Query 003839
Match_columns 792
No_of_seqs 439 out of 2107
Neff 6.1
Searched_HMMs 46136
Date Thu Mar 28 12:59:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003839.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003839hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1737 Oxysterol-binding prot 100.0 1E-112 2E-117 986.8 40.6 676 83-782 68-799 (799)
2 KOG2209 Oxysterol-binding prot 100.0 2E-96 4E-101 758.8 17.0 366 410-782 24-445 (445)
3 PF01237 Oxysterol_BP: Oxyster 100.0 1.3E-85 2.7E-90 726.0 23.2 330 429-768 1-353 (354)
4 KOG2210 Oxysterol-binding prot 100.0 1E-57 2.3E-62 496.5 19.4 315 427-768 34-378 (392)
5 cd01247 PH_GPBP Goodpasture an 99.9 9.3E-23 2E-27 183.3 12.2 89 95-221 1-90 (91)
6 cd01265 PH_PARIS-1 PARIS-1 ple 99.8 6.1E-20 1.3E-24 166.3 10.9 89 95-223 1-94 (95)
7 PF15413 PH_11: Pleckstrin hom 99.8 2.9E-20 6.3E-25 173.4 8.8 110 95-222 1-112 (112)
8 cd01233 Unc104 Unc-104 pleckst 99.8 2.5E-18 5.3E-23 157.2 12.1 91 93-223 2-98 (100)
9 cd01251 PH_centaurin_alpha Cen 99.8 2.1E-18 4.6E-23 158.6 11.7 90 95-224 1-101 (103)
10 cd01264 PH_melted Melted pleck 99.7 7.1E-18 1.5E-22 153.9 11.1 89 95-222 2-100 (101)
11 cd01238 PH_Tec Tec pleckstrin 99.7 1.4E-17 3.1E-22 153.9 11.1 91 94-222 1-106 (106)
12 cd01235 PH_SETbf Set binding f 99.7 2.4E-17 5.1E-22 149.9 11.6 89 95-223 1-101 (101)
13 PF15409 PH_8: Pleckstrin homo 99.7 3.1E-17 6.6E-22 145.9 9.8 86 97-223 1-89 (89)
14 cd01246 PH_oxysterol_bp Oxyste 99.7 7.3E-17 1.6E-21 143.0 11.8 90 95-222 1-91 (91)
15 cd01260 PH_CNK Connector enhan 99.7 5.6E-17 1.2E-21 146.6 11.0 88 95-222 2-96 (96)
16 cd01236 PH_outspread Outspread 99.7 2.3E-16 5.1E-21 145.0 11.0 88 95-221 1-102 (104)
17 cd01252 PH_cytohesin Cytohesin 99.7 8.2E-16 1.8E-20 146.0 13.0 92 95-226 2-116 (125)
18 cd01257 PH_IRS Insulin recepto 99.6 1.1E-15 2.3E-20 140.0 12.0 90 93-221 2-100 (101)
19 cd01266 PH_Gab Gab (Grb2-assoc 99.6 1E-15 2.2E-20 141.9 11.0 88 95-222 1-107 (108)
20 cd01250 PH_centaurin Centaurin 99.6 2.9E-15 6.2E-20 133.5 10.7 90 95-222 1-94 (94)
21 cd01241 PH_Akt Akt pleckstrin 99.6 5.6E-15 1.2E-19 135.6 11.4 94 93-223 1-102 (102)
22 PF00169 PH: PH domain; Inter 99.5 1.2E-13 2.7E-18 123.0 13.3 93 94-223 2-103 (104)
23 cd01245 PH_RasGAP_CG5898 RAS G 99.5 2.8E-14 6E-19 129.8 8.9 85 96-221 2-97 (98)
24 cd01244 PH_RasGAP_CG9209 RAS_G 99.5 6.3E-14 1.4E-18 127.7 10.6 85 97-222 5-98 (98)
25 cd01219 PH_FGD FGD (faciogenit 99.5 7.2E-13 1.6E-17 121.5 12.4 96 94-224 3-100 (101)
26 cd01263 PH_anillin Anillin Ple 99.4 2.6E-12 5.7E-17 121.4 10.1 92 94-222 2-122 (122)
27 cd01237 Unc112 Unc-112 pleckst 99.4 2.4E-12 5.2E-17 117.7 9.5 80 106-223 17-103 (106)
28 KOG0930 Guanine nucleotide exc 99.3 3.8E-12 8.2E-17 131.9 9.9 97 91-227 258-379 (395)
29 smart00233 PH Pleckstrin homol 99.3 2.8E-11 6.1E-16 105.9 12.8 93 94-223 2-101 (102)
30 cd01254 PH_PLD Phospholipase D 99.3 1.7E-11 3.6E-16 116.2 9.6 88 95-222 1-121 (121)
31 cd01253 PH_beta_spectrin Beta- 99.2 9.6E-11 2.1E-15 107.5 10.4 90 95-222 1-104 (104)
32 cd01220 PH_CDEP Chondrocyte-de 99.2 3.6E-10 7.8E-15 103.4 11.9 93 94-224 3-98 (99)
33 cd00821 PH Pleckstrin homology 99.1 2.9E-10 6.3E-15 98.5 9.5 91 95-222 1-96 (96)
34 KOG1739 Serine/threonine prote 99.1 8.5E-11 1.8E-15 129.4 5.3 95 92-224 23-117 (611)
35 KOG0690 Serine/threonine prote 99.0 1.9E-10 4.1E-15 122.5 5.1 101 90-227 12-120 (516)
36 KOG1090 Predicted dual-specifi 99.0 1.1E-10 2.4E-15 136.1 3.0 94 90-223 1631-1731(1732)
37 cd00900 PH-like Pleckstrin hom 99.0 5.6E-09 1.2E-13 91.1 11.5 87 96-222 2-99 (99)
38 cd01230 PH_EFA6 EFA6 Pleckstri 99.0 5.3E-09 1.1E-13 98.5 11.3 100 95-227 2-115 (117)
39 PF14593 PH_3: PH domain; PDB: 98.7 7.4E-08 1.6E-12 88.8 9.8 92 90-226 10-102 (104)
40 cd01256 PH_dynamin Dynamin ple 98.7 1.8E-07 3.8E-12 84.0 10.1 90 93-222 1-104 (110)
41 cd01218 PH_phafin2 Phafin2 Pl 98.6 3.9E-07 8.5E-12 84.1 11.9 94 94-226 5-101 (104)
42 cd01249 PH_oligophrenin Oligop 98.4 9.9E-07 2.1E-11 80.9 8.7 47 175-221 53-103 (104)
43 PF15410 PH_9: Pleckstrin homo 98.4 1.6E-06 3.6E-11 81.9 9.8 103 95-223 2-118 (119)
44 cd01234 PH_CADPS CADPS (Ca2+-d 98.3 1.1E-06 2.3E-11 79.7 6.5 94 95-224 4-111 (117)
45 cd01243 PH_MRCK MRCK (myotonic 98.3 1.1E-05 2.4E-10 75.5 12.1 99 92-224 1-120 (122)
46 KOG0521 Putative GTPase activa 98.2 4.3E-07 9.4E-12 109.6 2.5 98 91-228 272-373 (785)
47 cd01242 PH_ROK Rok (Rho- assoc 98.2 9.1E-06 2E-10 75.0 10.3 92 95-223 2-110 (112)
48 cd01261 PH_SOS Son of Sevenles 98.0 4.7E-05 1E-09 71.3 11.0 102 94-224 5-110 (112)
49 KOG3640 Actin binding protein 98.0 9.1E-06 2E-10 96.4 6.6 99 90-225 987-1108(1116)
50 cd01259 PH_Apbb1ip Apbb1ip (Am 97.9 4.9E-05 1.1E-09 70.4 9.4 100 95-223 2-108 (114)
51 cd01239 PH_PKD Protein kinase 97.9 7.2E-05 1.6E-09 69.6 9.3 88 95-222 2-117 (117)
52 cd01262 PH_PDK1 3-Phosphoinosi 97.8 7.1E-05 1.5E-09 66.8 8.2 86 94-223 2-88 (89)
53 KOG0248 Cytoplasmic protein Ma 97.8 9.8E-06 2.1E-10 93.2 3.0 97 93-227 249-345 (936)
54 PTZ00267 NIMA-related protein 97.5 0.00023 4.9E-09 82.4 8.0 98 92-224 376-477 (478)
55 KOG3723 PH domain protein Melt 97.5 7.7E-05 1.7E-09 84.7 3.6 110 87-228 729-841 (851)
56 PLN00188 enhanced disease resi 97.4 0.00068 1.5E-08 80.3 10.7 97 92-226 3-112 (719)
57 cd01258 PH_syntrophin Syntroph 97.4 0.00053 1.1E-08 63.8 7.1 99 97-221 3-107 (108)
58 KOG0705 GTPase-activating prot 97.3 0.0001 2.2E-09 83.9 1.9 38 188-225 443-481 (749)
59 PF12814 Mcp5_PH: Meiotic cell 97.3 0.0018 4E-08 61.6 10.2 33 191-223 89-121 (123)
60 KOG2059 Ras GTPase-activating 97.2 0.0006 1.3E-08 79.6 7.6 97 91-228 562-669 (800)
61 PLN02866 phospholipase D 97.2 0.0021 4.6E-08 79.0 11.6 112 91-227 180-311 (1068)
62 cd01222 PH_clg Clg (common-sit 97.1 0.0055 1.2E-07 56.1 11.2 87 94-223 5-95 (97)
63 cd01224 PH_Collybistin Collybi 96.9 0.013 2.9E-07 54.6 11.3 93 94-223 3-107 (109)
64 KOG3751 Growth factor receptor 96.9 0.0036 7.8E-08 71.2 9.0 108 88-224 312-425 (622)
65 KOG1451 Oligophrenin-1 and rel 96.7 0.0029 6.2E-08 72.6 6.4 103 90-226 262-370 (812)
66 KOG3531 Rho guanine nucleotide 96.5 0.00087 1.9E-08 79.4 0.7 95 92-226 923-1022(1036)
67 PF15406 PH_6: Pleckstrin homo 96.4 0.0076 1.6E-07 55.7 6.3 50 171-221 62-111 (112)
68 PF15404 PH_4: Pleckstrin homo 96.3 0.022 4.8E-07 58.0 9.3 32 95-126 1-32 (185)
69 cd01221 PH_ephexin Ephexin Ple 96.1 0.042 9.1E-07 52.6 9.5 79 109-220 27-119 (125)
70 KOG1117 Rho- and Arf-GTPase ac 95.9 0.031 6.7E-07 66.9 9.5 92 91-222 490-600 (1186)
71 KOG0932 Guanine nucleotide exc 95.6 0.0065 1.4E-07 69.5 2.5 117 80-228 493-622 (774)
72 KOG4424 Predicted Rho/Rac guan 95.6 0.017 3.6E-07 66.8 5.7 102 92-228 271-374 (623)
73 KOG1117 Rho- and Arf-GTPase ac 95.1 0.012 2.7E-07 70.1 2.7 94 91-225 85-179 (1186)
74 cd01240 PH_beta-ARK Beta adren 94.7 0.032 7E-07 51.6 3.6 91 93-225 3-100 (116)
75 cd01226 PH_exo84 Exocyst compl 94.3 0.4 8.6E-06 44.2 9.8 51 174-224 46-99 (100)
76 KOG0248 Cytoplasmic protein Ma 94.1 0.016 3.5E-07 67.7 0.4 92 88-222 254-347 (936)
77 cd01232 PH_TRIO Trio pleckstri 94.1 0.89 1.9E-05 43.0 11.9 53 172-224 55-113 (114)
78 cd01228 PH_BCR-related BCR (br 93.9 0.3 6.6E-06 44.4 8.1 90 94-223 4-94 (96)
79 cd01248 PH_PLC Phospholipase C 93.5 0.49 1.1E-05 44.3 9.1 34 188-221 77-114 (115)
80 PTZ00283 serine/threonine prot 93.5 0.16 3.5E-06 59.3 7.3 35 190-224 455-490 (496)
81 KOG3543 Ca2+-dependent activat 93.1 0.035 7.6E-07 64.2 0.9 93 92-225 463-567 (1218)
82 cd01225 PH_Cool_Pix Cool (clon 93.0 0.5 1.1E-05 44.2 8.2 79 107-222 26-108 (111)
83 cd01227 PH_Dbs Dbs (DBL's big 88.2 5.9 0.00013 38.5 11.0 54 172-225 61-117 (133)
84 PF15408 PH_7: Pleckstrin homo 86.8 0.33 7.2E-06 43.1 1.4 96 96-225 1-99 (104)
85 cd01223 PH_Vav Vav pleckstrin 86.0 6.2 0.00013 37.4 9.5 34 192-225 78-113 (116)
86 KOG1738 Membrane-associated gu 84.0 0.62 1.3E-05 54.9 2.3 39 91-129 560-601 (638)
87 KOG4807 F-actin binding protei 80.8 0.022 4.8E-07 62.7 -10.2 79 108-223 34-114 (593)
88 KOG3727 Mitogen inducible gene 80.3 0.34 7.4E-06 56.1 -1.5 53 172-224 400-459 (664)
89 KOG3551 Syntrophins (type beta 80.0 1.3 2.7E-05 49.6 2.7 98 92-220 291-398 (506)
90 KOG0592 3-phosphoinositide-dep 78.9 2.9 6.2E-05 49.0 5.2 93 91-228 449-542 (604)
91 KOG1170 Diacylglycerol kinase 73.0 0.18 4E-06 60.3 -6.4 91 94-225 3-96 (1099)
92 PF15405 PH_5: Pleckstrin homo 67.4 8.2 0.00018 37.5 4.6 24 200-223 112-135 (135)
93 KOG3520 Predicted guanine nucl 67.3 6 0.00013 50.1 4.5 57 173-229 667-727 (1167)
94 KOG4424 Predicted Rho/Rac guan 63.1 8.7 0.00019 45.3 4.4 92 94-225 498-597 (623)
95 cd01231 PH_Lnk LNK-family Plec 55.6 54 0.0012 30.5 7.2 36 187-222 71-107 (107)
96 KOG4236 Serine/threonine prote 53.2 48 0.001 39.3 8.1 38 185-223 474-523 (888)
97 KOG3531 Rho guanine nucleotide 49.0 10 0.00023 46.3 2.1 98 93-229 750-850 (1036)
98 PF08458 PH_2: Plant pleckstri 44.6 37 0.00079 32.1 4.6 34 191-224 71-104 (110)
99 cd01255 PH_TIAM TIAM Pleckstri 43.0 2E+02 0.0042 28.6 9.3 28 198-225 129-156 (160)
100 PF12915 DUF3833: Protein of u 38.5 71 0.0015 32.3 5.8 59 608-677 21-88 (164)
101 KOG3551 Syntrophins (type beta 37.8 28 0.00061 39.4 3.1 54 172-225 214-273 (506)
102 PF14254 DUF4348: Domain of un 37.0 40 0.00086 36.5 4.0 40 575-614 225-266 (273)
103 KOG2070 Guanine nucleotide exc 37.0 48 0.001 38.6 4.9 79 107-222 323-405 (661)
104 KOG3523 Putative guanine nucle 32.0 71 0.0015 38.3 5.3 20 201-220 572-591 (695)
105 PF10504 DUF2452: Protein of u 26.2 53 0.0012 32.9 2.6 26 505-530 84-109 (159)
106 cd05135 RasGAP_RASAL Ras GTPas 21.1 28 0.00061 39.0 -0.4 26 92-117 302-333 (333)
No 1
>KOG1737 consensus Oxysterol-binding protein [Lipid transport and metabolism]
Probab=100.00 E-value=1.1e-112 Score=986.83 Aligned_cols=676 Identities=38% Similarity=0.609 Sum_probs=534.5
Q ss_pred ccccccCCCCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhccccccc
Q 003839 83 VDVKINDIVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKET 162 (792)
Q Consensus 83 ~~~~~~~~~~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~ 162 (792)
.+..... .+...+|||+||+|++++|++|||+|.+|.|+||++.+..+..+..........|+.+.-.-+.+.+.+...
T Consensus 68 ~~~~~~~-~~~~~~g~l~k~~n~~~~~~~r~f~l~~g~ls~~~~~~~~~~~~~~~~~~~~a~i~~~~~~~~~~~~~~~q~ 146 (799)
T KOG1737|consen 68 SEAGIKK-SGASLEGILLKWRNYSKGPSSRWFVLSGGLLSYYFDNSFSKTTCGGGINLVTAWIQNGERMDICSVDGSCQI 146 (799)
T ss_pred ccccccc-ccccccceeeccccccCCcccceEEecCcceeeeccCCccccCCCCcccccccccccCCCcccchhhcccch
Confidence 3333334 677899999999999999999999999999999999999887776666777777776543222222222222
Q ss_pred cccc----ccCCCcceEEEcC-ceEEEecCCCCCcEEEEeCCeEEEEEcCC---H-HHHHHHHHHHHHHHHhcccccCCC
Q 003839 163 TSQR----LLNRKPFGEVHLK-VSSIRDSKSDDKRFSIFTGTKRLHLRAET---R-EDRFAWMEALQAVKDMFPRMSNSE 233 (792)
Q Consensus 163 ~~~~----~~~~~p~G~I~L~-~ssi~~~~~d~~~F~I~t~~k~~~L~A~s---~-~dr~~Wi~aL~~a~~~~~~~~~~~ 233 (792)
+|.. ...+...+.++|. ...++.. ++..++.+.+.+++.+++.+. . +++..|+++++.+..+.+......
T Consensus 147 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (799)
T KOG1737|consen 147 YLVELSKKLQRQGWLHALELAPLIAVEQT-SEYENENKSVMTKRIPLSIAVISVAQETREINVDVLRLLSSLPNLTGQLL 225 (799)
T ss_pred hhhhhhHHHhhcchhhhhhhccchhhhcc-ccccccccccccccccchhhhhcccccchhhhhhhhhhccccccchhhhh
Confidence 2311 3344567778887 5566666 778888888888888888775 3 789999999999999888743221
Q ss_pred --cCC-----CC------CcchhhhHHHHHHHHHHhHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 003839 234 --LMA-----PM------DSIQVSTEKLRQLLSEEGVREEVIQESEQIMRNEFAPLQSQLLLLKQKQWLLIDTLRQLETE 300 (792)
Q Consensus 234 --~~~-----~~------~~~~~s~~~lr~~l~~eg~~~~li~~~e~i~~~e~s~l~~~L~~lk~~~~~lld~L~~Le~~ 300 (792)
... .. ..+...++++.+++..++.+...+++||+++++++...+.++.++.+....+.+.|++|+.+
T Consensus 226 ~r~l~~~~~~~~~~s~s~~k~~~~~e~~~~k~~~s~~s~~a~~~~e~~~~s~~~~~s~~s~~~~~q~~~l~~~l~~le~q 305 (799)
T KOG1737|consen 226 LRELNALLEDKKEQSSSKSKLQERTERIALKVLTSLASVFAECDDEAELLSQSRIESDASHSESEQRIRLQEALSALENQ 305 (799)
T ss_pred hhhhccccccccccccchhhhHHHHHHHHHHHhhhhHHHHhHHHHHHHHHHHhHhhhhhhcchhhhhhhhhhHHHHHHhh
Confidence 111 11 11334478888888999999999999999999999999999999999999999999999999
Q ss_pred hhccccceecchhhhhhhccccchhhccCCCCCCCCCCCCCcccCCCCCCCcccccccccccccccc--ccccc------
Q 003839 301 KVDLENTVVDESQRQLIDQDASSTLRQDKFSEGTTESDDDNERVDGVEDETDEDENTFFDTRDFLSS--SSLRS------ 372 (792)
Q Consensus 301 ~~~le~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~de~~f~d~~~~~~~--~~~~s------ 372 (792)
+.+|+..+......+.... .+ ..+. . .. ..........+++++|||+.+..+. ....+
T Consensus 306 ~~~le~a~~~~~~~~~~~~-~~----------~~~~-~-~~-~~~~~~~~~~~e~~e~~da~s~~s~~~~~~~s~~~~e~ 371 (799)
T KOG1737|consen 306 NTDLEVALRRAHAAQAALD-LS----------KVTR-L-SL-LHEEESFSESDELTEQFDAESSLSDAQESLDSNSESEN 371 (799)
T ss_pred hhhHHHHHhHhhhhhhccC-cc----------cccc-c-cc-cccccccccccccccccccccccchhhhccCCcccccc
Confidence 9998776532111110000 00 0011 0 00 0012334445566788888764431 00001
Q ss_pred CCCCCCCCCCC-C-chhhhhhcccccccc----cccccccCCCccccccccCCCcccccCCchhHHHhhhccCCCCCCcc
Q 003839 373 NGSDFRSSSFS-S-DEESLQIVESENDID----ASIRFVGTNYPYIKRRKKLPDPVEKEKGVSLWAMIKDNIGKDLTKIC 446 (792)
Q Consensus 373 ~~~~~~~~~~~-~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~R~~lP~~~~~~~~~~lwsilK~~iGkDLtkIs 446 (792)
.+.....+... . ........ +.|... ..........+..+||++||+|..++.+++||+|||++||||||+|+
T Consensus 372 ~~s~~~~s~~s~~~~~~~~~~~-~~d~~~~~~~~~~~~~~~~~~~~~rr~~lp~~~~~~~~islw~~~k~~iGkDlskv~ 450 (799)
T KOG1737|consen 372 EGSEDEESYTSDISDNGSSDAL-SADGDKSSQALNEKVPSGSGAEVARRTNLPAPSKPSSSISLWSILRNNIGKDLSKVS 450 (799)
T ss_pred cccccccccccccccCCCcccc-ccccccccccccccccccccccccccccCCCCcCcCCCccHHHHHhhcccccccccc
Confidence 01111111000 0 00000000 000000 00000000134579999999998889999999999999999999999
Q ss_pred cccccccccChhHhhhhcccchHHHHHHHhcCCCCCHHHHHHHHHHHHHhhcccccCCCCCCCCCCCCCeeEEEecCCCE
Q 003839 447 LPVYFNEPLSSLQKCFEELEYSYLIDRAYEWGKRGNTLMRILNVAAFAVSGYASTEGRICKPFNPLLGETYEADYPDKGL 526 (792)
Q Consensus 447 LPv~~~EP~S~LQrl~e~~ey~~lLd~Aa~~~~~~d~~eRm~~V~aF~vS~~~~~~~r~kKPfNPiLGETfe~~~~d~g~ 526 (792)
|||.||||+|+|||++|+|||++|||+|+++ +||++||+||+||++|+|+.+..|.+|||||||||||||+++|+|+
T Consensus 451 ~PV~~nEP~S~LQr~~EdlEYs~LLd~A~~~---~d~~~R~~~vaafavS~Ya~t~~r~~KPFNPlLgETyE~~r~dkg~ 527 (799)
T KOG1737|consen 451 MPVEFNEPLSLLQRVAEDLEYSELLDKAANY---EDPLERMVYVAAFAVSSYSSTSRRTAKPFNPLLGETYEMDRPDKGL 527 (799)
T ss_pred cceecCCcchHHHHhhhhccchhhhHHHHhc---CCcHHHHHHHHHHHhhhcchhcccccCCCCcccccceEeeccCCce
Confidence 9999999999999999999999999999997 7899999999999999999899999999999999999999999999
Q ss_pred EEEEEe-------------CCeeEEEEEeeeeEEEEeeEEEEEeceEEEEEec-CCcEEEEeecceeeeeeccceeeEee
Q 003839 527 QFFSEK-------------GTGWKFWGDSNLKSKFWGRSIQLDPVGVLTLEFD-DGEVFQWSKVTSSIYNLILGKLYCDH 592 (792)
Q Consensus 527 rf~aEQ-------------~~g~~~~g~~~~kskF~G~Si~v~~~G~~~l~f~-~gE~Y~~~~p~~~i~nii~G~~~ie~ 592 (792)
|||+|| +.+|.|||++.+++||||+||+|.|+|.++|+|+ +|++|+|.+|+++|||||+|++|||+
T Consensus 528 rf~sEqVSHhPPi~A~h~es~~w~~~~ds~~~sKF~Gksi~v~P~G~l~l~~~~~G~~~~w~kvtt~v~nii~Gk~~~D~ 607 (799)
T KOG1737|consen 528 RFFSEQVSHHPPISACHAESNNWTFWGDSKVKSKFWGKSIEVPPLGILHVTLKNIGEHYSWAKVTTTVHNIILGKLWVDH 607 (799)
T ss_pred eeeeeeeccCCCcccccccCCCceeeccccccccccccceeecCCceEEEEEcCCCccccccCccceecceeeccccccc
Confidence 999999 7899999999999999999999999999999998 59999999999999999999999999
Q ss_pred cceEEEEeC-Cc-ceEEEEEeecCccCCCCcEEEEEEEcCCCcEEEEEEeEecceEEEEecccCCCCcccccCCccEEEE
Q 003839 593 YGTMRIEGN-RE-YSCKLKFKEQSIIDRNPHQVHGIVQDRNGKTVATLFGKWDESIHYVIGECSGKGKELESLSEACLLW 670 (792)
Q Consensus 593 ~G~~~I~~~-tg-~~a~i~F~~k~~fg~~~~~V~G~V~d~~g~~~~~i~G~Wd~~l~~~~~~~~~~~~~~~~~~~~~~lW 670 (792)
+|.|.|+++ ++ .+|.|+|++.+||+++.|+|.|.|++.+|++++++.|+|++.|++..++..+ ...+.....++|
T Consensus 608 ~ge~~i~n~~~~~~~c~L~F~~~~~~~~~~~ev~g~V~~~s~~~~~~l~GkW~e~~~~~~~~~~~---~~~~~~~~~~iW 684 (799)
T KOG1737|consen 608 YGEMEITNHTTGSDKCKLKFVKAGYFSRNAREVEGSVRNKSGKKVEVLTGKWDESLYYFKVDKVG---LPEPETSEKLIW 684 (799)
T ss_pred cccEEEecCCCCcceeEEEEeeecccCCCcceeEEEEeCCCCceeEEEeeeehhhhhhccccccc---cccCCccceeee
Confidence 999999995 45 5699999999999999999999999999999999999999999997766533 334456789999
Q ss_pred eeCCCCCCCCccCcccceeeccCCCccccCCCCCCCCcchhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHhcc---CCCc
Q 003839 671 KRSKPPKYPTRYNFTRFAITLNEVTPGLKEKLPPTDSRLRPDQRCLENGEYEMANSEKLRLEQRQRQARKMQE---NGWK 747 (792)
Q Consensus 671 ~~~~~p~~~~~y~ft~fai~lNe~~p~~~~~l~pTDSR~R~D~raLe~Gd~d~A~~eK~rLEe~QR~~Rk~re---~~w~ 747 (792)
++++.|.+ .+|+||.||++||+++|.+.+.+||||||+|||||+||+|+|++|+.||.||||+||++|+.|+ ..|+
T Consensus 685 k~~~~Pkn-~~y~ft~fai~LNel~p~l~~~lpPTDSRlRPDqr~lE~G~~~~a~~EK~rlEe~QR~~r~~re~~~~~~~ 763 (799)
T KOG1737|consen 685 KANDLPKN-NKYNFTGFAIELNELTPHLKKLLPPTDSRLRPDQRALENGEYDEANAEKLRLEEKQRARRRKREENGEEYE 763 (799)
T ss_pred ecCCCCCC-cccccchhheecccCCchhhccCCCCCcccCcchhhhhccChhhhhhhhHhHHHHHHHHHHHHHhhccccc
Confidence 99999988 8999999999999999999999999999999999999999999999999999999999988764 3699
Q ss_pred cceeEEcCCCC-ceEEcCChhhhccCCCCCCCCCCC
Q 003839 748 PRWFAKDRATG-TYRYIGGYWEARETGDWNLCPDIF 782 (792)
Q Consensus 748 Pk~F~k~~~~~-~w~Y~g~YW~~r~~~~w~~~pdif 782 (792)
||||.++++.. .|+|+|+||++|++.+|.+|+|||
T Consensus 764 prwF~~~~~~~~~~~~ng~Ywe~r~~~d~~~~~~if 799 (799)
T KOG1737|consen 764 PRWFEKVKDPSTYWVYNGGYWEAREKQDWKDCPDIF 799 (799)
T ss_pred cccccccCCCcceEEecCchheeecccCccccccCC
Confidence 99999997655 799999999999999999999998
No 2
>KOG2209 consensus Oxysterol-binding protein [Signal transduction mechanisms]
Probab=100.00 E-value=2e-96 Score=758.84 Aligned_cols=366 Identities=42% Similarity=0.767 Sum_probs=338.2
Q ss_pred ccccccccCCCcccccCCchhHHHhhhccCCCCCCcccccccccccChhHhhhhcccchHHHHHHHhcCCCCCHHHHHHH
Q 003839 410 PYIKRRKKLPDPVEKEKGVSLWAMIKDNIGKDLTKICLPVYFNEPLSSLQKCFEELEYSYLIDRAYEWGKRGNTLMRILN 489 (792)
Q Consensus 410 ~~~~~R~~lP~~~~~~~~~~lwsilK~~iGkDLtkIsLPv~~~EP~S~LQrl~e~~ey~~lLd~Aa~~~~~~d~~eRm~~ 489 (792)
...+.||+||+|+-....++||+|||+||||||+||+|||+||||+||||||+|+|+|.+||.+|+.+ .||+|||.|
T Consensus 24 ~~hk~RT~LPa~m~sr~d~SIW~Ilr~ciGkelSkiTmPV~~NEPLSFLQRltEyme~~yLi~kAs~~---~~p~eRmqy 100 (445)
T KOG2209|consen 24 GIHKHRTSLPAPMFSRNDFSIWSILRKCIGKELSKITMPVIFNEPLSFLQRLTEYMEHTYLIHKASSQ---SDPVERMQY 100 (445)
T ss_pred hhhhhcccCCccccccccccHHHHHHhhhchhhhheeeeeeeCCcHHHHHHHHHHHHHHHHHHHHhhC---CChHHHHHH
Confidence 34579999999999999999999999999999999999999999999999999999999999999985 899999999
Q ss_pred HHHHHHhhcccccCCCCCCCCCCCCCeeEEEecCCCEEEEEEe---------------CCeeEEEEEeeeeEEEEeeEEE
Q 003839 490 VAAFAVSGYASTEGRICKPFNPLLGETYEADYPDKGLQFFSEK---------------GTGWKFWGDSNLKSKFWGRSIQ 554 (792)
Q Consensus 490 V~aF~vS~~~~~~~r~kKPfNPiLGETfe~~~~d~g~rf~aEQ---------------~~g~~~~g~~~~kskF~G~Si~ 554 (792)
|+|||||+.++...|..|||||||||||++.+.|.|+||+||| ++.|.|.|.+.++.||||+||+
T Consensus 101 VAAFAvsavas~weR~gKPFNPLl~et~el~r~dlg~R~i~EQVSHHPPiSAfhaEgl~~dF~fhGsi~PklkFWgksve 180 (445)
T KOG2209|consen 101 VAAFAVSAVASQWERTGKPFNPLLGETYELEREDLGFRFISEQVSHHPPISAFHAEGLNNDFIFHGSIYPKLKFWGKSVE 180 (445)
T ss_pred HHHHHHHHHHHhHHHhcCCCcchhhhhhhheecccceEEeehhhccCCChhHhhhcccCcceEEeeeecccceeccceee
Confidence 9999999999999999999999999999999999999999999 6789999999999999999999
Q ss_pred EEeceEEEEEec-CCcEEEEeecceeeeeeccceeeEeecceEEEEe-CCcceEEEEEeecCccCCCCcEEEEEEEcCCC
Q 003839 555 LDPVGVLTLEFD-DGEVFQWSKVTSSIYNLILGKLYCDHYGTMRIEG-NREYSCKLKFKEQSIIDRNPHQVHGIVQDRNG 632 (792)
Q Consensus 555 v~~~G~~~l~f~-~gE~Y~~~~p~~~i~nii~G~~~ie~~G~~~I~~-~tg~~a~i~F~~k~~fg~~~~~V~G~V~d~~g 632 (792)
+.|.|.++|+|. +||.|+|+.|+++|||||+|++|||++|+|.|.+ .||+.|++.|+++|+||++.|+|+|.|+|++.
