Query 003839
Match_columns 792
No_of_seqs 439 out of 2107
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 05:47:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003839.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003839hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zhx_A KES1 protein; oxysterol 100.0 3.1E-75 1E-79 652.5 30.3 307 426-756 9-371 (438)
2 2rsg_A Collagen type IV alpha- 99.9 6.6E-22 2.2E-26 175.5 10.8 93 93-223 1-93 (94)
3 3rcp_A Pleckstrin homology dom 99.8 1.3E-20 4.3E-25 169.7 11.3 96 95-228 1-97 (103)
4 2d9x_A Oxysterol binding prote 99.8 7.9E-20 2.7E-24 169.6 11.2 102 90-229 5-109 (120)
5 2dhk_A TBC1 domain family memb 99.8 7.2E-19 2.5E-23 163.2 14.0 100 90-229 5-109 (119)
6 1v88_A Oxysterol binding prote 99.8 4.6E-19 1.6E-23 168.1 12.6 96 90-226 5-126 (130)
7 1x1f_A Signal-transducing adap 99.8 7E-19 2.4E-23 170.7 12.5 96 90-225 15-114 (149)
8 2da0_A 130-kDa phosphatidylino 99.8 3.9E-18 1.3E-22 156.9 15.6 98 90-228 7-105 (114)
9 2cod_A Centaurin-delta 1; ARF 99.8 6.2E-18 2.1E-22 155.1 15.1 96 91-227 6-102 (115)
10 1wgq_A FYVE, rhogef and PH dom 99.8 7.4E-18 2.5E-22 153.2 15.1 95 91-225 6-104 (109)
11 4a6h_A Phosphatidylinositol 4, 99.8 3.2E-18 1.1E-22 160.2 12.5 95 93-224 6-118 (120)
12 1v5u_A SBF1, SET binding facto 99.8 5.1E-18 1.8E-22 155.4 12.7 96 90-225 5-112 (117)
13 1pls_A Pleckstrin homology dom 99.8 8.7E-18 3E-22 153.5 14.0 96 92-227 4-104 (113)
14 2d9v_A Pleckstrin homology dom 99.7 9.6E-18 3.3E-22 158.2 14.5 96 90-225 5-115 (130)
15 1v89_A Hypothetical protein KI 99.7 9.4E-18 3.2E-22 153.5 13.9 97 90-226 5-114 (118)
16 1fgy_A GRP1; PH domain, signal 99.7 1.2E-17 4.1E-22 155.0 14.4 97 91-227 3-123 (127)
17 1x05_A Pleckstrin; PH domain, 99.7 1.2E-17 4.1E-22 156.1 14.2 101 87-227 12-123 (129)
18 1fao_A Dual adaptor of phospho 99.7 1.2E-17 4.2E-22 155.4 14.1 99 90-228 15-116 (126)
19 1wi1_A Calcium-dependent activ 99.7 6.3E-18 2.1E-22 158.6 11.6 94 92-225 7-111 (126)
20 2rlo_A Centaurin-gamma 1; spli 99.7 7.1E-18 2.4E-22 158.5 11.8 111 92-225 3-125 (128)
21 2dn6_A KIAA0640 protein; PH do 99.7 1.7E-17 5.8E-22 151.5 13.7 99 90-228 5-107 (115)
22 1eaz_A Tandem PH domain contai 99.7 1.3E-17 4.3E-22 154.6 13.0 99 90-228 11-115 (125)
23 3aj4_A Pleckstrin homology dom 99.7 5.3E-18 1.8E-22 154.7 10.1 95 90-224 2-111 (112)
24 2dkp_A Pleckstrin homology dom 99.7 2.2E-17 7.4E-22 153.9 14.2 97 89-225 17-120 (128)
25 2lul_A Tyrosine-protein kinase 99.7 2.9E-17 9.8E-22 161.6 15.0 98 92-228 14-125 (164)
26 2i5f_A Pleckstrin; PH domain, 99.7 2.7E-17 9.3E-22 148.7 13.5 93 91-223 5-108 (109)
27 1upq_A PEPP1; PH domain, phosp 99.7 4.1E-17 1.4E-21 150.9 13.9 95 91-225 9-110 (123)
28 1btk_A Bruton'S tyrosine kinas 99.7 2.1E-17 7.3E-22 163.4 12.3 101 92-228 2-136 (169)
29 2d9y_A Pleckstrin homology dom 99.7 5.2E-17 1.8E-21 148.7 13.9 95 91-225 9-110 (117)
30 1u5d_A SKAP55, SRC kinase-asso 99.7 2.1E-17 7.1E-22 148.6 10.8 95 92-226 2-107 (108)
31 1v5p_A Pleckstrin homology dom 99.7 2.4E-17 8.2E-22 155.5 11.6 99 92-226 14-122 (126)
32 2cof_A Protein KIAA1914; PH do 99.7 1.6E-17 5.6E-22 150.9 9.8 94 91-225 6-102 (107)
33 2yry_A Pleckstrin homology dom 99.7 7.3E-17 2.5E-21 149.0 14.3 95 91-225 20-121 (122)
34 1wg7_A Dedicator of cytokinesi 99.7 4.5E-17 1.6E-21 156.5 12.0 98 90-226 15-126 (150)
35 1unq_A RAC-alpha serine/threon 99.7 1.3E-17 4.5E-22 155.2 7.9 98 91-228 6-114 (125)
36 2coc_A FYVE, rhogef and PH dom 99.7 6.1E-17 2.1E-21 149.8 12.2 94 91-225 6-107 (112)
37 2y7b_A Actin-binding protein a 99.7 3.4E-17 1.2E-21 153.9 10.2 99 91-226 3-130 (134)
38 1x1g_A Pleckstrin 2; PH domain 99.7 4.2E-17 1.5E-21 152.2 10.1 96 91-225 16-125 (129)
39 2w2x_D 1-phosphatidylinositol- 99.7 9.2E-17 3.2E-21 150.6 11.9 104 91-225 10-120 (124)
40 1u5f_A SRC-associated adaptor 99.7 8.7E-17 3E-21 154.5 12.0 97 91-227 15-122 (148)
41 1btn_A Beta-spectrin; signal t 99.7 1.1E-16 3.7E-21 144.0 11.3 94 95-222 1-106 (106)
42 2p0d_A RHO GTPase-activating p 99.7 2.2E-16 7.6E-21 149.1 13.1 109 91-228 10-128 (129)
43 3cxb_B Pleckstrin homology dom 99.7 2.4E-16 8.2E-21 145.2 12.5 92 94-225 1-102 (112)
44 1wjm_A Beta-spectrin III; PH d 99.7 2.2E-16 7.5E-21 146.8 12.1 104 90-227 5-120 (123)
45 1u5e_A SRC-associated adaptor 99.7 2.4E-16 8.4E-21 161.3 13.4 101 85-225 98-209 (211)
46 1dyn_A Dynamin; signal transdu 99.6 4.3E-16 1.5E-20 145.0 11.1 96 92-228 11-120 (125)
47 2j59_M RHO-GTPase activating p 99.6 7.6E-16 2.6E-20 151.0 11.3 96 92-225 2-112 (168)
48 3tfm_A Myosin X; split PH doma 99.6 9.6E-16 3.3E-20 158.5 11.4 97 89-225 54-156 (228)
49 2r09_A Cytohesin-3; autoinhibi 99.6 5.9E-15 2E-19 161.8 13.2 95 92-226 212-330 (347)
50 3a8p_A T-lymphoma invasion and 99.6 6.6E-15 2.2E-19 155.5 12.5 103 91-227 9-127 (263)
51 3lju_X ARF-GAP with dual PH do 99.6 5.4E-15 1.9E-19 164.3 11.1 95 91-225 267-373 (386)
52 4h8s_A DCC-interacting protein 99.6 5.1E-15 1.7E-19 165.3 10.0 95 91-226 299-400 (407)
53 1qqg_A IRS-1, insulin receptor 99.5 8.6E-15 2.9E-19 154.7 10.3 97 91-226 8-114 (264)
54 1dro_A Beta-spectrin; cytoskel 99.5 7E-15 2.4E-19 136.8 8.4 103 91-225 6-120 (122)
55 2q13_A DCC-interacting protein 99.5 1.3E-14 4.6E-19 160.8 11.3 93 92-225 277-376 (385)
56 3lju_X ARF-GAP with dual PH do 99.5 4.6E-14 1.6E-18 156.8 11.8 93 92-224 145-246 (386)
57 3tca_A Amyloid beta A4 precurs 99.5 9.7E-14 3.3E-18 147.1 11.9 95 89-223 164-275 (291)
58 3pp2_A RHO GTPase-activating p 99.4 3.9E-13 1.3E-17 125.9 12.1 106 91-224 6-123 (124)
59 2rov_A RHO-associated protein 99.4 1E-13 3.6E-18 129.0 7.9 94 94-224 2-115 (117)
60 2dtc_A RAL guanine nucleotide 99.4 1.2E-12 4E-17 123.3 14.0 103 94-227 2-115 (126)
61 2ys3_A UNC-112-related protein 99.4 2.5E-13 8.5E-18 128.5 8.6 96 91-224 7-112 (137)
62 4bbk_A Kindlin-1, fermitin fam 99.4 2.4E-12 8.1E-17 123.4 11.4 96 91-224 24-129 (165)
63 2fjl_A 1-phosphatidylinositol- 99.4 5E-12 1.7E-16 121.7 12.8 128 94-224 2-148 (150)
64 4f7h_A Fermitin family homolog 99.3 1.9E-11 6.6E-16 118.3 11.9 96 92-225 46-151 (173)
65 2d9w_A Docking protein 2; PH d 99.2 6.1E-11 2.1E-15 110.2 12.5 96 91-223 10-120 (127)
66 4ejn_A RAC-alpha serine/threon 99.2 1.5E-11 5.2E-16 137.8 9.9 95 91-225 4-109 (446)
67 1w1g_A HPDK1, 3-phosphoinositi 99.1 1.3E-10 4.4E-15 111.8 10.4 93 90-226 49-141 (151)
68 3a8n_A TIAM-1, T-lymphoma inva 99.1 6.8E-11 2.3E-15 125.4 8.7 102 91-226 9-126 (279)
69 3hk0_A Growth factor receptor- 99.1 8.4E-10 2.9E-14 115.8 12.9 95 90-224 129-240 (256)
70 4gmv_A RAS-associated and plec 99.0 6.2E-10 2.1E-14 118.1 11.6 97 91-224 156-266 (281)
71 2coa_A Protein kinase C, D2 ty 98.4 7.2E-07 2.5E-11 82.9 9.8 95 90-224 5-119 (125)
72 3tfm_A Myosin X; split PH doma 98.4 2.2E-07 7.6E-12 95.7 5.7 41 89-129 17-57 (228)
73 2d9z_A Protein kinase C, NU ty 98.3 5.9E-06 2E-10 77.0 13.0 94 91-224 6-123 (129)
74 2lg1_A A-kinase anchor protein 97.7 0.00023 7.9E-09 71.0 11.3 104 91-228 69-176 (185)
75 1mai_A Phospholipase C delta-1 97.5 0.00055 1.9E-08 64.3 10.8 39 189-227 84-124 (131)
76 3mpx_A FYVE, rhogef and PH dom 97.3 0.00045 1.6E-08 77.0 9.7 94 93-226 244-339 (434)
77 1v61_A RAC/CDC42 guanine nucle 97.3 0.00096 3.3E-08 63.1 10.3 85 107-228 42-130 (132)
78 1zc3_B Exocyst complex protein 97.3 0.0036 1.2E-07 57.4 13.0 97 93-225 8-108 (113)
79 1v5m_A SH2 and PH domain-conta 97.3 0.0014 4.7E-08 61.4 10.1 96 90-225 15-131 (136)
80 3qwm_A Iqsec1, IQ motif and SE 97.2 0.0018 6.1E-08 61.7 11.0 90 106-229 30-127 (140)
81 3t06_A PDZ-rhogef, RHO guanine 97.2 0.0024 8.1E-08 70.9 13.6 112 92-226 294-410 (418)
82 3ml4_A Protein DOK-7; tyrosine 97.1 0.0012 4.3E-08 67.0 9.2 94 92-223 8-112 (224)
83 3p6a_A RHO guanine nucleotide 97.1 0.0042 1.4E-07 67.8 14.0 112 92-226 258-373 (377)
84 2vrw_B P95VAV, VAV1, proto-onc 97.1 0.0026 8.9E-08 70.4 12.2 97 92-227 233-338 (406)
85 1xcg_A PDZ-rhogef, RHO guanine 97.0 0.0053 1.8E-07 66.9 14.0 111 92-225 252-367 (368)
86 2dfk_A Collybistin II; DH doma 97.0 0.0034 1.2E-07 69.5 12.6 101 92-228 256-367 (402)
87 2pz1_A RHO guanine nucleotide 97.0 0.0037 1.3E-07 70.5 12.8 101 92-228 333-444 (466)
88 3ky9_A Proto-oncogene VAV; cal 96.9 0.0033 1.1E-07 73.2 11.5 96 93-227 406-510 (587)
89 3odw_A RHO guanine nucleotide 96.9 0.0063 2.1E-07 70.2 13.5 114 91-227 410-527 (536)
90 1dbh_A Protein (human SOS 1); 96.8 0.0053 1.8E-07 66.5 11.6 101 92-225 246-350 (354)
91 1kz7_A Guanine nucleotide exch 96.7 0.012 4.1E-07 64.0 13.3 105 92-226 209-327 (353)
92 1txd_A RHO guanine nucleotide 96.7 0.011 3.6E-07 65.0 12.8 114 92-228 256-373 (385)
93 1nty_A Triple functional domai 96.3 0.024 8.3E-07 60.2 12.3 100 92-225 202-309 (311)
94 2rgn_B RHOA/RAC/CDC42 exchange 95.8 0.057 2E-06 58.6 12.7 102 93-225 207-319 (354)
95 3jzy_A Intersectin 2; C2 domai 95.6 0.002 6.9E-08 73.0 0.0 108 93-226 253-364 (510)
96 2z0q_A XPLN, RHO guanine nucle 95.6 0.047 1.6E-06 58.8 10.7 93 93-224 232-346 (346)
97 1foe_A T-lymphoma invasion and 93.5 0.55 1.9E-05 51.1 12.9 58 170-227 300-369 (377)
98 3ksy_A SOS-1, SON of sevenless 93.3 0.2 7E-06 62.1 10.0 100 92-224 443-546 (1049)
99 3v5w_A G-protein coupled recep 91.7 1 3.6E-05 53.2 12.8 95 92-228 558-656 (689)
100 2rr3_B OSBP, oxysterol-binding 91.2 0.093 3.2E-06 39.4 2.0 22 347-368 10-31 (47)
101 1fho_A UNC-89; pleckstrin homo 87.4 0.95 3.2E-05 41.7 6.3 102 89-226 6-114 (119)
102 3zvr_A Dynamin-1; hydrolase, D 86.8 3.7 0.00013 49.2 12.5 90 93-222 540-643 (772)
103 1z87_A Alpha-1-syntrophin; pro 84.7 2.2 7.5E-05 44.6 8.2 52 173-224 205-262 (263)
104 3qr0_A Phospholipase C-beta (P 84.6 2.9 9.8E-05 50.5 10.2 36 190-225 103-143 (816)
105 2adz_A Alpha-1-syntrophin; pro 84.5 1.8 6.2E-05 42.6 7.0 52 173-224 120-177 (178)
106 3ohm_B 1-phosphatidylinositol- 75.7 9.6 0.00033 46.3 10.7 38 188-225 98-140 (885)
107 2zkm_X 1-phosphatidylinositol- 73.2 7.3 0.00025 46.9 8.8 37 190-226 96-137 (799)
108 3hie_A Protein PSL1, exocyst c 45.1 1.1E+02 0.0036 29.9 9.6 39 188-227 113-151 (171)
109 3ulb_A Target of rapamycin com 28.7 2E+02 0.007 26.3 8.1 53 174-226 57-116 (121)
110 3a58_A Exocyst complex compone 26.6 2.3E+02 0.008 29.9 9.2 39 188-227 183-221 (320)
111 3sbu_A Hypothetical NTF2-like 26.1 47 0.0016 34.1 3.8 41 574-614 205-248 (261)
112 3e7k_A TRPM7 channel; coiled-c 23.9 1.6E+02 0.0054 23.5 5.6 50 243-296 6-55 (56)
No 1
>1zhx_A KES1 protein; oxysterol,sterol binding protein, lipid binding protein; HET: HC3; 1.50A {Saccharomyces cerevisiae} SCOP: d.338.1.1 PDB: 1zht_A* 1zhw_A* 1zhy_A* 1zhz_A* 3spw_A* 1zi7_A
Probab=100.00 E-value=3.1e-75 Score=652.52 Aligned_cols=307 Identities=21% Similarity=0.350 Sum_probs=269.7
Q ss_pred CCchhHHHhhhccC---CCCCCcccccccccccChhHhhhhcccchHHHHHHHhcC-------CCCC------HHHHHHH
Q 003839 426 KGVSLWAMIKDNIG---KDLTKICLPVYFNEPLSSLQKCFEELEYSYLIDRAYEWG-------KRGN------TLMRILN 489 (792)
Q Consensus 426 ~~~~lwsilK~~iG---kDLtkIsLPv~~~EP~S~LQrl~e~~ey~~lLd~Aa~~~-------~~~d------~~eRm~~ 489 (792)
.++++|+++.++|| ||||+|+|||+||||+|+||+++++|+|++||+.|+... +..| |++||++
T Consensus 9 ~~~s~w~~~lK~i~k~g~DLSkIslPv~i~EP~SlLE~~~~~~e~~dLL~~aa~~~~~~~~a~~~~D~~~~~~p~eRm~~ 88 (438)
T 1zhx_A 9 ASSSSWTSFLKSIASFNGDLSSLSAPPFILSPISLTEFSQYWAEHPELFLEPSFINDDNYKEHCLIDPEVESPELARMLA 88 (438)
T ss_dssp TTSHHHHHHHHTTTTCCSCGGGSCCCGGGEEEEEGGGGGGGGCSCHHHHHGGGGCCTTTGGGSCTTCTTCSCHHHHHHHH
T ss_pred ccccHHHHHHHHhhhcCCChhhcccCchhcCCccHHHHHHHhhhhHHHHhhhhhcccccccccccCCccccCCHHHHHHH
Confidence 46899975555564 599999999999999999999999999999999888631 1138 9999999
Q ss_pred HHHHHHhhccccc-------CCCCCCCCCCCCCeeEEEecC-----CC-EEEEEEe---------------CCeeEEEEE
Q 003839 490 VAAFAVSGYASTE-------GRICKPFNPLLGETYEADYPD-----KG-LQFFSEK---------------GTGWKFWGD 541 (792)
Q Consensus 490 V~aF~vS~~~~~~-------~r~kKPfNPiLGETfe~~~~d-----~g-~rf~aEQ---------------~~g~~~~g~ 541 (792)
|++|+||+|++.+ ++.+|||||||||||+|.|+| .| ++||||| ..||+++|+
T Consensus 89 V~af~lS~~~~~y~~~~~~~~~~kKPfNPiLGETFe~~~~d~~~~~~g~~~~iaEQVSHHPPISA~~~e~~~~g~~~~g~ 168 (438)
T 1zhx_A 89 VTKWFISTLKSQYCSRNESLGSEKKPLNPFLGELFVGKWENKEHPEFGETVLLSEQVSHHPPVTAFSIFNDKNKVKLQGY 168 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCCEEECCCTTCEEEEEECCTTCTTTCCEEEEEEEEEETTEEEEEEEEETTTTEEEEEE
T ss_pred HHHHHHhhhhhhcccccccccccccCcCCcccceEEEEecCccCCCCCcEEEEEEeccCCCCeeEEEEEcCCCCEEEEEE
Confidence 9999999997532 688999999999999999976 45 8999999 469999999
Q ss_pred eeeeEEEEee-EEEEEeceEEEEEecCCcEEEEeecceeeeeeccceeeEeecceEEEEeCCcceEEEEEeecCccCCCC
Q 003839 542 SNLKSKFWGR-SIQLDPVGVLTLEFDDGEVFQWSKVTSSIYNLILGKLYCDHYGTMRIEGNREYSCKLKFKEQSIIDRNP 620 (792)
Q Consensus 542 ~~~kskF~G~-Si~v~~~G~~~l~f~~gE~Y~~~~p~~~i~nii~G~~~ie~~G~~~I~~~tg~~a~i~F~~k~~fg~~~ 620 (792)
+.+++||+|+ ||+|.+.|.++|+|. ||+|+|++|+++|+|||+|++|+|++|+|.|+|+||++|+|+|+++|||||+.
T Consensus 169 ~~~kskF~G~~Sv~v~~~G~~~l~l~-~E~Y~~t~P~~~v~gIi~G~~~vE~~G~~~I~~~tg~~~~l~F~~kg~f~g~~ 247 (438)
T 1zhx_A 169 NQIKASFTKSLMLTVKQFGHTMLDIK-DESYLVTPPPLHIEGILVASPFVELEGKSYIQSSTGLLCVIEFSGRGYFSGKK 247 (438)
T ss_dssp EEEEEEECTTCCEEEEEECCEEEEET-TEEEEEECCCEEEECTTTTCCEEEECSEEEEEETTSCEEEEEEECSSSSCSSS
T ss_pred eeeEEEEcCceEEEEEcceEEEEEEC-CcEEEEecCcEEEEEEEecceeEecCCeEEEEcCCCCEEEEEEcCCCCcCCCc
Confidence 9999999999 999999999999998 99999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEEEcC------CCcEEEEEEeEecceEEEEecccCCCCcccccCCccEEEEeeCCCCCCCCccCcccceeeccCC
Q 003839 621 HQVHGIVQDR------NGKTVATLFGKWDESIHYVIGECSGKGKELESLSEACLLWKRSKPPKYPTRYNFTRFAITLNEV 694 (792)
Q Consensus 621 ~~V~G~V~d~------~g~~~~~i~G~Wd~~l~~~~~~~~~~~~~~~~~~~~~~lW~~~~~p~~~~~y~ft~fai~lNe~ 694 (792)
|.|+|+|++. +|+++|+|.|+|++.|++.+.... ....++|+++..+... + .+
T Consensus 248 n~v~G~I~~~~~~~~~~~~~l~~i~G~W~~~l~i~~~~~~---------~~~~~~~~~~~~~~~~-------~-----~v 306 (438)
T 1zhx_A 248 NSFKARIYKDSKDSKDKEKALYTISGQWSGSSKIIKANKK---------EESRLFYDAARIPAEH-------L-----NV 306 (438)
T ss_dssp SEEEEEEESSTTGGGCGGGCSEEEEEETTSEEEEEETTCG---------GGCEEEEETTTSCCCC-------C-----BC
T ss_pred cEEEEEEEcCCcccCCCCcEEEEEEEEEcceEEEEeCCCC---------ccceEEeccCCCCCcc-------c-----cC
Confidence 9999999984 678999999999999999765420 1257899998765411 1 23
Q ss_pred CccccCCCCCCCCcc--hhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHhcc---CCCccceeEEcCC
Q 003839 695 TPGLKEKLPPTDSRL--RPDQRCLENGEYEMANSEKLRLEQRQRQARKMQE---NGWKPRWFAKDRA 756 (792)
Q Consensus 695 ~p~~~~~l~pTDSR~--R~D~raLe~Gd~d~A~~eK~rLEe~QR~~Rk~re---~~w~Pk~F~k~~~ 756 (792)
.| .+.++|||||+ |||++||++||++.|+++|.+|||+||++||+|+ ..|+||||++..+
T Consensus 307 ~p--~e~q~ptdSR~~Wr~d~~ale~Gd~d~A~~eK~rLEe~QR~~rk~re~~g~~w~Pr~F~~~~~ 371 (438)
T 1zhx_A 307 KP--LEEQHPLESRKAWYDVAGAIKLGDFNLIAKTKTELEETQRELRKEEEAKGISWQRRWFKDFDY 371 (438)
T ss_dssp CC--GGGCCTTBHHHHTHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCSSEEEEEC
T ss_pred CC--hhhCCCcccchhhHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccceEEECCc
Confidence 33 35689999997 8999999999999999999999999999998764 5799999998744
No 2
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=99.86 E-value=6.6e-22 Score=175.51 Aligned_cols=93 Identities=34% Similarity=0.604 Sum_probs=84.2
Q ss_pred cceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCc
Q 003839 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (792)
Q Consensus 93 ~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p 172 (792)
+.++|||+|+++..|+||+|||||+++.|+||+++.+. ...|
T Consensus 1 V~k~G~L~K~g~~~k~WkkR~FvL~~~~L~Yy~~~~~~--------------------------------------~~~~ 42 (94)
T 2rsg_A 1 VERCGVLSKWTNYIHGWQDRWVVLKNNALSYYKSEDET--------------------------------------EYGC 42 (94)
T ss_dssp CCEEEEEEEESSSTTCEEEEEEEEETTEEEEESSTTGG--------------------------------------GTCC
T ss_pred CCEEEEEEEeCCCCCCceEEEEEEECCEEEEEEecccc--------------------------------------cccc
Confidence 36899999999999999999999999999999975431 1247
Q ss_pred ceEEEcCceEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003839 173 FGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (792)
Q Consensus 173 ~G~I~L~~ssi~~~~~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~ 223 (792)
.|.|+|..+.+..+..+++.|.|.+++|+|+|+|+|.+|+++||+||+.|+
T Consensus 43 ~~~i~l~~~~~~~~~~~~~~F~i~~~~r~~~l~A~s~~e~~~Wi~aLq~Ak 93 (94)
T 2rsg_A 43 RGSICLSKAVITPHDFDECRFDISVNDSVWYLRAQDPDHRQQWIDAIEQHK 93 (94)
T ss_dssp SEEEETTTCEEEECSSCSSEEEEEETTEEEEEECCSSCCTHHHHHHHHHHC
T ss_pred eeeEecceeeeecCcccceeEEEEeCCeEEEEECCCHHHHHHHHHHHHhhc
Confidence 899999999999888889999999999999999999999999999999885
No 3
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=99.83 E-value=1.3e-20 Score=169.66 Aligned_cols=96 Identities=33% Similarity=0.738 Sum_probs=84.6
Q ss_pred eEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCcce
Q 003839 95 ISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFG 174 (792)
Q Consensus 95 ~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p~G 174 (792)
++|||+|+++..++||+|||||.++.|+||+++.+. ...|+|
T Consensus 1 ~eG~L~K~g~~~k~Wk~R~fvL~~~~L~Yy~~~~~~--------------------------------------~~~~~g 42 (103)
T 3rcp_A 1 MEGVLYKWTNYLTGWQPRWFVLDNGILSYYDSQDDV--------------------------------------CKGSKG 42 (103)
T ss_dssp CEEEEEEECCTTTCEEEEEEEEETTEEEEESSCC-----------------------------------------CCCSC
T ss_pred CceEEEEccCCCCCeeceEEEEECCEEEEEecCCcc--------------------------------------cCCccc
Confidence 589999999999999999999999999999976531 124789
Q ss_pred EEEcCceEEEecCCCCCcEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 003839 175 EVHLKVSSIRDSKSDDKRFSIFTG-TKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (792)
Q Consensus 175 ~I~L~~ssi~~~~~d~~~F~I~t~-~k~~~L~A~s~~dr~~Wi~aL~~a~~~~~~ 228 (792)
.|+|..++|.....+++.|.|.++ .++|+|+|+|.+|+++||.||+.|+..+..
T Consensus 43 ~i~L~~~~v~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~~~~~ 97 (103)
T 3rcp_A 43 SIKMAVCEIKVHSADNTRMELIIPGEQHFYMKAVNAAERQRWLVALGSSKASLTD 97 (103)
T ss_dssp EEEGGGCEEECCTTCSSEEEEEETTTEEEEEECSSHHHHHHHHHHHHTTSCCCCC
T ss_pred EEEeeeeEEEEcCCCCceEEEEeCCCCEEEEECCCHHHHHHHHHHHHHHHHhccC
Confidence 999999999888788999999986 799999999999999999999999877543
No 4
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=7.9e-20 Score=169.63 Aligned_cols=102 Identities=29% Similarity=0.561 Sum_probs=88.5
Q ss_pred CCCcceEEEEEeecCCCCCceeeEEEEe--CCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccc
Q 003839 90 IVGNGISGVLYKWVNYGKGWRPRWFVLQ--DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRL 167 (792)
Q Consensus 90 ~~~~~~~G~L~K~~n~~kgWk~RwFVL~--~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~ 167 (792)
...+.++|||+|+++..++||+|||||. ++.|+||+++.+.
T Consensus 5 ~~~~~~~G~L~K~~~~~~~Wk~R~fvL~~~~~~L~Yyk~~~~~------------------------------------- 47 (120)
T 2d9x_A 5 SSGENVYGYLMKYTNLVTGWQYRFFVLNNEAGLLEYFVNEQSR------------------------------------- 47 (120)
T ss_dssp CSCCCCEEEEEEEEETTTEEEEEEEEECTTTCEEEEESSGGGS-------------------------------------
T ss_pred CCCCcEEEEEEecCCCCCCceEEEEEEECCCCEEEEEecCccc-------------------------------------
Confidence 3467899999999999999999999997 6999999975431
Q ss_pred cCCCcceEEEcCceEEEecCCCCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhcccc
Q 003839 168 LNRKPFGEVHLKVSSIRDSKSDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDMFPRM 229 (792)
Q Consensus 168 ~~~~p~G~I~L~~ssi~~~~~d~~~F~I~t~~-k~~~L~A~s~~dr~~Wi~aL~~a~~~~~~~ 229 (792)
..+|+|.|+|..++|.....+.+.|.|.+++ |+|+|+|+|.+|+++||+||+.|+......
T Consensus 48 -~~~~~g~I~L~~~~v~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~~ 109 (120)
T 2d9x_A 48 -NQKPRGTLQLAGAVISPSDEDSHTFTVNAASGEQYKLRATDAKERQHWVSRLQICTQHHTEA 109 (120)
T ss_dssp -SSCCSEEEECTTCCEECCSSSSSCEEECCSSSCCEEECCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCccceEEcceEEEEecCCCCCEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHHhhhh
Confidence 1248899999999988777778999999986 999999999999999999999999876653
No 5
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.79 E-value=7.2e-19 Score=163.20 Aligned_cols=100 Identities=23% Similarity=0.464 Sum_probs=85.6
Q ss_pred CCCcceEEEEEeecC--CCCCceeeEEEEeCC--eEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccc
Q 003839 90 IVGNGISGVLYKWVN--YGKGWRPRWFVLQDG--VLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQ 165 (792)
Q Consensus 90 ~~~~~~~G~L~K~~n--~~kgWk~RwFVL~~g--~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~ 165 (792)
...+.++|||+|++. ..++||+|||||.++ .|+||+++.+
T Consensus 5 ~~~~~~~G~L~K~g~~~~~k~WkkRwfvL~~~~~~L~Yy~~~~~------------------------------------ 48 (119)
T 2dhk_A 5 SSGKKLCGYLSKFGGKGPIRGWKSRWFFYDERKCQLYYSRTAQD------------------------------------ 48 (119)
T ss_dssp CSCCCCEEEEEECSCSSSSCCCEEEEEEEETTTTEEEEESSTTC------------------------------------
T ss_pred CCCCcEEEEEEecCCCCCCCCceeEEEEEECCccEEEEECCCCC------------------------------------
Confidence 356789999999986 789999999999988 9999997543
Q ss_pred cccCCCcceEEEcCceEEEecC-CCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcccc
Q 003839 166 RLLNRKPFGEVHLKVSSIRDSK-SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPRM 229 (792)
Q Consensus 166 ~~~~~~p~G~I~L~~ssi~~~~-~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~~~~ 229 (792)
.+|+|.|+|..+++.... .....|.|.++.|+|+|+|+|.+|+++||+||+.|+..+...
