BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003847
(791 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 147/316 (46%), Gaps = 64/316 (20%)
Query: 482 ILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFR-DFETQVRVIAKLVHPNLVRIRGFY 540
ILG G +YK L DGT +AV+R+ E F+T+V +I+ VH NL+R+RGF
Sbjct: 45 ILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFC 104
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK---KH 597
E+L++Y ++ NGS+A+ + S P L W R +IA G ARGLA+LH+ K
Sbjct: 105 MTPTERLLVYPYMANGSVASCLRERPESQPP-LDWPKRQRIALGSARGLAYLHDHCDPKI 163
Query: 598 VHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDL 657
+H ++K N+LL + E +GDFGL +L+ D + R
Sbjct: 164 IHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDXHVXXAVRG---------------- 205
Query: 658 XXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGK-------- 709
+ APE L + K + K DV+ +GV+LLEL+TG+
Sbjct: 206 -----------------TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL 248
Query: 710 -----VIVVDELGQGNGLLVEDKNXXXXXXXXXXXXXFEG--KEEALLSCFKLGYSCASP 762
V+++D + GLL E K +G K+E + ++ C
Sbjct: 249 ANDDDVMLLDWV---KGLLKEKK------LEALVDVDLQGNYKDEEVEQLIQVALLCTQS 299
Query: 763 LPQKRPSMKEALQALE 778
P +RP M E ++ LE
Sbjct: 300 SPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 147/316 (46%), Gaps = 64/316 (20%)
Query: 482 ILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFR-DFETQVRVIAKLVHPNLVRIRGFY 540
ILG G +YK L DG +AV+R+ E F+T+V +I+ VH NL+R+RGF
Sbjct: 37 ILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK---KH 597
E+L++Y ++ NGS+A+ + S P L W R +IA G ARGLA+LH+ K
Sbjct: 97 MTPTERLLVYPYMANGSVASCLRERPESQP-PLDWPKRQRIALGSARGLAYLHDHCDPKI 155
Query: 598 VHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDL 657
+H ++K N+LL + E +GDFGL +L+ D + R
Sbjct: 156 IHRDVKAANILLDEEFEAVVGDFGLAKLM--DYKDXHVXXAVRG---------------- 197
Query: 658 XXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGK-------- 709
+ APE L + K + K DV+ +GV+LLEL+TG+
Sbjct: 198 -----------------XIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL 240
Query: 710 -----VIVVDELGQGNGLLVEDKNXXXXXXXXXXXXXFEG--KEEALLSCFKLGYSCASP 762
V+++D + GLL E K +G K+E + ++ C
Sbjct: 241 ANDDDVMLLDWV---KGLLKEKK------LEALVDVDLQGNYKDEEVEQLIQVALLCTQS 291
Query: 763 LPQKRPSMKEALQALE 778
P +RP M E ++ LE
Sbjct: 292 SPMERPKMSEVVRMLE 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 143/308 (46%), Gaps = 46/308 (14%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGE----NSVDRFRDFETQVRVIAKLVHPNLVRIRG 538
+G G ++YK + + T +AV+++ + + + F+ +++V+AK H NLV + G
Sbjct: 39 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 539 FYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
F D+ ++Y ++PNGSL + G+ P L W R KIA+G A G+ FLHE H+
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP--LSWHMRCKIAQGAANGINFLHENHHI 155
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLX 658
H ++K N+LL KI DFGL R +S K + +TA
Sbjct: 156 HRDIKSANILLDEAFTAKISDFGLAR------ASEKFAQTVMXXRIVGTTA--------- 200
Query: 659 XXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQ 718
Y APE+LR + PK D+YSFGV+LLE++TG + VDE +
Sbjct: 201 -------------------YMAPEALRG-EITPKSDIYSFGVVLLEIITG-LPAVDEHRE 239
Query: 719 GNGLLVEDKNXXXXXXXX---XXXXXFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775
LL + + ++ + + + C KRP +K+ Q
Sbjct: 240 PQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299
Query: 776 ALEKIPSS 783
L+++ +S
Sbjct: 300 LLQEMTAS 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 143/308 (46%), Gaps = 46/308 (14%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGE----NSVDRFRDFETQVRVIAKLVHPNLVRIRG 538
+G G ++YK + + T +AV+++ + + + F+ +++V+AK H NLV + G
Sbjct: 39 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 539 FYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
F D+ ++Y ++PNGSL + G+ P L W R KIA+G A G+ FLHE H+
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP--LSWHMRCKIAQGAANGINFLHENHHI 155
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLX 658
H ++K N+LL KI DFGL R +S K + +TA
Sbjct: 156 HRDIKSANILLDEAFTAKISDFGLAR------ASEKFAQTVMXSRIVGTTA--------- 200
Query: 659 XXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQ 718
Y APE+LR + PK D+YSFGV+LLE++TG + VDE +
Sbjct: 201 -------------------YMAPEALRG-EITPKSDIYSFGVVLLEIITG-LPAVDEHRE 239
Query: 719 GNGLLVEDKNXXXXXXXXX---XXXXFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775
LL + + ++ + + + C KRP +K+ Q
Sbjct: 240 PQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299
Query: 776 ALEKIPSS 783
L+++ +S
Sbjct: 300 LLQEMTAS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 142/308 (46%), Gaps = 46/308 (14%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGE----NSVDRFRDFETQVRVIAKLVHPNLVRIRG 538
+G G ++YK + + T +AV+++ + + + F+ +++V+AK H NLV + G
Sbjct: 33 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 91
Query: 539 FYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
F D+ ++Y ++PNGSL + G+ P L W R KIA+G A G+ FLHE H+
Sbjct: 92 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP--LSWHMRCKIAQGAANGINFLHENHHI 149
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLX 658
H ++K N+LL KI DFGL R +S K +TA
Sbjct: 150 HRDIKSANILLDEAFTAKISDFGLAR------ASEKFAQXVMXXRIVGTTA--------- 194
Query: 659 XXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQ 718
Y APE+LR + PK D+YSFGV+LLE++TG + VDE +
Sbjct: 195 -------------------YMAPEALRG-EITPKSDIYSFGVVLLEIITG-LPAVDEHRE 233
Query: 719 GNGLLVEDKNXXXXXXXX---XXXXXFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775
LL + + ++ + + + C KRP +K+ Q
Sbjct: 234 PQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 293
Query: 776 ALEKIPSS 783
L+++ +S
Sbjct: 294 LLQEMTAS 301
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 139/307 (45%), Gaps = 46/307 (14%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGE----NSVDRFRDFETQVRVIAKLVHPNLVRIRGF 539
G G ++YK + + T +AV+++ + + + F+ +++V AK H NLV + GF
Sbjct: 31 GEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGF 89
Query: 540 YWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVH 599
D+ ++Y + PNGSL + G+ P L W R KIA+G A G+ FLHE H+H
Sbjct: 90 SSDGDDLCLVYVYXPNGSLLDRLSCLDGTPP--LSWHXRCKIAQGAANGINFLHENHHIH 147
Query: 600 GNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXX 659
++K N+LL KI DFGL R ++ +R G+
Sbjct: 148 RDIKSANILLDEAFTAKISDFGLAR---ASEKFAQXVXXSRIVGT--------------- 189
Query: 660 XXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQG 719
Y APE+LR + PK D+YSFGV+LLE++TG + VDE +
Sbjct: 190 ----------------TAYXAPEALRG-EITPKSDIYSFGVVLLEIITG-LPAVDEHREP 231
Query: 720 NGLLVEDKNXXXXXXXXX---XXXXFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776
LL + + ++ + + + C KRP +K+ Q
Sbjct: 232 QLLLDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQL 291
Query: 777 LEKIPSS 783
L++ +S
Sbjct: 292 LQEXTAS 298
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 127/304 (41%), Gaps = 43/304 (14%)
Query: 481 YILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFY 540
+++G +YK VL DG +A++R S +FET++ ++ HP+LV + GF
Sbjct: 45 FLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC 104
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMGSS--PCHLPWEARLKIAKGVARGLAFLHEKKHV 598
+E ++IY ++ NG+L Y GS + WE RL+I G ARGL +LH + +
Sbjct: 105 DERNEMILIYKYMENGNLKRHLY---GSDLPTMSMSWEQRLEICIGAARGLHYLHTRAII 161
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLX 658
H ++K N+LL + PKI DFG+ + T + G
Sbjct: 162 HRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLG--------------- 206
Query: 659 XXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQ 718
Y PE + K DVYSFGV+L E+L + +V L +
Sbjct: 207 -------------------YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR 247
Query: 719 GNGLL----VEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSCASPLPQKRPSMKEAL 774
L VE N + + E+L C + + RPSM + L
Sbjct: 248 EMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
Query: 775 QALE 778
LE
Sbjct: 308 WKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 130/304 (42%), Gaps = 43/304 (14%)
Query: 481 YILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFY 540
+++G +YK VL DG +A++R S +FET++ ++ HP+LV + GF
Sbjct: 45 FLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC 104
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMGSS--PCHLPWEARLKIAKGVARGLAFLHEKKHV 598
+E ++IY ++ NG+L Y GS + WE RL+I G ARGL +LH + +
Sbjct: 105 DERNEMILIYKYMENGNLKRHLY---GSDLPTMSMSWEQRLEICIGAARGLHYLHTRAII 161
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLX 658
H ++K N+LL + PKI DFG+ + ++ G + K +
Sbjct: 162 HRDVKSINILLDENFVPKITDFGISK------KGTELGQTHLXXVVKGTLG--------- 206
Query: 659 XXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQ 718
Y PE + K DVYSFGV+L E+L + +V L +
Sbjct: 207 -------------------YIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR 247
Query: 719 GNGLL----VEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSCASPLPQKRPSMKEAL 774
L VE N + + E+L C + + RPSM + L
Sbjct: 248 EMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
Query: 775 QALE 778
LE
Sbjct: 308 WKLE 311
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 43/213 (20%)
Query: 499 GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNG 556
G +AV+++ ++ + RDFE ++ ++ L H N+V+ +G + + +I +++P G
Sbjct: 40 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 99
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
SL + +K H+ L+ + +G+ +L K+++H NL RN+L+ N+ K
Sbjct: 100 SLRDY-LQKHKERIDHIKL---LQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVK 155
Query: 617 IGDFGLERLVTGDTSSSKAG--GSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXX 674
IGDFGL +++ D K G + F
Sbjct: 156 IGDFGLTKVLPQDKEYYKVKEPGESPIF-------------------------------- 183
Query: 675 XXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
++APESL K + DV+SFGV+L EL T
Sbjct: 184 ---WYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 43/213 (20%)
Query: 499 GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNG 556
G +AV+++ ++ + RDFE ++ ++ L H N+V+ +G + + +I +F+P G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYG 101
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
SL +K H+ L+ + +G+ +L K+++H +L RN+L+ N+ K
Sbjct: 102 SLREY-LQKHKERIDHIKL---LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 157
Query: 617 IGDFGLERLVTGDTSSSKAG--GSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXX 674
IGDFGL +++ D K G + F
Sbjct: 158 IGDFGLTKVLPQDKEXXKVKEPGESPIF-------------------------------- 185
Query: 675 XXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
++APESL K + DV+SFGV+L EL T
Sbjct: 186 ---WYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 43/213 (20%)
Query: 499 GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNG 556
G +AV+++ ++ + RDFE ++ ++ L H N+V+ +G + + +I +++P G
Sbjct: 70 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 129
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
SL + +K H+ L+ + +G+ +L K+++H +L RN+L+ N+ K
Sbjct: 130 SLRDY-LQKHKERIDHIKL---LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 185
Query: 617 IGDFGLERLVTGDTSSSKAG--GSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXX 674
IGDFGL +++ D K G + F
Sbjct: 186 IGDFGLTKVLPQDKEXXKVKEPGESPIF-------------------------------- 213
Query: 675 XXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
++APESL K + DV+SFGV+L EL T
Sbjct: 214 ---WYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 43/213 (20%)
Query: 499 GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNG 556
G +AV+++ ++ + RDFE ++ ++ L H N+V+ +G + + +I +++P G
Sbjct: 45 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 104
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
SL + +K H+ L+ + +G+ +L K+++H +L RN+L+ N+ K
Sbjct: 105 SLRDY-LQKHKERIDHIKL---LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 160
Query: 617 IGDFGLERLVTGDTSSSKAG--GSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXX 674
IGDFGL +++ D K G + F
Sbjct: 161 IGDFGLTKVLPQDKEXXKVKEPGESPIF-------------------------------- 188
Query: 675 XXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
++APESL K + DV+SFGV+L EL T
Sbjct: 189 ---WYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 43/213 (20%)
Query: 499 GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNG 556
G +AV+++ ++ + RDFE ++ ++ L H N+V+ +G + + +I +++P G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
SL + +K H+ L+ + +G+ +L K+++H +L RN+L+ N+ K
Sbjct: 102 SLRDY-LQKHKERIDHIKL---LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 157
Query: 617 IGDFGLERLVTGDTSSSKAG--GSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXX 674
IGDFGL +++ D K G + F
Sbjct: 158 IGDFGLTKVLPQDKEXXKVKEPGESPIF-------------------------------- 185
Query: 675 XXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
++APESL K + DV+SFGV+L EL T
Sbjct: 186 ---WYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 43/213 (20%)
Query: 499 GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNG 556
G +AV+++ ++ + RDFE ++ ++ L H N+V+ +G + + +I +++P G
Sbjct: 46 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 105
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
SL + +K H+ L+ + +G+ +L K+++H +L RN+L+ N+ K
Sbjct: 106 SLRDY-LQKHKERIDHIKL---LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 161
Query: 617 IGDFGLERLVTGDTSSSKAG--GSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXX 674
IGDFGL +++ D K G + F
Sbjct: 162 IGDFGLTKVLPQDKEXXKVKEPGESPIF-------------------------------- 189
Query: 675 XXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
++APESL K + DV+SFGV+L EL T
Sbjct: 190 ---WYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 43/213 (20%)
Query: 499 GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNG 556
G +AV+++ ++ + RDFE ++ ++ L H N+V+ +G + + +I +++P G
Sbjct: 44 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 103
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
SL + +K H+ L+ + +G+ +L K+++H +L RN+L+ N+ K
Sbjct: 104 SLRDY-LQKHKERIDHIKL---LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 159
Query: 617 IGDFGLERLVTGDTSSSKAG--GSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXX 674
IGDFGL +++ D K G + F
Sbjct: 160 IGDFGLTKVLPQDKEXXKVKEPGESPIF-------------------------------- 187
Query: 675 XXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
++APESL K + DV+SFGV+L EL T
Sbjct: 188 ---WYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 43/213 (20%)
Query: 499 GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNG 556
G +AV+++ ++ + RDFE ++ ++ L H N+V+ +G + + +I +++P G
Sbjct: 38 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 97
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
SL + +K H+ L+ + +G+ +L K+++H +L RN+L+ N+ K
Sbjct: 98 SLRDY-LQKHKERIDHIKL---LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 153
Query: 617 IGDFGLERLVTGDTSSSKAG--GSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXX 674
IGDFGL +++ D K G + F
Sbjct: 154 IGDFGLTKVLPQDKEXXKVKEPGESPIF-------------------------------- 181
Query: 675 XXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
++APESL K + DV+SFGV+L EL T
Sbjct: 182 ---WYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 43/213 (20%)
Query: 499 GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNG 556
G +AV+++ ++ + RDFE ++ ++ L H N+V+ +G + + +I +++P G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
SL + +K H+ L+ + +G+ +L K+++H +L RN+L+ N+ K
Sbjct: 99 SLRDY-LQKHKERIDHIKL---LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 154
Query: 617 IGDFGLERLVTGDTSSSKAG--GSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXX 674
IGDFGL +++ D K G + F
Sbjct: 155 IGDFGLTKVLPQDKEXXKVKEPGESPIF-------------------------------- 182
Query: 675 XXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
++APESL K + DV+SFGV+L EL T
Sbjct: 183 ---WYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 43/213 (20%)
Query: 499 GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNG 556
G +AV+++ ++ + RDFE ++ ++ L H N+V+ +G + + +I +++P G
Sbjct: 37 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 96
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
SL + +K H+ L+ + +G+ +L K+++H +L RN+L+ N+ K
Sbjct: 97 SLRDY-LQKHKERIDHIKL---LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 152
Query: 617 IGDFGLERLVTGDTSSSKAG--GSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXX 674
IGDFGL +++ D K G + F
Sbjct: 153 IGDFGLTKVLPQDKEXXKVKEPGESPIF-------------------------------- 180
Query: 675 XXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
++APESL K + DV+SFGV+L EL T
Sbjct: 181 ---WYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 43/213 (20%)
Query: 499 GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNG 556
G +AV+++ ++ + RDFE ++ ++ L H N+V+ +G + + +I +++P G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
SL + +K H+ L+ + +G+ +L K+++H +L RN+L+ N+ K
Sbjct: 99 SLRDY-LQKHKERIDHIKL---LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 154
Query: 617 IGDFGLERLVTGDTSSSKAG--GSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXX 674
IGDFGL +++ D K G + F
Sbjct: 155 IGDFGLTKVLPQDKEXXKVKEPGESPIF-------------------------------- 182
Query: 675 XXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
++APESL K + DV+SFGV+L EL T
Sbjct: 183 ---WYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 43/213 (20%)
Query: 499 GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNG 556
G +AV+++ ++ + RDFE ++ ++ L H N+V+ +G + + +I +++P G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
SL + +K H+ L+ + +G+ +L K+++H +L RN+L+ N+ K
Sbjct: 117 SLRDY-LQKHKERIDHIKL---LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 172
Query: 617 IGDFGLERLVTGDTSSSKAG--GSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXX 674
IGDFGL +++ D K G + F
Sbjct: 173 IGDFGLTKVLPQDKEXXKVKEPGESPIF-------------------------------- 200
Query: 675 XXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
++APESL K + DV+SFGV+L EL T
Sbjct: 201 ---WYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 43/213 (20%)
Query: 499 GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNG 556
G +AV+++ ++ + RDFE ++ ++ L H N+V+ +G + + +I +++P G
Sbjct: 43 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 102
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
SL + +K H+ L+ + +G+ +L K+++H +L RN+L+ N+ K
Sbjct: 103 SLRDY-LQKHKERIDHIKL---LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 158
Query: 617 IGDFGLERLVTGDTSSSKAG--GSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXX 674
IGDFGL +++ D K G + F
Sbjct: 159 IGDFGLTKVLPQDKEXXKVKEPGESPIF-------------------------------- 186
Query: 675 XXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
++APESL K + DV+SFGV+L EL T
Sbjct: 187 ---WYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 43/213 (20%)
Query: 499 GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNG 556
G +AV+++ ++ + RDFE ++ ++ L H N+V+ +G + + +I +++P G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
SL + +K H+ L+ + +G+ +L K+++H +L RN+L+ N+ K
Sbjct: 117 SLRDY-LQKHKERIDHIKL---LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 172
Query: 617 IGDFGLERLVTGDTSSSKAG--GSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXX 674
IGDFGL +++ D K G + F
Sbjct: 173 IGDFGLTKVLPQDKEXXKVKEPGESPIF-------------------------------- 200
Query: 675 XXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
++APESL K + DV+SFGV+L EL T
Sbjct: 201 ---WYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 39/211 (18%)
Query: 499 GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNG 556
G +AV+++ ++ + RDFE ++ ++ L H N+V+ +G + + +I +++P G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
SL + +K H+ L+ + +G+ +L K+++H +L RN+L+ N+ K
Sbjct: 99 SLRDY-LQKHKERIDHIKL---LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 154
Query: 617 IGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXX 676
IGDFGL +++ D + F + F
Sbjct: 155 IGDFGLTKVLPQD----------KEFFKVKEPGESPIF---------------------- 182
Query: 677 XYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
++APESL K + DV+SFGV+L EL T
Sbjct: 183 -WYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 138/333 (41%), Gaps = 93/333 (27%)
Query: 466 GDKELELE--TLLKASAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVR 523
G EL+ E TLLK LG+ ++ + +AV+ I E S+ +F + +
Sbjct: 1 GHMELKREEITLLKE----LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE-DEFFQEAQ 55
Query: 524 VIAKLVHPNLVRIRGFYWGVDEK----LIIYDFVPNGSLANA-RYRKMGSSPCHLPWEAR 578
+ KL HP LV+ ++GV K I+ +++ NG L N R G P L
Sbjct: 56 TMMKLSHPKLVK----FYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQL----- 106
Query: 579 LKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638
L++ V G+AFL + +H +L RN L+ D+ K+ DFG+ R V D S G
Sbjct: 107 LEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG-- 164
Query: 639 ARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSF 698
F K S APE K + K DV++F
Sbjct: 165 -TKFPVKWS--------------------------------APEVFHYFKYSSKSDVWAF 191
Query: 699 GVILLELLT-GKV--------IVVDELGQGNGL----LVEDKNXXXXXXXXXXXXXFEGK 745
G+++ E+ + GK+ VV ++ QG+ L L D
Sbjct: 192 GILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASD------------------- 232
Query: 746 EEALLSCFKLGYSCASPLPQKRPSMKEALQALE 778
+ +++ YSC LP+KRP+ ++ L ++E
Sbjct: 233 -----TIYQIMYSCWHELPEKRPTFQQLLSSIE 260
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 43/213 (20%)
Query: 499 GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNG 556
G +AV+++ ++ + RDFE ++ ++ L H N+V+ +G + + +I +++P G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
SL + + + + L+ + +G+ +L K+++H +L RN+L+ N+ K
Sbjct: 102 SLRDY----LQAHAERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 157
Query: 617 IGDFGLERLVTGDTSSSKAG--GSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXX 674
IGDFGL +++ D K G + F
Sbjct: 158 IGDFGLTKVLPQDKEXXKVKEPGESPIF-------------------------------- 185
Query: 675 XXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
++APESL K + DV+SFGV+L EL T
Sbjct: 186 ---WYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 139/330 (42%), Gaps = 55/330 (16%)
Query: 454 RQNKKGTLVIVDGDKELELETLLKASAYILGASGSSIMYKAVLEDGT-ALAVRRIGENSV 512
++NK + + E+E + LG +Y+ V + + +AV+ + E+++
Sbjct: 196 KRNKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM 255
Query: 513 DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCH 572
+ +F + V+ ++ HPNLV++ G II +F+ G+L + R+ +
Sbjct: 256 E-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY-LRECNRQEVN 313
Query: 573 LPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632
L +A ++ + +L +K +H NL RN L+G + K+ DFGL RL+TGDT +
Sbjct: 314 AV--VLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 371
Query: 633 SKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPK 692
+ AG F K + APESL K + K
Sbjct: 372 AHAGA---KFPIK--------------------------------WTAPESLAYNKFSIK 396
Query: 693 WDVYSFGVILLELLTGKVIVVD--ELGQGNGLLVEDKNXXXXXXXXXXXXXFEGKEEALL 750
DV++FGV+L E+ T + +L Q LL +D E E
Sbjct: 397 SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-------------YRMERPEGCPE 443
Query: 751 SCFKLGYSCASPLPQKRPSMKEALQALEKI 780
++L +C P RPS E QA E +
Sbjct: 444 KVYELMRACWQWNPSDRPSFAEIHQAFETM 473
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 139/330 (42%), Gaps = 55/330 (16%)
Query: 454 RQNKKGTLVIVDGDKELELETLLKASAYILGASGSSIMYKAVLEDGT-ALAVRRIGENSV 512
++NK + + E+E + LG +Y+ V + + +AV+ + E+++
Sbjct: 238 KRNKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM 297
Query: 513 DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCH 572
+ +F + V+ ++ HPNLV++ G II +F+ G+L + R+ +
Sbjct: 298 E-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY-LRECNRQEVN 355
Query: 573 LPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632
L +A ++ + +L +K +H NL RN L+G + K+ DFGL RL+TGDT +
Sbjct: 356 AV--VLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 413
Query: 633 SKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPK 692
+ AG F K + APESL K + K
Sbjct: 414 AHAGA---KFPIK--------------------------------WTAPESLAYNKFSIK 438
Query: 693 WDVYSFGVILLELLTGKVIVVD--ELGQGNGLLVEDKNXXXXXXXXXXXXXFEGKEEALL 750
DV++FGV+L E+ T + +L Q LL +D E E
Sbjct: 439 SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-------------YRMERPEGCPE 485
Query: 751 SCFKLGYSCASPLPQKRPSMKEALQALEKI 780
++L +C P RPS E QA E +
Sbjct: 486 KVYELMRACWQWNPSDRPSFAEIHQAFETM 515
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 139/332 (41%), Gaps = 59/332 (17%)
Query: 454 RQNKKGTLVIVDGDKELELETLLKASAYILGASGSSIMYKAVLEDGT-ALAVRRIGENSV 512
++NK + + E+E + LG +Y+ V + + +AV+ + E+++
Sbjct: 199 KRNKPTIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM 258
Query: 513 DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANA--RYRKMGSSP 570
+ +F + V+ ++ HPNLV++ G II +F+ G+L + + S
Sbjct: 259 E-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA 317
Query: 571 CHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
L L +A ++ + +L +K +H NL RN L+G + K+ DFGL RL+TGDT
Sbjct: 318 VVL-----LYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT 372
Query: 631 SSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPN 690
++ AG F K + APESL K +
Sbjct: 373 YTAHAGA---KFPIK--------------------------------WTAPESLAYNKFS 397
Query: 691 PKWDVYSFGVILLELLTGKVIVVD--ELGQGNGLLVEDKNXXXXXXXXXXXXXFEGKEEA 748
K DV++FGV+L E+ T + +L Q LL +D E E
Sbjct: 398 IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-------------MERPEGC 444
Query: 749 LLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780
++L +C P RPS E QA E +
Sbjct: 445 PEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 129/301 (42%), Gaps = 55/301 (18%)
Query: 483 LGASGSSIMYKAVLEDGT-ALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
LG +Y+ V + + +AV+ + E++++ +F + V+ ++ HPNLV++ G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 542 GVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGN 601
II +F+ G+L + R+ + L +A ++ + +L +K +H +
Sbjct: 85 REPPFYIIIEFMTYGNLLD-YLRECNRQEVNAV--VLLYMATQISSAMEYLEKKNFIHRD 141
Query: 602 LKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXX 661
L RN L+G + K+ DFGL RL+TGDT ++ AG F K
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA---KFPIK---------------- 182
Query: 662 XXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD--ELGQG 719
+ APESL K + K DV++FGV+L E+ T + +L Q
Sbjct: 183 ----------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 226
Query: 720 NGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779
LL +D E E ++L +C P RPS E QA E
Sbjct: 227 YELLEKDYR-------------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 273
Query: 780 I 780
+
Sbjct: 274 M 274
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 129/301 (42%), Gaps = 55/301 (18%)
Query: 483 LGASGSSIMYKAVLEDGT-ALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
LG +Y+ V + + +AV+ + E++++ +F + V+ ++ HPNLV++ G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 542 GVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGN 601
II +F+ G+L + R+ + L +A ++ + +L +K +H +
Sbjct: 85 REPPFYIITEFMTYGNLLD-YLRECNRQEVNAV--VLLYMATQISSAMEYLEKKNFIHRD 141
Query: 602 LKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXX 661
L RN L+G + K+ DFGL RL+TGDT ++ AG F K
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA---KFPIK---------------- 182
Query: 662 XXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD--ELGQG 719
+ APESL K + K DV++FGV+L E+ T + +L Q
Sbjct: 183 ----------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 226
Query: 720 NGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779
LL +D E E ++L +C P RPS E QA E
Sbjct: 227 YELLEKDYR-------------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 273
Query: 780 I 780
+
Sbjct: 274 M 274
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 129/301 (42%), Gaps = 55/301 (18%)
Query: 483 LGASGSSIMYKAVLEDGT-ALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
LG +Y+ V + + +AV+ + E++++ +F + V+ ++ HPNLV++ G
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 542 GVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGN 601
II +F+ G+L + R+ + L +A ++ + +L +K +H +
Sbjct: 81 REPPFYIIIEFMTYGNLLD-YLRECNRQEVNAV--VLLYMATQISSAMEYLEKKNFIHRD 137
Query: 602 LKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXX 661
L RN L+G + K+ DFGL RL+TGDT ++ AG F K
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA---KFPIK---------------- 178
Query: 662 XXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD--ELGQG 719
+ APESL K + K DV++FGV+L E+ T + +L Q
Sbjct: 179 ----------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 222
Query: 720 NGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779
LL +D E E ++L +C P RPS E QA E
Sbjct: 223 YELLEKDYR-------------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 269
Query: 780 I 780
+
Sbjct: 270 M 270
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 129/301 (42%), Gaps = 55/301 (18%)
Query: 483 LGASGSSIMYKAVLEDGT-ALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
LG +Y+ V + + +AV+ + E++++ +F + V+ ++ HPNLV++ G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 542 GVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGN 601
II +F+ G+L + R+ + L +A ++ + +L +K +H +
Sbjct: 85 REPPFYIITEFMTYGNLLD-YLRECNRQEVNAV--VLLYMATQISSAMEYLEKKNFIHRD 141
Query: 602 LKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXX 661
L RN L+G + K+ DFGL RL+TGDT ++ AG F K
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA---KFPIK---------------- 182