T Consensus 181 a~Pkgtitle~~k~nEaYtWtnp~CcvhNiIvGklwieqyg~~eI~nh~Tg~~~vl~Fk~~G~~gk~lHkVEG~i~d~~k 260 (445)
T KOG2209|consen 181 AEPKGTITLELLKHNEAYTWTNPTCCVHNIIVGKLWIEQYGNVEIINHKTGHKCVLNFKPCGLFGKELHKVEGHIQDKSK 260 (445)
T ss_pred cCCCceEEEEecccCcceeccCCcceeeeehhhhhhHhhcCcEEEEecCccceeEEecccccccccchhheeehhhcccc
Confidence 999999999996 8999999999999999999999999999999999 58999999999999999999999999999999
Q ss_pred cEEEEEEeEecceEEEEecccC-----------C-----CC------cc---------cccCCccEEEEeeCCCCCCC-C
Q 003839 633 KTVATLFGKWDESIHYVIGECS-----------G-----KG------KE---------LESLSEACLLWKRSKPPKYP-T 680 (792)
Q Consensus 633 ~~~~~i~G~Wd~~l~~~~~~~~-----------~-----~~------~~---------~~~~~~~~~lW~~~~~p~~~-~ 680 (792)
+++|.|.|+|.+.|+.++.... . +. .+ ....++.++||.+++.|++. .
T Consensus 261 ~kl~~lYGkWTe~l~~cd~esf~~~~Kq~~r~~~~r~~s~~~~~see~dd~P~~ds~~v~~iPgSk~LW~~n~rP~n~~~ 340 (445)
T KOG2209|consen 261 KKLCALYGKWTECLYSCDPESFDAFKKQDKRNTEERKNSKQMSTSEELDDMPVPDSESVFIIPGSKLLWRINPRPPNSAQ 340 (445)
T ss_pred ccchhhhccHHHHHhcCCHHHHHHHHHhhhhcchhhhhhccCCchhhccCCCCCCcceeEecCCCeEEEEecCCCCCHHH
Confidence 9999999999999987543210 0 00 00 01135678999999988765 6
Q ss_pred ccCcccceeeccCCCccccCCCCCCCCcchhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHhc---cCCCccceeEEcCCC
Q 003839 681 RYNFTRFAITLNEVTPGLKEKLPPTDSRLRPDQRCLENGEYEMANSEKLRLEQRQRQARKMQ---ENGWKPRWFAKDRAT 757 (792)
Q Consensus 681 ~y~ft~fai~lNe~~p~~~~~l~pTDSR~R~D~raLe~Gd~d~A~~eK~rLEe~QR~~Rk~r---e~~w~Pk~F~k~~~~ 757 (792)
+|+||.|++.|||+.+++...++|||||+|||+||||+|++|.|.++|+||||+||++||.| +..|+|+||++..++
T Consensus 341 ~y~FT~FalsLNem~~~M~~tl~pTD~RlRpDi~~mE~G~~D~AseeK~rlEEkQRe~Rk~rs~~~~dw~~rWF~~~~np 420 (445)
T KOG2209|consen 341 MYNFTSFALSLNEMDKGMESTLPPTDCRLRPDIRAMENGNIDQASEEKKRLEEKQREARKNRSKSEEDWKTRWFHQGPNP 420 (445)
T ss_pred hhchhhheeehhhhccCcccccCCcccccCchhhhhhcCCcchhHHHHHHHHHHHHHHHhhcccccccCcchhcccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999988 557999999998653
Q ss_pred ----CceEEcCChhhhccCCCCCCCCCCC
Q 003839 758 ----GTYRYIGGYWEARETGDWNLCPDIF 782 (792)
Q Consensus 758 ----~~w~Y~g~YW~~r~~~~w~~~pdif 782 (792)
..|.|.||||+ +++++|||||
T Consensus 421 ~t~~~dWlYsGgYwd----R~ysn~~~i~ 445 (445)
T KOG2209|consen 421 YTGAQDWLYSGGYWD----RNYSNCPDIY 445 (445)
T ss_pred CCCcccceeecCccc----cccccCcccC
Confidence 46999999998 8999999998
No 3
>PF01237 Oxysterol_BP: Oxysterol-binding protein ; InterPro: IPR000648 A number of eukaryotic proteins that seem to be involved with sterol synthesis and/or its regulation have been found [] to be evolutionary related. These include mammalian oxysterol-binding protein (OSBP), a protein of about 800 amino-acid residues that binds a variety of oxysterols (oxygenated derivatives of cholesterol); yeast OSH1, a protein of 859 residues that also plays a role in ergosterol synthesis; yeast proteins HES1 and KES1, highly related proteins of 434 residues that seem to play a role in ergosterol synthesis; and yeast hypothetical proteins YHR001w, YHR073w and YKR003w.; PDB: 3SPW_A 1ZI7_C 1ZHW_A 1ZHX_A 1ZHY_A 1ZHZ_A 1ZHT_A.
Probab=100.00 E-value=1.3e-85 Score=725.95 Aligned_cols=330 Identities=48% Similarity=0.875 Sum_probs=253.0
Q ss_pred hhHHHhhhccCCCCCCcccccccccccChhHhhhhcccchHHHHHHHhcCCCCCHHHHHHHHHHHHHhhcccccCCCCCC
Q 003839 429 SLWAMIKDNIGKDLTKICLPVYFNEPLSSLQKCFEELEYSYLIDRAYEWGKRGNTLMRILNVAAFAVSGYASTEGRICKP 508 (792)
Q Consensus 429 ~lwsilK~~iGkDLtkIsLPv~~~EP~S~LQrl~e~~ey~~lLd~Aa~~~~~~d~~eRm~~V~aF~vS~~~~~~~r~kKP 508 (792)
|||++||+++|||||+|+|||+||||+|+|||++++|+|++||++|+.+ +||++||++|++|+||+|+.+..|++||
T Consensus 1 s~w~~lK~~~G~dLs~islPv~~~eP~S~Lqr~~~~~~y~~lL~~Aa~~---~d~~eR~~~V~~f~~S~~~~~~~~~~KP 77 (354)
T PF01237_consen 1 SIWSFLKQKIGKDLSRISLPVFFNEPRSFLQRLAEDFEYPDLLDKAAEE---DDPLERMLYVAAFALSSYSSTPGRTKKP 77 (354)
T ss_dssp HHHHHHHHT--S-GGGS---GGGEEEEEGGGGGGGGSSSHHHHHGGGGS----HHHHHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred CHHHHhhhcCCCChhcCccCceecCCCcHHHhhhhhhhChHHHhccCCC---CCHHHHHHHHHHHHHhhhhhhcCCCCcC
Confidence 6999999999999999999999999999999999999999999999874 8999999999999999999987788999
Q ss_pred CCCCCCCeeEEEecCCCEEEEEEe-------------CCeeEEEEEeeeeEEEEeeEEEEEeceEEEEEecC-CcEEEEe
Q 003839 509 FNPLLGETYEADYPDKGLQFFSEK-------------GTGWKFWGDSNLKSKFWGRSIQLDPVGVLTLEFDD-GEVFQWS 574 (792)
Q Consensus 509 fNPiLGETfe~~~~d~g~rf~aEQ-------------~~g~~~~g~~~~kskF~G~Si~v~~~G~~~l~f~~-gE~Y~~~ 574 (792)
|||||||||||.++ +|++|+||| ++||+++|++.+++||+|+||++.+.|.++|+|.+ ||+|+|+
T Consensus 78 fNPiLGETfe~~~~-~~~~~~aEQVSHHPPisa~~~~~~~~~~~g~~~~~~kf~g~sv~~~~~G~~~i~f~~~~e~Y~~~ 156 (354)
T PF01237_consen 78 FNPILGETFELVRP-DGTRFIAEQVSHHPPISAFHAEGRGWKFYGHIEPKSKFWGNSVEVNPIGKVTITFPDGGETYTWT 156 (354)
T ss_dssp E---TT-EE--TT--T-EEEEEEEEETTTTEEEEEEEETTEEEEEEEEEEEEE-TT-EEEEEEEEEEEEET--TEEEEEE
T ss_pred cCCCCcceeeeccC-ceEEEEEecccCCCCceEEEEEcCCEEEEEEEeeeEEEeceEEEEEECCcEEEEEcCCceEEEEe
Confidence 99999999999988 799999999 89999999999999999999999999999999984 7999999
Q ss_pred ecceeeeeeccceeeEeecceEEEEe-CCcceEEEEEeecCccCCCCcEEEEEEEcCCCcEEEEEEeEecceEEEEeccc
Q 003839 575 KVTSSIYNLILGKLYCDHYGTMRIEG-NREYSCKLKFKEQSIIDRNPHQVHGIVQDRNGKTVATLFGKWDESIHYVIGEC 653 (792)
Q Consensus 575 ~p~~~i~nii~G~~~ie~~G~~~I~~-~tg~~a~i~F~~k~~fg~~~~~V~G~V~d~~g~~~~~i~G~Wd~~l~~~~~~~ 653 (792)
+|+++|+||++|++|+|++|+|+|+| ++|++|+|+|+++|+|+++.|.|+|.|++.+|+++++|.|+||+.|++...+.
T Consensus 157 ~p~~~i~gi~~G~~~~e~~G~~~i~~~~tg~~~~i~f~~~~~f~~~~~~v~G~I~~~~~~~~~~i~G~W~~~i~~~~~~~ 236 (354)
T PF01237_consen 157 KPTTYIRGIIFGKRYIEHVGKMVITCHKTGLKAEIEFKPKGWFSGKSNEVEGKIYDSKGKPIYKISGKWDEEIYIKDVKN 236 (354)
T ss_dssp --SEEEESTTTTS-EEEEESEEEEEET-TS-EEEEEEETSSSTSSSTTEEEEEEESSGGG-SEEEEEETTSEEEEEETT-
T ss_pred cCcEEEeeeecccEEEEecCCEEEEcCCcceEEEEEEecCCcccccceeeEEEEEEccCceeEEeeeeeCCeEEEEeccc
Confidence 99999999999999999999999999 58999999999999999999999999999889999999999999999987652
Q ss_pred CCCCcccccCCccEEEEeeCCCCCCC-CccCcccceeeccCCCccccCCCCCCCCcchhhhhhhhcCCHHHHHHHHHHHH
Q 003839 654 SGKGKELESLSEACLLWKRSKPPKYP-TRYNFTRFAITLNEVTPGLKEKLPPTDSRLRPDQRCLENGEYEMANSEKLRLE 732 (792)
Q Consensus 654 ~~~~~~~~~~~~~~~lW~~~~~p~~~-~~y~ft~fai~lNe~~p~~~~~l~pTDSR~R~D~raLe~Gd~d~A~~eK~rLE 732 (792)
.. ..++..++|++++.+... .+|+||.||++||++++.+.+.++|||||+|||++||++||+++|+++|++||
T Consensus 237 ~~------~~~~~~~lw~~~~~~~~~~~~~~ft~fa~~LNe~~~~~~~~~~ptDSr~R~d~~al~~gd~~~A~~eK~~lE 310 (354)
T PF01237_consen 237 DS------DTGESKLLWDANPLPPNPKKYYGFTQFAIPLNELTPELEEKLPPTDSRWRPDQRALENGDIDKAQEEKKRLE 310 (354)
T ss_dssp ---------GGGEEEEEETTTS-SS--B----------G-------G-GS-TTBHHHHHHHHHHHHT-HHHHHHHHHHHH
T ss_pred cc------cCCCceEEEECCCCcccccceecccccccccccccccccccCCchhccchHHHHHHHcCCHHHHHHHHHHHH
Confidence 10 124578999999987654 57999999999999999877899999999999999999999999999999999
Q ss_pred HHHHHHHHhcc---CCCccceeEEcCC----CCceEEcCChhh
Q 003839 733 QRQRQARKMQE---NGWKPRWFAKDRA----TGTYRYIGGYWE 768 (792)
Q Consensus 733 e~QR~~Rk~re---~~w~Pk~F~k~~~----~~~w~Y~g~YW~ 768 (792)
|+||++||+|+ ..|+||||+++.+ ...|+|+|+||+
T Consensus 311 e~QR~~rk~R~~~~~~w~Pr~F~~~~d~~~~~~~w~~~g~YW~ 353 (354)
T PF01237_consen 311 EKQRADRKERKEKGEEWKPRWFEKVEDPSTEEEEWVYKGGYWE 353 (354)
T ss_dssp HHHHHHHHHHHHCT--GGGSSEEEEE-SSS--T----------
T ss_pred HHHHHHHHHHHHcCCCccCCeEEECCCCCCccccccccccccC
Confidence 99999998764 5799999998854 467999999997
No 4
>KOG2210 consensus Oxysterol-binding protein [Signal transduction mechanisms]
Probab=100.00 E-value=1e-57 Score=496.51 Aligned_cols=315 Identities=25% Similarity=0.358 Sum_probs=272.3
Q ss_pred CchhHHHhhh-ccCCCCCCcccccccccccChhHhhhhcccchHHHHHHHhcCCCCCHHHHHHHHHHHHHhhcccccCCC
Q 003839 427 GVSLWAMIKD-NIGKDLTKICLPVYFNEPLSSLQKCFEELEYSYLIDRAYEWGKRGNTLMRILNVAAFAVSGYASTEGRI 505 (792)
Q Consensus 427 ~~~lwsilK~-~iGkDLtkIsLPv~~~EP~S~LQrl~e~~ey~~lLd~Aa~~~~~~d~~eRm~~V~aF~vS~~~~~~~r~ 505 (792)
...||.++++ .+|||||+|+||+|++||+|+||++++.+.+++||-.|.. .+||++||+.|++|++|+|+..+...
T Consensus 34 ~s~i~~L~sq~rpg~DLs~v~LPtfile~rs~Le~~~~~~~~~dll~~~~~---~~~p~~R~~~VvkwylS~~~~~~~~~ 110 (392)
T KOG2210|consen 34 KSIILDLLSQLRPGMDLSRVVLPTFILEPRSLLEKYTDFSYHPDLLLEASS---EADPLERMLAVVKWYLSGFHAGPKGR 110 (392)
T ss_pred cceeecHhhhccCCCCcccccchhhhhhhHHHHHHhhhhhhccchhccccc---CCCHHHHhhhheeeeehhcccccccc
Confidence 3456777777 8999999999999999999999999999999999876665 58999999999999999999998888
Q ss_pred CCCCCCCCCCeeEEEec-----C-CCEEEEEEe---------------CCeeEEEEEeeeeEEEEeeEEEEEeceEEEEE
Q 003839 506 CKPFNPLLGETYEADYP-----D-KGLQFFSEK---------------GTGWKFWGDSNLKSKFWGRSIQLDPVGVLTLE 564 (792)
Q Consensus 506 kKPfNPiLGETfe~~~~-----d-~g~rf~aEQ---------------~~g~~~~g~~~~kskF~G~Si~v~~~G~~~l~ 564 (792)
+|||||||||||.|.|. + +.+.|+||| .+|++|.|++++|+||.|+||.|.+.|..+|+
T Consensus 111 ~~PyNPILGEtF~~~w~~~~~p~~~~~~~iAEQVSHHPPvSAf~~~~~~~~i~v~g~v~~kSkF~G~s~~V~~~G~~~l~ 190 (392)
T KOG2210|consen 111 KKPYNPILGETFTCHWKYPPHPSKGDTVFVAEQVSHHPPVSAFYVTCPKKGIQVDGHVWAKSKFLGNSIAVAMIGKGVLK 190 (392)
T ss_pred cCCCCccchhhcccccccCCCCCCceEEEEeecccCCCCcceeeEEccccCeEEEEEEeecccccccceeEEEcCCcEEE
Confidence 88999999999999982 2 358999999 78999999999999999999999999999999
Q ss_pred ec-CCcEEEEeecceeeeeeccceeeEeecceEEEEe-CCcceEEEEEeecCccCCCCcEEEEEEEcCC-CcEEEEEEeE
Q 003839 565 FD-DGEVFQWSKVTSSIYNLILGKLYCDHYGTMRIEG-NREYSCKLKFKEQSIIDRNPHQVHGIVQDRN-GKTVATLFGK 641 (792)
Q Consensus 565 f~-~gE~Y~~~~p~~~i~nii~G~~~ie~~G~~~I~~-~tg~~a~i~F~~k~~fg~~~~~V~G~V~d~~-g~~~~~i~G~ 641 (792)
|. ++|+|.+++|.++++|+++|.+|+|++|+++|.| ++++.+.+.|+.++|+|+..+.+.|.|+... .+..+.|+|+
T Consensus 191 ll~~~E~Y~~t~P~~~~rg~~~~~p~velggkv~I~c~kt~~~a~~~~~~~~f~g~~~s~~~~~ik~~~~~~~~~~i~G~ 270 (392)
T KOG2210|consen 191 LLDHDETYLITFPNAYARGILLGAPWVELGGKVVIECPKTGLSAILESILKPFLGGKNSFNARSIKGPIDKKDFCSISGE 270 (392)
T ss_pred EEecCcceeeccCCceeeeeeeccceEecCceEEEEcCCcceeeeEeeccCcccccccccceEEEEccccccccccccee
Confidence 86 7999999999999999999999999999999999 6899999999999999999999999999643 4567889999
Q ss_pred ecceEEEEecccCCCCcccccCCccEEEEeeCCCCCCCCccCcccceeeccCCCccccCCCCCCCCcc--hhhhhhhhcC
Q 003839 642 WDESIHYVIGECSGKGKELESLSEACLLWKRSKPPKYPTRYNFTRFAITLNEVTPGLKEKLPPTDSRL--RPDQRCLENG 719 (792)
Q Consensus 642 Wd~~l~~~~~~~~~~~~~~~~~~~~~~lW~~~~~p~~~~~y~ft~fai~lNe~~p~~~~~l~pTDSR~--R~D~raLe~G 719 (792)
||+.|++++.++. +...+-+....|. ..-.+.| .+.|.|.+||+ +++++||..|
T Consensus 271 W~~~~~~k~~~~~----------~~~~~~d~~~~~~------------~~~~v~p--LeEQ~e~ESrrlWk~Vt~ai~~~ 326 (392)
T KOG2210|consen 271 WDGVMYAKYAKSG----------ESRNFVDCKKLPV------------TKPKVRP--LEEQGEYESRRLWKEVTEAILAG 326 (392)
T ss_pred ecccEEEEEcCCC----------ceeecccccccCc------------CCCCcCC--hHHcCcHHHHHHHHHHHHHHHhc
Confidence 9999999876531 1122222222221 1111222 46788999998 6799999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhcc---CCCccceeEEcCCCCceEEcCChhh
Q 003839 720 EYEMANSEKLRLEQRQRQARKMQE---NGWKPRWFAKDRATGTYRYIGGYWE 768 (792)
Q Consensus 720 d~d~A~~eK~rLEe~QR~~Rk~re---~~w~Pk~F~k~~~~~~w~Y~g~YW~ 768 (792)
|++.|+++|..|||+||++||.|+ ..|+||||...++++.|.|...-|.
T Consensus 327 d~~~Ate~K~~iEe~QR~~ak~ree~g~~W~pk~F~~~~~~~~~~~~~~~~~ 378 (392)
T KOG2210|consen 327 DIEQATEEKFELEEKQRELAKKREESGEEWKPKLFKVDEDGGDWDYRNYLPK 378 (392)
T ss_pred cHHHHhHHHhHHHHHHHHHHHHHHHhCCcceecceeEcCCCCCccccccccC
Confidence 999999999999999999988775 4699999999988889999977654
No 5
>cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. The GPBP protein is a kinase that phosphorylates an N-terminal region of the alpha 3 chain of type IV collagen , which is commonly known as the goodpasture antigen. It has has an N-terminal PH domain and a C-terminal START domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cyt
Probab=99.89 E-value=9.3e-23 Score=183.30 Aligned_cols=89 Identities=38% Similarity=0.694 Sum_probs=79.2
Q ss_pred eEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCcce
Q 003839 95 ISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFG 174 (792)
Q Consensus 95 ~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p~G 174 (792)
++|||.||+|++|+||+|||||++|.|+||+++.+. ...|+|
T Consensus 1 ~~G~L~K~~~~~k~Wk~RwFvL~~g~L~Yyk~~~~~--------------------------------------~~~~~G 42 (91)
T cd01247 1 TNGVLSKWTNYINGWQDRYFVLKEGNLSYYKSEAEK--------------------------------------SHGCRG 42 (91)
T ss_pred CceEEEEeccccCCCceEEEEEECCEEEEEecCccC--------------------------------------cCCCcE
Confidence 479999999999999999999999999999986541 113789
Q ss_pred EEEcCceEEEecCCCCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHH
Q 003839 175 EVHLKVSSIRDSKSDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQA 221 (792)
Q Consensus 175 ~I~L~~ssi~~~~~d~~~F~I~t~~-k~~~L~A~s~~dr~~Wi~aL~~ 221 (792)
.|+|+.|.|.....+.++|.|.++. ++|+|+|+|++||+.||+||+.
T Consensus 43 ~I~L~~~~i~~~~~~~~~F~i~~~~~r~~~L~A~s~~e~~~Wi~al~~ 90 (91)
T cd01247 43 SIFLKKAIIAAHEFDENRFDISVNENVVWYLRAENSQSRLLWMDSVVR 90 (91)
T ss_pred EEECcccEEEcCCCCCCEEEEEeCCCeEEEEEeCCHHHHHHHHHHHhh
Confidence 9999999998877778999997766 9999999999999999999984
No 6
>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain. PARIS-1 pleckstrin homology (PH) domain. PARIS-1 contains a PH domain and a TBC-type GTPase catalytic domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.82 E-value=6.1e-20 Score=166.32 Aligned_cols=89 Identities=30% Similarity=0.522 Sum_probs=77.2
Q ss_pred eEEEEEeecC--CCCCceeeEEEEe--CCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCC
Q 003839 95 ISGVLYKWVN--YGKGWRPRWFVLQ--DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (792)
Q Consensus 95 ~~G~L~K~~n--~~kgWk~RwFVL~--~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (792)
++|||.|+++ .+|+||+|||||+ .++|+||+++.+ .
T Consensus 1 l~GyL~K~g~~~~~K~WkkRWFvL~~~~~~L~Yyk~~~d----------------------------------------~ 40 (95)
T cd01265 1 LCGYLHKIEGKGPLRGRRSRWFALDDRTCYLYYYKDSQD----------------------------------------A 40 (95)
T ss_pred CcccEEEecCCCCCcCceeEEEEEcCCCcEEEEECCCCc----------------------------------------c
Confidence 4799999976 6899999999996 468999997543 2
Q ss_pred CcceEEEcCceEEEecCCC-CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003839 171 KPFGEVHLKVSSIRDSKSD-DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (792)
Q Consensus 171 ~p~G~I~L~~ssi~~~~~d-~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~ 223 (792)
+|+|.|+|..+++..+..+ ++.|.|.|++|+|+|+|+|++||+.||+||+.++
T Consensus 41 ~p~G~I~L~~~~~~~~~~~~~~~F~i~t~~r~y~l~A~s~~e~~~Wi~al~~~~ 94 (95)
T cd01265 41 KPLGRVDLSGAAFTYDPREEKGRFEIHSNNEVIALKASSDKQMNYWLQALQSKR 94 (95)
T ss_pred cccceEECCccEEEcCCCCCCCEEEEEcCCcEEEEECCCHHHHHHHHHHHHhhc
Confidence 4889999999888766555 7899999999999999999999999999999874
No 7
>PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C.
Probab=99.82 E-value=2.9e-20 Score=173.40 Aligned_cols=110 Identities=51% Similarity=0.871 Sum_probs=62.1
Q ss_pred eEEEEEeecCC-CCCceeeEEEEe-CCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCc
Q 003839 95 ISGVLYKWVNY-GKGWRPRWFVLQ-DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (792)
Q Consensus 95 ~~G~L~K~~n~-~kgWk~RwFVL~-~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p 172 (792)
++|||+||+|+ ++|||+|||||+ ||+|+|||+..+ ..+++|+|+.+.+.+.+.++..+..+...
T Consensus 1 k~G~l~K~~~~~~kgWk~RwFiL~k~~~L~YyK~~~~---------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~----- 66 (112)
T PF15413_consen 1 KEGYLYKWGNKFGKGWKKRWFILRKDGVLSYYKIPRD---------KKDVRIIGEESSRVIRKGDWSISRRSSRI----- 66 (112)
T ss_dssp EEEEEEE--TTS-S--EEEEEEEE-TTEEEEESS----------------------TT-SB-SEEEE---GGGT------
T ss_pred CCceEEEecCCCCcCccccEEEEEeCCEEEEeecccc---------cccccccccchhceEeecccCcccccccc-----
Confidence 68999999998 999999999999 999999998433 34567777777666665555544322110
Q ss_pred ceEEEcCceEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 003839 173 FGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAV 222 (792)
Q Consensus 173 ~G~I~L~~ssi~~~~~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a 222 (792)
..++.. . .....+.+.|.|+|++|+|||+|++.+|+.+||+||++|
T Consensus 67 -~~~~~~-~--~~~~~~~~~~~i~T~~kt~~l~~~t~~d~~~Wi~aL~~~ 112 (112)
T PF15413_consen 67 -QGIKDK-N--PFGEIHLKVFSIFTPTKTFHLRCETREDRYDWIEALQEA 112 (112)
T ss_dssp -EEEES--T----SS-SSEEEEEE-SS-EEEEEESSHHHHHHHHHHHHH-
T ss_pred -cccccC-C--cccCcCCCCcEEECCCcEEEEEECCHHHHHHHHHHHHhC
Confidence 111111 0 112234577888999999999999999999999999986
No 8
>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain. Unc-104 pleckstrin homology (PH) domain. Unc-104 is a kinesin-like protein containing an N-terminal kinesin catalytic domain, followed by a forkhead associated domain with a C-terminal PH domain. These proteins are responsible for the transport of membrane vesicles along microtubules. The mechanism involves the binding of the PH domain to phosphatidiylinositol (4,5) P2-containing liposomes.
Probab=99.77 E-value=2.5e-18 Score=157.19 Aligned_cols=91 Identities=19% Similarity=0.335 Sum_probs=79.0
Q ss_pred cceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCc
Q 003839 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (792)
Q Consensus 93 ~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p 172 (792)
+.++|||.|++...+.|++|||||+++.|+||+++.+ ..|
T Consensus 2 v~k~G~L~Kkg~~~k~WkkRwfvL~~~~L~yyk~~~~----------------------------------------~~~ 41 (100)
T cd01233 2 VSKKGYLNFPEETNSGWTRRFVVVRRPYLHIYRSDKD----------------------------------------PVE 41 (100)
T ss_pred cceeEEEEeeCCCCCCcEEEEEEEECCEEEEEccCCC----------------------------------------ccE
Confidence 4689999999998999999999999999999998653 136
Q ss_pred ceEEEcCceEEEecCC------CCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003839 173 FGEVHLKVSSIRDSKS------DDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (792)
Q Consensus 173 ~G~I~L~~ssi~~~~~------d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~ 223 (792)
.|.|.|..+++....+ .++.|.|.+++|+|+|+|+|.+|+++||+||+...
T Consensus 42 ~~~I~L~~~~v~~~~~~~~~~~~~~~F~I~t~~rt~~~~A~s~~e~~~Wi~ai~~~~ 98 (100)
T cd01233 42 RGVINLSTARVEHSEDQAAMVKGPNTFAVCTKHRGYLFQALSDKEMIDWLYALNPLY 98 (100)
T ss_pred eeEEEecccEEEEccchhhhcCCCcEEEEECCCCEEEEEcCCHHHHHHHHHHhhhhh
Confidence 7999999887765543 25789999999999999999999999999998764
No 9
>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specifici
Probab=99.77 E-value=2.1e-18 Score=158.56 Aligned_cols=90 Identities=28% Similarity=0.445 Sum_probs=74.1
Q ss_pred eEEEEEeecCC-CCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCcc
Q 003839 95 ISGVLYKWVNY-GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (792)
Q Consensus 95 ~~G~L~K~~n~-~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p~ 173 (792)
++|||.|++.. .++||+|||||+++.|+||+++.+ ..|.