T Consensus 49 ----~~~~g~I~L~~~~~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~~ 109 (119)
T 2dhk_A 49 ----ANPLDSIDLSSAVFDCKADAEEGIFEIKTPSRVITLKAATKQAMLYWLQQLQMKRWEFHNS 109 (119)
T ss_dssp ----CSCSEEEEGGGCEEEECTTGGGCEEEEECSSCCEEEECSSHHHHHHHHHHHHHHHHHHHHS
T ss_pred ----cccccEEECCCCEEEecCCCCCCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHHhcCC
Confidence 247899999998876542 336789999999999999999999999999999999877553
No 6
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.79 E-value=4.6e-19 Score=168.14 Aligned_cols=96 Identities=28% Similarity=0.352 Sum_probs=80.7
Q ss_pred CCCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccC
Q 003839 90 IVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (792)
Q Consensus 90 ~~~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~ 169 (792)
...+.++|||+|++ .+++||+|||||++++|+|||++.+
T Consensus 5 ~~~v~k~GwL~K~g-~~k~WkrRWfVLk~~~L~yyk~~~~---------------------------------------- 43 (130)
T 1v88_A 5 SSGIVMADWLKIRG-TLKSWTKLWCVLKPGVLLIYKTQKN---------------------------------------- 43 (130)
T ss_dssp SSSCCEEEEEEECC-SSSSCEEEEEEEETTEEEEESCSSS----------------------------------------
T ss_pred CCceEEEeEEEEeC-CCCCceEEEEEEECCEEEEECCCCC----------------------------------------
Confidence 34568999999988 8899999999999999999997653
Q ss_pred CCcceEEEcCceEEEecCCC--CCcEEEEeCC------------------------eEEEEEcCCHHHHHHHHHHHHHHH
Q 003839 170 RKPFGEVHLKVSSIRDSKSD--DKRFSIFTGT------------------------KRLHLRAETREDRFAWMEALQAVK 223 (792)
Q Consensus 170 ~~p~G~I~L~~ssi~~~~~d--~~~F~I~t~~------------------------k~~~L~A~s~~dr~~Wi~aL~~a~ 223 (792)
..|.|.|.|..++|.+..+. .++|.|.++. ++|+|+|+|++|+++||+||+.|+
T Consensus 44 ~~p~G~I~L~~~~v~~~~~~~~~~~F~i~~~~~~~i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~ 123 (130)
T 1v88_A 44 GQWVGTVLLNACEIIERPSKKDGFCFKLFHPLEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELAL 123 (130)
T ss_dssp CCCCEEEECSSCEECCCCTTTSSCEEEEECTTCCCCSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHH
T ss_pred CCceEEEEcCCCEEEECCCCCCCeEEEEEcCCccccccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHHHH
Confidence 24889999999998654433 3688898753 349999999999999999999998
Q ss_pred Hhc
Q 003839 224 DMF 226 (792)
Q Consensus 224 ~~~ 226 (792)
..-
T Consensus 124 ~~~ 126 (130)
T 1v88_A 124 KSG 126 (130)
T ss_dssp TTT
T ss_pred hcC
Confidence 753
No 7
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.78 E-value=7e-19 Score=170.74 Aligned_cols=96 Identities=13% Similarity=0.189 Sum_probs=81.9
Q ss_pred CCCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccC
Q 003839 90 IVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (792)
Q Consensus 90 ~~~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~ 169 (792)
..++.++|||+|++...++||+|||||+++.|+|||++.+.
T Consensus 15 ~~pv~keG~L~Kkg~~~k~WkrRWFvLk~~~L~Yyk~~~d~--------------------------------------- 55 (149)
T 1x1f_A 15 ALPLYFEGFLLIKRSGYREYEHYWTELRGTTLFFYTDKKSI--------------------------------------- 55 (149)
T ss_dssp SSCEEEEEEEEEECTTCCSCEEEEEEEETTEEEEESCSSCS---------------------------------------
T ss_pred CCCccEEEEEEEeCCCCCCceeEEEEEcCCEEEEEeCCCcc---------------------------------------
Confidence 34588999999999999999999999999999999976541
Q ss_pred CCcceEEEcCceEEEec--CC--CCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 170 RKPFGEVHLKVSSIRDS--KS--DDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 170 ~~p~G~I~L~~ssi~~~--~~--d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
.+.|.|+|..+++... .. ..+.|.|.++.++|+|+|+|.+||++||.||+.++..
T Consensus 56 -~~~g~I~L~~~~~~~~~~~~~~~~~~F~I~t~~r~~~f~A~s~ee~~eWi~aI~~v~~~ 114 (149)
T 1x1f_A 56 -IYVDKLDIVDLTCLTEQNSTEKNCAKFTLVLPKEEVQLKTENTESGEEWRGFILTVTEL 114 (149)
T ss_dssp -SCSEECCCSSCCEEEECCCTTSCCCEEEEECSSCCEEEECSSHHHHHHHHHHHHHHHHS
T ss_pred -ccCcEEECCCceEEeeccCCCCcCcEEEEEcCCCEEEEEcCCHHHHHHHHHHHHHHHcc
Confidence 3679999998876532 11 2468999999999999999999999999999999875
No 8
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.77 E-value=3.9e-18 Score=156.93 Aligned_cols=98 Identities=21% Similarity=0.369 Sum_probs=84.5
Q ss_pred CCCcceEEEEEeecCCC-CCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhccccccccccccc
Q 003839 90 IVGNGISGVLYKWVNYG-KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (792)
Q Consensus 90 ~~~~~~~G~L~K~~n~~-kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~ 168 (792)
..++.++|||+|++... +.|++|||||+++.|+||+++..
T Consensus 7 ~~~~~~~G~L~K~~~~~~k~WkkR~fvL~~~~L~yyk~~~~--------------------------------------- 47 (114)
T 2da0_A 7 GYGSEKKGYLLKKSDGIRKVWQRRKCSVKNGILTISHATSN--------------------------------------- 47 (114)
T ss_dssp CCCSCEEEEEEEECSSSCCCEEEEEEEEETTEEEECCSSCC---------------------------------------
T ss_pred CCCccEEEEEEEeCCCCCCCceeEEEEEeCCEEEEEcCCCC---------------------------------------
Confidence 35678999999998755 99999999999999999997432
Q ss_pred CCCcceEEEcCceEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 003839 169 NRKPFGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (792)
Q Consensus 169 ~~~p~G~I~L~~ssi~~~~~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~~~ 228 (792)
.+.|.|.|..+.+.........|.|.++.|+|+|+|+|.+|+.+||.||+.|+....+
T Consensus 48 --~~~~~i~l~~~~v~~~~~~~~~F~I~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~~ 105 (114)
T 2da0_A 48 --RQPAKLNLLTCQVKPNAEDKKSFDLISHNRTYHFQAEDEQDYVAWISVLTNSKEEALT 105 (114)
T ss_dssp --SCCEEEETTTSEEEECSSSSSCEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHHHHT
T ss_pred --CCCCEEEeeeeEEEECCCCCCEEEEEcCCcEEEEEcCCHHHHHHHHHHHHHHHHHHHH
Confidence 2457888888888776666789999999999999999999999999999999987544
No 9
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.76 E-value=6.2e-18 Score=155.15 Aligned_cols=96 Identities=23% Similarity=0.329 Sum_probs=81.9
Q ss_pred CCcceEEEEEeecC-CCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccC
Q 003839 91 VGNGISGVLYKWVN-YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (792)
Q Consensus 91 ~~~~~~G~L~K~~n-~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~ 169 (792)
..+.++|||+|++. ..++||+|||||.++.|+||+++.+
T Consensus 6 ~~~~~~G~L~K~~~~~~~~WkkR~fvL~~~~L~yy~~~~~---------------------------------------- 45 (115)
T 2cod_A 6 SGKVKSGWLDKLSPQGKRMFQKRWVKFDGLSISYYNNEKE---------------------------------------- 45 (115)
T ss_dssp SCCCEEEEEEECCSSSSSCCEEEEEEECSSEEEEEESSCC----------------------------------------
T ss_pred CCccEEEEEEEcCCCCCCCCceEEEEEECCEEEEEcCCCC----------------------------------------
Confidence 45689999999987 7899999999999999999997543
Q ss_pred CCcceEEEcCceEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 003839 170 RKPFGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (792)
Q Consensus 170 ~~p~G~I~L~~ssi~~~~~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~~ 227 (792)
..|+|.|+|..++.... .++..|.|.++.|+|+|+|+|.+|+++||.||+.++...+
T Consensus 46 ~~~~g~i~l~~~~~v~~-~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~~l~~~~~~~~ 102 (115)
T 2cod_A 46 MYSKGIIPLSAISTVRV-QGDNKFEVVTTQRTFVFRVEKEEERNDWISILLNALKSQS 102 (115)
T ss_dssp SSCCCEEETTTEEEEEE-ETTTEEEEEESSCCEEEECSSHHHHHHHHHHHHHHHHHHS
T ss_pred cccCCEEECCcceEEEe-CCCCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHhCc
Confidence 23789999998753222 2378999999999999999999999999999999986544
No 10
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.76 E-value=7.4e-18 Score=153.17 Aligned_cols=95 Identities=22% Similarity=0.368 Sum_probs=81.4
Q ss_pred CCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCC
Q 003839 91 VGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (792)
Q Consensus 91 ~~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (792)
..+.++|||+|+++..++|++|||||.++.|+||+++.+ .
T Consensus 6 ~~~~~~G~L~K~~~~~~~Wk~RwfvL~~~~L~yyk~~~~----------------------------------------~ 45 (109)
T 1wgq_A 6 SGSTMSGYLYRSKGSKKPWKHLWFVIKNKVLYTYAASED----------------------------------------V 45 (109)
T ss_dssp CSCSCEEEEEEESSTTSCCEEEEEEEETTEEEEESCTTC----------------------------------------S
T ss_pred CCCeEEEEEEeCCCCCCCceeEEEEEeCCEEEEECCCCc----------------------------------------C
Confidence 466899999999999999999999999999999997543 2
Q ss_pred CcceEEEcCceEEEecCCC---CCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 171 KPFGEVHLKVSSIRDSKSD---DKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 171 ~p~G~I~L~~ssi~~~~~d---~~~F~I~t~~-k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
.|.|.|+|..+++...... ++.|.|.++. ++|+|+|+|.+|+..||.||+.|...
T Consensus 46 ~~~~~i~L~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~a~s~~e~~~Wi~al~~a~~~ 104 (109)
T 1wgq_A 46 AALESQPLLGFTVTLVKDENSESKVFQLLHKGMVFYVFKADDAHSTQRWIDAFQEGTVS 104 (109)
T ss_dssp SCSEEEECSSEEEEECCCSSCSSSEEEEEETTEEEEEEECSSHHHHHHHHHHHHHHHSC
T ss_pred ccCceEECCCCEEEECCCCCCCCcEEEEEeCCCeEEEEECCCHHHHHHHHHHHHHHhcc
Confidence 3789999999987765432 4679998875 67999999999999999999998753
No 11
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=99.76 E-value=3.2e-18 Score=160.25 Aligned_cols=95 Identities=17% Similarity=0.354 Sum_probs=80.3
Q ss_pred cceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCc
Q 003839 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (792)
Q Consensus 93 ~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p 172 (792)
++++|||+|++++.++|++|||||.++.|+|||++... +...|
T Consensus 6 ~~k~G~L~Kk~~~~k~W~~rwfVL~~~~L~yyK~~~~~-------------------------------------~d~~P 48 (120)
T 4a6h_A 6 EIKSGFLERRSKFLKSYSKGYYVLTPNFLHEFKTADRK-------------------------------------KDLVP 48 (120)
T ss_dssp CSEEEEEEEEETTTTEEEEEEEEECSSEEEEESSCCTT-------------------------------------TCCSC
T ss_pred ccEEEEEEEcCCCCCCCccEEEEEeCCEEEEEcCCCcC-------------------------------------cCCCc
Confidence 79999999999999999999999999999999975431 12358
Q ss_pred ceEEEcCceEEEecCC-----------CCCcEEEEeCC-------eEEEEEcCCHHHHHHHHHHHHHHHH
Q 003839 173 FGEVHLKVSSIRDSKS-----------DDKRFSIFTGT-------KRLHLRAETREDRFAWMEALQAVKD 224 (792)
Q Consensus 173 ~G~I~L~~ssi~~~~~-----------d~~~F~I~t~~-------k~~~L~A~s~~dr~~Wi~aL~~a~~ 224 (792)
.|.|.|..|+|..... ....|.|.+.. ++|+|+|+|.+||++||+||+.+..
T Consensus 49 ~gsI~L~~c~v~~~~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~~ 118 (120)
T 4a6h_A 49 VMSLALSECTVTEHSRKNSTSSPNSTGSDAKFVLHAKQNGIIRRGHNWVFKADSYESMMSWFDNLKILTS 118 (120)
T ss_dssp SEEEEGGGEEEEEECCCCC---------CCEEEEEESSSSSSCTTCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred eEEEECCCCEEEEcccccccccccccCCCcEEEEEeCCCCcccCceEEEEEcCCHHHHHHHHHHHHHHhc
Confidence 9999999999987332 35689988754 5899999999999999999998854
No 12
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.75 E-value=5.1e-18 Score=155.44 Aligned_cols=96 Identities=23% Similarity=0.412 Sum_probs=81.6
Q ss_pred CCCcceEEEEEeecCCCCCceeeEEEEe--CCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccc
Q 003839 90 IVGNGISGVLYKWVNYGKGWRPRWFVLQ--DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRL 167 (792)
Q Consensus 90 ~~~~~~~G~L~K~~n~~kgWk~RwFVL~--~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~ 167 (792)
...+.++|||+|++...++||+|||||. ++.|+||+++.+
T Consensus 5 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yy~~~~~-------------------------------------- 46 (117)
T 1v5u_A 5 SSGRSYEGILYKKGAFMKPWKARWFVLDKTKHQLRYYDHRMD-------------------------------------- 46 (117)
T ss_dssp CCSSSEEEEEEECCCSSSCCEEEEEEEETTTTEEEEESSSSC--------------------------------------
T ss_pred cCCccEEEEEEecCCCCCCceeeEEEEECCCCEEEEeecCCC--------------------------------------
Confidence 3567899999999998999999999999 899999997543
Q ss_pred cCCCcceEEEcCceEEEecC----------CCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 168 LNRKPFGEVHLKVSSIRDSK----------SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 168 ~~~~p~G~I~L~~ssi~~~~----------~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
..|+|.|+|..+++.... ...+.|.|.++.|+|+|+|+|.+|+++||+||+.|+..
T Consensus 47 --~~~~g~i~L~~~~~v~~~~~~~~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~ 112 (117)
T 1v5u_A 47 --TECKGVIDLAEVEAVAPGTPTIGAPKTVDEKAFFDVKTTRRVYNFCAQDVPSAQQWVDRIQSCLSS 112 (117)
T ss_dssp --SSCCCEEEGGGEEEEECCCCCTTSCSSSCTTTCEEEEESSCEEEEECSSHHHHHHHHHHHHTTCCC
T ss_pred --CccceEEEccCcEEEeecCccccccccCCCCeEEEEECCCceEEEECCCHHHHHHHHHHHHHHhcc
Confidence 237899999988754421 12468999999999999999999999999999998764
No 13
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.75 E-value=8.7e-18 Score=153.52 Aligned_cols=96 Identities=24% Similarity=0.352 Sum_probs=82.2
Q ss_pred CcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCC
Q 003839 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (792)
Q Consensus 92 ~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (792)
.+.++|||+|++...++|++|||||.++.|+||+++.+ ..
T Consensus 4 ~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~----------------------------------------~~ 43 (113)
T 1pls_A 4 KRIREGYLVKKGSVFNTWKPMWVVLLEDGIEFYKKKSD----------------------------------------NS 43 (113)
T ss_dssp CCSEEEEEEEESSSSSCCEEEEEEEETTEEEEESSTTC----------------------------------------SS
T ss_pred CCcEEEEEEEeCCCCCCceEEEEEEECCEEEEEeCCCC----------------------------------------CC
Confidence 46899999999999999999999999999999997543 24
Q ss_pred cceEEEcCceEEEe-c---CCCCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 003839 172 PFGEVHLKVSSIRD-S---KSDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDMFP 227 (792)
Q Consensus 172 p~G~I~L~~ssi~~-~---~~d~~~F~I~t~~-k~~~L~A~s~~dr~~Wi~aL~~a~~~~~ 227 (792)
|+|.|+|..+++.. . ......|.|.++. ++|+|+|+|.+|+++||.+|+.++....
T Consensus 44 ~~g~i~L~~~~~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~~~~~~ 104 (113)
T 1pls_A 44 PKGMIPLKGSTLTSPCQDFGKRMFVFKITTTKQQDHFFQAAFLEERDAWVRDINKAIKCIE 104 (113)
T ss_dssp CSEEEESSSCCEESSCCSSCCSSSEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHHHHHT
T ss_pred cceEEEcCCCEEEEecCCCCCCccEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHhccc
Confidence 78999999998754 1 1225689999886 8999999999999999999999998754
No 14
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.75 E-value=9.6e-18 Score=158.21 Aligned_cols=96 Identities=30% Similarity=0.498 Sum_probs=76.2
Q ss_pred CCCcceEEEEEeecCCCCCceeeEEEE-eCCeEEEEeecCCCccccchhhcccccccccchhhhhhhccccccccccccc
Q 003839 90 IVGNGISGVLYKWVNYGKGWRPRWFVL-QDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (792)
Q Consensus 90 ~~~~~~~G~L~K~~n~~kgWk~RwFVL-~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~ 168 (792)
...+.++|||+|+++..++||+||||| +++.|+||+++.+.
T Consensus 5 ~~~v~~~G~L~K~g~~~k~WkkRwFVL~~~~~L~Yyk~~~~~-------------------------------------- 46 (130)
T 2d9v_A 5 SSGLVRGGWLWRQSSILRRWKRNWFALWLDGTLGYYHDETAQ-------------------------------------- 46 (130)
T ss_dssp CCCEEEEEEEEEECSSSCCEEEEEEEEETTTEEEEESSSSTT--------------------------------------
T ss_pred CCceeEEEEEEeecCccCCceeeEEEEccCCEEEEEeCCCCC--------------------------------------
Confidence 345689999999999999999999999 89999999976531
Q ss_pred CCCcceEEEcCceE--EEe-----------cCCCCCcEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 169 NRKPFGEVHLKVSS--IRD-----------SKSDDKRFSIFTG-TKRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 169 ~~~p~G~I~L~~ss--i~~-----------~~~d~~~F~I~t~-~k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
.+.|.|.|.... |.. .....+.|.|.+. .|+|+|+|+|.+|+++||+||+.|+..
T Consensus 47 --~~~g~i~l~~~~~~i~~~~~~~~v~~~~~~~~~~~F~I~~~~~r~~~l~A~s~~e~~~Wi~al~~a~~~ 115 (130)
T 2d9v_A 47 --DEEDRVVIHFNVRDIKVGQECQDVQPPEGRSRDGLLTVNLREGSRLHLCAETRDDAIAWKTALMEANST 115 (130)
T ss_dssp --SEEEEEECTTTEEEEEEGGGCSSCCCCSSCCTTTEEEEEETTSCEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred --CcCceEecccceeEEeccccccccCCCCCCCcCcEEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHHcC
Confidence 255777665422 221 1123578999995 599999999999999999999999864
No 15
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.75 E-value=9.4e-18 Score=153.49 Aligned_cols=97 Identities=28% Similarity=0.372 Sum_probs=82.6
Q ss_pred CCCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccC
Q 003839 90 IVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (792)
Q Consensus 90 ~~~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~ 169 (792)
...+.++|||+|++...+.|++|||||.++.|+||+++.+
T Consensus 5 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~---------------------------------------- 44 (118)
T 1v89_A 5 SSGPIKMGWLKKQRSIVKNWQQRYFVLRAQQLYYYKDEED---------------------------------------- 44 (118)
T ss_dssp SSCEEEEEEEEEECSSSSCEEEEEEEEETTEEEEESSSSC----------------------------------------
T ss_pred CCCCcEEEEEEecCCCCCCccEEEEEEECCEEEEEeCCCC----------------------------------------
Confidence 3567899999999999999999999999999999997543
Q ss_pred CCcceEEEcCceEEEecC-----CCCCcEEEEe--------CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 003839 170 RKPFGEVHLKVSSIRDSK-----SDDKRFSIFT--------GTKRLHLRAETREDRFAWMEALQAVKDMF 226 (792)
Q Consensus 170 ~~p~G~I~L~~ssi~~~~-----~d~~~F~I~t--------~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~ 226 (792)
..|+|.|+|..+++.... .....|.|.+ +.++|+|+|+|.+|+++||.||+.|+..-
T Consensus 45 ~~~~g~i~L~~~~v~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~~ 114 (118)
T 1v89_A 45 TKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAGSG 114 (118)
T ss_dssp CSCSEEECSTTEEEEEECCCSSCCCCCEEEEEESCCSSCCSSCCCEEEECSSHHHHHHHHHHHHHHHHCC
T ss_pred CCceEEEECCCCEEEEcCcCcccCCcceEEEECCccccccCCCcEEEEECCCHHHHHHHHHHHHHHHccC
Confidence 247899999999876432 1256799988 67999999999999999999999998853
No 16
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=99.75 E-value=1.2e-17 Score=154.98 Aligned_cols=97 Identities=26% Similarity=0.492 Sum_probs=82.7
Q ss_pred CCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCC
Q 003839 91 VGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (792)
Q Consensus 91 ~~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (792)
..+.++|||+|++...++|++|||||.++.|+||+++.+ .
T Consensus 3 ~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~----------------------------------------~ 42 (127)
T 1fgy_A 3 FNPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTTD----------------------------------------K 42 (127)
T ss_dssp SSCSEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTTC----------------------------------------S
T ss_pred CCCceEeEEEEECCCCCCeEEEEEEEECCEEEEeCCCCC----------------------------------------C
Confidence 467899999999998999999999999999999996543 2
Q ss_pred CcceEEEcCceEEEecCC--CCCcEEEEeCC----------------------eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 003839 171 KPFGEVHLKVSSIRDSKS--DDKRFSIFTGT----------------------KRLHLRAETREDRFAWMEALQAVKDMF 226 (792)
Q Consensus 171 ~p~G~I~L~~ssi~~~~~--d~~~F~I~t~~----------------------k~~~L~A~s~~dr~~Wi~aL~~a~~~~ 226 (792)
+|+|.|.|..+++..... ....|.|.++. |+|+|+|+|.+|+++||.||+.++...
T Consensus 43 ~~~g~i~L~~~~v~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~ 122 (127)
T 1fgy_A 43 EPRGIIPLENLSIREVLDPRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRD 122 (127)
T ss_dssp SCSEEEECTTCEEEEECCSSCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHHHC
T ss_pred CcceEEECCceEEEEccCCCCCceEEEecCCccccccccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHhccC
Confidence 478999999998765443 36678887653 789999999999999999999999875
Q ss_pred c
Q 003839 227 P 227 (792)
Q Consensus 227 ~ 227 (792)
+
T Consensus 123 ~ 123 (127)
T 1fgy_A 123 P 123 (127)
T ss_dssp T
T ss_pred C
Confidence 4
No 17
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=99.74 E-value=1.2e-17 Score=156.15 Aligned_cols=101 Identities=27% Similarity=0.428 Sum_probs=83.5
Q ss_pred ccCCCCcceEEEEEeecCCCCCceeeEEEEeCC--eEEEEeecCCCccccchhhcccccccccchhhhhhhccccccccc
Q 003839 87 INDIVGNGISGVLYKWVNYGKGWRPRWFVLQDG--VLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTS 164 (792)
Q Consensus 87 ~~~~~~~~~~G~L~K~~n~~kgWk~RwFVL~~g--~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~ 164 (792)
......+.++|||+|++...++|++|||||.++ .|+||+.+.+
T Consensus 12 ~~~~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yy~~~~~----------------------------------- 56 (129)
T 1x05_A 12 EEFRGVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGA----------------------------------- 56 (129)
T ss_dssp STTCSEEEEEEEEEECCSSCCCCEEEEEEEEETTTEEEEECSSCC-----------------------------------
T ss_pred ccccCCceEEEEEEecCCCCCCCeeEEEEEeCCCCEEEEECCCCC-----------------------------------
Confidence 344567789999999999999999999999765 9999996532
Q ss_pred ccccCCCcceEEEcCceEEEecCC--------CCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 003839 165 QRLLNRKPFGEVHLKVSSIRDSKS--------DDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDMFP 227 (792)
Q Consensus 165 ~~~~~~~p~G~I~L~~ssi~~~~~--------d~~~F~I~t~~-k~~~L~A~s~~dr~~Wi~aL~~a~~~~~ 227 (792)
.+|+|.|+|..+++..... ..+.|.|.++. ++|+|+|+|.+|+++||.||+.++....
T Consensus 57 -----~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~~~ 123 (129)
T 1x05_A 57 -----EDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMASRTGK 123 (129)
T ss_dssp -----SSCSEEEECTTCEEEECCCCCCSSSCSSCSEEEEECTTCCCCEEECSSHHHHHHHHHHHHHHHTCCS
T ss_pred -----CcceeEEEccCCEEEEccCCccccccCCCeEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHccC
Confidence 2488999999988764322 35789999976 6799999999999999999999987643
No 18
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=99.74 E-value=1.2e-17 Score=155.44 Aligned_cols=99 Identities=21% Similarity=0.280 Sum_probs=83.6
Q ss_pred CCCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccC
Q 003839 90 IVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (792)
Q Consensus 90 ~~~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~ 169 (792)
...+.++|||+|+++..++|++|||||.++.|+||+++.+
T Consensus 15 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~---------------------------------------- 54 (126)
T 1fao_A 15 PSLGTKEGYLTKQGGLVKTWKTRWFTLHRNELKYFKDQMS---------------------------------------- 54 (126)
T ss_dssp CCTTCEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTTC----------------------------------------
T ss_pred CCCccEEEEEEEcCCCCCCcccEEEEEECCEEEEeCCCCC----------------------------------------
Confidence 3467899999999999999999999999999999996543
Q ss_pred CCcceEEEcCceEE-EecC--CCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 003839 170 RKPFGEVHLKVSSI-RDSK--SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (792)
Q Consensus 170 ~~p~G~I~L~~ssi-~~~~--~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~~~ 228 (792)
.+|+|.|+|..+++ .... .....|.|.++.++|+|+|+|.+|+.+||.||+.++....+
T Consensus 55 ~~~~g~i~L~~~~~v~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~~~ 116 (126)
T 1fao_A 55 PEPIRILDLTECSAVQFDYSQERVNCFCLVFPFRTFYLCAKTGVEADEWIKILRWKLSQIRK 116 (126)
T ss_dssp SSCSEEEEGGGCCEEEEECSSSSSSEEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHTC--
T ss_pred CCceeEEEccceEEEEecccCCCCCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHHHHHHh
Confidence 24789999999884 3332 23578999999999999999999999999999999987543
No 19
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.74 E-value=6.3e-18 Score=158.64 Aligned_cols=94 Identities=18% Similarity=0.303 Sum_probs=78.7
Q ss_pred CcceEEEEEeecC-CCCCceeeEEEEeCCeEEEEe----ecCCCccccchhhcccccccccchhhhhhhccccccccccc
Q 003839 92 GNGISGVLYKWVN-YGKGWRPRWFVLQDGVLSYYK----IHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQR 166 (792)
Q Consensus 92 ~~~~~G~L~K~~n-~~kgWk~RwFVL~~g~L~YYk----~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~ 166 (792)
+..++|||+|++. ..|.||+|||||.+..|+||+ .+..
T Consensus 7 n~~~~G~L~KqG~~~~K~WKrRwFVL~~~~LyYfk~~~~~~~~------------------------------------- 49 (126)
T 1wi1_A 7 GMKHSGYLWAIGKNVWKRWKKRFFVLVQVSQYTFAMCSYREKK------------------------------------- 49 (126)
T ss_dssp CEEEEEEEEEECSSSCCSCEEEEEEEEEEETTEEEEEECCSSS-------------------------------------
T ss_pred CCceeEEEEEeCCCcccccceEEEEEeCCEEEEEEcccccccC-------------------------------------
Confidence 3479999999986 569999999999999999999 4332
Q ss_pred ccCCCcceEEEcCceEEEecC--C----CCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 167 LLNRKPFGEVHLKVSSIRDSK--S----DDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 167 ~~~~~p~G~I~L~~ssi~~~~--~----d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
..|.|.|.|..++|.... + ....|.|++++++|+|.|+|.+||+.||+||+.|...
T Consensus 50 ---~~p~G~I~L~g~tV~~~~~~~~~~~~k~~F~~v~~~~ty~~~Adseee~~~WikAi~~A~~~ 111 (126)
T 1wi1_A 50 ---AEPQELLQLDGYTVDYTDPQPGLEGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMYRATGQ 111 (126)
T ss_dssp ---SCCSEEEECSSCEEEECCCCSSCCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred ---CCCceEEECCCcEEEEecCCcccccCceEEEEecCCceEEEEcCCHHHHHHHHHHHHHHhcc
Confidence 348899999999987431 1 2356888888889999999999999999999999864
No 20
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=99.74 E-value=7.1e-18 Score=158.45 Aligned_cols=111 Identities=22% Similarity=0.275 Sum_probs=77.0
Q ss_pred CcceEEEEEee-cC-CCCCceeeEEEEe-CCeEEEEeecCCCccccchhhcccccccccchhhhhhhccccccccccccc
Q 003839 92 GNGISGVLYKW-VN-YGKGWRPRWFVLQ-DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (792)
Q Consensus 92 ~~~~~G~L~K~-~n-~~kgWk~RwFVL~-~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~ 168 (792)
.+.++|||+|+ ++ ..++||+|||||. +|.|+||++..+. + .. ...+.|+-. ...
T Consensus 3 ~~~k~G~L~K~~g~~~~k~WkkRwFvL~~~~~l~Y~~~~~d~---~--~~-~~~~~i~l~-----------------~~~ 59 (128)
T 2rlo_A 3 IPIKQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLYHPSINDY---I--HS-THGKEMDLL-----------------RTT 59 (128)
T ss_dssp CEEEEEEEEEECSCSTTCCEEEEEEEEETTTEEEEESSHHHH---H--HT-CSCEEEESS-----------------SCE
T ss_pred cceeEEEEEEecCCCccCCccEEEEEEeCCCEEEEecchhhh---c--cc-cCCCeeeee-----------------eeE
Confidence 46799999999 64 7899999999997 5999999853210 0 00 000000000 000
Q ss_pred CCCcceEEEcCceEEEec--------CCCCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 169 NRKPFGEVHLKVSSIRDS--------KSDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 169 ~~~p~G~I~L~~ssi~~~--------~~d~~~F~I~t~~-k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
...|.|.|.|..+++... ....+.|.|.+++ |+|+|+|+|.+||++||+||+.++..
T Consensus 60 ~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~ai~~~i~~ 125 (128)
T 2rlo_A 60 VKVPGKRPPRAISAFGPSASGSAGQAEEENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQILA 125 (128)
T ss_dssp EECSSCCCCCSSCCCSCCSCCCCSSCCCCCCCEEEECTTSCEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred EecCCCccccccccccccccccccccccCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 113667777777765421 1346789999998 99999999999999999999999864
No 21
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.74 E-value=1.7e-17 Score=151.50 Aligned_cols=99 Identities=20% Similarity=0.404 Sum_probs=83.2
Q ss_pred CCCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccC
Q 003839 90 IVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (792)
Q Consensus 90 ~~~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~ 169 (792)
...+.++|||.|++...++|++|||||.++.|+||+++.+
T Consensus 5 ~~~~~~~G~L~K~~~~~~~Wk~R~fvL~~~~L~yy~~~~~---------------------------------------- 44 (115)
T 2dn6_A 5 SSGVLKQGYMMKKGHRRKNWTERWFVLKPNIISYYVSEDL---------------------------------------- 44 (115)
T ss_dssp CCSCSEEEEEEEECTTSSCEEEEEEEECSSCEEEESSTTC----------------------------------------
T ss_pred CCCceEEEEEEecCCCCCCcEEeEEEEECCEEEEeCCCCC----------------------------------------
Confidence 3567899999999999999999999999999999996543
Q ss_pred CCcceEEEcCce-EEEecCC---CCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 003839 170 RKPFGEVHLKVS-SIRDSKS---DDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (792)
Q Consensus 170 ~~p~G~I~L~~s-si~~~~~---d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~~~ 228 (792)
..|+|.|.|..+ .|..... ..+.|.|.++.++|+|+|+|.+|+++||.||+.++.....
