Citrus Sinensis ID: 003840

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790--

MQQILLQRHAQQQQQHQQQHQQQQQQQQQPPQQPQQQQPQQQQQRRDGAHLLNGNTNGLLGNDSLMRQNPGTANAMATRMYEEKLKLPVLRDSLDDAAMKQRFGENMGQLLDPNHASYIKSAAATGQPSGQVLHGTAGGMSPQVQARSQQLPGSTPDIKSEINPVLNPRAAGPEGSLMGIPGSNQGGNNLTLKGWPLTGLEPLRSGLLQQQKPFIQAPQPFHQIQMLTPQHQQLLLAQQNLTSPSASDESRRFRMLLNNRSMSLGKDGLSNSVGDVVSNVGSPLPAGGHLLPRGDTDMLIKLKMAQMHQQQQQQQQQQQQNSNPQQHTLSNQQSQSSNHNLHQQDKMGPAGSVTLDGSMSNSFRGNDQVSKNQTGRKRKQPVSSSGPANSSGTANTAGPSPSSAPSTPSTHTPGDVISMPALPHSGTTSKPLMMFGTDGAGTLTSPSNQLWDDKDLELRADMDRLVEDGSLDDNVESFLSHDDTDPRDAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSEDSVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTMTLTAHEGLIAALAVSTETGYVASASHDKFVKLWK

cHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHcHHHHHHHHcccccccccccccccccHHHcccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHccccccccccccccccHHHHccccccccEEEccccccccCEECcccccccccccccccccccccccccccccccccccccccccccccCCcccccccccccccccccccccccccccHHHHccccHHHHHHHHHHccccccccccHHHHHHHHHccccccccccccccccccCECcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccCCcccCECccccCEEEECcccccEEEECcccccccEECccccccEEEECccccccccccccccccccccCEccccccccccccEEEEEECccccEEEECcccccEEcccccEEccccccEEcccccccCEEEEcccccccccccEEEEEcccccccEEccEEEcccccEEEEEEcccccEEEEEcccccEEEEEccccccEEEcccccccEEEEEEcccccEEEECcccccEEEcccccccccccccccccccEEEEEEcccccEEEEEccccccEEEEEccccCEEEEEEccEEEEEEcccccEEEEEEccccEEEEEccccccccccccccccEEEEEEcccccEEEECccccEEEEEccccccccEEEEEccccccEEEEEEcccccEEEEEEccccEEEEEcccccEEEEccccccEEEEEEcccccEEEEEEccccEEEcc

***************************************************************************MAT*MY*****************************************************************************KS**NPVL**********************NLTLKGWPLTGLEPLRSGLL*****FI**********MLTPQ**************************LN*RS*****DGLSNSVGDVVSNVGS*************TDMLIKLKMA***********************************************VTLDGSMSNSFRGNDQVSKNQTGRKRK*P*S*SGPANSSGTANTAGPSPSSAPSTPSTHTPGDVISMPALPHSGTTSKPLMMFGTDGAGTLTSPSNQLWDDKDLELRADMDRLVEDGSLDDNVESFLSHDDTDPRDAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSEDSVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTMTLTAHEGLIAALAVSTETGYVASASHDKFVKLWK

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MQQILxxxxxxxxxxxxxxxxxxxxxQQQPPQQPQQQQPQQQQQRRDGAHLLNGNTNGLLGNDSLMRQNPGTANAMATRMYEEKLKLPVLRDSLDDAAMKQRFGENMGQLLDPNHASYIKSAAATGQPSGQVLHGTAGGMSPQVQARSQQLPGSTPDIKSEINPVLNPRAAGPEGSLMGIPGSNQGGNNLTLKGWPLTGLEPLRSGLLQQQKPFIQAPQPFHQIQMLTPQHQQLLLAQQNLTSPSASDESRRFRMLLNNRSMSLGKDGLSNSVGDVVSNVGSPLPAGGHLLPRGDTDMLIKLKMAQMHQQQQQQQQQQQQNSNPQQHTLSNQQSQSSNHNLHQQDKMGPAGSVTLDGSMSNSFRGNDQVSKNQTGRKRKQPVSSSGPANSSGTANTAGPSPSSAPSTPSTHTPGDVISMPALPHSGTTSKPLMMFGTDGAGTLTSPSNQLWDDKDLELRADMDRLVEDGSLDDNVESFLSHDDTDPRDAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSEDSVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTMTLTAHEGLIAALAVSTETGYVASASHDKFVKLWK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Transcriptional corepressor LEUNIG	Transcription repressor subunit of the SEU-LUG transcriptional corepressor of the C class floral homeotic gene AGAMOUS during the early stages of floral meristem development. Is part of the A class cadastral complex that define the boundaries between the A and C class homeotic genes expression and function. Interacts together with APETALA2 and SEUSS to repress AGAMOUS expression. Also plays a role in ovule and pollen development.	probable	Q9FUY2

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 4AOW, chain A
Confidence level:very confident
Coverage over the Query: 500-792
View the alignment between query and template
View the model in PyMOL

Template: 4AOW, chain A
Confidence level:very confident
Coverage over the Query: 430-459,501-754
View the alignment between query and template
View the model in PyMOL

Template: 2YMU, chain A
Confidence level:very confident
Coverage over the Query: 430-792
View the alignment between query and template
View the model in PyMOL