T Consensus 1 KeG~L~K~g~~~~k~wkkRwFvL~~~~L~Yyk~~~d----------------------------------------~~~~ 40 (103)
T cd01251 1 KEGFMEKTGPKHTEGFKKRWFTLDDRRLMYFKDPLD----------------------------------------AFAK 40 (103)
T ss_pred CceeEEecCCCCCCCceeEEEEEeCCEEEEECCCCC----------------------------------------cCcC
Confidence 48999999976 699999999999999999997553 1378
Q ss_pred eEEEcCce----EEEec-----CCC-CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003839 174 GEVHLKVS----SIRDS-----KSD-DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKD 224 (792)
Q Consensus 174 G~I~L~~s----si~~~-----~~d-~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~ 224 (792)
|+|.|..+ +|... ..+ ...|.|.|++|+|+|.|+|++||.+||+||+.|..
T Consensus 41 G~I~L~~~~~~~~v~~~~~~~~~~~~~~~F~i~t~~Rty~l~a~s~~e~~~Wi~ai~~v~~ 101 (103)
T cd01251 41 GEVFLGSQEDGYEVREGLPPGTQGNHWYGVTLVTPERKFLFACETEQDRREWIAAFQNVLS 101 (103)
T ss_pred cEEEeeccccceeEeccCCccccccccceEEEEeCCeEEEEECCCHHHHHHHHHHHHHHhc
Confidence 99999743 34321 111 23899999999999999999999999999999975
No 10
>cd01264 PH_melted Melted pleckstrin homology (PH) domain. Melted pleckstrin homology (PH) domain. The melted protein has a C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.75 E-value=7.1e-18 Score=153.86 Aligned_cols=89 Identities=25% Similarity=0.398 Sum_probs=74.6
Q ss_pred eEEEEEeecC---CCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCC
Q 003839 95 ISGVLYKWVN---YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (792)
Q Consensus 95 ~~G~L~K~~n---~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (792)
++|||.|.+. ++|.|++|||||+++.|+|||.+... .+
T Consensus 2 ~~G~l~k~~g~~r~~K~WkrRwF~L~~~~L~y~K~~~~~---------------------------------------~~ 42 (101)
T cd01264 2 IEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKSKD---------------------------------------DP 42 (101)
T ss_pred cceEEeecCccceeeecceeEEEEEeCCEEEEEeccCcc---------------------------------------CC
Confidence 6899999988 89999999999999999999975431 22
Q ss_pred cceEEEcCceEEEecCCC-------CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 003839 172 PFGEVHLKVSSIRDSKSD-------DKRFSIFTGTKRLHLRAETREDRFAWMEALQAV 222 (792)
Q Consensus 172 p~G~I~L~~ssi~~~~~d-------~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a 222 (792)
+.|+|+|..|.......+ ++.|.|.|++|+|+|+|+|++++++||++|+.|
T Consensus 43 ~~g~IdL~~~~sVk~~~~~~~~~~~~~~Fei~tp~rt~~l~A~se~e~e~WI~~i~~a 100 (101)
T cd01264 43 DDCSIDLSKIRSVKAVAKKRRDRSLPKAFEIFTADKTYILKAKDEKNAEEWLQCLNIA 100 (101)
T ss_pred CCceEEcccceEEeeccccccccccCcEEEEEcCCceEEEEeCCHHHHHHHHHHHHhh
Confidence 459999988764333221 368999999999999999999999999999976
No 11
>cd01238 PH_Tec Tec pleckstrin homology (PH) domain. Tec pleckstrin homology (PH) domain. Proteins in the Tec family of cytoplasmic protein tyrosine kinases that includes Bruton's tyrosine kinase (BTK), BMX, IL2-inducible T-cell kinase (Itk) and Tec. These proteins generally have an N-terminal PH domain, followed by a Tek homology (TH) domain, a SH3 domain, a SH2 domain and a kinase domain. Tec PH domains tether these proteins to membranes following the activation of PI3K and its subsequent phosphorylation of phosphoinositides. The importance of PH domain membrane anchoring is confirmed by the discovery of a mutation of a critical arginine residue in the BTK PH domain, which causes X-linked agammaglobulinemia (XLA) in humans and a related disorder is mice. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few dis
Probab=99.73 E-value=1.4e-17 Score=153.87 Aligned_cols=91 Identities=24% Similarity=0.300 Sum_probs=73.1
Q ss_pred ceEEEEEeecCCC-----CCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhccccccccccccc
Q 003839 94 GISGVLYKWVNYG-----KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (792)
Q Consensus 94 ~~~G~L~K~~n~~-----kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~ 168 (792)
+++|||+|++... ++||+|||||+++.|+||+++.+.
T Consensus 1 ~k~g~l~Kr~~~~~~~~~~nwKkRwFvL~~~~L~Yyk~~~~~-------------------------------------- 42 (106)
T cd01238 1 ILESILVKRSQQKKKTSPLNYKERLFVLTKSKLSYYEGDFEK-------------------------------------- 42 (106)
T ss_pred CcceeeeeeccCCCCCCCCCceeEEEEEcCCEEEEECCCccc--------------------------------------
Confidence 4789999996322 489999999999999999975431
Q ss_pred CCCcceEEEcCceEEEecC----------CCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 003839 169 NRKPFGEVHLKVSSIRDSK----------SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAV 222 (792)
Q Consensus 169 ~~~p~G~I~L~~ssi~~~~----------~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a 222 (792)
...|+|+|+|..+...+.. .+.+.|.|.+++++|+|.|+|.+||++||+||+.+
T Consensus 43 ~~~~kG~I~L~~~~~ve~~~~~~~~~~~~~~~~~F~i~t~~r~~yl~A~s~~er~~WI~ai~~~ 106 (106)
T cd01238 43 RGSKKGSIDLSKIKCVETVKPEKNPPIPERFKYPFQVVHDEGTLYVFAPTEELRKRWIKALKQV 106 (106)
T ss_pred ccCcceeEECCcceEEEEecCCcCcccccccCccEEEEeCCCeEEEEcCCHHHHHHHHHHHHhC
Confidence 1247899999987654321 13567999999999999999999999999999864
No 12
>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain. Set binding factor Pleckstrin Homology (PH) domain. Set binding factor is a myotubularin-related pseudo-phosphatase consisting of a Denn domain, a Gram domain, an inactive phosphatase domain, a SID motif and a C-terminal PH domain. Its PH domain is predicted to bind lipids based upon its ability to respond to phosphatidylinositol 3-kinase .
Probab=99.73 E-value=2.4e-17 Score=149.87 Aligned_cols=89 Identities=29% Similarity=0.475 Sum_probs=72.5
Q ss_pred eEEEEEeecCCCCCceeeEEEEe--CCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCc
Q 003839 95 ISGVLYKWVNYGKGWRPRWFVLQ--DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (792)
Q Consensus 95 ~~G~L~K~~n~~kgWk~RwFVL~--~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p 172 (792)
.+|||.|+++..+.||+|||||. ++.|+||+++.+ .+|
T Consensus 1 ~~G~L~K~g~~~k~WkkRwFvL~~~~~~L~Yy~~~~~----------------------------------------~~~ 40 (101)
T cd01235 1 CEGYLYKRGALLKGWKPRWFVLDPDKHQLRYYDDFED----------------------------------------TAE 40 (101)
T ss_pred CeEEEEEcCCCCCCccceEEEEECCCCEEEEecCCCC----------------------------------------Ccc
Confidence 37999999999999999999997 569999997543 247
Q ss_pred ceEEEcCceEEEec-C---------CCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003839 173 FGEVHLKVSSIRDS-K---------SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (792)
Q Consensus 173 ~G~I~L~~ssi~~~-~---------~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~ 223 (792)
+|.|+|..++.... . .....|.|.++.|+|+|+|+|.+|+++||+||++++
T Consensus 41 ~g~I~L~~~~~v~~~~~~~~~~~~~~~~~~f~i~t~~r~~~~~a~s~~e~~~Wi~ai~~~i 101 (101)
T cd01235 41 KGCIDLAEVKSVNLAQPGMGAPKHTSRKGFFDLKTSKRTYNFLAENINEAQRWKEKIQQCI 101 (101)
T ss_pred ceEEEcceeEEEeecCCCCCCCCCCCCceEEEEEeCCceEEEECCCHHHHHHHHHHHHhhC
Confidence 89999997653321 1 123447788999999999999999999999999874
No 13
>PF15409 PH_8: Pleckstrin homology domain
Probab=99.71 E-value=3.1e-17 Score=145.85 Aligned_cols=86 Identities=36% Similarity=0.621 Sum_probs=76.2
Q ss_pred EEEEee-cCCCCCceeeEEEE--eCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCcc
Q 003839 97 GVLYKW-VNYGKGWRPRWFVL--QDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (792)
Q Consensus 97 G~L~K~-~n~~kgWk~RwFVL--~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p~ 173 (792)
|||.|+ .+..+||++||||| ++|+|+||+++.+ .+.+
T Consensus 1 G~llKkrr~~lqG~~kRyFvL~~~~G~LsYy~~~~~----------------------------------------~~~r 40 (89)
T PF15409_consen 1 GWLLKKRRKPLQGWHKRYFVLDFEKGTLSYYRNQNS----------------------------------------GKLR 40 (89)
T ss_pred CcceeeccccCCCceeEEEEEEcCCcEEEEEecCCC----------------------------------------CeeE
Confidence 788777 79999999999999 9999999997543 1368
Q ss_pred eEEEcCceEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003839 174 GEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (792)
Q Consensus 174 G~I~L~~ssi~~~~~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~ 223 (792)
|+|+|..|.|..+. +.++|.|.+++.+|||+|.|.+|.+.||.||+.|+
T Consensus 41 Gsi~v~~a~is~~~-~~~~I~idsg~~i~hLKa~s~~~f~~Wv~aL~~a~ 89 (89)
T PF15409_consen 41 GSIDVSLAVISANK-KSRRIDIDSGDEIWHLKAKSQEDFQRWVSALQKAK 89 (89)
T ss_pred eEEEccceEEEecC-CCCEEEEEcCCeEEEEEcCCHHHHHHHHHHHHhcC
Confidence 99999999887654 67899999999999999999999999999999874
No 14
>cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.71 E-value=7.3e-17 Score=142.97 Aligned_cols=90 Identities=49% Similarity=0.881 Sum_probs=79.6
Q ss_pred eEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCcce
Q 003839 95 ISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFG 174 (792)
Q Consensus 95 ~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p~G 174 (792)
++|||+|+++..++|++|||||.++.|+||+++.+. ...|.|
T Consensus 1 ~~G~L~k~~~~~~~W~~r~~vl~~~~L~~~~~~~~~--------------------------------------~~~~~~ 42 (91)
T cd01246 1 VEGWLLKWTNYLKGWQKRWFVLDNGLLSYYKNKSSM--------------------------------------RGKPRG 42 (91)
T ss_pred CeEEEEEecccCCCceeeEEEEECCEEEEEecCccC--------------------------------------CCCceE
Confidence 589999999888999999999999999999986531 014789
Q ss_pred EEEcCceEEEecCCCCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHH
Q 003839 175 EVHLKVSSIRDSKSDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAV 222 (792)
Q Consensus 175 ~I~L~~ssi~~~~~d~~~F~I~t~~-k~~~L~A~s~~dr~~Wi~aL~~a 222 (792)
.|+|..+++..+..++..|.|.++. ++|+|+|+|.+|+.+||.||+.|
T Consensus 43 ~i~l~~~~~~~~~~~~~~F~i~~~~~~~~~~~a~s~~e~~~Wi~al~~a 91 (91)
T cd01246 43 TILLSGAVISEDDSDDKCFTIDTGGDKTLHLRANSEEERQRWVDALELA 91 (91)
T ss_pred EEEeceEEEEECCCCCcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHhC
Confidence 9999999988877778899999887 99999999999999999999875
No 15
>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet
Probab=99.71 E-value=5.6e-17 Score=146.60 Aligned_cols=88 Identities=28% Similarity=0.490 Sum_probs=74.0
Q ss_pred eEEEEEeecCCCC----CceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCC
Q 003839 95 ISGVLYKWVNYGK----GWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (792)
Q Consensus 95 ~~G~L~K~~n~~k----gWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (792)
++|||+|++..++ .|++|||||.++.|+||+++.+.
T Consensus 2 ~~GwL~kk~~~~g~~~k~WkkrwfvL~~~~L~yyk~~~~~---------------------------------------- 41 (96)
T cd01260 2 CDGWLWKRKKPGGFMGQKWARRWFVLKGTTLYWYRSKQDE---------------------------------------- 41 (96)
T ss_pred ceeEEEEecCCCCccccCceeEEEEEECCEEEEECCCCCC----------------------------------------
Confidence 6899999976544 89999999999999999976541
Q ss_pred CcceEEEcCceEEEecCC--CCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHH
Q 003839 171 KPFGEVHLKVSSIRDSKS--DDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAV 222 (792)
Q Consensus 171 ~p~G~I~L~~ssi~~~~~--d~~~F~I~t~~-k~~~L~A~s~~dr~~Wi~aL~~a 222 (792)
.|.|.|.|..+++....+ ....|.|.++. ++|+|+|+|.+|++.||.||+.|
T Consensus 42 ~~~~~I~L~~~~v~~~~~~~k~~~F~I~~~~~~~~~f~a~s~~e~~~Wi~ai~~~ 96 (96)
T cd01260 42 KAEGLIFLSGFTIESAKEVKKKYAFKVCHPVYKSFYFAAETLDDLSQWVNHLITA 96 (96)
T ss_pred ccceEEEccCCEEEEchhcCCceEEEECCCCCcEEEEEeCCHHHHHHHHHHHHhC
Confidence 367999999988765422 35678888887 99999999999999999999875
No 16
>cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain. Outspread Pleckstrin homology (PH) domain. Outspread contains two PH domains and a C-terminal coiled-coil region. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.67 E-value=2.3e-16 Score=144.97 Aligned_cols=88 Identities=26% Similarity=0.441 Sum_probs=70.8
Q ss_pred eEEEEEeec---------CCCCCceeeEEEEe-CCeEEEEeecCCCccccchhhcccccccccchhhhhhhccccccccc
Q 003839 95 ISGVLYKWV---------NYGKGWRPRWFVLQ-DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTS 164 (792)
Q Consensus 95 ~~G~L~K~~---------n~~kgWk~RwFVL~-~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~ 164 (792)
.+|||.|.. ...|+||+|||||. +|.|+||+.+..
T Consensus 1 ~~g~l~~~~~~~~~~~~~~~~K~WkrRWFvL~~~~~L~y~~d~~~----------------------------------- 45 (104)
T cd01236 1 YCGWLLVAPDGTDFDNPVHRSKRWQRRWFILYDHGLLTYALDEMP----------------------------------- 45 (104)
T ss_pred CcceeEEcCCCCcccccceeeccccceEEEEeCCCEEEEeeCCCC-----------------------------------
Confidence 369999973 24799999999996 688888875432
Q ss_pred ccccCCCcceEEEcCceEEEecCCC----CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHH
Q 003839 165 QRLLNRKPFGEVHLKVSSIRDSKSD----DKRFSIFTGTKRLHLRAETREDRFAWMEALQA 221 (792)
Q Consensus 165 ~~~~~~~p~G~I~L~~ssi~~~~~d----~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~ 221 (792)
..+|+|+|+|..|....+..+ ...|.|.|++|+|+|.|+|++|+++||++|..
T Consensus 46 ----~~~p~G~IdL~~~~~V~~~~~~~~~~~~f~I~tp~R~f~l~Aete~E~~~Wi~~l~~ 102 (104)
T cd01236 46 ----TTLPQGTIDMNQCTDVVDAEARTGQKFSICILTPDKEHFIKAETKEEISWWLNMLMV 102 (104)
T ss_pred ----CcccceEEEccceEEEeecccccCCccEEEEECCCceEEEEeCCHHHHHHHHHHHHh
Confidence 125889999998876554332 36799999999999999999999999999974
No 17
>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain. Cytohesin Pleckstrin homology (PH) domain. Cytohesin is an ARF-Guanine nucleotide Exchange Factor (GEF), which has a Sec7-type Arf-GEFdomain and a pleckstrin homology domain. It specifically binds phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4, 5)P3) via its PH domain and it acts as a PI 3-kinase effector mediating biological responses such as cell adhesion and membrane trafficking. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.66 E-value=8.2e-16 Score=146.01 Aligned_cols=92 Identities=26% Similarity=0.482 Sum_probs=77.1
Q ss_pred eEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCcce
Q 003839 95 ISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFG 174 (792)
Q Consensus 95 ~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p~G 174 (792)
++|||+|+++..++|++|||||.++.|+||+++.+ ..|.|
T Consensus 2 k~G~L~K~~~~~~~WkkRwfvL~~~~L~yyk~~~~----------------------------------------~~~~g 41 (125)
T cd01252 2 REGWLLKQGGRVKTWKRRWFILTDNCLYYFEYTTD----------------------------------------KEPRG 41 (125)
T ss_pred cEEEEEEeCCCCCCeEeEEEEEECCEEEEEcCCCC----------------------------------------CCceE
Confidence 68999999999999999999999999999997543 23789
Q ss_pred EEEcCceEEEecCC--CCCcEEEEeCC---------------------eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 003839 175 EVHLKVSSIRDSKS--DDKRFSIFTGT---------------------KRLHLRAETREDRFAWMEALQAVKDMF 226 (792)
Q Consensus 175 ~I~L~~ssi~~~~~--d~~~F~I~t~~---------------------k~~~L~A~s~~dr~~Wi~aL~~a~~~~ 226 (792)
.|+|..+.|..... ....|.|.+++ ++|+|+|+|.+|+++||+||+.++..-
T Consensus 42 ~I~L~~~~v~~~~~~~~~~~F~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~A~s~~e~~~Wi~al~~~~~~~ 116 (125)
T cd01252 42 IIPLENVSIREVEDPSKPFCFELFSPSDKQQIKACKTESDGRVVEGNHSVYRISAANDEEMDEWIKSIKASISPN 116 (125)
T ss_pred EEECCCcEEEEcccCCCCeeEEEECCccccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHhcC
Confidence 99999888776533 35568776644 579999999999999999999998753
No 18
>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. PH domains are only found in eukaryotes, and are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes. The IRS PH domain targets IRS molecules to the plasma membrane, usually in response to insulin stimulation.
Probab=99.65 E-value=1.1e-15 Score=139.99 Aligned_cols=90 Identities=23% Similarity=0.317 Sum_probs=72.9
Q ss_pred cceEEEEEeecCCCCCceeeEEEEeCC------eEEEEeecCCCccccchhhcccccccccchhhhhhhccccccccccc
Q 003839 93 NGISGVLYKWVNYGKGWRPRWFVLQDG------VLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQR 166 (792)
Q Consensus 93 ~~~~G~L~K~~n~~kgWk~RwFVL~~g------~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~ 166 (792)
+.++|||.|+ |.||+|||||.++ .|.||+++..-.
T Consensus 2 v~k~GyL~K~----K~~kkRwFVLr~~~~~~p~~Leyyk~ek~~~----------------------------------- 42 (101)
T cd01257 2 VRKSGYLRKQ----KSMHKRFFVLRAESSGGPARLEYYENEKKFL----------------------------------- 42 (101)
T ss_pred ccEEEEEeEe----cCcEeEEEEEecCCCCCCceEEEECChhhcc-----------------------------------
Confidence 5789999997 8999999999877 899999765310
Q ss_pred ccCCCcceEEEcCceEEEecCCC---CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHH
Q 003839 167 LLNRKPFGEVHLKVSSIRDSKSD---DKRFSIFTGTKRLHLRAETREDRFAWMEALQA 221 (792)
Q Consensus 167 ~~~~~p~G~I~L~~ssi~~~~~d---~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~ 221 (792)
.+...|+|+|+|..|.......+ ...|.|.|++++|+|.|+|++|++.||++|..
T Consensus 43 ~~~~~p~~vI~L~~c~~v~~~~d~k~~~~f~i~t~dr~f~l~aese~E~~~Wi~~i~~ 100 (101)
T cd01257 43 QKGSAPKRVIPLESCFNINKRADAKHRHLIALYTRDEYFAVAAENEAEQDSWYQALLE 100 (101)
T ss_pred ccCCCceEEEEccceEEEeeccccccCeEEEEEeCCceEEEEeCCHHHHHHHHHHHhh
Confidence 01245899999999975443333 45788999999999999999999999999964
No 19
>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain. Gab (Grb2-associated binder) pleckstrin homology (PH) domain. The Gab subfamily includes several Gab proteins, Drosophila DOS and C. elegans SOC-1. They are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display str
Probab=99.64 E-value=1e-15 Score=141.87 Aligned_cols=88 Identities=30% Similarity=0.388 Sum_probs=70.4
Q ss_pred eEEEEEeecCCC----CCceeeEEEEeCCe-------EEEEeecCCCccccchhhcccccccccchhhhhhhcccccccc
Q 003839 95 ISGVLYKWVNYG----KGWRPRWFVLQDGV-------LSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETT 163 (792)
Q Consensus 95 ~~G~L~K~~n~~----kgWk~RwFVL~~g~-------L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~ 163 (792)
.+|||.|.+... ++||+|||||.++. |+||+++.+
T Consensus 1 ~eGwL~K~~~~~~~~~~~WkrRwFvL~~~~l~~~~~~L~Yyk~~~~---------------------------------- 46 (108)
T cd01266 1 LEGWLKKSPPYKLLFRTKWVRRYFVLHCGDRERNLFALEYYKTSRK---------------------------------- 46 (108)
T ss_pred CceeeeeCCccccccccCcEEEEEEEeccccCCCcceEEEECCCCC----------------------------------
Confidence 479999998754 49999999998765 699997543
Q ss_pred cccccCCCcceEEEcCceEEEecC----CCC----CcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 003839 164 SQRLLNRKPFGEVHLKVSSIRDSK----SDD----KRFSIFTGTKRLHLRAETREDRFAWMEALQAV 222 (792)
Q Consensus 164 ~~~~~~~~p~G~I~L~~ssi~~~~----~d~----~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a 222 (792)
.+|.|.|.|..+.+.... ..+ ..|.|.++.|+|+|.|+|++|+++||.||+.+
T Consensus 47 ------~k~~g~I~L~~~~~v~~~~~~~~~~~~~~~~f~i~t~~r~y~l~A~s~ee~~~Wi~~I~~~ 107 (108)
T cd01266 47 ------FKLEFVIDLESCSQVDPGLLCTAGNCIFGYGFDIETIVRDLYLVAKNEEEMTLWVNCICKL 107 (108)
T ss_pred ------CccceEEECCccEEEcccccccccCcccceEEEEEeCCccEEEEECCHHHHHHHHHHHHhh
Confidence 248899999987754321 112 23889999999999999999999999999753
No 20
>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain. Centaurin Pleckstrin homology (PH) domain. Centaurin beta and gamma consist of a PH domain, an ArfGAP domain and three ankyrin repeats. Centaurain gamma also has an N-terminal Ras homology domain. Centaurin alpha has a different domain architecture and its PH domain is in a different subfamily. Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.61 E-value=2.9e-15 Score=133.52 Aligned_cols=90 Identities=30% Similarity=0.585 Sum_probs=74.3
Q ss_pred eEEEEEeecCC-CCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCcc
Q 003839 95 ISGVLYKWVNY-GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (792)
Q Consensus 95 ~~G~L~K~~n~-~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p~ 173 (792)
++|||.|++.. .++|++|||||.++.|.||+.+... ...+.
T Consensus 1 k~G~L~kk~~~~~~~W~kr~~~L~~~~l~~y~~~~~~--------------------------------------~~~~~ 42 (94)
T cd01250 1 KQGYLYKRSSKSNKEWKKRWFVLKNGQLTYHHRLKDY--------------------------------------DNAHV 42 (94)
T ss_pred CcceEEEECCCcCCCceEEEEEEeCCeEEEEcCCccc--------------------------------------ccccc
Confidence 48999999855 7899999999999999999975431 11356
Q ss_pred eEEEcCceEEEecCCC---CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 003839 174 GEVHLKVSSIRDSKSD---DKRFSIFTGTKRLHLRAETREDRFAWMEALQAV 222 (792)
Q Consensus 174 G~I~L~~ssi~~~~~d---~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a 222 (792)
+.|.|..+++...... ...|.|.+++++|+|+|+|.+|++.||.||+.+
T Consensus 43 ~~i~l~~~~v~~~~~~~~~~~~f~i~~~~~~~~f~a~s~~~~~~Wi~al~~~ 94 (94)
T cd01250 43 KEIDLRRCTVRHNGKQPDRRFCFEVISPTKTWHFQADSEEERDDWISAIQES 94 (94)
T ss_pred eEEeccceEEecCccccCCceEEEEEcCCcEEEEECCCHHHHHHHHHHHhcC
Confidence 8999998877655443 567999999999999999999999999999863
No 21
>cd01241 PH_Akt Akt pleckstrin homology (PH) domain. Akt pleckstrin homology (PH) domain. Akt (Protein Kinase B (PKB)) is a phosphatidylinositol 3'-kinase (PI3K)-dependent Ser/Thr kinase. The PH domain recruits Akt to the plasma membrane by binding to phosphoinositides (PtdIns-3,4-P2) and is required for activation. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.60 E-value=5.6e-15 Score=135.61 Aligned_cols=94 Identities=28% Similarity=0.423 Sum_probs=67.7
Q ss_pred cceEEEEEeecCCCCCceeeEEEEe-CCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCC
Q 003839 93 NGISGVLYKWVNYGKGWRPRWFVLQ-DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (792)
Q Consensus 93 ~~~~G~L~K~~n~~kgWk~RwFVL~-~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (792)
++++|||.|+++..+.|++|||||+ ++.|.||+.+..+. .....
T Consensus 1 v~k~G~L~K~g~~~~~Wk~R~f~L~~~~~l~~yk~~~~~~-----------------------------------~~~~i 45 (102)
T cd01241 1 VVKEGWLHKRGEYIKTWRPRYFLLKSDGSFIGYKEKPEDG-----------------------------------DPFLP 45 (102)
T ss_pred CcEEEEEEeecCCCCCCeeEEEEEeCCCeEEEEecCCCcc-----------------------------------Ccccc
Confidence 3589999999999999999999998 89999999755321 00012
Q ss_pred cceEEEcCceEEEe-cCCCCCcEEEE------eCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003839 172 PFGEVHLKVSSIRD-SKSDDKRFSIF------TGTKRLHLRAETREDRFAWMEALQAVK 223 (792)
Q Consensus 172 p~G~I~L~~ssi~~-~~~d~~~F~I~------t~~k~~~L~A~s~~dr~~Wi~aL~~a~ 223 (792)
|.+.+.|..|++.. .......|.|. +..|+| .|+|.+||++||+||+.++
T Consensus 46 ~l~~~~v~~~~~~~~~~~~~~~F~i~~~~~~~~~~r~f--~a~s~ee~~eWi~ai~~v~ 102 (102)
T cd01241 46 PLNNFSVAECQLMKTERPRPNTFIIRCLQWTTVIERTF--HVESPEEREEWIHAIQTVA 102 (102)
T ss_pred ccCCeEEeeeeeeeccCCCcceEEEEeccCCcccCEEE--EeCCHHHHHHHHHHHHhhC
Confidence 34555555555532 23335689987 234555 5999999999999999863
No 22
>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]. The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....
Probab=99.53 E-value=1.2e-13 Score=123.05 Aligned_cols=93 Identities=32% Similarity=0.496 Sum_probs=79.4
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCcc
Q 003839 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (792)
Q Consensus 94 ~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p~ 173 (792)
+++|||.|++...++|++|||||.++.|+||++.... ....|.
T Consensus 2 ~~~G~L~~~~~~~~~wk~r~~vL~~~~L~~~~~~~~~-------------------------------------~~~~~~ 44 (104)
T PF00169_consen 2 IKEGWLLKKSSSRKKWKKRYFVLRDSYLLYYKSSKDK-------------------------------------SDSKPK 44 (104)
T ss_dssp EEEEEEEEEESSSSSEEEEEEEEETTEEEEESSTTTT-------------------------------------TESSES
T ss_pred EEEEEEEEECCCCCCeEEEEEEEECCEEEEEecCccc-------------------------------------cceeee
Confidence 6899999999899999999999999999999976520 123478
Q ss_pred eEEEcCceEEEecCC--------CCCcEEEEeCCe-EEEEEcCCHHHHHHHHHHHHHHH
Q 003839 174 GEVHLKVSSIRDSKS--------DDKRFSIFTGTK-RLHLRAETREDRFAWMEALQAVK 223 (792)
Q Consensus 174 G~I~L~~ssi~~~~~--------d~~~F~I~t~~k-~~~L~A~s~~dr~~Wi~aL~~a~ 223 (792)
+.|+|..+.|..... ....|.|.++.+ +|+|+|+|.+++.+||++|+.|.
T Consensus 45 ~~i~l~~~~v~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~s~~~~~~W~~~i~~~~ 103 (104)
T PF00169_consen 45 GSIPLDDCTVRPDPSSDFLSNKKRKNCFEITTPNGKSYLFSAESEEERKRWIQAIQKAI 103 (104)
T ss_dssp EEEEGTTEEEEEETSSTSTSTSSSSSEEEEEETTSEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred EEEEecCceEEEcCccccccccCCCcEEEEEeCCCcEEEEEcCCHHHHHHHHHHHHHHh
Confidence 999999998876433 367799999876 99999999999999999999985
No 23
>cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. This protein has a domain architecture of SH2-SH3-SH2-PH-C2-Ras_GAP. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.53 E-value=2.8e-14 Score=129.81 Aligned_cols=85 Identities=25% Similarity=0.313 Sum_probs=72.9
Q ss_pred EEEEEeecCC-CCCceeeEEEEeC----CeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCC
Q 003839 96 SGVLYKWVNY-GKGWRPRWFVLQD----GVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (792)
Q Consensus 96 ~G~L~K~~n~-~kgWk~RwFVL~~----g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (792)
.|||.|++.. .|.||+|||+|.+ +.|+||+.+.+.
T Consensus 2 ~G~l~K~g~~~~K~wK~rwF~l~~~~s~~~l~yf~~~~~~---------------------------------------- 41 (98)
T cd01245 2 KGNLLKRTKSVTKLWKTLYFALILDGSRSHESLLSSPKKT---------------------------------------- 41 (98)
T ss_pred CCccccCCCCcccccceeEEEEecCCCCceEEEEcCCCCC----------------------------------------
Confidence 5999999877 9999999999975 999999976542
Q ss_pred CcceEEEcCceEEEecCC----CCCcEEEEeCCe--EEEEEcCCHHHHHHHHHHHHH
Q 003839 171 KPFGEVHLKVSSIRDSKS----DDKRFSIFTGTK--RLHLRAETREDRFAWMEALQA 221 (792)
Q Consensus 171 ~p~G~I~L~~ssi~~~~~----d~~~F~I~t~~k--~~~L~A~s~~dr~~Wi~aL~~ 221 (792)
.|+|.|+|..+.|+...+ .+..|.|.++.+ +|+++|++ +||++||++|+.