T Consensus 45 ~~~~g~i~L~~~~~v~~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~ai~~~~~~~~~ 107 (115)
T 2dn6_A 45 KDKKGDILLDENCCVESLPDKDGKKCLFLVKCFDKTFEISASDKKKKQEWIQAIHSTIHLLKL 107 (115)
T ss_dssp SSEEEEECCCTTCEEEEECCCTTCCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCcEEEecCcEEEEECCCCCCCeeEEEEEeCCCEEEEEcCCHHHHHHHHHHHHHHHHHHhc
Confidence 237899999864 4544322 2568999999999999999999999999999999987543
No 22
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=99.74 E-value=1.3e-17 Score=154.60 Aligned_cols=99 Identities=21% Similarity=0.357 Sum_probs=83.3
Q ss_pred CCCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccC
Q 003839 90 IVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (792)
Q Consensus 90 ~~~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~ 169 (792)
...+.++|||+|+++..++|++|||||.++.|+||+++.+
T Consensus 11 ~~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~L~yy~~~~~---------------------------------------- 50 (125)
T 1eaz_A 11 DSAVIKAGYCVKQGAVMKNWKRRYFQLDENTIGYFKSELE---------------------------------------- 50 (125)
T ss_dssp -CCCSEEEEEEEECTTTCCEEEEEEEECSSEEEEESSTTC----------------------------------------
T ss_pred CCCccEEEEEEEeCCCCCCcceEEEEEeCCEEEEEcCCCC----------------------------------------
Confidence 3567899999999999999999999999999999997543
Q ss_pred CCcceEEEcCceEE-EecC-----CCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 003839 170 RKPFGEVHLKVSSI-RDSK-----SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (792)
Q Consensus 170 ~~p~G~I~L~~ssi-~~~~-----~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~~~ 228 (792)
..|+|.|+|..+.. .... .....|.|.++.|+|+|+|+|.+|+++||.||+.++.....
T Consensus 51 ~~~~g~i~l~~~~~v~~~~~~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~W~~al~~~i~~~~~ 115 (125)
T 1eaz_A 51 KEPLRVIPLKEVHKVQECKQSDIMMRDNLFEIVTTSRTFYVQADSPEEMHSWIKAVSGAIVAQRG 115 (125)
T ss_dssp SSCSEEEEGGGCCEEEECTTHHHHTCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHHHTC-
T ss_pred CcceeEEEcccceEEeeccccccCCcCCEEEEEeCCcEEEEEcCCHHHHHHHHHHHHHHHHhccC
Confidence 24789999998753 3321 33788999999999999999999999999999999987543
No 23
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=99.74 E-value=5.3e-18 Score=154.70 Aligned_cols=95 Identities=28% Similarity=0.430 Sum_probs=75.7
Q ss_pred CCCcceEEEEEeecCCCCCceeeEEEE-eCCeEEEEeecCCCccccchhhcccccccccchhhhhhhccccccccccccc
Q 003839 90 IVGNGISGVLYKWVNYGKGWRPRWFVL-QDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (792)
Q Consensus 90 ~~~~~~~G~L~K~~n~~kgWk~RwFVL-~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~ 168 (792)
...+.++|||+|++...++||+||||| .++.|+||+++.+.
T Consensus 2 ~~~~~~~G~L~K~g~~~k~WkkR~fvL~~~~~L~yyk~~~~~-------------------------------------- 43 (112)
T 3aj4_A 2 SMAFVKSGWLLRQSTILKRWKKNWFDLWSDGHLIYYDDQTRQ-------------------------------------- 43 (112)
T ss_dssp CCSCSEEEEEEEECSSSCCEEEEEEEECTTSEEEEESSTTCC--------------------------------------
T ss_pred CcceeEEEEEEeeCCCCCCeeceEEEEeeCCEEEEEcCCCCC--------------------------------------
Confidence 356789999999999999999999999 99999999976541
Q ss_pred CCCcceEEEcCceEEE-----------ecCCC--CCcEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003839 169 NRKPFGEVHLKVSSIR-----------DSKSD--DKRFSIFTG-TKRLHLRAETREDRFAWMEALQAVKD 224 (792)
Q Consensus 169 ~~~p~G~I~L~~ssi~-----------~~~~d--~~~F~I~t~-~k~~~L~A~s~~dr~~Wi~aL~~a~~ 224 (792)
.|.|.|+|...+|. ..... ++.|.|.++ .|+|+|+|+|.+|+++||+||+.|+.
T Consensus 44 --~~~g~i~l~~~~i~l~~~~~v~~v~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 111 (112)
T 3aj4_A 44 --NIEDKVHMPMDCINIRTGQECRDTQPPDGKSKDCMLQIVCRDGKTISLCAESTDDCLAWKFTLQDSRT 111 (112)
T ss_dssp --SEEEEEEHHHHEEEEEEGGGCCSCCCSTTCCGGGEEEEEETTSCEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred --CCCccccccccceeecccccccccCCCCCCCcCcEEEEEecCCcEEEEEeCCHHHHHHHHHHHHHHhh
Confidence 25677777654422 11111 358999875 79999999999999999999999863
No 24
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=99.73 E-value=2.2e-17 Score=153.87 Aligned_cols=97 Identities=24% Similarity=0.291 Sum_probs=81.8
Q ss_pred CCCCcceEEEEEeecC-CCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccc
Q 003839 89 DIVGNGISGVLYKWVN-YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRL 167 (792)
Q Consensus 89 ~~~~~~~~G~L~K~~n-~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~ 167 (792)
....+.++|||+|++. ..++|++|||||.++.|+||+++.+
T Consensus 17 ~~~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~-------------------------------------- 58 (128)
T 2dkp_A 17 PNAPVVRRGWLYKQDSTGMKLWKKRWFVLSDLCLFYYRDEKE-------------------------------------- 58 (128)
T ss_dssp TTSCCCEEEEEEEECCSSSCCEEEEEEEEETTEEEEESSTTC--------------------------------------
T ss_pred CCCCcEEEEEEEEeCCCCCCCceeEEEEEeCCEEEEECCCCC--------------------------------------
Confidence 3456789999999987 7899999999999999999997543
Q ss_pred cCCCcceEEEcCceEEEecC-----CCCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 168 LNRKPFGEVHLKVSSIRDSK-----SDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 168 ~~~~p~G~I~L~~ssi~~~~-----~d~~~F~I~t~~-k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
..|+|.|+|..+.|.... .....|.|.++. ++|+|+|+|.+|+++||+||+.|+..
T Consensus 59 --~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~~ 120 (128)
T 2dkp_A 59 --EGILGSILLPSFQIALLTSEDHINRKYAFKAAHPNMRTYYFCTDTGKEMELWMKAMLDAALV 120 (128)
T ss_dssp --CSEEEEECGGGSEEEECCGGGCCSSCSEEEEECSSSCCEEEECSSHHHHHHHHHHHHHHHSC
T ss_pred --cccceEEEcCceEEEEcCCcccCCCCeEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 237899999998876543 235679999875 99999999999999999999998763
No 25
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=99.73 E-value=2.9e-17 Score=161.59 Aligned_cols=98 Identities=17% Similarity=0.272 Sum_probs=78.5
Q ss_pred CcceEEEEEeecCC-----CCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhccccccccccc
Q 003839 92 GNGISGVLYKWVNY-----GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQR 166 (792)
Q Consensus 92 ~~~~~G~L~K~~n~-----~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~ 166 (792)
.++++|||.|++.. .+.||+|||||+++.|+||+++.+.
T Consensus 14 ~~i~EG~L~Kr~~~kk~~~~knWKkRwFVL~~~~L~Yyk~~~~~------------------------------------ 57 (164)
T 2lul_A 14 NTILEEILIKRSQQKKKTSPLNYKERLFVLTKSMLTYYEGRAEK------------------------------------ 57 (164)
T ss_dssp SEEEEEEEEEECCCCSSSCCCCEEEEEEEEESSEEEEECCCSSS------------------------------------
T ss_pred CeeEEEEEEEecCCCCCCCCCCceeEEEEEECCEEEEEeccCcc------------------------------------
Confidence 45899999999753 2469999999999999999975431
Q ss_pred ccCCCcceEEEcCceEEEe-cC--------CCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 003839 167 LLNRKPFGEVHLKVSSIRD-SK--------SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (792)
Q Consensus 167 ~~~~~p~G~I~L~~ssi~~-~~--------~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~~~ 228 (792)
..|+|.|.|..+.... .. .....|.|.++.|+|+|+|+|++||++||+||+.++..-+.
T Consensus 58 ---~~~~G~I~L~~~~~v~~~~~~~~~~~~~~~~~f~i~t~~rt~~l~A~s~~e~~~Wi~aL~~~i~~n~~ 125 (164)
T 2lul_A 58 ---KYRKGFIDVSKIKCVEIVKNDDGVIPCQNKYPFQVVHDANTLYIFAPSPQSRDLWVKKLKEEIKNNNN 125 (164)
T ss_dssp ---CCCCCEEEGGGCCEEEECCCCSSSCCSSSCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHTTCSC
T ss_pred ---cccccEEEEeeeEEEEeccccccCcccccceeEEEecCCcEEEEECCCHHHHHHHHHHHHHHHHHChh
Confidence 2368999998765332 11 12456899999999999999999999999999999986554
No 26
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=99.73 E-value=2.7e-17 Score=148.73 Aligned_cols=93 Identities=28% Similarity=0.515 Sum_probs=78.4
Q ss_pred CCcceEEEEEeecCCCCCceeeEEEEeCC--eEEEEeecCCCccccchhhcccccccccchhhhhhhccccccccccccc
Q 003839 91 VGNGISGVLYKWVNYGKGWRPRWFVLQDG--VLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (792)
Q Consensus 91 ~~~~~~G~L~K~~n~~kgWk~RwFVL~~g--~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~ 168 (792)
..+.++|||+|++...++|++|||||.++ .|+||+++.+
T Consensus 5 ~~~~~~G~L~K~g~~~~~Wk~R~fvL~~~~~~L~yyk~~~~--------------------------------------- 45 (109)
T 2i5f_A 5 GVIIKQGCLLKQGHRRKNWKVRKFILREDPAYLHYYDPAGA--------------------------------------- 45 (109)
T ss_dssp CCEEEEEEEEEECTTTCCEEEEEEEEETTTTEEEEECTTSC---------------------------------------
T ss_pred CceeEEEEEEEcCCCCCCceEEEEEEeCCCcEEEEECCCCC---------------------------------------
Confidence 45689999999999999999999999875 9999986532
Q ss_pred CCCcceEEEcCceEEEecC-C-------CCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHH
Q 003839 169 NRKPFGEVHLKVSSIRDSK-S-------DDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVK 223 (792)
Q Consensus 169 ~~~p~G~I~L~~ssi~~~~-~-------d~~~F~I~t~~-k~~~L~A~s~~dr~~Wi~aL~~a~ 223 (792)
..|+|.|+|..+++.... . ....|.|.++. ++|+|+|+|.+|+++||.||+.|+
T Consensus 46 -~~~~g~i~L~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~ai~~~~ 108 (109)
T 2i5f_A 46 -EDPLGAIHLRGCVVTSVESNSNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMAS 108 (109)
T ss_dssp -SSCSEEEECTTCEEEEECC--------CCSEEEEECTTCCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred -CCccEEEECCCCEEEEccCCcccccCCCceEEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHh
Confidence 247899999998875432 1 36789999986 679999999999999999999986
No 27
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=99.72 E-value=4.1e-17 Score=150.90 Aligned_cols=95 Identities=29% Similarity=0.374 Sum_probs=80.0
Q ss_pred CCcceEEEEEeec-CCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccC
Q 003839 91 VGNGISGVLYKWV-NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (792)
Q Consensus 91 ~~~~~~G~L~K~~-n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~ 169 (792)
..+.++|||+|++ +..++|++|||||.++.|+||+++.+
T Consensus 9 ~~~~~~G~L~K~~~~~~~~WkkR~fvL~~~~L~yy~~~~~---------------------------------------- 48 (123)
T 1upq_A 9 LPVHIRGWLHKQDSSGLRLWKRRWFVLSGHCLFYYKDSRE---------------------------------------- 48 (123)
T ss_dssp SCEEEEEEEEEECSSSSCCEEEEEEEEETTEEEEESSTTC----------------------------------------
T ss_pred CCceEEEEEEeeCCCCCCCceeEEEEEeCCEEEEECCCCC----------------------------------------
Confidence 4568999999998 47899999999999999999997543
Q ss_pred CCcceEEEcCceEEEecCC-----CCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 170 RKPFGEVHLKVSSIRDSKS-----DDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 170 ~~p~G~I~L~~ssi~~~~~-----d~~~F~I~t~~-k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
.+|.|.|+|..+.|..... ....|.|.+++ ++|+|+|+|.+|+.+||.||+.|+..
T Consensus 49 ~~~~g~i~l~~~~v~~~~~~~~~~~~~~f~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~~ 110 (123)
T 1upq_A 49 ESVLGSVLLPSYNIRPDGPGAPRGRRFTFTAEHPGMRTYVLAADTLEDLRGWLRALGRASRA 110 (123)
T ss_dssp CSCCEEEEGGGCEEEECCSSCTTSSSSEEEEECTTSCCEEEECSSHHHHHHHHHHHHHHHC-
T ss_pred cccceEEECCCCEEEECCCCccCCCcEEEEEECCCCeEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 2478999999999876532 24567787876 99999999999999999999999864
No 28
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=99.72 E-value=2.1e-17 Score=163.42 Aligned_cols=101 Identities=16% Similarity=0.179 Sum_probs=79.0
Q ss_pred CcceEEEEEeecC-----CCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhccccccccccc
Q 003839 92 GNGISGVLYKWVN-----YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQR 166 (792)
Q Consensus 92 ~~~~~G~L~K~~n-----~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~ 166 (792)
.++++|||.|++. ..++||+|||||.++.|+||+++.+.
T Consensus 2 ~vikeG~L~Kr~~~~~~~~~k~WKkRwFVL~~~~L~Yyk~~~~~------------------------------------ 45 (169)
T 1btk_A 2 AVILESIFLKRSQQKKKTSPLNFKKCLFLLTVHKLSYYEYDFER------------------------------------ 45 (169)
T ss_dssp CCCEEEEEEEECCCSSTTCCCCEEEEEEEECSSEEEEEEEETTT------------------------------------
T ss_pred ceEEEEEEEEecCCCCCcccCCCceEEEEEcCCEEEEEecCCcc------------------------------------
Confidence 3579999999863 24789999999999999999975320
Q ss_pred ccCCCcceEEEcCceEEEecC---CC-C-------------------------CcEEEEeCCeEEEEEcCCHHHHHHHHH
Q 003839 167 LLNRKPFGEVHLKVSSIRDSK---SD-D-------------------------KRFSIFTGTKRLHLRAETREDRFAWME 217 (792)
Q Consensus 167 ~~~~~p~G~I~L~~ssi~~~~---~d-~-------------------------~~F~I~t~~k~~~L~A~s~~dr~~Wi~ 217 (792)
....+|+|.|.|..+.+.+.. .+ . ..|.|+++.|+|+|+|+|.+||++||+
T Consensus 46 ~~~~~~~G~I~L~~~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~F~I~t~~rt~yl~A~s~~E~~eWi~ 125 (169)
T 1btk_A 46 GRRGSKKGSIDVEKITCVETVVPEKNPPPERQIPRRGEESSEMEQISIIERFPYPFQVVYDEGPLYVFSPTEELRKRWIH 125 (169)
T ss_dssp TEEEEEEEEEEGGGEEEEEECCCCSSCCGGGCC---------CCTTHHHHCCCEEEEEEETTCCEEEEESCHHHHHHHHH
T ss_pred CCCCceeeEEECcceEEEEeccCCCCcchhcccccccCcccccccccccccccccEEEEeCCceEEEEcCCHHHHHHHHH
Confidence 011247899999987643221 11 1 568999999999999999999999999
Q ss_pred HHHHHHHhccc
Q 003839 218 ALQAVKDMFPR 228 (792)
Q Consensus 218 aL~~a~~~~~~ 228 (792)
||+.++...+.
T Consensus 126 aI~~~i~~n~~ 136 (169)
T 1btk_A 126 QLKNVIRYNSD 136 (169)
T ss_dssp HHHHHHTTCSC
T ss_pred HHHHHHHHCcc
Confidence 99999986554
No 29
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=5.2e-17 Score=148.71 Aligned_cols=95 Identities=26% Similarity=0.449 Sum_probs=79.7
Q ss_pred CCcceEEEEEeec-CCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccC
Q 003839 91 VGNGISGVLYKWV-NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (792)
Q Consensus 91 ~~~~~~G~L~K~~-n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~ 169 (792)
..+.++|||+|++ +..+.|++|||||.++.|+||+++.+
T Consensus 9 ~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~---------------------------------------- 48 (117)
T 2d9y_A 9 APVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEKE---------------------------------------- 48 (117)
T ss_dssp CCCCEEEEEEEECTTSSSCEEEEEEEEETTEEEEESSTTC----------------------------------------
T ss_pred CCeeEEEEEEEeCCCCCCCceEEEEEECCCEEEEECCCCC----------------------------------------
Confidence 4678999999998 67899999999999999999997543
Q ss_pred CCcceEEEcCceEEEecCC-----CCCcEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 170 RKPFGEVHLKVSSIRDSKS-----DDKRFSIFT-GTKRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 170 ~~p~G~I~L~~ssi~~~~~-----d~~~F~I~t-~~k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
..|+|.|+|..+++..... ....|.|.+ +.++|+|+|+|.+|+++||.||+.|+..
T Consensus 49 ~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~ 110 (117)
T 2d9y_A 49 ESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAARV 110 (117)
T ss_dssp CSCCEEEECSSCEEEECCTTTTCCCSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHTTCC
T ss_pred CCcCCEEEeCCeEEEEcCccccCCCccEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHHhh
Confidence 2478999999998764421 245799865 4699999999999999999999999764
No 30
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=99.72 E-value=2.1e-17 Score=148.64 Aligned_cols=95 Identities=20% Similarity=0.405 Sum_probs=79.8
Q ss_pred CcceEEEEEeecCC----CCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccc
Q 003839 92 GNGISGVLYKWVNY----GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRL 167 (792)
Q Consensus 92 ~~~~~G~L~K~~n~----~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~ 167 (792)
.+.++|||+|++.. .++|++|||||.++.|+||+++.+
T Consensus 2 ~v~~~G~L~K~~~~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~-------------------------------------- 43 (108)
T 1u5d_A 2 SVIKQGYLEKKSKDHSFFGSEWQKRWCVVSRGLFYYYANEKS-------------------------------------- 43 (108)
T ss_dssp CEEEEEEEEEEEECSSSSCEEEEEEEEEEETTEEEEESSTTC--------------------------------------
T ss_pred CccEEEEEEEcCCCCCccccCceeeEEEEeCCEEEEecCCCC--------------------------------------
Confidence 35789999999743 289999999999999999997543
Q ss_pred cCCCcceEEEcCceEEEecC---C---CCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 003839 168 LNRKPFGEVHLKVSSIRDSK---S---DDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDMF 226 (792)
Q Consensus 168 ~~~~p~G~I~L~~ssi~~~~---~---d~~~F~I~t~~-k~~~L~A~s~~dr~~Wi~aL~~a~~~~ 226 (792)
..|+|.|+|..+++.... . ....|.|.++. ++|+|+|+|.+|+++||.||+.|++.+
T Consensus 44 --~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~i~~l 107 (108)
T 1u5d_A 44 --KQPKGTFLIKGYSVRMAPHLRRDSKKESCFELTSQDRRTYEFTATSPAEARDWVDQISFLLKDL 107 (108)
T ss_dssp --SSCSEEEECTTCEEEECGGGCSSGGGGGEEEEECSSSCCEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred --CCCCEEEEecceEEEeCCccccccCCcceEEEEcCCCcEEEEECCCHHHHHHHHHHHHHHHHhc
Confidence 247899999999976642 1 25689999987 999999999999999999999998753
No 31
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=99.71 E-value=2.4e-17 Score=155.45 Aligned_cols=99 Identities=22% Similarity=0.264 Sum_probs=77.1
Q ss_pred CcceEEEEEeec-CCCCCceeeEEEEe---CCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccc
Q 003839 92 GNGISGVLYKWV-NYGKGWRPRWFVLQ---DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRL 167 (792)
Q Consensus 92 ~~~~~G~L~K~~-n~~kgWk~RwFVL~---~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~ 167 (792)
...++|||.|++ ...++||+|||||+ +..|+||+++.+. .
T Consensus 14 ~~~~~G~L~K~g~~~~k~WkrRwFvL~~~~~~~L~Y~k~~~~~------------------------------------~ 57 (126)
T 1v5p_A 14 QNRICGFLDIEDNENSGKFLRRYFILDTQANCLLWYMDNPQNL------------------------------------A 57 (126)
T ss_dssp CCCEECCEEEECTTCSSCEEEEEEEEETTTTEEEEESSCTTTS------------------------------------C
T ss_pred CCceEEEEEEeCCCCCCCccceEEEEecCCCCEEEEECCCCCC------------------------------------C
Confidence 345899999998 67899999999998 5567777864210 1
Q ss_pred cCCCcceEEEcCc-eEEEecC---C--CCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 003839 168 LNRKPFGEVHLKV-SSIRDSK---S--DDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (792)
Q Consensus 168 ~~~~p~G~I~L~~-ssi~~~~---~--d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~ 226 (792)
...+|.|.|.|.. +.|.... . ....|.|.++.|+|+|+|+|.+|+++||+||+.|...-
T Consensus 58 ~~~~~~G~I~L~~~~~V~~~~~~~~~~~~~~F~i~t~~r~y~l~A~s~~e~~~Wi~al~~a~~~~ 122 (126)
T 1v5p_A 58 VGAGAVGSLQLTYISKVSIATPKQKPKTPFCFVINALSQRYFLQANDQKDLKDWVEALNQASKSG 122 (126)
T ss_dssp TTCCCSEEEETTTCCEEEECCTTTSCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHTTTTS
T ss_pred CCceeeEEEECCCccEEecCCcccCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHhcC
Confidence 1235889999987 4565433 1 13578899999999999999999999999999987653
No 32
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.71 E-value=1.6e-17 Score=150.88 Aligned_cols=94 Identities=19% Similarity=0.304 Sum_probs=77.6
Q ss_pred CCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCC
Q 003839 91 VGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (792)
Q Consensus 91 ~~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (792)
..+.++|||+|+ ..++||+|||||+++.|+||+++.+ ..
T Consensus 6 ~~~~~~G~L~K~--~~k~Wk~RwfvL~~~~L~yyk~~~~---------------------------------------~~ 44 (107)
T 2cof_A 6 SGLETSSYLNVL--VNSQWKSRWCSVRDNHLHFYQDRNR---------------------------------------SK 44 (107)
T ss_dssp CCCTTCCEEEEE--ETTEEEEEEEEECSSCEEEECSSTT---------------------------------------CS
T ss_pred CCCcEeEEEEEe--cCCCcceEEEEEECCEEEEEeCCcc---------------------------------------cC
Confidence 456899999999 7799999999999999999997643 11
Q ss_pred CcceEEEcCceEEEecCC--CCCcEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 171 KPFGEVHLKVSSIRDSKS--DDKRFSIFTG-TKRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 171 ~p~G~I~L~~ssi~~~~~--d~~~F~I~t~-~k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
.+.+.|.|..|.|..... ....|.|.++ .|+|+|+|+|.+|+++||+||+.|...
T Consensus 45 ~~~~~i~l~~~~v~~~~~~~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~~~~~ 102 (107)
T 2cof_A 45 VAQQPLSLVGCEVVPDPSPDHLYSFRILHKGEELAKLEAKSSEEMGHWLGLLLSESGS 102 (107)
T ss_dssp EEEEEECTTTCEEECCCBTTBSCEEEEEETTEEEEEEECSSHHHHHHHHHHHHHHSSC
T ss_pred CCeeEEeccceEEEECCCCCCCeEEEEEeCCCeEEEEEcCCHHHHHHHHHHHHHHHcC
Confidence 356788888887765432 3578999998 789999999999999999999988653
No 33
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.71 E-value=7.3e-17 Score=149.03 Aligned_cols=95 Identities=26% Similarity=0.434 Sum_probs=78.9
Q ss_pred CCcceEEEEEeec-CCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccC
Q 003839 91 VGNGISGVLYKWV-NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (792)
Q Consensus 91 ~~~~~~G~L~K~~-n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~ 169 (792)
..+.++|||+|++ +..++|++|||||.++.|+||+++.+
T Consensus 20 ~~~~~~G~L~K~~~~~~~~Wk~R~fvL~~~~L~yy~~~~~---------------------------------------- 59 (122)
T 2yry_A 20 APVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEKE---------------------------------------- 59 (122)
T ss_dssp CCEEEEEEEEEECCSSSCCEEEEEEEEETTEEEEESSTTC----------------------------------------
T ss_pred CCccEEEEEEEECCCCCCCcEEEEEEEeCCEEEEECCCCC----------------------------------------
Confidence 4568999999997 58899999999999999999997543
Q ss_pred CCcceEEEcCceEEEecC-----CCCCcEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 170 RKPFGEVHLKVSSIRDSK-----SDDKRFSIFTG-TKRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 170 ~~p~G~I~L~~ssi~~~~-----~d~~~F~I~t~-~k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
..|+|.|+|..++|.... .....|.|.+. .++|+|+|+|.+|+++||.||+.|+.+
T Consensus 60 ~~~~g~i~L~~~~v~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~~ 121 (122)
T 2yry_A 60 ESILGSIPLLSFRVAAVQPSDNISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAARV 121 (122)
T ss_dssp CSCCEEEESTTCCCEECCTTCSCSSSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHCC
T ss_pred CCcccEEEcCCCEEEEcCccccCCcccEEEEecCCCcEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 237899999988765432 12457888754 699999999999999999999999753
No 34
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.70 E-value=4.5e-17 Score=156.49 Aligned_cols=98 Identities=19% Similarity=0.246 Sum_probs=82.0
Q ss_pred CCCcceEEEEEeec------CCCCCceeeEEEEeCC-----eEEEEeecCCCccccchhhcccccccccchhhhhhhccc
Q 003839 90 IVGNGISGVLYKWV------NYGKGWRPRWFVLQDG-----VLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKH 158 (792)
Q Consensus 90 ~~~~~~~G~L~K~~------n~~kgWk~RwFVL~~g-----~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~ 158 (792)
...+.++|||+|++ ...++||+|||||.++ .|+||+.+..
T Consensus 15 ~~~~~~~G~L~K~~~~~~~~~~~k~Wk~RwfvL~~~~~g~~~L~yy~~~~~----------------------------- 65 (150)
T 1wg7_A 15 KGGITKHGWLYKGNMNSAISVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKI----------------------------- 65 (150)
T ss_dssp SCCCCCEEEEEECCCCSSHHHHHSSCEEEEEEEEECSSSCEEEEEESSSCC-----------------------------
T ss_pred CCCeeEEEEEEEecCCccccccccCeeEEEEEEecCCCCceEEEEECCCCC-----------------------------
Confidence 45678999999998 4668999999999886 9999997542
Q ss_pred ccccccccccCCCcceEEEcCceEEEecCC--CCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 003839 159 KKETTSQRLLNRKPFGEVHLKVSSIRDSKS--DDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDMF 226 (792)
Q Consensus 159 ~~~~~~~~~~~~~p~G~I~L~~ssi~~~~~--d~~~F~I~t~~-k~~~L~A~s~~dr~~Wi~aL~~a~~~~ 226 (792)
...|+|.|+|..|++..... ....|.|.++. |+|+|+|+|.+|+.+||.||+.|+...
T Consensus 66 ----------~~~~~g~I~L~~~~~~~~~~~~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~ai~~~ 126 (150)
T 1wg7_A 66 ----------SKEPKGSIFLDSCMGVVQNNKVRRFAFELKMQDKSSYLLAADSEVEMEEWITILNKILQLN 126 (150)
T ss_dssp ----------SSCCSEEECTTTCCEECCCCSSCTTEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred ----------CCCcCcEEecccCEEEecCCCCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHHHHHHHhh
Confidence 12478999999998775443 36789999985 899999999999999999999998753
No 35
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=99.70 E-value=1.3e-17 Score=155.24 Aligned_cols=98 Identities=32% Similarity=0.421 Sum_probs=76.3
Q ss_pred CCcceEEEEEeecCCCCCceeeEEEEe-CCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccC
Q 003839 91 VGNGISGVLYKWVNYGKGWRPRWFVLQ-DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (792)
Q Consensus 91 ~~~~~~G~L~K~~n~~kgWk~RwFVL~-~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~ 169 (792)
..+.++|||+|++...++||+|||||. ++.|+||+.+.+.
T Consensus 6 ~~~~~~G~L~K~g~~~k~WkkRwfvL~~~~~L~yy~~~~~~--------------------------------------- 46 (125)
T 1unq_A 6 VAIVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQD--------------------------------------- 46 (125)
T ss_dssp GCEEEEEEEEEECSSSCCEEEEEEEEETTSEEEEESSCCCS---------------------------------------
T ss_pred CCeeEEeeEEeccCCccCccCcEEEEecCCEEEEEeCCCCC---------------------------------------
Confidence 456899999999999999999999998 6899999976541
Q ss_pred CCcceEEEcCceE-----EE-ecCCCCCcEEEEe----CCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 003839 170 RKPFGEVHLKVSS-----IR-DSKSDDKRFSIFT----GTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (792)
Q Consensus 170 ~~p~G~I~L~~ss-----i~-~~~~d~~~F~I~t----~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~~~ 228 (792)
.|+|.|+|..++ +. ........|.|.+ ..++|+|+|+|.+|+.+||.||+.|+...+.
T Consensus 47 -~~~g~i~L~~~~~~~~~~~~~~~~~~~~F~I~~~~~~~~~~~~~~a~s~~e~~~Wi~al~~~~~~~~~ 114 (125)
T 1unq_A 47 -VDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADGLKK 114 (125)
T ss_dssp -HHHHTSCSEEEECTTCEEEEECSSSTTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCceeEccceeEEeeeecccccCCCCEEEEEecCCCCceeEEEEeCCHHHHHHHHHHHHHHHhhccc
Confidence 133444444333 22 2234477899985 4589999999999999999999999987654
No 36
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.70 E-value=6.1e-17 Score=149.77 Aligned_cols=94 Identities=16% Similarity=0.226 Sum_probs=78.1
Q ss_pred CCcceEEEEEeecCCCCCceeeEEEEeCC---eEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccc
Q 003839 91 VGNGISGVLYKWVNYGKGWRPRWFVLQDG---VLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRL 167 (792)
Q Consensus 91 ~~~~~~G~L~K~~n~~kgWk~RwFVL~~g---~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~ 167 (792)
.+..+.|||+|..+ ++.||+|||||.++ +|+||+++.+
T Consensus 6 ~~~~~~G~L~k~~~-~~~WkkrWfVL~~~~~~~Ly~Yk~~~d-------------------------------------- 46 (112)
T 2coc_A 6 SGSLLCGPLRLSES-GETWSEVWAAIPMSDPQVLHLQGGSQD-------------------------------------- 46 (112)
T ss_dssp SSSSSEEEEEEESS-SSCEEEEEEECCTTCTTCEEEECCTTC--------------------------------------
T ss_pred CCceEEEEEEecCC-CCCceEEEEEEECCCccEEEEECCCCc--------------------------------------
Confidence 45678899999876 89999999999874 8999997654
Q ss_pred cCCCcceEEEcCceEEEec--CC---CCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 168 LNRKPFGEVHLKVSSIRDS--KS---DDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 168 ~~~~p~G~I~L~~ssi~~~--~~---d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
.+|.|.|.|.+++|... .+ ....|.|.++.++|+|+|+|.+++++||++|+.|...