Query: 662 XXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD--ELGQG 719
+ APESL K + K DV++FGV+L E+ T + +L Q
Sbjct: 183 ----------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 226
Query: 720 NGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779
LL +D E E ++L +C P RPS E QA E
Sbjct: 227 YELLEKDYR-------------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 273
Query: 780 I 780
+
Sbjct: 274 M 274
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 129/301 (42%), Gaps = 55/301 (18%)
Query: 483 LGASGSSIMYKAVLEDGT-ALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
LG +Y+ V + + +AV+ + E++++ +F + V+ ++ HPNLV++ G
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 542 GVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGN 601
II +F+ G+L + R+ + L +A ++ + +L +K +H +
Sbjct: 84 REPPFYIITEFMTYGNLLD-YLRECNRQEVNAV--VLLYMATQISSAMEYLEKKNFIHRD 140
Query: 602 LKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXX 661
L RN L+G + K+ DFGL RL+TGDT ++ AG F K
Sbjct: 141 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA---KFPIK---------------- 181
Query: 662 XXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD--ELGQG 719
+ APESL K + K DV++FGV+L E+ T + +L Q
Sbjct: 182 ----------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 225
Query: 720 NGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779
LL +D E E ++L +C P RPS E QA E
Sbjct: 226 YELLEKDYR-------------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 272
Query: 780 I 780
+
Sbjct: 273 M 273
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 129/301 (42%), Gaps = 55/301 (18%)
Query: 483 LGASGSSIMYKAVLEDGT-ALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
LG +Y+ V + + +AV+ + E++++ +F + V+ ++ HPNLV++ G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 542 GVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGN 601
II +F+ G+L + R+ + L +A ++ + +L +K +H +
Sbjct: 85 REPPFYIITEFMTYGNLLD-YLRECNRQEVNAV--VLLYMATQISSAMEYLEKKNFIHRD 141
Query: 602 LKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXX 661
L RN L+G + K+ DFGL RL+TGDT ++ AG F K
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA---KFPIK---------------- 182
Query: 662 XXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD--ELGQG 719
+ APESL K + K DV++FGV+L E+ T + +L Q
Sbjct: 183 ----------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 226
Query: 720 NGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779
LL +D E E ++L +C P RPS E QA E
Sbjct: 227 YELLEKDYR-------------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 273
Query: 780 I 780
+
Sbjct: 274 M 274
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 129/301 (42%), Gaps = 55/301 (18%)
Query: 483 LGASGSSIMYKAVLEDGT-ALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
LG +Y+ V + + +AV+ + E++++ +F + V+ ++ HPNLV++ G
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 542 GVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGN 601
II +F+ G+L + R+ + L +A ++ + +L +K +H +
Sbjct: 93 REPPFYIITEFMTYGNLLD-YLRECNRQEVNAV--VLLYMATQISSAMEYLEKKNFIHRD 149
Query: 602 LKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXX 661
L RN L+G + K+ DFGL RL+TGDT ++ AG F K
Sbjct: 150 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA---KFPIK---------------- 190
Query: 662 XXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD--ELGQG 719
+ APESL K + K DV++FGV+L E+ T + +L Q
Sbjct: 191 ----------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 234
Query: 720 NGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779
LL +D E E ++L +C P RPS E QA E
Sbjct: 235 YELLEKDYR-------------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 281
Query: 780 I 780
+
Sbjct: 282 M 282
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 131/301 (43%), Gaps = 55/301 (18%)
Query: 483 LGASGSSIMYKAVLEDGT-ALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
LG +Y+ V + + +AV+ + E++++ +F + V+ ++ HPNLV++ G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 542 GVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGN 601
II +F+ G+L + R+ + L +A ++ + +L +K +H +
Sbjct: 80 REPPFYIITEFMTYGNLLD-YLRECNRQEVNAV--VLLYMATQISSAMEYLEKKNFIHRD 136
Query: 602 LKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXX 661
L RN L+G + K+ DFGL RL+TGDT ++ AG F K
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA---KFPIK---------------- 177
Query: 662 XXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD--ELGQG 719
+ APESL K + K DV++FGV+L E+ T + +L Q
Sbjct: 178 ----------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 221
Query: 720 NGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779
LL +D EG E + ++L +C P RPS E QA E
Sbjct: 222 YELLEKDYRMERP----------EGCPEKV---YELMRACWQWNPSDRPSFAEIHQAFET 268
Query: 780 I 780
+
Sbjct: 269 M 269
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 129/301 (42%), Gaps = 55/301 (18%)
Query: 483 LGASGSSIMYKAVLEDGT-ALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
LG +Y+ V + + +AV+ + E++++ +F + V+ ++ HPNLV++ G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 542 GVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGN 601
II +F+ G+L + R+ + L +A ++ + +L +K +H +
Sbjct: 80 REPPFYIITEFMTYGNLLD-YLRECNRQEVNAV--VLLYMATQISSAMEYLEKKNFIHRD 136
Query: 602 LKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXX 661
L RN L+G + K+ DFGL RL+TGDT ++ AG F K
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA---KFPIK---------------- 177
Query: 662 XXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD--ELGQG 719
+ APESL K + K DV++FGV+L E+ T + +L Q
Sbjct: 178 ----------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 221
Query: 720 NGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779
LL +D E E ++L +C P RPS E QA E
Sbjct: 222 YELLEKDYR-------------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 268
Query: 780 I 780
+
Sbjct: 269 M 269
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 129/301 (42%), Gaps = 55/301 (18%)
Query: 483 LGASGSSIMYKAVLEDGT-ALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
LG +Y+ V + + +AV+ + E++++ +F + V+ ++ HPNLV++ G
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 542 GVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGN 601
II +F+ G+L + R+ + L +A ++ + +L +K +H +
Sbjct: 82 REPPFYIITEFMTYGNLLD-YLRECNRQEVNAV--VLLYMATQISSAMEYLEKKNFIHRD 138
Query: 602 LKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXX 661
L RN L+G + K+ DFGL RL+TGDT ++ AG F K
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA---KFPIK---------------- 179
Query: 662 XXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD--ELGQG 719
+ APESL K + K DV++FGV+L E+ T + +L Q
Sbjct: 180 ----------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 223
Query: 720 NGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779
LL +D E E ++L +C P RPS E QA E
Sbjct: 224 YELLEKDYR-------------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 270
Query: 780 I 780
+
Sbjct: 271 M 271
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 129/303 (42%), Gaps = 59/303 (19%)
Query: 483 LGASGSSIMYKAVLEDGT-ALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
LG +Y+ V + + +AV+ + E++++ +F + V+ ++ HPNLV++ G
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 542 GVDEKLIIYDFVPNGSLANA--RYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVH 599
II +F+ G+L + + S L L +A ++ + +L +K +H
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLEKKNFIH 139
Query: 600 GNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXX 659
+L RN L+G + K+ DFGL RL+TGDT ++ AG F K
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA---KFPIK-------------- 182
Query: 660 XXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD--ELG 717
+ APESL K + K DV++FGV+L E+ T + +L
Sbjct: 183 ------------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 224
Query: 718 QGNGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQAL 777
Q LL +D E E ++L +C P RPS E QA
Sbjct: 225 QVYELLEKDYR-------------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 271
Query: 778 EKI 780
E +
Sbjct: 272 ETM 274
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 129/301 (42%), Gaps = 55/301 (18%)
Query: 483 LGASGSSIMYKAVLEDGT-ALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
LG +Y+ V + + +AV+ + E++++ +F + V+ ++ HPNLV++ G
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 542 GVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGN 601
II +F+ G+L + R+ + L +A ++ + +L +K +H +
Sbjct: 82 REPPFYIITEFMTYGNLLD-YLRECNRQEVNAV--VLLYMATQISSAMEYLEKKNFIHRD 138
Query: 602 LKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXX 661
L RN L+G + K+ DFGL RL+TGDT ++ AG F K
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA---KFPIK---------------- 179
Query: 662 XXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD--ELGQG 719
+ APESL K + K DV++FGV+L E+ T + +L Q
Sbjct: 180 ----------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 223
Query: 720 NGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779
LL +D E E ++L +C P RPS E QA E
Sbjct: 224 YELLEKDYR-------------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 270
Query: 780 I 780
+
Sbjct: 271 M 271
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 129/303 (42%), Gaps = 59/303 (19%)
Query: 483 LGASGSSIMYKAVLEDGT-ALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
LG +Y+ V + + +AV+ + E++++ +F + V+ ++ HPNLV++ G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 542 GVDEKLIIYDFVPNGSLANA--RYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVH 599
II +F+ G+L + + S L L +A ++ + +L +K +H
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLEKKNFIH 134
Query: 600 GNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXX 659
+L RN L+G + K+ DFGL RL+TGDT ++ AG F K
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA---KFPIK-------------- 177
Query: 660 XXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD--ELG 717
+ APESL K + K DV++FGV+L E+ T + +L
Sbjct: 178 ------------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 219
Query: 718 QGNGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQAL 777
Q LL +D E E ++L +C P RPS E QA
Sbjct: 220 QVYELLEKDYR-------------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 266
Query: 778 EKI 780
E +
Sbjct: 267 ETM 269
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 129/303 (42%), Gaps = 59/303 (19%)
Query: 483 LGASGSSIMYKAVLEDGT-ALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
LG +Y+ V + + +AV+ + E++++ +F + V+ ++ HPNLV++ G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 542 GVDEKLIIYDFVPNGSLANA--RYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVH 599
II +F+ G+L + + S L L +A ++ + +L +K +H
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLEKKNFIH 134
Query: 600 GNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXX 659
+L RN L+G + K+ DFGL RL+TGDT ++ AG F K
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA---KFPIK-------------- 177
Query: 660 XXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD--ELG 717
+ APESL K + K DV++FGV+L E+ T + +L
Sbjct: 178 ------------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 219
Query: 718 QGNGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQAL 777
Q LL +D E E ++L +C P RPS E QA
Sbjct: 220 QVYELLEKDYR-------------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 266
Query: 778 EKI 780
E +
Sbjct: 267 ETM 269
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 129/303 (42%), Gaps = 59/303 (19%)
Query: 483 LGASGSSIMYKAVLEDGT-ALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
LG +Y+ V + + +AV+ + E++++ +F + V+ ++ HPNLV++ G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 542 GVDEKLIIYDFVPNGSLANA--RYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVH 599
II +F+ G+L + + S L L +A ++ + +L +K +H
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLEKKNFIH 134
Query: 600 GNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXX 659
+L RN L+G + K+ DFGL RL+TGDT ++ AG F K
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA---KFPIK-------------- 177
Query: 660 XXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD--ELG 717
+ APESL K + K DV++FGV+L E+ T + +L
Sbjct: 178 ------------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 219
Query: 718 QGNGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQAL 777
Q LL +D E E ++L +C P RPS E QA
Sbjct: 220 QVYELLEKDYR-------------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 266
Query: 778 EKI 780
E +
Sbjct: 267 ETM 269
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 129/303 (42%), Gaps = 59/303 (19%)
Query: 483 LGASGSSIMYKAVLEDGT-ALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
LG +Y+ V + + +AV+ + E++++ +F + V+ ++ HPNLV++ G
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 542 GVDEKLIIYDFVPNGSLANA--RYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVH 599
II +F+ G+L + + S L L +A ++ + +L +K +H
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLEKKNFIH 134
Query: 600 GNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXX 659
+L RN L+G + K+ DFGL RL+TGDT ++ AG F K
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA---KFPIK-------------- 177
Query: 660 XXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD--ELG 717
+ APESL K + K DV++FGV+L E+ T + +L
Sbjct: 178 ------------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 219
Query: 718 QGNGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQAL 777
Q LL +D E E ++L +C P RPS E QA
Sbjct: 220 QVYELLEKDYR-------------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 266
Query: 778 EKI 780
E +
Sbjct: 267 ETM 269
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 129/301 (42%), Gaps = 55/301 (18%)
Query: 483 LGASGSSIMYKAVLEDGT-ALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
LG +Y+ V + + +AV+ + E++++ +F + V+ ++ HPNLV++ G
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 542 GVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGN 601
II +F+ G+L + R+ + L +A ++ + +L +K +H +
Sbjct: 81 REPPFYIITEFMTYGNLLD-YLRECNRQEVNAV--VLLYMATQISSAMEYLEKKNFIHRD 137
Query: 602 LKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXX 661
L RN L+G + K+ DFGL RL+TGDT ++ AG F K
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGA---KFPIK---------------- 178
Query: 662 XXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD--ELGQG 719
+ APESL K + K DV++FGV+L E+ T + +L Q
Sbjct: 179 ----------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 222
Query: 720 NGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779
LL +D E E ++L +C P RPS E QA E
Sbjct: 223 YELLEKDYR-------------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 269
Query: 780 I 780
+
Sbjct: 270 M 270
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 44/213 (20%)
Query: 499 GTALAVRRIGENSVDRFRD-FETQVRVIAKLVHPNLVRIRGFYWGVDEKLI--IYDFVPN 555
G +AV+ + E + R ++ ++ ++ L H ++V+ +G EK + + ++VP
Sbjct: 38 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 97
Query: 556 GSLANARYRKMGSSPCHLPWEARLKI-AKGVARGLAFLHEKKHVHGNLKPRNVLLGNDME 614
GSL + P H A+L + A+ + G+A+LH + ++H L RNVLL ND
Sbjct: 98 GSLRD-------YLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRL 150
Query: 615 PKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXX 674
KIGDFGL +KA + R F
Sbjct: 151 VKIGDFGL----------AKAVPEGHEYYRVREDGDSPVF-------------------- 180
Query: 675 XXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
++APE L+ K DV+SFGV L ELLT
Sbjct: 181 ---WYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 129/301 (42%), Gaps = 55/301 (18%)
Query: 483 LGASGSSIMYKAVLEDGT-ALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
LG +Y+ V + + +AV+ + E++++ +F + V+ ++ HPNLV++ G
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 542 GVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGN 601
II +F+ G+L + R+ + L +A ++ + +L +K +H +
Sbjct: 82 REPPFYIITEFMTYGNLLD-YLRECNRQEVNAV--VLLYMATQISSAMEYLEKKNFIHRD 138
Query: 602 LKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXX 661
L RN L+G + K+ DFGL RL+TGDT ++ AG F K
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGA---KFPIK---------------- 179
Query: 662 XXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD--ELGQG 719
+ APESL K + K DV++FGV+L E+ T + +L Q
Sbjct: 180 ----------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV 223
Query: 720 NGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779
LL +D E E ++L +C P RPS E QA E
Sbjct: 224 YELLEKDYR-------------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 270
Query: 780 I 780
+
Sbjct: 271 M 271
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 44/213 (20%)
Query: 499 GTALAVRRIGENSVDRFRD-FETQVRVIAKLVHPNLVRIRGFYWGVDEKLI--IYDFVPN 555
G +AV+ + E + R ++ ++ ++ L H ++V+ +G EK + + ++VP
Sbjct: 37 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 96
Query: 556 GSLANARYRKMGSSPCHLPWEARLKI-AKGVARGLAFLHEKKHVHGNLKPRNVLLGNDME 614
GSL + P H A+L + A+ + G+A+LH + ++H L RNVLL ND
Sbjct: 97 GSLRD-------YLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRL 149
Query: 615 PKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXX 674
KIGDFGL +KA + R F
Sbjct: 150 VKIGDFGL----------AKAVPEGHEYYRVREDGDSPVF-------------------- 179
Query: 675 XXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
++APE L+ K DV+SFGV L ELLT
Sbjct: 180 ---WYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 100/231 (43%), Gaps = 47/231 (20%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFY 540
+GA +++A G+ +AV+ + E +R +F +V ++ +L HPN+V G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMGSSPC--HLPWEARLKIAKGVARGLAFLHEKKH- 597
I+ +++ GSL YR + S L RL +A VA+G+ +LH +
Sbjct: 104 TQPPNLSIVTEYLSRGSL----YRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPP 159
Query: 598 -VHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQD 656
VH NLK N+L+ K+ DFGL RL A F S +S A
Sbjct: 160 IVHRNLKSPNLLVDKKYTVKVCDFGLSRL------------KASTFLSSKSAAG------ 201
Query: 657 LXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ APE LR N K DVYSFGVIL EL T
Sbjct: 202 ------------------TPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 99/231 (42%), Gaps = 42/231 (18%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
+G+ +YK A+ + + + + + F+ +V V+ K H N++ G Y
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YST 90
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ I+ + SL Y + +S + + IA+ ARG+ +LH K +H +L
Sbjct: 91 APQLAIVTQWCEGSSL----YHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDL 146
Query: 603 KPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXX 662
K N+ L D KIGDFGL T S+ GS + F+ L
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLA------TEKSRWSGSHQ-------------FEQL----- 182
Query: 663 XXXXXXXXXXXXXXXYHAPESLRSIKPNP---KWDVYSFGVILLELLTGKV 710
+ APE +R NP + DVY+FG++L EL+TG++
Sbjct: 183 ----------SGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQL 223
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 99/231 (42%), Gaps = 42/231 (18%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
+G+ +YK A+ + + + + + F+ +V V+ K H N++ G Y
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YST 90
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ I+ + SL Y + +S + + IA+ ARG+ +LH K +H +L
Sbjct: 91 KPQLAIVTQWCEGSSL----YHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDL 146
Query: 603 KPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXX 662
K N+ L D KIGDFGL T S+ GS + F+ L
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLA------TEKSRWSGSHQ-------------FEQL----- 182
Query: 663 XXXXXXXXXXXXXXXYHAPESLRSIKPNP---KWDVYSFGVILLELLTGKV 710
+ APE +R NP + DVY+FG++L EL+TG++
Sbjct: 183 ----------SGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQL 223
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 128/303 (42%), Gaps = 59/303 (19%)
Query: 483 LGASGSSIMYKAVLEDGT-ALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
LG +Y+ V + + +AV+ + E++++ +F + V+ ++ HPNLV++ G
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 542 GVDEKLIIYDFVPNGSLANA--RYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVH 599
II +F+ G+L + + S L L +A ++ + +L +K +H
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLEKKNFIH 132
Query: 600 GNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXX 659
+L RN L+G + K+ DFGL RL+TGDT ++ AG F K
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA---KFPIK-------------- 175
Query: 660 XXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDEL--G 717
+ APESL K + K DV++FGV+L E+ T + +
Sbjct: 176 ------------------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPS 217
Query: 718 QGNGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQAL 777
Q LL +D E E ++L +C P RPS E QA
Sbjct: 218 QVYELLEKDYR-------------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 264
Query: 778 EKI 780
E +
Sbjct: 265 ETM 267
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 101/231 (43%), Gaps = 42/231 (18%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
+G+ +YK A+ + ++ + + ++F+ F +V V+ K H N++ G Y
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG-YMT 102
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
D I+ + SL Y+ + + IA+ A+G+ +LH K +H ++
Sbjct: 103 KDNLAIVTQWCEGSSL----YKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDM 158
Query: 603 KPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXX 662
K N+ L + KIGDFGL T S+ GS + ++ T S
Sbjct: 159 KSNNIFLHEGLTVKIGDFGLA------TVKSRWSGSQQ---VEQPTGS------------ 197
Query: 663 XXXXXXXXXXXXXXXYHAPESLRSIKPNP---KWDVYSFGVILLELLTGKV 710
+ APE +R NP + DVYS+G++L EL+TG++
Sbjct: 198 -------------VLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGEL 235
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 99/231 (42%), Gaps = 42/231 (18%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
+G+ +YK A+ + + + + + F+ +V V+ K H N++ G Y
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YST 78
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ I+ + SL Y + +S + + IA+ ARG+ +LH K +H +L
Sbjct: 79 KPQLAIVTQWCEGSSL----YHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDL 134
Query: 603 KPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXX 662
K N+ L D KIGDFGL T S+ GS + F+ L
Sbjct: 135 KSNNIFLHEDNTVKIGDFGLA------TVKSRWSGSHQ-------------FEQL----- 170
Query: 663 XXXXXXXXXXXXXXXYHAPESLRSIKPNP---KWDVYSFGVILLELLTGKV 710
+ APE +R NP + DVY+FG++L EL+TG++
Sbjct: 171 ----------SGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQL 211
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 98/216 (45%), Gaps = 31/216 (14%)
Query: 497 EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKL-IIYDFVPN 555
E G + ++ + + R F +V+V+ L HPN+++ G + D++L I +++
Sbjct: 33 ETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYK-DKRLNFITEYIKG 91
Query: 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP 615
G+L + S PW R+ AK +A G+A+LH +H +L N L+ +
Sbjct: 92 GTLRGI----IKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNV 147
Query: 616 KIGDFGLERLVTGDTSSSKAGGSARNFG-SKRSTASRDSFQDLXXXXXXXXXXXXXXXXX 674
+ DFGL RL+ + + + S + KR T + +
Sbjct: 148 VVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPY-------------------- 187
Query: 675 XXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGKV 710
+ APE + + K DV+SFG++L E++ G+V
Sbjct: 188 ---WMAPEMINGRSYDEKVDVFSFGIVLCEII-GRV 219
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 97/209 (46%), Gaps = 43/209 (20%)
Query: 501 ALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN 560
+AV+ + E++++ +F + V+ ++ HPNLV++ G II +F+ G+L +
Sbjct: 38 TVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 96
Query: 561 A--RYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIG 618
+ S L L +A ++ + +L +K +H +L RN L+G + K+
Sbjct: 97 YLRECNRQEVSAVVL-----LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA 151
Query: 619 DFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXY 678
DFGL RL+TGDT ++ AG F K +
Sbjct: 152 DFGLSRLMTGDTXTAHAGA---KFPIK--------------------------------W 176
Query: 679 HAPESLRSIKPNPKWDVYSFGVILLELLT 707
APESL K + K DV++FGV+L E+ T
Sbjct: 177 TAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 44/228 (19%)
Query: 483 LGASGSSIMYKAVLEDGT-ALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
LG +Y+ V + + +AV+ + E++++ +F + V+ ++ HPNLV++ G
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 542 GVDEKLIIYDFVPNGSLANA--RYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVH 599
II +F+ G+L + + S L L +A ++ + +L +K +H
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAMEYLEKKNFIH 132
Query: 600 GNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXX 659
+L RN L+G + K+ DFGL RL+TGDT ++ AG F K
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGA---KFPIK-------------- 175
Query: 660 XXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ APESL K + K DV++FGV+L E+ T
Sbjct: 176 ------------------WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 42/212 (19%)
Query: 499 GTALAVRRIGENSVDRFRD-FETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPN 555
G +AV+ + + + R ++ ++ ++ L H ++++ +G EK ++ ++VP
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP 615
GSL + R + L A+ + G+A+LH + ++H NL RNVLL ND
Sbjct: 103 GSLRDYLPRHS------IGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLV 156
Query: 616 KIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXX 675
KIGDFGL +KA + R F
Sbjct: 157 KIGDFGL----------AKAVPEGHEYYRVREDGDSPVF--------------------- 185
Query: 676 XXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
++APE L+ K DV+SFGV L ELLT
Sbjct: 186 --WYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 42/212 (19%)
Query: 499 GTALAVRRIGENSVDRFRD-FETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPN 555
G +AV+ + + + R ++ ++ ++ L H ++++ +G EK ++ ++VP
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP 615
GSL + R + L A+ + G+A+LH + ++H NL RNVLL ND
Sbjct: 103 GSLRDYLPRHS------IGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLV 156
Query: 616 KIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXX 675
KIGDFGL +KA + R F
Sbjct: 157 KIGDFGL----------AKAVPEGHEYYRVREDGDSPVF--------------------- 185
Query: 676 XXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
++APE L+ K DV+SFGV L ELLT
Sbjct: 186 --WYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 113/282 (40%), Gaps = 51/282 (18%)
Query: 502 LAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANA 561
+A++ I E S+ DF + V+ KL HP LV++ G ++++F+ +G L++
Sbjct: 54 VAIKTIKEGSMSE-DDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 112
Query: 562 RYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFG 621
+ G E L + V G+A+L E +H +L RN L+G + K+ DFG
Sbjct: 113 LRTQRGL----FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFG 168
Query: 622 LERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAP 681
+ R V D +S G F K + +P
Sbjct: 169 MTRFVLDDQYTSSTG---TKFPVK--------------------------------WASP 193
Query: 682 ESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQGNGLLVEDKNXXXXXXXXXXXXX 741
E + + K DV+SFGV++ E+ + I + + N +VED +
Sbjct: 194 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE--NRSNSEVVEDISTGFRLYKPRL--- 248
Query: 742 FEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSS 783
A +++ C P+ RP+ L+ L +I S
Sbjct: 249 ------ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 284
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 119/282 (42%), Gaps = 54/282 (19%)
Query: 501 ALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN 560
+AV+ + E++++ +F + V+ ++ HPNLV++ G I+ +++P G+L +
Sbjct: 59 TVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLD 117
Query: 561 ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDF 620
R+ L +A ++ + +L +K +H +L RN L+G + K+ DF
Sbjct: 118 -YLRECNREEVTAV--VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADF 174
Query: 621 GLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHA 680
GL RL+TGDT ++ AG F K + A
Sbjct: 175 GLSRLMTGDTYTAHAGA---KFPIK--------------------------------WTA 199
Query: 681 PESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD--ELGQGNGLLVEDKNXXXXXXXXXX 738
PESL + K DV++FGV+L E+ T + +L Q LL +
Sbjct: 200 PESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYR---------- 249
Query: 739 XXXFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780
E E ++L +C P RPS E QA E +
Sbjct: 250 ---MEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAFETM 288
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 113/282 (40%), Gaps = 51/282 (18%)
Query: 502 LAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANA 561
+A++ I E ++ DF + V+ KL HP LV++ G ++++F+ +G L++
Sbjct: 34 VAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 92
Query: 562 RYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFG 621
+ G E L + V G+A+L E +H +L RN L+G + K+ DFG
Sbjct: 93 LRTQRGLFAA----ETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFG 148
Query: 622 LERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAP 681
+ R V D +S G F K + +P
Sbjct: 149 MTRFVLDDQYTSSTG---TKFPVK--------------------------------WASP 173
Query: 682 ESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQGNGLLVEDKNXXXXXXXXXXXXX 741
E + + K DV+SFGV++ E+ + I + + N +VED +
Sbjct: 174 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE--NRSNSEVVEDISTGFRLYKPRL--- 228
Query: 742 FEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSS 783
A +++ C P+ RP+ L+ L I +S
Sbjct: 229 ------ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAAIAAS 264