T Consensus 42 ~p~gli~l~~~~V~~v~ds~~~r~~cFel~~~~~~~~y~~~a~~-~er~~Wi~~l~~ 97 (98)
T cd01245 42 KPIGLIDLSDAYLYPVHDSLFGRPNCFQIVERALPTVYYSCRSS-EERDKWIESLQA 97 (98)
T ss_pred CccceeeccccEEEEccccccCCCeEEEEecCCCCeEEEEeCCH-HHHHHHHHHHhc
Confidence 478999999998876433 258899999876 89999999 999999999985
No 24
>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. This protein consists of two C2 domains, followed by a RasGAP domain, a PH domain and a BTK domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.52 E-value=6.3e-14 Score=127.69 Aligned_cols=85 Identities=18% Similarity=0.164 Sum_probs=66.8
Q ss_pred EEEEeec----CCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCc
Q 003839 97 GVLYKWV----NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (792)
Q Consensus 97 G~L~K~~----n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p 172 (792)
|.|.|+. ...++||+|||||.++.|+||+.+. ..|
T Consensus 5 ~~~~kr~~~~~~~~~n~KkRwF~Lt~~~L~Y~k~~~-----------------------------------------~~~ 43 (98)
T cd01244 5 LQQVDRSRLAWKKVLHFKKRYFQLTTTHLSWAKDVQ-----------------------------------------CKK 43 (98)
T ss_pred cEEEEcccCCCccCcCCceeEEEECCCEEEEECCCC-----------------------------------------Cce
Confidence 4556653 2347899999999999999999543 247
Q ss_pred ceEEEcCceEEEecCC-----CCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 003839 173 FGEVHLKVSSIRDSKS-----DDKRFSIFTGTKRLHLRAETREDRFAWMEALQAV 222 (792)
Q Consensus 173 ~G~I~L~~ssi~~~~~-----d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a 222 (792)
+|+|+|......+.-. ....|.|.++.++|+|+|+|.+||++||.||+.+
T Consensus 44 ~g~I~L~~i~~ve~v~~~~~~~~~~fqivt~~r~~yi~a~s~~E~~~Wi~al~k~ 98 (98)
T cd01244 44 SALIKLAAIKGTEPLSDKSFVNVDIITIVCEDDTMQLQFEAPVEATDWLNALEKQ 98 (98)
T ss_pred eeeEEccceEEEEEcCCcccCCCceEEEEeCCCeEEEECCCHHHHHHHHHHHhcC
Confidence 8999998665443211 1467999999999999999999999999999864
No 25
>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD has a RhoGEF (DH) domain, followed by a PH domain, a FYVE domain and a C-terminal PH domain. FGD is a guanine nucleotide exchange factor that activates the Rho GTPase Cdc42. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.45 E-value=7.2e-13 Score=121.48 Aligned_cols=96 Identities=16% Similarity=0.193 Sum_probs=79.8
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCcc
Q 003839 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (792)
Q Consensus 94 ~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p~ 173 (792)
+++|+|.|.+...++||+|||.|-+++|.|++.+... .....+++
T Consensus 3 ikeG~L~K~~~~~~~~k~RyffLFnd~Ll~~~~~~~~-----------------------------------~~~~y~~~ 47 (101)
T cd01219 3 LKEGSVLKISSTTEKTEERYLFLFNDLLLYCVPRKMI-----------------------------------GGSKFKVR 47 (101)
T ss_pred ccceEEEEEecCCCCceeEEEEEeCCEEEEEEccccc-----------------------------------CCCcEEEE
Confidence 5799999999999999999999977799999954210 01123578
Q ss_pred eEEEcCceEEEecC--CCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003839 174 GEVHLKVSSIRDSK--SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKD 224 (792)
Q Consensus 174 G~I~L~~ssi~~~~--~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~ 224 (792)
+.|+|....|.... ..++.|.|.+..|+|+|.|+|++|+.+||+||+.|++
T Consensus 48 ~~i~l~~~~v~~~~~~~~~~~F~I~~~~rsf~l~A~s~eEk~~W~~ai~~~i~ 100 (101)
T cd01219 48 ARIDVSGMQVCEGDNLERPHSFLVSGKQRCLELQARTQKEKNDWVQAIFSIID 100 (101)
T ss_pred EEEecccEEEEeCCCCCcCceEEEecCCcEEEEEcCCHHHHHHHHHHHHHHhh
Confidence 99999998887653 2378899999999999999999999999999999975
No 26
>cd01263 PH_anillin Anillin Pleckstrin homology (PH) domain. Anillin Pleckstrin homology (PH) domain. Anillin is an actin binding protein involved in cytokinesis. It has a C-terminal PH domain, which has been shown to be necessary, but not sufficient for targetting of anillin to ectopic septin containing foci . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.36 E-value=2.6e-12 Score=121.38 Aligned_cols=92 Identities=22% Similarity=0.445 Sum_probs=70.3
Q ss_pred ceEEEEEe-e-cCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCC
Q 003839 94 GISGVLYK-W-VNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (792)
Q Consensus 94 ~~~G~L~K-~-~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (792)
...|||.- + ++..|.|++|||||+++.|+||+.+.+. ....
T Consensus 2 ~~~GfL~~~q~~~~~k~W~RRWFvL~g~~L~y~k~p~d~-------------------------------------~~~~ 44 (122)
T cd01263 2 EYHGFLTMFEDTSGFGAWHRRWCALEGGEIKYWKYPDDE-------------------------------------KRKG 44 (122)
T ss_pred ccceeEEEEeccCCCCCceEEEEEEeCCEEEEEcCCCcc-------------------------------------ccCC
Confidence 45799984 3 6788999999999999999999976541 1235
Q ss_pred cceEEEcCceEEEecC-------CCCCcEEEEe--CC-----------------eE-EEEEcCCHHHHHHHHHHHHHH
Q 003839 172 PFGEVHLKVSSIRDSK-------SDDKRFSIFT--GT-----------------KR-LHLRAETREDRFAWMEALQAV 222 (792)
Q Consensus 172 p~G~I~L~~ssi~~~~-------~d~~~F~I~t--~~-----------------k~-~~L~A~s~~dr~~Wi~aL~~a 222 (792)
|.|.|.|..|.+.... ...+.|.|.+ ++ ++ +.|.|+|.+||+.||.||+.|
T Consensus 45 Plg~I~L~~c~~~~v~~~~r~~c~Rp~tF~i~~~~~~~~~~~~~~~~~~~~~~~r~~~~lsaDt~eer~~W~~ain~~ 122 (122)
T cd01263 45 PTGLIDLSTCTSSEGASAVRDICARPNTFHLDVWRPKMETDDETLVSQCRRGIERLRVMLSADTKEERQTWLSLLNST 122 (122)
T ss_pred ceEEEEhhhCcccccccCChhhcCCCCeEEEEEecccccccccceeeccCCceeEEEEEEecCCHHHHHHHHHHHhcC
Confidence 8999999998865431 2356687743 22 44 568999999999999999864
No 27
>cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain. Unc-112 pleckstrin homology (PH) domain. Unc-112 and related proteins contain two FERM domains with a PH domain between them. Both the PH and FERM domains have a PH-like fold. The FERM domains are likely responsible for the role of Unc-112 in organizing beta-integrin. The specific role of the Unc-112 PH domain is not known, but it is predicted to be involved in mediating membrane interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.36 E-value=2.4e-12 Score=117.75 Aligned_cols=80 Identities=26% Similarity=0.570 Sum_probs=63.7
Q ss_pred CCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCcceEEEcCceEEEe
Q 003839 106 GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFGEVHLKVSSIRD 185 (792)
Q Consensus 106 ~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p~G~I~L~~ssi~~ 185 (792)
.|+||+|||+|+|+.|+|||++.+. ...|.+.|+|.+|.|..
T Consensus 17 ~K~~KrrwF~lk~~~L~YyK~kee~--------------------------------------~~~p~i~lnl~gcev~~ 58 (106)
T cd01237 17 LKGYKQYWFTFRDTSISYYKSKEDS--------------------------------------NGAPIGQLNLKGCEVTP 58 (106)
T ss_pred hhhheeEEEEEeCCEEEEEccchhc--------------------------------------CCCCeEEEecCceEEcc
Confidence 5889999999999999999986541 12367889999999876
Q ss_pred cCC-CCCcEE--EEeCC----eEEEEEcCCHHHHHHHHHHHHHHH
Q 003839 186 SKS-DDKRFS--IFTGT----KRLHLRAETREDRFAWMEALQAVK 223 (792)
Q Consensus 186 ~~~-d~~~F~--I~t~~----k~~~L~A~s~~dr~~Wi~aL~~a~ 223 (792)
+.. ....|. +.++. ++|+|+|+|+++++.||.|++.|-
T Consensus 59 dv~~~~~kf~I~l~~ps~~~~r~y~l~cdsEeqya~Wmaa~rlas 103 (106)
T cd01237 59 DVNVAQQKFHIKLLIPTAEGMNEVWLRCDNEKQYAKWMAACRLAS 103 (106)
T ss_pred cccccccceEEEEecCCccCCeEEEEECCCHHHHHHHHHHHHHhh
Confidence 641 133455 45555 999999999999999999999874
No 28
>KOG0930 consensus Guanine nucleotide exchange factor Cytohesin, contains PH and Sec7 domains [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.33 E-value=3.8e-12 Score=131.85 Aligned_cols=97 Identities=27% Similarity=0.510 Sum_probs=78.9
Q ss_pred CCcceEEEEEeec-CCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccC
Q 003839 91 VGNGISGVLYKWV-NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (792)
Q Consensus 91 ~~~~~~G~L~K~~-n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~ 169 (792)
-.+..+|||.|.+ |-.+.||+|||+|.|++|+||.--.+
T Consensus 258 fnpdREGWLlKlgg~rvktWKrRWFiLtdNCLYYFe~tTD---------------------------------------- 297 (395)
T KOG0930|consen 258 FNPDREGWLLKLGGNRVKTWKRRWFILTDNCLYYFEYTTD---------------------------------------- 297 (395)
T ss_pred cCccccceeeeecCCcccchhheeEEeecceeeeeeeccC----------------------------------------
Confidence 3678999999996 58899999999999999999995443
Q ss_pred CCcceEEEcCceEEEecCC--CCCcEEEEeC----------------------CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 170 RKPFGEVHLKVSSIRDSKS--DDKRFSIFTG----------------------TKRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 170 ~~p~G~I~L~~ssi~~~~~--d~~~F~I~t~----------------------~k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
..|+|.|.|..-+|+.... .+.+|.|+.+ ...|.++|.+.+|+..||++|++++..
T Consensus 298 KEPrGIIpLeNlsir~VedP~kP~cfEly~ps~~gq~IKACKTe~DGRvVEG~H~vYrIsA~~~Ee~~~Wi~sI~a~is~ 377 (395)
T KOG0930|consen 298 KEPRGIIPLENLSIREVEDPKKPNCFELYIPSNKGQVIKACKTEADGRVVEGNHSVYRISAPTPEEKDEWIKSIKAAISR 377 (395)
T ss_pred CCCCcceeccccceeeccCCCCCCeEEEecCCCCcCeeeeecccCCceeEeccceEEEeeCCCHHHHHHHHHHHHHHhcc
Confidence 2489999999888876543 3667776642 135999999999999999999999885
Q ss_pred cc
Q 003839 226 FP 227 (792)
Q Consensus 226 ~~ 227 (792)
-|
T Consensus 378 ~P 379 (395)
T KOG0930|consen 378 DP 379 (395)
T ss_pred Cc
Confidence 44
No 29
>smart00233 PH Pleckstrin homology domain. Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.
Probab=99.31 E-value=2.8e-11 Score=105.90 Aligned_cols=93 Identities=32% Similarity=0.537 Sum_probs=77.9
Q ss_pred ceEEEEEeecC-CCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCc
Q 003839 94 GISGVLYKWVN-YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (792)
Q Consensus 94 ~~~G~L~K~~n-~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p 172 (792)
.++|||.++.. ....|++|||+|.++.|.||+..... ....+
T Consensus 2 ~~~G~l~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~-------------------------------------~~~~~ 44 (102)
T smart00233 2 IKEGWLYKKSGGKKKSWKKRYFVLFNSTLLYYKSEKAK-------------------------------------KDYKP 44 (102)
T ss_pred ceeEEEEEeCCCccCCceEEEEEEECCEEEEEeCCCcc-------------------------------------ccCCC
Confidence 58999999987 67889999999999999999975431 01246
Q ss_pred ceEEEcCceEEEecCC-----CCCcEEEEeCCe-EEEEEcCCHHHHHHHHHHHHHHH
Q 003839 173 FGEVHLKVSSIRDSKS-----DDKRFSIFTGTK-RLHLRAETREDRFAWMEALQAVK 223 (792)
Q Consensus 173 ~G~I~L~~ssi~~~~~-----d~~~F~I~t~~k-~~~L~A~s~~dr~~Wi~aL~~a~ 223 (792)
.+.|+|..+.+..... ....|.|.++++ +|+|+|+|.+|+..|+.+|+.+.
T Consensus 45 ~~~i~l~~~~v~~~~~~~~~~~~~~f~l~~~~~~~~~f~~~s~~~~~~W~~~i~~~~ 101 (102)
T smart00233 45 KGSIDLSGITVREAPDPDSAKKPHCFEIKTADRRSYLLQAESEEEREEWVDALRKAI 101 (102)
T ss_pred ceEEECCcCEEEeCCCCccCCCceEEEEEecCCceEEEEcCCHHHHHHHHHHHHHhh
Confidence 7999999988876654 367889988887 99999999999999999999875
No 30
>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain. Phospholipase D (PLD) pleckstrin homology (PH) domain. PLD hydrolyzes phosphatidylcholine to phosphatidic acid (PtdOH), which can bind target proteins. PLD contains a PH domain, a PX domain and four conserved PLD signature domains. The PLD PH domain is specific for bisphosphorylated inositides. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.27 E-value=1.7e-11 Score=116.15 Aligned_cols=88 Identities=16% Similarity=0.399 Sum_probs=64.9
Q ss_pred eEEEEEeecCC------------------CCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhc
Q 003839 95 ISGVLYKWVNY------------------GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKR 156 (792)
Q Consensus 95 ~~G~L~K~~n~------------------~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~ 156 (792)
+|||++|+++. ...|++|||||+++.|.||++..+.
T Consensus 1 keG~i~kr~g~~~~~~~~~~~~~~~~~~~~~~w~kRWFvlr~s~L~Y~~~~~~~-------------------------- 54 (121)
T cd01254 1 KEGYIMKRSGGKRSGSDDCSFGCCCFCRMCDRWQKRWFIVKESFLAYMDDPSSA-------------------------- 54 (121)
T ss_pred CCceEEeCCCCCcCCcccccccccCCcccccCCcceeEEEeCCEEEEEcCCCCC--------------------------
Confidence 47888887432 1169999999999999999975541
Q ss_pred ccccccccccccCCCcceEEEcCceE-EEec--------------CCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHH
Q 003839 157 KHKKETTSQRLLNRKPFGEVHLKVSS-IRDS--------------KSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQA 221 (792)
Q Consensus 157 ~~~~~~~~~~~~~~~p~G~I~L~~ss-i~~~--------------~~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~ 221 (792)
.|+|+|.|.... |... ......|.|.+++|+|.|.|+|..++++||++|+.
T Consensus 55 --------------~~~~vil~D~~f~v~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~R~~~l~a~s~~~~~~Wi~~i~~ 120 (121)
T cd01254 55 --------------QILDVILFDVDFKVNGGGKEDISLAVELKDITGLRHGLKITNSNRSLKLKCKSSRKLKQWMASIED 120 (121)
T ss_pred --------------ceeeEEEEcCCccEEeCCcccccccccccccCCCceEEEEEcCCcEEEEEeCCHHHHHHHHHHHHh
Confidence 245666554322 2211 12246788999999999999999999999999987
Q ss_pred H
Q 003839 222 V 222 (792)
Q Consensus 222 a 222 (792)
|
T Consensus 121 a 121 (121)
T cd01254 121 A 121 (121)
T ss_pred C
Confidence 5
No 31
>cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain. Beta-spectrin pleckstrin homology (PH) domain. Beta spectrin binds actin and functions as a major component of the cytoskeleton underlying cellular membranes. Beta spectrin consists of multiple spectrin repeats followed by a PH domain, which binds to Inositol-1,4,5-Trisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. PH domains are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.19 E-value=9.6e-11 Score=107.46 Aligned_cols=90 Identities=20% Similarity=0.313 Sum_probs=65.5
Q ss_pred eEEEEEe-ec-------CCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhccccccccccc
Q 003839 95 ISGVLYK-WV-------NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQR 166 (792)
Q Consensus 95 ~~G~L~K-~~-------n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~ 166 (792)
++|||.. .. ...+.|++|||||.++.|+||+.+....
T Consensus 1 ~~g~l~rk~~~~~~g~~~~~~~Wk~r~~vL~~~~L~~ykd~~~~~----------------------------------- 45 (104)
T cd01253 1 MEGSLERKHELESGGKKASNRSWDNVYGVLCGQSLSFYKDEKMAA----------------------------------- 45 (104)
T ss_pred CCceEeEEEEeecCCcccCCCCcceEEEEEeCCEEEEEecCcccc-----------------------------------
Confidence 4788873 32 1457899999999999999999764310
Q ss_pred ccCCCcce--EEEcCceEEEecCC---CCCcEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHH
Q 003839 167 LLNRKPFG--EVHLKVSSIRDSKS---DDKRFSIFTG-TKRLHLRAETREDRFAWMEALQAV 222 (792)
Q Consensus 167 ~~~~~p~G--~I~L~~ssi~~~~~---d~~~F~I~t~-~k~~~L~A~s~~dr~~Wi~aL~~a 222 (792)
..+.| .|+|..+.|....+ .+..|.|.+. +++|.|+|+|.++++.||.||+++
T Consensus 46 ---~~~~~~~~i~l~~~~i~~~~~~~k~~~~F~l~~~~~~~~~f~a~s~e~~~~Wi~aL~~~ 104 (104)
T cd01253 46 ---ENVHGEPPVDLTGAQCEVASDYTKKKHVFRLRLPDGAEFLFQAPDEEEMSSWVRALKSA 104 (104)
T ss_pred ---cCCCCCCcEeccCCEEEecCCcccCceEEEEEecCCCEEEEECCCHHHHHHHHHHHhcC
Confidence 00122 67777776655433 2567888654 589999999999999999999864
No 32
>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. CDEP consists of a Ferm domain, a rhoGEF (DH) domain followed by two PH domains. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.15 E-value=3.6e-10 Score=103.38 Aligned_cols=93 Identities=20% Similarity=0.267 Sum_probs=69.5
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCcc
Q 003839 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (792)
Q Consensus 94 ~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p~ 173 (792)
+++|+|.|.... +.|+|+||.+.|-.|++.+..++. ....++
T Consensus 3 ikEG~L~K~~~k-~~~~R~~FLFnD~LlY~~~~~~~~-------------------------------------~~y~~~ 44 (99)
T cd01220 3 IRQGCLLKLSKK-GLQQRMFFLFSDLLLYTSKSPTDQ-------------------------------------NSFRIL 44 (99)
T ss_pred eeEEEEEEEeCC-CCceEEEEEccceEEEEEeecCCC-------------------------------------ceEEEE
Confidence 579999998753 346655666677555554432210 112468
Q ss_pred eEEEcCceEEEecCCC---CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003839 174 GEVHLKVSSIRDSKSD---DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKD 224 (792)
Q Consensus 174 G~I~L~~ssi~~~~~d---~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~ 224 (792)
|.|+|....|.....+ .+.|.|.++.|.|.|.|.|++|+.+||++|+.|++
T Consensus 45 ~~i~L~~~~V~~~~~~~~~~~~F~I~~~~ks~~l~A~s~~Ek~~Wi~~i~~aI~ 98 (99)
T cd01220 45 GHLPLRGMLTEESEHEWGVPHCFTIFGGQCAITVAASTRAEKEKWLADLSKAIA 98 (99)
T ss_pred EEEEcCceEEeeccCCcCCceeEEEEcCCeEEEEECCCHHHHHHHHHHHHHHhh
Confidence 9999999988765442 57899999999999999999999999999999985
No 33
>cd00821 PH Pleckstrin homology (PH) domain. Pleckstrin homology (PH) domain. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.12 E-value=2.9e-10 Score=98.52 Aligned_cols=91 Identities=38% Similarity=0.644 Sum_probs=74.9
Q ss_pred eEEEEEeecCCC-CCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCcc
Q 003839 95 ISGVLYKWVNYG-KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (792)
Q Consensus 95 ~~G~L~K~~n~~-kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p~ 173 (792)
++|||.++.... ..|++|||+|.++.|.||+...... ...+.
T Consensus 1 ~~G~l~~~~~~~~~~w~~~~~~L~~~~l~~~~~~~~~~-------------------------------------~~~~~ 43 (96)
T cd00821 1 KEGYLLKKTGKLRKGWKRRWFVLFNDLLLYYKKKSSKK-------------------------------------SYKPK 43 (96)
T ss_pred CcchhhhhhChhhCCccEEEEEEECCEEEEEECCCCCc-------------------------------------CCCCc
Confidence 479999987665 7899999999999999999654310 13477
Q ss_pred eEEEcCceEEEecCCC---CCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHH
Q 003839 174 GEVHLKVSSIRDSKSD---DKRFSIFTGT-KRLHLRAETREDRFAWMEALQAV 222 (792)
Q Consensus 174 G~I~L~~ssi~~~~~d---~~~F~I~t~~-k~~~L~A~s~~dr~~Wi~aL~~a 222 (792)
+.|.|..+.+...... .+.|.|.+.. +.|+|+|+|.+|+..|+.+|+.+
T Consensus 44 ~~i~l~~~~v~~~~~~~~~~~~f~i~~~~~~~~~~~~~s~~~~~~W~~~l~~~ 96 (96)
T cd00821 44 GSIPLSGAEVEESPDDSGRKNCFEIRTPDGRSYLLQAESEEEREEWIEALQSA 96 (96)
T ss_pred ceEEcCCCEEEECCCcCCCCcEEEEecCCCcEEEEEeCCHHHHHHHHHHHhcC
Confidence 9999999888776553 6889998877 99999999999999999999864
No 34
>KOG1739 consensus Serine/threonine protein kinase GPBP [Signal transduction mechanisms; Defense mechanisms]
Probab=99.08 E-value=8.5e-11 Score=129.44 Aligned_cols=95 Identities=35% Similarity=0.567 Sum_probs=86.1
Q ss_pred CcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCC
Q 003839 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (792)
Q Consensus 92 ~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (792)
-..+.|+|.||+||+.||+.|||||.+|.|+||++...+ .++
T Consensus 23 w~e~~G~lskwtnyi~gwqdRyv~lk~g~Lsyykse~E~------------------------------------~hG-- 64 (611)
T KOG1739|consen 23 WVERCGVLSKWTNYIHGWQDRYVVLKNGALSYYKSEDET------------------------------------EHG-- 64 (611)
T ss_pred chhhcceeeeeecccccccceEEEEcccchhhhhhhhhh------------------------------------hcc--
Confidence 456899999999999999999999999999999986431 122
Q ss_pred cceEEEcCceEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003839 172 PFGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKD 224 (792)
Q Consensus 172 p~G~I~L~~ssi~~~~~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~ 224 (792)
+||.|.|+.+.|..+..|.++|.|.++...++|+|.+...++.|+++|+-.+.
T Consensus 65 cRgsi~l~ka~i~ahEfDe~rfdIsvn~nv~~lra~~~~hr~~w~d~L~wmk~ 117 (611)
T KOG1739|consen 65 CRGSICLSKAVITAHEFDECRFDISVNDNVWYLRAQDPDHRQQWIDALEWMKT 117 (611)
T ss_pred cceeeEeccCCcccccchhheeeeEeccceeeehhcCcHHHHHHHHHHHHHhh
Confidence 57999999999999999999999999999999999999999999999998876
No 35
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.03 E-value=1.9e-10 Score=122.52 Aligned_cols=101 Identities=26% Similarity=0.406 Sum_probs=77.5
Q ss_pred CCCcceEEEEEeecCCCCCceeeEEEE-eCCeEEEEeecCCCccccchhhcccccccccchhhhhhhccccccccccccc
Q 003839 90 IVGNGISGVLYKWVNYGKGWRPRWFVL-QDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (792)
Q Consensus 90 ~~~~~~~G~L~K~~n~~kgWk~RwFVL-~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~ 168 (792)
.+.++++|||+|++.++|+||+|||+| .||.|.-|+.+..+. ..
T Consensus 12 ~~~vvkEgWlhKrGE~IknWRpRYF~l~~DG~~~Gyr~kP~~~-----------------------------------~~ 56 (516)
T KOG0690|consen 12 QEDVVKEGWLHKRGEHIKNWRPRYFLLFNDGTLLGYRSKPKEV-----------------------------------QP 56 (516)
T ss_pred hhhhHHhhhHhhcchhhhcccceEEEEeeCCceEeeccCCccC-----------------------------------CC
Confidence 456789999999999999999999999 899999999876421 11
Q ss_pred CCCcceEEEcCceEE-EecCCCCCcEEEEeC------CeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 003839 169 NRKPFGEVHLKVSSI-RDSKSDDKRFSIFTG------TKRLHLRAETREDRFAWMEALQAVKDMFP 227 (792)
Q Consensus 169 ~~~p~G~I~L~~ssi-~~~~~d~~~F~I~t~------~k~~~L~A~s~~dr~~Wi~aL~~a~~~~~ 227 (792)
...|.....++.|.+ ...+..++.|.|.+- .|||| ++|+++|++|++|||++....+
T Consensus 57 ~p~pLNnF~v~~cq~m~~erPrPntFiiRcLQWTTVIERTF~--ves~~eRq~W~~AIq~vsn~l~ 120 (516)
T KOG0690|consen 57 TPEPLNNFMVRDCQTMKTERPRPNTFIIRCLQWTTVIERTFY--VESAEERQEWIEAIQAVSNRLK 120 (516)
T ss_pred CcccccchhhhhhhhhhccCCCCceEEEEeeeeeeeeeeeee--cCCHHHHHHHHHHHHHHhhhhh
Confidence 123556666666643 445566889988773 36666 7999999999999999976543
No 36
>KOG1090 consensus Predicted dual-specificity phosphatase [General function prediction only]
Probab=99.01 E-value=1.1e-10 Score=136.09 Aligned_cols=94 Identities=30% Similarity=0.460 Sum_probs=75.9
Q ss_pred CCCcceEEEEEeecCCCCCceeeEEEE--eCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccc
Q 003839 90 IVGNGISGVLYKWVNYGKGWRPRWFVL--QDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRL 167 (792)
Q Consensus 90 ~~~~~~~G~L~K~~n~~kgWk~RwFVL--~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~ 167 (792)
....+.+|||+|+|...|+|++||||| ....|+||....+
T Consensus 1631 teNr~~eG~LyKrGA~lK~Wk~RwFVLd~~khqlrYYd~~ed-------------------------------------- 1672 (1732)
T KOG1090|consen 1631 TENRIPEGYLYKRGAKLKLWKPRWFVLDPDKHQLRYYDDFED-------------------------------------- 1672 (1732)
T ss_pred ccccCcccchhhcchhhcccccceeEecCCccceeeeccccc--------------------------------------
Confidence 345566999999999999999999999 5689999996543
Q ss_pred cCCCcceEEEcCc-eEEE---ecCCCCCc-EEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003839 168 LNRKPFGEVHLKV-SSIR---DSKSDDKR-FSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (792)
Q Consensus 168 ~~~~p~G~I~L~~-ssi~---~~~~d~~~-F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~ 223 (792)
.+|+|+|+|.. -++. ....|.+. |.+.|..|+|.|+|.+....++|++.|++|.
T Consensus 1673 --t~pkG~IdLaevesv~~~~~k~vdekgffdlktt~rvynf~a~nin~AqqWve~iqscl 1731 (1732)
T KOG1090|consen 1673 --TKPKGCIDLAEVESVALIGPKTVDEKGFFDLKTTNRVYNFCAQNINLAQQWVECIQSCL 1731 (1732)
T ss_pred --ccccchhhhhhhhhhcccCccccCccceeeeehhhHHHHHHhccchHHHHHHHHHHHhh
Confidence 35889999863 2332 23344454 5699999999999999999999999999985
No 37
>cd00900 PH-like Pleckstrin homology-like domain. Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.
Probab=98.97 E-value=5.6e-09 Score=91.13 Aligned_cols=87 Identities=31% Similarity=0.528 Sum_probs=70.0
Q ss_pred EEEEEeecCCC----CCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCC
Q 003839 96 SGVLYKWVNYG----KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (792)
Q Consensus 96 ~G~L~K~~n~~----kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (792)
+|||.+++... +.|++|||+|.++.|.||+.+....
T Consensus 2 ~g~l~~~~~~~~~~~~~w~~~~~~l~~~~l~~~~~~~~~~---------------------------------------- 41 (99)
T cd00900 2 EGYLLKLGSDDVSKGKRWKRRWFFLFDDGLLLYKSDDKKE---------------------------------------- 41 (99)
T ss_pred ccEEEEeCCCccccccCceeeEEEEECCEEEEEEcCCCCc----------------------------------------
Confidence 69999987654 7899999999999999999764311
Q ss_pred cc-eEEEcCceEEEecCC---CCCcEEEEeC---CeEEEEEcCCHHHHHHHHHHHHHH
Q 003839 172 PF-GEVHLKVSSIRDSKS---DDKRFSIFTG---TKRLHLRAETREDRFAWMEALQAV 222 (792)
Q Consensus 172 p~-G~I~L~~ssi~~~~~---d~~~F~I~t~---~k~~~L~A~s~~dr~~Wi~aL~~a 222 (792)
+. +.++|....+..... .+..|.|.+. .+.++|+|+|.++++.|+.||+.|
T Consensus 42 ~~~~~~~l~~~~v~~~~~~~~~~~~F~i~~~~~~~~~~~~~~~~~~~~~~W~~al~~~ 99 (99)
T cd00900 42 IKPGSIPLSEISVEEDPDGSDDPNCFAIVTKDRGRRVFVFQADSEEEAQEWVEALQQA 99 (99)
T ss_pred CCCCEEEccceEEEECCCCCCCCceEEEECCCCCcEEEEEEcCCHHHHHHHHHHHhcC
Confidence 12 577777766655543 3688999887 789999999999999999999864
No 38
>cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6 Pleckstrin Homology (PH) domain. EFA6 is an guanine nucleotide exchange factor for ARF6, which is involved in membrane recycling. It consists of a SEC7 domain followed by a PH domain. The EFA6 PH domain regulates its association with the plasma membrane. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.96 E-value=5.3e-09 Score=98.48 Aligned_cols=100 Identities=13% Similarity=0.229 Sum_probs=72.1
Q ss_pred eEEEEEee---------cCC-CCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhccccccccc
Q 003839 95 ISGVLYKW---------VNY-GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTS 164 (792)
Q Consensus 95 ~~G~L~K~---------~n~-~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~ 164 (792)
++|+|..+ ... .+.|++||+||.++.|+.||++.......