T Consensus 47 --~~p~g~I~L~g~~V~~~~~~~~~~~~~~Fki~~~~~~y~f~A~s~e~~~~Wl~al~~A~~~ 107 (112)
T 2coc_A 47 --GRLPRTIPLPSCKLSVPDPEERLDSGHVWKLQWAKQSWYLSASSAELQQQWLETLSTAAHS 107 (112)
T ss_dssp --SSSCSEECGGGCEEECCCSSSCCSSSEEEEEEETTEEEEEEESSHHHHHHHHHHHHHHHSC
T ss_pred --cCcceEEEcCCCEEEecCcccccCCCCEEEEecCCeEEEEEcCCHHHHHHHHHHHHHHhcC
Confidence 24789999999999841 11 1457888989999999999999999999999998654
No 37
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=99.70 E-value=3.4e-17 Score=153.92 Aligned_cols=99 Identities=25% Similarity=0.447 Sum_probs=79.7
Q ss_pred CCcceEEEEEee--cCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhccccccccccccc
Q 003839 91 VGNGISGVLYKW--VNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (792)
Q Consensus 91 ~~~~~~G~L~K~--~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~ 168 (792)
..+.++|||+|+ ++..++|++|||||.++.|+||+.+.+ ..
T Consensus 3 ~~v~~~G~L~K~~~~~~~~~WkrRwfvL~~~~L~yyk~~~d-------------------------------------~~ 45 (134)
T 2y7b_A 3 SSVEERGFLTIFEDVSGFGAWHRRWCVLSGNCISYWTYPDD-------------------------------------EK 45 (134)
T ss_dssp CCCCEEEEEEEEEEETTEEEEEEEEEEEETTEEEEESSHHH-------------------------------------HT
T ss_pred CCceEEeeEEEEcCCCCCCCcEEEEEEEECCEEEEECCCCc-------------------------------------cc
Confidence 356899999999 888899999999999999999996432 11
Q ss_pred CCCcceEEEcCceE---EEecC----CCCCcEEEEe--CC------------------eEEEEEcCCHHHHHHHHHHHHH
Q 003839 169 NRKPFGEVHLKVSS---IRDSK----SDDKRFSIFT--GT------------------KRLHLRAETREDRFAWMEALQA 221 (792)
Q Consensus 169 ~~~p~G~I~L~~ss---i~~~~----~d~~~F~I~t--~~------------------k~~~L~A~s~~dr~~Wi~aL~~ 221 (792)
...|+|.|+|..++ |.... .....|.|.+ +. ++|+|+|+|.+|+.+||.||+.
T Consensus 46 ~~~p~g~I~L~~~~~~~v~~~~~~~~~~~~~F~i~~~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~~ 125 (134)
T 2y7b_A 46 RKNPIGRINLANCTSRQIEPANREFCARRNTFELITVRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQ 125 (134)
T ss_dssp TSCCSEEEEGGGBCSSSCEECCTTTCCCTTEEEEEEEEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHHH
T ss_pred ccCceEEEEhhhCccccccccchhhccCCCEEEEEecCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHHHH
Confidence 23589999999987 44432 2357799887 32 4799999999999999999999
Q ss_pred HHHhc
Q 003839 222 VKDMF 226 (792)
Q Consensus 222 a~~~~ 226 (792)
|+..+
T Consensus 126 ~i~~~ 130 (134)
T 2y7b_A 126 VLVDI 130 (134)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98764
No 38
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.69 E-value=4.2e-17 Score=152.25 Aligned_cols=96 Identities=24% Similarity=0.415 Sum_probs=79.6
Q ss_pred CCcceEEEEEeecCCCCCceeeEEEEe--CCeEEEEeecCCCccccchhhcccccccccchhhhhhhccccccccccccc
Q 003839 91 VGNGISGVLYKWVNYGKGWRPRWFVLQ--DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (792)
Q Consensus 91 ~~~~~~G~L~K~~n~~kgWk~RwFVL~--~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~ 168 (792)
..+.++|||+|++...++||+|||||. .+.|+||+.+..
T Consensus 16 ~~~~~~G~L~K~g~~~~~Wk~R~fvL~~d~~~L~yy~~~~~--------------------------------------- 56 (129)
T 1x1g_A 16 GTVVKQGYLAKQGHKRKNWKVRRFVLRKDPAFLHYYDPSKE--------------------------------------- 56 (129)
T ss_dssp SEEEEEEEEEEECSSSSSEEEEEEEEEESSCEEEEECSSSC---------------------------------------
T ss_pred CCEEEEEEEEEECCCCCCeeeEEEEEeCCCCeEEEeCCCCc---------------------------------------
Confidence 457899999999988999999999997 479999996521
Q ss_pred CCCcceEEEcCceEEEecCC-----------CCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 169 NRKPFGEVHLKVSSIRDSKS-----------DDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 169 ~~~p~G~I~L~~ssi~~~~~-----------d~~~F~I~t~~-k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
..+|+|.|+|..|.+..... .++.|.|.++. ++|+|+|+|.+|+++||.||+.|+..
T Consensus 57 ~~~~~g~i~L~~~~v~~~~~~~~p~~~~~~~~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~ 125 (129)
T 1x1g_A 57 ENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQGNLFKVITKDDTHYYIQASSKAERAEWIEAIKKLTSG 125 (129)
T ss_dssp CSSCSCCEESTTCCCEECCSSSSCSSCSSCCCSSCEEECCTTCCCEEECCSSHHHHHHHHHHHHHHSSS
T ss_pred CCccceEEECcCCEEEEeCCCCCcccccCCCCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 12488999999887654322 35789999987 67999999999999999999999753
No 39
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=99.69 E-value=9.2e-17 Score=150.57 Aligned_cols=104 Identities=14% Similarity=0.245 Sum_probs=79.6
Q ss_pred CCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCC
Q 003839 91 VGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (792)
Q Consensus 91 ~~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (792)
..+.++|||+|++...+.||+|||||.++.|+||+........ . ...+.
T Consensus 10 ~~~~k~G~L~K~g~~~k~Wk~RwfVL~~~~L~yyk~~~~~~~e--------~-----------------------~plg~ 58 (124)
T 2w2x_D 10 DEHKQQGELYMWDSIDQKWTRHFCAIADAKLSFSDDIEQTMEE--------D-----------------------NPLGS 58 (124)
T ss_dssp ---CCEEEEEEEETTTTEEEEEEEEEETTEEEEEEEHHHHHHC--------S-----------------------SCCCC
T ss_pred hhcceeEEEEEECCCCCCceEeEEEEECCEEEEEccccccccc--------c-----------------------cccCC
Confidence 4568999999999999999999999999999999975320000 0 01123
Q ss_pred CcceEEEcCceEEEecCCC----CCcEEEEeC---CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 171 KPFGEVHLKVSSIRDSKSD----DKRFSIFTG---TKRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 171 ~p~G~I~L~~ssi~~~~~d----~~~F~I~t~---~k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
.++|.|+|..|.|....++ ...|.|.++ .++|+|.|+|.+|+++||.||+.|+..
T Consensus 59 ~~~G~I~L~~~~v~~~~~~~~~k~~~F~I~~~~~~~~~~~~~A~s~ee~~~Wi~ai~~a~~~ 120 (124)
T 2w2x_D 59 LCRGILDLNTYNVVKAPQGKNQKSFVFILEPKQQGDPPVEFATDKVEELFEWFQSIREITWK 120 (124)
T ss_dssp SCSEEEEGGGEEEEECTTCBTTBSEEEEEEECC--CCCEEEEECCCHHHHHHHHHHHHHHC-
T ss_pred ccccEEECCCCEEEEccCCcCCCCEEEEEECCCCCCceEEEEECCHHHHHHHHHHHHHHHHh
Confidence 5789999999998776542 356888875 368999999999999999999998764
No 40
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=99.69 E-value=8.7e-17 Score=154.49 Aligned_cols=97 Identities=23% Similarity=0.352 Sum_probs=79.9
Q ss_pred CCcceEEEEEeecCC----CCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhccccccccccc
Q 003839 91 VGNGISGVLYKWVNY----GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQR 166 (792)
Q Consensus 91 ~~~~~~G~L~K~~n~----~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~ 166 (792)
..+.++|||+|++.. .++||+|||||.++.|+||+++.+
T Consensus 15 ~~~~~~G~L~K~g~~~~~~~k~WkkR~fvL~~~~L~yyk~~~~------------------------------------- 57 (148)
T 1u5f_A 15 PFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKD------------------------------------- 57 (148)
T ss_dssp SSEEEEEEEEEECCCSSCSSCSEEEEEEEEETTEEEEESSTTC-------------------------------------
T ss_pred CCccEEEEEEEeCCCCCCcCCCceeEEEEEECCEEEEEcCCCC-------------------------------------
Confidence 567899999999853 479999999999999999997543
Q ss_pred ccCCCcceEEEcCceEEEecCC---C---CCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 003839 167 LLNRKPFGEVHLKVSSIRDSKS---D---DKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDMFP 227 (792)
Q Consensus 167 ~~~~~p~G~I~L~~ssi~~~~~---d---~~~F~I~t~~-k~~~L~A~s~~dr~~Wi~aL~~a~~~~~ 227 (792)
.+|+|.|+|..+++..... + .+.|.|.+++ |+|+|+|+|.+|+++||.||+.|+....
T Consensus 58 ---~~~~g~i~L~~~~v~~~~~~~~~~~~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~~ 122 (148)
T 1u5f_A 58 ---KQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFILQDLG 122 (148)
T ss_dssp ---SSCSEEEECTTCEEEECTTSCSSTTGGGEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHCC---
T ss_pred ---cccceEEEcCCcEEEECCCcccCCCCccEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHHHhc
Confidence 2478999999999875321 2 4679999986 9999999999999999999999987543
No 41
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=99.68 E-value=1.1e-16 Score=144.01 Aligned_cols=94 Identities=15% Similarity=0.272 Sum_probs=74.3
Q ss_pred eEEEEEeec--------CCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhccccccccccc
Q 003839 95 ISGVLYKWV--------NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQR 166 (792)
Q Consensus 95 ~~G~L~K~~--------n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~ 166 (792)
++|||+|++ ...++|++|||||+++.|+||+++.+.. .
T Consensus 1 ~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~~~L~yyk~~~~~~----------------------------------~ 46 (106)
T 1btn_A 1 MEGFLNRKHEWEAHNKKASSRSWHNVYCVINNQEMGFYKDAKSAA----------------------------------S 46 (106)
T ss_dssp CEEEEEEEEEECSTTCBCSCCCCEEEEEEEETTEEEEESSHHHHH----------------------------------H
T ss_pred CccEEEEEEEEeCCCccCCCCChhEEEEEEECCEEEEEeCCcccc----------------------------------c
Confidence 589999998 7889999999999999999999653200 0
Q ss_pred ccCCCcceEEEcCceEEEecCC---CCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHH
Q 003839 167 LLNRKPFGEVHLKVSSIRDSKS---DDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAV 222 (792)
Q Consensus 167 ~~~~~p~G~I~L~~ssi~~~~~---d~~~F~I~t~~-k~~~L~A~s~~dr~~Wi~aL~~a 222 (792)
.....+.+.|+|..+.+..... .++.|.|.++. ++|+|+|+|.+|+++||.||++|
T Consensus 47 ~~~~~~~~~i~l~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~A~s~~e~~~Wi~ai~~A 106 (106)
T 1btn_A 47 GIPYHSEVPVSLKEAICEVALDYKKKKHVFKLRLSDGNEYLFQAKDDEEMNTWIQAISSA 106 (106)
T ss_dssp TCCSSSCCCEECTTCEEEECSSCCSSSSEEEEECTTSCEEEEECSSHHHHHHHHHHHHHC
T ss_pred CCCCCCcceEECCCCEEEEcccccCCccEEEEEecCCCEEEEECCCHHHHHHHHHHHhcC
Confidence 0112356889998887654332 26689999765 99999999999999999999875
No 42
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=99.68 E-value=2.2e-16 Score=149.06 Aligned_cols=109 Identities=22% Similarity=0.321 Sum_probs=80.8
Q ss_pred CCcceEEEEEee-----c-CCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhccccccccc
Q 003839 91 VGNGISGVLYKW-----V-NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTS 164 (792)
Q Consensus 91 ~~~~~~G~L~K~-----~-n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~ 164 (792)
..+.++|||.|. + ...++|++|||||.++.|+|||++....... ..
T Consensus 10 ~~~~k~G~L~kk~~~~~G~~~~k~Wk~rwfvL~~~~L~yykd~~~~~~~~------------------------~~---- 61 (129)
T 2p0d_A 10 HEVEKSGLLNMTKIAQGGRKLRKNWGPSWVVLTGNSLVFYREPPPTAPSS------------------------GW---- 61 (129)
T ss_dssp CSEEEEEEEEEEEEEETTEECCCCCEEEEEEEESSEEEEESCC-------------------------------------
T ss_pred cceeEEEEEEEeeeccCCCcCCCCceEEEEEEeCCEEEEEcCcccccccc------------------------cc----
Confidence 467899999995 3 2348999999999999999999764310000 00
Q ss_pred ccccCCCcceEEEcCceEEEecCCC---CCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 003839 165 QRLLNRKPFGEVHLKVSSIRDSKSD---DKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDMFPR 228 (792)
Q Consensus 165 ~~~~~~~p~G~I~L~~ssi~~~~~d---~~~F~I~t~~-k~~~L~A~s~~dr~~Wi~aL~~a~~~~~~ 228 (792)
......|.|.|.|..|++....+. .+.|.|.++. ++|+|+|+|.+|+++||+||+.|+...+|
T Consensus 62 -~~~~~~p~g~I~L~~~~v~~~~~~~kr~~~F~l~t~~~~~yl~qA~s~~e~~~Wi~aI~~~i~~~~~ 128 (129)
T 2p0d_A 62 -GPAGSRPESSVDLRGAALAHGRHLSSRRNVLHIRTIPGHEFLLQSDHETELRAWHRALRTVIERLVR 128 (129)
T ss_dssp ------CCSEEEECTTCEEEECTTSCSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHHHHHH
T ss_pred -cccCCCCccEEEeCCcEEEECCCCCCCCcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHhccC
Confidence 001346899999999998754322 4679999875 68999999999999999999999987664
No 43
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=99.67 E-value=2.4e-16 Score=145.15 Aligned_cols=92 Identities=20% Similarity=0.295 Sum_probs=73.8
Q ss_pred ceEEEEEeecC----CCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccC
Q 003839 94 GISGVLYKWVN----YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (792)
Q Consensus 94 ~~~G~L~K~~n----~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~ 169 (792)
+++|||.|+.+ ..+.||+|||||+++.|+|||++.+
T Consensus 1 tkeG~L~kK~g~~~~~~k~Wk~rwfvL~~~~L~~yk~~~~---------------------------------------- 40 (112)
T 3cxb_B 1 TKEGMLHYKAGTSYLGKEHWKTCFVVLSNGILYQYPDRTD---------------------------------------- 40 (112)
T ss_dssp CEEEEEEECCSCCCSSCCCCEEEEEEEETTEEEEESSSSC----------------------------------------
T ss_pred CceEEEEEeCCCCCCCCCCceEEEEEEECCEEEEECCCCC----------------------------------------
Confidence 47999997743 6789999999999999999997643
Q ss_pred CCcceEEEcCceEEE---e--cCCCCCcEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 170 RKPFGEVHLKVSSIR---D--SKSDDKRFSIFTG-TKRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 170 ~~p~G~I~L~~ssi~---~--~~~d~~~F~I~t~-~k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
..|.|.|+|..+++. . .....+.|.|.+. .++|+|+|+|.+|+++||+||+.++..
T Consensus 41 ~~p~~~i~l~~~~~~~~~~~~~~~r~~~F~l~~~~~~~y~f~A~s~ee~~~Wi~ai~~~~~~ 102 (112)
T 3cxb_B 41 VIPLLSVNMGGEQCGGCRRANTTDRPHAFQVILSDRPCLELSAESEAEMAEWMQHLCQAVSK 102 (112)
T ss_dssp CSCSEEEETTC-CEEEEEECCCSSCTTEEEEEETTSCCEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred CCccceEEecCCEEEeeeccCCCCCCeEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHhhc
Confidence 236799999866433 2 2233678999865 679999999999999999999998875
No 44
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=99.67 E-value=2.2e-16 Score=146.83 Aligned_cols=104 Identities=17% Similarity=0.252 Sum_probs=80.6
Q ss_pred CCCcceEEEEEeecCC--------CCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccc
Q 003839 90 IVGNGISGVLYKWVNY--------GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKE 161 (792)
Q Consensus 90 ~~~~~~~G~L~K~~n~--------~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~ 161 (792)
...+.++|||.|++.. .++|++|||||+++.|+||+++.+.. .
T Consensus 5 ~~~v~~eG~L~kk~~~~~~gk~~~~~~Wk~rwfvL~~~~L~yyk~~~~~~--------~--------------------- 55 (123)
T 1wjm_A 5 SSGEQMEGMLCRKQEMEAFGKKAANRSWQNVYCVLRRGSLGFYKDAKAAS--------A--------------------- 55 (123)
T ss_dssp CCCCCEEEEEEEEEEEEETTEECSCCCCEEEEEEEETTEEEEESSHHHHT--------T---------------------
T ss_pred CCCeEEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEEcccccc--------c---------------------
Confidence 3466899999999865 89999999999999999999754310 0
Q ss_pred cccccccCCCcceEEEcCceEEEecCC---CCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 003839 162 TTSQRLLNRKPFGEVHLKVSSIRDSKS---DDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDMFP 227 (792)
Q Consensus 162 ~~~~~~~~~~p~G~I~L~~ssi~~~~~---d~~~F~I~t~~-k~~~L~A~s~~dr~~Wi~aL~~a~~~~~ 227 (792)
....++.+.|+|..+.+....+ .++.|.|.++. ++|+|+|+|.+|+++||.||+.++...+
T Consensus 56 -----~~~~~~~~~i~l~~~~~~~~~~~~~r~~~F~i~~~~~~~~~f~A~s~~e~~~Wi~ai~~~~~~~~ 120 (123)
T 1wjm_A 56 -----GVPYHGEVPVSLARAQGSVAFDYRKRKHVFKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAIASGP 120 (123)
T ss_dssp -----TCBSSSCCCEECTTCEEEECTTCSSCSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHHCC
T ss_pred -----CcccCCCceEEccCcEEeecccccCCCCEEEEEEcCCcEEEEECCCHHHHHHHHHHHHHHHhccC
Confidence 0011234578888777665433 36779998876 8999999999999999999999998643
No 45
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=99.67 E-value=2.4e-16 Score=161.26 Aligned_cols=101 Identities=22% Similarity=0.361 Sum_probs=84.0
Q ss_pred ccccCCCCcceEEEEEeecC----CCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhccccc
Q 003839 85 VKINDIVGNGISGVLYKWVN----YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKK 160 (792)
Q Consensus 85 ~~~~~~~~~~~~G~L~K~~n----~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~ 160 (792)
+.+.....+.++|||+|++. ..++||+|||||.++.|+||+++.+
T Consensus 98 ~~~~~l~~v~k~G~L~Kkg~~~~~~~k~WkkRwfVL~~~~L~Yyk~~~~------------------------------- 146 (211)
T 1u5e_A 98 IAAQDLPFVIKAGYLEKRRKDHSFLGFEWQKRWCALSKTVFYYYGSDKD------------------------------- 146 (211)
T ss_dssp CCGGGCSSEEEEEEEEEEEHHHHTTTCCCEEEEEEEETTEEEEESSTTC-------------------------------
T ss_pred cChhhcCCccEEEEEEEECCCCCcCCCCcEeEEEEEECCEEEEEcCCCC-------------------------------
Confidence 34444457899999999985 5789999999999999999997543
Q ss_pred ccccccccCCCcceEEEcCceEEEecC----CC--CCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 161 ETTSQRLLNRKPFGEVHLKVSSIRDSK----SD--DKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 161 ~~~~~~~~~~~p~G~I~L~~ssi~~~~----~d--~~~F~I~t~~-k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
.+|+|.|+|..+++.... .. .+.|.|.++. |+|+|+|+|.+|+++||.||+.|+..
T Consensus 147 ---------~~p~g~I~L~~~~~v~~~~~~~~~~k~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~aL~~ai~~ 209 (211)
T 1u5e_A 147 ---------KQQKGEFAIDGYDVRMNNTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFILQD 209 (211)
T ss_dssp ---------SSCSEEEECTTCEEEECGGGCSSTTGGGEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred ---------ccceEEEEeCCcEEEEcCCccccCCCCCEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 247899999999887632 11 4679999985 99999999999999999999999874
No 46
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=99.65 E-value=4.3e-16 Score=144.99 Aligned_cols=96 Identities=24% Similarity=0.374 Sum_probs=78.4
Q ss_pred CcceEEEEEee-cCCCCC-ceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccC
Q 003839 92 GNGISGVLYKW-VNYGKG-WRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (792)
Q Consensus 92 ~~~~~G~L~K~-~n~~kg-Wk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~ 169 (792)
+++++|||+|+ +..+|+ ||+|||||.+.+|+|||...+
T Consensus 11 ~VirkGWL~k~~~g~~k~~wk~rWFVLt~~~L~yyKd~~e---------------------------------------- 50 (125)
T 1dyn_A 11 LVIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDEE---------------------------------------- 50 (125)
T ss_dssp CEEEEEEEEESCCCGGGTSSEEEEEEEESSEEEEESSTTC----------------------------------------
T ss_pred ceEEEEEEEEecCccccCCceeeEEEEeccceeeecCCcc----------------------------------------
Confidence 47999999994 777775 999999999999999997654
Q ss_pred CCcceEEEcCceEEEecCC----CCCcEEEEeCC--------eEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 003839 170 RKPFGEVHLKVSSIRDSKS----DDKRFSIFTGT--------KRLHLRAETREDRFAWMEALQAVKDMFPR 228 (792)
Q Consensus 170 ~~p~G~I~L~~ssi~~~~~----d~~~F~I~t~~--------k~~~L~A~s~~dr~~Wi~aL~~a~~~~~~ 228 (792)
..|+|.|.|....|++..+ ...+|.|++++ ++|.|.|+|.+|+.+||.||..| ..+|.
T Consensus 51 ke~~G~IpL~~~~vr~v~~~~~~rk~~F~l~~~d~r~v~~~h~~y~LsA~t~ee~~~Wi~s~~ra-~v~p~ 120 (125)
T 1dyn_A 51 KEKKYMLSVDNLKLRDVEKGFMSSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFLRA-GVYPE 120 (125)
T ss_dssp SCEEEEEECTTEEEEECCSCSSSSCEEEEEEETTSSCSSTTCSSEEEEESSHHHHHHHHHHHHHT-TCEEC
T ss_pred cccceEEECCCceEeccCCCCCCCceEEEEECCCCccccccceEEEEeCCCHHHHHHHHHHHHhC-ccCcC
Confidence 2478999999999887433 35678888764 48999999999999999999655 34443
No 47
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=99.63 E-value=7.6e-16 Score=150.96 Aligned_cols=96 Identities=22% Similarity=0.307 Sum_probs=66.8
Q ss_pred CcceEEEEE----------eecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccc
Q 003839 92 GNGISGVLY----------KWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKE 161 (792)
Q Consensus 92 ~~~~~G~L~----------K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~ 161 (792)
.+.++|||+ |+++..++|++|||||+++.|+||+++.+.
T Consensus 2 dv~~eG~L~~k~~~~~~gkK~g~~~k~WkkRwfvL~~~~L~yyk~~~~~------------------------------- 50 (168)
T 2j59_M 2 DAAKEGWLHFRPLVTDKGKRVGGSIRPWKQMYVVLRGHSLYLYKDKREQ------------------------------- 50 (168)
T ss_dssp -CCEEEEEEEEECC------------CCEEEEEEEETTEEEEESCTTCC-------------------------------
T ss_pred CCcEEEEEeeeeecccCCcccCCCCCCceEEEEEEeCCEEEEEECCccc-------------------------------
Confidence 357999999 777888999999999999999999976431
Q ss_pred cccccccCCCcceEEEcCc--eEEEecC---CCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 162 TTSQRLLNRKPFGEVHLKV--SSIRDSK---SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 162 ~~~~~~~~~~p~G~I~L~~--ssi~~~~---~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
...+.|.|.|.. |.+.... ...+.|.|.+++++|+|+|+|.+|+++||.||+.|+..
T Consensus 51 -------~~~~~g~i~l~~~~~~~~~~~~~~~~~~~F~I~t~~r~~~l~A~s~~e~~~Wi~ai~~~~~~ 112 (168)
T 2j59_M 51 -------TTPSEEEQPISVNACLIDISYSETKRKNVFRLTTSDCECLFQAEDRDDMLAWIKTIQESSNL 112 (168)
T ss_dssp ---------------CEECSSCEEEECSSSCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHCCC
T ss_pred -------ccccCCceEecccceEEEeccccCCCCCEEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 012567776655 5543332 23678999999999999999999999999999999764
No 48
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=99.62 E-value=9.6e-16 Score=158.48 Aligned_cols=97 Identities=24% Similarity=0.398 Sum_probs=83.3
Q ss_pred CCCCcceEEEEEeecCCC-----CCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccc
Q 003839 89 DIVGNGISGVLYKWVNYG-----KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETT 163 (792)
Q Consensus 89 ~~~~~~~~G~L~K~~n~~-----kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~ 163 (792)
....+.++|||.|++... ++|++|||||.++.|+||+++.+
T Consensus 54 ~~~~~~k~G~L~K~g~~~~~~~~k~WkkRwfvL~~~~L~Yyk~~~~---------------------------------- 99 (228)
T 3tfm_A 54 SKQEALKQGWLHNNGGGSSTLSRRNWKKRWFVLRQSKLMYFENDSE---------------------------------- 99 (228)
T ss_dssp SCCCSSEEEEEEECGGGCSSSCGGGCEEEEEEECSSEEEEESSTTC----------------------------------
T ss_pred cCCCcceEEEEEEECCCcCCcccCCceEEEEEEeCCEEEEEeCCCC----------------------------------
Confidence 445788999999998765 89999999999999999997543
Q ss_pred cccccCCCcceEEEcCceEEEec-CCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 164 SQRLLNRKPFGEVHLKVSSIRDS-KSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 164 ~~~~~~~~p~G~I~L~~ssi~~~-~~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
..|+|.|.|..+++... ...+..|.|.++.|+|+|+|+|.+|+++||.||+.++..
T Consensus 100 ------~~~~g~I~L~~~~~v~~~~~k~~~F~I~t~~r~~~l~A~s~~e~~~Wv~aL~~~i~~ 156 (228)
T 3tfm_A 100 ------EKLKGTVEVRSAKEIIDNTNKENGIDIIMADRTFHLIAESPEDASQWFSVLSQVHSS 156 (228)
T ss_dssp ------CSEEEEEEGGGCSEEEEETTTTSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred ------cceeEEEEcCCCEEeccCCCCCcEEEEEcCCcEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 24789999998886443 344778999999999999999999999999999999863
No 49
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=99.58 E-value=5.9e-15 Score=161.81 Aligned_cols=95 Identities=25% Similarity=0.481 Sum_probs=81.5
Q ss_pred CcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCC
Q 003839 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (792)
Q Consensus 92 ~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (792)
.+.++|||+|++...++||+|||||.++.|+||+++.+ ..
T Consensus 212 ~~~k~G~L~K~g~~~k~WkkRwFVL~~~~L~Yyk~~~~----------------------------------------~~ 251 (347)
T 2r09_A 212 NPDREGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTTD----------------------------------------KE 251 (347)
T ss_dssp CCCEEEEEEEECSSSCCEEEEEEEEETTEEEEESSTTC----------------------------------------SS
T ss_pred ccccCCeeEecCCCcccceeEEEEEcCCEEEEEcCCCc----------------------------------------cC
Confidence 46899999999988999999999999999999997543 24
Q ss_pred cceEEEcCceEEEecCC--CCCcEEEEeC----------------------CeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 003839 172 PFGEVHLKVSSIRDSKS--DDKRFSIFTG----------------------TKRLHLRAETREDRFAWMEALQAVKDMF 226 (792)
Q Consensus 172 p~G~I~L~~ssi~~~~~--d~~~F~I~t~----------------------~k~~~L~A~s~~dr~~Wi~aL~~a~~~~ 226 (792)
|+|.|.|..++|..... .+..|.|.++ .|+|+|+|+|.+|+.+||.||+.|+...
T Consensus 252 p~G~I~L~~~~v~~~~~~~~~~~F~I~~~~~~~~~~~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ai~~~ 330 (347)
T 2r09_A 252 PRGIIPLENLSIREVEDPRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASISRD 330 (347)
T ss_dssp CSEEEECTTCEEEEECCSSCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHHHHCC
T ss_pred CcEEEEcCCeEEEEccCCCCCCEEEEEeCCccccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHHhcC
Confidence 78999999998776543 3667889875 4789999999999999999999998753
No 50
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=99.58 E-value=6.6e-15 Score=155.54 Aligned_cols=103 Identities=17% Similarity=0.278 Sum_probs=82.5
Q ss_pred CCcceEEEEE--------eecCC----CCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhccc
Q 003839 91 VGNGISGVLY--------KWVNY----GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKH 158 (792)
Q Consensus 91 ~~~~~~G~L~--------K~~n~----~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~ 158 (792)
..+.++|||+ |.+.. .|+|++|||||.++.|+|||++.....