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 113/282 (40%), Gaps = 51/282 (18%)
Query: 502 LAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANA 561
+A++ I E ++ DF + V+ KL HP LV++ G ++++F+ +G L++
Sbjct: 34 VAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 92
Query: 562 RYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFG 621
+ G E L + V G+A+L E +H +L RN L+G + K+ DFG
Sbjct: 93 LRTQRGL----FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFG 148
Query: 622 LERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAP 681
+ R V D +S G F K + +P
Sbjct: 149 MTRFVLDDQYTSSTG---TKFPVK--------------------------------WASP 173
Query: 682 ESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQGNGLLVEDKNXXXXXXXXXXXXX 741
E + + K DV+SFGV++ E+ + I + + N +VED +
Sbjct: 174 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE--NRSNSEVVEDISTGFRLYKPRL--- 228
Query: 742 FEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSS 783
A +++ C P+ RP+ L+ L +I S
Sbjct: 229 ------ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 264
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 113/282 (40%), Gaps = 51/282 (18%)
Query: 502 LAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANA 561
+A++ I E ++ DF + V+ KL HP LV++ G ++++F+ +G L++
Sbjct: 32 VAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 90
Query: 562 RYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFG 621
+ G E L + V G+A+L E +H +L RN L+G + K+ DFG
Sbjct: 91 LRTQRGL----FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFG 146
Query: 622 LERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAP 681
+ R V D +S G F K + +P
Sbjct: 147 MTRFVLDDQYTSSTG---TKFPVK--------------------------------WASP 171
Query: 682 ESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQGNGLLVEDKNXXXXXXXXXXXXX 741
E + + K DV+SFGV++ E+ + I + + N +VED +
Sbjct: 172 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE--NRSNSEVVEDISTGFRLYKPRL--- 226
Query: 742 FEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSS 783
A +++ C P+ RP+ L+ L +I S
Sbjct: 227 ------ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 262
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 126/333 (37%), Gaps = 91/333 (27%)
Query: 482 ILGASGSSIMYKAVLE-DGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFY 540
++G+ G ++KA DG +RR+ N+ E +V+ +AKL H N+V G +
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIRRVKYNN----EKAEREVKALAKLDHVNIVHYNGCW 74
Query: 541 WGVDEK-----------------------------LIIYDFVPNGSLANARYRKMGSSPC 571
G D I +F G+L ++ G
Sbjct: 75 DGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK-- 132
Query: 572 HLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTS 631
L L++ + + +G+ ++H KK +H +LKP N+ L + + KIGDFGL + D
Sbjct: 133 -LDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK 191
Query: 632 SSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNP 691
+++ G+ R Y +PE + S
Sbjct: 192 RTRSKGTLR-------------------------------------YMSPEQISSQDYGK 214
Query: 692 KWDVYSFGVILLELLTGKVIVVDELGQGNGLLVEDKNXXXXXXXXXXXXXFEGKEEALLS 751
+ D+Y+ G+IL ELL V D + + + ++ F+ KE+ LL
Sbjct: 215 EVDLYALGLILAELLH----VCDTAFETSKFFTDLRD-------GIISDIFDKKEKTLLQ 263
Query: 752 CFKLGYSCASPLPQKRPSMKEALQALEKIPSSP 784
S P+ RP+ E L+ L SP
Sbjct: 264 ------KLLSKKPEDRPNTSEILRTLTVWKKSP 290
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 113/282 (40%), Gaps = 51/282 (18%)
Query: 502 LAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANA 561
+A++ I E ++ DF + V+ KL HP LV++ G ++++F+ +G L++
Sbjct: 37 VAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 95
Query: 562 RYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFG 621
+ G E L + V G+A+L E +H +L RN L+G + K+ DFG
Sbjct: 96 LRTQRGLFAA----ETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFG 151
Query: 622 LERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAP 681
+ R V D +S G F K + +P
Sbjct: 152 MTRFVLDDQYTSSTG---TKFPVK--------------------------------WASP 176
Query: 682 ESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQGNGLLVEDKNXXXXXXXXXXXXX 741
E + + K DV+SFGV++ E+ + I + + N +VED +
Sbjct: 177 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE--NRSNSEVVEDISTGFRLYKPRL--- 231
Query: 742 FEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSS 783
A +++ C P+ RP+ L+ L +I S
Sbjct: 232 ------ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 40/212 (18%)
Query: 499 GTALAVRRIG-ENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW--GVDEKLIIYDFVPN 555
G +AV+ + E+ + D + ++ ++ L H N+V+ +G G + +I +F+P+
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 109
Query: 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP 615
GSL Y + +L + +LK A + +G+ +L +++VH +L RNVL+ ++ +
Sbjct: 110 GSLKE--YLPKNKNKINL--KQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQV 165
Query: 616 KIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXX 675
KIGDFGL + + D RDS
Sbjct: 166 KIGDFGLTKAIETDKEXXTV------------KDDRDS---------------------P 192
Query: 676 XXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
++APE L K DV+SFGV L ELLT
Sbjct: 193 VFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 93/219 (42%), Gaps = 42/219 (19%)
Query: 497 EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556
+D +AV+ + + S + +DF + ++ L H ++V+ G D +++++++ +G
Sbjct: 41 QDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHG 100
Query: 557 SL--------ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVL 608
L +A G+ P L L IA+ +A G+ +L + VH +L RN L
Sbjct: 101 DLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCL 160
Query: 609 LGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXX 668
+G ++ KIGDFG+ R V T + GG
Sbjct: 161 VGENLLVKIGDFGMSRDVYS-TDYYRVGGHT----------------------------- 190
Query: 669 XXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ PES+ K + DV+S GV+L E+ T
Sbjct: 191 ----MLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 99/232 (42%), Gaps = 49/232 (21%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFY 540
+GA +++A G+ +AV+ + E +R +F +V ++ +L HPN+V G
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMGSSPC--HLPWEARLKIAKGVARGLAFLHEKKH- 597
I+ +++ GSL YR + S L RL +A VA+G+ +LH +
Sbjct: 104 TQPPNLSIVTEYLSRGSL----YRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPP 159
Query: 598 -VHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK-AGGSARNFGSKRSTASRDSFQ 655
VH +LK N+L+ K+ DFGL RL SK A G+
Sbjct: 160 IVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPE--------------- 204
Query: 656 DLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ APE LR N K DVYSFGVIL EL T
Sbjct: 205 ----------------------WMAPEVLRDEPSNEKSDVYSFGVILWELAT 234
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 40/212 (18%)
Query: 499 GTALAVRRIG-ENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW--GVDEKLIIYDFVPN 555
G +AV+ + E+ + D + ++ ++ L H N+V+ +G G + +I +F+P+
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 97
Query: 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP 615
GSL Y + +L + +LK A + +G+ +L +++VH +L RNVL+ ++ +
Sbjct: 98 GSLKE--YLPKNKNKINL--KQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQV 153
Query: 616 KIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXX 675
KIGDFGL + + D RDS
Sbjct: 154 KIGDFGLTKAIETDKEXXTV------------KDDRDS---------------------P 180
Query: 676 XXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
++APE L K DV+SFGV L ELLT
Sbjct: 181 VFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 125/322 (38%), Gaps = 78/322 (24%)
Query: 482 ILGASGSSIMYKAVLE-DGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFY 540
++G+ G ++KA DG ++R+ N+ E +V+ +AKL H N+V G +
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCW 73
Query: 541 WGVDEK----------------LIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKG 584
G D I +F G+L ++ G L L++ +
Sbjct: 74 DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK---LDKVLALELFEQ 130
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ +G+ ++H KK ++ +LKP N+ L + + KIGDFGL + D ++ G+ R
Sbjct: 131 ITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLR---- 186
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
Y +PE + S + D+Y+ G+IL E
Sbjct: 187 ---------------------------------YMSPEQISSQDYGKEVDLYALGLILAE 213
Query: 705 LLTGKVIVVDELGQGNGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSCASPLP 764
LL V D + + + ++ F+ KE+ LL S P
Sbjct: 214 LLH----VCDTAFETSKFFTDLRD-------GIISDIFDKKEKTLLQ------KLLSKKP 256
Query: 765 QKRPSMKEALQALEKIPSSPSP 786
+ RP+ E L+ L SP
Sbjct: 257 EDRPNTSEILRTLTVWKKSPEK 278
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 111/275 (40%), Gaps = 56/275 (20%)
Query: 65 SWNGVTCASPGEGN--NDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDXXXXXXXXXXX 122
+W GV C + + N+ + GL LP IP+ L + +L +L
Sbjct: 37 TWLGVLCDTDTQTYRVNNLDLSGLNLPKPY---PIPSSLANLPYLNFLYIGGINNLVGPI 93
Query: 123 X-XXXXXXQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTI 181
QL L +++ +SG +P+ + + L L+ S NAL+G LP S+++L +L
Sbjct: 94 PPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVG 153
Query: 182 VSLKNNYFSDGLPSKFNSVQVL----DLSSNLINGSLPPDIGGYSLRYLNLSYNRLSGEI 237
++ N S +P + S L +S N + G +PP +L +++LS N L G+
Sbjct: 154 ITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDA 213
Query: 238 PPQFGE---------------------------------------KIPVNAT-------I 251
FG +P T +
Sbjct: 214 SVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSL 273
Query: 252 DLSFNNLTGEIPESNVFMNQESSSFSGNLDLCGQP 286
++SFNNL GEIP+ + S+++ N LCG P
Sbjct: 274 NVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSP 308
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 88/196 (44%), Gaps = 43/196 (21%)
Query: 516 RDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPW 575
RDF ++ ++ + HPN++ + G +II +F+ NGSL + + G
Sbjct: 79 RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG----QFTV 134
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTS---- 631
+ + +G+A G+ +L + +VH +L RN+L+ +++ K+ DFGL R + DTS
Sbjct: 135 IQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY 194
Query: 632 SSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNP 691
+S GG + APE+++ K
Sbjct: 195 TSALGGKI-----------------------------------PIRWTAPEAIQYRKFTS 219
Query: 692 KWDVYSFGVILLELLT 707
DV+S+G+++ E+++
Sbjct: 220 ASDVWSYGIVMWEVMS 235
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 112/282 (39%), Gaps = 51/282 (18%)
Query: 502 LAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANA 561
+A++ I E ++ DF + V+ KL HP LV++ G ++ +F+ +G L++
Sbjct: 35 VAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDY 93
Query: 562 RYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFG 621
+ G E L + V G+A+L E +H +L RN L+G + K+ DFG
Sbjct: 94 LRTQRGLFAA----ETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFG 149
Query: 622 LERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAP 681
+ R V D +S G F K + +P
Sbjct: 150 MTRFVLDDQYTSSTG---TKFPVK--------------------------------WASP 174
Query: 682 ESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQGNGLLVEDKNXXXXXXXXXXXXX 741
E + + K DV+SFGV++ E+ + I + + N +VED +
Sbjct: 175 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE--NRSNSEVVEDISTGFRLYKPRL--- 229
Query: 742 FEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSS 783
A +++ C P+ RP+ L+ L +I S
Sbjct: 230 ------ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 97/211 (45%), Gaps = 39/211 (18%)
Query: 499 GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNG 556
G +AV+++ + D+ RDF+ +++++ L +V+ RG +G + ++ +++P+G
Sbjct: 52 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 111
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
L + R L L + + +G+ +L ++ VH +L RN+L+ ++ K
Sbjct: 112 CLRDFLQRHRA----RLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVK 167
Query: 617 IGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXX 676
I DFGL +L+ D +++ R F
Sbjct: 168 IADFGLAKLLPLD----------KDYYVVREPGQSPIF---------------------- 195
Query: 677 XYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
++APESL + + DV+SFGV+L EL T
Sbjct: 196 -WYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 74/144 (51%), Gaps = 11/144 (7%)
Query: 497 EDGTALAV----RRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFY-----WGVDEKL 547
EDGT+L V ++ +S +F ++ + HPN++R+ G G+ + +
Sbjct: 58 EDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPM 117
Query: 548 IIYDFVPNGSLAN-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRN 606
+I F+ G L Y ++ + P H+P + LK +A G+ +L + +H +L RN
Sbjct: 118 VILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARN 177
Query: 607 VLLGNDMEPKIGDFGL-ERLVTGD 629
+L +DM + DFGL +++ +GD
Sbjct: 178 CMLRDDMTVCVADFGLSKKIYSGD 201
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 107/261 (40%), Gaps = 42/261 (16%)
Query: 453 ERQNKKGTLVIVDGDKELELETLLKASAYILGASGSSIMYKAVLEDGTALAVRRIGENSV 512
E +N+ TL D + E+ +G+ +YK A+ + + +
Sbjct: 14 EDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTP 73
Query: 513 DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCH 572
+ + F+ +V V+ K H N++ G Y + I+ + SL Y +
Sbjct: 74 QQLQAFKNEVGVLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGSSL----YHHLHIIETK 128
Query: 573 LPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632
+ IA+ A+G+ +LH K +H +LK N+ L D+ KIGDFGL T
Sbjct: 129 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA------TEK 182
Query: 633 SKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNP- 691
S+ GS + F+ L + APE +R NP
Sbjct: 183 SRWSGSHQ-------------FEQL---------------SGSILWMAPEVIRMQDKNPY 214
Query: 692 --KWDVYSFGVILLELLTGKV 710
+ DVY+FG++L EL+TG++
Sbjct: 215 SFQSDVYAFGIVLYELMTGQL 235
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 97/211 (45%), Gaps = 39/211 (18%)
Query: 499 GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNG 556
G +AV+++ + D+ RDF+ +++++ L +V+ RG +G + ++ +++P+G
Sbjct: 40 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 99
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
L + R L L + + +G+ +L ++ VH +L RN+L+ ++ K
Sbjct: 100 CLRDFLQRHRA----RLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVK 155
Query: 617 IGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXX 676
I DFGL +L+ D +++ R F
Sbjct: 156 IADFGLAKLLPLD----------KDYYVVREPGQSPIF---------------------- 183
Query: 677 XYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
++APESL + + DV+SFGV+L EL T
Sbjct: 184 -WYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 97/211 (45%), Gaps = 39/211 (18%)
Query: 499 GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNG 556
G +AV+++ + D+ RDF+ +++++ L +V+ RG +G + ++ +++P+G
Sbjct: 39 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 98
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
L + R L L + + +G+ +L ++ VH +L RN+L+ ++ K
Sbjct: 99 CLRDFLQRHRA----RLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVK 154
Query: 617 IGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXX 676
I DFGL +L+ D +++ R F
Sbjct: 155 IADFGLAKLLPLD----------KDYYVVREPGQSPIF---------------------- 182
Query: 677 XYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
++APESL + + DV+SFGV+L EL T
Sbjct: 183 -WYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 97/231 (41%), Gaps = 42/231 (18%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
+G+ +YK A+ + + + + + F+ +V V+ K H N++ G Y
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YST 74
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ I+ + SL Y + + IA+ A+G+ +LH K +H +L
Sbjct: 75 APQLAIVTQWCEGSSL----YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 130
Query: 603 KPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXX 662
K N+ L D+ KIGDFGL T S+ GS + F+ L
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLA------TVKSRWSGSHQ-------------FEQL----- 166
Query: 663 XXXXXXXXXXXXXXXYHAPESLRSIKPNP---KWDVYSFGVILLELLTGKV 710
+ APE +R NP + DVY+FG++L EL+TG++
Sbjct: 167 ----------SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 207
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 97/231 (41%), Gaps = 42/231 (18%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
+G+ +YK A+ + + + + + F+ +V V+ K H N++ G Y
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YST 74
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ I+ + SL Y + + IA+ A+G+ +LH K +H +L
Sbjct: 75 KPQLAIVTQWCEGSSL----YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 130
Query: 603 KPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXX 662
K N+ L D+ KIGDFGL T S+ GS + F+ L
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLA------TEKSRWSGSHQ-------------FEQL----- 166
Query: 663 XXXXXXXXXXXXXXXYHAPESLRSIKPNP---KWDVYSFGVILLELLTGKV 710
+ APE +R NP + DVY+FG++L EL+TG++
Sbjct: 167 ----------SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 207
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 107/261 (40%), Gaps = 42/261 (16%)
Query: 453 ERQNKKGTLVIVDGDKELELETLLKASAYILGASGSSIMYKAVLEDGTALAVRRIGENSV 512
E +N+ TL D + E+ +G+ +YK A+ + + +
Sbjct: 14 EDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTP 73
Query: 513 DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCH 572
+ + F+ +V V+ K H N++ G Y + I+ + SL Y +
Sbjct: 74 QQLQAFKNEVGVLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGSSL----YHHLHIIETK 128
Query: 573 LPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632
+ IA+ A+G+ +LH K +H +LK N+ L D+ KIGDFGL T
Sbjct: 129 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA------TVK 182
Query: 633 SKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNP- 691
S+ GS + F+ L + APE +R NP
Sbjct: 183 SRWSGSHQ-------------FEQL---------------SGSILWMAPEVIRMQDKNPY 214
Query: 692 --KWDVYSFGVILLELLTGKV 710
+ DVY+FG++L EL+TG++
Sbjct: 215 SFQSDVYAFGIVLYELMTGQL 235
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 107/261 (40%), Gaps = 42/261 (16%)
Query: 453 ERQNKKGTLVIVDGDKELELETLLKASAYILGASGSSIMYKAVLEDGTALAVRRIGENSV 512
E +N+ TL D + E+ +G+ +YK A+ + + +
Sbjct: 13 EDRNRMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTP 72
Query: 513 DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCH 572
+ + F+ +V V+ K H N++ G Y + I+ + SL Y +
Sbjct: 73 QQLQAFKNEVGVLRKTRHVNILLFMG-YSTKPQLAIVTQWCEGSSL----YHHLHIIETK 127
Query: 573 LPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632
+ IA+ A+G+ +LH K +H +LK N+ L D+ KIGDFGL T
Sbjct: 128 FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA------TVK 181
Query: 633 SKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNP- 691
S+ GS + F+ L + APE +R NP
Sbjct: 182 SRWSGSHQ-------------FEQL---------------SGSILWMAPEVIRMQDKNPY 213
Query: 692 --KWDVYSFGVILLELLTGKV 710
+ DVY+FG++L EL+TG++
Sbjct: 214 SFQSDVYAFGIVLYELMTGQL 234
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 87/196 (44%), Gaps = 43/196 (21%)
Query: 516 RDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPW 575
RDF ++ ++ + HPN++ + G +II +F+ NGSL + + G
Sbjct: 53 RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG----QFTV 108
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTS---- 631
+ + +G+A G+ +L + +VH L RN+L+ +++ K+ DFGL R + DTS
Sbjct: 109 IQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY 168
Query: 632 SSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNP 691
+S GG + APE+++ K
Sbjct: 169 TSALGGKI-----------------------------------PIRWTAPEAIQYRKFTS 193
Query: 692 KWDVYSFGVILLELLT 707
DV+S+G+++ E+++
Sbjct: 194 ASDVWSYGIVMWEVMS 209
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 97/231 (41%), Gaps = 42/231 (18%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
+G+ +YK A+ + + + + + F+ +V V+ K H N++ G Y
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YST 94
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ I+ + SL Y + + IA+ A+G+ +LH K +H +L
Sbjct: 95 KPQLAIVTQWCEGSSL----YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 150
Query: 603 KPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXX 662
K N+ L D+ KIGDFGL T S+ GS + F+ L
Sbjct: 151 KSNNIFLHEDLTVKIGDFGLA------TEKSRWSGSHQ-------------FEQL----- 186
Query: 663 XXXXXXXXXXXXXXXYHAPESLRSIKPNP---KWDVYSFGVILLELLTGKV 710
+ APE +R NP + DVY+FG++L EL+TG++
Sbjct: 187 ----------SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 227
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 97/231 (41%), Gaps = 42/231 (18%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
+G+ +YK A+ + + + + + F+ +V V+ K H N++ G Y
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YST 79
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ I+ + SL Y + + IA+ A+G+ +LH K +H +L
Sbjct: 80 KPQLAIVTQWCEGSSL----YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 135
Query: 603 KPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXX 662
K N+ L D+ KIGDFGL T S+ GS + F+ L
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLA------TVKSRWSGSHQ-------------FEQL----- 171
Query: 663 XXXXXXXXXXXXXXXYHAPESLRSIKPNP---KWDVYSFGVILLELLTGKV 710
+ APE +R NP + DVY+FG++L EL+TG++
Sbjct: 172 ----------SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 212
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 97/231 (41%), Gaps = 42/231 (18%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
+G+ +YK A+ + + + + + F+ +V V+ K H N++ G+
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY--S 73
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+L I GS + Y + + IA+ A+G+ +LH K +H +L
Sbjct: 74 TKPQLAIVTQWCEGS---SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 130
Query: 603 KPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXX 662
K N+ L D+ KIGDFGL T S+ GS + F+ L
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLA------TVKSRWSGSHQ-------------FEQL----- 166
Query: 663 XXXXXXXXXXXXXXXYHAPESLRSIKPNP---KWDVYSFGVILLELLTGKV 710
+ APE +R NP + DVY+FG++L EL+TG++
Sbjct: 167 ----------SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 207
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 97/231 (41%), Gaps = 42/231 (18%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
+G+ +YK A+ + + + + + F+ +V V+ K H N++ G Y
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YST 79
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ I+ + SL Y + + IA+ A+G+ +LH K +H +L
Sbjct: 80 KPQLAIVTQWCEGSSL----YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 135
Query: 603 KPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXX 662
K N+ L D+ KIGDFGL T S+ GS + F+ L
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLA------TVKSRWSGSHQ-------------FEQL----- 171
Query: 663 XXXXXXXXXXXXXXXYHAPESLRSIKPNP---KWDVYSFGVILLELLTGKV 710
+ APE +R NP + DVY+FG++L EL+TG++
Sbjct: 172 ----------SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 212
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 96/211 (45%), Gaps = 39/211 (18%)
Query: 499 GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG--VDEKLIIYDFVPNG 556
G +AV+++ + D+ RDF+ +++++ L +V+ RG +G E ++ +++P+G
Sbjct: 36 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSG 95
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
L + R L L + + +G+ +L ++ VH +L RN+L+ ++ K
Sbjct: 96 CLRDFLQRHRA----RLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVK 151
Query: 617 IGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXX 676
I DFGL +L+ D K R+ Q
Sbjct: 152 IADFGLAKLLPLD---------------KDXXVVREPGQS------------------PI 178
Query: 677 XYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
++APESL + + DV+SFGV+L EL T
Sbjct: 179 FWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Query: 67 NGVTCASPGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDXXXXXXXXXXXXXXX 126
NG T P +N S ++ L L + L G+IP+ LG + L+ L
Sbjct: 401 NGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELM 460
Query: 127 XXXQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKN 186
L L L N ++G +P + + NL ++LS+N L G++P + L++L I+ L N
Sbjct: 461 YVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSN 520
Query: 187 NYFSDGLPSKFN---SVQVLDLSSNLINGSLP 215
N FS +P++ S+ LDL++NL NG++P
Sbjct: 521 NSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 552
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 87/170 (51%), Gaps = 16/170 (9%)
Query: 131 LRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFS 190
L++LD+S N +SG + + L+LLN+S N G +P L+SL +SL N F+
Sbjct: 222 LQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFT 279
Query: 191 ----DGLPSKFNSVQVLDLSSNLINGSLPPDIGGYSLRYLNLSY-NRLSGEIPPQFGEKI 245
D L +++ LDLS N G++PP G SL N SGE+P K+
Sbjct: 280 GEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKM 339
Query: 246 PVNATIDLSFNNLTGEIPE-------SNVFMNQESSSFSGNL--DLCGQP 286
+DLSFN +GE+PE S + ++ S++FSG + +LC P
Sbjct: 340 RGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNP 389
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 87/187 (46%), Gaps = 38/187 (20%)
Query: 131 LRNLDLSNNLISGHLPETMGSL---------------------------HNLQLLNLSDN 163
L+ LDLS N SG LPE++ +L + LQ L L +N
Sbjct: 342 LKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNN 401
Query: 164 ALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKFNS---VQVLDLSSNLINGSLPPDIGG 220
GK+P +L+ L + L NY S +PS S ++ L L N++ G +P ++
Sbjct: 402 GFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMY 461
Query: 221 Y-SLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIP------ESNVFMNQES 273
+L L L +N L+GEIP +N I LS N LTGEIP E+ + +
Sbjct: 462 VKTLETLILDFNDLTGEIPSGLSNCTNLNW-ISLSNNRLTGEIPKWIGRLENLAILKLSN 520
Query: 274 SSFSGNL 280
+SFSGN+
Sbjct: 521 NSFSGNI 527
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 74/137 (54%), Gaps = 5/137 (3%)
Query: 131 LRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFS 190
L+ L L NN +G +P T+ + L L+LS N L+G +P SL +L L + L N
Sbjct: 393 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 452
Query: 191 DGLPSKFNSVQVLD---LSSNLINGSLPPDIGGYS-LRYLNLSYNRLSGEIPPQFGEKIP 246
+P + V+ L+ L N + G +P + + L +++LS NRL+GEIP G ++
Sbjct: 453 GEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIG-RLE 511
Query: 247 VNATIDLSFNNLTGEIP 263
A + LS N+ +G IP
Sbjct: 512 NLAILKLSNNSFSGNIP 528
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 106/251 (42%), Gaps = 53/251 (21%)
Query: 65 SWNGVTCASPGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDXXXXXXXXXXXXX 124
S+N ++ P + S++ L L + L G IP +L ++ L+ L
Sbjct: 423 SFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSG 482
Query: 125 XXXXXQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSL 184
L + LSNN ++G +P+ +G L NL +L LS+N+ +G +P L +SL + L
Sbjct: 483 LSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDL 542
Query: 185 KNNYFSDGLPSKFNSVQVLDLSSNLINGSL------------------------------ 214
N F+ +P+ Q +++N I G
Sbjct: 543 NTNLFNGTIPAAMFK-QSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQL 601
Query: 215 -------PPDI-----GGY---------SLRYLNLSYNRLSGEIPPQFGEKIPVNATIDL 253
P +I GG+ S+ +L++SYN LSG IP + G +P ++L
Sbjct: 602 NRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGS-MPYLFILNL 660
Query: 254 SFNNLTGEIPE 264
N+++G IP+
Sbjct: 661 GHNDISGSIPD 671
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 106/271 (39%), Gaps = 51/271 (18%)
Query: 66 WNGVTCASPGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDXXXXXXXXXXXXXX 125
+N +T P +N + + ++L N++L G IP +G +E L L
Sbjct: 472 FNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 531
Query: 126 XXXXQLRNLDLSNNLISGHLPETM--------------------------------GSLH 153
L LDL+ NL +G +P M G+L
Sbjct: 532 GDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLL 591
Query: 154 NLQLL--------------NLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKFNS 199
Q + N++ G + S+ + + N S +P + S
Sbjct: 592 EFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGS 651
Query: 200 VQ---VLDLSSNLINGSLPPDIGGY-SLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSF 255
+ +L+L N I+GS+P ++G L L+LS N+L G IP Q + + IDLS
Sbjct: 652 MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIP-QAMSALTMLTEIDLSN 710
Query: 256 NNLTGEIPESNVFMNQESSSFSGNLDLCGQP 286
NNL+G IPE F + F N LCG P
Sbjct: 711 NNLSGPIPEMGQFETFPPAKFLNNPGLCGYP 741
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 32/139 (23%)
Query: 61 ENPCS-----WNGVTCASPGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDXXXX 115
NPC+ + G T SP NN S + L + + L G IP ++G + +L L+
Sbjct: 607 RNPCNITSRVYGGHT--SPTFDNNGSMMF-LDMSYNMLSGYIPKEIGSMPYLFILN---- 659
Query: 116 XXXXXXXXXXXXXXQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTT 175
L +N ISG +P+ +G L L +L+LS N L G++P +++
Sbjct: 660 --------------------LGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSA 699
Query: 176 LQSLTIVSLKNNYFSDGLP 194
L LT + L NN S +P
Sbjct: 700 LTMLTEIDLSNNNLSGPIP 718
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 107/245 (43%), Gaps = 63/245 (25%)
Query: 38 LLSFKYSVLSDPLGVLGSWNYNDENPCSWNGVTCASPGEGNNDSRVIGLALPNSQLLGSI 97
L+SFK VL D +L W+ N +NPC+++GVTC D +V + L S
Sbjct: 14 LISFK-DVLPDK-NLLPDWSSN-KNPCTFDGVTC-------RDDKVTSIDL------SSK 57
Query: 98 PADLGMIEFLQYLDXX--------XXXXXXXXXXXXXXXXQLRNLDLSNNLISGHLPE-- 147
P ++G L L +LDLS N +SG +
Sbjct: 58 PLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLT 117
Query: 148 TMGSLHNLQLLNLSDNAL--AGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKFNSVQVLDL 205
++GS L+ LN+S N L GK+ S GL K NS++VLDL
Sbjct: 118 SLGSCSGLKFLNVSSNTLDFPGKV--------------------SGGL--KLNSLEVLDL 155
Query: 206 SSNLINGSLPPDIGGY-------SLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNL 258
S+N I+G+ ++ G+ L++L +S N++SG++ + +D+S NN