T Consensus 2 ~~g~l~RK~~~~~~~kk~~~~~R~Wk~~y~vL~g~~L~~yKDe~~~~~~~------------------------------ 51 (117)
T cd01230 2 KHGALMRKVHADPDCRKTPFGKRSWKMFYGILRGLVLYLQKDEHKPGKSL------------------------------ 51 (117)
T ss_pred CCcEEEEEEEecCCCccCCCCCCcceEEEEEEECCEEEEEccCccccccc------------------------------
Confidence 46788653 111 35799999999999999999875311000
Q ss_pred ccccCCCcceEEEcCceEEEecCCC---CCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 003839 165 QRLLNRKPFGEVHLKVSSIRDSKSD---DKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDMFP 227 (792)
Q Consensus 165 ~~~~~~~p~G~I~L~~ssi~~~~~d---~~~F~I~t~~-k~~~L~A~s~~dr~~Wi~aL~~a~~~~~ 227 (792)
........|.|..++..+.... +..|.|.+++ +.|.|+|.|.+|++.||.+|+.|.+.++
T Consensus 52 ---~~~~~~~~Isi~~a~~~ia~dy~Kr~~VF~L~~~~g~~~lfqA~~~ee~~~Wi~~I~~~~~~~s 115 (117)
T cd01230 52 ---SETELKNAISIHHALATRASDYSKKPHVFRLRTADWREFLFQTSSLKELQSWIERINVVAAAFS 115 (117)
T ss_pred ---ccccccceEEeccceeEeeccccCCCcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHhcc
Confidence 0011345788887764433322 6778899875 8999999999999999999999998764
No 39
>PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A.
Probab=98.71 E-value=7.4e-08 Score=88.78 Aligned_cols=92 Identities=22% Similarity=0.172 Sum_probs=67.8
Q ss_pred CCCcceEEEEEeecCCCCCceeeEEEEeCC-eEEEEeecCCCccccchhhcccccccccchhhhhhhccccccccccccc
Q 003839 90 IVGNGISGVLYKWVNYGKGWRPRWFVLQDG-VLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (792)
Q Consensus 90 ~~~~~~~G~L~K~~n~~kgWk~RwFVL~~g-~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~ 168 (792)
.....++|++.|+.+++ +|+|||+|.|+ -|.|+.....
T Consensus 10 ge~Il~~g~v~K~kgl~--~kkR~liLTd~PrL~Yvdp~~~--------------------------------------- 48 (104)
T PF14593_consen 10 GELILKQGYVKKRKGLF--AKKRQLILTDGPRLFYVDPKKM--------------------------------------- 48 (104)
T ss_dssp T--EEEEEEEEEEETTE--EEEEEEEEETTTEEEEEETTTT---------------------------------------
T ss_pred CCeEEEEEEEEEeeceE--EEEEEEEEccCCEEEEEECCCC---------------------------------------
Confidence 56678999999998877 99999999887 8888885332
Q ss_pred CCCcceEEEcCceEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 003839 169 NRKPFGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (792)
Q Consensus 169 ~~~p~G~I~L~~ssi~~~~~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~ 226 (792)
..+|+|++..+. .+...+...|.|.|++|+|+|.. ...+...|+++|+.++..+
T Consensus 49 --~~KGeI~~~~~l-~v~~k~~~~F~I~tp~RtY~l~d-~~~~A~~W~~~I~~~~~~~ 102 (104)
T PF14593_consen 49 --VLKGEIPWSKEL-SVEVKSFKTFFIHTPKRTYYLED-PEGNAQQWVEAIEEVKKQY 102 (104)
T ss_dssp --EEEEEE--STT--EEEECSSSEEEEEETTEEEEEE--TTS-HHHHHHHHHHHHHHH
T ss_pred --eECcEEecCCce-EEEEccCCEEEEECCCcEEEEEC-CCCCHHHHHHHHHHHHHHh
Confidence 136999998553 22234567999999999999987 4566888999999998753
No 40
>cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain. Dynamin pleckstrin homology (PH) domain. Dynamin is a GTPase that regulates endocytic vesicle formation. It has an N-terminal GTPase domain, followed by a PH domain, a GTPase effector domain and a C-terminal proline arginine rich domain. Dynamin-like proteins, which are found in metazoa, plants and yeast have the same domain architecture as dynamin, but lack the PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.65 E-value=1.8e-07 Score=84.00 Aligned_cols=90 Identities=26% Similarity=0.324 Sum_probs=69.9
Q ss_pred cceEEEEEeec-CC-CCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCC
Q 003839 93 NGISGVLYKWV-NY-GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (792)
Q Consensus 93 ~~~~G~L~K~~-n~-~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (792)
++..|||.-.. .. .+|=|.|||||.+.+|+|||...++
T Consensus 1 virkgwl~~~n~~~m~ggsK~~WFVLt~~~L~wykd~eeK---------------------------------------- 40 (110)
T cd01256 1 VIRKGWLSISNVGIMKGGSKDYWFVLTSESLSWYKDDEEK---------------------------------------- 40 (110)
T ss_pred CeeeeeEEeeccceecCCCcceEEEEecceeeeecccccc----------------------------------------
Confidence 46789998762 33 4569999999999999999975431
Q ss_pred CcceEEEcCceEEEecCC----CCCcEEEEeC--------CeEEEEEcCCHHHHHHHHHHHHHH
Q 003839 171 KPFGEVHLKVSSIRDSKS----DDKRFSIFTG--------TKRLHLRAETREDRFAWMEALQAV 222 (792)
Q Consensus 171 ~p~G~I~L~~ssi~~~~~----d~~~F~I~t~--------~k~~~L~A~s~~dr~~Wi~aL~~a 222 (792)
.|+|.|.|..-.++.... ....|.++.+ .|++.|.|+|.+|...|...+-.|
T Consensus 41 E~kyilpLdnLk~Rdve~gf~sk~~~FeLfnpd~rnvykd~k~lel~~~~~e~vdswkasflra 104 (110)
T cd01256 41 EKKYMLPLDGLKLRDIEGGFMSRNHKFALFYPDGRNVYKDYKQLELGCETLEEVDSWKASFLRA 104 (110)
T ss_pred cccceeeccccEEEeecccccCCCcEEEEEcCcccccccchheeeecCCCHHHHHHHHHHHHhc
Confidence 378999999888876543 3566777754 367899999999999998776554
No 41
>cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain. Phafin2 Pleckstrin Homology (PH) domain. Phafin contains a PH domain and a FYVE domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.62 E-value=3.9e-07 Score=84.12 Aligned_cols=94 Identities=22% Similarity=0.206 Sum_probs=74.7
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCcc
Q 003839 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (792)
Q Consensus 94 ~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p~ 173 (792)
+.+|-|.|.. .|+-++|+|.|=+.+|.|-+.-. + .+..+..
T Consensus 5 i~eG~L~K~~--rk~~~~R~ffLFnD~LvY~~~~~-----------------~--------------------~~~~~~~ 45 (104)
T cd01218 5 VGEGVLTKMC--RKKPKQRQFFLFNDILVYGNIVI-----------------S--------------------KKKYNKQ 45 (104)
T ss_pred EecCcEEEee--cCCCceEEEEEecCEEEEEEeec-----------------C--------------------CceeeEe
Confidence 5789999986 67889999999777999965310 0 1122356
Q ss_pred eEEEcCceEEEecCCC---CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 003839 174 GEVHLKVSSIRDSKSD---DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (792)
Q Consensus 174 G~I~L~~ssi~~~~~d---~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~ 226 (792)
+.|+|....|....++ .+.|.|.++.|+|.+.|+|++|+.+||++|+.|++..
T Consensus 46 ~~i~L~~~~v~~~~d~~~~~n~f~I~~~~kSf~v~A~s~~eK~eWl~~i~~ai~~~ 101 (104)
T cd01218 46 HILPLEGVQVESIEDDGIERNGWIIKTPTKSFAVYAATETEKREWMLHINKCVTDL 101 (104)
T ss_pred eEEEccceEEEecCCcccccceEEEecCCeEEEEEcCCHHHHHHHHHHHHHHHHHH
Confidence 8899998887655432 5889999999999999999999999999999999763
No 42
>cd01249 PH_oligophrenin Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin is composed of a PH domain, a rhoGAP domain and a proline rich region. Closely related proteins have a C-terminal SH3 domain. PH domains a share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.42 E-value=9.9e-07 Score=80.91 Aligned_cols=47 Identities=34% Similarity=0.528 Sum_probs=41.3
Q ss_pred EEEcCceEEEecCCCCCcEE--EEeCCe--EEEEEcCCHHHHHHHHHHHHH
Q 003839 175 EVHLKVSSIRDSKSDDKRFS--IFTGTK--RLHLRAETREDRFAWMEALQA 221 (792)
Q Consensus 175 ~I~L~~ssi~~~~~d~~~F~--I~t~~k--~~~L~A~s~~dr~~Wi~aL~~ 221 (792)
.|.|+-|+++..++.++||+ |.+.++ ++.|+|+|.+++..||+|+..
T Consensus 53 ~~~l~sc~~r~~~~~dRRFCFei~~~~~~~~~~lQA~Se~~~~~Wi~A~dg 103 (104)
T cd01249 53 TLTLKSCSRRKTESIDKRFCFDVEVEEKPGVITMQALSEKDRRLWIEAMDG 103 (104)
T ss_pred EEeeeeccccccCCccceeeEeeeecCCCCeEEEEecCHHHHHHHHHhhcC
Confidence 57889999999988899876 777776 899999999999999999864
No 43
>PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A.
Probab=98.39 E-value=1.6e-06 Score=81.91 Aligned_cols=103 Identities=20% Similarity=0.324 Sum_probs=60.1
Q ss_pred eEEEEEeec-----C-----CCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhccccccccc
Q 003839 95 ISGVLYKWV-----N-----YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTS 164 (792)
Q Consensus 95 ~~G~L~K~~-----n-----~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~ 164 (792)
++|||..+. + ..++|+.-|.||++++|+.||.+...... .....
T Consensus 2 keG~l~RK~~~~~~gkk~~~~~R~Wk~~y~vL~g~~L~~~k~~~~~~~~--------------------------~~~~~ 55 (119)
T PF15410_consen 2 KEGILMRKHELESGGKKASRSKRSWKQVYAVLQGGQLYFYKDEKSPASS--------------------------TPPDI 55 (119)
T ss_dssp -EEEEEEEEEEECTTCC---S---EEEEEEEEETTEEEEESSHHHHCCT---------------------------BS--
T ss_pred ceEEEEEEEEEcCCCCCcCCCCCCccEEeEEEECCEEEEEccCcccccC--------------------------Ccccc
Confidence 589998641 1 24579999999999999999974320000 00000
Q ss_pred ccccCCCcceEEEcCceEEEecCC---CCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHH
Q 003839 165 QRLLNRKPFGEVHLKVSSIRDSKS---DDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVK 223 (792)
Q Consensus 165 ~~~~~~~p~G~I~L~~ssi~~~~~---d~~~F~I~t~~-k~~~L~A~s~~dr~~Wi~aL~~a~ 223 (792)
......+|.+.|.|..|......+ .++.|.+.+++ ..|.|+|.|.+|+++||.+|+.+.
T Consensus 56 ~~~~~~~p~~~i~L~~a~a~~a~dY~Kr~~VFrL~~~dg~e~Lfqa~~~~~m~~Wi~~IN~~A 118 (119)
T PF15410_consen 56 QSVENAKPDSSISLHHALAEIASDYTKRKNVFRLRTADGSEYLFQASDEEEMNEWIDAINYAA 118 (119)
T ss_dssp -SS--E-----EE-TT-EEEEETTBTTCSSEEEEE-TTS-EEEEE-SSHHHHHHHHHHHHHH-
T ss_pred cccccCcceeEEEecceEEEeCcccccCCeEEEEEeCCCCEEEEECCCHHHHHHHHHHHhhhc
Confidence 001223567889999887665332 26679999875 789999999999999999999875
No 44
>cd01234 PH_CADPS CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS is a calcium-dependent activator involved in secretion. It contains a central PH domain that binds to phosphoinositide 4,5 bisphosphate containing liposomes. However, membrane association may also be mediated by binding to phosphatidlyserine via general electrostatic interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.33 E-value=1.1e-06 Score=79.69 Aligned_cols=94 Identities=23% Similarity=0.409 Sum_probs=61.3
Q ss_pred eEEEEEeecC-CCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCcc
Q 003839 95 ISGVLYKWVN-YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (792)
Q Consensus 95 ~~G~L~K~~n-~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p~ 173 (792)
.+|||+|.+. ..|.||+|||||. ++ +-|..- |- ++ ..+...|.
T Consensus 4 ~sGyL~k~Gg~~~KkWKKRwFvL~-qv-sQYtfa------mc--------------------------sy--~ekks~P~ 47 (117)
T cd01234 4 HCGYLYAIGKNVWKKWKKRFFVLV-QV-SQYTFA------MC--------------------------SY--REKKAEPT 47 (117)
T ss_pred eeEEEEeccchhhhhhheeEEEEE-ch-hHHHHH------HH--------------------------hh--hhhcCCch
Confidence 7899999986 8899999999998 33 333210 00 00 02233466
Q ss_pred eEEEcCceEEEecCCC--C---------Cc--EEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003839 174 GEVHLKVSSIRDSKSD--D---------KR--FSIFTGTKRLHLRAETREDRFAWMEALQAVKD 224 (792)
Q Consensus 174 G~I~L~~ssi~~~~~d--~---------~~--F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~ 224 (792)
-.|.|.+-+|.-.... + -+ |..+-.+-+..|.++++.||.-||+||-.|..
T Consensus 48 e~~qldGyTvDy~~~~~~~~~~~~~~~gg~~ff~avkegd~~~fa~~de~~r~lwvqa~yratg 111 (117)
T cd01234 48 EFIQLDGYTVDYMPESDPDPNSELSLQGGRHFFNAVKEGDELKFATDDENERHLWVQAMYRATG 111 (117)
T ss_pred hheeecceEEeccCCCCCCcccccccccchhhhheeccCcEEEEeccchHHHHHHHHHHHHHcC
Confidence 7777877776433221 1 11 23333456788899999999999999977753
No 45
>cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK consists of a serine/threonine kinase domain, a cysteine rich (C1) region, a PH domain and a p21 binding motif. It has been shown to promote cytoskeletal reorganization, which affects many biological processes. The MRCK PH domain is responsible for its targeting to cell to cell junctions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.27 E-value=1.1e-05 Score=75.50 Aligned_cols=99 Identities=24% Similarity=0.273 Sum_probs=66.8
Q ss_pred CcceEEEEEe--ecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccC
Q 003839 92 GNGISGVLYK--WVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (792)
Q Consensus 92 ~~~~~G~L~K--~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~ 169 (792)
++.++|||.- .++..+||+++|.||.+..|..|....+..-. . .
T Consensus 1 gt~~EGwvkvP~~~~~krGW~r~~vVv~~~Kl~lYd~e~~k~~~---p-------------------------------~ 46 (122)
T cd01243 1 GTAYEGHVKIPKPGGVKKGWQRALVVVCDFKLFLYDIAEDRASQ---P-------------------------------S 46 (122)
T ss_pred CccceeeEeccCCCCcccCceEEEEEEeCCEEEEEeCCccccCC---c-------------------------------c
Confidence 4578999964 45667899999999999999999976642100 0 0
Q ss_pred CCcceEEEcC--c---eE------EEecCCC-CCcEEEEe-------CCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003839 170 RKPFGEVHLK--V---SS------IRDSKSD-DKRFSIFT-------GTKRLHLRAETREDRFAWMEALQAVKD 224 (792)
Q Consensus 170 ~~p~G~I~L~--~---ss------i~~~~~d-~~~F~I~t-------~~k~~~L~A~s~~dr~~Wi~aL~~a~~ 224 (792)
..|.=.|+|+ . ++ |..++.| ++-|.|.+ +..+.+|-|+|..|++.||.||..-..
T Consensus 47 ~~~~~vLdlrD~~fsV~~VtasDvi~a~~kDiP~If~I~~~~~~~~~~~~~~~~lA~s~~eK~kWV~aL~~l~~ 120 (122)
T cd01243 47 VVISQVLDMRDPEFSVSSVLESDVIHASKKDIPCIFRVTTSQISASSSKCSTLMLADTEEEKSKWVGALSELHK 120 (122)
T ss_pred CceeEEEEcCCCCEEEEEecHHHccccCcccCCeEEEEEEecccCCCCccEEEEEeCCchHHHHHHHHHHHHHh
Confidence 0112223331 1 11 2333444 77788765 347899999999999999999987654
No 46
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.23 E-value=4.3e-07 Score=109.59 Aligned_cols=98 Identities=31% Similarity=0.471 Sum_probs=79.5
Q ss_pred CCcceEEEEEeec-CCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccC
Q 003839 91 VGNGISGVLYKWV-NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (792)
Q Consensus 91 ~~~~~~G~L~K~~-n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~ 169 (792)
.+..+.|||+|++ +..+.|.+|||-.+++.|.|+..-..
T Consensus 272 ~~~~~~~~l~~k~~~~~~tw~r~~f~~q~~~l~~~~r~~~---------------------------------------- 311 (785)
T KOG0521|consen 272 LGYRMEGYLRKKASNASKTWKRRWFSIQDGQLGYQHRGAD---------------------------------------- 311 (785)
T ss_pred chhhhhhhhhhhcccchhhHHhhhhhhhcccccccccccc----------------------------------------
Confidence 4567889999885 56899999999999999999884221
Q ss_pred CCcceEEEcCceEEEecCCC-CC--cEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 003839 170 RKPFGEVHLKVSSIRDSKSD-DK--RFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (792)
Q Consensus 170 ~~p~G~I~L~~ssi~~~~~d-~~--~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~~~ 228 (792)
......++|..|+|+..+.. ++ +|.|++++|+|+|+|+|+.|+++||.+|+..+...-.
T Consensus 312 ~~~~~~~dL~~csvk~~~~~~drr~CF~iiS~tks~~lQAes~~d~~~Wi~~i~nsi~s~l~ 373 (785)
T KOG0521|consen 312 AENVLIEDLRTCSVKPDAEQRDRRFCFEIISPTKSYLLQAESEKDCQDWISALQNSILSALN 373 (785)
T ss_pred ccccccccchhccccCCcccccceeeEEEecCCcceEEecCchhHHHHHHHHHHHHHHHHHh
Confidence 00157788999999987765 44 4669999999999999999999999999999876443
No 47
>cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok is a serine/threonine kinase that binds GTP-rho. It consists of a kinase domain, a coiled coil region and a PH domain. The Rok PH domain is interrupted by a C1 domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.22 E-value=9.1e-06 Score=74.99 Aligned_cols=92 Identities=20% Similarity=0.337 Sum_probs=64.5
Q ss_pred eEEEEEee--cCC--CCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCC
Q 003839 95 ISGVLYKW--VNY--GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (792)
Q Consensus 95 ~~G~L~K~--~n~--~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (792)
++|||.-- ++. .+||+++|.||.+-.|..|..+.+.. ..
T Consensus 2 lEGwlsvP~~~~~~~k~gW~r~yvVv~~~Kl~lYd~e~~~~-------------------------------------~~ 44 (112)
T cd01242 2 MEGWLSLPNRTNKSRKPGWKKQYVVVSSRKILFYNDEQDKE-------------------------------------NS 44 (112)
T ss_pred cceeEEccCCCCccccCCceEEEEEEeCCEEEEEecCcccc-------------------------------------CC
Confidence 68999754 344 36999999999999999999766521 00
Q ss_pred CcceEEEcC----------ceEEEecCCC-CCcEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHH
Q 003839 171 KPFGEVHLK----------VSSIRDSKSD-DKRFSIFTGT--KRLHLRAETREDRFAWMEALQAVK 223 (792)
Q Consensus 171 ~p~G~I~L~----------~ssi~~~~~d-~~~F~I~t~~--k~~~L~A~s~~dr~~Wi~aL~~a~ 223 (792)
.|.-+++|. ...+..++.| ++-|.|..+. ++.+|-|++..|++.||.||..-+
T Consensus 45 ~p~~vldl~~~fhv~~V~asDVi~a~~kDiP~IF~I~~~~~~~~lllLA~s~~ek~kWV~~L~~~~ 110 (112)
T cd01242 45 TPSMILDIDKLFHVRPVTQGDVYRADAKEIPKIFQILYANEARDLLLLAPQTDEQNKWVSRLVKKI 110 (112)
T ss_pred CcEEEEEccceeeeecccHHHeeecCcccCCeEEEEEeCCccceEEEEeCCchHHHHHHHHHHHhc
Confidence 122233332 1123344455 7889887754 889999999999999999997643
No 48
>cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain. Son of Sevenless (SOS) Pleckstrin homology (PH) domain. SOS is a Ras guanine nucleotide exchange factor. It has a RhoGEF (DbH) domain, a PH domain, and a RasGEF domain. The SOS PH domain can bind to inositol 1,4,5-triphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.02 E-value=4.7e-05 Score=71.30 Aligned_cols=102 Identities=20% Similarity=0.269 Sum_probs=74.4
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCcc
Q 003839 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (792)
Q Consensus 94 ~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p~ 173 (792)
+.+|-|.|-+...+.++.|+|-|=|++|-|-|..... .++.|.. .....-+
T Consensus 5 I~EG~L~ki~~~~~~~q~R~~FLFd~~Li~CK~~~~~-----------~~~~g~~------------------~~~y~~k 55 (112)
T cd01261 5 IMEGTLTRVGPSKKAKHERHVFLFDGLMVLCKSNHGQ-----------PRLPGAS------------------SAEYRLK 55 (112)
T ss_pred cccCcEEEEecccCCcceEEEEEecCeEEEEEeccCc-----------ccccccc------------------cceEEEE
Confidence 6789999987545779999999999999999964431 0111110 0122356
Q ss_pred eEEEcCceEEEecCCC---CCcEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003839 174 GEVHLKVSSIRDSKSD---DKRFSIFTG-TKRLHLRAETREDRFAWMEALQAVKD 224 (792)
Q Consensus 174 G~I~L~~ssi~~~~~d---~~~F~I~t~-~k~~~L~A~s~~dr~~Wi~aL~~a~~ 224 (792)
+.|.|....|....+. .+.|.|.+. ++.|.|+|.|++++.+||++|..++.
T Consensus 56 ~~~~l~~~~V~d~~d~~~~knaF~I~~~~~~s~~l~Akt~eeK~~Wm~~l~~~~~ 110 (112)
T cd01261 56 EKFFMRKVDINDKPDSSEYKNAFEIILKDGNSVIFSAKNAEEKNNWMAALISVQT 110 (112)
T ss_pred EEEeeeeeEEEEcCCCcccCceEEEEcCCCCEEEEEECCHHHHHHHHHHHHHHhc
Confidence 7788877666533222 588999985 68899999999999999999998865
No 49
>KOG3640 consensus Actin binding protein Anillin [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]
Probab=97.98 E-value=9.1e-06 Score=96.43 Aligned_cols=99 Identities=20% Similarity=0.442 Sum_probs=74.5
Q ss_pred CCCcceEEEEEee--cCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccc
Q 003839 90 IVGNGISGVLYKW--VNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRL 167 (792)
Q Consensus 90 ~~~~~~~G~L~K~--~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~ 167 (792)
...+..-|+|+-. +.-++-|.+|||+|++|++.|+|...++
T Consensus 987 ~idVEYrGFLtmfed~sgfGaWhRyWc~L~gg~I~fWk~PdDE------------------------------------- 1029 (1116)
T KOG3640|consen 987 AIDVEYRGFLTMFEDGSGFGAWHRYWCALHGGEIKFWKYPDDE------------------------------------- 1029 (1116)
T ss_pred ccceeeeeeeeeeeccCCCchhhhhhHHhcCCeeeeecCcchh-------------------------------------
Confidence 3456677999987 3444569999999999999999976552
Q ss_pred cCCCcceEEEcCceEEEe---cCCC----CCcEEEEe-------------CCe-EEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 168 LNRKPFGEVHLKVSSIRD---SKSD----DKRFSIFT-------------GTK-RLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 168 ~~~~p~G~I~L~~ssi~~---~~~d----~~~F~I~t-------------~~k-~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
+...|.|.|+|..|+-.. ...| ++.|.|.+ --| +..|.|++.++++.|+.+|+.+-..
T Consensus 1030 krK~Pig~IDLt~CTsq~ie~a~rdicar~ntFhie~~rPl~~Dqep~~ie~r~Rv~LaADTkeel~~Wls~iN~tL~~ 1108 (1116)
T KOG3640|consen 1030 KRKVPIGQIDLTKCTSQSIEEARRDICARPNTFHIEVWRPLEDDQEPLLIEKRLRVMLAADTKEELQSWLSAINDTLKQ 1108 (1116)
T ss_pred cccCcceeeehhhhhccccccchhhhccCCceeEEEeecccccccCcchhhhcceeeeecccHHHHHHHHHHHHHHHHH
Confidence 234589999999887432 2222 56788873 123 5789999999999999999998654
No 50
>cd01259 PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip consists of a Ras-associated domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.95 E-value=4.9e-05 Score=70.36 Aligned_cols=100 Identities=18% Similarity=0.212 Sum_probs=61.0
Q ss_pred eEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCcce
Q 003839 95 ISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFG 174 (792)
Q Consensus 95 ~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p~G 174 (792)
++|+|+-+.--.|.||+|||+|+..-|+|+....... .| -|..+.. + ....
T Consensus 2 ~~g~LylK~~gkKsWKk~~f~LR~SGLYy~~Kgksk~----------sr-----dL~cl~~--f------------~~~n 52 (114)
T cd01259 2 MEGPLYLKADGKKSWKKYYFVLRSSGLYYFPKEKTKN----------TR-----DLACLNL--L------------HGHN 52 (114)
T ss_pred ccceEEEccCCCccceEEEEEEeCCeeEEccCCCcCC----------HH-----HHHHHHh--c------------ccCc
Confidence 6899998877779999999999998898887533210 00 0011100 0 0000
Q ss_pred EEEcCceEEEecCCCCCcEEEEeC------Ce-EEEEEcCCHHHHHHHHHHHHHHH
Q 003839 175 EVHLKVSSIRDSKSDDKRFSIFTG------TK-RLHLRAETREDRFAWMEALQAVK 223 (792)
Q Consensus 175 ~I~L~~ssi~~~~~d~~~F~I~t~------~k-~~~L~A~s~~dr~~Wi~aL~~a~ 223 (792)
.-.....--.-....|..|+|..+ .+ .-.|+|++++.+..||.||+-++
T Consensus 53 vY~~~~~kKk~kAPTd~~F~~K~~~~q~~~s~~ik~lCaeDe~t~~~W~ta~Ri~K 108 (114)
T cd01259 53 VYTGLGWRKKYKSPTDYCFGFKAVGDQSKGSQSIKYLCAEDLPTLDRWLTAIRIAK 108 (114)
T ss_pred EEEEechhhccCCCCCceEEEeccccCcccchhheeeccCCHHHHHHHHHHHHHHh
Confidence 000000001112334788888553 22 37899999999999999999886
No 51
>cd01239 PH_PKD Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. PKD consists of 2 C1 domains, followed by a PH domain and a kinase domain. While the PKD PH domain has not been shown to bind phosphorylated inositol lipids and is not required for membrane translocation, it is required for nuclear export. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.88 E-value=7.2e-05 Score=69.57 Aligned_cols=88 Identities=15% Similarity=0.274 Sum_probs=65.3
Q ss_pred eEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCcce
Q 003839 95 ISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFG 174 (792)
Q Consensus 95 ~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p~G 174 (792)
++|||.-.++.-+.|||+|++|+...|++|++.... ++-.
T Consensus 2 kEGWmVHyT~~d~~rKRhYWrLDsK~Itlf~~e~~s----------------------------------------kyyK 41 (117)
T cd01239 2 KEGWMVHYTSSDNRRKKHYWRLDSKAITLYQEESGS----------------------------------------RYYK 41 (117)
T ss_pred ccceEEEEecCccceeeeEEEecCCeEEEEEcCCCC----------------------------------------eeeE
Confidence 689999999999999999999999999999976542 2334
Q ss_pred EEEcCceE-EE-------ecCCCCCcEEEEeCCeEEEEEcC--------------------CHHHHHHHHHHHHHH
Q 003839 175 EVHLKVSS-IR-------DSKSDDKRFSIFTGTKRLHLRAE--------------------TREDRFAWMEALQAV 222 (792)
Q Consensus 175 ~I~L~~ss-i~-------~~~~d~~~F~I~t~~k~~~L~A~--------------------s~~dr~~Wi~aL~~a 222 (792)
+|.|..-. |. .....+..|.|.|.+.+|++.++ ..+..+.|-.||+.|
T Consensus 42 eIPLsEIl~V~~~~~~~~~~~~~~hcFEi~T~~~vY~VG~~~~~~~~~~~~~~~~~~~sg~g~~~a~~We~aI~qA 117 (117)
T cd01239 42 EIPLAEILSVSSNNGDSVLAKHPPHCFEIRTTTNVYFVGGEDYHAFSGGPPKKIPPSDSGRGSDNAQSWETAIRQA 117 (117)
T ss_pred EeehHHheEEeccCCCcCCCCCCCcEEEEEecCEEEEecccccccCCCcccCCCCcccccchhHHHHHHHHHHhcC
Confidence 44443221 21 11245889999999999999764 244568888888864
No 52
>cd01262 PH_PDK1 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. PDK1 contains an N-terminal serine/threonine kinase domain followed by a PH domain. Following binding of the PH domain to PtdIns(3,4,5)P3 and PtdIns(3,4)P2, PDK1 activates kinases such as Akt (PKB). PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.84 E-value=7.1e-05 Score=66.83 Aligned_cols=86 Identities=16% Similarity=0.183 Sum_probs=65.8
Q ss_pred ceEEEEEeecCCCCCceeeEEEEe-CCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCc
Q 003839 94 GISGVLYKWVNYGKGWRPRWFVLQ-DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (792)
Q Consensus 94 ~~~G~L~K~~n~~kgWk~RwFVL~-~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p 172 (792)
...|.+.|+.++ .+|+|=|+|. ...|.|+..... ..