T Consensus 9 ~~v~K~G~L~~k~~~~~~K~g~~~~~~~K~WkrRWfVL~~~~L~yyK~~~~~~~-------------------------- 62 (263)
T 3a8p_A 9 GVVRKAGWLFFKPLVTLQKERKLELVARRKWKQYWVTLKGCTLLFYETYGKNST-------------------------- 62 (263)
T ss_dssp -CEEEEEEEEEEEEEEEEGGGEEEECTTCCCEEEEEEEETTEEEEESSCCC-----------------------------
T ss_pred CCeEEEEEeeecccccccCCCCccCccCCCceEEEEEEcCCEEEEEecCccccc--------------------------
Confidence 4568999999 77777 899999999999999999997543100
Q ss_pred ccccccccccCCCcceEEEcCceEEEecCC---CCCcEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 003839 159 KKETTSQRLLNRKPFGEVHLKVSSIRDSKS---DDKRFSIFT-GTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (792)
Q Consensus 159 ~~~~~~~~~~~~~p~G~I~L~~ssi~~~~~---d~~~F~I~t-~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~~ 227 (792)
.....|.|.|.|..|.+....+ ..+.|.|.+ ..++|+|+|+|.+|+++||.||+.|+..++
T Consensus 63 --------~~~~~p~g~I~L~~~~v~~~~~~~kk~~~F~I~t~~~r~y~f~A~s~ee~~~Wi~aI~~a~~~~~ 127 (263)
T 3a8p_A 63 --------EQNSAPRCALFAEDSIVQSVPEHPKKEHVFCLSNSCGDVYLFQATSQTDLENWVTAIHSACASLF 127 (263)
T ss_dssp -----------CCCSEEEECTTCEEEECTTCSSCSSEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred --------ccccCccceEEcCCcEEEECCcCCCCCCEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHHHhcc
Confidence 0123588999999998875333 267899999 579999999999999999999999998765
No 51
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.56 E-value=5.4e-15 Score=164.27 Aligned_cols=95 Identities=24% Similarity=0.346 Sum_probs=78.3
Q ss_pred CCcceEEEEEeecCCC-CCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccC
Q 003839 91 VGNGISGVLYKWVNYG-KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (792)
Q Consensus 91 ~~~~~~G~L~K~~n~~-kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~ 169 (792)
..+.++|||.|++... ++||+|||||.++.|+||+++.+
T Consensus 267 ~~~~k~G~L~K~g~~~~k~WKkRwFVL~~~~L~YYk~~~d---------------------------------------- 306 (386)
T 3lju_X 267 RNYLKEGYMEKTGPKQTEGFRKRWFTMDDRRLMYFKDPLD---------------------------------------- 306 (386)
T ss_dssp CCCSEEEEEEECCTTSCSCCEEEEEEEETTEEEEESSTTC----------------------------------------
T ss_pred cccceeeeEEEECCCCCCCCcccEEEEECCEEEEEecCCC----------------------------------------
Confidence 4567899999999887 99999999999999999997654
Q ss_pred CCcceEEEcCceE----EEecCC--C-----CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 170 RKPFGEVHLKVSS----IRDSKS--D-----DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 170 ~~p~G~I~L~~ss----i~~~~~--d-----~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
..|+|.|.|..+. +..... . ...|.|.++.|+|+|+|+|.+|+++||.||+.+++.
T Consensus 307 ~~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~~F~I~t~~rty~l~A~s~~e~~~Wi~aL~~~i~~ 373 (386)
T 3lju_X 307 AFARGEVFIGSKESGYTVLHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAVDR 373 (386)
T ss_dssp SBCSEEEECCCGGGTCEEEESCCTTCCSCCSCEEEEEECSSCEEEEEESSHHHHHHHHHHHHHHHHS
T ss_pred cccceEEEeecceeeeeecccCCccccccCCCcEEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 1378999995432 332111 1 256999999999999999999999999999999875
No 52
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=99.56 E-value=5.1e-15 Score=165.34 Aligned_cols=95 Identities=20% Similarity=0.195 Sum_probs=78.9
Q ss_pred CCcceEEEEEee---cCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccc
Q 003839 91 VGNGISGVLYKW---VNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRL 167 (792)
Q Consensus 91 ~~~~~~G~L~K~---~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~ 167 (792)
.++.++|||+|+ +..+++|++|||||++|.|+||+....
T Consensus 299 ~~~~k~G~L~k~~~~g~~~~~W~rrwfvl~~~~l~y~~~~~~-------------------------------------- 340 (407)
T 4h8s_A 299 NLIQKAGYLNLRNKTGLVTTTWERLYFFTQGGNLMCQPRGAV-------------------------------------- 340 (407)
T ss_dssp SCSCCEEEEEEEEECSSSCEEEEEEEEEECSSCEECCCTTCS--------------------------------------
T ss_pred CcceeeceeeeeccCCCCCCCceEEEEEEECCEEEEEeCCCC--------------------------------------
Confidence 467899999998 445688999999999999999984321
Q ss_pred cCCCcceEEEcCceEEEecCCCCC--cEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 003839 168 LNRKPFGEVHLKVSSIRDSKSDDK--RFSIFTGT--KRLHLRAETREDRFAWMEALQAVKDMF 226 (792)
Q Consensus 168 ~~~~p~G~I~L~~ssi~~~~~d~~--~F~I~t~~--k~~~L~A~s~~dr~~Wi~aL~~a~~~~ 226 (792)
.+.|.|.|..|+|+.....++ +|.|.+++ ++|+|+|+|.+||..||.||+.|++..
T Consensus 341 ---~~~~~~~l~~~~v~~~~~~~r~~cF~i~~~~~~~~~~l~A~s~~e~~~Wi~ai~~a~~~~ 400 (407)
T 4h8s_A 341 ---AGGLIQDLDNCSVMAVDCEDRRYCFQITTPNGKSGIILQAESRKENEEWICAINNISRQI 400 (407)
T ss_dssp ---SCCCCBCSSCCEEEEECCTTCSSEEEEECTTSSCCEEEECSSSHHHHHHHHHHHHHHSCC
T ss_pred ---CCCeEEECCceEEEECCCCCCCceEEEEecCCCceEEEEcCCHHHHHHHHHHHHHHHHHh
Confidence 256788999999988766655 57788875 689999999999999999999998753
No 53
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=99.55 E-value=8.6e-15 Score=154.72 Aligned_cols=97 Identities=20% Similarity=0.317 Sum_probs=75.8
Q ss_pred CCcceEEEEEeecCCCCCceeeEEEEeCC-------eEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccc
Q 003839 91 VGNGISGVLYKWVNYGKGWRPRWFVLQDG-------VLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETT 163 (792)
Q Consensus 91 ~~~~~~G~L~K~~n~~kgWk~RwFVL~~g-------~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~ 163 (792)
..+.++|||.|+ |+||+|||||.++ .|+||+++.+..
T Consensus 8 ~~v~k~G~L~K~----K~WkkRwFVL~~~~~~G~~~~L~YYk~~~~~~-------------------------------- 51 (264)
T 1qqg_A 8 SDVRKVGYLRKP----KSMHKRFFVLRAASEAGGPARLEYYENEKKWR-------------------------------- 51 (264)
T ss_dssp -CEEEEEEEECT----TTCCEEEEEEECCBTTTBSSEEEEESSHHHHH--------------------------------
T ss_pred CCccEEEEEEEC----CCCEeEEEEEECCCCCCCCCEEEEECCCcccc--------------------------------
Confidence 456899999998 8999999999887 999999653200
Q ss_pred cccccCCCcceEEEcCceE-EEec--CCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 003839 164 SQRLLNRKPFGEVHLKVSS-IRDS--KSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (792)
Q Consensus 164 ~~~~~~~~p~G~I~L~~ss-i~~~--~~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~ 226 (792)
....+|+|.|+|..+. |... ......|.|.++.|+|+|+|+|.+|+++||.||+.++...
T Consensus 52 ---~~~~~p~g~I~L~~~~~V~~~~~~~~~~~F~I~t~~rty~l~A~se~e~~~Wi~aL~~~~~~~ 114 (264)
T 1qqg_A 52 ---HKSSAPKRSIPLESCFNINKRADSKNKHLVALYTRDEHFAIAADSEAEQDSWYQALLQLHNRA 114 (264)
T ss_dssp ---TTCSCCSEEEEGGGEEEEEEECCSSCSSEEEEEESSCEEEEECSSHHHHHHHHHHHHHHC---
T ss_pred ---ccccCcceEEEeeceEEEEeccCCCCCcEEEEEECCEEEEEEeCCHHHHHHHHHHHHHHHHhc
Confidence 0012589999999886 4322 2336789999999999999999999999999999997653
No 54
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=99.55 E-value=7e-15 Score=136.80 Aligned_cols=103 Identities=17% Similarity=0.259 Sum_probs=77.7
Q ss_pred CCcceEEEEEeecC--------CCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhccccccc
Q 003839 91 VGNGISGVLYKWVN--------YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKET 162 (792)
Q Consensus 91 ~~~~~~G~L~K~~n--------~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~ 162 (792)
.++.++|||.|+.. ..+.|++|||||+++.|+||+++.+.... +
T Consensus 6 ~~v~k~G~L~rK~~~~~~gkk~~~~~Wk~rw~vL~~~~L~~yk~~~~~~~~------------~---------------- 57 (122)
T 1dro_A 6 AGEGHEGYVTRKHEWDSTTKKASNRSWDKVYMAAKAGRISFYKDQKGYKSN------------P---------------- 57 (122)
T ss_dssp SSSSEEEEEEEECSCCCCCCTTCCCCCEEEEEEESSSCCBEESSSSHHHHC------------T----------------
T ss_pred CceEEEEEEEEEEEEeCCCccCCCCCccEEEEEEECCEEEEEeCCcccccC------------C----------------
Confidence 46789999998743 46889999999999999999976541100 0
Q ss_pred ccccccCCCcceEEEcCceEEEecCC---CCCcEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 163 TSQRLLNRKPFGEVHLKVSSIRDSKS---DDKRFSIFT-GTKRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 163 ~~~~~~~~~p~G~I~L~~ssi~~~~~---d~~~F~I~t-~~k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
.....+.+.|+|..|.+....+ ..+.|.|.+ +.++|.|+|+|.+|+++||.||+.|+..
T Consensus 58 ----~~~~~~~~~i~L~~~~v~~~~d~~kr~~~F~l~t~~~~~~lfqA~s~~e~~~Wi~ai~~~i~~ 120 (122)
T 1dro_A 58 ----ELTFRGEPSYDLQNAAIEIASDYTKKKHVLRVKLANGALFLLQAHDDTEMSQWVTSLKAQSDS 120 (122)
T ss_dssp ----TCCSSCCCBCCCSSCCCEECCSSSSSTTEEEEECSSSCEEEEECSSSHHHHHHHHHHHHHHTC
T ss_pred ----CcccCCCceEECCCCEEEeCCCCCCCCeEEEEEEcCCCEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 0011235789998887654332 256799986 5689999999999999999999999864
No 55
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=99.54 E-value=1.3e-14 Score=160.77 Aligned_cols=93 Identities=18% Similarity=0.242 Sum_probs=75.9
Q ss_pred CcceEEEEEeecCCC---CCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhccccccccccccc
Q 003839 92 GNGISGVLYKWVNYG---KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (792)
Q Consensus 92 ~~~~~G~L~K~~n~~---kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~ 168 (792)
.+.++|||+|++..+ +.|++|||||++|.|+||+. ++
T Consensus 277 ~~~k~G~L~K~~~~~~~~~~WkkRwfvL~~~~L~y~k~-~~--------------------------------------- 316 (385)
T 2q13_A 277 LTRKAGYLNARNKTGLVSSTWDRQFYFTQGGNLMSQAR-GD--------------------------------------- 316 (385)
T ss_dssp CSCCEEEEEEC--------CCEEEEEEEETTEEEEECS-SC---------------------------------------
T ss_pred CccEEEEEEEecCCCCCcCCceeEEEEEECCEEEEecC-CC---------------------------------------
Confidence 668999999998652 46999999999999999997 22
Q ss_pred CCCcceEEEcCceEEEecCCC--CCcEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 169 NRKPFGEVHLKVSSIRDSKSD--DKRFSIFTGT--KRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 169 ~~~p~G~I~L~~ssi~~~~~d--~~~F~I~t~~--k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
..|.|.|+|..|+|...... .++|.|.+++ ++|+|+|+|.+||+.||.||+.|+..
T Consensus 317 -~~~~~~i~l~~~~v~~~~~~~r~~~F~i~t~~~~~~~~l~A~s~~e~~~Wi~ai~~~~~~ 376 (385)
T 2q13_A 317 -VAGGLAMDIDNCSVMAVDCEDRRYCFQITSFDGKKSSILQAESKKDHEEWICTINNISKQ 376 (385)
T ss_dssp -SSCEEEEECTTCEEEEECCTTCSSEEEEECTTSCBCCCEECSSHHHHHHHHHHHHHHHTT
T ss_pred -cCCCceEEccceEEEeccccCCCceEEEEeCCCCeEEEEEeCCHHHHHHHHHHHHHHHHh
Confidence 12569999999998776544 3578899998 99999999999999999999999875
No 56
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=99.50 E-value=4.6e-14 Score=156.82 Aligned_cols=93 Identities=18% Similarity=0.339 Sum_probs=77.1
Q ss_pred CcceEEEEEeecCCCCCceeeEEEE--eCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccC
Q 003839 92 GNGISGVLYKWVNYGKGWRPRWFVL--QDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (792)
Q Consensus 92 ~~~~~G~L~K~~n~~kgWk~RwFVL--~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~ 169 (792)
...++|||+|+|...++|++||||| .++.|+||+++.+
T Consensus 145 ~~~keG~L~KrG~~~k~WkrRwFVL~~~~~~L~Yy~~~~~---------------------------------------- 184 (386)
T 3lju_X 145 AGYREGFLWKRGRDNGQFLSRKFVLTEREGALKYFNRNDA---------------------------------------- 184 (386)
T ss_dssp SSEEEEEEEEECSSSCCEEEEEEEEETTTTEEEEEC--------------------------------------------
T ss_pred ccccccceeeeccccCCceEEEEEEEcCCCEEEEECCCCc----------------------------------------
Confidence 4679999999999999999999999 8999999997543
Q ss_pred CCcceEEEcCceEEEecC---CCCCcEEEE----eCCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003839 170 RKPFGEVHLKVSSIRDSK---SDDKRFSIF----TGTKRLHLRAETREDRFAWMEALQAVKD 224 (792)
Q Consensus 170 ~~p~G~I~L~~ssi~~~~---~d~~~F~I~----t~~k~~~L~A~s~~dr~~Wi~aL~~a~~ 224 (792)
..|+|.|.|....+.... ..+..|.|. +++|+|+|+|+|.+|+.+||+||+.|+.
T Consensus 185 ~~p~g~I~L~~~~~~~~~~~~~~~~~f~I~~~~~~~~R~y~l~A~s~~e~~~Wi~aIr~a~~ 246 (386)
T 3lju_X 185 KEPKAVMKIEHLNATFQPAKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAARF 246 (386)
T ss_dssp -CCSEEEEGGGEEEEECHHHHTSTTCEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred cCcccEEEeeccEEEEcccccCCCceEEEEEecCCCceEEEEEcCCHHHHHHHHHhhhhccc
Confidence 248999999987655532 357889887 6779999999999999999999998854
No 57
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=99.48 E-value=9.7e-14 Score=147.05 Aligned_cols=95 Identities=17% Similarity=0.257 Sum_probs=73.9
Q ss_pred CCCCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhccccccccccccc
Q 003839 89 DIVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (792)
Q Consensus 89 ~~~~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~ 168 (792)
....+.++|||+|++...++||+|||||+++.|+||++..+.
T Consensus 164 ~~~~p~~~G~L~k~~~~~k~WkkR~fvL~~~~L~yyk~~~~~-------------------------------------- 205 (291)
T 3tca_A 164 SIIVPELEGALYLKEDGKKSWKRRYFLLRASGIYYVPKGKTK-------------------------------------- 205 (291)
T ss_dssp SCCCCCCEEEEEEECTTSSCEEEEEEEECSSEEEECCTTCCS--------------------------------------
T ss_pred CCCCCceEEEEEEeCCCCCCceEEEEEEeCCEEEEEecCccc--------------------------------------
Confidence 345678999999999999999999999999999999976542
Q ss_pred CCCcceE---EEcCceEEEecC--------CCCCcEEEEeCC------eEEEEEcCCHHHHHHHHHHHHHHH
Q 003839 169 NRKPFGE---VHLKVSSIRDSK--------SDDKRFSIFTGT------KRLHLRAETREDRFAWMEALQAVK 223 (792)
Q Consensus 169 ~~~p~G~---I~L~~ssi~~~~--------~d~~~F~I~t~~------k~~~L~A~s~~dr~~Wi~aL~~a~ 223 (792)
.|+|. ++|.++.+.... ..+..|.|.++. ++|+|+|+|.+|+..||.||+.|+
T Consensus 206 --~~~~~i~l~~l~~~~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~~~~l~A~s~~e~~~Wi~air~Ak 275 (291)
T 3tca_A 206 --TSRDLACFIQFENVNIYYGIQCKMKYKAPTDHCFVLKHPQIQKESQYIKYLCCDDARTLSQWVMGIRIAK 275 (291)
T ss_dssp --STTTCEEEEEGGGCEEEEECSHHHHHCCSSSCEEEEECTTCCSCCTTSEEEECSSHHHHHHHHHHHHHHH
T ss_pred --cccCceeeccceeEEEEecCccccccCCCCCeEEEEEcCCCCCCCceEEEEECCCHHHHHHHHHHHHHHh
Confidence 13444 445555554322 225678898753 569999999999999999999886
No 58
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=99.45 E-value=3.9e-13 Score=125.94 Aligned_cols=106 Identities=18% Similarity=0.253 Sum_probs=75.6
Q ss_pred CCcceEEEEEeec-----C--CCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccc
Q 003839 91 VGNGISGVLYKWV-----N--YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETT 163 (792)
Q Consensus 91 ~~~~~~G~L~K~~-----n--~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~ 163 (792)
..+.++|||+|.. . ..++|++|||||+++.|+|||++...... | ...+
T Consensus 6 ~~v~keG~L~rK~~~~~gkk~~~r~W~~~w~VL~~~~L~~yKd~~~~~~~------------~-------------~~~~ 60 (124)
T 3pp2_A 6 KTLDKAGVLHRTKTADKGKRLRKKHWSASWTVLEGGVLTFFKDSKTSAAG------------G-------------LRQP 60 (124)
T ss_dssp ---CEEEEEEEEEEEETTEECSSCCCEEEEEEEETTEEEEESCSBCC---------------C-------------BCCG
T ss_pred CcEEEEEEEEEEEeccCCccCCCCCceEEEEEEECCEEEEEecCcccccc------------C-------------ccCc
Confidence 3568999999862 1 22589999999999999999975532100 0 0000
Q ss_pred cccccCCCcceEEEcCceEEEecC-C---CCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHH
Q 003839 164 SQRLLNRKPFGEVHLKVSSIRDSK-S---DDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKD 224 (792)
Q Consensus 164 ~~~~~~~~p~G~I~L~~ssi~~~~-~---d~~~F~I~t~~-k~~~L~A~s~~dr~~Wi~aL~~a~~ 224 (792)
+ ....|.+.|.|..|.+.... + ..+.|.|.+++ ++|.|+|+|.+|+++||.+|+.|++
T Consensus 61 ~---~~~~~~~~i~L~~a~v~~~~~d~~krk~vF~l~t~~~~~ylfqA~s~~e~~~Wi~aI~~aI~ 123 (124)
T 3pp2_A 61 S---KFSTPEYTVELRGATLSWAPKDKSSRKNVLELRSRDGSEYLIQHDSEAIISTWHKAIAQGIQ 123 (124)
T ss_dssp G---GGCSEEEEEECTTCEEEECCGGGCSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHHC
T ss_pred c---cccCCcceEEcCCCEEEecccccCCCceEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHh
Confidence 0 00247799999999876642 2 25679998864 7999999999999999999999975
No 59
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=99.45 E-value=1e-13 Score=129.03 Aligned_cols=94 Identities=19% Similarity=0.307 Sum_probs=71.9
Q ss_pred ceEEEEEe--ecCCCC-CceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCC
Q 003839 94 GISGVLYK--WVNYGK-GWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (792)
Q Consensus 94 ~~~G~L~K--~~n~~k-gWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (792)
.++|||.+ .++..+ +|++|||||.++.|+||+.+.+ ....
T Consensus 2 ~~eGwl~~pk~~~~~k~~Wkkr~~vL~~~kL~~y~~~~~-------------------------------------~~~~ 44 (117)
T 2rov_A 2 RLEGWLSLPVRNNTKKFGWVKKYVIVSSKKILFYDSEQD-------------------------------------KEQS 44 (117)
T ss_dssp CSEEEEECCCCSSSSCCCCCEEEEEEETTEEEEESCHHH-------------------------------------HHTT
T ss_pred ceEEEEEeecCCCccCCCcEEEEEEEECCEEEEEECCCC-------------------------------------cccC
Confidence 46999996 788888 9999999999999999997432 0122
Q ss_pred CcceEEEcCceEE-Eec---------CC-CCCcEEEEeC------CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003839 171 KPFGEVHLKVSSI-RDS---------KS-DDKRFSIFTG------TKRLHLRAETREDRFAWMEALQAVKD 224 (792)
Q Consensus 171 ~p~G~I~L~~ssi-~~~---------~~-d~~~F~I~t~------~k~~~L~A~s~~dr~~Wi~aL~~a~~ 224 (792)
.|.|.|+|....- +.. +. .++.|.|.+. .++|+|.|+|.+|++.||.||+.++.
T Consensus 45 ~p~~~Idl~~~~~V~~V~~~d~i~~~~~~~p~iF~I~~~~~~~~~~~~l~l~A~s~~e~~~WV~aL~~~i~ 115 (117)
T 2rov_A 45 NPYMVLDIDKLFHVRPVTQTDVYRADAKEIPRIFQILYANEGISSAKNLLLLANSTEEQQKWVSRLVKKIP 115 (117)
T ss_dssp CCSEEECGGGEEEEEECCTTTCSSSCTTTGGGEEEEEECSSSSTTCEEEEEECSSHHHHHHHHHHHHHHCT
T ss_pred CceEEEECcccEEEEEcccccccccccccCCcEEEEEeCCCCCCCCcEEEEEeCCHHHHHHHHHHHHHHhc
Confidence 4789999965432 111 11 1456999763 58999999999999999999998764
No 60
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=99.43 E-value=1.2e-12 Score=123.28 Aligned_cols=103 Identities=15% Similarity=0.222 Sum_probs=78.6
Q ss_pred ceEEEEEee-----cCC--CCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhccccccccccc
Q 003839 94 GISGVLYKW-----VNY--GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQR 166 (792)
Q Consensus 94 ~~~G~L~K~-----~n~--~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~ 166 (792)
.++|+|.+. |.. .+.|++|||||.+..|+||+.+.-.. .+ . .
T Consensus 2 ~~~G~L~rk~llK~G~k~~~ksWkr~W~vL~g~~L~yf~~~~~~~---------------~~-------------~---~ 50 (126)
T 2dtc_A 2 TMEGPLRRKTLLKEGRKPALSSWTRYWVVLSGATLLYYGAKSLRG---------------TD-------------R---K 50 (126)
T ss_dssp CEEEEEEEEEEEBTTBCCSSCCCEEEEEEEETTEEEEEEBSSSCC---------------SS-------------G---G
T ss_pred ceeeeeeeeehhhcCCcccccCcccEEEEEeCCEEEEEccccccc---------------cc-------------c---c
Confidence 578999854 553 68899999999999999999653110 00 0 0
Q ss_pred ccCCCcceEEEcCceEEEecCC--CCCcEEEEeC--CeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 003839 167 LLNRKPFGEVHLKVSSIRDSKS--DDKRFSIFTG--TKRLHLRAETREDRFAWMEALQAVKDMFP 227 (792)
Q Consensus 167 ~~~~~p~G~I~L~~ssi~~~~~--d~~~F~I~t~--~k~~~L~A~s~~dr~~Wi~aL~~a~~~~~ 227 (792)
.....|.|.|.|.++.|..... .+..|.|.++ +..|.|+|+|.+++..||+||+.|+...+
T Consensus 51 ~~~~~P~~~i~L~g~~V~~~e~~~~~~~F~L~~~~~G~~Y~fqA~s~~~~~~W~~ai~~a~~~~~ 115 (126)
T 2dtc_A 51 HYKSTPGKKVSIVGWMVQLPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSSR 115 (126)
T ss_dssp GBCSSCSEEEECTTCEEECCCCTTSTTEEEEECTTSCSEEEEECSSHHHHHHHHHHHHHHHTSCC
T ss_pred ccccCCCceEEeCCCEEEecCCCCCCCEEEEeeCCCCCEEEEeCCCHHHHHHHHHHHHHHHhcCC
Confidence 1123689999999999974322 3567999975 57899999999999999999999998654
No 61
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.42 E-value=2.5e-13 Score=128.48 Aligned_cols=96 Identities=20% Similarity=0.376 Sum_probs=75.9
Q ss_pred CCcceEEEEEeec---CCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccc
Q 003839 91 VGNGISGVLYKWV---NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRL 167 (792)
Q Consensus 91 ~~~~~~G~L~K~~---n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~ 167 (792)
..|.+++||...+ ...|+||+|||||.++.|+|||++.+.
T Consensus 7 ~~pel~~~l~~~~pkk~tlK~~KrrWFvlk~~~L~YyK~kee~------------------------------------- 49 (137)
T 2ys3_A 7 GIPELKDHLRIFRPRKLTLKGYRQHWVVFKETTLSYYKSQDEA------------------------------------- 49 (137)
T ss_dssp SCCCEECCCEECCTTSCCSSSSCCCEEEECSSCEEEESSTTTT-------------------------------------
T ss_pred CCcchhHHHHhhCccccccccceeEEEEEeCCEEEEECCchhc-------------------------------------
Confidence 3578899999874 346799999999999999999986641
Q ss_pred cCCCcceEEEcCceEEEecCC-CCCcEE--EEeC----CeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003839 168 LNRKPFGEVHLKVSSIRDSKS-DDKRFS--IFTG----TKRLHLRAETREDRFAWMEALQAVKD 224 (792)
Q Consensus 168 ~~~~p~G~I~L~~ssi~~~~~-d~~~F~--I~t~----~k~~~L~A~s~~dr~~Wi~aL~~a~~ 224 (792)
...|.|.|+|.+|.|..+.. ....|. +..+ .++|+|+|+|+++++.||.||+.|..
T Consensus 50 -~~ePig~I~L~gceV~pd~~~~~~kf~ikl~iPs~~g~r~y~l~cdsEeqy~~WMaA~rlAsk 112 (137)
T 2ys3_A 50 -PGDPIQQLNLKGCEVVPDVNVSGQKFCIKLLVPSPEGMSEIYLRCQDEQQYARWMAGCRLASK 112 (137)
T ss_dssp -TSCCSCCBCTTTCEEEECCBGGGTBEEEEEEEECSSSEEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred -cCCCceEEECCCCEEeccccccCCceEEEEEccCCCCceEEEEECCCHHHHHHHHHHHHHhcc
Confidence 12488999999999876631 244554 4443 49999999999999999999997753
No 62
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}
Probab=99.36 E-value=2.4e-12 Score=123.37 Aligned_cols=96 Identities=20% Similarity=0.367 Sum_probs=71.9
Q ss_pred CCcceEEEEEeec---CCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccc
Q 003839 91 VGNGISGVLYKWV---NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRL 167 (792)
Q Consensus 91 ~~~~~~G~L~K~~---n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~ 167 (792)
..+.+++||.... -..|+||+||||++|+.|+|||++.+.
T Consensus 24 ~iPeL~dyLk~~~pkrltLKgfKryWfv~kDt~LsyYKSkEe~------------------------------------- 66 (165)
T 4bbk_A 24 DIPKLADYLKLFRPKKLMLKACKQYWFVFKDTSIAYFKNKELE------------------------------------- 66 (165)
T ss_dssp --CCEEEEEEEEC-------CCEEEEEEEETTEEEEESSGGGT-------------------------------------
T ss_pred cChhhHhHHHhhcccccccccceeEEEEEeCCEEEEEcCHHHh-------------------------------------
Confidence 3567899997753 357999999999999999999987541
Q ss_pred cCCCcceEEEcCceEEEecCC-CCCcEEEE----e--CCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003839 168 LNRKPFGEVHLKVSSIRDSKS-DDKRFSIF----T--GTKRLHLRAETREDRFAWMEALQAVKD 224 (792)
Q Consensus 168 ~~~~p~G~I~L~~ssi~~~~~-d~~~F~I~----t--~~k~~~L~A~s~~dr~~Wi~aL~~a~~ 224 (792)
...|.+.|+|++|.|..+.. ...+|.|. + |...++|+|+|+.++.+||.|++-|..
T Consensus 67 -~geP~~~inLrGCEVtPDVnva~~Kf~ikL~ip~~~gm~e~~LrcdsE~QYa~WMAAcrLAsk 129 (165)
T 4bbk_A 67 -QGEPIEKLNLRGCEIVPDVNVSGRKFGIKLLIPVADGMNEVYLRCDHEDQYARWMAACILASK 129 (165)
T ss_dssp -TSCCSEEEECTTCEEEEEEETTTTEEEEEEEEEETTEEEEEEEEESSHHHHHHHHHHHHHHHT
T ss_pred -cCCCceEEecCccEEecccccccceeeEEEecCCCCcceeeeeecCCHHHHHHHHHHhhhccc
Confidence 12488999999999986532 34455432 2 346799999999999999999999876
No 63
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=99.35 E-value=5e-12 Score=121.66 Aligned_cols=128 Identities=20% Similarity=0.235 Sum_probs=79.3
Q ss_pred ceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccc---------c
Q 003839 94 GISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETT---------S 164 (792)
Q Consensus 94 ~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~---------~ 164 (792)
.++|||+|+....+.|++|||||.+..|+|++......=....+..+ -.+....+ .++-..|..+.. |
T Consensus 2 ~k~G~L~~~~~~~~~w~~~~fvL~~~~L~y~~e~s~~~~~~~~e~~~--~~~~~~~~-~~~~n~~fh~~~~~~~e~~~~~ 78 (150)
T 2fjl_A 2 IKNGILYLEDPVNHEWYPHYFVLTSSKIYYSEETSSDQGNEDEEEPK--EASGSTEL-HSSLEVLFQGPNPAILEPEREH 78 (150)
T ss_dssp CEEEEEEEEETTTTEEEEEEEEEETTEEEECCCCSCSSCCSCCCCSC--CCCCSCCC-CCCSSSGGGSSCSTTSCTTCSS
T ss_pred CcceEEEeecCCCCCceEeEEEEECCEEEEEeeccccccccCccccc--ccCCchhh-cccchhccccCCccccchhHhc
Confidence 57999999999999999999999999999998332110000000000 00000000 000000000000 0
Q ss_pred ---ccccCCCcceEEEcCceEEEecCC----CCCcEEEEeCC---eEEEEEcCCHHHHHHHHHHHHHHHH
Q 003839 165 ---QRLLNRKPFGEVHLKVSSIRDSKS----DDKRFSIFTGT---KRLHLRAETREDRFAWMEALQAVKD 224 (792)
Q Consensus 165 ---~~~~~~~p~G~I~L~~ssi~~~~~----d~~~F~I~t~~---k~~~L~A~s~~dr~~Wi~aL~~a~~ 224 (792)
..-++.-.+|.|.|.+|.|..... ....|.|.+++ ++|.|.|+|.+|+.+||+||+.|+.
T Consensus 79 l~E~~~lG~l~kG~IdL~gc~V~~~~~~~~~~~~vF~I~~~~~~~~~~~laAds~Eem~dW~kaIreaa~ 148 (150)
T 2fjl_A 79 LDENSPLGDLLRGVLDVPACQIAIRPEGKNNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVAQ 148 (150)
T ss_dssp SCTTTTTTTCCCEEECSTTCEEEEETTCSSSCSCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHHHT
T ss_pred ccccccccccccceEecCccEEEeccCCCCCCceEEEEeCCCCCCceEEEEeCCHHHHHHHHHHHHHHHh
Confidence 001222358999999999976543 24567888864 5899999999999999999999975
No 64
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*
Probab=99.27 E-value=1.9e-11 Score=118.33 Aligned_cols=96 Identities=18% Similarity=0.332 Sum_probs=75.9
Q ss_pred CcceEEEEEeec---CCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhccccccccccccc
Q 003839 92 GNGISGVLYKWV---NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (792)
Q Consensus 92 ~~~~~G~L~K~~---n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~ 168 (792)
-|.+++||.... -..||||+||||++|+.|+|||++.+.