Sbjct: 156 SANSISGA---NVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEF---LDVSSNNF 209
Query: 259 TGEIP 263
+ IP
Sbjct: 210 STGIP 214
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%)
Query: 65 SWNGVTCASPGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDXXXXXXXXXXXXX 124
S+N ++ P E + + L L ++ + GSIP ++G + L LD
Sbjct: 637 SYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQA 696
Query: 125 XXXXXQLRNLDLSNNLISGHLPE 147
L +DLSNN +SG +PE
Sbjct: 697 MSALTMLTEIDLSNNNLSGPIPE 719
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 116/305 (38%), Gaps = 67/305 (21%)
Query: 497 EDGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555
E T +AV+ + E S D DF+ + ++A+ +PN+V++ G ++++++
Sbjct: 75 EPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAY 134
Query: 556 GSL-------------------ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKK 596
G L + R R P L +L IA+ VA G+A+L E+K
Sbjct: 135 GDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK 194
Query: 597 HVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQD 656
VH +L RN L+G +M KI DFGL R + G A
Sbjct: 195 FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDA----------------- 237
Query: 657 LXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDEL 716
+ PES+ + + DV+++GV+L E+ + + +
Sbjct: 238 -----------------IPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 280
Query: 717 GQGNGL-LVEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775
+ V D N E L + L C S LP RPS +
Sbjct: 281 AHEEVIYYVRDGN------------ILACPENCPLELYNLMRLCWSKLPADRPSFCSIHR 328
Query: 776 ALEKI 780
L+++
Sbjct: 329 ILQRM 333
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 97/231 (41%), Gaps = 42/231 (18%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
+G+ +YK A+ + + + + + F+ +V V+ K H N++ G Y
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YST 76
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ I+ + SL Y + + IA+ A+G+ +LH K +H +L
Sbjct: 77 KPQLAIVTQWCEGSSL----YHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 132
Query: 603 KPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXX 662
K N+ L D+ KIGDFGL T S+ GS + F+ L
Sbjct: 133 KSNNIFLHEDLTVKIGDFGLA------TVKSRWSGSHQ-------------FEQL----- 168
Query: 663 XXXXXXXXXXXXXXXYHAPESLRSIKPNP---KWDVYSFGVILLELLTGKV 710
+ APE +R NP + DVY+FG++L EL+TG++
Sbjct: 169 ----------SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQL 209
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Query: 67 NGVTCASPGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDXXXXXXXXXXXXXXX 126
NG T P +N S ++ L L + L G+IP+ LG + L+ L
Sbjct: 404 NGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELM 463
Query: 127 XXXQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKN 186
L L L N ++G +P + + NL ++LS+N L G++P + L++L I+ L N
Sbjct: 464 YVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSN 523
Query: 187 NYFSDGLPSKFN---SVQVLDLSSNLINGSLP 215
N FS +P++ S+ LDL++NL NG++P
Sbjct: 524 NSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 555
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 87/170 (51%), Gaps = 16/170 (9%)
Query: 131 LRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFS 190
L++LD+S N +SG + + L+LLN+S N G +P L+SL +SL N F+
Sbjct: 225 LQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFT 282
Query: 191 ----DGLPSKFNSVQVLDLSSNLINGSLPPDIGGYSLRYLNLSY-NRLSGEIPPQFGEKI 245
D L +++ LDLS N G++PP G SL N SGE+P K+
Sbjct: 283 GEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKM 342
Query: 246 PVNATIDLSFNNLTGEIPE-------SNVFMNQESSSFSGNL--DLCGQP 286
+DLSFN +GE+PE S + ++ S++FSG + +LC P
Sbjct: 343 RGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNP 392
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 87/187 (46%), Gaps = 38/187 (20%)
Query: 131 LRNLDLSNNLISGHLPETMGSL---------------------------HNLQLLNLSDN 163
L+ LDLS N SG LPE++ +L + LQ L L +N
Sbjct: 345 LKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNN 404
Query: 164 ALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKFNS---VQVLDLSSNLINGSLPPDIGG 220
GK+P +L+ L + L NY S +PS S ++ L L N++ G +P ++
Sbjct: 405 GFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMY 464
Query: 221 Y-SLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIP------ESNVFMNQES 273
+L L L +N L+GEIP +N I LS N LTGEIP E+ + +
Sbjct: 465 VKTLETLILDFNDLTGEIPSGLSNCTNLNW-ISLSNNRLTGEIPKWIGRLENLAILKLSN 523
Query: 274 SSFSGNL 280
+SFSGN+
Sbjct: 524 NSFSGNI 530
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 74/137 (54%), Gaps = 5/137 (3%)
Query: 131 LRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFS 190
L+ L L NN +G +P T+ + L L+LS N L+G +P SL +L L + L N
Sbjct: 396 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 455
Query: 191 DGLPSKFNSVQVLD---LSSNLINGSLPPDIGGYS-LRYLNLSYNRLSGEIPPQFGEKIP 246
+P + V+ L+ L N + G +P + + L +++LS NRL+GEIP G ++
Sbjct: 456 GEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIG-RLE 514
Query: 247 VNATIDLSFNNLTGEIP 263
A + LS N+ +G IP
Sbjct: 515 NLAILKLSNNSFSGNIP 531
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 106/251 (42%), Gaps = 53/251 (21%)
Query: 65 SWNGVTCASPGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDXXXXXXXXXXXXX 124
S+N ++ P + S++ L L + L G IP +L ++ L+ L
Sbjct: 426 SFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSG 485
Query: 125 XXXXXQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSL 184
L + LSNN ++G +P+ +G L NL +L LS+N+ +G +P L +SL + L
Sbjct: 486 LSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDL 545
Query: 185 KNNYFSDGLPSKFNSVQVLDLSSNLINGSL------------------------------ 214
N F+ +P+ Q +++N I G
Sbjct: 546 NTNLFNGTIPAAMFK-QSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQL 604
Query: 215 -------PPDI-----GGY---------SLRYLNLSYNRLSGEIPPQFGEKIPVNATIDL 253
P +I GG+ S+ +L++SYN LSG IP + G +P ++L
Sbjct: 605 NRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGS-MPYLFILNL 663
Query: 254 SFNNLTGEIPE 264
N+++G IP+
Sbjct: 664 GHNDISGSIPD 674
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 106/271 (39%), Gaps = 51/271 (18%)
Query: 66 WNGVTCASPGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDXXXXXXXXXXXXXX 125
+N +T P +N + + ++L N++L G IP +G +E L L
Sbjct: 475 FNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 534
Query: 126 XXXXQLRNLDLSNNLISGHLPETM--------------------------------GSLH 153
L LDL+ NL +G +P M G+L
Sbjct: 535 GDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLL 594
Query: 154 NLQLL--------------NLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKFNS 199
Q + N++ G + S+ + + N S +P + S
Sbjct: 595 EFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGS 654
Query: 200 VQ---VLDLSSNLINGSLPPDIGGY-SLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSF 255
+ +L+L N I+GS+P ++G L L+LS N+L G IP Q + + IDLS
Sbjct: 655 MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIP-QAMSALTMLTEIDLSN 713
Query: 256 NNLTGEIPESNVFMNQESSSFSGNLDLCGQP 286
NNL+G IPE F + F N LCG P
Sbjct: 714 NNLSGPIPEMGQFETFPPAKFLNNPGLCGYP 744
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 32/139 (23%)
Query: 61 ENPCS-----WNGVTCASPGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDXXXX 115
NPC+ + G T SP NN S + L + + L G IP ++G + +L L+
Sbjct: 610 RNPCNITSRVYGGHT--SPTFDNNGSMMF-LDMSYNMLSGYIPKEIGSMPYLFILN---- 662
Query: 116 XXXXXXXXXXXXXXQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTT 175
L +N ISG +P+ +G L L +L+LS N L G++P +++
Sbjct: 663 --------------------LGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSA 702
Query: 176 LQSLTIVSLKNNYFSDGLP 194
L LT + L NN S +P
Sbjct: 703 LTMLTEIDLSNNNLSGPIP 721
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 107/245 (43%), Gaps = 63/245 (25%)
Query: 38 LLSFKYSVLSDPLGVLGSWNYNDENPCSWNGVTCASPGEGNNDSRVIGLALPNSQLLGSI 97
L+SFK VL D +L W+ N +NPC+++GVTC D +V + L S
Sbjct: 17 LISFK-DVLPDK-NLLPDWSSN-KNPCTFDGVTC-------RDDKVTSIDL------SSK 60
Query: 98 PADLGMIEFLQYLDXX--------XXXXXXXXXXXXXXXXQLRNLDLSNNLISGHLPE-- 147
P ++G L L +LDLS N +SG +
Sbjct: 61 PLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLT 120
Query: 148 TMGSLHNLQLLNLSDNAL--AGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKFNSVQVLDL 205
++GS L+ LN+S N L GK+ S GL K NS++VLDL
Sbjct: 121 SLGSCSGLKFLNVSSNTLDFPGKV--------------------SGGL--KLNSLEVLDL 158
Query: 206 SSNLINGSLPPDIGGY-------SLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNL 258
S+N I+G+ ++ G+ L++L +S N++SG++ + +D+S NN
Sbjct: 159 SANSISGA---NVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEF---LDVSSNNF 212
Query: 259 TGEIP 263
+ IP
Sbjct: 213 STGIP 217
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%)
Query: 65 SWNGVTCASPGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDXXXXXXXXXXXXX 124
S+N ++ P E + + L L ++ + GSIP ++G + L LD
Sbjct: 640 SYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQA 699
Query: 125 XXXXXQLRNLDLSNNLISGHLPE 147
L +DLSNN +SG +PE
Sbjct: 700 MSALTMLTEIDLSNNNLSGPIPE 722
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 44/213 (20%)
Query: 499 GTALAVRRIGENSVDRFRD-FETQVRVIAKLVHPNLVRIRGFY--WGVDEKLIIYDFVPN 555
G +AV+ + ++ + R ++ ++ ++ L H ++++ +G G ++ ++VP
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPL 119
Query: 556 GSLANARYRKMGSSPCHLPWEARLKI-AKGVARGLAFLHEKKHVHGNLKPRNVLLGNDME 614
GSL + P H A+L + A+ + G+A+LH + ++H +L RNVLL ND
Sbjct: 120 GSLRD-------YLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRL 172
Query: 615 PKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXX 674
KIGDFGL + V + R F
Sbjct: 173 VKIGDFGLAKAVPEGHEXYRV----------REDGDSPVF-------------------- 202
Query: 675 XXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
++APE L+ K DV+SFGV L ELLT
Sbjct: 203 ---WYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 44/227 (19%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
LGA ++ T +AV+ + + S+ F + ++ +L H LVR+ Y
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRL---YAV 72
Query: 543 VDEK--LIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHG 600
V ++ II +++ NGSL + + K S L L +A +A G+AF+ E+ ++H
Sbjct: 73 VTQEPIYIITEYMENGSLVD--FLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYIHR 129
Query: 601 NLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXX 660
NL+ N+L+ + + KI DFGL RL+ + +++ G F K
Sbjct: 130 NLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA---KFPIK--------------- 171
Query: 661 XXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ APE++ K DV+SFG++L E++T
Sbjct: 172 -----------------WTAPEAINYGTFTIKSDVWSFGILLTEIVT 201
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 97/211 (45%), Gaps = 38/211 (18%)
Query: 497 EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556
E A+ ++G R RDF + ++ + HPN++R+ G +I+ +++ NG
Sbjct: 44 EISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 102
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
SL ++ RK + + L+ G+A G+ +L + +VH +L RN+L+ +++ K
Sbjct: 103 SL-DSFLRKHDAQFTVIQLVGMLR---GIASGMKYLSDMGYVHRDLAARNILINSNLVCK 158
Query: 617 IGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXX 676
+ DFGL R++ D +A + R G K
Sbjct: 159 VSDFGLSRVLEDD---PEAAYTTR--GGK----------------------------IPI 185
Query: 677 XYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ +PE++ K DV+S+G++L E+++
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 97/211 (45%), Gaps = 38/211 (18%)
Query: 497 EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556
E A+ ++G R RDF + ++ + HPN++R+ G +I+ +++ NG
Sbjct: 61 EISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 119
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
SL ++ RK + + L+ G+A G+ +L + +VH +L RN+L+ +++ K
Sbjct: 120 SL-DSFLRKHDAQFTVIQLVGMLR---GIASGMKYLSDMGYVHRDLAARNILINSNLVCK 175
Query: 617 IGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXX 676
+ DFGL R++ D +A + R G K
Sbjct: 176 VSDFGLSRVLEDD---PEAAYTTR--GGK----------------------------IPI 202
Query: 677 XYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ +PE++ K DV+S+G++L E+++
Sbjct: 203 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 94/211 (44%), Gaps = 38/211 (18%)
Query: 497 EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556
E A+ ++G R RDF + ++ + HPN++R+ G +I+ +++ NG
Sbjct: 73 EISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
SL ++ RK + + L+ G+A G+ +L + +VH +L RN+L+ +++ K
Sbjct: 132 SL-DSFLRKHDAQFTVIQLVGMLR---GIASGMKYLSDMGYVHRDLAARNILINSNLVCK 187
Query: 617 IGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXX 676
+ DFGL R++ D ++ +
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGK---------------------------------IPI 214
Query: 677 XYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ +PE++ K DV+S+G++L E+++
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 94/211 (44%), Gaps = 38/211 (18%)
Query: 497 EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556
E A+ ++G R RDF + ++ + HPN++R+ G +I+ +++ NG
Sbjct: 73 EISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
SL ++ RK + + L+ G+A G+ +L + +VH +L RN+L+ +++ K
Sbjct: 132 SL-DSFLRKHDAQFTVIQLVGMLR---GIASGMKYLSDMGYVHRDLAARNILINSNLVCK 187
Query: 617 IGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXX 676
+ DFGL R++ D ++ +
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGK---------------------------------IPI 214
Query: 677 XYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ +PE++ K DV+S+G++L E+++
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 96/223 (43%), Gaps = 47/223 (21%)
Query: 497 EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556
+D +AV+ + + ++ +DF+ + ++ L H ++V+ G D +++++++ +G
Sbjct: 43 KDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHG 102
Query: 557 SLANARYRKMGSSPCHL----PWEAR--------LKIAKGVARGLAFLHEKKHVHGNLKP 604
L N R G L P +A+ L IA +A G+ +L + VH +L
Sbjct: 103 DL-NKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLAT 161
Query: 605 RNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXX 664
RN L+G ++ KIGDFG+ R V T + GG
Sbjct: 162 RNCLVGANLLVKIGDFGMSRDVY-STDYYRVGGHT------------------------- 195
Query: 665 XXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ PES+ K + DV+SFGVIL E+ T
Sbjct: 196 --------MLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 94/211 (44%), Gaps = 38/211 (18%)
Query: 497 EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556
E A+ ++G R RDF + ++ + HPN++R+ G +I+ +++ NG
Sbjct: 73 EISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
SL ++ RK + + L+ G+A G+ +L + +VH +L RN+L+ +++ K
Sbjct: 132 SL-DSFLRKHDAQFTVIQLVGMLR---GIASGMKYLSDMGYVHRDLAARNILINSNLVCK 187
Query: 617 IGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXX 676
+ DFGL R++ D ++ +
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGK---------------------------------IPI 214
Query: 677 XYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ +PE++ K DV+S+G++L E+++
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 94/211 (44%), Gaps = 38/211 (18%)
Query: 497 EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556
E A+ ++G R RDF + ++ + HPN++R+ G +I+ +++ NG
Sbjct: 73 EISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
SL ++ RK + + L+ G+A G+ +L + +VH +L RN+L+ +++ K
Sbjct: 132 SL-DSFLRKHDAQFTVIQLVGMLR---GIASGMKYLSDMGYVHRDLAARNILINSNLVCK 187
Query: 617 IGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXX 676
+ DFGL R++ D ++ +
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGK---------------------------------IPI 214
Query: 677 XYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ +PE++ K DV+S+G++L E+++
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 97/211 (45%), Gaps = 38/211 (18%)
Query: 497 EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556
E A+ ++G R RDF + ++ + HPN++R+ G +I+ +++ NG
Sbjct: 71 EISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 129
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
SL ++ RK + + L+ G+A G+ +L + +VH +L RN+L+ +++ K
Sbjct: 130 SL-DSFLRKHDAQFTVIQLVGMLR---GIASGMKYLSDMGYVHRDLAARNILINSNLVCK 185
Query: 617 IGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXX 676
+ DFGL R++ D +A + R G K
Sbjct: 186 VSDFGLSRVLEDD---PEAAYTTR--GGK----------------------------IPI 212
Query: 677 XYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ +PE++ K DV+S+G++L E+++
Sbjct: 213 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 94/211 (44%), Gaps = 38/211 (18%)
Query: 497 EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556
E A+ ++G R RDF + ++ + HPN++R+ G +I+ +++ NG
Sbjct: 73 EISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
SL ++ RK + + L+ G+A G+ +L + +VH +L RN+L+ +++ K
Sbjct: 132 SL-DSFLRKHDAQFTVIQLVGMLR---GIASGMKYLSDMGYVHRDLAARNILINSNLVCK 187
Query: 617 IGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXX 676
+ DFGL R++ D ++ +
Sbjct: 188 VSDFGLARVLEDDPEAAYTTRGGK---------------------------------IPI 214
Query: 677 XYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ +PE++ K DV+S+G++L E+++
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 40/225 (17%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
LGA + ++ T +AV+ + + S+ F + ++ +L H LVR+
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVV-T 78
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ II +++ NGSL + + K S L L +A +A G+AF+ E+ ++H +L
Sbjct: 79 QEPIYIITEYMENGSLVD--FLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 135
Query: 603 KPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXX 662
+ N+L+ + + KI DFGL RL+ +++ G F K
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDAEXTAREGA---KFPIK----------------- 175
Query: 663 XXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ APE++ K DV+SFG++L E++T
Sbjct: 176 ---------------WTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 40/225 (17%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
LGA ++ T +AV+ + + S+ F + ++ +L H LVR+
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVV-T 86
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ II +++ NGSL + + K S L L +A +A G+AF+ E+ ++H +L
Sbjct: 87 QEPIYIITEYMENGSLVD--FLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 143
Query: 603 KPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXX 662
+ N+L+ + + KI DFGL RL+ + +++ G F K
Sbjct: 144 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGA---KFPIK----------------- 183
Query: 663 XXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ APE++ K DV+SFG++L E++T
Sbjct: 184 ---------------WTAPEAINYGTFTIKSDVWSFGILLTEIVT 213
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 40/225 (17%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
LGA ++ T +AV+ + + S+ F + ++ +L H LVR+
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVV-T 84
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ II +++ NGSL + + K S L L +A +A G+AF+ E+ ++H +L
Sbjct: 85 QEPIYIITEYMENGSLVD--FLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 141
Query: 603 KPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXX 662
+ N+L+ + + KI DFGL RL+ + +++ G F K
Sbjct: 142 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGA---KFPIK----------------- 181
Query: 663 XXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ APE++ K DV+SFG++L E++T
Sbjct: 182 ---------------WTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 40/225 (17%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
LGA ++ T +AV+ + + S+ F + ++ +L H LVR+
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVV-T 87
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ II +++ NGSL + + K S L L +A +A G+AF+ E+ ++H +L
Sbjct: 88 QEPIYIITEYMENGSLVD--FLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 144
Query: 603 KPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXX 662
+ N+L+ + + KI DFGL RL+ + +++ G F K
Sbjct: 145 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGA---KFPIK----------------- 184
Query: 663 XXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ APE++ K DV+SFG++L E++T
Sbjct: 185 ---------------WTAPEAINYGTFTIKSDVWSFGILLTEIVT 214
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 102/233 (43%), Gaps = 45/233 (19%)
Query: 482 ILGASGSSIMYKAVLEDGTA-----LAVRRIGENSVDRFR-DFETQVRVIAKLVHPNLVR 535
++GA +YK +L+ + +A++ + ++ R DF + ++ + H N++R
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR 110
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGS-SPCHLPWEARLKIAKGVARGLAFLHE 594
+ G +II +++ NG+L K G S L + + +G+A G+ +L
Sbjct: 111 LEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQL-----VGMLRGIAAGMKYLAN 165
Query: 595 KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSF 654
+VH +L RN+L+ +++ K+ DFGL R++ D ++ +
Sbjct: 166 MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGK-------------- 211
Query: 655 QDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ APE++ K DV+SFG+++ E++T
Sbjct: 212 -------------------IPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 80/154 (51%), Gaps = 21/154 (13%)
Query: 489 SIMYKAVLEDGTAL--AVRRIGE-NSVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVD 544
++ + +DG + A++R+ E S D RDF ++ V+ KL HPN++ + G +
Sbjct: 37 QVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLG---ACE 93
Query: 545 EKLIIY---DFVPNGSLAN--ARYRKMGSSPCH---------LPWEARLKIAKGVARGLA 590
+ +Y ++ P+G+L + + R + + P L + L A VARG+
Sbjct: 94 HRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMD 153
Query: 591 FLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
+L +K+ +H NL RN+L+G + KI DFGL R
Sbjct: 154 YLSQKQFIHRNLAARNILVGENYVAKIADFGLSR 187
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 40/225 (17%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
LGA ++ T +AV+ + + S+ F + ++ +L H LVR+
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVV-T 79
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ II +++ NGSL + + K S L L +A +A G+AF+ E+ ++H +L
Sbjct: 80 QEPIYIITEYMENGSLVD--FLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 136
Query: 603 KPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXX 662
+ N+L+ + + KI DFGL RL+ + +++ G F K
Sbjct: 137 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGA---KFPIK----------------- 176
Query: 663 XXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ APE++ K DV+SFG++L E++T
Sbjct: 177 ---------------WTAPEAINYGTFTIKSDVWSFGILLTEIVT 206
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 44/227 (19%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
LGA ++ T +AV+ + + S+ F + ++ +L H LVR+ Y
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRL---YAV 71
Query: 543 VDEK--LIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHG 600
V ++ II +++ NGSL + + K S L L +A +A G+AF+ E+ ++H
Sbjct: 72 VTQEPIYIITEYMENGSLVD--FLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYIHR 128
Query: 601 NLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXX 660
+L+ N+L+ + + KI DFGL RL+ + +++ G F K
Sbjct: 129 DLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGA---KFPIK--------------- 170
Query: 661 XXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ APE++ K DV+SFG++L E++T
Sbjct: 171 -----------------WTAPEAINYGTFTIKSDVWSFGILLTEIVT 200
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 40/225 (17%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
LGA ++ T +AV+ + + S+ F + ++ +L H LVR+
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVV-T 80
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ II +++ NGSL + + K S L L +A +A G+AF+ E+ ++H +L
Sbjct: 81 QEPIYIITEYMENGSLVD--FLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 137
Query: 603 KPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXX 662
+ N+L+ + + KI DFGL RL+ + +++ G F K
Sbjct: 138 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGA---KFPIK----------------- 177
Query: 663 XXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ APE++ K DV+SFG++L E++T
Sbjct: 178 ---------------WTAPEAINYGTFTIKSDVWSFGILLTEIVT 207
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 40/225 (17%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
LGA ++ T +AV+ + + S+ F + ++ +L H LVR+
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVV-T 78
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ II +++ NGSL + + K S L L +A +A G+AF+ E+ ++H +L
Sbjct: 79 QEPIYIITEYMENGSLVD--FLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 135
Query: 603 KPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXX 662
+ N+L+ + + KI DFGL RL+ + +++ G F K
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGA---KFPIK----------------- 175
Query: 663 XXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ APE++ K DV+SFG++L E++T
Sbjct: 176 ---------------WTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 40/225 (17%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
LGA ++ T +AV+ + + S+ F + ++ +L H LVR+
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVV-T 78
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ II +++ NGSL + + K S L L +A +A G+AF+ E+ ++H +L
Sbjct: 79 QEPIYIITEYMENGSLVD--FLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 135
Query: 603 KPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXX 662
+ N+L+ + + KI DFGL RL+ + +++ G F K
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGA---KFPIK----------------- 175
Query: 663 XXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ APE++ K DV+SFG++L E++T
Sbjct: 176 ---------------WTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 40/225 (17%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
LGA ++ T +AV+ + + S+ F + ++ +L H LVR+
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVV-T 88
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ II +++ NGSL + + K S L L +A +A G+AF+ E+ ++H +L
Sbjct: 89 QEPIYIITEYMENGSLVD--FLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 145
Query: 603 KPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXX 662
+ N+L+ + + KI DFGL RL+ + +++ G F K
Sbjct: 146 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGA---KFPIK----------------- 185
Query: 663 XXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ APE++ K DV+SFG++L E++T
Sbjct: 186 ---------------WTAPEAINYGTFTIKSDVWSFGILLTEIVT 215
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 40/225 (17%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
LGA ++ T +AV+ + + S+ F + ++ +L H LVR+
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVV-T 84
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ II +++ NGSL + + K S L L +A +A G+AF+ E+ ++H +L
Sbjct: 85 QEPIYIITEYMENGSLVD--FLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 141
Query: 603 KPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXX 662
+ N+L+ + + KI DFGL RL+ + +++ G F K
Sbjct: 142 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGA---KFPIK----------------- 181
Query: 663 XXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ APE++ K DV+SFG++L E++T
Sbjct: 182 ---------------WTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 40/225 (17%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
LGA ++ T +AV+ + + S+ F + ++ +L H LVR+
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVV-T 83
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ II +++ NGSL + + K S L L +A +A G+AF+ E+ ++H +L
Sbjct: 84 QEPIYIITEYMENGSLVD--FLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 140
Query: 603 KPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXX 662
+ N+L+ + + KI DFGL RL+ + +++ G F K
Sbjct: 141 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGA---KFPIK----------------- 180
Query: 663 XXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ APE++ K DV+SFG++L E++T
Sbjct: 181 ---------------WTAPEAINYGTFTIKSDVWSFGILLTEIVT 210
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 94/211 (44%), Gaps = 38/211 (18%)
Query: 497 EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556
E A+ ++G R RDF + ++ + HPN++R+ G +I+ +++ NG
Sbjct: 73 EISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
SL ++ RK + + L+ G+A G+ +L + +VH +L RN+L+ +++ K
Sbjct: 132 SL-DSFLRKHDAQFTVIQLVGMLR---GIASGMKYLSDMGYVHRDLAARNILINSNLVCK 187
Query: 617 IGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXX 676
+ DFGL R++ D ++ +
Sbjct: 188 VSDFGLGRVLEDDPEAAYTTRGGK---------------------------------IPI 214
Query: 677 XYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ +PE++ K DV+S+G++L E+++
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 93/211 (44%), Gaps = 42/211 (19%)
Query: 499 GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558
A+ ++G R RDF + ++ + HPN+V + G +I+ +F+ NG+L
Sbjct: 73 AVAIKTLKVGYTEKQR-RDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGAL 131
Query: 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIG 618
+A RK + L+ G+A G+ +L + +VH +L RN+L+ +++ K+
Sbjct: 132 -DAFLRKHDGQFTVIQLVGMLR---GIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVS 187
Query: 619 DFGLERLVTGDTSS--SKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXX 676
DFGL R++ D + + GG
Sbjct: 188 DFGLSRVIEDDPEAVYTTTGGKI-----------------------------------PV 212
Query: 677 XYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ APE+++ K DV+S+G+++ E+++
Sbjct: 213 RWTAPEAIQYRKFTSASDVWSYGIVMWEVMS 243
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 40/225 (17%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
LGA ++ T +AV+ + + S+ F + ++ +L H LVR+
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP-DAFLAEANLMKQLQHQRLVRLYAVV-T 78
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ II +++ NGSL + + K S L L +A +A G+AF+ E+ ++H +L
Sbjct: 79 QEPIYIITEYMENGSLVD--FLKTPSG-IKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 135