T Consensus 2 l~~g~v~Kr~gl--f~kkR~LiLTd~PrL~yvdp~~~-----------------------------------------~~ 38 (89)
T cd01262 2 LKIGAVKKRKGL--FAKKRQLILTNGPRLIYVDPVKK-----------------------------------------VV 38 (89)
T ss_pred ceeeeeeehhcc--ccceeeEEEecCceEEEEcCCcC-----------------------------------------eE
Confidence 467999999876 4799999994 566777763221 24
Q ss_pred ceEEEcCceEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003839 173 FGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (792)
Q Consensus 173 ~G~I~L~~ssi~~~~~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~ 223 (792)
+|+|.+....+++.......|.|.|++|+|+|. +.....+.|+++|..+.
T Consensus 39 KgeIp~s~~~l~v~~~~~~~F~I~Tp~rty~le-D~~~~a~~W~~~I~~~~ 88 (89)
T cd01262 39 KGEIPWSDVELRVEVKNSSHFFVHTPNKVYSFE-DPKGRASQWKKAIEDLQ 88 (89)
T ss_pred EeEecccccceEEEEecCccEEEECCCceEEEE-CCCCCHHHHHHHHHHHh
Confidence 699999884444444556899999999999994 55688899999998874
No 53
>KOG0248 consensus Cytoplasmic protein Max-1, contains PH, MyTH4 and FERM domains [Cytoskeleton]
Probab=97.82 E-value=9.8e-06 Score=93.25 Aligned_cols=97 Identities=18% Similarity=0.380 Sum_probs=81.8
Q ss_pred cceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCc
Q 003839 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (792)
Q Consensus 93 ~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p 172 (792)
-..+||+.|.+...|.|++||||++.|...||+.+++. ..+|
T Consensus 249 ~ekSgy~~~~~s~~k~lkrr~~v~k~gqi~~y~~~~~~--------------------------------------~~~p 290 (936)
T KOG0248|consen 249 MEKSGYWTQLTSRIKSLKRRYVVFKNGQISFYRKHNNR--------------------------------------DEEP 290 (936)
T ss_pred hhcccchhcchHHHHHHHhHheeeccceEEEEEcCCCc--------------------------------------cccc
Confidence 45789999999889999999999999999999998762 2246
Q ss_pred ceEEEcCceEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 003839 173 FGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (792)
Q Consensus 173 ~G~I~L~~ssi~~~~~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~~ 227 (792)
.|.|++..-.+.+..+....|..++.+++|+|-++|.---.+|+..|++++....
T Consensus 291 ~s~~d~~s~~~~~~~~~s~~fqli~~t~~~~~~~~s~~lt~dw~~iL~~~iKv~~ 345 (936)
T KOG0248|consen 291 ASKIDIRSVTKLEQQGAAYAFQLITSTDKMNFMTESERTTHDWVTILSAAIKATT 345 (936)
T ss_pred cCcccccccceeeccchhHHhhhhhhceeEEEeccChhhhhhhHHHHHHHHHHHh
Confidence 6777777666666666678899999999999999999999999999999876543
No 54
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=97.49 E-value=0.00023 Score=82.45 Aligned_cols=98 Identities=20% Similarity=0.351 Sum_probs=62.8
Q ss_pred CcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCC
Q 003839 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (792)
Q Consensus 92 ~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (792)
.....|||.|.+...+ |++|||.|.+|.++.....++.+-.. ..+
T Consensus 376 Dv~~~G~l~k~~~~~~-wk~ry~~l~~~~l~~~~~~~~~~~~~----------------------------------~~~ 420 (478)
T PTZ00267 376 DVTHGGYLYKYSSDMR-WKKRYFYIGNGQLRISLSENPENDGV----------------------------------APK 420 (478)
T ss_pred CcccceEEeccCCCcc-hhhheEEecCCceEEEeccccccCCC----------------------------------CCc
Confidence 4577999999988776 99999999877777665433321000 000
Q ss_pred cceEEEcCceE-EEe--cCCCCCcEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003839 172 PFGEVHLKVSS-IRD--SKSDDKRFSIFT-GTKRLHLRAETREDRFAWMEALQAVKD 224 (792)
Q Consensus 172 p~G~I~L~~ss-i~~--~~~d~~~F~I~t-~~k~~~L~A~s~~dr~~Wi~aL~~a~~ 224 (792)
+.....+..+. +.. ....+..|.|.+ ..+++.+.|+|.++|..||.+||.|..
T Consensus 421 ~~~l~~~~~v~pv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 477 (478)
T PTZ00267 421 SVNLETVNDVFPVPEVYSQKHPNQLVLWFNNGQKIIAYAKTAEDRDQWISKFQRACG 477 (478)
T ss_pred cccHHHhcccccccHHhcCCCCceEEEEecCCcEEEEecCChHHHHHHHHHHHHHhC
Confidence 11111122111 111 123467787755 567888889999999999999999853
No 55
>KOG3723 consensus PH domain protein Melted [Signal transduction mechanisms]
Probab=97.46 E-value=7.7e-05 Score=84.65 Aligned_cols=110 Identities=25% Similarity=0.325 Sum_probs=73.6
Q ss_pred ccCCCCcceEEEEEe-ec--CCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccc
Q 003839 87 INDIVGNGISGVLYK-WV--NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETT 163 (792)
Q Consensus 87 ~~~~~~~~~~G~L~K-~~--n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~ 163 (792)
+++..++.++|-|.- +| .++|.|+.|||.|.+..|.|-|.+.++... + --|+-..+|-++ .
T Consensus 729 vn~~gqp~iEGQLKEKKGrWRf~kRW~TrYFTLSgA~L~~~kg~s~~dS~---~-----~~IDl~~IRSVk---~----- 792 (851)
T KOG3723|consen 729 VNQDGQPLIEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKSKDDSD---D-----CPIDLSKIRSVK---A----- 792 (851)
T ss_pred ecCCCCchhcchhhhhccchhhhhhhccceEEecchhhhcccCCCCCCCC---C-----CCccHHHhhhHH---H-----
Confidence 455567799999973 33 478999999999999999998865542100 0 001100000000 0
Q ss_pred cccccCCCcceEEEcCceEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 003839 164 SQRLLNRKPFGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (792)
Q Consensus 164 ~~~~~~~~p~G~I~L~~ssi~~~~~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~~~ 228 (792)
++.-+..++-++-|.|+|.++||.|+|.+.+..++|++.|+-|.+...+
T Consensus 793 ----------------v~~kr~~rslpKAFEIFTAD~T~ILKaKDeKNAEEWlqCL~IavAHa~~ 841 (851)
T KOG3723|consen 793 ----------------VAKKRRDRSLPKAFEIFTADKTYILKAKDEKNAEEWLQCLNIAVAHAKE 841 (851)
T ss_pred ----------------HHhhhhhcccchhhheeecCceEEeecccccCHHHHHHHHHHHHHHHHH
Confidence 0000112334778999999999999999999999999999999876443
No 56
>PLN00188 enhanced disease resistance protein (EDR2); Provisional
Probab=97.41 E-value=0.00068 Score=80.34 Aligned_cols=97 Identities=18% Similarity=0.302 Sum_probs=63.9
Q ss_pred CcceEEEEEeec-CCCC--CceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhccccccccccccc
Q 003839 92 GNGISGVLYKWV-NYGK--GWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (792)
Q Consensus 92 ~~~~~G~L~K~~-n~~k--gWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~ 168 (792)
.+.++|||+-.+ |.++ --++|||||++..|.|||.+..++ .
T Consensus 3 ~~~~eGW~y~~g~~kig~~~~~~Ry~vl~~~~~~~yK~~P~~~-~----------------------------------- 46 (719)
T PLN00188 3 KVVYEGWMVRYGRRKIGRSYIHMRYFVLESRLLAYYKKKPQDN-Q----------------------------------- 46 (719)
T ss_pred cceEeeEEEEEcccccccccceeEEEEEecchhhhcccCCccc-c-----------------------------------
Confidence 356999999985 3322 278999999999999999865432 1
Q ss_pred CCCcceEEEcCceEEEecCC----CCCcEE---EEe---CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 003839 169 NRKPFGEVHLKVSSIRDSKS----DDKRFS---IFT---GTKRLHLRAETREDRFAWMEALQAVKDMF 226 (792)
Q Consensus 169 ~~~p~G~I~L~~ssi~~~~~----d~~~F~---I~t---~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~ 226 (792)
.|..+.-+.++.-.++.. ..+.|+ |+. .++...|-|.|.+|...||+||+.|++..
T Consensus 47 --~pirs~~id~~~rVed~Gr~~~~g~~~yvl~~Yn~~~~~~~~~~~a~~~eea~~W~~a~~~a~~q~ 112 (719)
T PLN00188 47 --VPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYNKKEKYHRITMAAFNIQEALIWKEKIESVIDQH 112 (719)
T ss_pred --ccceeeccCCCceEeecCceEEcCceEEEEEEecCCCccccEEEecCCHHHHHHHHHHHHHHHhhh
Confidence 122222222222111111 123344 333 35779999999999999999999999864
No 57
>cd01258 PH_syntrophin Syntrophin pleckstrin homology (PH) domain. Syntrophin pleckstrin homology (PH) domain. Syntrophins are peripheral membrane proteins, which associate with the Duchenne muscular dystrophy protein dystrophin and other proteins to form the dystrophin glycoprotein complex (DGC). There are five syntrophin isoforms, alpha1, beta1, beta2, gamma1, and gamma2. They all contain two PH domains, with the N-teminal PH domain interupted by a PDZ domain. The N-terminal PH domain of alpha1syntrophin binds phosphatidylinositol 4,5-bisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.36 E-value=0.00053 Score=63.76 Aligned_cols=99 Identities=24% Similarity=0.296 Sum_probs=60.2
Q ss_pred EEEEeecC----CCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCc
Q 003839 97 GVLYKWVN----YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (792)
Q Consensus 97 G~L~K~~n----~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p 172 (792)
|||..+.. ..+.||+||++|.++-|..|+...-.+-.-+.+ +..-.|+. ..
T Consensus 3 GW~~E~~~~~~~~~~~wrP~F~aL~~~dl~ly~s~P~s~e~w~~p-~~~y~L~~------------------------~a 57 (108)
T cd01258 3 GWVNEQLSGDDESSQRWRPRFLALKGSEFLFFETPPLSVEDWSRP-LYVYKLYD------------------------VA 57 (108)
T ss_pred eecccccCCCCccccccceEEEEEcCCcEEEEeCCCCCHHHHhCh-hhhChhHH------------------------hh
Confidence 88888743 348899999999999999999755321111000 00000000 00
Q ss_pred ceEEEcCceEEEecCCCCCcEEEEeCCe--EEEEEcCCHHHHHHHHHHHHH
Q 003839 173 FGEVHLKVSSIRDSKSDDKRFSIFTGTK--RLHLRAETREDRFAWMEALQA 221 (792)
Q Consensus 173 ~G~I~L~~ssi~~~~~d~~~F~I~t~~k--~~~L~A~s~~dr~~Wi~aL~~ 221 (792)
...++..... ......+..|.|.++++ +.+|+.|+..|+..|..||+.
T Consensus 58 trvv~~~~~~-~~~~~~~~~F~irtg~~vesh~fsVEt~~dL~~W~raiv~ 107 (108)
T cd01258 58 TRLVKNSSTR-RLNDQRDNCFLIRTGTQVENHYLRVETHRDLASWERALVR 107 (108)
T ss_pred hheeccCCcc-CcCCCCceEEEEEcCCceeeEEEEecCHHHHHHHHHHHhc
Confidence 0011110000 00124467899999984 699999999999999999974
No 58
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=97.29 E-value=0.0001 Score=83.94 Aligned_cols=38 Identities=34% Similarity=0.539 Sum_probs=33.0
Q ss_pred CCCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 188 SDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 188 ~d~~~F~I~t~~-k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
+.+..|.|++.+ .++||.|.+.+||.+||+||+..+..
T Consensus 443 EEde~F~IVs~tgqtWhFeAtt~EERdaWvQai~sqIla 481 (749)
T KOG0705|consen 443 EEDECFEIVSNTGQTWHFEATTYEERDAWVQAIQSQILA 481 (749)
T ss_pred cccceEEEeccccchhhhhhcchhhHHHHHHHHHHHHHH
Confidence 346689998876 68999999999999999999998764
No 59
>PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis. During prophase I of fission yeast all the telomeres become bundled at the spindle pole body and subsequently the nucleus undergoes a dynamic oscillation, resulting in elongated nuclear morphology known as "horsetail" nucleus. The pleckstrin homology domain is necessary for the cortical localisation of the Mcp5 protein during meiosis [].; GO: 0005515 protein binding, 0032065 cortical protein anchoring, 0005938 cell cortex
Probab=97.28 E-value=0.0018 Score=61.64 Aligned_cols=33 Identities=33% Similarity=0.479 Sum_probs=29.1
Q ss_pred CcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003839 191 KRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (792)
Q Consensus 191 ~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~ 223 (792)
+.|.|.++.|++.|-|.|.++.+.|+.||+.-.
T Consensus 89 ~si~i~t~~R~L~l~a~s~~~~~~W~~aL~~L~ 121 (123)
T PF12814_consen 89 KSIIIVTPDRSLDLTAPSRERHEIWFNALRYLL 121 (123)
T ss_pred eEEEEEcCCeEEEEEeCCHHHHHHHHHHHHHHh
Confidence 456688999999999999999999999998754
No 60
>KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms]
Probab=97.25 E-value=0.0006 Score=79.59 Aligned_cols=97 Identities=22% Similarity=0.332 Sum_probs=70.0
Q ss_pred CCcceEEEEE-eecC----CC-CCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhccccccccc
Q 003839 91 VGNGISGVLY-KWVN----YG-KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTS 164 (792)
Q Consensus 91 ~~~~~~G~L~-K~~n----~~-kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~ 164 (792)
.++.++|.|. |+.. .+ +..|+|||-|....|+|-|+.+.
T Consensus 562 ~p~v~k~glm~kr~~gr~~~~~~~FKKryf~LT~~~Ls~~Ksp~~----------------------------------- 606 (800)
T KOG2059|consen 562 EPVVLKEGLMIKRAQGRGRFGKKNFKKRYFRLTTEELSYAKSPGK----------------------------------- 606 (800)
T ss_pred CCceecccceEeccccccchhhhhhhheEEEeccceeEEecCCcc-----------------------------------
Confidence 3455555554 4432 22 45889999999999999997654
Q ss_pred ccccCCCcceEEEcCceE----EEec-CCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 003839 165 QRLLNRKPFGEVHLKVSS----IRDS-KSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (792)
Q Consensus 165 ~~~~~~~p~G~I~L~~ss----i~~~-~~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~~~ 228 (792)
+|.+.|.|...- +.+. -...+.|.|++.+|+++|+|.+-.|..+|+.||..+..+-+.
T Consensus 607 ------q~~~~Ipl~nI~avEklee~sF~~knv~qVV~~drtly~Q~~n~vEandWldaL~kvs~~N~~ 669 (800)
T KOG2059|consen 607 ------QPIYTIPLSNIRAVEKLEEKSFKMKNVFQVVHTDRTLYVQAKNCVEANDWLDALRKVSCCNQN 669 (800)
T ss_pred ------CcccceeHHHHHHHHHhhhhccCCCceEEEEecCcceeEecCCchHHHHHHHHHHHHhccCcc
Confidence 366777775322 1111 123678999999999999999999999999999998765444
No 61
>PLN02866 phospholipase D
Probab=97.18 E-value=0.0021 Score=78.99 Aligned_cols=112 Identities=17% Similarity=0.227 Sum_probs=72.5
Q ss_pred CCcceEEEEEeec-----C------C---------CCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchh
Q 003839 91 VGNGISGVLYKWV-----N------Y---------GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEEST 150 (792)
Q Consensus 91 ~~~~~~G~L~K~~-----n------~---------~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~ 150 (792)
.+-.+|||++|+. . . ...|++|||||+++.|.|.+..-+.++. .+-|+...
T Consensus 180 g~K~~Eg~v~~r~~~~~~g~~~~~~~~~~~~~~~~~~~w~k~w~v~k~~~l~~~~~p~~~~~~-------~v~lfD~~-- 250 (1068)
T PLN02866 180 GPKLKEGYVMVKHLPKIPKSDDSRGCFPCCCFSCCNDNWQKVWAVLKPGFLALLEDPFDAKPL-------DIIVFDVL-- 250 (1068)
T ss_pred CCCcceeEEEEeccCCCCCCCccCCccccccCCeecCchheeEEEEeccEEEEEecCCCCcee-------EEEEEecc--
Confidence 4567899999982 1 0 1359999999999999999765543322 11111110
Q ss_pred hhhhhcccccccccccccCCCcceEEEcCceEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 003839 151 RIISKRKHKKETTSQRLLNRKPFGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (792)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~p~G~I~L~~ssi~~~~~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~~ 227 (792)
.. -..+-.|.|.|..-. .+...-...|.|.+++|++.|+|.|......|+.+|+.+....+
T Consensus 251 -------~~--------~~~~~~~~~~~~~~~-k~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~ai~~~~~~~~ 311 (1068)
T PLN02866 251 -------PA--------SNGNGEGQISLAKEI-KERNPLRFGFKVTCGNRSIRLRTKSSAKVKDWVAAINDAGLRPP 311 (1068)
T ss_pred -------cc--------cccCCCcceeecccc-cccCCCcceEEEecCceEEEEEECCHHHHHHHHHHHHHHHhccC
Confidence 00 001112444443221 22223356788999999999999999999999999999985544
No 62
>cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg contains a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=97.13 E-value=0.0055 Score=56.12 Aligned_cols=87 Identities=20% Similarity=0.224 Sum_probs=63.9
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCcc
Q 003839 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (792)
Q Consensus 94 ~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p~ 173 (792)
.++|.|.-+.. =+.|+.-|=+.+|-|-|..++ + ..-+
T Consensus 5 lleg~l~~~~~----~~eR~vFLFe~~ll~~K~~~~-~--------------------------------------y~~K 41 (97)
T cd01222 5 LLEGRFREHGG----GKPRLLFLFQTMLLIAKPRGD-K--------------------------------------YQFK 41 (97)
T ss_pred eeeceEEeecC----CCceEEEEecccEEEEEecCC-e--------------------------------------eEEE
Confidence 56788874443 356988888889999886543 1 1234
Q ss_pred eEEEcCceEEEecC-CCCCcEEEEeCC---eEEEEEcCCHHHHHHHHHHHHHHH
Q 003839 174 GEVHLKVSSIRDSK-SDDKRFSIFTGT---KRLHLRAETREDRFAWMEALQAVK 223 (792)
Q Consensus 174 G~I~L~~ssi~~~~-~d~~~F~I~t~~---k~~~L~A~s~~dr~~Wi~aL~~a~ 223 (792)
..|.+..-.|.++. .|+++|.|.+.. ++|.|+|.|.+++..||++|+.+.
T Consensus 42 ~~i~~~~l~i~e~~~~d~~~F~v~~~~~p~~~~~l~A~s~e~K~~W~~~i~~~i 95 (97)
T cd01222 42 AYIPCKNLMLVEHLPGEPLCFRVIPFDDPKGALQLTARNREEKRIWTQQLKRAM 95 (97)
T ss_pred EEEEecceEEecCCCCCCcEEEEEecCCCceEEEEEecCHHHHHHHHHHHHHHh
Confidence 56666655565543 358999996643 689999999999999999999875
No 63
>cd01224 PH_Collybistin Collybistin pleckstrin homology (PH) domain. Collybistin pleckstrin homology (PH) domain. Collybistin is GEF which induces submembrane clustering of the receptor-associated peripheral membrane protein gephyrin. It consists of an SH3 domain, followed by a RhoGEF(dbH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=96.87 E-value=0.013 Score=54.56 Aligned_cols=93 Identities=15% Similarity=0.247 Sum_probs=66.7
Q ss_pred ceEEEEEeecCCCCCc-eeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCc
Q 003839 94 GISGVLYKWVNYGKGW-RPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (792)
Q Consensus 94 ~~~G~L~K~~n~~kgW-k~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p 172 (792)
+.+|-|.+.+. .+|| +.|.|-|=|++|.|.|...-. .....-
T Consensus 3 i~~Gel~~~s~-~~g~~q~R~~FLFD~~LI~CKkd~~r------------------------------------~~~~~y 45 (109)
T cd01224 3 FLQGEATRQKQ-NKGWNSSRVLFLFDHQMVLCKKDLIR------------------------------------RDHLYY 45 (109)
T ss_pred eEeeeEEEEec-ccCCcccEEEEEecceEEEEeccccc------------------------------------CCcEEE
Confidence 57888988763 2444 469999999999999942110 011235
Q ss_pred ceEEEcCceEEEecCCC---------CCcEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHH
Q 003839 173 FGEVHLKVSSIRDSKSD---------DKRFSIFTGT--KRLHLRAETREDRFAWMEALQAVK 223 (792)
Q Consensus 173 ~G~I~L~~ssi~~~~~d---------~~~F~I~t~~--k~~~L~A~s~~dr~~Wi~aL~~a~ 223 (792)
+|.|.|..+.|....+. .+.|.|+..+ +.|.|.|.|+++.+.||+||..-+
T Consensus 46 Kgri~l~~~~I~d~~Dg~~~~~~~~~knafkl~~~~~~~~~~f~~Kt~e~K~~Wm~a~~~er 107 (109)
T cd01224 46 KGRIDLDRCEVVNIRDGKMFSSGHTIKNSLKIYSESTDEWYLFSFKSAERKHRWLSAFALER 107 (109)
T ss_pred EEEEEcccEEEEECCCCccccCCceeEEEEEEEEcCCCeEEEEEECCHHHHHHHHHHHHHhh
Confidence 79999998887654322 3457777654 679999999999999999997644
No 64
>KOG3751 consensus Growth factor receptor-bound proteins (GRB7, GRB10, GRB14) [Signal transduction mechanisms]
Probab=96.87 E-value=0.0036 Score=71.20 Aligned_cols=108 Identities=20% Similarity=0.270 Sum_probs=66.8
Q ss_pred cCCCCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccc
Q 003839 88 NDIVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRL 167 (792)
Q Consensus 88 ~~~~~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~ 167 (792)
+..+.+.++|+||-+.--.|+||+-||||+..-|||+.+...+. + + -|..|. ++..+.
T Consensus 312 ~s~~~pei~GfL~~K~dgkKsWKk~yf~LR~SGLYys~K~tsk~------~-r--------~Lq~l~--~~~~sn----- 369 (622)
T KOG3751|consen 312 SSSSPPEIQGFLYLKEDGKKSWKKHYFVLRRSGLYYSTKGTSKE------P-R--------HLQCLA--DLHSSN----- 369 (622)
T ss_pred hcCCCccccceeeecccccccceeEEEEEecCcceEccCCCCCC------c-h--------hhHHHH--hcccCc-----
Confidence 34467899999999988889999999999999999987533210 0 0 011111 000000
Q ss_pred cCCCcceEEEcCceEEEecCCCCCcEEEEeC-----CeE-EEEEcCCHHHHHHHHHHHHHHHH
Q 003839 168 LNRKPFGEVHLKVSSIRDSKSDDKRFSIFTG-----TKR-LHLRAETREDRFAWMEALQAVKD 224 (792)
Q Consensus 168 ~~~~p~G~I~L~~ssi~~~~~d~~~F~I~t~-----~k~-~~L~A~s~~dr~~Wi~aL~~a~~ 224 (792)
.....+-.-.-....|..|+|... .|- =+|+|++...|..|+.||+-+|-
T Consensus 370 -------VYt~i~~rKkyksPTd~~f~~K~~~~~~~~r~lk~lCAEDe~t~~~WltAiRl~Ky 425 (622)
T KOG3751|consen 370 -------VYTGIGGRKKYKSPTDYGFCIKPNKLRNKRRFLKMLCAEDEQTRTCWLTAIRLLKY 425 (622)
T ss_pred -------eEEeecchhccCCCCCceEEeeeccccCcccceeeeecccchhHHHHHHHHHHHHH
Confidence 000000000011233788888652 232 57999999999999999999864
No 65
>KOG1451 consensus Oligophrenin-1 and related Rho GTPase-activating proteins [Signal transduction mechanisms]
Probab=96.68 E-value=0.0029 Score=72.60 Aligned_cols=103 Identities=22% Similarity=0.330 Sum_probs=71.9
Q ss_pred CCCcceEEEEEee--cCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccc
Q 003839 90 IVGNGISGVLYKW--VNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRL 167 (792)
Q Consensus 90 ~~~~~~~G~L~K~--~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~ 167 (792)
..+.+++||||-+ ..+++.|-+-|||.+...-.+ .|-+..++. .
T Consensus 262 p~p~t~eGYlY~QEK~~~g~sWvKyYC~Y~retk~~---------TMvp~~qk~-------------------------g 307 (812)
T KOG1451|consen 262 PTPSTKEGYLYMQEKSKIGKSWVKYYCVYSRETKIF---------TMVPANQKT-------------------------G 307 (812)
T ss_pred CCCcccceeeeehhhhhccchhhhheeEeecccceE---------EEeecccCC-------------------------C
Confidence 3578999999986 578899999999984432111 111110000 0
Q ss_pred cCCCcceEEEcCceEEEecCCCCCcEE--EEeCC--eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 003839 168 LNRKPFGEVHLKVSSIRDSKSDDKRFS--IFTGT--KRLHLRAETREDRFAWMEALQAVKDMF 226 (792)
Q Consensus 168 ~~~~p~G~I~L~~ssi~~~~~d~~~F~--I~t~~--k~~~L~A~s~~dr~~Wi~aL~~a~~~~ 226 (792)
....+..++.|+.|+-+..++-++||| |.+.. .+..++|=|++||..||+|+..+.-.+
T Consensus 308 ~k~g~~~~~~lKsC~RRktdSIdKRFCFDve~~erpgviTmQALSE~drrlWmeAMDG~ep~Y 370 (812)
T KOG1451|consen 308 TKMGQTATFKLKSCSRRKTDSIDKRFCFDVEVEERPGVITMQALSEKDRRLWMEAMDGAEPSY 370 (812)
T ss_pred CcCCCcceEEehhhccCcccccccceeeeeeecccCCeeehHhhhhhHHHHHHHHhcCCCccc
Confidence 011245678899999888788889887 55555 479999999999999999998884443
No 66
>KOG3531 consensus Rho guanine nucleotide exchange factor CDEP [Signal transduction mechanisms]
Probab=96.47 E-value=0.00087 Score=79.36 Aligned_cols=95 Identities=24% Similarity=0.388 Sum_probs=70.4
Q ss_pred CcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCC
Q 003839 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (792)
Q Consensus 92 ~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (792)
-..++|||...-..-.||++=|.|..+-+|++||++.+.-
T Consensus 923 e~qLsg~LlrkfknssgwqkLwvvft~fcl~fyKS~qD~~---------------------------------------- 962 (1036)
T KOG3531|consen 923 ENQLSGYLLRKFKNSSGWQKLWVVFTNFCLFFYKSHQDSE---------------------------------------- 962 (1036)
T ss_pred HhhhhHHHHHHhhccccceeeeeeecceeeEeeccccccc----------------------------------------
Confidence 4578999987654456999999999999999999988731
Q ss_pred cceEEEcCceEEEecC-C----CCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 003839 172 PFGEVHLKVSSIRDSK-S----DDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (792)
Q Consensus 172 p~G~I~L~~ssi~~~~-~----d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~ 226 (792)
|..++.|.+-++..-. . .+..|.+.-..-+|++||++.-...+||+.|+.+-...
T Consensus 963 ~laslPlLgysvs~P~~~d~i~K~~vfkl~fk~hvyffraes~yt~~rw~evi~~a~~s~ 1022 (1036)
T KOG3531|consen 963 PLASLPLLGYSVSIPAEPDPIQKDYVFKLKFKSHVYFFRAESYYTFERWMEVITDAPSSA 1022 (1036)
T ss_pred ccccccccccccCCCCCCCCcchhheeeeehhhhHHHHhhhhhhhhhhHHHHhhcCCccC
Confidence 3344445554443221 1 15566776677889999999999999999999886543
No 67
>PF15406 PH_6: Pleckstrin homology domain
Probab=96.42 E-value=0.0076 Score=55.69 Aligned_cols=50 Identities=22% Similarity=0.377 Sum_probs=40.7
Q ss_pred CcceEEEcCceEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHH
Q 003839 171 KPFGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQA 221 (792)
Q Consensus 171 ~p~G~I~L~~ssi~~~~~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~ 221 (792)
.|.|.|+|..++- +..+.+..|.+...+....|+|.|..||..||.+|..
T Consensus 62 ~P~GiinLadase-~~~~g~~kF~f~~~G~khtF~A~s~aERD~Wv~~lk~ 111 (112)
T PF15406_consen 62 SPSGIINLADASE-PEKDGSNKFHFKIKGHKHTFEAASAAERDNWVAQLKA 111 (112)
T ss_pred CCcceEehhhccc-cccCCCceEEEEeCCceeeeecCCHHHhccHHHHhhc
Confidence 4889999976652 2234468898888889999999999999999999864
No 68
>PF15404 PH_4: Pleckstrin homology domain
Probab=96.26 E-value=0.022 Score=57.98 Aligned_cols=32 Identities=25% Similarity=0.467 Sum_probs=29.6
Q ss_pred eEEEEEeecCCCCCceeeEEEEeCCeEEEEee
Q 003839 95 ISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKI 126 (792)
Q Consensus 95 ~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~ 126 (792)
++|+|+.+.+....++++|+||-.|.|.-|..