T Consensus 46 iPeL~dyLk~~~pk~~tLKgyKryWFv~kd~~LsyYKskEe~-------------------------------------- 87 (173)
T 4f7h_A 46 IPELADYIKVFKPKKLTLKGYKQYWCTFKDTSISCYKSKEES-------------------------------------- 87 (173)
T ss_dssp TTCEEEEEEEECCBTTBCCCCEEEEEEEETTEEEEESCGGGC--------------------------------------
T ss_pred ChhhHhHHHhhcchhcccccceeEEEEEeCCEEEEEcCHhHh--------------------------------------
Confidence 467999997643 357999999999999999999987541
Q ss_pred CCCcceEEEcCceEEEecCCC-CCcEEEE---e---CCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 169 NRKPFGEVHLKVSSIRDSKSD-DKRFSIF---T---GTKRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 169 ~~~p~G~I~L~~ssi~~~~~d-~~~F~I~---t---~~k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
...|.|.|+|++|.|..+..- ..+|.|. . +...++|+|+|++.+..||.|++-|..-
T Consensus 88 ~geP~~~I~LrGCEVtpDVnva~~Kf~IkL~vP~~~gm~e~~Lrcd~E~qya~WMAAcrLAskG 151 (173)
T 4f7h_A 88 SGTPAHQMNLRGCEVTPDVNISGQKFNIKLLIPVAEGMNEIWLRCDNEKQYAHWMAACRLASKG 151 (173)
T ss_dssp SSCCSEEEECTTCEEEEEEETTTTEEEEEEEEEETTEEEEEEEEESSHHHHHHHHHHHHHHHTT
T ss_pred cCCCceEEecCceEEeccccccccceeEEEeccCCCCcceeeeecCCHHHHHHHHHHhhhhccC
Confidence 124889999999999875332 4555432 2 4578999999999999999999998663
No 65
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.23 E-value=6.1e-11 Score=110.24 Aligned_cols=96 Identities=19% Similarity=0.207 Sum_probs=74.3
Q ss_pred CCcceEEEEEeec--CCCCCceeeEEEEeC------CeEEEEeecCCCccccchhhcccccccccchhhhhhhccccccc
Q 003839 91 VGNGISGVLYKWV--NYGKGWRPRWFVLQD------GVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKET 162 (792)
Q Consensus 91 ~~~~~~G~L~K~~--n~~kgWk~RwFVL~~------g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~ 162 (792)
..+.++|||+++. .++|.||+|||||.. .-|-||..+..-
T Consensus 10 e~~vk~G~L~~q~q~~fgkKWrk~w~vLy~~S~~GvaRLE~yd~~ek~-------------------------------- 57 (127)
T 2d9w_A 10 DGAVKQGFLYLQQQQTFGKKWRRFGASLYGGSDCALARLELQEGPEKP-------------------------------- 57 (127)
T ss_dssp CCSSEEEEEEECBCSSSSCBCCEEEEEEECCSSSSCCEEEEECCCSCS--------------------------------
T ss_pred CccccceEEEecccchhhhhhheeEEEEecCCCCCceeeeeeeccCcc--------------------------------
Confidence 3578999999997 688999999999943 358999975431
Q ss_pred ccccccCCCcceEEEcCceE-EEecCCC------CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003839 163 TSQRLLNRKPFGEVHLKVSS-IRDSKSD------DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (792)
Q Consensus 163 ~~~~~~~~~p~G~I~L~~ss-i~~~~~d------~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~ 223 (792)
..+..++..|.|+.|. |.+...+ ...|.|.|..|+|.|.|++ .++.+||++|...+
T Consensus 58 ----~r~~~~rrVIrLsdCisV~~~~~e~~~pk~~~aF~l~T~er~~~laAe~-~E~~~Wi~~ic~~a 120 (127)
T 2d9w_A 58 ----RRCEAARKVIRLSDCLRVAEAGGEASSPRDTSAFFLETKERLYLLAAPA-AERGDWVQAICLLA 120 (127)
T ss_dssp ----SSCSCCEEEECGGGEEEEEECCSCSSSCSSCEEEEEEESSCEEEEEECH-HHHHHHHHHHHHHH
T ss_pred ----ccCCCCceEEEhhhCCeEecccCccCCCCcceEEEEEeCCcEEEEEeCc-HHHHHHHHHHHHHh
Confidence 1223578999999886 4443322 3568999999999999996 48999999997653
No 66
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.23 E-value=1.5e-11 Score=137.82 Aligned_cols=95 Identities=32% Similarity=0.431 Sum_probs=70.7
Q ss_pred CCcceEEEEEeecCCCCCceeeEEEEe-CCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccC
Q 003839 91 VGNGISGVLYKWVNYGKGWRPRWFVLQ-DGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (792)
Q Consensus 91 ~~~~~~G~L~K~~n~~kgWk~RwFVL~-~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~ 169 (792)
..+.++|||.|+|...|.||+|||||+ +|.|.|||.+...
T Consensus 4 ~~v~keG~L~K~g~~~k~Wk~r~fvL~~~~~l~yyk~~~~~--------------------------------------- 44 (446)
T 4ejn_A 4 VAIVKEGWLHKRGEYIKTWRPRYFLLKNDGTFIGYKERPQD--------------------------------------- 44 (446)
T ss_dssp CCEEEEEEEEEEETTTTEEEEEEEEEETTSBEEEESSCC-----------------------------------------
T ss_pred ceEEEEeeEEeeccccccccceEEEEeeCCEEEEEecCCCC---------------------------------------
Confidence 357899999999999999999999996 9999999976542
Q ss_pred CCcceEEEcCc-----eEEE-ecCCCCCcEEEEeCC-eEE---EEEcCCHHHHHHHHHHHHHHHHh
Q 003839 170 RKPFGEVHLKV-----SSIR-DSKSDDKRFSIFTGT-KRL---HLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 170 ~~p~G~I~L~~-----ssi~-~~~~d~~~F~I~t~~-k~~---~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
.+.|.|.|.. |.+. .....+++|.|.+.. +++ .+.|++.++++.|+.||+.++..
T Consensus 45 -~~~~~i~l~~~~~~~~~~~~~~~~~~~~f~I~~~~~~~~~~r~~~~~~~ee~e~W~~ai~~~i~~ 109 (446)
T 4ejn_A 45 -VDQREAPLNNFSVAQCQLMKTERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVADG 109 (446)
T ss_dssp ------CCCGGGBCTTCEEEEECSSSTTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHCCC
T ss_pred -CccCcccccCccccceeecCCCCCCCceeEEEcCCCceeeeeEEecCCHHHHHHHHHHHHhhhhh
Confidence 1345555554 3332 233336799998764 333 78999999999999999999764
No 67
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=99.14 E-value=1.3e-10 Score=111.81 Aligned_cols=93 Identities=19% Similarity=0.096 Sum_probs=75.7
Q ss_pred CCCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccC
Q 003839 90 IVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (792)
Q Consensus 90 ~~~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~ 169 (792)
...+.+.|||.|+.+++ ||+|||+|.++-+.||-+....
T Consensus 49 ge~Ilk~G~v~KrkGl~--~kkR~liLT~~PrL~Yvdp~~~--------------------------------------- 87 (151)
T 1w1g_A 49 NNLILKMGPVDKRKGLF--ARRRQLLLTEGPHLYYVDPVNK--------------------------------------- 87 (151)
T ss_dssp TCCEEEEEEEEEEETTE--EEEEEEEEETTTEEEEEETTTT---------------------------------------
T ss_pred CCcEEEEEEEEecccCc--ceeEEEEEcCCceEEEEcCccc---------------------------------------
Confidence 35678999999975554 9999999999999999975431
Q ss_pred CCcceEEEcCceEEEecCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 003839 170 RKPFGEVHLKVSSIRDSKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (792)
Q Consensus 170 ~~p~G~I~L~~ssi~~~~~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~ 226 (792)
..+|+|.|..+.-.+... ++.|.|.|++|+|+|.|. ..+++.|++||+.++..+
T Consensus 88 -~~KGeIpls~~l~ve~k~-~~~F~I~Tp~RtY~~~d~-~~~AqeWv~aI~~~~~~~ 141 (151)
T 1w1g_A 88 -VLKGEIPWSQELRPEAKN-FKTFFVHTPNRTYYLMDP-SGNAHKWCRKIQEVWRQR 141 (151)
T ss_dssp -EEEEEECCCTTCEEEESS-SSEEEEEETTEEEEEECT-TSCHHHHHHHHHHHHHHH
T ss_pred -cccceEecCCCeeEEEcC-CCEEEEECCCceEEEEcC-ccCHHHHHHHHHHHHHHH
Confidence 246999998754333333 679999999999999987 889999999999998764
No 68
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=99.13 E-value=6.8e-11 Score=125.38 Aligned_cols=102 Identities=17% Similarity=0.267 Sum_probs=76.4
Q ss_pred CCcceEEEEEee-----cC-------CCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhccc
Q 003839 91 VGNGISGVLYKW-----VN-------YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKH 158 (792)
Q Consensus 91 ~~~~~~G~L~K~-----~n-------~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~ 158 (792)
..+.++|||.+. +. ..+.|++|||||.+++|+||+++.....
T Consensus 9 ~~v~k~G~L~rK~~l~~~k~~K~~~~~~r~Wkk~w~VLkg~~L~fYKde~~~~~-------------------------- 62 (279)
T 3a8n_A 9 GTVRKAGALAVKNFLVHKKNKKVESATRRKWKHYWVSLKGCTLFFYETDGRSGI-------------------------- 62 (279)
T ss_dssp -CCSCEEEEEEEEEEEEETTTEEECCCCCCCEEEEEEEETTEECCBCCC-------------------------------
T ss_pred CceeEEEEEEEEEEecccCCcccCCccCCCCeEEEEEEeCCEEEEEeccccccc--------------------------
Confidence 456899999753 11 2478999999999999999997653210
Q ss_pred ccccccccccCCCcceEEEcCceEEEecCCC---CCcEEEEeC-CeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 003839 159 KKETTSQRLLNRKPFGEVHLKVSSIRDSKSD---DKRFSIFTG-TKRLHLRAETREDRFAWMEALQAVKDMF 226 (792)
Q Consensus 159 ~~~~~~~~~~~~~p~G~I~L~~ssi~~~~~d---~~~F~I~t~-~k~~~L~A~s~~dr~~Wi~aL~~a~~~~ 226 (792)
.....|.|.|.|.++++....++ .+.|.|.++ .+.|.|+|+|.+|++.||.||+.|+..+
T Consensus 63 --------~~~~~p~~~I~L~ga~v~~a~d~~kKk~vF~L~t~~g~~yLFQA~s~eEm~~WI~aI~~a~~~~ 126 (279)
T 3a8n_A 63 --------DHNSVPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTTSQTELENWITAIHSACAAA 126 (279)
T ss_dssp -----------CCCSSCCBCCSCEECCCTTSSSSCSCCCEEETTTEEEECCCSCHHHHHHHHHHHHHHHHHH
T ss_pred --------ccccCCCceEeccCcEEEeccccCCCCcEEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHHhhh
Confidence 11234789999999998743322 457999875 5789999999999999999999998864
No 69
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=99.05 E-value=8.4e-10 Score=115.77 Aligned_cols=95 Identities=22% Similarity=0.193 Sum_probs=72.7
Q ss_pred CCCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccC
Q 003839 90 IVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (792)
Q Consensus 90 ~~~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~ 169 (792)
...+.++|||+++....|.|++|||+|+++.|+||+.....
T Consensus 129 s~~P~~~G~L~~ke~~~K~WkkRyfvLr~sgLy~~~k~~sk--------------------------------------- 169 (256)
T 3hk0_A 129 SSSPEIQGFLHVKELGKKSWKKLYVCLRRSGLYCSTKGTSA--------------------------------------- 169 (256)
T ss_dssp TSCEEEEEEEEEECTTSSCEEEEEEEEETTEEEEESSTTCC---------------------------------------
T ss_pred CCCCcceeEEEEecCCCCcceEEEEEEeCCEEEEEecCCCC---------------------------------------
Confidence 35678999999998778999999999999999888853321
Q ss_pred CCcceE---EEcCceEEEecC--------CCCCcEEEEeCCe------EEEEEcCCHHHHHHHHHHHHHHHH
Q 003839 170 RKPFGE---VHLKVSSIRDSK--------SDDKRFSIFTGTK------RLHLRAETREDRFAWMEALQAVKD 224 (792)
Q Consensus 170 ~~p~G~---I~L~~ssi~~~~--------~d~~~F~I~t~~k------~~~L~A~s~~dr~~Wi~aL~~a~~ 224 (792)
.+++. ++|....|.... ..+..|+|.+... .++|+|+|++++..||.||+.|+-
T Consensus 170 -~~r~l~~~~~L~~~~vy~~~~~kKk~kaPt~~~F~ik~~k~~~~~~~~~~lcaede~~~~~W~~aIr~ak~ 240 (256)
T 3hk0_A 170 -APRHLQLLADLEDSNIFSLIAGRKQYNAPTDHGLCIKPNKVRNETKELRLLCAEDEQTRTSWMTAFRLLKY 240 (256)
T ss_dssp -CGGGEEEEECCTTEEEEEESSTHHHHCCSSSEEEEEEETTCSSCCTTCEEEEESSHHHHHHHHHHHHHHHH
T ss_pred -ccccceEEEEcCCCEEEEecccccccCCCCCCEEEEEcccccCCCceEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 12333 578777765432 2256678886533 599999999999999999999974
No 70
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=99.05 E-value=6.2e-10 Score=118.14 Aligned_cols=97 Identities=16% Similarity=0.214 Sum_probs=71.7
Q ss_pred CCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCC
Q 003839 91 VGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (792)
Q Consensus 91 ~~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (792)
..+.++|||+++....|+|++|||||+++.|+||+...... ..
T Consensus 156 ~~pe~~G~L~~k~~~~k~WkkRyfvLr~sgLyy~~K~~sk~-------------------------------------~r 198 (281)
T 4gmv_A 156 TVPEIEGVLWLKDDGKKSWKKRYFLLRASGIYYVPKGKAKV-------------------------------------SR 198 (281)
T ss_dssp CCCCCEEEEEEECTTSSCEEEEEEEECSSCEEEC----------------------------------------------
T ss_pred CCCccEEEEEEECCCCCCCeEEEEEEeCCEEEEEeCCCCCc-------------------------------------cc
Confidence 46789999999987779999999999999999888643210 01
Q ss_pred CcceEEEcCceEEEec--------CCCCCcEEEEeCC------eEEEEEcCCHHHHHHHHHHHHHHHH
Q 003839 171 KPFGEVHLKVSSIRDS--------KSDDKRFSIFTGT------KRLHLRAETREDRFAWMEALQAVKD 224 (792)
Q Consensus 171 ~p~G~I~L~~ssi~~~--------~~d~~~F~I~t~~------k~~~L~A~s~~dr~~Wi~aL~~a~~ 224 (792)
...+.++|..+.|... ...+..|+|..+. ..++|+|+|++++..||.||+.|+-
T Consensus 199 ~l~~l~~L~~~~VY~~~~~kkk~kaPt~~~F~ik~~~~~~~~~~~~~~caede~~~~~Wv~Air~ak~ 266 (281)
T 4gmv_A 199 DLVCFLQLDHVNVYYGQDYRNKYKAPTDYCLVLKHPQIQKKSQYIKYLCCDDVRTLHQWVNGIRIAKY 266 (281)
T ss_dssp CCEEEECGGGCEEEEESSHHHHTCCSCSCEEEEECTTCCSCCTTCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred cceEEEEcCCcEEEEecccccccCCCCCcEEEEecCccCCCCCceEEEEeCCHHHHHHHHHHHHHHhh
Confidence 1345668888776543 2336788998643 4699999999999999999999974
No 71
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.44 E-value=7.2e-07 Score=82.91 Aligned_cols=95 Identities=14% Similarity=0.236 Sum_probs=74.1
Q ss_pred CCCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccC
Q 003839 90 IVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (792)
Q Consensus 90 ~~~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~ 169 (792)
...++++||+-++++.-+.||+|||+|+...++||++..+
T Consensus 5 ~s~vlkeGW~VH~t~~d~~rKRHYWrLD~K~Itlf~~e~~---------------------------------------- 44 (125)
T 2coa_A 5 SSGTLREGWVVHYSNKDTLRKRHYWRLDCKCITLFQNNTT---------------------------------------- 44 (125)
T ss_dssp CCSCSEEEEEEECCSSSCCCEEEEEEECSSEEEEESSSSC----------------------------------------
T ss_pred CCceeecceEEEEccCCccccceeeEecCCeEEEEecCCC----------------------------------------
Confidence 3467899999999999999999999999999999997543
Q ss_pred CCcceEEEcCce-EEEecC--------CCCCcEEEEeCCeEEEEEcC---C--------HHHHHHHHHHHHHHHH
Q 003839 170 RKPFGEVHLKVS-SIRDSK--------SDDKRFSIFTGTKRLHLRAE---T--------REDRFAWMEALQAVKD 224 (792)
Q Consensus 170 ~~p~G~I~L~~s-si~~~~--------~d~~~F~I~t~~k~~~L~A~---s--------~~dr~~Wi~aL~~a~~ 224 (792)
.++.-+|.|..- .+.... ..+..|.|.|.+.+|++.++ . .+.+..|..||+.|..
T Consensus 45 ~~~ykeIpL~eIl~v~~~~~~~~l~~~~~~hcFEi~T~~~~yyVg~~~~~~p~~~sg~g~~~a~~W~~aIrqALm 119 (125)
T 2coa_A 45 NRYYKEIPLSEILTVESAQNFSLVPPGTNPHCFEIVTANATYFVGEMPGGTPGGPSGQGAEAARGWETAIRQALM 119 (125)
T ss_dssp SSCSEEEETTTCCEEEESCCCSSSCTTSCCEEEEEECSSCCCCEECCSCCCSSSCCCCCSHHHHHHHHHHHHHGG
T ss_pred CceeeeeehhHeecccccccccccCCCCCCceEEEEeCCeEEEEccCCCCCCCCcCccccHHHHHHHHHHHhhcc
Confidence 235567777632 333321 13588999999999999874 1 3669999999999854
No 72
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=98.39 E-value=2.2e-07 Score=95.72 Aligned_cols=41 Identities=20% Similarity=0.396 Sum_probs=35.0
Q ss_pred CCCCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCC
Q 003839 89 DIVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGP 129 (792)
Q Consensus 89 ~~~~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~ 129 (792)
+...+..+|||+|++..+|+|++|||||+++.|.||+..++
T Consensus 17 ~~~~~~~~g~l~~~~~~~~~w~~rw~vl~~~~~~~~~~~~~ 57 (228)
T 3tfm_A 17 GPGSPYFHSFLYMNGGLMNSWKRRWCVLKDETFLWFRSKQE 57 (228)
T ss_dssp ----CCEEEEEEECCTTTCCCEEEEEEEETTEEEEESSCCC
T ss_pred CCCCCceEEEEeecCcccccceEEEEEEeCCEEEEeccCCC
Confidence 45678999999999999999999999999999999997654
No 73
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.32 E-value=5.9e-06 Score=77.04 Aligned_cols=94 Identities=16% Similarity=0.236 Sum_probs=73.0
Q ss_pred CCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCC
Q 003839 91 VGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (792)
Q Consensus 91 ~~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (792)
..+.++|||-++++.-+.||++|++|+...|.||+++...
T Consensus 6 s~vlkeGWmVH~t~~d~~rKRHYWrLD~K~Itlf~~e~~~---------------------------------------- 45 (129)
T 2d9z_A 6 SGMVKEGWMVHYTSRDNLRKRHYWRLDSKCLTLFQNESGS---------------------------------------- 45 (129)
T ss_dssp TTSEEEEEEEEEESSCCCCEEEEEEEESSCEEEESCSSCC----------------------------------------
T ss_pred CceeecceEEEEccCCccccceeeEecCCeEEEEecCCCC----------------------------------------
Confidence 4568899999999999999999999999999999975432
Q ss_pred CcceEEEcCce-EEEec--------CCCCCcEEEEeCCeEEEEEcCC---------------HHHHHHHHHHHHHHHH
Q 003839 171 KPFGEVHLKVS-SIRDS--------KSDDKRFSIFTGTKRLHLRAET---------------REDRFAWMEALQAVKD 224 (792)
Q Consensus 171 ~p~G~I~L~~s-si~~~--------~~d~~~F~I~t~~k~~~L~A~s---------------~~dr~~Wi~aL~~a~~ 224 (792)
++.-+|.|..- .+... ...+..|.|.|.+.+|++.++. .+.++.|..||+.|..
T Consensus 46 k~ykeIpLseIL~v~~~~~~~~~~~~~~phcFEi~T~~~~y~Vge~~~~~~~~~~~~~sg~g~~~a~~We~aIrqALm 123 (129)
T 2d9z_A 46 KYYKEIPLSEILRISSPRDFTNISQGSNPHCFEIITDTMVYFVGENNGDSSHNPVLAATGVGLDVAQSWEKAIRQALM 123 (129)
T ss_dssp SCCCEECTTTCCEECCTTCCCCSSSCSCCCSEEEECSSCEEEECBCCSCCSCCTTTTTTTCBHHHHHHHHHHHHHHHH
T ss_pred ceeceeeHHHhcccccccCccccCCCCCCceEEEEECCEEEEEccCCCCCCCCccccccccchHHHHHHHHHHHHhcc
Confidence 24445666532 12221 1225889999999999998743 7999999999999864
No 74
>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}
Probab=97.66 E-value=0.00023 Score=71.05 Aligned_cols=104 Identities=17% Similarity=0.280 Sum_probs=77.8
Q ss_pred CCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCC
Q 003839 91 VGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (792)
Q Consensus 91 ~~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (792)
-....+|-|......+ .|+.||++|=+.+|.|-+.++. +..+.. ...
T Consensus 69 R~Ll~eG~L~~k~~~~-~~~d~~~fLf~D~Ll~~~~~~~-ky~~~~-------------------------------~~~ 115 (185)
T 2lg1_A 69 KKLVRDGSVFLKNAAG-RLKEVQAVLLTDILVFLQEKDQ-KYIFAS-------------------------------LDQ 115 (185)
T ss_dssp SCEEEEEEEEEECTTC-CEEEEEEEEESSEEECCEEETT-EEECCC-------------------------------CSS
T ss_pred CceeeeceEEEeccCC-CeeeEEEEeecCEEEEEEecCC-EEEEEc-------------------------------ccC
Confidence 3567899998555444 6999999997778888875533 222110 000
Q ss_pred CcceEEEcCceEEEecCCCCCcEEEEeC----CeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 003839 171 KPFGEVHLKVSSIRDSKSDDKRFSIFTG----TKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (792)
Q Consensus 171 ~p~G~I~L~~ssi~~~~~d~~~F~I~t~----~k~~~L~A~s~~dr~~Wi~aL~~a~~~~~~ 228 (792)
....|.|....|+....+++.|.+++. .+.|.|+|.|.+||..||++|+.|+..++.
T Consensus 116 -~~pvi~L~~~~vre~a~d~~~~fli~~~~~g~~~yel~a~s~~er~~W~~~I~~Ai~~~~~ 176 (185)
T 2lg1_A 116 -KSTVISLKKLIVREVAHEEKGLFLISMGMTDPEMVEVHASSKEERNSWIQIIQDTINTLNR 176 (185)
T ss_dssp -SCSEEESSSCEEECCSSCSSEEEEECCSSSCCCCEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCeEeecceEEeccCCCCCeEEEEEecCCCCeEEEEEcCCHHHHHHHHHHHHHHHHhCCh
Confidence 136788998989887778888887763 478999999999999999999999998753
No 75
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=97.49 E-value=0.00055 Score=64.34 Aligned_cols=39 Identities=26% Similarity=0.399 Sum_probs=32.2
Q ss_pred CCCcEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 003839 189 DDKRFSIFTGT--KRLHLRAETREDRFAWMEALQAVKDMFP 227 (792)
Q Consensus 189 d~~~F~I~t~~--k~~~L~A~s~~dr~~Wi~aL~~a~~~~~ 227 (792)
.++.|+|+.++ ++++|.|.|.+++..||.+|+.......
T Consensus 84 ~~~~FsIiy~~~~k~LdlvA~s~~e~~~Wv~gL~~L~~~~~ 124 (131)
T 1mai_A 84 EDRCFSIVFKDQRNTLDLIAPSPADAQHWVQGLRKIIHHSG 124 (131)
T ss_dssp GGGEEEEEESSSCCCEEEECSSHHHHHHHHHHHHHHHC---
T ss_pred ccceEEEEECCCCceEEEEeCCHHHHHHHHHHHHHHHHhhh
Confidence 46789988876 6999999999999999999999876543
No 76
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=97.34 E-value=0.00045 Score=77.04 Aligned_cols=94 Identities=21% Similarity=0.189 Sum_probs=66.8
Q ss_pred cceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCc
Q 003839 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (792)
Q Consensus 93 ~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p 172 (792)
-+.+|.|.+... ++++.|||.|=+.+|.|-|.....+ ...
T Consensus 244 li~~g~l~~~~~--~~~~~r~~fLF~d~Ll~~k~~~~~~--------------------------------------y~~ 283 (434)
T 3mpx_A 244 FLKEGTLMKVTG--KNRRPRHLFLMNDVLLYTYPQKDGK--------------------------------------YRL 283 (434)
T ss_dssp EEECCEEEEEET--TEEEEEEEEEESSEEEEEEECTTSC--------------------------------------EEE
T ss_pred eEecceEEEEeC--CCceEEEEEEECCEEEEEEecCCCe--------------------------------------EEE
Confidence 467899988753 5689999999888999998643311 123
Q ss_pred ceEEEcCceEEEecCCC--CCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 003839 173 FGEVHLKVSSIRDSKSD--DKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (792)
Q Consensus 173 ~G~I~L~~ssi~~~~~d--~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~ 226 (792)
++.|.|....|.....+ ...|.|.++.++|.|+|.|.++++.||++|+.++...
T Consensus 284 k~~i~L~~l~v~~~~~~~~~~~f~i~~~~~~~~l~a~s~~ek~~W~~~i~~ai~e~ 339 (434)
T 3mpx_A 284 KNTLAVANMKVSRPVMEKVPYALKIETSESCLMLSASSCAERDEWYGCLSRALPED 339 (434)
T ss_dssp EEEEEC-----CCCCCTTSCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHC----
T ss_pred EEEEEcCCcEEEecCCCCCCeeEEEecCCeEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 57788877776543332 5778898889999999999999999999999998754
No 77
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.33 E-value=0.00096 Score=63.05 Aligned_cols=85 Identities=20% Similarity=0.278 Sum_probs=65.5
Q ss_pred CCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCcceEEEcCceEEEec
Q 003839 107 KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFGEVHLKVSSIRDS 186 (792)
Q Consensus 107 kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p~G~I~L~~ssi~~~ 186 (792)
++=+.|+|+|=+++|.|.+.... .....-+|.|.|..-.|...
T Consensus 42 ~~~~eR~l~LF~~~Ll~~s~~~~-------------------------------------~~~f~~kgklPL~g~~V~~~ 84 (132)
T 1v61_A 42 EEKEERYFLLFSSVLIMLSASPR-------------------------------------MSGFMYQGKIPIAGMVVNRL 84 (132)
T ss_dssp SCCCEEEEEECSSCEEEEECSSS-------------------------------------SSCCEEEEEECTTTCBCSTT
T ss_pred CcceEEEEEEcCCeEEEEEecCC-------------------------------------CceEEEEEEEecceeEEEec
Confidence 45578999999999999884221 01223568999988777643
Q ss_pred C---CCCCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 003839 187 K---SDDKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDMFPR 228 (792)
Q Consensus 187 ~---~d~~~F~I~t~~-k~~~L~A~s~~dr~~Wi~aL~~a~~~~~~ 228 (792)
. ...+.|.|.... +++.+.|.|.+|++.||++|+.+++..++
T Consensus 85 ed~~~~~~aFeI~g~~~~~i~v~~~s~eE~~~Wl~~L~~~i~~~~~ 130 (132)
T 1v61_A 85 DEIEGSDCMFEITGSTVERIVVHCNNNQDFQEWMEQLNRLTKSGPS 130 (132)
T ss_dssp CSSSSSCCCEEEECSSSCEEEECCCCSHHHHHHHHHHHHHHTTSCS
T ss_pred cccccCccEEEEecCCCceEEEEeCCHHHHHHHHHHHHHHHhhccc
Confidence 2 126789998876 89999999999999999999999998763
No 78
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=97.26 E-value=0.0036 Score=57.42 Aligned_cols=97 Identities=13% Similarity=0.083 Sum_probs=64.5
Q ss_pred cceEEEEEeecC-CCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCC
Q 003839 93 NGISGVLYKWVN-YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (792)
Q Consensus 93 ~~~~G~L~K~~n-~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (792)
.+.+|.|.|-.. ..+.=++++|.|=+.+|-|-+...... + ..+
T Consensus 8 lv~eG~l~el~~~~~k~~~~v~~FLfND~Ll~a~~~~~~~---------~---------------------------~~~ 51 (113)
T 1zc3_B 8 LVYNGDLVEYEADHMAQLQRVHGFLMNDCLLVATWLPQRR---------G---------------------------MYR 51 (113)
T ss_dssp EEEEEEEEEEETTTCCEEEEEEEEEESSEEEEEEEECCTT---------S---------------------------CEE
T ss_pred EEEeCcEEEEccccCCCCccEEEEecCCEEEEEEEeccCc---------c---------------------------cEE
Confidence 356899988742 223334577878666777777532210 0 011
Q ss_pred cceEEEcCceEEEe---cCCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 172 PFGEVHLKVSSIRD---SKSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 172 p~G~I~L~~ssi~~---~~~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
-..++.|..-.+.. ...-.+.|.|.++.+++.++|+|.+|+.+||.+|+.|+..
T Consensus 52 ~~~~~~L~~~~v~d~~d~~~~~n~f~i~~~~~s~~~~aes~~eK~~Wl~~~~~a~~~ 108 (113)
T 1zc3_B 52 YNALYPLDRLAVVNVKDNPPMKDMFKLLMFPESRIFQAENAKIKREWLEVLEETKRA 108 (113)
T ss_dssp EEEEEETTTCEEEEECCBTTBSSEEEEEETTEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcccCEEEECCCCcccceEEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 22456665444332 1223788999999999999999999999999999999854
No 79
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=97.25 E-value=0.0014 Score=61.41 Aligned_cols=96 Identities=17% Similarity=0.260 Sum_probs=69.1
Q ss_pred CCCcceEEEEEeecC--------CCCCceeeEEEE-eC-----CeEEEEeecCCCccccchhhcccccccccchhhhhhh
Q 003839 90 IVGNGISGVLYKWVN--------YGKGWRPRWFVL-QD-----GVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISK 155 (792)
Q Consensus 90 ~~~~~~~G~L~K~~n--------~~kgWk~RwFVL-~~-----g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~ 155 (792)
.+...++|.|.-+.. -...|+++|+|| +- -+|.||....
T Consensus 15 ~~e~~kEG~l~~~~~~~~~~~~~~~~~W~k~RLvL~k~g~G~~y~LEfy~PPk--------------------------- 67 (136)
T 1v5m_A 15 LVDIQREGALRFMVADDAASGPGGTAQWQKCRLLLRRAVAGERFRLEFFVPPK--------------------------- 67 (136)
T ss_dssp SCSCCEEEEEEEEECSCCCSSSCCSCCCEEEEEEEEECSSSCCEEEEEESSTT---------------------------
T ss_pred cceeeeeeeeeeecccccccccCcccchhheeeEEEEccCCCceEEEEecCCc---------------------------
Confidence 345688999966532 345799999999 32 2688886322
Q ss_pred cccccccccccccCCCcceEEEcCce-EEEec-----CCCCCcEEEEeCCe-EEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 156 RKHKKETTSQRLLNRKPFGEVHLKVS-SIRDS-----KSDDKRFSIFTGTK-RLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 156 ~~~~~~~~~~~~~~~~p~G~I~L~~s-si~~~-----~~d~~~F~I~t~~k-~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
-.+|+..|.+... .|+.. .+.++.|.|.+.++ .|.|.|.+..+++.|+..|+.+...