Query: 603 KPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXX 662
+ N+L+ + + KI DFGL RL+ + +++ G F K
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGA---KFPIK----------------- 175
Query: 663 XXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ APE++ K DV+SFG++L E++T
Sbjct: 176 ---------------WTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 93/211 (44%), Gaps = 38/211 (18%)
Query: 497 EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556
E A+ ++G R RDF + ++ + HPN++R+ G +I+ +++ NG
Sbjct: 73 EISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENG 131
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
SL ++ RK + + L+ G+A G+ +L + VH +L RN+L+ +++ K
Sbjct: 132 SL-DSFLRKHDAQFTVIQLVGMLR---GIASGMKYLSDMGFVHRDLAARNILINSNLVCK 187
Query: 617 IGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXX 676
+ DFGL R++ D ++ +
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGK---------------------------------IPI 214
Query: 677 XYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ +PE++ K DV+S+G++L E+++
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 96/211 (45%), Gaps = 38/211 (18%)
Query: 497 EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556
E A+ ++G R RDF + ++ + HPN++R+ G +I+ + + NG
Sbjct: 44 EISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENG 102
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
SL ++ RK + + L+ G+A G+ +L + +VH +L RN+L+ +++ K
Sbjct: 103 SL-DSFLRKHDAQFTVIQLVGMLR---GIASGMKYLSDMGYVHRDLAARNILINSNLVCK 158
Query: 617 IGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXX 676
+ DFGL R++ D +A + R G K
Sbjct: 159 VSDFGLSRVLEDD---PEAAYTTR--GGK----------------------------IPI 185
Query: 677 XYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ +PE++ K DV+S+G++L E+++
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 19/138 (13%)
Query: 503 AVRRIGE-NSVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIY---DFVPNGS 557
A++R+ E S D RDF ++ V+ KL HPN++ + G + + +Y ++ P+G+
Sbjct: 46 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLG---ACEHRGYLYLAIEYAPHGN 102
Query: 558 LAN--ARYRKMGSSPCH---------LPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRN 606
L + + R + + P L + L A VARG+ +L +K+ +H +L RN
Sbjct: 103 LLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARN 162
Query: 607 VLLGNDMEPKIGDFGLER 624
+L+G + KI DFGL R
Sbjct: 163 ILVGENYVAKIADFGLSR 180
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 93/211 (44%), Gaps = 38/211 (18%)
Query: 497 EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556
E A+ ++G R RDF + ++ + HPN++R+ G +I+ + + NG
Sbjct: 73 EISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENG 131
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
SL ++ RK + + L+ G+A G+ +L + +VH +L RN+L+ +++ K
Sbjct: 132 SL-DSFLRKHDAQFTVIQLVGMLR---GIASGMKYLSDMGYVHRDLAARNILINSNLVCK 187
Query: 617 IGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXX 676
+ DFGL R++ D ++ +
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGK---------------------------------IPI 214
Query: 677 XYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ +PE++ K DV+S+G++L E+++
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 19/138 (13%)
Query: 503 AVRRIGE-NSVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIY---DFVPNGS 557
A++R+ E S D RDF ++ V+ KL HPN++ + G + + +Y ++ P+G+
Sbjct: 56 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLG---ACEHRGYLYLAIEYAPHGN 112
Query: 558 LAN--ARYRKMGSSPCH---------LPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRN 606
L + + R + + P L + L A VARG+ +L +K+ +H +L RN
Sbjct: 113 LLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARN 172
Query: 607 VLLGNDMEPKIGDFGLER 624
+L+G + KI DFGL R
Sbjct: 173 ILVGENYVAKIADFGLSR 190
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 119/312 (38%), Gaps = 75/312 (24%)
Query: 497 EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556
+D +AV+ + E S +DF+ + ++ L H ++VR G L++++++ +G
Sbjct: 69 QDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 128
Query: 557 SLANARYRKMGS-----------SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPR 605
L N R G +P L L +A VA G+ +L VH +L R
Sbjct: 129 DL-NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATR 187
Query: 606 NVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXX 665
N L+G + KIGDFG+ R + T + GG R R
Sbjct: 188 NCLVGQGLVVKIGDFGMSRDIY-STDYYRVGG--RTMLPIR------------------- 225
Query: 666 XXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT-GK--------VIVVDEL 716
+ PES+ K + DV+SFGV+L E+ T GK +D +
Sbjct: 226 ------------WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI 273
Query: 717 GQGNGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776
QG L E + + C PQ+R S+K+
Sbjct: 274 TQGREL--------------------ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR 313
Query: 777 LEKIPSSPSPYL 788
L+ + +P YL
Sbjct: 314 LQALAQAPPVYL 325
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 119/312 (38%), Gaps = 75/312 (24%)
Query: 497 EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556
+D +AV+ + E S +DF+ + ++ L H ++VR G L++++++ +G
Sbjct: 46 QDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 105
Query: 557 SLANARYRKMG-----------SSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPR 605
L N R G +P L L +A VA G+ +L VH +L R
Sbjct: 106 DL-NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATR 164
Query: 606 NVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXX 665
N L+G + KIGDFG+ R + T + GG R R
Sbjct: 165 NCLVGQGLVVKIGDFGMSRDIY-STDYYRVGG--RTMLPIR------------------- 202
Query: 666 XXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT-GK--------VIVVDEL 716
+ PES+ K + DV+SFGV+L E+ T GK +D +
Sbjct: 203 ------------WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI 250
Query: 717 GQGNGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776
QG L E + + C PQ+R S+K+
Sbjct: 251 TQGREL--------------------ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR 290
Query: 777 LEKIPSSPSPYL 788
L+ + +P YL
Sbjct: 291 LQALAQAPPVYL 302
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 119/312 (38%), Gaps = 75/312 (24%)
Query: 497 EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556
+D +AV+ + E S +DF+ + ++ L H ++VR G L++++++ +G
Sbjct: 40 QDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG 99
Query: 557 SLANARYRKMG-----------SSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPR 605
L N R G +P L L +A VA G+ +L VH +L R
Sbjct: 100 DL-NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATR 158
Query: 606 NVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXX 665
N L+G + KIGDFG+ R + T + GG R R
Sbjct: 159 NCLVGQGLVVKIGDFGMSRDIY-STDYYRVGG--RTMLPIR------------------- 196
Query: 666 XXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT-GK--------VIVVDEL 716
+ PES+ K + DV+SFGV+L E+ T GK +D +
Sbjct: 197 ------------WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI 244
Query: 717 GQGNGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776
QG L E + + C PQ+R S+K+
Sbjct: 245 TQGREL--------------------ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR 284
Query: 777 LEKIPSSPSPYL 788
L+ + +P YL
Sbjct: 285 LQALAQAPPVYL 296
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 96/225 (42%), Gaps = 40/225 (17%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
LGA ++ A T +AV+ + S+ F + V+ L H LV++
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKLHAVV-T 253
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ II +F+ GSL + GS P + + +A G+AF+ ++ ++H +L
Sbjct: 254 KEPIYIITEFMAKGSLLDFLKSDEGSKQ---PLPKLIDFSAQIAEGMAFIEQRNYIHRDL 310
Query: 603 KPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXX 662
+ N+L+ + KI DFGL R++ + +++ G F K
Sbjct: 311 RAANILVSASLVCKIADFGLARVIEDNEYTAREGA---KFPIK----------------- 350
Query: 663 XXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ APE++ K DV+SFG++L+E++T
Sbjct: 351 ---------------WTAPEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 93/238 (39%), Gaps = 46/238 (19%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
LG +SI+Y+ + ++ + +VD+ + T++ V+ +L HPN+++++ +
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKTVDK-KIVRTEIGVLLRLSHPNIIKLKEIFET 119
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
E ++ + V G L + K S K + +A+LHE VH +L
Sbjct: 120 PTEISLVLELVTGGELFDRIVEKGYYSE-----RDAADAVKQILEAVAYLHENGIVHRDL 174
Query: 603 KPRNVLLGN---DMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXX 659
KP N+L D KI DFGL ++V G+
Sbjct: 175 KPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTP-------------------- 214
Query: 660 XXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELG 717
Y APE LR P+ D++S G+I LL G DE G
Sbjct: 215 -----------------GYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERG 255
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 92/211 (43%), Gaps = 38/211 (18%)
Query: 497 EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556
E A+ ++G R RDF + ++ + HPN++R+ G +I+ + + NG
Sbjct: 73 EISVAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENG 131
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
SL ++ RK + + L+ G+A G+ +L + VH +L RN+L+ +++ K
Sbjct: 132 SL-DSFLRKHDAQFTVIQLVGMLR---GIASGMKYLSDMGAVHRDLAARNILINSNLVCK 187
Query: 617 IGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXX 676
+ DFGL R++ D ++ +
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGK---------------------------------IPI 214
Query: 677 XYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ +PE++ K DV+S+G++L E+++
Sbjct: 215 RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 96/225 (42%), Gaps = 40/225 (17%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
LGA ++ A T +AV+ + S+ F + V+ L H LV++
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKLHAVV-T 80
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ II +F+ GSL + GS P + + +A G+AF+ ++ ++H +L
Sbjct: 81 KEPIYIITEFMAKGSLLDFLKSDEGSKQ---PLPKLIDFSAQIAEGMAFIEQRNYIHRDL 137
Query: 603 KPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXX 662
+ N+L+ + KI DFGL R++ + +++ G F K
Sbjct: 138 RAANILVSASLVCKIADFGLARVIEDNEYTAREGA---KFPIK----------------- 177
Query: 663 XXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ APE++ K DV+SFG++L+E++T
Sbjct: 178 ---------------WTAPEAINFGSFTIKSDVWSFGILLMEIVT 207
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 85/192 (44%), Gaps = 37/192 (19%)
Query: 516 RDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPW 575
RDF ++ ++ + HPN++ + G +II +++ NGSL +A RK +
Sbjct: 60 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQL 118
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635
L+ G+ G+ +L + +VH +L RN+L+ +++ K+ DFG+ R++ D ++
Sbjct: 119 VGMLR---GIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT 175
Query: 636 GGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDV 695
+ + APE++ K DV
Sbjct: 176 TRGGK---------------------------------IPIRWTAPEAIAYRKFTSASDV 202
Query: 696 YSFGVILLELLT 707
+S+G+++ E+++
Sbjct: 203 WSYGIVMWEVMS 214
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 92/208 (44%), Gaps = 38/208 (18%)
Query: 501 ALAVRRIGENSVDR-FRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLA 559
+A++ + D+ RDF ++ ++ + HPN++ + G +II +++ NGSL
Sbjct: 38 CVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL- 96
Query: 560 NARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGD 619
+A RK + L+ G+ G+ +L + +VH +L RN+L+ +++ K+ D
Sbjct: 97 DAFLRKNDGRFTVIQLVGMLR---GIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSD 153
Query: 620 FGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYH 679
FG+ R++ D ++ + +
Sbjct: 154 FGMSRVLEDDPEAAYTTRGGK---------------------------------IPIRWT 180
Query: 680 APESLRSIKPNPKWDVYSFGVILLELLT 707
APE++ K DV+S+G+++ E+++
Sbjct: 181 APEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 87/193 (45%), Gaps = 37/193 (19%)
Query: 516 RDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLP 574
R+F ++ ++ + HPN++R+ G +I+ +F+ NG+L + R + L
Sbjct: 62 REFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQL- 120
Query: 575 WEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634
+ + +G+A G+ +L E +VH +L RN+L+ +++ K+ DFGL R + ++S
Sbjct: 121 ----VGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPT 176
Query: 635 AGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWD 694
S G K + APE++ K D
Sbjct: 177 ETSS---LGGK----------------------------IPIRWTAPEAIAFRKFTSASD 205
Query: 695 VYSFGVILLELLT 707
+S+G+++ E+++
Sbjct: 206 AWSYGIVMWEVMS 218
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 44/196 (22%)
Query: 518 FETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNGSLANARYRKMGSSPCHLPW 575
F + +V+ KL H LV++ Y V E+ I+ +++ GSL + +MG +L
Sbjct: 60 FLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGK---YLRL 113
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635
+ +A +A G+A++ +VH +L+ N+L+G ++ K+ DFGL RL+ + +++
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQ 173
Query: 636 GGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDV 695
G F K + APE+ + K DV
Sbjct: 174 GA---KFPIK--------------------------------WTAPEAALYGRFTIKSDV 198
Query: 696 YSFGVILLELLT-GKV 710
+SFG++L EL T G+V
Sbjct: 199 WSFGILLTELTTKGRV 214
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 37/190 (19%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L H N+VR+ ++ ++++F+ N R +G++P L
Sbjct: 53 EISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKY 112
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSAR 640
+ +GLAF HE K +H +LKP+N+L+ + K+GDFGL AR
Sbjct: 113 FQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGL----------------AR 156
Query: 641 NFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKP-NPKWDVYSFG 699
FG +T S + Y AP+ L + + D++S G
Sbjct: 157 AFGIPVNTFSSE--------------------VVTLWYRAPDVLMGSRTYSTSIDIWSCG 196
Query: 700 VILLELLTGK 709
IL E++TGK
Sbjct: 197 CILAEMITGK 206
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 44/196 (22%)
Query: 518 FETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNGSLANARYRKMGSSPCHLPW 575
F + +V+ KL H LV++ Y V E+ I+ +++ GSL + +MG +L
Sbjct: 60 FLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGK---YLRL 113
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635
+ +A +A G+A++ +VH +L+ N+L+G ++ K+ DFGL RL+ + +++
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 636 GGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDV 695
G F K + APE+ + K DV
Sbjct: 174 GA---KFPIK--------------------------------WTAPEAALYGRFTIKSDV 198
Query: 696 YSFGVILLELLT-GKV 710
+SFG++L EL T G+V
Sbjct: 199 WSFGILLTELTTKGRV 214
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 87/193 (45%), Gaps = 37/193 (19%)
Query: 516 RDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLP 574
R+F ++ ++ + HPN++R+ G +I+ +F+ NG+L + R + L
Sbjct: 60 REFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQL- 118
Query: 575 WEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634
+ + +G+A G+ +L E +VH +L RN+L+ +++ K+ DFGL R + ++S
Sbjct: 119 ----VGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPT 174
Query: 635 AGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWD 694
S G K + APE++ K D
Sbjct: 175 YTSS---LGGK----------------------------IPIRWTAPEAIAFRKFTSASD 203
Query: 695 VYSFGVILLELLT 707
+S+G+++ E+++
Sbjct: 204 AWSYGIVMWEVMS 216
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 118/315 (37%), Gaps = 73/315 (23%)
Query: 482 ILGASGSSIMYKAV-LEDGTALAVRRIG--ENSVDRFRDFETQVRVIAKLVHPNLVRIRG 538
I+G G +Y+A + D A+ R E+ + + ++ A L HPN++ +RG
Sbjct: 14 IIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 539 FYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ +F G L K +P + + A +ARG+ +LH++ V
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVLSGK------RIPPDILVNWAVQIARGMNYLHDEAIV 127
Query: 599 ---HGNLKPRNVLLGNDMEP--------KIGDFGLERLVTGDTSSSKAGGSARNFGSKRS 647
H +LK N+L+ +E KI DFGL R T S AG A
Sbjct: 128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYA-------- 179
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ APE +R+ + DV+S+GV+L ELLT
Sbjct: 180 ------------------------------WMAPEVIRASMFSKGSDVWSYGVLLWELLT 209
Query: 708 GKVIV--VDELGQGNGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSCASPLPQ 765
G+V +D L G+ + N F KL C +P P
Sbjct: 210 GEVPFRGIDGLAVAYGVAM---NKLALPIPSTCPEPFA----------KLMEDCWNPDPH 256
Query: 766 KRPSMKEALQALEKI 780
RPS L L I
Sbjct: 257 SRPSFTNILDQLTTI 271
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 44/196 (22%)
Query: 518 FETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNGSLANARYRKMGSSPCHLPW 575
F + +V+ KL H LV++ Y V E+ I+ +++ GSL + +MG +L
Sbjct: 60 FLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVCEYMSKGSLLDFLKGEMGK---YLRL 113
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635
+ +A +A G+A++ +VH +L+ N+L+G ++ K+ DFGL RL+ + +++
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 636 GGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDV 695
G F K + APE+ + K DV
Sbjct: 174 GA---KFPIK--------------------------------WTAPEAALYGRFTIKSDV 198
Query: 696 YSFGVILLELLT-GKV 710
+SFG++L EL T G+V
Sbjct: 199 WSFGILLTELTTKGRV 214
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 44/196 (22%)
Query: 518 FETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNGSLANARYRKMGSSPCHLPW 575
F + +V+ KL H LV++ Y V E+ I+ +++ GSL + +MG +L
Sbjct: 227 FLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGK---YLRL 280
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635
+ +A +A G+A++ +VH +L+ N+L+G ++ K+ DFGL RL+ + +++
Sbjct: 281 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQ 340
Query: 636 GGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDV 695
G F K + APE+ + K DV
Sbjct: 341 GA---KFPIK--------------------------------WTAPEAALYGRFTIKSDV 365
Query: 696 YSFGVILLELLT-GKV 710
+SFG++L EL T G+V
Sbjct: 366 WSFGILLTELTTKGRV 381
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 44/196 (22%)
Query: 518 FETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNGSLANARYRKMGSSPCHLPW 575
F + +V+ KL H LV++ Y V E+ I+ +++ GSL + +MG +L
Sbjct: 60 FLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGK---YLRL 113
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635
+ +A +A G+A++ +VH +L+ N+L+G ++ K+ DFGL RL+ + +++
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 636 GGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDV 695
G F K + APE+ + K DV
Sbjct: 174 GA---KFPIK--------------------------------WTAPEAALYGRFTIKSDV 198
Query: 696 YSFGVILLELLT-GKV 710
+SFG++L EL T G+V
Sbjct: 199 WSFGILLTELTTKGRV 214
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 44/196 (22%)
Query: 518 FETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNGSLANARYRKMGSSPCHLPW 575
F + +V+ KL H LV++ Y V E+ I+ +++ GSL + +MG +L
Sbjct: 49 FLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGK---YLRL 102
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635
+ +A +A G+A++ +VH +L+ N+L+G ++ K+ DFGL RL+ + +++
Sbjct: 103 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 162
Query: 636 GGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDV 695
G F K + APE+ + K DV
Sbjct: 163 GA---KFPIK--------------------------------WTAPEAALYGRFTIKSDV 187
Query: 696 YSFGVILLELLT-GKV 710
+SFG++L EL T G+V
Sbjct: 188 WSFGILLTELTTKGRV 203
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 44/196 (22%)
Query: 518 FETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNGSLANARYRKMGSSPCHLPW 575
F + +V+ KL H LV++ Y V E+ I+ +++ GSL + +MG +L
Sbjct: 51 FLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGK---YLRL 104
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635
+ +A +A G+A++ +VH +L+ N+L+G ++ K+ DFGL RL+ + +++
Sbjct: 105 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 164
Query: 636 GGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDV 695
G F K + APE+ + K DV
Sbjct: 165 GA---KFPIK--------------------------------WTAPEAALYGRFTIKSDV 189
Query: 696 YSFGVILLELLT-GKV 710
+SFG++L EL T G+V
Sbjct: 190 WSFGILLTELTTKGRV 205
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 110/264 (41%), Gaps = 56/264 (21%)
Query: 457 KKGTLVIVDGDKELELETLLKASAYILGASGSSIMYKAVLED------GTALAVRRIGEN 510
KKG G+ E TLL+ LG ++Y+ D T +AV+ + E+
Sbjct: 2 KKGHHHHHHGEVSREKITLLRE----LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNES 57
Query: 511 SVDRFR-DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKM--- 566
+ R R +F + V+ ++VR+ G L++ + + +G L + R +
Sbjct: 58 ASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL-KSYLRSLRPE 116
Query: 567 -----GSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFG 621
G P L + +++A +A G+A+L+ KK VH +L RN ++ +D KIGDFG
Sbjct: 117 AENNPGRPPPTL--QEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFG 174
Query: 622 LERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAP 681
+ R + +T + GG + AP
Sbjct: 175 MTRDIY-ETDYYRKGGKG---------------------------------LLPVRWMAP 200
Query: 682 ESLRSIKPNPKWDVYSFGVILLEL 705
ESL+ D++SFGV+L E+
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 84/192 (43%), Gaps = 37/192 (19%)
Query: 516 RDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPW 575
RDF ++ ++ + HPN++ + G +II +++ NGSL +A RK +
Sbjct: 75 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQL 133
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635
L+ G+ G+ +L + VH +L RN+L+ +++ K+ DFG+ R++ D ++
Sbjct: 134 VGMLR---GIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT 190
Query: 636 GGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDV 695
+ + APE++ K DV
Sbjct: 191 TRGGK---------------------------------IPIRWTAPEAIAYRKFTSASDV 217
Query: 696 YSFGVILLELLT 707
+S+G+++ E+++
Sbjct: 218 WSYGIVMWEVMS 229
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 46/218 (21%)
Query: 497 EDGTALAVRRIGENSVDRFR-DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555
E T +AV+ + E++ R R +F + V+ ++VR+ G L++ + + +
Sbjct: 45 EAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAH 104
Query: 556 GSLANARYRKM--------GSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNV 607
G L + R + G P L + +++A +A G+A+L+ KK VH NL RN
Sbjct: 105 GDL-KSYLRSLRPEAENNPGRPPPTL--QEMIQMAAEIADGMAYLNAKKFVHRNLAARNC 161
Query: 608 LLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXX 667
++ +D KIGDFG+ R + +T + GG
Sbjct: 162 MVAHDFTVKIGDFGMTRDIY-ETDYYRKGGKG---------------------------- 192
Query: 668 XXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLEL 705
+ APESL+ D++SFGV+L E+
Sbjct: 193 -----LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 86/192 (44%), Gaps = 37/192 (19%)
Query: 516 RDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPW 575
RDF ++ ++ + HPN++R+ G +I+ +++ NGSL + +
Sbjct: 95 RDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTF----LRTHDGQFTI 150
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635
+ + +GV G+ +L + +VH +L RNVL+ +++ K+ DFGL R++ D ++
Sbjct: 151 MQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXT 210
Query: 636 GGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDV 695
+T + + + APE++ + DV
Sbjct: 211 -----------TTGGKIPIR----------------------WTAPEAIAFRTFSSASDV 237
Query: 696 YSFGVILLELLT 707
+SFGV++ E+L
Sbjct: 238 WSFGVVMWEVLA 249
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 46/218 (21%)
Query: 497 EDGTALAVRRIGENSVDRFR-DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555
E T +AV+ + E++ R R +F + V+ ++VR+ G L++ + + +
Sbjct: 46 EAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAH 105
Query: 556 GSLANARYRKM--------GSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNV 607
G L + R + G P L + +++A +A G+A+L+ KK VH NL RN
Sbjct: 106 GDL-KSYLRSLRPEAENNPGRPPPTL--QEMIQMAAEIADGMAYLNAKKFVHRNLAARNC 162
Query: 608 LLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXX 667
++ +D KIGDFG+ R + +T + GG
Sbjct: 163 MVAHDFTVKIGDFGMTRDIY-ETDYYRKGGKG---------------------------- 193
Query: 668 XXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLEL 705
+ APESL+ D++SFGV+L E+
Sbjct: 194 -----LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 226
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 44/196 (22%)
Query: 518 FETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNGSLANARYRKMGSSPCHLPW 575
F + +V+ K+ H LV++ Y V E+ I+ +++ GSL + +MG +L
Sbjct: 60 FLQEAQVMKKIRHEKLVQL---YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGK---YLRL 113
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635
+ +A +A G+A++ +VH +L+ N+L+G ++ K+ DFGL RL+ + +++
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 636 GGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDV 695
G F K + APE+ + K DV
Sbjct: 174 GA---KFPIK--------------------------------WTAPEAALYGRFTIKSDV 198
Query: 696 YSFGVILLELLT-GKV 710
+SFG++L EL T G+V
Sbjct: 199 WSFGILLTELTTKGRV 214
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 90/196 (45%), Gaps = 44/196 (22%)
Query: 518 FETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNGSLANARYRKMGSSPCHLPW 575
F + +V+ KL H LV++ Y V E+ I+ +++ GSL + +MG +L
Sbjct: 60 FLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGK---YLRL 113
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635
+ +A +A G+A++ +VH +L N+L+G ++ K+ DFGL RL+ + +++
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 636 GGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDV 695
G F K + APE+ + K DV
Sbjct: 174 GA---KFPIK--------------------------------WTAPEAALYGRFTIKSDV 198
Query: 696 YSFGVILLELLT-GKV 710
+SFG++L EL T G+V
Sbjct: 199 WSFGILLTELTTKGRV 214
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 86/192 (44%), Gaps = 37/192 (19%)
Query: 516 RDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPW 575
RDF ++ ++ + HPN++R+ G +I+ +++ NGSL + +
Sbjct: 95 RDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTF----LRTHDGQFTI 150
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635
+ + +GV G+ +L + +VH +L RNVL+ +++ K+ DFGL R++ D ++
Sbjct: 151 MQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYT 210
Query: 636 GGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDV 695
+T + + + APE++ + DV
Sbjct: 211 -----------TTGGKIPIR----------------------WTAPEAIAFRTFSSASDV 237
Query: 696 YSFGVILLELLT 707
+SFGV++ E+L
Sbjct: 238 WSFGVVMWEVLA 249
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 61/234 (26%)
Query: 477 KASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVR 535
K S +IL +++KA LE G +RR +V + + L HPN++R
Sbjct: 31 KQSKFILALK---VLFKAQLEKAGVEHQLRR--------------EVEIQSHLRHPNILR 73
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK 595
+ G++ +I ++ P G++ YR++ I + +A L++ H K
Sbjct: 74 LYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITE-LANALSYCHSK 128
Query: 596 KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQ 655
+ +H ++KP N+LLG+ E KI DFG S S+R+T S
Sbjct: 129 RVIHRDIKPENLLLGSAGELKIADFGW---------------SCHAPSSRRTTLS----- 168
Query: 656 DLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709
Y PE + + K D++S GV+ E L GK
Sbjct: 169 ------------------GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 94/218 (43%), Gaps = 46/218 (21%)
Query: 497 EDGTALAVRRIGENSVDRFR-DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555
E T +AV+ + E++ R R +F + V+ ++VR+ G L++ + + +
Sbjct: 45 EAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAH 104
Query: 556 GSLANARYRKM--------GSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNV 607
G L + R + G P L + +++A +A G+A+L+ KK VH +L RN
Sbjct: 105 GDL-KSYLRSLRPEAENNPGRPPPTL--QEMIQMAAEIADGMAYLNAKKFVHRDLAARNC 161
Query: 608 LLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXX 667
++ +D KIGDFG+ R + +T + GG
Sbjct: 162 MVAHDFTVKIGDFGMTRDIX-ETDXXRKGGKG---------------------------- 192
Query: 668 XXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLEL 705
+ APESL+ D++SFGV+L E+
Sbjct: 193 -----LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 94/218 (43%), Gaps = 46/218 (21%)
Query: 497 EDGTALAVRRIGENSVDRFR-DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555
E T +AV+ + E++ R R +F + V+ ++VR+ G L++ + + +
Sbjct: 42 EAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAH 101
Query: 556 GSLANARYRKM--------GSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNV 607
G L + R + G P L + +++A +A G+A+L+ KK VH +L RN
Sbjct: 102 GDL-KSYLRSLRPEAENNPGRPPPTL--QEMIQMAAEIADGMAYLNAKKFVHRDLAARNC 158
Query: 608 LLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXX 667
++ +D KIGDFG+ R + +T + GG
Sbjct: 159 MVAHDFTVKIGDFGMTRDIX-ETDXXRKGGKG---------------------------- 189
Query: 668 XXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLEL 705
+ APESL+ D++SFGV+L E+
Sbjct: 190 -----LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 44/196 (22%)
Query: 518 FETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNGSLANARYRKMGSSPCHLPW 575
F + +V+ KL H LV++ Y V E+ I+ +++ G L + +MG +L
Sbjct: 60 FLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVMEYMSKGCLLDFLKGEMGK---YLRL 113
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635
+ +A +A G+A++ +VH +L+ N+L+G ++ K+ DFGL RL+ + +++
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 636 GGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDV 695
G F K + APE+ + K DV
Sbjct: 174 GA---KFPIK--------------------------------WTAPEAALYGRFTIKSDV 198
Query: 696 YSFGVILLELLT-GKV 710
+SFG++L EL T G+V
Sbjct: 199 WSFGILLTELTTKGRV 214
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 94/218 (43%), Gaps = 46/218 (21%)
Query: 497 EDGTALAVRRIGENSVDRFR-DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555