T Consensus 1 ~sG~LY~K~~khs~F~~~~vvL~~G~Li~f~~ 32 (185)
T PF15404_consen 1 MSGYLYQKPRKHSTFKKYFVVLIPGFLILFQL 32 (185)
T ss_pred CCceeeecCCCCCCceEEEEEEeCCEEEEEEE
Confidence 47999999988899999999999999999887
No 69
>cd01221 PH_ephexin Ephexin Pleckstrin homology (PH) domain. Ephexin Pleckstrin homology (PH) domain. Ephexin contains a RhoGEF (DH) followed by a PH domain and an SH3 domain. The ephexin PH domain is believed to act with the DH domain in mediating protein-protein interactions with the Eph receptor. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=96.05 E-value=0.042 Score=52.58 Aligned_cols=79 Identities=19% Similarity=0.235 Sum_probs=51.1
Q ss_pred ceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCcceEEEcCceEEEe---
Q 003839 109 WRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFGEVHLKVSSIRD--- 185 (792)
Q Consensus 109 Wk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p~G~I~L~~ssi~~--- 185 (792)
-++||+-|=+++|-|-|.+...+..+- ..-|++.|.+.......
T Consensus 27 ~~~vylfLFnDlLl~tkkK~~~~f~V~---------------------------------dy~~r~~l~V~~~e~~~~~~ 73 (125)
T cd01221 27 ARTIYLFLFNDLLLITKKKLGSTFVVF---------------------------------DYAPRSFLRVEKIEPDNQKI 73 (125)
T ss_pred CCcEEEEEecceEEEEEecCCCeEEEE---------------------------------eeccccceEEeecccccccc
Confidence 457899999999999987765544431 11234444443221110
Q ss_pred -----cCCCCCcEEEE-----eC-CeEEEEEcCCHHHHHHHHHHHH
Q 003839 186 -----SKSDDKRFSIF-----TG-TKRLHLRAETREDRFAWMEALQ 220 (792)
Q Consensus 186 -----~~~d~~~F~I~-----t~-~k~~~L~A~s~~dr~~Wi~aL~ 220 (792)
+....+.|.|. .| +..+.|+|+|+.||++||+||.
T Consensus 74 ~~~~~~~~~~~~F~ltLl~N~~gk~~el~L~a~S~sdr~rWi~Al~ 119 (125)
T cd01221 74 PLGSNLVGRPNLFLLTLLRNADDKQAELLLSADSQSDRERWLSALA 119 (125)
T ss_pred cccccccCCCceEEEEeeccCCCCEEEEEEECCCHHHHHHHHHhcC
Confidence 11236778874 12 3569999999999999999984
No 70
>KOG1117 consensus Rho- and Arf-GTPase activating protein ARAP3 [Signal transduction mechanisms; Cytoskeleton]
Probab=95.90 E-value=0.031 Score=66.88 Aligned_cols=92 Identities=23% Similarity=0.374 Sum_probs=65.0
Q ss_pred CCcceEEEEEeecCCCC----------CceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhccccc
Q 003839 91 VGNGISGVLYKWVNYGK----------GWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKK 160 (792)
Q Consensus 91 ~~~~~~G~L~K~~n~~k----------gWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~ 160 (792)
..+...|+||+.-...+ --.++|+||.+|.|+||.+...+
T Consensus 490 ~s~~~~~fLyc~~sa~~kl~~drr~~Ee~nr~wcVlg~g~ls~fen~~S~------------------------------ 539 (1186)
T KOG1117|consen 490 QSTFLCGFLYCAPSAASKLSSDRRLREETNRKWCVLGGGFLSYFENEKST------------------------------ 539 (1186)
T ss_pred ccccccceeeechhhccCCCChhhhcccCCCceEEcCcchhhhhhhcCCC------------------------------
Confidence 45567899998743321 24578999999999999975431
Q ss_pred ccccccccCCCcceEEEcCce-EEEecCCCC-------CcEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHH
Q 003839 161 ETTSQRLLNRKPFGEVHLKVS-SIRDSKSDD-------KRFSIFT-GTKRLHLRAETREDRFAWMEALQAV 222 (792)
Q Consensus 161 ~~~~~~~~~~~p~G~I~L~~s-si~~~~~d~-------~~F~I~t-~~k~~~L~A~s~~dr~~Wi~aL~~a 222 (792)
.|-|.|++..- .+.++..+. ..|.|.. ++|.|++-++++++...|..|+-..
T Consensus 540 ----------tP~~lI~~~Eivclav~~pd~~pn~~~~f~fE~~l~~er~~~fgle~ad~l~~wt~aiaKh 600 (1186)
T KOG1117|consen 540 ----------TPNGLININEIVCLAVHPPDTYPNTGFIFIFEIYLPGERVFLFGLETADALRKWTEAIAKH 600 (1186)
T ss_pred ----------CCCceeeccceEEEeecCCCCCCCcCceeEEEEeecccceEEeecccHHHHHHHHHHHHHh
Confidence 37788888532 233444442 2355655 5689999999999999999998543
No 71
>KOG0932 consensus Guanine nucleotide exchange factor EFA6 [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.63 E-value=0.0065 Score=69.54 Aligned_cols=117 Identities=20% Similarity=0.276 Sum_probs=76.6
Q ss_pred CCCccccccCCCCcceEEEEEeecC---------C-CCCceeeEEEEeCCeEEEEeecCCC-ccccchhhcccccccccc
Q 003839 80 AEPVDVKINDIVGNGISGVLYKWVN---------Y-GKGWRPRWFVLQDGVLSYYKIHGPD-KIIVSEETERGCKVIGEE 148 (792)
Q Consensus 80 ~~~~~~~~~~~~~~~~~G~L~K~~n---------~-~kgWk~RwFVL~~g~L~YYk~~~~~-~i~~~~~~~~~~~vig~~ 148 (792)
.+-.++.....+.+.+.|+|..+.. . .+|||.=|-||++-+||+-|.+-.. +.....+.+.
T Consensus 493 ~pfldv~~dpsa~~Yk~G~L~RK~had~DgkKTPrGkRgWk~fya~LkG~vLYlqkDey~p~kalse~~lkn-------- 564 (774)
T KOG0932|consen 493 NPFLDVPPDPSAATYKSGFLARKYHADMDGKKTPRGKRGWKMFYAVLKGMVLYLQKDEYKPGKALSESDLKN-------- 564 (774)
T ss_pred CccccCCCCCCchhhhhhhhhhhhhccccCCcCCccchhHHHHHHHHhhheEEeeccccCcccchhhhhhhh--------
Confidence 3557788888888999999975422 2 3579999999999888887764331 1010000000
Q ss_pred hhhhhhhcccccccccccccCCCcceEEEcCceEEEecC-CCCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 003839 149 STRIISKRKHKKETTSQRLLNRKPFGEVHLKVSSIRDSK-SDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDMF 226 (792)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~p~G~I~L~~ssi~~~~-~d~~~F~I~t~~-k~~~L~A~s~~dr~~Wi~aL~~a~~~~ 226 (792)
+. .||=..++-..+- ..+..|.+.|.. |.|.|+|.|.++|+.||..|+-|.+.|
T Consensus 565 -----------------------av-svHHALAt~AtdY~KKp~Vf~lrtAdwrv~LFQaps~eEmqsWi~rIN~vAA~f 620 (774)
T KOG0932|consen 565 -----------------------AV-SVHHALATPATDYSKKPHVFKLRTADWRVFLFQAPSQEEMQSWIERINLVAAAF 620 (774)
T ss_pred -----------------------hh-hhhhhhcCCCcccccCCceEEEEeccceeEEEeCCCHHHHHHHHHHHHHHHHhc
Confidence 00 1111112111111 125678898876 899999999999999999999999998
Q ss_pred cc
Q 003839 227 PR 228 (792)
Q Consensus 227 ~~ 228 (792)
.-
T Consensus 621 Sa 622 (774)
T KOG0932|consen 621 SA 622 (774)
T ss_pred cC
Confidence 65
No 72
>KOG4424 consensus Predicted Rho/Rac guanine nucleotide exchange factor/faciogenital dysplasia protein 3 [Signal transduction mechanisms]
Probab=95.60 E-value=0.017 Score=66.77 Aligned_cols=102 Identities=17% Similarity=0.266 Sum_probs=75.1
Q ss_pred CcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCC
Q 003839 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (792)
Q Consensus 92 ~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (792)
..+++|.|.|.+.....-+.||.+|=+.+|.|-+-... . .|. ...
T Consensus 271 eLiKEG~l~Kis~k~~~~qeRylfLFNd~~lyc~~r~~---~-----------~~~---------------------k~~ 315 (623)
T KOG4424|consen 271 ELIKEGQLQKISAKNGTTQERYLFLFNDILLYCKPRKR---L-----------PGS---------------------KYE 315 (623)
T ss_pred HHhhccceeeeeccCCCcceeEEEEehhHHHhhhhhhh---c-----------ccc---------------------eec
Confidence 46899999999877788999999998888888884321 0 000 112
Q ss_pred cceEEEcCceEEEecCCC--CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 003839 172 PFGEVHLKVSSIRDSKSD--DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (792)
Q Consensus 172 p~G~I~L~~ssi~~~~~d--~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~~~ 228 (792)
++-.+.+....+..+... ...|.+....+.+.|+|.|.++..+||++|+.+++.|..
T Consensus 316 ~r~~~s~~~~~v~~~~~~~~~~tF~~~G~~r~vel~a~t~~ek~eWv~~I~~~Id~~kq 374 (623)
T KOG4424|consen 316 VRARCSISHMQVQEDDNEELPHTFILTGKKRGVELQARTEQEKKEWVQAIQDAIDKHKQ 374 (623)
T ss_pred cceeeccCcchhcccccccCCceEEEecccceEEeecCchhhHHHHHHHHHHHHHHHHH
Confidence 334444444444444333 677888777899999999999999999999999998765
No 73
>KOG1117 consensus Rho- and Arf-GTPase activating protein ARAP3 [Signal transduction mechanisms; Cytoskeleton]
Probab=95.11 E-value=0.012 Score=70.07 Aligned_cols=94 Identities=22% Similarity=0.362 Sum_probs=73.5
Q ss_pred CCcceEEEEEeecCCC-CCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccC
Q 003839 91 VGNGISGVLYKWVNYG-KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (792)
Q Consensus 91 ~~~~~~G~L~K~~n~~-kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~ 169 (792)
.+++++|||.|-.--+ --.++||.-+....|.||....+
T Consensus 85 sp~~~~gwldk~~pqg~~~~qkr~vkf~~~s~~yf~~~k~---------------------------------------- 124 (1186)
T KOG1117|consen 85 SPVIKSGWLDKLSPQGEYPFQKRWVKFDGSSLEYFLSPKD---------------------------------------- 124 (1186)
T ss_pred CchhhcchhhccCcCcccccCccceecCCCCccccCCCCC----------------------------------------
Confidence 4588999999964222 23899999999999999996543
Q ss_pred CCcceEEEcCceEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 170 RKPFGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 170 ~~p~G~I~L~~ssi~~~~~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
..++|.|.|...+.. -...+..|.|+++.|+|.+++++..+|..||..++.+...
T Consensus 125 py~k~~i~va~is~v-~~~gd~kfevitn~r~fvfr~e~~~~r~~w~s~l~s~~~~ 179 (1186)
T KOG1117|consen 125 PYSKGPIPVAAISAV-RNFGDNKFEVITNQRTFVFRQESEGERFIWVSPLQSALKE 179 (1186)
T ss_pred CCCCCceeeehhhhh-hhccCceEEEEecceEEEEecCCcccceeeechhhhcchh
Confidence 124577777655432 2345789999999999999999999999999999998654
No 74
>cd01240 PH_beta-ARK Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta ARK1 is a G protein-coupled receptor kinase (GRK). It phosphorylates activated G-protein coupled receptors leading to the release of the previously bound heterotrimeric G protein agonist and thus signal termination. It consists of a domain found in regulators of G-protein signaling (RGS)(RH), a serine/threonine kinase domain and a C-terminal PH domain. The Beta-Ark 1 PH domain has an extended C-terminal helix, which mediates interactions with G beta gamma subunits. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or
Probab=94.68 E-value=0.032 Score=51.65 Aligned_cols=91 Identities=16% Similarity=0.245 Sum_probs=59.6
Q ss_pred cceEEEEEeecCC-CCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCC
Q 003839 93 NGISGVLYKWVNY-GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (792)
Q Consensus 93 ~~~~G~L~K~~n~-~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (792)
.++.||+.|-|+- ...||+|||-|-.+-|..|...+..+.+
T Consensus 3 cIvhGyi~KLGGPFls~WQ~Ry~~LfPNRLE~~~~~~~~~~e-------------------------------------- 44 (116)
T cd01240 3 CIVHGYIKKLGGPFLSQWQTRYFKLYPNRLELYGESEANKPE-------------------------------------- 44 (116)
T ss_pred eEEeeehhhhCCHHHHHHHHHHheeCcceeeecccccccCCc--------------------------------------
Confidence 4789999999764 4679999999988888886432221100
Q ss_pred cceEEEc---C-ceE-EEecCCCCCcEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 172 PFGEVHL---K-VSS-IRDSKSDDKRFSIFT-GTKRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 172 p~G~I~L---~-~ss-i~~~~~d~~~F~I~t-~~k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
-|.+ . +|. .... ..+++..|.. +++.|.|+++|.-+..+|...|+.+-..
T Consensus 45 ---Li~M~~i~~V~~e~~~i-K~~~CI~ik~k~~~k~vlt~~d~i~l~qW~~elr~a~r~ 100 (116)
T cd01240 45 ---LITMDQIEDVSVEFQQI-KEENCILLKIRDEKKIVLTNSDEIELKQWKKELRDAHRE 100 (116)
T ss_pred ---EEEeehhhhcchhheee-ccCceEEEEEcCCceEEEecCCcHHHHHHHHHHHHHHHH
Confidence 1111 1 110 0011 2244455443 5678999999999999999999888554
No 75
>cd01226 PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exo84 is a subunit of the exocyt complex, which is important in intracellular trafficking. In metazoa, Exo84 has a PH domain towards its N-terminus. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=94.30 E-value=0.4 Score=44.24 Aligned_cols=51 Identities=16% Similarity=0.272 Sum_probs=39.4
Q ss_pred eEEEcCceEEE---ecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003839 174 GEVHLKVSSIR---DSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKD 224 (792)
Q Consensus 174 G~I~L~~ssi~---~~~~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~ 224 (792)
.++.|..-.+. .+..-.+.|.|.++.+++.++|+|++++.+||+.|+.|+.
T Consensus 46 ~~~~L~~i~V~ni~D~~~~kNafki~t~~~s~i~qaes~~~K~eWl~~le~a~~ 99 (100)
T cd01226 46 STYSLNSVAVVNVKDRENAKKVLKLLIFPESRIYQCESARIKTEWFEELEQAKR 99 (100)
T ss_pred EEEehHHeEEEecCCCcCcCceEEEEeCCccEEEEeCCHHHHHHHHHHHHHHhc
Confidence 55666433332 2222378899999999999999999999999999999874
No 76
>KOG0248 consensus Cytoplasmic protein Max-1, contains PH, MyTH4 and FERM domains [Cytoskeleton]
Probab=94.08 E-value=0.016 Score=67.71 Aligned_cols=92 Identities=5% Similarity=-0.271 Sum_probs=63.7
Q ss_pred cCCCCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccc
Q 003839 88 NDIVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRL 167 (792)
Q Consensus 88 ~~~~~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~ 167 (792)
....-+...|+|.|+...+|.||.|||++.+|.+.||+++-+.
T Consensus 254 y~~~~~s~~k~lkrr~~v~k~gqi~~y~~~~~~~~~p~s~~d~------------------------------------- 296 (936)
T KOG0248|consen 254 YWTQLTSRIKSLKRRYVVFKNGQISFYRKHNNRDEEPASKIDI------------------------------------- 296 (936)
T ss_pred chhcchHHHHHHHhHheeeccceEEEEEcCCCccccccCcccc-------------------------------------
Confidence 3344467889999998899999999999999999999976541
Q ss_pred cCCCcceEEEcCce-EE-EecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHH
Q 003839 168 LNRKPFGEVHLKVS-SI-RDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAV 222 (792)
Q Consensus 168 ~~~~p~G~I~L~~s-si-~~~~~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a 222 (792)
+.|++-+... ++ ........ ...+-+-+++|-++...-.++||++++..
T Consensus 297 ----~s~~~~~~~~~s~~fqli~~t~--~~~~~~~s~~lt~dw~~iL~~~iKv~~~~ 347 (936)
T KOG0248|consen 297 ----RSVTKLEQQGAAYAFQLITSTD--KMNFMTESERTTHDWVTILSAAIKATTLR 347 (936)
T ss_pred ----cccceeeccchhHHhhhhhhce--eEEEeccChhhhhhhHHHHHHHHHHHhcc
Confidence 2233333321 11 11111112 23344567899999999999999999876
No 77
>cd01232 PH_TRIO Trio pleckstrin homology (PH) domain. Trio pleckstrin homology (PH) domain. Trio is a multidomain signaling protein that contains two RhoGEF(DH)-PH domains in tandem. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=94.05 E-value=0.89 Score=42.98 Aligned_cols=53 Identities=17% Similarity=0.475 Sum_probs=40.8
Q ss_pred cceEEEcCceEEEecC-CCCCcEEEEeCC-----eEEEEEcCCHHHHHHHHHHHHHHHH
Q 003839 172 PFGEVHLKVSSIRDSK-SDDKRFSIFTGT-----KRLHLRAETREDRFAWMEALQAVKD 224 (792)
Q Consensus 172 p~G~I~L~~ssi~~~~-~d~~~F~I~t~~-----k~~~L~A~s~~dr~~Wi~aL~~a~~ 224 (792)
-+..|.|..-.+.++. .|+++|.|...+ .+|.|+|.|.+.++.||..|+.+.+
T Consensus 55 yK~~ikls~l~l~e~v~gd~~kF~i~~~~~~~~~~~~ilqA~s~e~K~~W~~~I~~il~ 113 (114)
T cd01232 55 YKSKLQVSKMGLTEHVEGDPCRFALWSGDPPISDNRIILKANSQETKQEWVKKIREILQ 113 (114)
T ss_pred EecceeeeeeEeEEccCCCCceEEEEeCCCCCCceEEEEECCCHHHHHHHHHHHHHHhh
Confidence 3566666665665544 568999986543 5899999999999999999998754
No 78
>cd01228 PH_BCR-related BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. The BCR-related protein has a RhoGEF(DH) domain followed by a PH domain, a C2 domain and a RhoGAP domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinases, tyrosine kinases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=93.93 E-value=0.3 Score=44.38 Aligned_cols=90 Identities=19% Similarity=0.191 Sum_probs=61.5
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCcc
Q 003839 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPF 173 (792)
Q Consensus 94 ~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p~ 173 (792)
..+|+|.|-. .+.=|.|=|-|=+.+|.|-+...... | .....+..
T Consensus 4 v~eg~lvel~--~~~rK~R~~FLFnDlLvc~~ik~~~~--------------~-------------------k~~kY~~~ 48 (96)
T cd01228 4 VKDSFLVELV--EGSRKLRHLFLFTDVLLCAKLKKTSR--------------G-------------------KHQQYDCK 48 (96)
T ss_pred cccceeeeeh--hCCCcceEEEeeccEEEEEEeeeccC--------------c-------------------ccccccee
Confidence 5689999975 34567888888888899888642100 0 01122345
Q ss_pred eEEEcCceEEEecCCCCCcEEE-EeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003839 174 GEVHLKVSSIRDSKSDDKRFSI-FTGTKRLHLRAETREDRFAWMEALQAVK 223 (792)
Q Consensus 174 G~I~L~~ssi~~~~~d~~~F~I-~t~~k~~~L~A~s~~dr~~Wi~aL~~a~ 223 (792)
-.|+|..-.+.... |.+ .+++|+|.+.|.|..|+.+||++|+.-+
T Consensus 49 w~IPL~dl~~~~~~-----~~~~~~~~KSf~~~asS~~Er~eW~~hI~~~~ 94 (96)
T cd01228 49 WYIPLADLSFPSEP-----FRIHNKNGKSYTFLLSSDYERSEWRESIQKLQ 94 (96)
T ss_pred EEEEhHHheecchh-----hhccccCCceEEEEecCHHHHHHHHHHHHHHh
Confidence 67777765554331 444 4578999999999999999999997654
No 79
>cd01248 PH_PLC Phospholipase C (PLC) pleckstrin homology (PH) domain. Phospholipase C (PLC) pleckstrin homology (PH) domain. There are several isozymes of PLC (beta, gamma, delta, epsilon. zeta). While, PLC beta, gamma and delta all have N-terminal PH domains, lipid binding specificity is not conserved between them. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=93.46 E-value=0.49 Score=44.34 Aligned_cols=34 Identities=32% Similarity=0.602 Sum_probs=29.0
Q ss_pred CCCCcEEEEeCC----eEEEEEcCCHHHHHHHHHHHHH
Q 003839 188 SDDKRFSIFTGT----KRLHLRAETREDRFAWMEALQA 221 (792)
Q Consensus 188 ~d~~~F~I~t~~----k~~~L~A~s~~dr~~Wi~aL~~ 221 (792)
..++.|+|+.+. ++++|-|.|.++++.|++.|+.
T Consensus 77 ~e~~~fTIiy~~~~~~k~L~lVA~s~~~a~~W~~gL~~ 114 (115)
T cd01248 77 LEERCFTIVYGTDLNLKSLDLVAPSEEEAKTWVSGLRK 114 (115)
T ss_pred ccccEEEEEECCCCCeeEEEEEECCHHHHHHHHHHHhh
Confidence 347889987754 5899999999999999999974
No 80
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=93.46 E-value=0.16 Score=59.32 Aligned_cols=35 Identities=29% Similarity=0.522 Sum_probs=30.0
Q ss_pred CCcEEEE-eCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003839 190 DKRFSIF-TGTKRLHLRAETREDRFAWMEALQAVKD 224 (792)
Q Consensus 190 ~~~F~I~-t~~k~~~L~A~s~~dr~~Wi~aL~~a~~ 224 (792)
+..|.+. .++|.+-|+|.+.++|+.||.+||.+..
T Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (496)
T PTZ00283 455 AHVFAVAFKTGRRLLFQARSDPERDAWMQKIQSVLG 490 (496)
T ss_pred CcEEEEEecCCcEEEEecCCchhHHHHHHHHHHhcC
Confidence 5667764 4679999999999999999999998864
No 81
>KOG3543 consensus Ca2+-dependent activator protein [Signal transduction mechanisms]
Probab=93.09 E-value=0.035 Score=64.20 Aligned_cols=93 Identities=22% Similarity=0.392 Sum_probs=61.5
Q ss_pred CcceEEEEEeec-CCCCCceeeEEEEeC-Ce----EEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccc
Q 003839 92 GNGISGVLYKWV-NYGKGWRPRWFVLQD-GV----LSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQ 165 (792)
Q Consensus 92 ~~~~~G~L~K~~-n~~kgWk~RwFVL~~-g~----L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~ 165 (792)
.-..+||||--+ |..|.||+|||||-. .. ++-|+.
T Consensus 463 nmkhsgylyaig~nvwkrwkkrffvlvqvsqytfamcsyre--------------------------------------- 503 (1218)
T KOG3543|consen 463 NMKHSGYLYAIGRNVWKRWKKRFFVLVQVSQYTFAMCSYRE--------------------------------------- 503 (1218)
T ss_pred ccccceeehhhhhHHHHHhHhhEEEEEEhhhhhhHhhhhhh---------------------------------------
Confidence 445689999875 778999999999932 11 112221
Q ss_pred cccCCCcceEEEcCceEEEecCCC-----CCc-EEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 166 RLLNRKPFGEVHLKVSSIRDSKSD-----DKR-FSIFTGTKRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 166 ~~~~~~p~G~I~L~~ssi~~~~~d-----~~~-F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
+...|.--|.|.+-+|.-.+.. .+. |.-+..+-+..|..+++.||.-||+|+-.|...
T Consensus 504 --kkaepqel~qldgytvdytdp~pglqgg~~ffnavkegdtvifasddeqdr~lwvqamyratgq 567 (1218)
T KOG3543|consen 504 --KKAEPQELIQLDGYTVDYTDPSPGLQGGKHFFNAVKEGDTVIFASDDEQDRHLWVQAMYRATGQ 567 (1218)
T ss_pred --cccChHHHhhccCeeeccCCCCCccccchHHHHHhccCceEEeccCchhhhhHHHHHHHHhhCC
Confidence 1223556677877776533222 233 333445668889999999999999999877543
No 82
>cd01225 PH_Cool_Pix Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool/Pix contains an N-terminal SH3 domain followed by a RhoGEF (DH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=93.05 E-value=0.5 Score=44.21 Aligned_cols=79 Identities=20% Similarity=0.205 Sum_probs=58.2
Q ss_pred CCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCcceEEEcCceEEEe-
Q 003839 107 KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFGEVHLKVSSIRD- 185 (792)
Q Consensus 107 kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p~G~I~L~~ssi~~- 185 (792)
..=..|||||=.++|......... .+..-.|.+.|+.-+|..
T Consensus 26 qe~~eRyLvLFp~~LlilS~s~r~-------------------------------------sGf~yqGkLPL~~i~v~~l 68 (111)
T cd01225 26 EEKRERYLVLFPNVLLMLSASPRM-------------------------------------SGFIYQGKLPLTGIIVTRL 68 (111)
T ss_pred cccceeEEEEcCceEEEEEcCCCc-------------------------------------cceEEeeeecccccEEech
Confidence 345689999988998887742210 012245899999888873
Q ss_pred c--CCCCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHH
Q 003839 186 S--KSDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAV 222 (792)
Q Consensus 186 ~--~~d~~~F~I~t~~-k~~~L~A~s~~dr~~Wi~aL~~a 222 (792)
. ....+.|.|..+. -+..+.|.+.+|.++||.-|+..
T Consensus 69 Ed~e~~~~aFeI~G~li~~i~v~C~~~~e~~~Wl~hL~~~ 108 (111)
T cd01225 69 EDTEALKNAFEISGPLIERIVVVCNNPQDAQEWVELLNAN 108 (111)
T ss_pred HhccCccceEEEeccCcCcEEEEeCCHHHHHHHHHHHHhh
Confidence 2 2226789998765 67889999999999999999874
No 83
>cd01227 PH_Dbs Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs is a guanine nucleotide exchange factor (GEF), which contains spectrin repeats, a rhoGEF (DH) domain and a PH domain. The Dbs PH domain participates in binding to both the Cdc42 and RhoA GTPases. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=88.24 E-value=5.9 Score=38.51 Aligned_cols=54 Identities=24% Similarity=0.381 Sum_probs=40.9
Q ss_pred cceEEEcCceEEEec-CCCCCcEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 172 PFGEVHLKVSSIRDS-KSDDKRFSIFTGT--KRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 172 p~G~I~L~~ssi~~~-~~d~~~F~I~t~~--k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
-+..|.|..-.+.++ ..|+++|.|-+.. .+|.|+|.|.+.++.||..|+.....
T Consensus 61 yK~~ikls~lglte~v~gd~~kFeiw~~~~~~~yilqA~t~e~K~~Wv~~I~~iL~~ 117 (133)
T cd01227 61 FKQSLKMTAVGITENVKGDTKKFEIWYNAREEVYILQAPTPEIKAAWVNEIRKVLTS 117 (133)
T ss_pred EeeeEEeecccccccCCCCccEEEEEeCCCCcEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 356666655555554 3458899997754 47999999999999999999987553
No 84
>PF15408 PH_7: Pleckstrin homology domain
Probab=86.82 E-value=0.33 Score=43.15 Aligned_cols=96 Identities=11% Similarity=0.173 Sum_probs=53.9
Q ss_pred EEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCcceE
Q 003839 96 SGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFGE 175 (792)
Q Consensus 96 ~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p~G~ 175 (792)
+||||.-- -..-|+||.||..-.|.+|..++..-++.-+ ..+..=.
T Consensus 1 EGYLY~~E--~~si~rRF~~L~~K~~~~~~~KGG~~L~sF~--------------------------------L~~s~~s 46 (104)
T PF15408_consen 1 EGYLYRDE--DSSIQRRFVMLRSKQFNMYEDKGGQYLCSFQ--------------------------------LSSSVVS 46 (104)
T ss_pred CCeEEEec--cchHHHHHHhhhhceeEEecccCCceeeeee--------------------------------hhhhhhh
Confidence 58998742 1347899999999999999987763222100 0000001
Q ss_pred EEcCceEEEecCCCCC--cEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 176 VHLKVSSIRDSKSDDK--RFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 176 I~L~~ssi~~~~~d~~--~F~I~t~~-k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
|.|..-+-..+.-.-. .|-...++ +.+.+-|+|++-++.||++|+.-...
T Consensus 47 ~Pm~~~~~A~~N~Gi~A~G~L~~~~~~~~~~~FA~S~~~~~~Wi~~mN~~s~~ 99 (104)
T PF15408_consen 47 HPMVNFSQAVPNLGINAFGFLMYSPSRRHVQCFASSKKVCQSWIQVMNSPSFR 99 (104)
T ss_pred cccccccccCCCCCeeEEEEEEecCCcchhhhhhhHHHHHHHHHHHhcChhhh
Confidence 1111111000100111 23334444 56889999999999999999865443
No 85
>cd01223 PH_Vav Vav pleckstrin homology (PH) domain. Vav pleckstrin homology (PH) domain. Vav acts as a guanosine nucleotide exchange factor(GEF) for Rho/Rac proteins. Mammalian Vav proteins consist of a calponin homology (CH) domain, an acidic region, a rho-GEF (DH)domain, a PH domain, a Zinc finger region and an SH2 domain, flanked by two SH3 domains. In invertebrates such as Drosophila and C.elegans, Vav is missing the N-terminal SH3 domain . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=86.05 E-value=6.2 Score=37.45 Aligned_cols=34 Identities=18% Similarity=0.256 Sum_probs=27.4
Q ss_pred cEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 192 RFSIFTGT--KRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 192 ~F~I~t~~--k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
.|.|.... ..|.|.|.|++++..||+||..|+.-
T Consensus 78 ~f~L~~~~~~~~~~f~~Ktee~K~kWm~al~~a~sn 113 (116)
T cd01223 78 GFYLAHKQGKTGFTFYFKTEHLRKKWLKALEMAMSN 113 (116)
T ss_pred EEEEEecCCCccEEEEeCCHHHHHHHHHHHHHHHhc
Confidence 35565543 45999999999999999999998753
No 86
>KOG1738 consensus Membrane-associated guanylate kinase-interacting protein/connector enhancer of KSR-like [Nucleotide transport and metabolism]
Probab=84.05 E-value=0.62 Score=54.90 Aligned_cols=39 Identities=28% Similarity=0.469 Sum_probs=31.6
Q ss_pred CCcceEEEEEeec--CCC-CCceeeEEEEeCCeEEEEeecCC
Q 003839 91 VGNGISGVLYKWV--NYG-KGWRPRWFVLQDGVLSYYKIHGP 129 (792)
Q Consensus 91 ~~~~~~G~L~K~~--n~~-kgWk~RwFVL~~g~L~YYk~~~~ 129 (792)
...-++|||++.. +++ ..|++=||||.|..|+.|.++..