T Consensus 68 -------------ssKpK~~i~cs~I~EVR~tt~LEmPD~~nTFVlK~~n~~eyi~ea~d~~q~~sWla~Ir~C~~~ 131 (136)
T 1v5m_A 68 -------------ASRPKVSIPLSAIIEVRTTMPLEMPEKDNTFVLKVENGAEYILETIDSLQKHSWVADIQGCVDS 131 (136)
T ss_dssp -------------SSSCSSCEETTTCCBCCCCCCSSSCCCTTEECCBCTTSCBEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred -------------ccCCccccchhhhhhhhhccccccCCccceEEEEecCCcEEEEEcCCHHHHHHHHHHHHhhcCC
Confidence 2357777776533 23322 23478999998877 6999999999999999999988764
No 80
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=97.24 E-value=0.0018 Score=61.65 Aligned_cols=90 Identities=14% Similarity=0.096 Sum_probs=66.4
Q ss_pred CCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCcceEEEcCceEEEe
Q 003839 106 GKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKPFGEVHLKVSSIRD 185 (792)
Q Consensus 106 ~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p~G~I~L~~ssi~~ 185 (792)
.+|=+.|+|-|=+.+|.|-|.....+. ......++.+.|.+-.+..
T Consensus 30 ~kg~qqR~~FLFND~LL~TK~~~kkk~----------------------------------~~~Y~vr~~~~L~gm~V~~ 75 (140)
T 3qwm_A 30 KLGLHQREIFLFNDLLVVTKIFQKKKN----------------------------------SVTYSFRQSFSLYGMQVLL 75 (140)
T ss_dssp CTTTTEEEEEEESSCEEEEECCC---C----------------------------------CCCCCCEEEECCTTEEEEE
T ss_pred cccccceEEEEecchhhheeecccCCC----------------------------------CCceEEEEEeeecceEEEc
Confidence 467899999999999999874332110 0123456888888887766
Q ss_pred cCCC--CCcEEEEeCC------eEEEEEcCCHHHHHHHHHHHHHHHHhcccc
Q 003839 186 SKSD--DKRFSIFTGT------KRLHLRAETREDRFAWMEALQAVKDMFPRM 229 (792)
Q Consensus 186 ~~~d--~~~F~I~t~~------k~~~L~A~s~~dr~~Wi~aL~~a~~~~~~~ 229 (792)
.... ++.|.|.+.. +++.|.|.|..||..||++|+.+++...+|
T Consensus 76 ~e~e~~p~~~~l~s~~~G~~~k~~i~~~A~s~~ER~rwi~dL~esI~e~~em 127 (140)
T 3qwm_A 76 FENQYYPNGIRLTSSVPGADIKVLINFNAPNPQDRKKFTDDLRESIAEVQEM 127 (140)
T ss_dssp ECCSSCTTEEEEEECCTTSCCEEEEEEECSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCceEEEEEecCCCCcceEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
Confidence 5444 6778888742 569999999999999999999999875543
No 81
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}
Probab=97.21 E-value=0.0024 Score=70.89 Aligned_cols=112 Identities=18% Similarity=0.149 Sum_probs=77.2
Q ss_pred CcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCC
Q 003839 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (792)
Q Consensus 92 ~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (792)
.-+.+|.|.+... .+.|+.|+|.|=+++|.|-+.+... ..+... .+. ..+. ......
T Consensus 294 ~li~eG~l~~~~~-~~~~~~~~~fLF~d~Ll~~k~~~~k-~~~~~~----------------~~~--~~~~---~~~~~~ 350 (418)
T 3t06_A 294 KMIHEGPLTWRIS-KDKTLDLHVLLLEDLLVLLQKQDEK-LLLKCH----------------SKT--AVGS---SDSKQT 350 (418)
T ss_dssp CEEEEEEEEECCB-TTBCCEEEEEEESSEEEEEEECSSC-EECCC----------------------------------C
T ss_pred eeEEeceEEEEeC-CCCeEEEEEEecCCEEEEEEEcCCc-eEEeec----------------ccc--cccC---CCcccc
Confidence 4578999987654 3458999999988899998865431 110000 000 0000 001123
Q ss_pred cceEEEcCceEEEecCCCCCcEEEEeC-----CeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 003839 172 PFGEVHLKVSSIRDSKSDDKRFSIFTG-----TKRLHLRAETREDRFAWMEALQAVKDMF 226 (792)
Q Consensus 172 p~G~I~L~~ssi~~~~~d~~~F~I~t~-----~k~~~L~A~s~~dr~~Wi~aL~~a~~~~ 226 (792)
-++.|.|....|+....+.+.|.|.+. .++|.|+|.|.++++.||++|+.|+.-.
T Consensus 351 ~k~~i~l~~~~v~~~~~~~~~f~l~~~~~~~~~~~~~l~A~s~~ek~~W~~~I~~a~~~~ 410 (418)
T 3t06_A 351 FSPVLKLNAVLIRSVATDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRNA 410 (418)
T ss_dssp CCSEEEGGGEEEEECSSCSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHTC
T ss_pred cCCceechhceeccccccCceEEEEecCCCCCceEEEEEcCCHHHHHHHHHHHHHHHhcC
Confidence 457899999988877778889998763 2799999999999999999999998764
No 82
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}
Probab=97.13 E-value=0.0012 Score=66.98 Aligned_cols=94 Identities=18% Similarity=0.279 Sum_probs=67.5
Q ss_pred CcceEEEEEeecCCCCCceeeEEEEeC------C-eEEEEeecCCCccccchhhcccccccccchhhhhhhccccccccc
Q 003839 92 GNGISGVLYKWVNYGKGWRPRWFVLQD------G-VLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTS 164 (792)
Q Consensus 92 ~~~~~G~L~K~~n~~kgWk~RwFVL~~------g-~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~ 164 (792)
...+||+...+- +|.||+||+||+. . .|.-||++.+
T Consensus 8 ~~v~eg~vk~r~--~KkWk~rw~vlrk~s~~adcl~L~vYkd~~d----------------------------------- 50 (224)
T 3ml4_A 8 AALVEGQVKLRD--GKKWKSRWLVLRKPSPVADCLLMLVYKDKCE----------------------------------- 50 (224)
T ss_dssp CCSEEEEEEEC-----CCEEEEEEEECSSTTSSCEEEEEESSSHH-----------------------------------
T ss_pred ceeEEEeeeeec--CCceeeEEEEEEcCCCchheEEEEEEcChhh-----------------------------------
Confidence 357899997763 4689999999943 2 5778886543
Q ss_pred ccccCCCcceEEEcCceEEEec----CCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHH
Q 003839 165 QRLLNRKPFGEVHLKVSSIRDS----KSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVK 223 (792)
Q Consensus 165 ~~~~~~~p~G~I~L~~ssi~~~----~~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~ 223 (792)
..++.+++.+|.|....=-++ +...+.+.|++.+.++.|-.++++.+.+|-..|+...
T Consensus 51 -r~k~~~~KaslsL~~~~GlE~g~~ldk~s~TlAIIc~d~~~vLAFds~e~l~~W~~~l~~sl 112 (224)
T 3ml4_A 51 -RSKGLRERSSLTLEDICGLEPALPYEGLAHTLAIICLSQAVMLGFDSHEAMCAWDTRIRYAL 112 (224)
T ss_dssp -HHSCCCCSEEEEECCEEEEEEEEEETTEEEEEEEEESSCEEEEECSSHHHHHHHHHHHHHHT
T ss_pred -hhcCCcccceeehHHhcCccccccccCcccEEEEEecCcEEEEEeCCHHHHHHHHHHHhhcc
Confidence 134456788999886542221 2225667799999999999999999999999887743
No 83
>3p6a_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 2.50A {Homo sapiens} PDB: 3odo_A
Probab=97.11 E-value=0.0042 Score=67.83 Aligned_cols=112 Identities=15% Similarity=0.116 Sum_probs=75.4
Q ss_pred CcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCC
Q 003839 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (792)
Q Consensus 92 ~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (792)
.-+.+|.|...... +.++.|||.|=+++|.|.+.++. +.... ..+. ...+. ......
T Consensus 258 ~li~eG~l~~~~~~-~~~~~~~~fLF~d~Ll~~k~k~~-k~~~k--------~~~~----------~~~~~---~~~k~~ 314 (377)
T 3p6a_A 258 KLVHEGPLTWRVTK-DKAVEVHVLLLDDLLLLLQRQDE-RLLLK--------SHSR----------TLTPT---PDGKTM 314 (377)
T ss_dssp CEEEEEEEEEESSS-SCEEEEEEEEESSEEEEEEEETT-EEECC--------CCCC----------C------------C
T ss_pred eEEEECCcEEEecC-CCeEEEEEEeeCCEEEEEEEcCc-eeEEe--------eccc----------ccccC---ccccCC
Confidence 46789999776543 37999999998889999886543 11110 0000 00000 000111
Q ss_pred cceEEEcCceEEEecCCCCCcEEEEeC----CeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 003839 172 PFGEVHLKVSSIRDSKSDDKRFSIFTG----TKRLHLRAETREDRFAWMEALQAVKDMF 226 (792)
Q Consensus 172 p~G~I~L~~ssi~~~~~d~~~F~I~t~----~k~~~L~A~s~~dr~~Wi~aL~~a~~~~ 226 (792)
..+.|.|....+++...+.+.|.++.. ...|.|.|.|.++++.||++|+.|++.+
T Consensus 315 ~~~~i~l~~~~v~e~~~~~~~~~~i~~~~~~~~~~~l~A~s~~ek~~W~~~I~~ai~~~ 373 (377)
T 3p6a_A 315 LRPVLRLTSAMTREVATDHKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGSL 373 (377)
T ss_dssp SCSEEEGGGEEEEECTTCTTEEEEEETTCTTCCEEEEECSSHHHHHHHHHHHHHHHHTC
T ss_pred CCCeEechhhhccccccccceeEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 245789998888887777777775553 4689999999999999999999999875
No 84
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=97.08 E-value=0.0026 Score=70.40 Aligned_cols=97 Identities=24% Similarity=0.244 Sum_probs=72.3
Q ss_pred CcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCC
Q 003839 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (792)
Q Consensus 92 ~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (792)
...++|.|.++....+.++.|++.|=+.+|-|-|.++. + ..
T Consensus 233 rli~~G~l~~~~~~~~~~~~~~~fLF~d~Ll~~k~k~~-~--------------------------------------y~ 273 (406)
T 2vrw_B 233 RPKIDGELKITSVERRSKTDRYAFLLDKALLICKRRGD-S--------------------------------------YD 273 (406)
T ss_dssp SEEEEEEEEEECSSCCSCEEEEEEEESSEEEEEEEETT-E--------------------------------------EE
T ss_pred cccccccEEEEecCCCccceEEEEecCCEEEEEEecCC-c--------------------------------------eE
Confidence 35789999988655567899999998888888886432 1 11
Q ss_pred cceEEEcCceEEEecCCC-------CCcEEEEe--CCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 003839 172 PFGEVHLKVSSIRDSKSD-------DKRFSIFT--GTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (792)
Q Consensus 172 p~G~I~L~~ssi~~~~~d-------~~~F~I~t--~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~~ 227 (792)
.++.|.|....|...... ...|.|.. +.+.|.|.|.|.++++.||++|+.|+....
T Consensus 274 ~k~~i~l~~~~v~~~~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~~ 338 (406)
T 2vrw_B 274 LKASVNLHSFQVRDDSSGERDNKKWSHMFLLIEDQGAQGYELFFKTRELKKKWMEQFEMAISNIY 338 (406)
T ss_dssp EEEEEETTTEEEEC--------CTTCEEEEEEETTCSCEEEEEESSHHHHHHHHHHHHHHHHHHS
T ss_pred EEEEecccceeeeecCCCCccCCccceeeEEEecCCCceEEEeCCCHHHHHHHHHHHHHHHhhhh
Confidence 357788877776644322 36788876 467899999999999999999999987643
No 85
>1xcg_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; X-RAY crystallography, regulation of RHOA GTPase, protein complex; 2.50A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 3kz1_A*
Probab=97.05 E-value=0.0053 Score=66.86 Aligned_cols=111 Identities=19% Similarity=0.161 Sum_probs=74.6
Q ss_pred CcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCC
Q 003839 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (792)
Q Consensus 92 ~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (792)
.-+.+|.|.+... .+.++.|+|.|=+++|.|-+..+. +..+... ++...+++ .....
T Consensus 252 ~li~~G~l~~~~~-~~~~~~~~~fLF~d~Ll~~k~~~~-k~~~~~~----------------~~~~~~~~-----~~~~~ 308 (368)
T 1xcg_A 252 KMIHEGPLTWRIS-KDKTLDLHVLLLEDLLVLLQKQDE-KLLLKCH----------------SKTAVGSS-----DSKQT 308 (368)
T ss_dssp CEEEEEEEEECCS-SSCCCEEEEEEESSEEEEEEECSS-CEECCC----------------------------------C
T ss_pred eEEeecceEeeec-CCCeeEEEEEcccccHHHhhcccc-cceeeec----------------cccccCCC-----CcccC
Confidence 4578999986432 356899999998889999886543 1111000 00000000 01123
Q ss_pred cceEEEcCceEEEecCCCCCcEEEEeC-----CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 172 PFGEVHLKVSSIRDSKSDDKRFSIFTG-----TKRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 172 p~G~I~L~~ssi~~~~~d~~~F~I~t~-----~k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
-++.|.|....|.....+.+.|.|.+. .++|.|+|.|.++++.||++|+.|+..
T Consensus 309 ~~~~i~l~~~~v~~~~~~~~~f~i~~~~~~g~~~~~~l~a~s~~ek~~W~~~i~~ai~~ 367 (368)
T 1xcg_A 309 FSPVLKLNAVLIRSVATDKRAFFIICTSKLGPPQIYELVALTSSDKNTWMELLEEAVRN 367 (368)
T ss_dssp CCSEEEGGGEEEEECSSCSSEEEEEECCSSSTTCEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred cCCceEccceeeecccCCCceEEEEEecCCCCceEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 468899988888776667788987763 478999999999999999999999864
No 86
>2dfk_A Collybistin II; DH domain, PH domain, cell cycle; 2.15A {Rattus norvegicus} SCOP: a.87.1.1 b.55.1.1
Probab=97.04 E-value=0.0034 Score=69.54 Aligned_cols=101 Identities=14% Similarity=0.113 Sum_probs=74.0
Q ss_pred CcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCC
Q 003839 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (792)
Q Consensus 92 ~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (792)
.-+.+|.|.+.....+.++.|+|.|=+.+|.|-|...... ....
T Consensus 256 ~Li~~G~l~~~~~~~~k~~~r~~fLF~d~Ll~~k~~~~~~------------------------------------~~~~ 299 (402)
T 2dfk_A 256 ELIYTGEMAWIYQPYGRNQQRVFFLFDHQMVLCKKDLIRR------------------------------------DILY 299 (402)
T ss_dssp CEEEEEEEEEESSTTCCCEEEEEEEETTEEEEEEECSSCT------------------------------------TCEE
T ss_pred ceEEeceEEEEeccCCceEEEEEEeeCCEEEEEEeccccC------------------------------------CceE
Confidence 4578999998765344589999999888999888532100 0112
Q ss_pred cceEEEcCceEEEecCCC---------CCcEEEEeC--CeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 003839 172 PFGEVHLKVSSIRDSKSD---------DKRFSIFTG--TKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (792)
Q Consensus 172 p~G~I~L~~ssi~~~~~d---------~~~F~I~t~--~k~~~L~A~s~~dr~~Wi~aL~~a~~~~~~ 228 (792)
-++.|.|....|....+. .+.|.|... .+.|.|+|.|.++++.||++|+.++....+
T Consensus 300 ~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~eK~~Wi~~i~~a~~~~~~ 367 (402)
T 2dfk_A 300 YKGRIDMDKYEVIDIEDGRDDDFNVSMKNAFKLHNKETEEVHLFFAKKLEEKIRWLRAFREERKMVQE 367 (402)
T ss_dssp EEEEEEGGGEEEEECCSEECSSSCCEESSEEEEEESSSSCEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred EeeeeeccceEEEecCCCCccccccccceeEEEEECCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHHh
Confidence 357888887777653321 257888775 468999999999999999999999887554
No 87
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Probab=97.01 E-value=0.0037 Score=70.47 Aligned_cols=101 Identities=18% Similarity=0.166 Sum_probs=74.3
Q ss_pred CcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCC
Q 003839 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (792)
Q Consensus 92 ~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (792)
.-+++|.|.+.....+.++.|+|.|=+.+|.|-|...... ....
T Consensus 333 ~li~~G~l~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~------------------------------------~~~~ 376 (466)
T 2pz1_A 333 ELIYSGELTRVTQPQAKSQQRMFFLFDHQLIYCKKDLLRR------------------------------------DVLY 376 (466)
T ss_dssp CEEEEEEEEEECTTTCCEEEEEEEEETTEEEEEEECSSCT------------------------------------TCEE
T ss_pred eeEEeeeEEEEecCCCCeeEEEEEEECCEEEEEEeccccC------------------------------------CceE
Confidence 4578999998765445689999999888999988542100 0112
Q ss_pred cceEEEcCceEEEecCCC---------CCcEEEEeC--CeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 003839 172 PFGEVHLKVSSIRDSKSD---------DKRFSIFTG--TKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (792)
Q Consensus 172 p~G~I~L~~ssi~~~~~d---------~~~F~I~t~--~k~~~L~A~s~~dr~~Wi~aL~~a~~~~~~ 228 (792)
.++.|.|....|...... .+.|.|... .+.|.|+|.|.++++.||++|+.++.....
T Consensus 377 ~k~~i~l~~~~v~~~~d~~~~~~~~~~~~~F~i~~~~~~~~~~l~a~s~~eK~~W~~~i~~a~~~~~~ 444 (466)
T 2pz1_A 377 YKGRLDMDGLEVVDLEDGKDRDLHVSIKNAFRLHRGATGDSHLLCTRKPEQKQRWLKAFAREREQVQL 444 (466)
T ss_dssp EEEEEETTTCEEEECCSBSCCSSCCCBCEEEEEECSSSCCEEEEEESSHHHHHHHHHHHHHHHHHHHT
T ss_pred EeeeeeccceEEEeCCCCcccccccccceeEEEEeCCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHHh
Confidence 457888888777654322 256888765 468999999999999999999999987554
No 88
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=96.91 E-value=0.0033 Score=73.22 Aligned_cols=96 Identities=23% Similarity=0.205 Sum_probs=73.9
Q ss_pred cceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCc
Q 003839 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (792)
Q Consensus 93 ~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p 172 (792)
..++|.|.++....+.++.|+|.|=+.+|.|-|..+. + ...
T Consensus 406 ll~~G~l~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~-~--------------------------------------y~~ 446 (587)
T 3ky9_A 406 PKIDGELKITSVERRSKMDRYAFLLDKALLICKRRGD-S--------------------------------------YDL 446 (587)
T ss_dssp EEEEEEEEEECSSCCSCEEEEEEEETTEEEEEEEETT-E--------------------------------------EEE
T ss_pred eEEEeeEEEEeccCCCcceEEEEEECCEEEEEEecCC-E--------------------------------------EEe
Confidence 5789999998777788999999999999999886532 1 124
Q ss_pred ceEEEcCceEEEecCCC-------CCcEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 003839 173 FGEVHLKVSSIRDSKSD-------DKRFSIFTGT--KRLHLRAETREDRFAWMEALQAVKDMFP 227 (792)
Q Consensus 173 ~G~I~L~~ssi~~~~~d-------~~~F~I~t~~--k~~~L~A~s~~dr~~Wi~aL~~a~~~~~ 227 (792)
++.|.|....|...... .+.|.|.... ++|.|.|.|.++++.||++|+.|+..+.
T Consensus 447 k~~i~L~~~~v~~~~~~~~~~~~~~~~f~i~~~~~~~~~~L~A~S~eeK~~Wi~~I~~ai~~~~ 510 (587)
T 3ky9_A 447 KDFVNLHSFQVRDDSSGDRDNKKWSHMFLLIEDQGAQGYELFFKTRELKKKWMEQFEMAISNIY 510 (587)
T ss_dssp EEEEEGGGEEEEEC-----CCCTTCEEEEEEETTC---CEEEESSHHHHHHHHHHHHHHHHHHS
T ss_pred eeeechhhceeeecCCCCcccccccceeEEEEcCCCceEEEEeCCHHHHHHHHHHHHHHhhhhc
Confidence 57888888877754322 3568888765 7899999999999999999999998654
No 89
>3odw_A RHO guanine nucleotide exchange factor 1; regulation of RHOA GTPase, rhogef, DH, PH, signaling PR; 3.20A {Homo sapiens} PDB: 3odx_A
Probab=96.89 E-value=0.0063 Score=70.15 Aligned_cols=114 Identities=15% Similarity=0.109 Sum_probs=75.9
Q ss_pred CCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCC
Q 003839 91 VGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (792)
Q Consensus 91 ~~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (792)
-.-+.+|.|.+.+.. +.++.|||.|=+++|.|.+.+.. +..+. ..+. ..... .....
T Consensus 410 R~LI~eG~l~~~~~~-~k~~~r~~fLF~D~LL~~k~k~~-ky~~k--------~~~~----------~~~~~---~d~k~ 466 (536)
T 3odw_A 410 KKLVHEGPLTWRVTK-DKAVEVHVLLLDDLLLLLQRQDE-RLLLK--------SHSR----------TLTPT---PDGKT 466 (536)
T ss_dssp SCEEEEEEEEEESCC----CEEEEEEESSEEEEEEEETT-EEECC--------CC-------------------------
T ss_pred ceeeeecceEEEecC-CCeeEEEEEEcCCEEEEEEEcCC-eEEEe--------eccc----------ccccc---ccccc
Confidence 346889999877643 36899999998889999886543 11110 0000 00000 01111
Q ss_pred CcceEEEcCceEEEecCCCCCcEEEEe----CCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 003839 171 KPFGEVHLKVSSIRDSKSDDKRFSIFT----GTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (792)
Q Consensus 171 ~p~G~I~L~~ssi~~~~~d~~~F~I~t----~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~~ 227 (792)
...+.|.|....++....+.+.|.++. +.++|.|.|.|.+|++.||++|+.|++.+.
T Consensus 467 ~~~~~i~L~~l~v~e~~~d~~~ffli~~~~~~~~~~~L~A~S~eEK~~W~~~I~~aI~~~~ 527 (536)
T 3odw_A 467 MLRPVLRLTSAMTREVATDHKAFYVLFTWDQEAQIYELVAQTVSERKNWCALITETAGSLK 527 (536)
T ss_dssp CCCSEEEGGGEEEEECTTCTTEEEEEEC---CCCEEEEECSSHHHHHHHHHHHHHHHHTSC
T ss_pred ccCceeecccceeecccccCCceEEEecCCCCceEEEEECCCHHHHHHHHHHHHHHHHhCC
Confidence 234689999999988877888887655 347899999999999999999999998754
No 90
>1dbh_A Protein (human SOS 1); guanine nucleotide exchange factor, gene regulation; 2.30A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1pms_A 1awe_A
Probab=96.82 E-value=0.0053 Score=66.52 Aligned_cols=101 Identities=18% Similarity=0.251 Sum_probs=73.4
Q ss_pred CcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCC
Q 003839 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (792)
Q Consensus 92 ~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (792)
.-+.+|.|.+++ .++.|+|.|=+.+|-|-|...... ++.|. ......
T Consensus 246 ~li~eG~l~~~g----~~~~~~~fLF~d~Ll~~k~~~~~~-----------~~~~~------------------~~~~y~ 292 (354)
T 1dbh_A 246 EFIMEGTLTRVG----AKHERHIFLFDGLMICCKSNHGQP-----------RLPGA------------------SNAEYR 292 (354)
T ss_dssp CEEEEEEEEETT----CSSCEEEEEESSEEEEEEECTTCC-----------CCTTS------------------CCCSEE
T ss_pred eEEEEeeEEEEe----cCceEEEEEeCCEEEEEecCCCCC-----------CCCCC------------------CCccee
Confidence 357899999873 689999999888999988643200 00000 011223
Q ss_pred cceEEEcCceEEEecCCC---CCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 172 PFGEVHLKVSSIRDSKSD---DKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 172 p~G~I~L~~ssi~~~~~d---~~~F~I~t~~-k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
.++.|.|....|....+. .+.|.|.+.. +.|.|+|.|.+++..|+++|+.++..
T Consensus 293 ~k~~i~l~~~~v~~~~d~~~~~~~F~i~~~~~~~~~l~a~s~~ek~~W~~~i~~~~~~ 350 (354)
T 1dbh_A 293 LKEKFFMRKVQINDKDDTNEYKHAFEIILKDENSVIFSAKSAEEKNNWMAALISLQYR 350 (354)
T ss_dssp EEEEEESCSCEEEECCCSSSCCSEEEECCTTSCCEEEECSSHHHHHHHHHHHHHHHTT
T ss_pred EEEEEeccceEEEeCCcccccCccEEEecCCCCEEEEEeCCHHHHHHHHHHHHHHHhh
Confidence 568999998887764322 5789998875 88999999999999999999999764
No 91
>1kz7_A Guanine nucleotide exchange factor DBS; guanine nucleotide exchange factor (GEF), small G-protein, signaling protein; 2.40A {Mus musculus} SCOP: a.87.1.1 b.55.1.1 PDB: 1lb1_A 1kzg_A 1rj2_A
Probab=96.70 E-value=0.012 Score=63.95 Aligned_cols=105 Identities=19% Similarity=0.286 Sum_probs=73.0
Q ss_pred CcceEEEEEeecCCCC-----------CceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhccccc
Q 003839 92 GNGISGVLYKWVNYGK-----------GWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKK 160 (792)
Q Consensus 92 ~~~~~G~L~K~~n~~k-----------gWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~ 160 (792)
...++|.|.+|....+ .++.|+|.|=+.+|-|-|..... |.
T Consensus 209 ~ll~~g~l~~~~~~~~g~~~~k~~~~~k~~~r~~fLF~d~Ll~~k~~~~~---------------~~------------- 260 (353)
T 1kz7_A 209 KLLMQGSFSVWTDHKKGHTKVKELARFKPMQRHLFLHEKAVLFCKKREEN---------------GE------------- 260 (353)
T ss_dssp CEEEEEEEEEEECCCCC-----CCCSSSCEEEEEEEESSEEEEEEEECCC---------------CS-------------
T ss_pred hhheecceEEEecCccccchhhhhhccCcceeEEEEECCEEEEEEecccc---------------cc-------------
Confidence 4678999998753222 37899999988888888864320 00
Q ss_pred ccccccccCCCcceEEEcCceEEEecC-CCCCcEEEEeC--CeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 003839 161 ETTSQRLLNRKPFGEVHLKVSSIRDSK-SDDKRFSIFTG--TKRLHLRAETREDRFAWMEALQAVKDMF 226 (792)
Q Consensus 161 ~~~~~~~~~~~p~G~I~L~~ssi~~~~-~d~~~F~I~t~--~k~~~L~A~s~~dr~~Wi~aL~~a~~~~ 226 (792)
+. .......-++.|.|....|.... .+++.|.|... .+.|.|+|.|.++++.|+++|+.|+...
T Consensus 261 ~~--~~~~~y~~k~~i~l~~~~v~e~~~~~~~~F~i~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~ 327 (353)
T 1kz7_A 261 GY--EKAPSYSYKQSLNMTAVGITENVKGDTKKFEIWYNAREEVYIIQAPTPEIKAAWVNAIRKVLTSQ 327 (353)
T ss_dssp SC--CCSCEEEEEEEEEGGGEEEECCBTTBTTEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHHHH
T ss_pred CC--CCCCeEEEEEEeEcccceeeEcCCCCCceEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHHHH
Confidence 00 00001124577888877776543 35789999763 5789999999999999999999998753
No 92
>1txd_A RHO guanine nucleotide exchange factor 12; helical bundle (DH), beta sandwich (PH), signaling protein; 2.13A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 1x86_A
Probab=96.68 E-value=0.011 Score=64.99 Aligned_cols=114 Identities=15% Similarity=0.192 Sum_probs=73.1
Q ss_pred CcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCC
Q 003839 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (792)
Q Consensus 92 ~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (792)
.-+.+|.|.+... .+.++.|++.|=+.+|.|-+.+++ +..+... .+.+ .+. ......
T Consensus 256 ~li~eG~l~~~~~-~~~~~~~~~fLF~d~Ll~~k~~~~-~~~~~~~----~~~~--------------~~~---~~~~~~ 312 (385)
T 1txd_A 256 KMIHEGPLVWKVN-RDKTIDLYTLLLEDILVLLQKQDD-RLVLRCH----SKIL--------------AST---ADSKHT 312 (385)
T ss_dssp CEEEEEEEEEESS-SSCBCCEEEEEESSEEEEEEEETT-EEECCC----------------------------------C
T ss_pred eEEEECcEEEEcC-CCCeEEEEEEecCCeeEEEEecCC-eeEEeec----cccc--------------ccc---CCCCcC
Confidence 4578999986543 246899999998888888886543 1110000 0000 000 001123
Q ss_pred cceEEEcCceEEEecCCCCCcEEEEe----CCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 003839 172 PFGEVHLKVSSIRDSKSDDKRFSIFT----GTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (792)
Q Consensus 172 p~G~I~L~~ssi~~~~~d~~~F~I~t----~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~~~ 228 (792)
.++.|.|....|.....+.+.|.+++ +.++|.|+|.|.++++.||++|+.++..+..
T Consensus 313 ~~~~i~l~~~~v~~~~~d~~~~f~i~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~~~~~ 373 (385)
T 1txd_A 313 FSPVIKLSTVLVRQVATDNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKE 373 (385)
T ss_dssp CCSEEEGGGEEEEECCC-CCEEEEEEECSSCEEEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceecccccccccccCCceEEEEEEcCCCceEEEEEcCCHHHHHHHHHHHHHHHHhccC
Confidence 46889998888876655555555433 2478999999999999999999999987654
No 93
>1nty_A Triple functional domain protein; DBL, pleckstrin, GEF, RHO, GTPase, guanine-nucleotide releas factor, phosphorylation, signaling protein; 1.70A {Homo sapiens} SCOP: a.87.1.1 b.55.1.1 PDB: 2nz8_B 2kr9_A
Probab=96.29 E-value=0.024 Score=60.25 Aligned_cols=100 Identities=14% Similarity=0.215 Sum_probs=71.5
Q ss_pred CcceEEEEEeecC--CCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccC
Q 003839 92 GNGISGVLYKWVN--YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLN 169 (792)
Q Consensus 92 ~~~~~G~L~K~~n--~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~ 169 (792)
.....|-+..+.. ..+..+.|+|.|=+.+|-|-|...... + ...
T Consensus 202 ~li~~~~~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~-----------------------------~-----~~~ 247 (311)
T 1nty_A 202 ELILQESFQVWDPKTLIRKGRERHLFLFEMSLVFSKEVKDSS-----------------------------G-----RSK 247 (311)
T ss_dssp CEEEEEEEEEECSSSSSCCEEEEEEEEESSEEEEEEEEECTT-----------------------------C-----CEE
T ss_pred CceeeeeEEEEcCcccccccceeEEEeccCeEEEEEeeccCC-----------------------------C-----Cce
Confidence 3457788877732 345679999999888888887543200 0 001
Q ss_pred CCcceEEEcCceEEEec-CCCCCcEEEEeC-----CeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 170 RKPFGEVHLKVSSIRDS-KSDDKRFSIFTG-----TKRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 170 ~~p~G~I~L~~ssi~~~-~~d~~~F~I~t~-----~k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
...++.|.|....|... ..+++.|.|..+ ...|.|+|.|.++++.|+++|+.++..