E T +AV+ + E++ R R +F + V+ ++VR+ G L++ + + +
Sbjct: 45 EAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAH 104
Query: 556 GSLANARYRKM--------GSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNV 607
G L + R + G P L + +++A +A G+A+L+ KK VH +L RN
Sbjct: 105 GDL-KSYLRSLRPEAENNPGRPPPTL--QEMIQMAAEIADGMAYLNAKKFVHRDLAARNC 161
Query: 608 LLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXX 667
++ +D KIGDFG+ R + +T + GG
Sbjct: 162 MVAHDFTVKIGDFGMTRDIX-ETDXXRKGGKG---------------------------- 192
Query: 668 XXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLEL 705
+ APESL+ D++SFGV+L E+
Sbjct: 193 -----LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 109/261 (41%), Gaps = 46/261 (17%)
Query: 458 KGTLVIVDGDKELELETLLKAS-AYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFR 516
+G +VI+D L ++ L + +Y+ G L DG A++RI +
Sbjct: 20 QGHMVIIDNKHYLFIQKLGEGGFSYVDLVEG--------LHDGHFYALKRILCHEQQDRE 71
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYW----GVDEKLIIYDFVPNGSLANARYRKMGSSPCH 572
+ + + + HPN++R+ + E ++ F G+L N ++
Sbjct: 72 EAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWN-EIERLKDKGNF 130
Query: 573 LPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632
L + L + G+ RGL +H K + H +LKP N+LLG++ +P + D G
Sbjct: 131 LTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEG 190
Query: 633 SKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPN-- 690
S+ + +++ ++R T S Y APE L S++ +
Sbjct: 191 SRQALTLQDWAAQRCTIS---------------------------YRAPE-LFSVQSHCV 222
Query: 691 --PKWDVYSFGVILLELLTGK 709
+ DV+S G +L ++ G+
Sbjct: 223 IDERTDVWSLGCVLYAMMFGE 243
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 12/171 (7%)
Query: 473 ETLLKASAYILGASGSSIMYKAV-LEDGTAL----AVRRIGENSVDRFR-DFETQVRVIA 526
ET LK +LG+ +YK + + +G + A++ + E + + +F + ++A
Sbjct: 14 ETELK-RVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMA 72
Query: 527 KLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVA 586
+ HP+LVR+ G +L+ +P+G L + + L L +A
Sbjct: 73 SMDHPHLVRLLGVCLSPTIQLVT-QLMPHGCLLEYVHEHKDNIGSQL----LLNWCVQIA 127
Query: 587 RGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637
+G+ +L E++ VH +L RNVL+ + KI DFGL RL+ GD A G
Sbjct: 128 KGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADG 178
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 105/230 (45%), Gaps = 48/230 (20%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
LG +YKA ++ ALA ++ E S + D+ ++ ++A HP +V++ G Y+
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 542 GVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK-IAKGVARGLAFLHEKKHVHG 600
+ I+ +F P G++ +A ++ E +++ + + + L FLH K+ +H
Sbjct: 79 HDGKLWIMIEFCPGGAV-DAIMLELDRGLT----EPQIQVVCRQMLEALNFLHSKRIIHR 133
Query: 601 NLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXX 660
+LK NVL+ + + ++ DFG+ SA+N ++ RDSF
Sbjct: 134 DLKAGNVLMTLEGDIRLADFGV---------------SAKNL---KTLQKRDSF------ 169
Query: 661 XXXXXXXXXXXXXXXXXYHAPESL--RSIKPNP---KWDVYSFGVILLEL 705
+ APE + ++K P K D++S G+ L+E+
Sbjct: 170 ------------IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 44/196 (22%)
Query: 518 FETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNGSLANARYRKMGSSPCHLPW 575
F + +V+ KL H LV++ Y V E+ I+ +++ G L + +MG +L
Sbjct: 60 FLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSKGCLLDFLKGEMGK---YLRL 113
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635
+ +A +A G+A++ +VH +L+ N+L+G ++ K+ DFGL RL+ + +++
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 636 GGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDV 695
G F K + APE+ + K DV
Sbjct: 174 GA---KFPIK--------------------------------WTAPEAALYGRFTIKSDV 198
Query: 696 YSFGVILLELLT-GKV 710
+SFG++L EL T G+V
Sbjct: 199 WSFGILLTELTTKGRV 214
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 91/209 (43%), Gaps = 40/209 (19%)
Query: 500 TALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLA 559
A+ ++G R RDF + ++ + HPN++ + G +I+ +++ NGSL
Sbjct: 53 VAIKTLKVGYTEKQR-RDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLD 111
Query: 560 NARYRKMGS-SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIG 618
+ G + L + + +G++ G+ +L + +VH +L RN+L+ +++ K+
Sbjct: 112 TFLKKNDGQFTVIQL-----VGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVS 166
Query: 619 DFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXY 678
DFGL R++ D ++ + +
Sbjct: 167 DFGLSRVLEDDPEAAYTTRGGK---------------------------------IPIRW 193
Query: 679 HAPESLRSIKPNPKWDVYSFGVILLELLT 707
APE++ K DV+S+G+++ E+++
Sbjct: 194 TAPEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 44/196 (22%)
Query: 518 FETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNGSLANARYRKMGSSPCHLPW 575
F + +V+ KL H LV++ Y V E+ I+ +++ GSL + + G +L
Sbjct: 226 FLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSKGSLLDFLKGETGK---YLRL 279
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635
+ +A +A G+A++ +VH +L+ N+L+G ++ K+ DFGL RL+ + +++
Sbjct: 280 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339
Query: 636 GGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDV 695
G F K + APE+ + K DV
Sbjct: 340 GA---KFPIK--------------------------------WTAPEAALYGRFTIKSDV 364
Query: 696 YSFGVILLELLT-GKV 710
+SFG++L EL T G+V
Sbjct: 365 WSFGILLTELTTKGRV 380
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 44/196 (22%)
Query: 518 FETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNGSLANARYRKMGSSPCHLPW 575
F + +V+ KL H LV++ Y V E+ I+ +++ GSL + + G +L
Sbjct: 226 FLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSKGSLLDFLKGETGK---YLRL 279
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635
+ +A +A G+A++ +VH +L+ N+L+G ++ K+ DFGL RL+ + +++
Sbjct: 280 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339
Query: 636 GGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDV 695
G F K + APE+ + K DV
Sbjct: 340 GA---KFPIK--------------------------------WTAPEAALYGRFTIKSDV 364
Query: 696 YSFGVILLELLT-GKV 710
+SFG++L EL T G+V
Sbjct: 365 WSFGILLTELTTKGRV 380
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 105/230 (45%), Gaps = 48/230 (20%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
LG +YKA ++ ALA ++ E S + D+ ++ ++A HP +V++ G Y+
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 542 GVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIA-KGVARGLAFLHEKKHVHG 600
+ I+ +F P G++ +A ++ E ++++ + + L FLH K+ +H
Sbjct: 87 HDGKLWIMIEFCPGGAV-DAIMLELDRGLT----EPQIQVVCRQMLEALNFLHSKRIIHR 141
Query: 601 NLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXX 660
+LK NVL+ + + ++ DFG+ SA+N ++ RDSF
Sbjct: 142 DLKAGNVLMTLEGDIRLADFGV---------------SAKNL---KTLQKRDSF------ 177
Query: 661 XXXXXXXXXXXXXXXXXYHAPESL--RSIKPNP---KWDVYSFGVILLEL 705
+ APE + ++K P K D++S G+ L+E+
Sbjct: 178 ------------IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 95/228 (41%), Gaps = 62/228 (27%)
Query: 487 GSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEK 546
G+ + K + D TA A F + V+ +L H NLV++ G V+EK
Sbjct: 29 GNKVAVKCIKNDATAQA--------------FLAEASVMTQLRHSNLVQLLGVI--VEEK 72
Query: 547 ---LIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLK 603
I+ +++ GSL + R G S L + LK + V + +L VH +L
Sbjct: 73 GGLYIVTEYMAKGSLVD-YLRSRGRSV--LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLA 129
Query: 604 PRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXX 663
RNVL+ D K+ DFGL T + SS++ G
Sbjct: 130 ARNVLVSEDNVAKVSDFGL----TKEASSTQDTGK------------------------- 160
Query: 664 XXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKV 710
+ APE+LR K + K DV+SFG++L E+ + G+V
Sbjct: 161 ----------LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 198
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 20/185 (10%)
Query: 482 ILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFY 540
++G ++Y+A L D G +A++++ ++ RF++ E Q+ + KL H N+VR+R F+
Sbjct: 28 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDK--RFKNRELQI--MRKLDHCNIVRLRYFF 83
Query: 541 WGVDEKL------IIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ EK ++ D+VP AR+ LP + R LA++H
Sbjct: 84 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVIYVKLYMYQLFRSLAYIHS 141
Query: 595 KKHVHGNLKPRNVLLGNDMEP-KIGDFG-LERLVTGDTSSSKAGGSARN-----FGSKRS 647
H ++KP+N+LL D K+ DFG ++LV G+ + S FG+
Sbjct: 142 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 201
Query: 648 TASRD 652
T+S D
Sbjct: 202 TSSID 206
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 20/185 (10%)
Query: 482 ILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFY 540
++G ++Y+A L D G +A++++ ++ RF++ E Q+ + KL H N+VR+R F+
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDK--RFKNRELQI--MRKLDHCNIVRLRYFF 82
Query: 541 WGVDEKL------IIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ EK ++ D+VP AR+ LP + R LA++H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVIYVKLYMYQLFRSLAYIHS 140
Query: 595 KKHVHGNLKPRNVLLGNDMEP-KIGDFG-LERLVTGDTSSSKAGGSARN-----FGSKRS 647
H ++KP+N+LL D K+ DFG ++LV G+ + S FG+
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 200
Query: 648 TASRD 652
T+S D
Sbjct: 201 TSSID 205
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 95/218 (43%), Gaps = 46/218 (21%)
Query: 497 EDGTALAVRRIGENSVDRFR-DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555
E T +AV+ + E++ R R +F + V+ ++VR+ G L++ + + +
Sbjct: 45 EAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAH 104
Query: 556 GSLANARYRKM--------GSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNV 607
G L + R + G P L + +++A +A G+A+L+ KK VH +L RN
Sbjct: 105 GDL-KSYLRSLRPEAENNPGRPPPTL--QEMIQMAAEIADGMAYLNAKKFVHRDLAARNC 161
Query: 608 LLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXX 667
++ +D KIGDFG+ R + +T+ + GG
Sbjct: 162 MVAHDFTVKIGDFGMTRDIY-ETAYYRKGGKG---------------------------- 192
Query: 668 XXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLEL 705
+ APESL+ D++SFGV+L E+
Sbjct: 193 -----LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 95/228 (41%), Gaps = 62/228 (27%)
Query: 487 GSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEK 546
G+ + K + D TA A F + V+ +L H NLV++ G V+EK
Sbjct: 216 GNKVAVKCIKNDATAQA--------------FLAEASVMTQLRHSNLVQLLGVI--VEEK 259
Query: 547 ---LIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLK 603
I+ +++ GSL + R G S L + LK + V + +L VH +L
Sbjct: 260 GGLYIVTEYMAKGSLVD-YLRSRGRSV--LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLA 316
Query: 604 PRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXX 663
RNVL+ D K+ DFGL T + SS++ G
Sbjct: 317 ARNVLVSEDNVAKVSDFGL----TKEASSTQDTGK------------------------- 347
Query: 664 XXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKV 710
+ APE+LR K + K DV+SFG++L E+ + G+V
Sbjct: 348 ----------LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 385
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 12/171 (7%)
Query: 473 ETLLKASAYILGASGSSIMYKAV-LEDGTAL----AVRRIGENSVDRFR-DFETQVRVIA 526
ET LK +LG+ +YK + + +G + A++ + E + + +F + ++A
Sbjct: 37 ETELK-RVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMA 95
Query: 527 KLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVA 586
+ HP+LVR+ G +L+ +P+G L + + L L +A
Sbjct: 96 SMDHPHLVRLLGVCLSPTIQLVT-QLMPHGCLLEYVHEHKDNIGSQL----LLNWCVQIA 150
Query: 587 RGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637
+G+ +L E++ VH +L RNVL+ + KI DFGL RL+ GD A G
Sbjct: 151 KGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADG 201
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 83/161 (51%), Gaps = 15/161 (9%)
Query: 482 ILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFY 540
++G ++Y+A L D G +A++++ ++ RF++ E Q+ + KL H N+VR+R F+
Sbjct: 55 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDK--RFKNRELQI--MRKLDHCNIVRLRYFF 110
Query: 541 WGVDEKL------IIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ EK ++ D+VP AR+ LP + R LA++H
Sbjct: 111 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVIYVKLYMYQLFRSLAYIHS 168
Query: 595 KKHVHGNLKPRNVLLGNDMEP-KIGDFG-LERLVTGDTSSS 633
H ++KP+N+LL D K+ DFG ++LV G+ + S
Sbjct: 169 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 209
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 91/187 (48%), Gaps = 15/187 (8%)
Query: 456 NKKGTLVIVDGDKELELETLLKASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDR 514
+K T+V G + + ++G ++Y+A L D G +A++++ ++ R
Sbjct: 39 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK--R 96
Query: 515 FRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKL------IIYDFVPNGSLANARYRKMGS 568
F++ E Q+ + KL H N+VR+R F++ EK ++ D+VP AR+
Sbjct: 97 FKNRELQI--MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 154
Query: 569 SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP-KIGDFG-LERLV 626
LP + R LA++H H ++KP+N+LL D K+ DFG ++LV
Sbjct: 155 Q--TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 212
Query: 627 TGDTSSS 633
G+ + S
Sbjct: 213 RGEPNVS 219
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 20/185 (10%)
Query: 482 ILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFY 540
++G ++Y+A L D G +A++++ ++ RF++ E Q+ + KL H N+VR+R F+
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDK--RFKNRELQI--MRKLDHCNIVRLRYFF 82
Query: 541 WGVDEKL------IIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ EK ++ D+VP AR+ LP + R LA++H
Sbjct: 83 YSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVIYVKLYMYQLFRSLAYIHS 140
Query: 595 KKHVHGNLKPRNVLLGNDMEP-KIGDFG-LERLVTGDTSSSKAGGSARN-----FGSKRS 647
H ++KP+N+LL D K+ DFG ++LV G+ + S FG+
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 200
Query: 648 TASRD 652
T+S D
Sbjct: 201 TSSID 205
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 94/234 (40%), Gaps = 61/234 (26%)
Query: 477 KASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVR 535
K S +IL +++KA LE G +RR +V + + L HPN++R
Sbjct: 47 KQSKFILALK---VLFKAQLEKAGVEHQLRR--------------EVEIQSHLRHPNILR 89
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK 595
+ G++ +I ++ P G++ YR++ I + +A L++ H K
Sbjct: 90 LYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITE-LANALSYCHSK 144
Query: 596 KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQ 655
+ +H ++KP N+LLG+ E KI DFG S S+R+T
Sbjct: 145 RVIHRDIKPENLLLGSAGELKIADFGW---------------SVHAPSSRRTTLC----- 184
Query: 656 DLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709
Y PE + + K D++S GV+ E L GK
Sbjct: 185 ------------------GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 95/228 (41%), Gaps = 62/228 (27%)
Query: 487 GSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEK 546
G+ + K + D TA A F + V+ +L H NLV++ G V+EK
Sbjct: 44 GNKVAVKCIKNDATAQA--------------FLAEASVMTQLRHSNLVQLLGVI--VEEK 87
Query: 547 ---LIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLK 603
I+ +++ GSL + R G S L + LK + V + +L VH +L
Sbjct: 88 GGLYIVTEYMAKGSLVD-YLRSRGRSV--LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLA 144
Query: 604 PRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXX 663
RNVL+ D K+ DFGL T + SS++ G
Sbjct: 145 ARNVLVSEDNVAKVSDFGL----TKEASSTQDTGK------------------------- 175
Query: 664 XXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKV 710
+ APE+LR K + K DV+SFG++L E+ + G+V
Sbjct: 176 ----------LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 213
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 20/185 (10%)
Query: 482 ILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFY 540
++G ++Y+A L D G +A++++ ++ RF++ E Q+ + KL H N+VR+R F+
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDK--RFKNRELQI--MRKLDHCNIVRLRYFF 82
Query: 541 WGVDEKL------IIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ EK ++ D+VP AR+ LP + R LA++H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVIYVKLYMYQLFRSLAYIHS 140
Query: 595 KKHVHGNLKPRNVLLGNDMEP-KIGDFG-LERLVTGDTSSSKAGGSARN-----FGSKRS 647
H ++KP+N+LL D K+ DFG ++LV G+ + S FG+
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 200
Query: 648 TASRD 652
T+S D
Sbjct: 201 TSSID 205
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 91/187 (48%), Gaps = 15/187 (8%)
Query: 456 NKKGTLVIVDGDKELELETLLKASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDR 514
+K T+V G + + ++G ++Y+A L D G +A++++ ++ R
Sbjct: 35 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK--R 92
Query: 515 FRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKL------IIYDFVPNGSLANARYRKMGS 568
F++ E Q+ + KL H N+VR+R F++ EK ++ D+VP AR+
Sbjct: 93 FKNRELQI--MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 150
Query: 569 SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP-KIGDFG-LERLV 626
LP + R LA++H H ++KP+N+LL D K+ DFG ++LV
Sbjct: 151 Q--TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208
Query: 627 TGDTSSS 633
G+ + S
Sbjct: 209 RGEPNVS 215
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 91/187 (48%), Gaps = 15/187 (8%)
Query: 456 NKKGTLVIVDGDKELELETLLKASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDR 514
+K T+V G + + ++G ++Y+A L D G +A++++ ++ R
Sbjct: 37 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK--R 94
Query: 515 FRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKL------IIYDFVPNGSLANARYRKMGS 568
F++ E Q+ + KL H N+VR+R F++ EK ++ D+VP AR+
Sbjct: 95 FKNRELQI--MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 152
Query: 569 SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP-KIGDFG-LERLV 626
LP + R LA++H H ++KP+N+LL D K+ DFG ++LV
Sbjct: 153 Q--TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 210
Query: 627 TGDTSSS 633
G+ + S
Sbjct: 211 RGEPNVS 217
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 83/161 (51%), Gaps = 15/161 (9%)
Query: 482 ILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFY 540
++G ++Y+A L D G +A++++ ++ RF++ E Q+ + KL H N+VR+R F+
Sbjct: 46 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDK--RFKNRELQI--MRKLDHCNIVRLRYFF 101
Query: 541 WGVDEKL------IIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ EK ++ D+VP AR+ LP + R LA++H
Sbjct: 102 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVIYVKLYMYQLFRSLAYIHS 159
Query: 595 KKHVHGNLKPRNVLLGNDMEP-KIGDFG-LERLVTGDTSSS 633
H ++KP+N+LL D K+ DFG ++LV G+ + S
Sbjct: 160 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 200
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 91/187 (48%), Gaps = 15/187 (8%)
Query: 456 NKKGTLVIVDGDKELELETLLKASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDR 514
+K T+V G + + ++G ++Y+A L D G +A++++ ++ R
Sbjct: 35 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK--R 92
Query: 515 FRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKL------IIYDFVPNGSLANARYRKMGS 568
F++ E Q+ + KL H N+VR+R F++ EK ++ D+VP AR+
Sbjct: 93 FKNRELQI--MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 150
Query: 569 SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP-KIGDFG-LERLV 626
LP + R LA++H H ++KP+N+LL D K+ DFG ++LV
Sbjct: 151 Q--TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208
Query: 627 TGDTSSS 633
G+ + S
Sbjct: 209 RGEPNVS 215
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 83/161 (51%), Gaps = 15/161 (9%)
Query: 482 ILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFY 540
++G ++Y+A L D G +A++++ ++ RF++ E Q+ + KL H N+VR+R F+
Sbjct: 40 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDK--RFKNRELQI--MRKLDHCNIVRLRYFF 95
Query: 541 WGVDEKL------IIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ EK ++ D+VP AR+ LP + R LA++H
Sbjct: 96 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVIYVKLYMYQLFRSLAYIHS 153
Query: 595 KKHVHGNLKPRNVLLGNDMEP-KIGDFG-LERLVTGDTSSS 633
H ++KP+N+LL D K+ DFG ++LV G+ + S
Sbjct: 154 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 194
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 46/237 (19%)
Query: 483 LGASGSSIMYKAVL------EDGTALAVRRIGENSVDRFR-DFETQVRVIAKLVHPNLVR 535
LG ++Y+ V E T +A++ + E + R R +F + V+ + ++VR
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN---ARYRKMGSSPCHLP--WEARLKIAKGVARGLA 590
+ G L+I + + G L + + +M ++P P +++A +A G+A
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 591 FLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTAS 650
+L+ K VH +L RN ++ D KIGDFG+ R + +T + GG
Sbjct: 138 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIX-ETDXXRKGGKG----------- 185
Query: 651 RDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ +PESL+ DV+SFGV+L E+ T
Sbjct: 186 ----------------------LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 83/161 (51%), Gaps = 15/161 (9%)
Query: 482 ILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFY 540
++G ++Y+A L D G +A++++ ++ RF++ E Q+ + KL H N+VR+R F+
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDK--RFKNRELQI--MRKLDHCNIVRLRYFF 82
Query: 541 WGVDEKL------IIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ EK ++ D+VP AR+ LP + R LA++H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVIYVKLYMYQLFRSLAYIHS 140
Query: 595 KKHVHGNLKPRNVLLGNDMEP-KIGDFG-LERLVTGDTSSS 633
H ++KP+N+LL D K+ DFG ++LV G+ + S
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 46/237 (19%)
Query: 483 LGASGSSIMYKAVL------EDGTALAVRRIGENSVDRFR-DFETQVRVIAKLVHPNLVR 535
LG ++Y+ V E T +A++ + E + R R +F + V+ + ++VR
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN---ARYRKMGSSPCHLP--WEARLKIAKGVARGLA 590
+ G L+I + + G L + + +M ++P P +++A +A G+A
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 591 FLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTAS 650
+L+ K VH +L RN ++ D KIGDFG+ R + +T + GG
Sbjct: 147 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIX-ETDXXRKGGKG----------- 194
Query: 651 RDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ +PESL+ DV+SFGV+L E+ T
Sbjct: 195 ----------------------LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 83/161 (51%), Gaps = 15/161 (9%)
Query: 482 ILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFY 540
++G ++Y+A L D G +A++++ ++ RF++ E Q+ + KL H N+VR+R F+
Sbjct: 35 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDK--RFKNRELQI--MRKLDHCNIVRLRYFF 90
Query: 541 WGVDEKL------IIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ EK ++ D+VP AR+ LP + R LA++H
Sbjct: 91 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVIYVKLYMYQLFRSLAYIHS 148
Query: 595 KKHVHGNLKPRNVLLGNDMEP-KIGDFG-LERLVTGDTSSS 633
H ++KP+N+LL D K+ DFG ++LV G+ + S
Sbjct: 149 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 189
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 94/234 (40%), Gaps = 61/234 (26%)
Query: 477 KASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVR 535
K S +IL +++KA LE G +RR +V + + L HPN++R
Sbjct: 35 KQSKFILALK---VLFKAQLEKAGVEHQLRR--------------EVEIQSHLRHPNILR 77
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK 595
+ G++ +I ++ P G++ YR++ I + +A L++ H K
Sbjct: 78 LYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITE-LANALSYCHSK 132
Query: 596 KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQ 655
+ +H ++KP N+LLG+ E KI DFG S S+R+T
Sbjct: 133 RVIHRDIKPENLLLGSAGELKIADFGW---------------SVHAPSSRRTTLC----- 172
Query: 656 DLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709
Y PE + + K D++S GV+ E L GK
Sbjct: 173 ------------------GTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 101/245 (41%), Gaps = 55/245 (22%)
Query: 475 LLKASAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKL-VHPNL 533
+++A+A+ LG + + + TA A D +++++++ L H N+
Sbjct: 62 VVEATAFGLGKEDAVLKVAVKMLKSTAHA---------DEKEALMSELKIMSHLGQHENI 112
Query: 534 VRIRGFYWGVDEKLIIYDFVPNGSLANARYRK------MGSSPCHLPWEAR-----LKIA 582
V + G L+I ++ G L N RK +P H P E L +
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFS 172
Query: 583 KGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNF 642
VA+G+AFL K +H ++ RNVLL N KIGDFGL R + D S+ G+AR
Sbjct: 173 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND-SNYIVKGNAR-- 229
Query: 643 GSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVIL 702
+ APES+ + DV+S+G++L
Sbjct: 230 -------------------------------LPVKWMAPESIFDCVYTVQSDVWSYGILL 258
Query: 703 LELLT 707
E+ +
Sbjct: 259 WEIFS 263
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 83/161 (51%), Gaps = 15/161 (9%)
Query: 482 ILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFY 540
++G ++Y+A L D G +A++++ ++ RF++ E Q+ + KL H N+VR+R F+
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDK--RFKNRELQI--MRKLDHCNIVRLRYFF 94
Query: 541 WGVDEKL------IIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ EK ++ D+VP AR+ LP + R LA++H
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVIYVKLYMYQLFRSLAYIHS 152
Query: 595 KKHVHGNLKPRNVLLGNDMEP-KIGDFG-LERLVTGDTSSS 633
H ++KP+N+LL D K+ DFG ++LV G+ + S
Sbjct: 153 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 193
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 94/234 (40%), Gaps = 61/234 (26%)
Query: 477 KASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVR 535
K S +IL +++KA LE G +RR +V + + L HPN++R
Sbjct: 56 KQSKFILALK---VLFKAQLEKAGVEHQLRR--------------EVEIQSHLRHPNILR 98
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK 595
+ G++ +I ++ P G++ YR++ I + +A L++ H K
Sbjct: 99 LYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITE-LANALSYCHSK 153
Query: 596 KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQ 655
+ +H ++KP N+LLG+ E KI DFG S S+R+T
Sbjct: 154 RVIHRDIKPENLLLGSAGELKIADFGW---------------SVHAPSSRRTTLC----- 193
Query: 656 DLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709
Y PE + + K D++S GV+ E L GK
Sbjct: 194 ------------------GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 83/161 (51%), Gaps = 15/161 (9%)
Query: 482 ILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFY 540
++G ++Y+A L D G +A++++ ++ RF++ E Q+ + KL H N+VR+R F+
Sbjct: 32 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDK--RFKNRELQI--MRKLDHCNIVRLRYFF 87
Query: 541 WGVDEKL------IIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ EK ++ D+VP AR+ LP + R LA++H
Sbjct: 88 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVIYVKLYMYQLFRSLAYIHS 145
Query: 595 KKHVHGNLKPRNVLLGNDMEP-KIGDFG-LERLVTGDTSSS 633
H ++KP+N+LL D K+ DFG ++LV G+ + S
Sbjct: 146 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 186
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 20/185 (10%)
Query: 482 ILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFY 540
++G ++Y+A L D G +A++++ ++ RF++ E Q+ + KL H N+VR+R F+
Sbjct: 31 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDK--RFKNRELQI--MRKLDHCNIVRLRYFF 86
Query: 541 WGVDEKL------IIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ EK ++ D+VP AR+ LP + R LA++H
Sbjct: 87 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVIYVKLYMYQLFRSLAYIHS 144
Query: 595 KKHVHGNLKPRNVLLGNDMEP-KIGDFG-LERLVTGDTSSSKAGGSARN-----FGSKRS 647
H ++KP+N+LL D K+ DFG ++LV G+ + S FG+
Sbjct: 145 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 204
Query: 648 TASRD 652
T+S D
Sbjct: 205 TSSID 209
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 91/187 (48%), Gaps = 15/187 (8%)
Query: 456 NKKGTLVIVDGDKELELETLLKASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDR 514
+K T+V G + + ++G ++Y+A L D G +A++++ ++ R
Sbjct: 80 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK--R 137
Query: 515 FRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKL------IIYDFVPNGSLANARYRKMGS 568
F++ E Q+ + KL H N+VR+R F++ EK ++ D+VP AR+
Sbjct: 138 FKNRELQI--MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 195
Query: 569 SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP-KIGDFG-LERLV 626
LP + R LA++H H ++KP+N+LL D K+ DFG ++LV
Sbjct: 196 Q--TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 253
Query: 627 TGDTSSS 633
G+ + S
Sbjct: 254 RGEPNVS 260
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 44/196 (22%)
Query: 518 FETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNGSLANARYRKMGSSPCHLPW 575
F + +V+ KL H LV++ Y V E+ I+ +++ GSL + + G +L
Sbjct: 309 FLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSKGSLLDFLKGETGK---YLRL 362
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635
+ +A +A G+A++ +VH +L+ N+L+G ++ K+ DFGL RL+ + +++
Sbjct: 363 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 422
Query: 636 GGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDV 695
G F K + APE+ + K DV
Sbjct: 423 GA---KFPIK--------------------------------WTAPEAALYGRFTIKSDV 447
Query: 696 YSFGVILLELLT-GKV 710
+SFG++L EL T G+V
Sbjct: 448 WSFGILLTELTTKGRV 463
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 83/161 (51%), Gaps = 15/161 (9%)
Query: 482 ILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFY 540
++G ++Y+A L D G +A++++ ++ RF++ E Q+ + KL H N+VR+R F+
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDK--RFKNRELQI--MRKLDHCNIVRLRYFF 94
Query: 541 WGVDEKL------IIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ EK ++ D+VP AR+ LP + R LA++H
Sbjct: 95 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVIYVKLYMYQLFRSLAYIHS 152
Query: 595 KKHVHGNLKPRNVLLGNDMEP-KIGDFG-LERLVTGDTSSS 633
H ++KP+N+LL D K+ DFG ++LV G+ + S
Sbjct: 153 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 193
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 44/196 (22%)
Query: 518 FETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNGSLANARYRKMGSSPCHLPW 575
F + +V+ KL H LV++ Y V E+ I+ +++ GSL + + G +L
Sbjct: 226 FLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVGEYMSKGSLLDFLKGETGK---YLRL 279
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635
+ +A +A G+A++ +VH +L+ N+L+G ++ K+ DFGL RL+ + +++