T Consensus 560 ~~G~~qg~~~r~k~~~~~~~kW~k~~~~l~~~~l~~y~n~~~ 601 (638)
T KOG1738|consen 560 GRGDRQGWLTRLKLNHLTQEKWRKIWMVLNDDPLLNYRNHRV 601 (638)
T ss_pred ccchhhccchhhccchHHHHHhhhheeeecCchhhhhhhhhh
Confidence 4567899999864 222 45999999999999999998775
No 87
>KOG4807 consensus F-actin binding protein, regulates actin cytoskeletal organization [Cytoskeleton]
Probab=80.84 E-value=0.022 Score=62.66 Aligned_cols=79 Identities=29% Similarity=0.489 Sum_probs=60.9
Q ss_pred CceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCcceEEEcCceEE--Ee
Q 003839 108 GWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFGEVHLKVSSI--RD 185 (792)
Q Consensus 108 gWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p~G~I~L~~ssi--~~ 185 (792)
.|++-||||.+..|.||........ ..--|+|+|..|+- ..
T Consensus 34 ~~~k~~~~~~~~~~~~~~d~~A~~~-------------------------------------~~L~~~~~LR~C~~v~e~ 76 (593)
T KOG4807|consen 34 QWKKHWFVLTDSSLKYYRDSTAEEA-------------------------------------DELDGEIDLRSCTDVTEY 76 (593)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHhc-------------------------------------ccCCccccHHHHHHHHHH
Confidence 4999999999999999996432110 01238899988862 12
Q ss_pred cCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003839 186 SKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (792)
Q Consensus 186 ~~~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~ 223 (792)
+..-...|+|.+.+..|.|.|-+.--+..||.|++...
T Consensus 77 a~q~nY~~~i~~~~~~~tL~~~~s~Ir~~~~~A~~kT~ 114 (593)
T KOG4807|consen 77 AVQRNYGFQIHTKDAVYTLSAMTSGIRRNWIEALRKTV 114 (593)
T ss_pred HHHhccceeecccchhhhhHHHHHHHHHHHHHHHHhcc
Confidence 23447889999999999999999999999999998543
No 88
>KOG3727 consensus Mitogen inducible gene product (contains ERM and PH domains) [Cell cycle control, cell division, chromosome partitioning]
Probab=80.34 E-value=0.34 Score=56.11 Aligned_cols=53 Identities=17% Similarity=0.314 Sum_probs=39.6
Q ss_pred cceEEEcCceEEEecCCC-CCc---EEEEe---CCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003839 172 PFGEVHLKVSSIRDSKSD-DKR---FSIFT---GTKRLHLRAETREDRFAWMEALQAVKD 224 (792)
Q Consensus 172 p~G~I~L~~ssi~~~~~d-~~~---F~I~t---~~k~~~L~A~s~~dr~~Wi~aL~~a~~ 224 (792)
|-+.|+|++|.+.++..+ .-. |.|.. +...++|||++++....||.|-+-|..
T Consensus 400 p~~~i~l~gcev~~dV~~~~~k~~i~l~~~~~~~msEi~LRCd~E~QYA~WMAaCrLASK 459 (664)
T KOG3727|consen 400 PAISINLKGCEVTPDVNLSQQKYAIKLLVPTAEGMSEIWLRCDNEQQYARWMAACRLASK 459 (664)
T ss_pred CCCchhhcCcccCCccccccccceEEEEeecCCccceeEEecCCHHHHHHHHHHhhHhhc
Confidence 668889999888776655 233 44433 456799999999999999998777643
No 89
>KOG3551 consensus Syntrophins (type beta) [Extracellular structures]
Probab=80.04 E-value=1.3 Score=49.56 Aligned_cols=98 Identities=22% Similarity=0.203 Sum_probs=57.4
Q ss_pred CcceEEEEEeec--CCCCCceeeEEEEeCCeEEEEeecCCCccccchhh-ccc---ccccccchhhhhhhcccccccccc
Q 003839 92 GNGISGVLYKWV--NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEET-ERG---CKVIGEESTRIISKRKHKKETTSQ 165 (792)
Q Consensus 92 ~~~~~G~L~K~~--n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~-~~~---~~vig~~~~~~~~~~~~~~~~~~~ 165 (792)
.+..=|||.++. +-.+.|++-+.+|.+.-|..|.+-.-.+-.-+... .+. -|+++.++
T Consensus 291 evkHiGWLaeq~~~~G~~~w~P~l~~lTekelliYes~P~~keaws~P~~~ypLvaTRLvhsg~---------------- 354 (506)
T KOG3551|consen 291 EVKHIGWLAEQVSGGGISQWKPKLMALTEKELLIYESMPWTKEAWSRPRHTYPLVATRLVHSGS---------------- 354 (506)
T ss_pred chhhhhhHHhhccCCChhhhhhheeeechhhhhhhhcChhhHHHhcChhhhhhhhhhhheecCC----------------
Confidence 444559999985 34456999999997777777775332110100000 000 02222110
Q ss_pred cccCCCcceEEEcCceEEEecCCCCCcEEEEeCCe----EEEEEcCCHHHHHHHHHHHH
Q 003839 166 RLLNRKPFGEVHLKVSSIRDSKSDDKRFSIFTGTK----RLHLRAETREDRFAWMEALQ 220 (792)
Q Consensus 166 ~~~~~~p~G~I~L~~ssi~~~~~d~~~F~I~t~~k----~~~L~A~s~~dr~~Wi~aL~ 220 (792)
.+...+ ..-+..|...||++ ++.||+++..|+..|..+|-
T Consensus 355 -~~~s~~--------------~g~~lsFa~RtGTrqGV~thlfrvEThrdLa~WtRslV 398 (506)
T KOG3551|consen 355 -GKGSVI--------------KGLTLSFATRTGTRQGVETHLFRVETHRELAAWTRSLV 398 (506)
T ss_pred -CCCCCc--------------CCceEEEEEecccccceEEEEEEeccHHHHHHHHHHHH
Confidence 011111 11135788999874 79999999999999998774
No 90
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=78.90 E-value=2.9 Score=49.04 Aligned_cols=93 Identities=20% Similarity=0.181 Sum_probs=63.7
Q ss_pred CCcceEEEEEeecCCCCCceeeEEEE-eCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccC
Q 003839 91 VGNGISGVLYKWVNYGKGWRPRWFVL-QDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (792)
Q Consensus 91 ~~~~~~G~L~K~~n~~kgWk~RwFVL-~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~ 169 (792)
+...+.|+|.|+...+ =|+|.|+| ..+.|.|+.....
T Consensus 449 ~~i~k~~~l~k~~~lf--~rkr~lllTn~~rll~~~~~~~---------------------------------------- 486 (604)
T KOG0592|consen 449 SLILKEGALEKRQGLF--ARKRMLLLTNGPRLLYVDPQNL---------------------------------------- 486 (604)
T ss_pred hhHHhHHHHHhhhhhh--hceeEEEecCCCeEEEEecccc----------------------------------------
Confidence 4456778888875544 36799999 7778888883221
Q ss_pred CCcceEEEcCceEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 003839 170 RKPFGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (792)
Q Consensus 170 ~~p~G~I~L~~ssi~~~~~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~~~ 228 (792)
..+|+|.++.+. +.-......|.|.|++|+|+|-- =......|-.||..++...+-
T Consensus 487 -~lk~eip~~~~~-~~e~~n~~~~~i~TP~k~~~l~d-~~~~as~w~~ai~~~~~~~~~ 542 (604)
T KOG0592|consen 487 -VLKGEIPWSPDL-RVELKNSSTFFIHTPNKVYYLED-PEQRASVWCKAIETVRKRYSG 542 (604)
T ss_pred -eeccccccCccc-ceeeccCcceEEECCccceeccC-cccchhHHHHhhhhhhhcccC
Confidence 134777777643 33344567899999999999854 234556799999999655443
No 91
>KOG1170 consensus Diacylglycerol kinase [Lipid transport and metabolism]
Probab=72.99 E-value=0.18 Score=60.28 Aligned_cols=91 Identities=15% Similarity=0.277 Sum_probs=67.2
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCe-EEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCc
Q 003839 94 GISGVLYKWVNYGKGWRPRWFVLQDGV-LSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (792)
Q Consensus 94 ~~~G~L~K~~n~~kgWk~RwFVL~~g~-L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p 172 (792)
...|-+.+..|-...|+.|+|.+++.+ +.|-+.... .-
T Consensus 3 ~~rgl~~~~~ne~Ea~k~r~~~~k~~~~~~vakTa~g-----------------------------------------~~ 41 (1099)
T KOG1170|consen 3 VTRGLDNDVDNEREAWKQSILRAKDRMPEKVAKTASG-----------------------------------------PL 41 (1099)
T ss_pred cccccccccccHHHHHHHHHHHHHHHHHHHHHhccCC-----------------------------------------cc
Confidence 345777777777788999999998877 444443211 12
Q ss_pred ceEEEcCceEEEecCCC--CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 173 FGEVHLKVSSIRDSKSD--DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 173 ~G~I~L~~ssi~~~~~d--~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
.-.+.|..+.+.++... ...|+|+++-|+..++|++..++..||.+++..+..
T Consensus 42 ~~~~d~t~a~~~eSs~~n~~~sf~vi~~~rk~r~~adn~ke~e~wi~~~kt~q~~ 96 (1099)
T KOG1170|consen 42 FALLDLTSAHVAESSTNNPRPSFCVITPVRKHRLCADNRKEMEKWINQSKTPQHL 96 (1099)
T ss_pred HHHHhcccccccccccCCCCCCeeEecccHHhhhhccchhHHHHhhccccchhhc
Confidence 34555666666655443 677999999999999999999999999999988764
No 92
>PF15405 PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A.
Probab=67.44 E-value=8.2 Score=37.54 Aligned_cols=24 Identities=21% Similarity=0.430 Sum_probs=20.0
Q ss_pred eEEEEEcCCHHHHHHHHHHHHHHH
Q 003839 200 KRLHLRAETREDRFAWMEALQAVK 223 (792)
Q Consensus 200 k~~~L~A~s~~dr~~Wi~aL~~a~ 223 (792)
..|.|.|+|..+|++|+++|..++
T Consensus 112 ~~~TLyA~s~~~R~~W~e~I~~qq 135 (135)
T PF15405_consen 112 YSYTLYASSAQARQKWLEKIEEQQ 135 (135)
T ss_dssp EEEEEE-SSHHHHHHHHHHHHHH-
T ss_pred eEEEEEeCCHHHHHHHHHHHHhcC
Confidence 458999999999999999998764
No 93
>KOG3520 consensus Predicted guanine nucleotide exchange factor [Signal transduction mechanisms]
Probab=67.34 E-value=6 Score=50.15 Aligned_cols=57 Identities=21% Similarity=0.415 Sum_probs=47.3
Q ss_pred ceEEEcCceEEEecCCCCCcEEEEe-C---CeEEEEEcCCHHHHHHHHHHHHHHHHhcccc
Q 003839 173 FGEVHLKVSSIRDSKSDDKRFSIFT-G---TKRLHLRAETREDRFAWMEALQAVKDMFPRM 229 (792)
Q Consensus 173 ~G~I~L~~ssi~~~~~d~~~F~I~t-~---~k~~~L~A~s~~dr~~Wi~aL~~a~~~~~~~ 229 (792)
.++|.|..-.+++...|.+.|.|++ . -..|.|.|.|.+||..||+-|+.++...++-
T Consensus 667 spVisL~~livRevAtd~ka~FlIs~s~~~pqmYEL~a~T~serntW~~li~~~v~s~~~~ 727 (1167)
T KOG3520|consen 667 SPVISLQKLIVREVATDEKAFFLISMSDQGPEMYELVAQSKSERNTWIQLIQDAVASCPRN 727 (1167)
T ss_pred CCceehHHHHHHHHhccccceEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHHhCCcc
Confidence 5788888777777778877776544 3 3679999999999999999999999998874
No 94
>KOG4424 consensus Predicted Rho/Rac guanine nucleotide exchange factor/faciogenital dysplasia protein 3 [Signal transduction mechanisms]
Probab=63.07 E-value=8.7 Score=45.26 Aligned_cols=92 Identities=18% Similarity=0.127 Sum_probs=59.1
Q ss_pred ceEEEEEeecCCCCCceeeEEEE---eCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCC
Q 003839 94 GISGVLYKWVNYGKGWRPRWFVL---QDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (792)
Q Consensus 94 ~~~G~L~K~~n~~kgWk~RwFVL---~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (792)
.+.+.|.+.-..+++|..-|++. ++-+++-|....+-
T Consensus 498 ~~~s~l~~~~~~~~~g~~a~~~vP~~d~~~~~~Yg~~qDv---------------------------------------- 537 (623)
T KOG4424|consen 498 VICSHLKYMEAAGKTGILAWSVVPKSDPLVDYSYGSPQDV---------------------------------------- 537 (623)
T ss_pred eehhhHHHHhhcCccceeeeeeccCCCCccccccCCcccc----------------------------------------
Confidence 44455544433668899999998 56677777765441
Q ss_pred CcceEEEcCceEEEec--C--CC-CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 171 KPFGEVHLKVSSIRDS--K--SD-DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 171 ~p~G~I~L~~ssi~~~--~--~d-~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
.....|.|.++.+..- . .| ...|.++.....+||.|+|++-++.|++.|..|..-
T Consensus 538 ~a~~~iPl~~~~v~~pe~~~~~D~~~~~k~~~s~~~~~~~a~~~q~qq~wl~~l~~A~~~ 597 (623)
T KOG4424|consen 538 RAQATIPLPGVEVTIPEFVRREDLFHVFKLVQSHLSWHLAADDEQLQQRWLEVLLLAVSG 597 (623)
T ss_pred ccccccccCccccCCCcccccchhcchhhhhhhcceeeeccCCHHHHHHHHHHHHhhhcc
Confidence 1224566665554311 1 11 222334444568999999999999999999988654
No 95
>cd01231 PH_Lnk LNK-family Pleckstrin homology (PH) domain. LNK-family Pleckstrin homology (PH) domain. The Lnk family of proteins consists of Lnk, APS and SH2B. They are adaptor proteins consisting of a PH domain and an SH2 domain, which mediates signaling through growth factor receptors. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. The lnk family PH domain is likely involved in targeting of the adaptor proteins to the plasma membrane.
Probab=55.59 E-value=54 Score=30.55 Aligned_cols=36 Identities=8% Similarity=0.218 Sum_probs=29.5
Q ss_pred CCCCCcEEEEeCCe-EEEEEcCCHHHHHHHHHHHHHH
Q 003839 187 KSDDKRFSIFTGTK-RLHLRAETREDRFAWMEALQAV 222 (792)
Q Consensus 187 ~~d~~~F~I~t~~k-~~~L~A~s~~dr~~Wi~aL~~a 222 (792)
.+..+.|.+...+. .|.|.|.+.+++..|+..|+.+
T Consensus 71 PD~~nTFvLK~~~~~eyI~Ea~d~~q~~SWla~Ir~C 107 (107)
T cd01231 71 PDNLYTFVLKVDDNTDIIFEVGDEQQLNSWLAELRYC 107 (107)
T ss_pred cCcccEEEEEecCCceEEEEcCCHHHHHHHHHHHhcC
Confidence 34578899877554 6999999999999999999853
No 96
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=53.23 E-value=48 Score=39.28 Aligned_cols=38 Identities=21% Similarity=0.299 Sum_probs=28.1
Q ss_pred ecCCCCCcEEEEeCCeEEEEEcCC------------HHHHHHHHHHHHHHH
Q 003839 185 DSKSDDKRFSIFTGTKRLHLRAET------------REDRFAWMEALQAVK 223 (792)
Q Consensus 185 ~~~~d~~~F~I~t~~k~~~L~A~s------------~~dr~~Wi~aL~~a~ 223 (792)
.....+..|.|.|++-+|++ .++ .+-.+.|-.||+.|-
T Consensus 474 p~~~~phcFEI~T~~~vyfV-ge~p~~~~~~~~g~g~d~a~~w~~ai~~al 523 (888)
T KOG4236|consen 474 PAGTNPHCFEIRTATTVYFV-GENPSSTPGGESGVGLDAAQGWETAIQQAL 523 (888)
T ss_pred CCCCCCceEEEEeeeEEEEe-cCCCCCCccccccccchhhccCchhhhhcc
Confidence 34556899999999955554 555 455888999998764
No 97
>KOG3531 consensus Rho guanine nucleotide exchange factor CDEP [Signal transduction mechanisms]
Probab=49.02 E-value=10 Score=46.35 Aligned_cols=98 Identities=28% Similarity=0.370 Sum_probs=70.1
Q ss_pred cceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCc
Q 003839 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (792)
Q Consensus 93 ~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p 172 (792)
-+.+|-|.|-. .||-|+|-|-|=..+|.|- +++.+ + .+-.+.
T Consensus 750 ~ir~g~llK~s--kkgLqqrmfFLfsdillyt-sk~~~---~--------------------------------~~~fri 791 (1036)
T KOG3531|consen 750 FIRSGCLLKLS--KKGLQQRMFFLFSDILLYT-SKGPD---V--------------------------------QKCFRI 791 (1036)
T ss_pred hhhcCCchhhc--cccchhhhhhhhhhhheec-cCCCC---h--------------------------------hheeEe
Confidence 46788898865 3778999888866666553 33321 0 111234
Q ss_pred ceEEEcCceEEEecCC---CCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcccc
Q 003839 173 FGEVHLKVSSIRDSKS---DDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPRM 229 (792)
Q Consensus 173 ~G~I~L~~ssi~~~~~---d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~~~~ 229 (792)
.|.|.|. -++..+.. -+.+|.|.++.+..+..|.+..+...|+..++.+++..++.
T Consensus 792 ~g~lP~~-l~~en~en~~s~p~~~ti~~~qk~i~vsast~~~sk~~~~~r~~~i~~~~k~ 850 (1036)
T KOG3531|consen 792 NGDLPLT-LTMENSENEWSVPHCFTISGAQKQIYVSASTRRESKKWEFDRRKAIDLAPKK 850 (1036)
T ss_pred ccCCceE-eeeecccccccCCceEEEeccceEEEEeccchhhhhhhhhccchhhhhcccc
Confidence 5777776 34443322 16899999999999999999999999999999999887764
No 98
>PF08458 PH_2: Plant pleckstrin homology-like region; InterPro: IPR013666 This domain describes a pleckstrin homology (PH)-like region found in several plant proteins of unknown function.
Probab=44.57 E-value=37 Score=32.05 Aligned_cols=34 Identities=12% Similarity=0.380 Sum_probs=29.3
Q ss_pred CcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003839 191 KRFSIFTGTKRLHLRAETREDRFAWMEALQAVKD 224 (792)
Q Consensus 191 ~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~ 224 (792)
+-|.|.|..+...|.|+|..+.+.|+++|+.--.
T Consensus 71 ~yfgL~T~~G~vEfec~~~~~~k~W~~gI~~mL~ 104 (110)
T PF08458_consen 71 RYFGLKTAQGVVEFECDSQREYKRWVQGIQHMLS 104 (110)
T ss_pred EEEEEEecCcEEEEEeCChhhHHHHHHHHHHHHH
Confidence 3466889989999999999999999999987544
No 99
>cd01255 PH_TIAM TIAM Pleckstrin homology (PH) domain. TIAM Pleckstrin homology (PH) domain. TIAM (T-cell invasion and metastasis) is a guanine nucleotide exchange factor specific for RAC1. It consists of an N-terminal PH domain followed by Raf-like ras binding domain(RDB), a PDZ domain, a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. This subfamily contains the alignment of the PH domain that follows the DH domain.
Probab=42.96 E-value=2e+02 Score=28.59 Aligned_cols=28 Identities=21% Similarity=0.291 Sum_probs=25.1
Q ss_pred CCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 198 GTKRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 198 ~~k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
+.++|+|++.+++.+...|..++.....
T Consensus 129 pE~vfqLCcS~~E~k~~flK~Irsilre 156 (160)
T cd01255 129 PEKVFVLCCSTAESRNAFLKTIRSILRE 156 (160)
T ss_pred CcceEEEecCCHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999988654
No 100
>PF12915 DUF3833: Protein of unknown function (DUF3833); InterPro: IPR024409 This is a family of uncharacterised proteins found in Proteobacteria.
Probab=38.51 E-value=71 Score=32.28 Aligned_cols=59 Identities=24% Similarity=0.476 Sum_probs=40.0
Q ss_pred EEEeecCccCCCCcEEEEEEEcCCCcEE----EEEEeEecceEE-----EEecccCCCCcccccCCccEEEEeeCCCCC
Q 003839 608 LKFKEQSIIDRNPHQVHGIVQDRNGKTV----ATLFGKWDESIH-----YVIGECSGKGKELESLSEACLLWKRSKPPK 677 (792)
Q Consensus 608 i~F~~k~~fg~~~~~V~G~V~d~~g~~~----~~i~G~Wd~~l~-----~~~~~~~~~~~~~~~~~~~~~lW~~~~~p~ 677 (792)
-.|....||.|+.. -.|.|.|..|++. ..|.|+|++..- +.+.|+ ...+..|.+.+..+
T Consensus 21 P~~~l~~fF~G~~~-A~G~~~dr~G~v~rrF~v~i~g~w~g~~~tL~E~F~y~DG----------e~q~R~W~l~~~~~ 88 (164)
T PF12915_consen 21 PKFDLEEFFNGKLV-AWGMFQDRSGKVTRRFTVDIDGSWDGNTGTLDEDFVYDDG----------ETQTRVWTLTKTGD 88 (164)
T ss_pred CccCHHHHCCCcEE-EEEEEECCCCCEEEEEEEEEEEEEECCEEEEEEEEEECCC----------CEEEEEEEEEECCC
Confidence 35666778888754 4899999999864 579999987642 334443 23456788776443
No 101
>KOG3551 consensus Syntrophins (type beta) [Extracellular structures]
Probab=37.81 E-value=28 Score=39.37 Aligned_cols=54 Identities=20% Similarity=0.391 Sum_probs=42.7
Q ss_pred cceEEEcCceEEEe----cCCCCCcEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 172 PFGEVHLKVSSIRD----SKSDDKRFSIFTGT--KRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 172 p~G~I~L~~ssi~~----~~~d~~~F~I~t~~--k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
-+..|.|+-|.+.. .+..++.|.|.+++ .++.|||.+..+...|.+||.++...
T Consensus 214 d~k~IpLKm~yvaR~~~~~DpEnR~lEihSpdg~~tliLR~kdsa~A~~Wf~AiHa~v~~ 273 (506)
T KOG3551|consen 214 DRKTIPLKMAYVARNLIDADPENRQLEIHSPDGRHTLILRAKDSAEADSWFEAIHANVNT 273 (506)
T ss_pred cccccchhhHHHHhhCCCCCcccceeeeeCCCCcceEEEEccCcHHHHHHHHHHHHHHhh
Confidence 35788898876532 23336789999986 47999999999999999999998764
No 102
>PF14254 DUF4348: Domain of unknown function (DUF4348); PDB: 3SBU_A.
Probab=37.05 E-value=40 Score=36.49 Aligned_cols=40 Identities=23% Similarity=0.430 Sum_probs=24.9
Q ss_pred ecceeeeeeccceeeEeecceEEE-Ee-CCcceEEEEEeecC
Q 003839 575 KVTSSIYNLILGKLYCDHYGTMRI-EG-NREYSCKLKFKEQS 614 (792)
Q Consensus 575 ~p~~~i~nii~G~~~ie~~G~~~I-~~-~tg~~a~i~F~~k~ 614 (792)
+|...|.||+.|+.|.+-..++.+ ++ .+|+..++.|+.++
T Consensus 225 lP~~~i~NI~YGQky~~s~~KIl~~rGi~NG~e~~l~Fk~~~ 266 (273)
T PF14254_consen 225 LPKGKIYNINYGQKYTESNQKILVFRGIANGLETELYFKKRG 266 (273)
T ss_dssp --SSEEEEEESS----T-SEEEEEEEESSS--EEEEEEEEET
T ss_pred CCccceeeeecccccCCCCceEEEEEeecCceeEEEEEEEcC
Confidence 588999999999999996555543 45 79999999998653
No 103
>KOG2070 consensus Guanine nucleotide exchange factor [Nucleotide transport and metabolism]
Probab=37.00 E-value=48 Score=38.63 Aligned_cols=79 Identities=18% Similarity=0.280 Sum_probs=51.9
Q ss_pred CCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCcceEEEcCceEEEec
Q 003839 107 KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFGEVHLKVSSIRDS 186 (792)
Q Consensus 107 kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p~G~I~L~~ssi~~~ 186 (792)
..=+-|||+|=-.+|.++..-.+.. - +| -.|.+.+.+-.|..-
T Consensus 323 ad~~dRy~~LF~~~llflsvs~rMs-----------~--------fI------------------yegKlp~tG~iV~kl 365 (661)
T KOG2070|consen 323 ADEKDRYLLLFPNVLLFLSVSPRMS-----------G--------FI------------------YEGKLPTTGMIVTKL 365 (661)
T ss_pred cchhhheeeeccceeeeeEeccccc-----------h--------hh------------------hccccccceeEEeeh
Confidence 3456899999777777777543311 0 11 125556665555422
Q ss_pred C-C--CCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHH
Q 003839 187 K-S--DDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAV 222 (792)
Q Consensus 187 ~-~--d~~~F~I~t~~-k~~~L~A~s~~dr~~Wi~aL~~a 222 (792)
. . ..++|.|...+ -.....|+...|.++|+++|+..
T Consensus 366 Edte~~~nafeis~~ti~rIv~~c~~~~~l~~wve~ln~~ 405 (661)
T KOG2070|consen 366 EDTENHRNAFEISGSTIERIVVSCNNQQDLQEWVEHLNKQ 405 (661)
T ss_pred hhhhcccccccccccchhheeeccCChHHHHHHHHHhhhc
Confidence 1 1 26788887665 34677899999999999999864
No 104
>KOG3523 consensus Putative guanine nucleotide exchange factor TIM [Signal transduction mechanisms]
Probab=32.00 E-value=71 Score=38.29 Aligned_cols=20 Identities=45% Similarity=0.775 Sum_probs=18.9
Q ss_pred EEEEEcCCHHHHHHHHHHHH
Q 003839 201 RLHLRAETREDRFAWMEALQ 220 (792)
Q Consensus 201 ~~~L~A~s~~dr~~Wi~aL~ 220 (792)
.|.|+|+|..||++||.||.
T Consensus 572 e~lL~a~s~Sd~~RWi~Al~ 591 (695)
T KOG3523|consen 572 ELLLSAESQSDRQRWISALR 591 (695)
T ss_pred eeeecCCchHHHHHHHHhcC
Confidence 49999999999999999997
No 105
>PF10504 DUF2452: Protein of unknown function (DUF2452); InterPro: IPR019534 This entry contains proteins that have no known function.
Probab=26.21 E-value=53 Score=32.89 Aligned_cols=26 Identities=23% Similarity=0.470 Sum_probs=19.0
Q ss_pred CCCCCCCCCCCeeEEEecCCCEEEEE
Q 003839 505 ICKPFNPLLGETYEADYPDKGLQFFS 530 (792)
Q Consensus 505 ~kKPfNPiLGETfe~~~~d~g~rf~a 530 (792)
.+==|.|+.|+||++...++|..|++
T Consensus 84 A~cnF~pipG~iYhLY~r~~G~~ylS 109 (159)
T PF10504_consen 84 AKCNFEPIPGQIYHLYRRENGQDYLS 109 (159)
T ss_pred cccCceecCCCEEEEEECCCCCEEEE
Confidence 33458999999999987655655554
No 106
>cd05135 RasGAP_RASAL Ras GTPase activating-like protein (RASAL) or RASAL1 is a member of the GAP1 family, and a Ca2+ sensor responding in-phase to repetitive Ca2+ signals by associating with the plasma membrane and deactivating Ras. It contains a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin-homology domain that is associated with a Bruton's tyrosine kinase motif. RASAL, like Ca2+ -promoted Ras inactivator (CAPRI, or RASAL4), is a cytosolic protein that undergoes a rapid translocation to the plasma membrane in response to receptor-mediated elevation in the concentration of intracellular free Ca2+, a translocation that activates its ability to function as a RasGAP. However, unlike RASAL4, RASAL undergoes an oscillatory translocation to the plasma membrane that occurs in synchrony with repetitive Ca2+ spikes.
Probab=21.11 E-value=28 Score=39.01 Aligned_cols=26 Identities=23% Similarity=0.244 Sum_probs=19.2
Q ss_pred CcceEEEEEeecC-----CC-CCceeeEEEEe
Q 003839 92 GNGISGVLYKWVN-----YG-KGWRPRWFVLQ 117 (792)
Q Consensus 92 ~~~~~G~L~K~~n-----~~-kgWk~RwFVL~ 117 (792)
...++|++.|+.. .. .+||+|||.|.
T Consensus 302 ~~~~eg~~~~r~~~~~~~~~~~~fkk~~f~l~ 333 (333)
T cd05135 302 VTVKEGYLHKRKTEGPQLLTRFAFKKRYFWLS 333 (333)
T ss_pred chhhhhHhhhccccCCCCcccccccceeeecC
Confidence 3568899999853 12 26999999873
Done!