T Consensus 248 y~~k~~i~l~~~~v~e~~~~~~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~~i~e 309 (311)
T 1nty_A 248 YLYKSKLFTSELGVTEHVEGDPCKFALWVGRTPTSDNKIVLKASSIENKQDWIKHIREVIQE 309 (311)
T ss_dssp EEEEEEEEGGGEEEECCCTTCTTEEEEEESSSCCTTTCEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred eEEeeeeeccceeeEEccCCCCceEEEEeCCCCCCCceEEEECCCHHHHHHHHHHHHHHHhh
Confidence 12457888888777654 345788999773 467999999999999999999999864
No 94
>2rgn_B RHOA/RAC/CDC42 exchange factor; heterotrimeric G-protein, small molecular weight G-protein, complex, protein-protein complex, rhogef, galphaq; HET: GDP; 3.50A {Homo sapiens}
Probab=95.84 E-value=0.057 Score=58.60 Aligned_cols=102 Identities=14% Similarity=0.161 Sum_probs=69.2
Q ss_pred cceEEEEEeecC-----CCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccc
Q 003839 93 NGISGVLYKWVN-----YGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRL 167 (792)
Q Consensus 93 ~~~~G~L~K~~n-----~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~ 167 (792)
....|-+..+.. ..+.++.|+|.|=+.+|.|-+...... -| + ..
T Consensus 207 Ll~~g~~~v~~~~~~~~~~~~~~~r~~fLF~d~Ll~~k~~~~~~-------------~~--------------~----~~ 255 (354)
T 2rgn_B 207 LLGQDTFWVTEPEAGGLLSSRGRERRVFLFEQIIIFSEALGGGV-------------RG--------------G----TQ 255 (354)
T ss_dssp EEEEEEEEEECC-------CCCCEEEEEEESSEEEEEEECC---------------------------------------
T ss_pred ccccceEEEEcCCcCccccCCCceEEEEEeCCcEEEEEeccCCC-------------CC--------------C----CC
Confidence 456677665522 124578999999888898888643200 00 0 00
Q ss_pred cCCCcceEEEcCceEEEecC-CCCCcEEEEe-----CCeEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 168 LNRKPFGEVHLKVSSIRDSK-SDDKRFSIFT-----GTKRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 168 ~~~~p~G~I~L~~ssi~~~~-~d~~~F~I~t-----~~k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
....-++.|.|....|.... .+++.|.|.. +...|.|+|.|.++++.||++|+.|+..
T Consensus 256 ~~y~~k~~i~l~~~~v~~~~~~~~~~F~i~~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~ 319 (354)
T 2rgn_B 256 PGYVYKNSIKVSCLGLEGNLQGDPCRFALTSRGPEGGIQRYVLQAADPAISQAWIKHVAQILES 319 (354)
T ss_dssp CCEEEEEEEEGGGEEEEESGGGCTTEEEEEEECSSSCEEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CceEEcceeeccceeeeeccCCCCceEEEEecCCCCCceEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 11124578888887776543 4578999876 2368999999999999999999999875
No 95
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=95.61 E-value=0.002 Score=73.05 Aligned_cols=108 Identities=20% Similarity=0.211 Sum_probs=0.0
Q ss_pred cceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCC-
Q 003839 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK- 171 (792)
Q Consensus 93 ~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~- 171 (792)
.+.+|.|.|. ++++.|||.|=+.+|.|.+......-. .|... .+ ... .....+
T Consensus 253 li~eG~l~~~----~~~~~~~~fLF~d~Ll~~k~~~~~~~~-----------~g~~~--~f-----~~~----~~~~~~v 306 (510)
T 3jzy_A 253 LLHSGKLYKT----KSNKELHGFLFNDFLLLTYMVKQFAVS-----------SGSEK--LF-----SSK----SNAQFKM 306 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEEeceEEEc----CCCcEEEEEcccceeEEeeeccccccc-----------CCccc--cc-----Ccc----cccceeE
Confidence 4577888764 568999999988888888743321000 00000 00 000 000011
Q ss_pred cceEEEcCceEEEec---CCCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 003839 172 PFGEVHLKVSSIRDS---KSDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMF 226 (792)
Q Consensus 172 p~G~I~L~~ssi~~~---~~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~ 226 (792)
-++.|.|....|... ....+.|.|.+..++|.|+|.|.+++..||++|+.|+..+
T Consensus 307 ~k~~i~l~~~~v~~~~d~~~~~~~F~i~~~~~~~~l~a~s~~ek~~W~~~i~~ai~~~ 364 (510)
T 3jzy_A 307 YKTPIFLNEVLVKLPTDPSSDEPVFHISHIDRVYTLRTDNINERTAWVQKIKAASEQY 364 (510)
T ss_dssp ----------------------------------------------------------
T ss_pred EcCceehhheEEeccCCCCccccceeeeccceeEEeccCCHHHHHHHHHHHHHHHHHH
Confidence 145666666655543 2347889999999999999999999999999999998764
No 96
>2z0q_A XPLN, RHO guanine nucleotide exchange factor 3; DH-PH domain, alternative splicing, cytoplasm, guanine- nucleotide releasing factor; 1.79A {Mus musculus} PDB: 3eo2_A
Probab=95.59 E-value=0.047 Score=58.82 Aligned_cols=93 Identities=15% Similarity=0.177 Sum_probs=62.8
Q ss_pred cceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCCc
Q 003839 93 NGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRKP 172 (792)
Q Consensus 93 ~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~p 172 (792)
-+.+|.|.+. +| +.|+|.|=+.+|-|-|...... + ..-..-
T Consensus 232 li~~G~l~~~----~~-~~~~~fLF~d~Ll~~k~~~~~~---------~-------------------------~~~~v~ 272 (346)
T 2z0q_A 232 LCCHGELKNN----RG-VKLHVFLFQEVLVITRAVTHNE---------Q-------------------------LCYQLY 272 (346)
T ss_dssp EEEEEEEEET----TS-CEEEEEEESSEEEEEEEEEETT---------E-------------------------EEEEES
T ss_pred EEEeceeEEC----CC-cEEEEEECCCcEEEEEEeccCC---------c-------------------------eeeeee
Confidence 3678999863 23 8899999888888888532100 0 000002
Q ss_pred ceEEEcCceEEEecCCC------------------CCcEEEEe----CCeEEEEEcCCHHHHHHHHHHHHHHHH
Q 003839 173 FGEVHLKVSSIRDSKSD------------------DKRFSIFT----GTKRLHLRAETREDRFAWMEALQAVKD 224 (792)
Q Consensus 173 ~G~I~L~~ssi~~~~~d------------------~~~F~I~t----~~k~~~L~A~s~~dr~~Wi~aL~~a~~ 224 (792)
++.|.|....|....+. .+.|.|.. +.++|.|+|.|.++++.||++|+.|++
T Consensus 273 k~~i~l~~l~v~~~~d~~~~~~~s~~g~~~~~~~~~~~F~i~~~~~~~~~~~~l~a~s~~ek~~W~~~i~~aie 346 (346)
T 2z0q_A 273 RQPIPVKDLTLEDLQDGEVRLGGSLRGAFSNNERVKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAKE 346 (346)
T ss_dssp SCCEEGGGCEEEECCTTTSCCCSCC--CCSHHHHTSSEEEEEECCGGGCEEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred cCCcchhhceeeecCCCccccCccccccccCCcccccceEEEEecCCCCceEEEEECCHHHHHHHHHHHHHhhC
Confidence 35667766666544321 45798874 357899999999999999999999863
No 97
>1foe_A T-lymphoma invasion and metastasis inducing protein 1; DBL homology domain, pleckstrin homology domain, GTPase, guanine nucleotide exchange factor; 2.80A {Mus musculus} SCOP: a.87.1.1 b.55.1.1
Probab=93.48 E-value=0.55 Score=51.07 Aligned_cols=58 Identities=14% Similarity=0.134 Sum_probs=44.3
Q ss_pred CCcceEEEcCceEEEecCCCC----CcEEEE--------eCCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 003839 170 RKPFGEVHLKVSSIRDSKSDD----KRFSIF--------TGTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (792)
Q Consensus 170 ~~p~G~I~L~~ssi~~~~~d~----~~F~I~--------t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~~ 227 (792)
..-++.|.|....|....+.+ ..|.|. .+.+.|.|+|.|.++++.||++|+.++....
T Consensus 300 y~~k~~i~l~~~~v~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~A~s~~eK~~W~~~i~~~i~~~~ 369 (377)
T 1foe_A 300 FRFRHMIPTEALQVRALPSADAEANAVCEIVHVKSESEGRPERVFHLCCSSPESRKDFLKSVHSILRDKH 369 (377)
T ss_dssp CCCEEEEEGGGEEEECCCCTTTTSCCEEEEEECCBTGGGBCCEEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred eeEeeeccccceEEEecCCCccchhhHHHHHhccccccCCCcceEEEEeCCHHHHHHHHHHHHHHhhHHh
Confidence 346789999888887644322 347776 2357899999999999999999999987644
No 98
>3ksy_A SOS-1, SON of sevenless homolog 1; RAS, RAS activator, disease mutation, guanine-nucleotide releasing factor, signaling protein; 3.18A {Homo sapiens} PDB: 1xd4_A 1xdv_A 1q9c_A
Probab=93.27 E-value=0.2 Score=62.13 Aligned_cols=100 Identities=18% Similarity=0.264 Sum_probs=70.3
Q ss_pred CcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCCC
Q 003839 92 GNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNRK 171 (792)
Q Consensus 92 ~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (792)
.-+++|.|.|.+ ++ +.|+|.|=+++|-|-|.....+ ++.|. ......
T Consensus 443 ~Li~eG~l~~~~---~k-~~r~~FLF~D~Ll~~K~~~~~~-----------~~~g~------------------~~~~y~ 489 (1049)
T 3ksy_A 443 EFIMEGTLTRVG---AK-HERHIFLFDGLMICCKSNHGQP-----------RLPGA------------------SNAEYR 489 (1049)
T ss_dssp CCCCEEEEEETT---CS-SCEEEEEETTEEEEEECCTTCC-----------CCTTS------------------CCCSCC
T ss_pred eEEEeceEEEEc---cC-ceEEEEeeCCeEEEEEecCccC-----------CCCCC------------------CCCceE
Confidence 457899999876 33 8999999889999988643210 01110 011234
Q ss_pred cceEEEcCceEEEecCCC---CCcEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHHH
Q 003839 172 PFGEVHLKVSSIRDSKSD---DKRFSIFTGT-KRLHLRAETREDRFAWMEALQAVKD 224 (792)
Q Consensus 172 p~G~I~L~~ssi~~~~~d---~~~F~I~t~~-k~~~L~A~s~~dr~~Wi~aL~~a~~ 224 (792)
.++.|.|....|...... .+.|.|.... ..|.|+|.|.++++.||++|+.++.
T Consensus 490 ~k~~i~L~~l~V~~~~d~~~~~~~F~I~~~~~~~~~L~A~S~eeK~~Wi~~I~~~q~ 546 (1049)
T 3ksy_A 490 LKEKFFMRKVQINDKDDTNEYKHAFEIILKDENSVIFSAKSAEEKNNWMAALISLQY 546 (1049)
T ss_dssp CCCEECCSSCCCCCCCCSSSCCSEEEECCTTSCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCceEEEECCCCccccceEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 578888887776544332 4678887765 5899999999999999999998865
No 99
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=91.69 E-value=1 Score=53.22 Aligned_cols=95 Identities=16% Similarity=0.248 Sum_probs=58.3
Q ss_pred CcceEEEEEeecCCC-CCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCC
Q 003839 92 GNGISGVLYKWVNYG-KGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (792)
Q Consensus 92 ~~~~~G~L~K~~n~~-kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (792)
..++.|++.|.++.+ ..||+|+|.|..+.|...-....
T Consensus 558 ~~i~~G~~~k~~g~f~~~~~rR~~~l~p~r~e~~~e~~~----------------------------------------- 596 (689)
T 3v5w_A 558 DCIMHGYMSKMGNPFLTQWQRRYFYLFPNRLEWRGEGEA----------------------------------------- 596 (689)
T ss_dssp CCCEEEEEEEC-------CEEEEEEEETTEEEEECTTSC-----------------------------------------
T ss_pred cceeecccccCCCcccchhhhhccccCCCcccccccCCC-----------------------------------------
Confidence 467899999997654 58999999998888877642110
Q ss_pred CcceEEEcCceE-EEe-cCCCCCcEEEEe-CCeEEEEEcCCHHHHHHHHHHHHHHHHhccc
Q 003839 171 KPFGEVHLKVSS-IRD-SKSDDKRFSIFT-GTKRLHLRAETREDRFAWMEALQAVKDMFPR 228 (792)
Q Consensus 171 ~p~G~I~L~~ss-i~~-~~~d~~~F~I~t-~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~~~ 228 (792)
|...+.+.... |.. ...-...|.+.. ..|+|.+.+.|..++..|..+|+.+-....+
T Consensus 597 -~~~l~~~~~v~~v~k~~i~~~~~l~~~~k~~k~f~~~t~~~~~~~~W~~~i~~~~~~~~~ 656 (689)
T 3v5w_A 597 -PQSLLTMEEIQSVEETQIKERKCLLLKIRGGKQFILQCDSDPELVQWKKELRDAYREAQQ 656 (689)
T ss_dssp -CCEEEEGGGEEEEEEEESSSCEEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred -CcceeeeccccccccCcCCCCcceeeeecCCcEEEEECCChHHHHHHHHHHHHHHHHHHH
Confidence 11222222211 100 011134455554 4689999999999999999999987654444
No 100
>2rr3_B OSBP, oxysterol-binding protein 1; lipid transport, transport, protein-peptide complex, major S protein domain, protein binding; NMR {Homo sapiens}
Probab=91.21 E-value=0.093 Score=39.40 Aligned_cols=22 Identities=27% Similarity=0.598 Sum_probs=18.2
Q ss_pred CCCCCccccccccccccccccc
Q 003839 347 VEDETDEDENTFFDTRDFLSSS 368 (792)
Q Consensus 347 ~~~~~~~de~~f~d~~~~~~~~ 368 (792)
++.+++|||+|||||.+|++.+
T Consensus 10 Ge~SdEDed~EfFDA~efITv~ 31 (47)
T 2rr3_B 10 GDMSDEDDENEFFDAPEIITMP 31 (47)
T ss_dssp CCSCCCCCSSCCBCCCSSCSSC
T ss_pred ccccccccccccccccceeEcc
Confidence 5677788889999999988766
No 101
>1fho_A UNC-89; pleckstrin homology domain, electrostatics, muscle, signal transduction, signaling protein; NMR {Caenorhabditis elegans} SCOP: b.55.1.1
Probab=87.39 E-value=0.95 Score=41.71 Aligned_cols=102 Identities=13% Similarity=0.133 Sum_probs=71.2
Q ss_pred CCCCcceEEEEEeecCCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhccccccccccccc
Q 003839 89 DIVGNGISGVLYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLL 168 (792)
Q Consensus 89 ~~~~~~~~G~L~K~~n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~ 168 (792)
......+.|.+.-|....| =+.|+.-|=+..|-+-|..... ...
T Consensus 6 ~~G~Ll~q~~f~V~~~~~k-~~eR~vFLFe~~ilf~K~~~~~-----------------------------------~~~ 49 (119)
T 1fho_A 6 KLGRIIRHDAFQVWEGDEP-PKLRYVFLFRNKIMFTEQDAST-----------------------------------SPP 49 (119)
T ss_dssp CCCCSSEEEEEEECSTTCS-CEEEEEEEETTEEEEEEECCSS-----------------------------------SSC
T ss_pred HcCCccccCceEEEeCCCC-cceEEEEEecCcEEEEEEecCC-----------------------------------CCC
Confidence 3445688999999965433 4557777766677777754110 011
Q ss_pred CCCcceEEEcCceEEEecCC--CCCcEEEEeCC--eEEEE--EcCCHH-HHHHHHHHHHHHHHhc
Q 003839 169 NRKPFGEVHLKVSSIRDSKS--DDKRFSIFTGT--KRLHL--RAETRE-DRFAWMEALQAVKDMF 226 (792)
Q Consensus 169 ~~~p~G~I~L~~ssi~~~~~--d~~~F~I~t~~--k~~~L--~A~s~~-dr~~Wi~aL~~a~~~~ 226 (792)
...-+..|.|....+.++.. |+++|.|-.+. ..|.+ +|.|.+ .++.||+.|+..++.+
T Consensus 50 ~Y~~K~~ikl~~~~lte~~~~~d~~kFeiw~~~~~~~~il~~qA~s~e~~K~~Wv~~I~~~~~~~ 114 (119)
T 1fho_A 50 SYTHYSSIRLDKYNIRQHTTDEDTIVLQPQEPGLPSFRIKPKDFETSEYVRKAWLRDIAEEQEKY 114 (119)
T ss_dssp CCSSCCEEESSSCEEEEECTTCCEEEEECCSTTCCCBCCCCCSSSSCSHHHHHHHHHHHTCCHHH
T ss_pred cEEEeeEEeeceeEEEecCCCCCCcEEEEccCCCCceEEEeeecCCcHHHHHHHHHHHHHHHHHH
Confidence 22346788888888887755 56789997654 45778 999999 9999999999876654
No 102
>3zvr_A Dynamin-1; hydrolase, DRP1, DRP, endocytosis, mitochondrial fission, GT stalk, PH, BSE, membrane fission; HET: 1PE; 3.10A {Rattus norvegicus} PDB: 3snh_A
Probab=86.77 E-value=3.7 Score=49.22 Aligned_cols=90 Identities=24% Similarity=0.323 Sum_probs=58.2
Q ss_pred cceEEEEEeec--CCCCCceeeEEEEeCCeEEEEeecCCCccccchhhcccccccccchhhhhhhcccccccccccccCC
Q 003839 93 NGISGVLYKWV--NYGKGWRPRWFVLQDGVLSYYKIHGPDKIIVSEETERGCKVIGEESTRIISKRKHKKETTSQRLLNR 170 (792)
Q Consensus 93 ~~~~G~L~K~~--n~~kgWk~RwFVL~~g~L~YYk~~~~~~i~~~~~~~~~~~vig~~~~~~~~~~~~~~~~~~~~~~~~ 170 (792)
++..|||.... .+.+|=|.-||||.-..|++||+.....
T Consensus 540 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------- 580 (772)
T 3zvr_A 540 VIRKGWLTINNIGIMKGGSKEYWFVLTAENLSWYKDDEEKE--------------------------------------- 580 (772)
T ss_dssp EEEEEEEEESSSCCC---CCEEEEEEESSEEEEESSTTCCC---------------------------------------
T ss_pred ceeeeeeeecccccccCCCccceeeccccccccccchhhhc---------------------------------------
Confidence 78889999863 3345788899999999999999743310
Q ss_pred CcceEEEcCceEEEecC----CCCCcEEEEeCC--------eEEEEEcCCHHHHHHHHHHHHHH
Q 003839 171 KPFGEVHLKVSSIRDSK----SDDKRFSIFTGT--------KRLHLRAETREDRFAWMEALQAV 222 (792)
Q Consensus 171 ~p~G~I~L~~ssi~~~~----~d~~~F~I~t~~--------k~~~L~A~s~~dr~~Wi~aL~~a 222 (792)
-+-.+.|....++... +....|.|+.+. |++.|.|+|.++...|...+-.|
T Consensus 581 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 643 (772)
T 3zvr_A 581 -KKYMLSVDNLKLRDVEKGFMSSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFLRA 643 (772)
T ss_dssp -EEEEEECTTEEEEEC-------CEEEEEEETTSSCSBTTBSEEEEEESSHHHHHHHHHHHHHT
T ss_pred -ccccccccccccchhhhccccccccccccCCccccccchhhhhhhhccccccchhhHHhhhhc
Confidence 0123333333333221 124567777642 57899999999999999887443
No 103
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=84.69 E-value=2.2 Score=44.56 Aligned_cols=52 Identities=21% Similarity=0.331 Sum_probs=42.2
Q ss_pred ceEEEcCceEEEec--C--CCCCcEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHH
Q 003839 173 FGEVHLKVSSIRDS--K--SDDKRFSIFTGT--KRLHLRAETREDRFAWMEALQAVKD 224 (792)
Q Consensus 173 ~G~I~L~~ssi~~~--~--~d~~~F~I~t~~--k~~~L~A~s~~dr~~Wi~aL~~a~~ 224 (792)
.+.|.|+-|.+... . ..++.|.|.++. .++.|+|.|.++..+|+++|.+++.
T Consensus 205 ~~~ipL~m~~~tR~~~~~d~~~~~fev~s~dG~~t~~l~~~d~~~a~~W~~ai~~~i~ 262 (263)
T 1z87_A 205 AKHVSLKMAYVSRRCTPTDPEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQIG 262 (263)
T ss_dssp CEEEESSSEEEEEECCSSCSSSCEEEEEETTTTEEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred ccccCcceeeeeeeccccCCCCceEEEECCCCCeeEEEEECCHHHHHHHHHHHHHHhc
Confidence 47889999887532 1 246789999864 6799999999999999999999863
No 104
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=84.56 E-value=2.9 Score=50.46 Aligned_cols=36 Identities=28% Similarity=0.286 Sum_probs=29.9
Q ss_pred CCcEEEEeCC-----eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 190 DKRFSIFTGT-----KRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 190 ~~~F~I~t~~-----k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
++.|+|+.+. +.++|.|.|.++.+.|++.|+.....
T Consensus 103 ~r~fTIvyg~~~~nL~~l~LvA~s~e~A~~W~~gL~~L~~~ 143 (816)
T 3qr0_A 103 DKCVTICHGYNYIDLEWTHLVAENSSVAKKWSEEVFSYAYN 143 (816)
T ss_dssp HHEEEEEECSSSSSCEEEEEEESSHHHHHHHHHHHHHHHTC
T ss_pred ccEEEEEECCCcccceEEEEeeCCHHHHHHHHHHHHHHHHH
Confidence 6789988764 34599999999999999999987543
No 105
>2adz_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus} SCOP: b.55.1.1
Probab=84.52 E-value=1.8 Score=42.61 Aligned_cols=52 Identities=21% Similarity=0.338 Sum_probs=42.6
Q ss_pred ceEEEcCceEEEec----CCCCCcEEEEeCC--eEEEEEcCCHHHHHHHHHHHHHHHH
Q 003839 173 FGEVHLKVSSIRDS----KSDDKRFSIFTGT--KRLHLRAETREDRFAWMEALQAVKD 224 (792)
Q Consensus 173 ~G~I~L~~ssi~~~----~~d~~~F~I~t~~--k~~~L~A~s~~dr~~Wi~aL~~a~~ 224 (792)
...|.|+-|.|.-. +...+.|+|.+++ .+..|||.+..+.++|++||.+++.
T Consensus 120 ~~~IPLkMayvtR~~~~tD~e~r~fEv~s~DG~~t~iLrc~D~a~a~~Wf~aI~sni~ 177 (178)
T 2adz_A 120 AKHVSLKMAYVSRRCTPTDPEPRYLEICAADGQDAVFLRAKDEASARSWAGAIQAQIG 177 (178)
T ss_dssp CEEEETTTCEEEEECCSSCCSSCEEEEEETTTTEEEEECCSSHHHHHHHHHHHHHHHT
T ss_pred ceeecHHHHHHHHhccCCCCCccEEEEEcCCCCeeEEEEeCCHHHHHHHHHHHHHhcc
Confidence 47899999987532 2247789999975 5899999999999999999998763
No 106
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=75.73 E-value=9.6 Score=46.33 Aligned_cols=38 Identities=18% Similarity=0.283 Sum_probs=31.5
Q ss_pred CCCCcEEEEeCC-----eEEEEEcCCHHHHHHHHHHHHHHHHh
Q 003839 188 SDDKRFSIFTGT-----KRLHLRAETREDRFAWMEALQAVKDM 225 (792)
Q Consensus 188 ~d~~~F~I~t~~-----k~~~L~A~s~~dr~~Wi~aL~~a~~~ 225 (792)
..++.|+|+.+. +.++|.|.|.++.+.|++.|+.....
T Consensus 98 ~e~r~fTIvyg~d~~n~~~LdLVA~s~e~a~~W~~gL~~L~~~ 140 (885)
T 3ohm_B 98 LEEKLMTVVSGPDPVNTVFLNFMAVQDDTAKVWSEELFKLAMN 140 (885)
T ss_dssp -CTTEEEEEECSSGGGCEEEEEEESSSSHHHHHHHHHHHHHHC
T ss_pred ccccEEEEEECCCCccceEEEEEeCChHHHHHHHHHHHHHHhh
Confidence 347889988864 36999999999999999999987653
No 107
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=73.19 E-value=7.3 Score=46.89 Aligned_cols=37 Identities=16% Similarity=0.182 Sum_probs=31.3
Q ss_pred CCcEEEEeCC-----eEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 003839 190 DKRFSIFTGT-----KRLHLRAETREDRFAWMEALQAVKDMF 226 (792)
Q Consensus 190 ~~~F~I~t~~-----k~~~L~A~s~~dr~~Wi~aL~~a~~~~ 226 (792)
++.|+|+.+. ++++|.|.|.++++.|++.|+......
T Consensus 96 ~~~fTIvyg~~~~~l~~L~lvA~s~~ea~~Wv~GL~~L~~~~ 137 (799)
T 2zkm_X 96 LKTLTVVSGPDMVDLTFHNFVSYKENVGKAWAEDVLALVKHP 137 (799)
T ss_dssp GTEEEEEECSSSSSCEEEEEEESSSSHHHHHHHHHHHHHHCT
T ss_pred cceEEEEECCCccceeEEEEEeCCHHHHHHHHHHHHHHHHHH
Confidence 6789988764 369999999999999999999877653
No 108
>3hie_A Protein PSL1, exocyst complex component SEC3; PH domain, dimer, domain swapping, phosphate-binding, coiled coil, exocytosis; 2.00A {Saccharomyces cerevisiae}
Probab=45.14 E-value=1.1e+02 Score=29.89 Aligned_cols=39 Identities=10% Similarity=0.140 Sum_probs=32.5
Q ss_pred CCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 003839 188 SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (792)
Q Consensus 188 ~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~~ 227 (792)
..+..|.|.- +|+|+..|++.+||..+|..|-..-..+.
T Consensus 113 ~~~~gF~ltl-~K~Y~W~a~s~~Er~~FI~sL~K~y~ky~ 151 (171)
T 3hie_A 113 EISEGFILTM-SKKYYWETNSAKERTVFIKSLITLYIQTF 151 (171)
T ss_dssp SCTTEEEEES-SSEEEEECSSHHHHHHHHHHHHHHHHHTS
T ss_pred CCCCcEEEEe-CCeEEEecCCHHHHHHHHHHHHHHHHHHc
Confidence 3577898766 69999999999999999999977766554
No 109
>3ulb_A Target of rapamycin complex 2 subunit AVO1; PH domain, membrane localization, membrane protein; 1.90A {Saccharomyces cerevisiae} PDB: 3ulc_A
Probab=28.67 E-value=2e+02 Score=26.31 Aligned_cols=53 Identities=21% Similarity=0.327 Sum_probs=39.6
Q ss_pred eEEEcCce-EEEecCCCCCcEEEEe------CCeEEEEEcCCHHHHHHHHHHHHHHHHhc
Q 003839 174 GEVHLKVS-SIRDSKSDDKRFSIFT------GTKRLHLRAETREDRFAWMEALQAVKDMF 226 (792)
Q Consensus 174 G~I~L~~s-si~~~~~d~~~F~I~t------~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~ 226 (792)
-++|+..- -+..++..++.|.|+- ..|+|.|-|.|+++..+=|..|+..++.+
T Consensus 57 tS~H~s~Vv~~K~s~k~P~~FKivV~k~~~~e~KrYdfEA~s~~ea~EIV~~ik~~~~~Y 116 (121)
T 3ulb_A 57 KSLHISQVVLVKKSKRVPEHFKIFVRREGQDDIKRYYFEAVSGQECTEIVTRLQNLLSAY 116 (121)
T ss_dssp EEEEGGGEEEEEECSSCTTEEEEEECCTTCSSCEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeeEEEEEecccCCCcEEEEEEccCCCCcceeEEEeCCHHHHHHHHHHHHHHHHHh
Confidence 45666432 2445666677887543 24899999999999999999999988765
No 110
>3a58_A Exocyst complex component SEC3; protein complex, PH domain, GTPase, membrane traffic, coiled coil, exocytosis, phosphoprotein; HET: GNP; 2.60A {Saccharomyces cerevisiae}
Probab=26.62 E-value=2.3e+02 Score=29.92 Aligned_cols=39 Identities=10% Similarity=0.140 Sum_probs=31.9
Q ss_pred CCCCcEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHHhcc
Q 003839 188 SDDKRFSIFTGTKRLHLRAETREDRFAWMEALQAVKDMFP 227 (792)
Q Consensus 188 ~d~~~F~I~t~~k~~~L~A~s~~dr~~Wi~aL~~a~~~~~ 227 (792)
..+..|.|.- +|.|+..|.+.+||..+|..|-..-..+.
T Consensus 183 ~~~~gF~LTl-~K~YyW~A~s~kER~~FI~sLvKiy~KYt 221 (320)
T 3a58_A 183 EISEGFILTM-SKKYYWETNSAKERTVFIKSLITLYIQTF 221 (320)
T ss_dssp SCTTEEEEES-SSEEEEEESSHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCceEEEe-CCceEEecCCHHHHHHHHHHHHHHHHHHc
Confidence 3457788765 99999999999999999999977765543
No 111
>3sbu_A Hypothetical NTF2-like protein; cystatin-like, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; HET: MLY; 2.15A {Bacteroides fragilis}
Probab=26.06 E-value=47 Score=34.14 Aligned_cols=41 Identities=15% Similarity=0.246 Sum_probs=32.0
Q ss_pred eecceeeeeeccceee-EeecceE-EEEe-CCcceEEEEEeecC
Q 003839 574 SKVTSSIYNLILGKLY-CDHYGTM-RIEG-NREYSCKLKFKEQS 614 (792)
Q Consensus 574 ~~p~~~i~nii~G~~~-ie~~G~~-~I~~-~tg~~a~i~F~~k~ 614 (792)
.+|...|.||+.|+.| .+-..++ .|++ .+|+..++.|+..+
T Consensus 205 ~lP~~~i~NI~YGQky~~~s~~KIl~~rGi~NG~e~~l~Fkk~~ 248 (261)
T 3sbu_A 205 ALPADXLSNINYGQQNDDNASHKILALXGIGNGFSNILYFQRXD 248 (261)
T ss_dssp CCCSSEEEEEESSCCCCTTCSEEEEEEEESSSCCEEEEEEEEET
T ss_pred ccCcccceeeeccccccCCCCceEEEEEeecCceeEEEEEeecC
Confidence 3589999999999999 4555555 4456 79999999998653
No 112
>3e7k_A TRPM7 channel; coiled-coil, antiparallel, ION channel, assembly domain, Trp channel, membrane protein; 2.01A {Rattus norvegicus}
Probab=23.87 E-value=1.6e+02 Score=23.46 Aligned_cols=50 Identities=22% Similarity=0.278 Sum_probs=29.4
Q ss_pred hhhHHHHHHHHHHhHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHH
Q 003839 243 VSTEKLRQLLSEEGVREEVIQESEQIMRNEFAPLQSQLLLLKQKQWLLIDTLRQ 296 (792)
Q Consensus 243 ~s~~~lr~~l~~eg~~~~li~~~e~i~~~e~s~l~~~L~~lk~~~~~lld~L~~ 296 (792)
+..+++...........+ -+..|+..+..++.++-.++.-+..++++|+.
T Consensus 6 vT~eRve~m~~~l~Evne----kv~~ik~sL~~LD~~lg~Lqdlsal~v~tLk~ 55 (56)
T 3e7k_A 6 VTFERVEQMSIQIKEVGD----RVNYIKRSLQSLDSQIGHLQDLSALTVDTLKT 55 (56)
T ss_dssp HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 344555554433332222 23356666777787887778777778877754
Done!