFS  326 (792)
Q Consensus       300 ~g~CG~~g~C~~~~~~~~~C~Cl~GF~  326 (792)
                      ..-|-..|.|... ..+..|.|++||.
T Consensus         5 ~~PC~ngg~C~~~-~~~y~C~C~~g~~   30 (35)
T d2vj3a3           5 SSPCLHNGRCLDK-INEFQCECPTGFT   30 (35)
T ss_dssp             TCCSTTTCEEEEC-SSCEEEECCTTEE
T ss_pred             CCCCCCCcEEECC-CCCeEEECCCCCC
Confidence            4669999999764 3468999999997

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.37  E-value=0.25  Score=31.87  Aligned_cols=26  Identities=31%  Similarity=0.561  Sum_probs=21.1

Q ss_pred             cCCCCCCcccccCCCCCCceecCCCCc
Q 003836          300 SGICGFNSICSISGAKRPICQCPKGFS  326 (792)
Q Consensus       300 ~g~CG~~g~C~~~~~~~~~C~Cl~GF~  326 (792)
                      ..-|-..|.|... ..+..|.|++||+
T Consensus         8 ~~PC~ngg~C~~~-~~~y~C~C~~g~~   33 (39)
T d1edmb_           8 SNPCLNGGSCKDD-INSYECWCPFGFE   33 (39)
T ss_dssp             TCCCCTTCEEEEE-TTEEEEECCTTCC
T ss_pred             CCCCCCCcEEEcC-CCCEEEECCCCCC
Confidence            4669999999763 3568999999997