Sbjct: 280 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339
Query: 636 GGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDV 695
G F K + APE+ + K DV
Sbjct: 340 GA---KFPIK--------------------------------WTAPEAALYGRFTIKSDV 364
Query: 696 YSFGVILLELLT-GKV 710
+SFG++L EL T G+V
Sbjct: 365 WSFGILLTELTTKGRV 380
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 44/196 (22%)
Query: 518 FETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNGSLANARYRKMGSSPCHLPW 575
F + +V+ KL H LV++ Y V E+ I+ +++ GSL + + G +L
Sbjct: 50 FLQEAQVMKKLRHEKLVQL---YAVVSEEPIXIVTEYMSKGSLLDFLKGETGK---YLRL 103
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635
+ +A +A G+A++ +VH +L+ N+L+G ++ K+ DFGL RL+ + +++
Sbjct: 104 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQ 163
Query: 636 GGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDV 695
G F K + APE+ + K DV
Sbjct: 164 GA---KFPIK--------------------------------WTAPEAALYGRFTIKSDV 188
Query: 696 YSFGVILLELLT-GKV 710
+SFG++L EL T G+V
Sbjct: 189 WSFGILLTELTTKGRV 204
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 99/231 (42%), Gaps = 44/231 (19%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRI--GENSVDRFRDFETQVRVIAKLVHPNLVRIRGFY 540
LGA ++ + T +AV+ + G SV F + + ++ L H LVR+
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLE---EANLMKTLQHDKLVRLYAVV 77
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHG 600
+ II +++ GSL + G LP + + +A G+A++ K ++H
Sbjct: 78 TREEPIYIITEYMAKGSLLDFLKSDEGGK-VLLP--KLIDFSAQIAEGMAYIERKNYIHR 134
Query: 601 NLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXX 660
+L+ NVL+ + KI DFGL R++ + +++ G F K
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGA---KFPIK--------------- 176
Query: 661 XXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKV 710
+ APE++ K DV+SFG++L E++T GK+
Sbjct: 177 -----------------WTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKI 210
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 23/146 (15%)
Query: 477 KASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVR 535
K S +IL +++KA LE G +RR +V + + L HPN++R
Sbjct: 56 KQSKFILALK---VLFKAQLEKAGVEHQLRR--------------EVEIQSHLRHPNILR 98
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK 595
+ G++ +I ++ P G++ YR++ I + +A L++ H K
Sbjct: 99 LYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITE-LANALSYCHSK 153
Query: 596 KHVHGNLKPRNVLLGNDMEPKIGDFG 621
+ +H ++KP N+LLG+ E KI DFG
Sbjct: 154 RVIHRDIKPENLLLGSAGELKIADFG 179
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 94/218 (43%), Gaps = 46/218 (21%)
Query: 497 EDGTALAVRRIGENSVDRFR-DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555
E T +AV+ + E++ R R +F + V+ ++VR+ G L++ + + +
Sbjct: 45 EAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAH 104
Query: 556 GSLANARYRKM--------GSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNV 607
G L + R + G P L + +++A +A G+A+L+ KK VH +L RN
Sbjct: 105 GDL-KSYLRSLRPEAENNPGRPPPTL--QEMIQMAAEIADGMAYLNAKKFVHRDLAARNC 161
Query: 608 LLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXX 667
++ +D KIGDFG+ R + +T + GG
Sbjct: 162 MVAHDFTVKIGDFGMTRDIY-ETDYYRKGGKG---------------------------- 192
Query: 668 XXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLEL 705
+ APESL+ D++SFGV+L E+
Sbjct: 193 -----LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 94/234 (40%), Gaps = 61/234 (26%)
Query: 477 KASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVR 535
K S +IL +++KA LE G +RR +V + + L HPN++R
Sbjct: 35 KQSKFILALK---VLFKAQLEKAGVEHQLRR--------------EVEIQSHLRHPNILR 77
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK 595
+ G++ +I ++ P G++ YR++ I + +A L++ H K
Sbjct: 78 LYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITE-LANALSYCHSK 132
Query: 596 KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQ 655
+ +H ++KP N+LLG+ E KI DFG S S+R+T
Sbjct: 133 RVIHRDIKPENLLLGSAGELKIADFGW---------------SVHAPSSRRTTLC----- 172
Query: 656 DLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709
Y PE + + K D++S GV+ E L GK
Sbjct: 173 ------------------GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 44/196 (22%)
Query: 518 FETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNGSLANARYRKMGSSPCHLPW 575
F + +V+ KL H LV++ Y V E+ I+ +++ GSL + + G +L
Sbjct: 53 FLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMSKGSLLDFLKGETGK---YLRL 106
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635
+ +A +A G+A++ +VH +L+ N+L+G ++ K+ DFGL RL+ + +++
Sbjct: 107 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 166
Query: 636 GGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDV 695
G F K + APE+ + K DV
Sbjct: 167 GA---KFPIK--------------------------------WTAPEAALYGRFTIKSDV 191
Query: 696 YSFGVILLELLT-GKV 710
+SFG++L EL T G+V
Sbjct: 192 WSFGILLTELTTKGRV 207
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 95/228 (41%), Gaps = 43/228 (18%)
Query: 483 LGASGSSIMYKAV-LEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
+G S +Y A+ + G +A+R++ + ++ V+ + +PN+V Y
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 542 GVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGN 601
DE ++ +++ GSL + + + C + + + + L FLH + +H N
Sbjct: 89 VGDELWVVMEYLAGGSLTD-----VVTETCMDEGQIA-AVCRECLQALEFLHSNQVIHRN 142
Query: 602 LKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXX 661
+K N+LLG D K+ DFG +T + SKRST +
Sbjct: 143 IKSDNILLGMDGSVKLTDFGFCAQITPEQ-------------SKRSTMVGTPY------- 182
Query: 662 XXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709
+ APE + PK D++S G++ +E++ G+
Sbjct: 183 ----------------WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 94/234 (40%), Gaps = 61/234 (26%)
Query: 477 KASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVR 535
K S +IL +++KA LE G +RR +V + + L HPN++R
Sbjct: 30 KQSKFILALK---VLFKAQLEKAGVEHQLRR--------------EVEIQSHLRHPNILR 72
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK 595
+ G++ +I ++ P G++ YR++ I + +A L++ H K
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITE-LANALSYCHSK 127
Query: 596 KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQ 655
+ +H ++KP N+LLG+ E KI DFG S S+R+T
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFGW---------------SVHAPSSRRTTLC----- 167
Query: 656 DLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709
Y PE + + K D++S GV+ E L GK
Sbjct: 168 ------------------GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 99/231 (42%), Gaps = 44/231 (19%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRI--GENSVDRFRDFETQVRVIAKLVHPNLVRIRGFY 540
LGA ++ + T +AV+ + G SV F + + ++ L H LVR+
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLE---EANLMKTLQHDKLVRLYAVV 76
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHG 600
+ II +F+ GSL + G LP + + +A G+A++ K ++H
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLKSDEGGK-VLLP--KLIDFSAQIAEGMAYIERKNYIHR 133
Query: 601 NLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXX 660
+L+ NVL+ + KI DFGL R++ + +++ G F K
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGA---KFPIK--------------- 175
Query: 661 XXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKV 710
+ APE++ K +V+SFG++L E++T GK+
Sbjct: 176 -----------------WTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKI 209
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 107/254 (42%), Gaps = 55/254 (21%)
Query: 466 GDKELELETLLKASAYILGASGSSIMYKAVLEDGTALAVRRIGENS-VDRFRDFETQVRV 524
D E+E E + + L G + K+V+ + + GE +++F++F+ +V +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 525 IAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKG 584
++ L HPN+V++ G + ++ +FVP G L Y ++ + W +L++
Sbjct: 77 MSNLNHPNIVKLYGLMH--NPPRMVMEFVPCGDL----YHRLLDKAHPIKWSVKLRLMLD 130
Query: 585 VARGLAFLHEKKH--VHGNLKPRNVLLGNDME-----PKIGDFGLERLVTGDTSSSKAGG 637
+A G+ ++ + VH +L+ N+ L + E K+ DFG T S G
Sbjct: 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG-----TSQQSVHSVSG 185
Query: 638 SARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPN--PKWDV 695
NF + APE++ + + + K D
Sbjct: 186 LLGNF----------------------------------QWMAPETIGAEEESYTEKADT 211
Query: 696 YSFGVILLELLTGK 709
YSF +IL +LTG+
Sbjct: 212 YSFAMILYTILTGE 225
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 94/234 (40%), Gaps = 61/234 (26%)
Query: 477 KASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVR 535
K S +IL +++KA LE G +RR +V + + L HPN++R
Sbjct: 33 KQSKFILALK---VLFKAQLEKAGVEHQLRR--------------EVEIQSHLRHPNILR 75
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK 595
+ G++ +I ++ P G++ YR++ I + +A L++ H K
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITE-LANALSYCHSK 130
Query: 596 KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQ 655
+ +H ++KP N+LLG+ E KI DFG S S+R+T
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFGW---------------SVHAPSSRRTTLC----- 170
Query: 656 DLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709
Y PE + + K D++S GV+ E L GK
Sbjct: 171 ------------------GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 99/237 (41%), Gaps = 46/237 (19%)
Query: 483 LGASGSSIMYKAVL------EDGTALAVRRIGENSVDRFR-DFETQVRVIAKLVHPNLVR 535
LG ++Y+ V E T +A++ + E + R R +F + V+ + ++VR
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN---ARYRKMGSSPCHLP--WEARLKIAKGVARGLA 590
+ G L+I + + G L + + M ++P P +++A +A G+A
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 591 FLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTAS 650
+L+ K VH +L RN ++ D KIGDFG+ R + +T + GG
Sbjct: 153 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY-ETDYYRKGGKG----------- 200
Query: 651 RDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ +PESL+ DV+SFGV+L E+ T
Sbjct: 201 ----------------------LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 108/254 (42%), Gaps = 55/254 (21%)
Query: 466 GDKELELETLLKASAYILGASGSSIMYKAVLEDGTALAVRRIGENS-VDRFRDFETQVRV 524
D E+E E + + L G + K+V+ + + GE +++F++F+ +V +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 525 IAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKG 584
++ L HPN+V++ G + ++ +FVP G L Y ++ + W +L++
Sbjct: 77 MSNLNHPNIVKLYGLMH--NPPRMVMEFVPCGDL----YHRLLDKAHPIKWSVKLRLMLD 130
Query: 585 VARGLAFLHEKKH--VHGNLKPRNVLLGNDME-----PKIGDFGLERLVTGDTSSSKAGG 637
+A G+ ++ + VH +L+ N+ L + E K+ DFGL + S G
Sbjct: 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSG 185
Query: 638 SARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPN--PKWDV 695
NF + APE++ + + + K D
Sbjct: 186 LLGNF----------------------------------QWMAPETIGAEEESYTEKADT 211
Query: 696 YSFGVILLELLTGK 709
YSF +IL +LTG+
Sbjct: 212 YSFAMILYTILTGE 225
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 44/196 (22%)
Query: 518 FETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNGSLANARYRKMGSSPCHLPW 575
F + +++ KL H LV++ Y V E+ I+ +++ GSL + G + LP
Sbjct: 51 FLEEAQIMKKLKHDKLVQL---YAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRA-LKLP- 105
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635
+ +A VA G+A++ ++H +L+ N+L+GN + KI DFGL RL+ + +++
Sbjct: 106 -NLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQ 164
Query: 636 GGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDV 695
G F K + APE+ + K DV
Sbjct: 165 GA---KFPIK--------------------------------WTAPEAALYGRFTIKSDV 189
Query: 696 YSFGVILLELLT-GKV 710
+SFG++L EL+T G+V
Sbjct: 190 WSFGILLTELVTKGRV 205
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 78/198 (39%), Gaps = 52/198 (26%)
Query: 519 ETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL----ANARYRKMGSSPCHLP 574
E ++ V+ L HPN+++I + I+ + G L +A+ R S ++
Sbjct: 68 EAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVA 127
Query: 575 WEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP----KIGDFGLERLVTGDT 630
++ K + LA+ H + VH +LKP N+L D P KI DFGL L D
Sbjct: 128 -----ELMKQMMNALAYFHSQHVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDE 181
Query: 631 SSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPN 690
S+ A G+A Y APE +
Sbjct: 182 HSTNAAGTA-------------------------------------LYMAPEVFKR-DVT 203
Query: 691 PKWDVYSFGVILLELLTG 708
K D++S GV++ LLTG
Sbjct: 204 FKCDIWSAGVVMYFLLTG 221
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 23/146 (15%)
Query: 477 KASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVR 535
K S +IL +++KA LE G +RR +V + + L HPN++R
Sbjct: 32 KQSKFILALK---VLFKAQLEKAGVEHQLRR--------------EVEIQSHLRHPNILR 74
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK 595
+ G++ +I ++ P G++ YR++ I + +A L++ H K
Sbjct: 75 LYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITE-LANALSYCHSK 129
Query: 596 KHVHGNLKPRNVLLGNDMEPKIGDFG 621
+ +H ++KP N+LLG+ E KI DFG
Sbjct: 130 RVIHRDIKPENLLLGSAGELKIADFG 155
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 23/146 (15%)
Query: 477 KASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVR 535
K S +IL +++KA LE G +RR +V + + L HPN++R
Sbjct: 31 KQSKFILALK---VLFKAQLEKAGVEHQLRR--------------EVEIQSHLRHPNILR 73
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK 595
+ G++ +I ++ P G++ YR++ I + +A L++ H K
Sbjct: 74 LYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITE-LANALSYCHSK 128
Query: 596 KHVHGNLKPRNVLLGNDMEPKIGDFG 621
+ +H ++KP N+LLG+ E KI DFG
Sbjct: 129 RVIHRDIKPENLLLGSAGELKIADFG 154
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 23/146 (15%)
Query: 477 KASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVR 535
K S +IL +++KA LE G +RR +V + + L HPN++R
Sbjct: 31 KQSKFILALK---VLFKAQLEKAGVEHQLRR--------------EVEIQSHLRHPNILR 73
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK 595
+ G++ +I ++ P G++ YR++ I + +A L++ H K
Sbjct: 74 LYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITE-LANALSYCHSK 128
Query: 596 KHVHGNLKPRNVLLGNDMEPKIGDFG 621
+ +H ++KP N+LLG+ E KI DFG
Sbjct: 129 RVIHRDIKPENLLLGSAGELKIADFG 154
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 46/237 (19%)
Query: 483 LGASGSSIMYKAVL------EDGTALAVRRIGENSVDRFR-DFETQVRVIAKLVHPNLVR 535
LG ++Y+ V E T +A++ + E + R R +F + V+ + ++VR
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN---ARYRKMGSSPCHLP--WEARLKIAKGVARGLA 590
+ G L+I + + G L + + +M ++P P +++A +A G+A
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 591 FLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTAS 650
+L+ K VH +L RN ++ D KIGDFG+ R + +T + GG
Sbjct: 147 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY-ETDYYRKGGKG----------- 194
Query: 651 RDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ +PESL+ DV+SFGV+L E+ T
Sbjct: 195 ----------------------LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 23/146 (15%)
Query: 477 KASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVR 535
K S +IL +++KA LE G +RR +V + + L HPN++R
Sbjct: 30 KQSKFILALK---VLFKAQLEKAGVEHQLRR--------------EVEIQSHLRHPNILR 72
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK 595
+ G++ +I ++ P G++ YR++ I + +A L++ H K
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITE-LANALSYCHSK 127
Query: 596 KHVHGNLKPRNVLLGNDMEPKIGDFG 621
+ +H ++KP N+LLG+ E KI DFG
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 46/237 (19%)
Query: 483 LGASGSSIMYKAVL------EDGTALAVRRIGENSVDRFR-DFETQVRVIAKLVHPNLVR 535
LG ++Y+ V E T +A++ + E + R R +F + V+ + ++VR
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN---ARYRKMGSSPCHLP--WEARLKIAKGVARGLA 590
+ G L+I + + G L + + +M ++P P +++A +A G+A
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 591 FLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTAS 650
+L+ K VH +L RN ++ D KIGDFG+ R + +T + GG
Sbjct: 153 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY-ETDYYRKGGKG----------- 200
Query: 651 RDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ +PESL+ DV+SFGV+L E+ T
Sbjct: 201 ----------------------LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 46/237 (19%)
Query: 483 LGASGSSIMYKAVL------EDGTALAVRRIGENSVDRFR-DFETQVRVIAKLVHPNLVR 535
LG ++Y+ V E T +A++ + E + R R +F + V+ + ++VR
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN---ARYRKMGSSPCHLP--WEARLKIAKGVARGLA 590
+ G L+I + + G L + + +M ++P P +++A +A G+A
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 591 FLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTAS 650
+L+ K VH +L RN ++ D KIGDFG+ R + +T + GG
Sbjct: 146 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY-ETDYYRKGGKG----------- 193
Query: 651 RDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ +PESL+ DV+SFGV+L E+ T
Sbjct: 194 ----------------------LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 99/237 (41%), Gaps = 46/237 (19%)
Query: 483 LGASGSSIMYKAVL------EDGTALAVRRIGENSVDRFR-DFETQVRVIAKLVHPNLVR 535
LG ++Y+ V E T +A++ + E + R R +F + V+ + ++VR
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN---ARYRKMGSSPCHLP--WEARLKIAKGVARGLA 590
+ G L+I + + G L + + M ++P P +++A +A G+A
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 591 FLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTAS 650
+L+ K VH +L RN ++ D KIGDFG+ R + +T + GG
Sbjct: 143 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY-ETDYYRKGGKG----------- 190
Query: 651 RDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ +PESL+ DV+SFGV+L E+ T
Sbjct: 191 ----------------------LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 94/234 (40%), Gaps = 61/234 (26%)
Query: 477 KASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVR 535
K S +IL +++KA LE G +RR +V + + L HPN++R
Sbjct: 33 KQSKFILALK---VLFKAQLEKAGVEHQLRR--------------EVEIQSHLRHPNILR 75
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK 595
+ G++ +I ++ P G++ YR++ I + +A L++ H K
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITE-LANALSYCHSK 130
Query: 596 KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQ 655
+ +H ++KP N+LLG+ E KI DFG S S+R+T
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFGW---------------SVHAPSSRRTTLC----- 170
Query: 656 DLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709
Y PE + + K D++S GV+ E L GK
Sbjct: 171 ------------------GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 23/146 (15%)
Query: 477 KASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVR 535
K S +IL +++KA LE G +RR +V + + L HPN++R
Sbjct: 35 KQSKFILALK---VLFKAQLEKAGVEHQLRR--------------EVEIQSHLRHPNILR 77
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK 595
+ G++ +I ++ P G++ YR++ I + +A L++ H K
Sbjct: 78 LYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITE-LANALSYCHSK 132
Query: 596 KHVHGNLKPRNVLLGNDMEPKIGDFG 621
+ +H ++KP N+LLG+ E KI DFG
Sbjct: 133 RVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 46/237 (19%)
Query: 483 LGASGSSIMYKAVL------EDGTALAVRRIGENSVDRFR-DFETQVRVIAKLVHPNLVR 535
LG ++Y+ V E T +A++ + E + R R +F + V+ + ++VR
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN---ARYRKMGSSPCHLP--WEARLKIAKGVARGLA 590
+ G L+I + + G L + + +M ++P P +++A +A G+A
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 591 FLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTAS 650
+L+ K VH +L RN ++ D KIGDFG+ R + +T + GG
Sbjct: 144 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY-ETDYYRKGGKG----------- 191
Query: 651 RDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ +PESL+ DV+SFGV+L E+ T
Sbjct: 192 ----------------------LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 23/146 (15%)
Query: 477 KASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVR 535
K S +IL +++KA LE G +RR +V + + L HPN++R
Sbjct: 33 KQSKFILALK---VLFKAQLEKAGVEHQLRR--------------EVEIQSHLRHPNILR 75
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK 595
+ G++ +I ++ P G++ YR++ I + +A L++ H K
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITE-LANALSYCHSK 130
Query: 596 KHVHGNLKPRNVLLGNDMEPKIGDFG 621
+ +H ++KP N+LLG+ E KI DFG
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 97/228 (42%), Gaps = 62/228 (27%)
Query: 487 GSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEK 546
G+ + K + D TA A F + V+ +L H NLV++ G V+EK
Sbjct: 35 GNKVAVKCIKNDATAQA--------------FLAEASVMTQLRHSNLVQLLGVI--VEEK 78
Query: 547 ---LIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLK 603
I+ +++ GSL + R G S L + LK + V + +L VH +L
Sbjct: 79 GGLYIVTEYMAKGSLVD-YLRSRGRSV--LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLA 135
Query: 604 PRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXX 663
RNVL+ D K+ DFGL +K +++++D+ +
Sbjct: 136 ARNVLVSEDNVAKVSDFGL---------------------TKEASSTQDTGK-------- 166
Query: 664 XXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKV 710
+ APE+LR + K DV+SFG++L E+ + G+V
Sbjct: 167 ----------LPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRV 204
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 94/234 (40%), Gaps = 61/234 (26%)
Query: 477 KASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVR 535
K S +IL +++KA LE G +RR +V + + L HPN++R
Sbjct: 34 KQSKFILALK---VLFKAQLEKAGVEHQLRR--------------EVEIQSHLRHPNILR 76
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK 595
+ G++ +I ++ P G++ YR++ I + +A L++ H K
Sbjct: 77 LYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITE-LANALSYCHSK 131
Query: 596 KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQ 655
+ +H ++KP N+LLG+ E KI DFG S S+R+T
Sbjct: 132 RVIHRDIKPENLLLGSAGELKIADFGW---------------SVHAPSSRRTTLC----- 171
Query: 656 DLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709
Y PE + + K D++S GV+ E L GK
Sbjct: 172 ------------------GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 23/146 (15%)
Query: 477 KASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVR 535
K S +IL +++KA LE G +RR +V + + L HPN++R
Sbjct: 30 KQSKFILALK---VLFKAQLEKAGVEHQLRR--------------EVEIQSHLRHPNILR 72
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK 595
+ G++ +I ++ P G++ YR++ I + +A L++ H K
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITE-LANALSYCHSK 127
Query: 596 KHVHGNLKPRNVLLGNDMEPKIGDFG 621
+ +H ++KP N+LLG+ E KI DFG
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 46/237 (19%)
Query: 483 LGASGSSIMYKAVL------EDGTALAVRRIGENSVDRFR-DFETQVRVIAKLVHPNLVR 535
LG ++Y+ V E T +A++ + E + R R +F + V+ + ++VR
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN---ARYRKMGSSPCHLP--WEARLKIAKGVARGLA 590
+ G L+I + + G L + + +M ++P P +++A +A G+A
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 591 FLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTAS 650
+L+ K VH +L RN ++ D KIGDFG+ R + +T + GG
Sbjct: 140 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY-ETDYYRKGGKG----------- 187
Query: 651 RDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ +PESL+ DV+SFGV+L E+ T
Sbjct: 188 ----------------------LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 94/234 (40%), Gaps = 61/234 (26%)
Query: 477 KASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVR 535
K S +IL +++KA LE G +RR +V + + L HPN++R
Sbjct: 29 KQSKFILALK---VLFKAQLEKAGVEHQLRR--------------EVEIQSHLRHPNILR 71
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK 595
+ G++ +I ++ P G++ YR++ I + +A L++ H K
Sbjct: 72 LYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITE-LANALSYCHSK 126
Query: 596 KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQ 655
+ +H ++KP N+LLG+ E KI DFG S S+R+T
Sbjct: 127 RVIHRDIKPENLLLGSAGELKIADFGW---------------SVHAPSSRRTTLC----- 166
Query: 656 DLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709
Y PE + + K D++S GV+ E L GK
Sbjct: 167 ------------------GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 93/234 (39%), Gaps = 61/234 (26%)
Query: 477 KASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVR 535
K S +IL +++KA LE G +RR +V + + L HPN++R
Sbjct: 35 KQSKFILALK---VLFKAQLEKAGVEHQLRR--------------EVEIQSHLRHPNILR 77
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK 595
+ G++ +I ++ P G + Y+++ I + +A L++ H K
Sbjct: 78 LYGYFHDATRVYLILEYAPRGEV----YKELQKLSKFDEQRTATYITE-LANALSYCHSK 132
Query: 596 KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQ 655
+ +H ++KP N+LLG+ E KI DFG S S+R+T
Sbjct: 133 RVIHRDIKPENLLLGSAGELKIADFGW---------------SVHAPSSRRTTLC----- 172
Query: 656 DLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709
Y PE + + K D++S GV+ E L GK
Sbjct: 173 ------------------GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 23/146 (15%)
Query: 477 KASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVR 535
K S +IL +++KA LE G +RR +V + + L HPN++R
Sbjct: 30 KQSKFILALK---VLFKAQLEKAGVEHQLRR--------------EVEIQSHLRHPNILR 72
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK 595
+ G++ +I ++ P G++ YR++ I + +A L++ H K
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITE-LANALSYCHSK 127
Query: 596 KHVHGNLKPRNVLLGNDMEPKIGDFG 621
+ +H ++KP N+LLG+ E KI DFG
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 46/237 (19%)
Query: 483 LGASGSSIMYKAVL------EDGTALAVRRIGENSVDRFR-DFETQVRVIAKLVHPNLVR 535
LG ++Y+ V E T +A++ + E + R R +F + V+ + ++VR
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN---ARYRKMGSSPCHLP--WEARLKIAKGVARGLA 590
+ G L+I + + G L + + +M ++P P +++A +A G+A
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 591 FLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTAS 650
+L+ K VH +L RN ++ D KIGDFG+ R + +T + GG
Sbjct: 146 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY-ETDYYRKGGKG----------- 193
Query: 651 RDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ +PESL+ DV+SFGV+L E+ T
Sbjct: 194 ----------------------LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 100/239 (41%), Gaps = 49/239 (20%)
Query: 475 LLKASAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKL-VHPNL 533
+++A+A+ LG + + + TA A D +++++++ L H N+
Sbjct: 54 VVEATAFGLGKEDAVLKVAVKMLKSTAHA---------DEKEALMSELKIMSHLGQHENI 104
Query: 534 VRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGS---SPCHLPWEAR--LKIAKGVARG 588
V + G L+I ++ G L N RK + P E R L + VA+G
Sbjct: 105 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQG 164
Query: 589 LAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRST 648
+AFL K +H ++ RNVLL N KIGDFGL R + D S+ G+AR
Sbjct: 165 MAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND-SNYIVKGNAR-------- 215
Query: 649 ASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ APES+ + DV+S+G++L E+ +
Sbjct: 216 -------------------------LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 46/237 (19%)
Query: 483 LGASGSSIMYKAVL------EDGTALAVRRIGENSVDRFR-DFETQVRVIAKLVHPNLVR 535
LG ++Y+ V E T +A++ + E + R R +F + V+ + ++VR
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN---ARYRKMGSSPCHLP--WEARLKIAKGVARGLA 590
+ G L+I + + G L + + +M ++P P +++A +A G+A
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 591 FLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTAS 650
+L+ K VH +L RN ++ D KIGDFG+ R + +T + GG
Sbjct: 175 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY-ETDYYRKGGKG----------- 222
Query: 651 RDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ +PESL+ DV+SFGV+L E+ T
Sbjct: 223 ----------------------LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 100/239 (41%), Gaps = 49/239 (20%)
Query: 475 LLKASAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKL-VHPNL 533
+++A+A+ LG + + + TA A D +++++++ L H N+
Sbjct: 62 VVEATAFGLGKEDAVLKVAVKMLKSTAHA---------DEKEALMSELKIMSHLGQHENI 112
Query: 534 VRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGS---SPCHLPWEAR--LKIAKGVARG 588
V + G L+I ++ G L N RK + P E R L + VA+G
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQG 172
Query: 589 LAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRST 648
+AFL K +H ++ RNVLL N KIGDFGL R + D S+ G+AR
Sbjct: 173 MAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND-SNYIVKGNAR-------- 223
Query: 649 ASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ APES+ + DV+S+G++L E+ +
Sbjct: 224 -------------------------LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 23/146 (15%)
Query: 477 KASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVR 535
K S +IL +++KA LE G +RR +V + + L HPN++R
Sbjct: 33 KQSKFILALK---VLFKAQLEKAGVEHQLRR--------------EVEIQSHLRHPNILR 75
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK 595
+ G++ +I ++ P G++ YR++ I + +A L++ H K
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITE-LANALSYCHSK 130
Query: 596 KHVHGNLKPRNVLLGNDMEPKIGDFG 621
+ +H ++KP N+LLG+ E KI DFG
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 12/157 (7%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRI--GENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
G+ G +I+ K+ EDG ++ I S + +V V+A + HPN+V+ R +
Sbjct: 35 GSFGKAILVKST-EDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFE 93
Query: 542 GVDEKLIIYDFVPNGSL---ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
I+ D+ G L NA+ + L W ++ +A L +H++K +
Sbjct: 94 ENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA------LKHVHDRKIL 147
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635
H ++K +N+ L D ++GDFG+ R++ ++A
Sbjct: 148 HRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARA 184
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 23/146 (15%)
Query: 477 KASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVR 535
K S +IL +++KA LE G +RR +V + + L HPN++R
Sbjct: 35 KQSKFILALK---VLFKAQLEKAGVEHQLRR--------------EVEIQSHLRHPNILR 77
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK 595
+ G++ +I ++ P G + Y+++ I + +A L++ H K
Sbjct: 78 LYGYFHDATRVYLILEYAPRGEV----YKELQKLSKFDEQRTATYITE-LANALSYCHSK 132
Query: 596 KHVHGNLKPRNVLLGNDMEPKIGDFG 621
+ +H ++KP N+LLG+ E KI DFG
Sbjct: 133 RVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 23/146 (15%)
Query: 477 KASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVR 535
K S +IL +++KA LE G +RR +V + + L HPN++R
Sbjct: 33 KQSKFILALK---VLFKAQLEKAGVEHQLRR--------------EVEIQSHLRHPNILR 75
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK 595
+ G++ +I ++ P G++ YR++ I + +A L++ H K
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITE-LANALSYCHSK 130
Query: 596 KHVHGNLKPRNVLLGNDMEPKIGDFG 621
+ +H ++KP N+LLG+ E KI DFG
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 23/146 (15%)
Query: 477 KASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVR 535
K S +IL +++KA LE G +RR +V + + L HPN++R
Sbjct: 30 KQSKFILALK---VLFKAQLEKAGVEHQLRR--------------EVEIQSHLRHPNILR 72
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK 595
+ G++ +I ++ P G++ YR++ I + +A L++ H K
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITE-LANALSYCHSK 127
Query: 596 KHVHGNLKPRNVLLGNDMEPKIGDFG 621
+ +H ++KP N+LLG+ E KI DFG
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 23/146 (15%)
Query: 477 KASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVR 535
K S +IL +++KA LE G +RR +V + + L HPN++R
Sbjct: 30 KQSKFILALK---VLFKAQLEKAGVEHQLRR--------------EVEIQSHLRHPNILR 72
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK 595
+ G++ +I ++ P G++ YR++ I + +A L++ H K
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITE-LANALSYCHSK 127
Query: 596 KHVHGNLKPRNVLLGNDMEPKIGDFG 621
+ +H ++KP N+LLG+ E KI DFG
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 96/232 (41%), Gaps = 52/232 (22%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRR-IGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
LG +YKA ++ + LA + I S + D+ ++ ++A HPN+V++ ++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 542 GVDEKLIIYDFVPNGSLANARY---RKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
+ I+ +F G++ R + S + + K L +LH+ K +
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-------VCKQTLDALNYLHDNKII 157
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLX 658
H +LK N+L D + K+ DFG+ SA+N R+ RDSF
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGV---------------SAKN---TRTIQRRDSF---- 195
Query: 659 XXXXXXXXXXXXXXXXXXXYHAPESL--RSIKPNP---KWDVYSFGVILLEL 705
+ APE + + K P K DV+S G+ L+E+
Sbjct: 196 --------------IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 23/146 (15%)
Query: 477 KASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVR 535
K S +IL +++KA LE G +RR +V + + L HPN++R
Sbjct: 30 KQSKFILALK---VLFKAQLEKAGVEHQLRR--------------EVEIQSHLRHPNILR 72
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK 595
+ G++ +I ++ P G++ YR++ I + +A L++ H K
Sbjct: 73 LYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITE-LANALSYCHSK 127
Query: 596 KHVHGNLKPRNVLLGNDMEPKIGDFG 621
+ +H ++KP N+LLG+ E KI DFG
Sbjct: 128 RVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 90/196 (45%), Gaps = 44/196 (22%)
Query: 518 FETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNGSLANARYRKMGSSPCHLPW 575
F + +V+ KL H LV++ Y V E+ I+ +++ GSL + + G +L
Sbjct: 57 FLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMNKGSLLDFLKGETGK---YLRL 110
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635
+ ++ +A G+A++ +VH +L+ N+L+G ++ K+ DFGL RL+ + +++
Sbjct: 111 PQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 170
Query: 636 GGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDV 695
G F K + APE+ + K DV
Sbjct: 171 GA---KFPIK--------------------------------WTAPEAALYGRFTIKSDV 195
Query: 696 YSFGVILLELLT-GKV 710
+SFG++L EL T G+V
Sbjct: 196 WSFGILLTELTTKGRV 211
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 95/228 (41%), Gaps = 43/228 (18%)
Query: 483 LGASGSSIMYKAV-LEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
+G S +Y A+ + G +A+R++ + ++ V+ + +PN+V Y
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 542 GVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGN 601
DE ++ +++ GSL + + + C + + + + L FLH + +H +
Sbjct: 88 VGDELWVVMEYLAGGSLTD-----VVTETCMDEGQIA-AVCRECLQALEFLHSNQVIHRD 141
Query: 602 LKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXX 661
+K N+LLG D K+ DFG +T + SKRST +
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQ-------------SKRSTMVGTPY------- 181
Query: 662 XXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709
+ APE + PK D++S G++ +E++ G+
Sbjct: 182 ----------------WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 23/146 (15%)
Query: 477 KASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVR 535
K S +IL +++KA LE G +RR +V + + L HPN++R
Sbjct: 30 KNSKFILALK---VLFKAQLEKAGVEHQLRR--------------EVEIQSHLRHPNILR 72
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK 595
+ G++ +I ++ P G++ YR++ I + +A L++ H K
Sbjct: 73 LYGYFHDSTRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITE-LANALSYCHSK 127
Query: 596 KHVHGNLKPRNVLLGNDMEPKIGDFG 621
K +H ++KP N+LLG+ E KI DFG
Sbjct: 128 KVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 94/234 (40%), Gaps = 61/234 (26%)
Query: 477 KASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVR 535
K S +IL +++KA LE G +RR +V + + L HPN++R
Sbjct: 32 KQSKFILALK---VLFKAQLEKAGVEHQLRR--------------EVEIQSHLRHPNILR 74
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK 595
+ G++ +I ++ P G++ YR++ I + +A L++ H K
Sbjct: 75 LYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITE-LANALSYCHSK 129
Query: 596 KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQ 655
+ +H ++KP N+LLG+ E KI +FG S S+R+T
Sbjct: 130 RVIHRDIKPENLLLGSAGELKIANFGW---------------SVHAPSSRRTTLC----- 169
Query: 656 DLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709
Y PE + + K D++S GV+ E L GK
Sbjct: 170 ------------------GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 90/196 (45%), Gaps = 44/196 (22%)
Query: 518 FETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNGSLANARYRKMGSSPCHLPW 575
F + +V+ KL H LV++ Y V E+ I+ +++ GSL + + G +L
Sbjct: 57 FLQEAQVMKKLRHEKLVQL---YAVVSEEPIYIVTEYMNKGSLLDFLKGETGK---YLRL 110
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635
+ ++ +A G+A++ +VH +L+ N+L+G ++ K+ DFGL RL+ + +++
Sbjct: 111 PQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQ 170
Query: 636 GGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDV 695
G F K + APE+ + K DV
Sbjct: 171 GA---KFPIK--------------------------------WTAPEAALYGRFTIKSDV 195
Query: 696 YSFGVILLELLT-GKV 710
+SFG++L EL T G+V
Sbjct: 196 WSFGILLTELTTKGRV 211
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 102/252 (40%), Gaps = 62/252 (24%)
Query: 475 LLKASAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKL-VHPNL 533
+++A+A+ LG + + + TA A D +++++++ L H N+
Sbjct: 47 VVEATAFGLGKEDAVLKVAVKMLKSTAHA---------DEKEALMSELKIMSHLGQHENI 97
Query: 534 VRIRGFYWGVDEKLIIYDFVPNGSLANARYRKM----------GSSPCHL------PWEA 577
V + G L+I ++ G L N RK G P L P E
Sbjct: 98 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLEL 157
Query: 578 R--LKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635
R L + VA+G+AFL K +H ++ RNVLL N KIGDFGL R + D S+
Sbjct: 158 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND-SNYIV 216
Query: 636 GGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDV 695
G+AR + APES+ + DV
Sbjct: 217 KGNAR---------------------------------LPVKWMAPESIFDCVYTVQSDV 243
Query: 696 YSFGVILLELLT 707
+S+G++L E+ +
Sbjct: 244 WSYGILLWEIFS 255
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 99/237 (41%), Gaps = 46/237 (19%)
Query: 483 LGASGSSIMYKAVL------EDGTALAVRRIGENSVDRFR-DFETQVRVIAKLVHPNLVR 535
LG ++Y+ V E T +A++ + E + R R +F + V+ + ++VR
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN---ARYRKMGSSPCHLP--WEARLKIAKGVARGLA 590
+ G L+I + + G L + + +M ++P P +++A +A G+A
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 591 FLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTAS 650
+L+ K VH +L RN + D KIGDFG+ R + +T + GG
Sbjct: 140 YLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIY-ETDYYRKGGKG----------- 187
Query: 651 RDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ +PESL+ DV+SFGV+L E+ T
Sbjct: 188 ----------------------LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 79/202 (39%), Gaps = 47/202 (23%)
Query: 511 SVDRFRD-FETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSS 569
++++F + ++ ++ L HPN++++ + ++ +F G L +
Sbjct: 85 NIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFD 144
Query: 570 PCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGND---MEPKIGDFGLERLV 626
C I K + G+ +LH+ VH ++KP N+LL N + KI DFGL
Sbjct: 145 ECDAA-----NIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF 199
Query: 627 TGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRS 686
+ D G+A Y APE L+
Sbjct: 200 SKDYKLRDRLGTA-------------------------------------YYIAPEVLKK 222
Query: 687 IKPNPKWDVYSFGVILLELLTG 708
K N K DV+S GVI+ LL G
Sbjct: 223 -KYNEKCDVWSCGVIMYILLCG 243
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+V + + L HPN++R+ G++ +I ++ P G++ YR++
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSRFDEQRTATY 117
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFG 621
I + +A L++ H K+ +H ++KP N+LLG++ E KI DFG
Sbjct: 118 ITE-LANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFG 157
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+V + + L HPN++R+ G++ +I ++ P G++ YR++
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTV----YRELQKLSRFDEQRTATY 117
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFG 621
I + +A L++ H K+ +H ++KP N+LLG++ E KI DFG
Sbjct: 118 ITE-LANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFG 157
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 95/232 (40%), Gaps = 52/232 (22%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRR-IGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
LG +YKA ++ + LA + I S + D+ ++ ++A HPN+V++ ++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 542 GVDEKLIIYDFVPNGSLANARY---RKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
+ I+ +F G++ R + S + + K L +LH+ K +
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-------VCKQTLDALNYLHDNKII 157
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLX 658
H +LK N+L D + K+ DFG+ SA+N R RDSF
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGV---------------SAKN---TRXIQRRDSF---- 195
Query: 659 XXXXXXXXXXXXXXXXXXXYHAPESL--RSIKPNP---KWDVYSFGVILLEL 705
+ APE + + K P K DV+S G+ L+E+
Sbjct: 196 --------------IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 15/161 (9%)
Query: 482 ILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFY 540
++G ++Y+A L D G +A++++ + F++ E Q+ + KL H N+VR+R F+
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKA--FKNRELQI--MRKLDHCNIVRLRYFF 82
Query: 541 WGVDEKL------IIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ EK ++ D+VP AR+ LP + R LA++H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVIYVKLYMYQLFRSLAYIHS 140
Query: 595 KKHVHGNLKPRNVLLGNDMEP-KIGDFG-LERLVTGDTSSS 633
H ++KP+N+LL D K+ DFG ++LV G+ + S
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 94/234 (40%), Gaps = 61/234 (26%)
Query: 477 KASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVR 535
K S +IL +++KA LE G +RR +V + + L HPN++R
Sbjct: 33 KQSKFILALK---VLFKAQLEKAGVEHQLRR--------------EVEIQSHLRHPNILR 75
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK 595
+ G++ +I ++ P G++ YR++ I + +A L++ H K
Sbjct: 76 LYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITE-LANALSYCHSK 130
Query: 596 KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQ 655
+ +H ++KP N+LLG+ E KI +FG S S+R+T
Sbjct: 131 RVIHRDIKPENLLLGSAGELKIANFGW---------------SVHAPSSRRTTLC----- 170
Query: 656 DLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709
Y PE + + K D++S GV+ E L GK
Sbjct: 171 ------------------GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 93/234 (39%), Gaps = 61/234 (26%)
Query: 477 KASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVR 535
K +IL +++KA LE G +RR +V + + L HPN++R
Sbjct: 27 KQRKFILALK---VLFKAQLEKAGVEHQLRR--------------EVEIQSHLRHPNILR 69
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK 595
+ G++ +I ++ P G++ YR++ I + +A L++ H K
Sbjct: 70 LYGYFHDATRVYLILEYAPLGTV----YRELQKLSKFDEQRTATYITE-LANALSYCHSK 124
Query: 596 KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQ 655
+ +H ++KP N+LLG+ E KI DF G S S+R+T
Sbjct: 125 RVIHRDIKPENLLLGSAGELKIADF---------------GWSVHAPSSRRTTLC----- 164
Query: 656 DLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709
Y PE + + K D++S GV+ E L GK
Sbjct: 165 ------------------GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 6/162 (3%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
LGA ++ A T +AV+ + S+ F + V+ L H LV++
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMS-VEAFLAEANVMKTLQHDKLVKLHAVV-T 247
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ II +F+ GSL + GS P + + +A G+AF+ ++ ++H +L
Sbjct: 248 KEPIYIITEFMAKGSLLDFLKSDEGSKQ---PLPKLIDFSAQIAEGMAFIEQRNYIHRDL 304
Query: 603 KPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ N+L+ + KI DFGL R V A NFGS
Sbjct: 305 RAANILVSASLVCKIADFGLAR-VGAKFPIKWTAPEAINFGS 345
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN--ARYRKMGSSPCHLP 574
DF + +I+KL H N+VR G + I+ + + G L + R S P L
Sbjct: 94 DFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 153
Query: 575 WEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLL---GNDMEPKIGDFGLERLVTGDTS 631
L +A+ +A G +L E +H ++ RN LL G KIGDFG+ R + S
Sbjct: 154 MLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY-RAS 212
Query: 632 SSKAGGSA 639
+ GG A
Sbjct: 213 YYRKGGCA 220
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 15/161 (9%)
Query: 482 ILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFY 540
++G ++Y+A L D G +A++++ + + R+ + ++ KL H N+VR+R F+
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQ----IMRKLDHCNIVRLRYFF 82
Query: 541 WGVDEKL------IIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ EK ++ D+VP AR+ LP + R LA++H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQ--TLPVIYVKLYMYQLFRSLAYIHS 140
Query: 595 KKHVHGNLKPRNVLLGNDMEP-KIGDFG-LERLVTGDTSSS 633
H ++KP+N+LL D K+ DFG ++LV G+ + S
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS 181
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 107/254 (42%), Gaps = 55/254 (21%)
Query: 466 GDKELELETLLKASAYILGASGSSIMYKAVLEDGTALAVRRIGENS-VDRFRDFETQVRV 524
D E+E E + + L G + K+V+ + + GE +++F++F+ +V +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 525 IAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKG 584
++ L HPN+V++ G + ++ +FVP G L Y ++ + W +L++
Sbjct: 77 MSNLNHPNIVKLYGLMH--NPPRMVMEFVPCGDL----YHRLLDKAHPIKWSVKLRLMLD 130
Query: 585 VARGLAFLHEKKH--VHGNLKPRNVLLGNDME-----PKIGDFGLERLVTGDTSSSKAGG 637
+A G+ ++ + VH +L+ N+ L + E K+ DF L + S G
Sbjct: 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSG 185
Query: 638 SARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPN--PKWDV 695
NF + APE++ + + + K D
Sbjct: 186 LLGNF----------------------------------QWMAPETIGAEEESYTEKADT 211
Query: 696 YSFGVILLELLTGK 709
YSF +IL +LTG+
Sbjct: 212 YSFAMILYTILTGE 225
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 59/128 (46%), Gaps = 6/128 (4%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN--ARYRKMGSSPCHLP 574
DF + +I+KL H N+VR G + I+ + + G L + R S P L
Sbjct: 80 DFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 139
Query: 575 WEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLL---GNDMEPKIGDFGLERLVTGDTS 631
L +A+ +A G +L E +H ++ RN LL G KIGDFG+ R + S
Sbjct: 140 MLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY-RAS 198
Query: 632 SSKAGGSA 639
+ GG A
Sbjct: 199 YYRKGGCA 206
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 100/243 (41%), Gaps = 53/243 (21%)
Query: 475 LLKASAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKL-VHPNL 533
+++A+A+ LG + + + TA A D +++++++ L H N+
Sbjct: 62 VVEATAFGLGKEDAVLKVAVKMLKSTAHA---------DEKEALMSELKIMSHLGQHENI 112
Query: 534 VRIRGFYWGVDEKLIIYDFVPNGSLANARYRK---MGSSPCH------LPWEARLKIAKG 584
V + G L+I ++ G L N RK + + P L L +
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQ 172
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
VA+G+AFL K +H ++ RNVLL N KIGDFGL R + D S+ G+AR
Sbjct: 173 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND-SNYIVKGNAR---- 227
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
+ APES+ + DV+S+G++L E
Sbjct: 228 -----------------------------LPVKWMAPESIFDCVYTVQSDVWSYGILLWE 258
Query: 705 LLT 707
+ +
Sbjct: 259 IFS 261
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 20/135 (14%)
Query: 507 IGENSV---DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLII-YDFVPNGSLANAR 562
I EN V R RD V+++L HP V++ F + DEKL + NG L
Sbjct: 68 IKENKVPYVTRERD------VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKY- 119
Query: 563 YRKMGS--SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDF 620
RK+GS C R A+ V+ L +LH K +H +LKP N+LL DM +I DF
Sbjct: 120 IRKIGSFDETC-----TRFYTAEIVS-ALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 173
Query: 621 GLERLVTGDTSSSKA 635
G ++++ ++ ++A
Sbjct: 174 GTAKVLSPESKQARA 188
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 20/185 (10%)
Query: 482 ILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFY 540
++G ++Y+A L D G +A++++ + + R+ + ++ KL H N+VR+R F+
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQ----IMRKLDHCNIVRLRYFF 82
Query: 541 WGVDEKL------IIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ EK ++ D+VP AR+ LP + R LA++H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQ--TLPVIYVKLYMYQLFRSLAYIHS 140
Query: 595 KKHVHGNLKPRNVLLGNDMEP-KIGDFG-LERLVTGDTSSSKAGGSARN-----FGSKRS 647
H ++KP+N+LL D K+ DFG ++LV G+ + S FG+
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDY 200
Query: 648 TASRD 652
T+S D
Sbjct: 201 TSSID 205
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 20/135 (14%)
Query: 507 IGENSV---DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLII-YDFVPNGSLANAR 562
I EN V R RD V+++L HP V++ F + DEKL + NG L
Sbjct: 68 IKENKVPYVTRERD------VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKY- 119
Query: 563 YRKMGS--SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDF 620
RK+GS C R A+ V+ L +LH K +H +LKP N+LL DM +I DF
Sbjct: 120 IRKIGSFDETC-----TRFYTAEIVS-ALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 173
Query: 621 GLERLVTGDTSSSKA 635
G ++++ ++ ++A
Sbjct: 174 GTAKVLSPESKQARA 188
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 20/135 (14%)
Query: 507 IGENSV---DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLII-YDFVPNGSLANAR 562
I EN V R RD V+++L HP V++ F + DEKL + NG L
Sbjct: 69 IKENKVPYVTRERD------VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLK-Y 120
Query: 563 YRKMGS--SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDF 620
RK+GS C + A + L +LH K +H +LKP N+LL DM +I DF
Sbjct: 121 IRKIGSFDETCTRFYTAE------IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 174
Query: 621 GLERLVTGDTSSSKA 635
G ++++ ++ ++A
Sbjct: 175 GTAKVLSPESKQARA 189
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 20/135 (14%)
Query: 507 IGENSV---DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLII-YDFVPNGSLANAR 562
I EN V R RD V+++L HP V++ F + DEKL + NG L
Sbjct: 69 IKENKVPYVTRERD------VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKY- 120
Query: 563 YRKMGS--SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDF 620
RK+GS C R A+ V+ L +LH K +H +LKP N+LL DM +I DF
Sbjct: 121 IRKIGSFDETC-----TRFYTAEIVS-ALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 174
Query: 621 GLERLVTGDTSSSKA 635
G ++++ ++ ++A
Sbjct: 175 GTAKVLSPESKQARA 189
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 20/135 (14%)
Query: 507 IGENSV---DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLII-YDFVPNGSLANAR 562
I EN V R RD V+++L HP V++ F + DEKL + NG L
Sbjct: 47 IKENKVPYVTRERD------VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKY- 98
Query: 563 YRKMGS--SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDF 620
RK+GS C R A+ V+ L +LH K +H +LKP N+LL DM +I DF
Sbjct: 99 IRKIGSFDETC-----TRFYTAEIVS-ALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 152
Query: 621 GLERLVTGDTSSSKA 635
G ++++ ++ ++A
Sbjct: 153 GTAKVLSPESKQARA 167
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 20/135 (14%)
Query: 507 IGENSV---DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLII-YDFVPNGSLANAR 562
I EN V R RD V+++L HP V++ F + DEKL + NG L
Sbjct: 46 IKENKVPYVTRERD------VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKY- 97
Query: 563 YRKMGS--SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDF 620
RK+GS C R A+ V+ L +LH K +H +LKP N+LL DM +I DF
Sbjct: 98 IRKIGSFDETC-----TRFYTAEIVS-ALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 151
Query: 621 GLERLVTGDTSSSKA 635
G ++++ ++ ++A
Sbjct: 152 GTAKVLSPESKQARA 166
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 20/135 (14%)
Query: 507 IGENSV---DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLII-YDFVPNGSLANAR 562
I EN V R RD V+++L HP V++ F + DEKL + NG L
Sbjct: 72 IKENKVPYVTRERD------VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKY- 123
Query: 563 YRKMGS--SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDF 620
RK+GS C + A + L +LH K +H +LKP N+LL DM +I DF
Sbjct: 124 IRKIGSFDETCTRFYTAE------IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 177
Query: 621 GLERLVTGDTSSSKA 635
G ++++ ++ ++A
Sbjct: 178 GTAKVLSPESKQARA 192
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 20/135 (14%)
Query: 507 IGENSV---DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLII-YDFVPNGSLANAR 562
I EN V R RD V+++L HP V++ F + DEKL + NG L
Sbjct: 69 IKENKVPYVTRERD------VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKY- 120
Query: 563 YRKMGS--SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDF 620
RK+GS C + A + L +LH K +H +LKP N+LL DM +I DF
Sbjct: 121 IRKIGSFDETCTRFYTAE------IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 174
Query: 621 GLERLVTGDTSSSKA 635
G ++++ ++ ++A
Sbjct: 175 GTAKVLSPESKQARA 189
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 20/135 (14%)
Query: 507 IGENSV---DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLII-YDFVPNGSLANAR 562
I EN V R RD V+++L HP V++ F + DEKL + NG L
Sbjct: 71 IKENKVPYVTRERD------VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKY- 122
Query: 563 YRKMGS--SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDF 620
RK+GS C + A + L +LH K +H +LKP N+LL DM +I DF
Sbjct: 123 IRKIGSFDETCTRFYTAE------IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 176
Query: 621 GLERLVTGDTSSSKA 635
G ++++ ++ ++A
Sbjct: 177 GTAKVLSPESKQARA 191
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 20/135 (14%)
Query: 507 IGENSV---DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLII-YDFVPNGSLANAR 562
I EN V R RD V+++L HP V++ F + DEKL + NG L
Sbjct: 49 IKENKVPYVTRERD------VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKY- 100
Query: 563 YRKMGS--SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDF 620
RK+GS C R A+ V+ L +LH K +H +LKP N+LL DM +I DF
Sbjct: 101 IRKIGSFDETC-----TRFYTAEIVS-ALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 154
Query: 621 GLERLVTGDTSSSKA 635
G ++++ ++ ++A
Sbjct: 155 GTAKVLSPESKQARA 169
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 20/135 (14%)
Query: 507 IGENSV---DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLII-YDFVPNGSLANAR 562
I EN V R RD V+++L HP V++ F + DEKL + NG L
Sbjct: 53 IKENKVPYVTRERD------VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKY- 104
Query: 563 YRKMGS--SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDF 620
RK+GS C R A+ V+ L +LH K +H +LKP N+LL DM +I DF
Sbjct: 105 IRKIGSFDETC-----TRFYTAEIVS-ALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 158
Query: 621 GLERLVTGDTSSSKA 635
G ++++ ++ ++A
Sbjct: 159 GTAKVLSPESKQARA 173
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 20/135 (14%)
Query: 507 IGENSV---DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLII-YDFVPNGSLANAR 562
I EN V R RD V+++L HP V++ F + DEKL + NG L
Sbjct: 48 IKENKVPYVTRERD------VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKY- 99
Query: 563 YRKMGS--SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDF 620
RK+GS C R A+ V+ L +LH K +H +LKP N+LL DM +I DF
Sbjct: 100 IRKIGSFDETC-----TRFYTAEIVS-ALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 153
Query: 621 GLERLVTGDTSSSKA 635
G ++++ ++ ++A
Sbjct: 154 GTAKVLSPESKQARA 168
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 20/135 (14%)
Query: 507 IGENSV---DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLII-YDFVPNGSLANAR 562
I EN V R RD V+++L HP V++ F + DEKL + NG L
Sbjct: 71 IKENKVPYVTRERD------VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGCLLKY- 122
Query: 563 YRKMGS--SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDF 620
RK+GS C + A + L +LH K +H +LKP N+LL DM +I DF
Sbjct: 123 IRKIGSFDETCTRFYTAE------IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 176
Query: 621 GLERLVTGDTSSSKA 635
G ++++ ++ ++A
Sbjct: 177 GTAKVLSPESKQARA 191
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 20/135 (14%)
Query: 507 IGENSV---DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLII-YDFVPNGSLANAR 562
I EN V R RD V+++L HP V++ F + DEKL + NG L
Sbjct: 69 IKENKVPYVTRERD------VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKY- 120
Query: 563 YRKMGS--SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDF 620
RK+GS C R A+ V+ L +LH K +H +LKP N+LL DM +I DF
Sbjct: 121 IRKIGSFDETC-----TRFYTAEIVS-ALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 174
Query: 621 GLERLVTGDTSSSKA 635
G ++++ ++ ++A
Sbjct: 175 GTAKVLSPESKQARA 189
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 20/135 (14%)
Query: 507 IGENSV---DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLII-YDFVPNGSLANAR 562
I EN V R RD V+++L HP V++ F + DEKL + NG L
Sbjct: 71 IKENKVPYVTRERD------VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKY- 122
Query: 563 YRKMGS--SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDF 620
RK+GS C + A + L +LH K +H +LKP N+LL DM +I DF
Sbjct: 123 IRKIGSFDETCTRFYTAE------IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 176
Query: 621 GLERLVTGDTSSSKA 635
G ++++ ++ ++A
Sbjct: 177 GTAKVLSPESKQARA 191
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 20/135 (14%)
Query: 507 IGENSV---DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLII-YDFVPNGSLANAR 562
I EN V R RD V+++L HP V++ F + DEKL + NG L
Sbjct: 74 IKENKVPYVTRERD------VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLK-Y 125
Query: 563 YRKMGS--SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDF 620
RK+GS C + A + L +LH K +H +LKP N+LL DM +I DF
Sbjct: 126 IRKIGSFDETCTRFYTAE------IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 179
Query: 621 GLERLVTGDTSSSKA 635
G ++++ ++ ++A
Sbjct: 180 GTAKVLSPESKQARA 194
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 20/135 (14%)
Query: 507 IGENSV---DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLII-YDFVPNGSLANAR 562
I EN V R RD V+++L HP V++ F + DEKL + NG L
Sbjct: 72 IKENKVPYVTRERD------VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKY- 123
Query: 563 YRKMGS--SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDF 620
RK+GS C + A + L +LH K +H +LKP N+LL DM +I DF
Sbjct: 124 IRKIGSFDETCTRFYTAE------IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 177
Query: 621 GLERLVTGDTSSSKA 635
G ++++ ++ ++A
Sbjct: 178 GTAKVLSPESKQARA 192
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 17/127 (13%)
Query: 512 VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLII-YDFVPNGSLANARYRKMGS-- 568
V R RD V+++L HP V++ F + DEKL + NG L RK+GS
Sbjct: 79 VTRERD------VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLK-YIRKIGSFD 130
Query: 569 SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTG 628
C + A + L +LH K +H +LKP N+LL DM +I DFG ++++
Sbjct: 131 ETCTRFYTAE------IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184
Query: 629 DTSSSKA 635
++ ++A
Sbjct: 185 ESKQARA 191
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 20/135 (14%)
Query: 507 IGENSV---DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLII-YDFVPNGSLANAR 562
I EN V R RD V+++L HP V++ F + DEKL + NG L
Sbjct: 71 IKENKVPYVTRERD------VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKY- 122
Query: 563 YRKMGS--SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDF 620
RK+GS C + A + L +LH K +H +LKP N+LL DM +I DF
Sbjct: 123 IRKIGSFDETCTRFYTAE------IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 176
Query: 621 GLERLVTGDTSSSKA 635
G ++++ ++ ++A
Sbjct: 177 GTAKVLSPESKQARA 191
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 75/191 (39%), Gaps = 46/191 (24%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+V V+ L HPN++++ F+ ++ + G L + +M +
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV----- 140
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGN---DMEPKIGDFGLERLVTGDTSSSKAGG 637
I K V G+ +LH+ VH +LKP N+LL + D KI DFGL + + G
Sbjct: 141 IIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLG 200
Query: 638 SARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYS 697
+A Y APE LR K + K DV+S
Sbjct: 201 TA-------------------------------------YYIAPEVLRK-KYDEKCDVWS 222
Query: 698 FGVILLELLTG 708
GVIL LL G
Sbjct: 223 IGVILFILLAG 233
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 20/135 (14%)
Query: 507 IGENSV---DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLII-YDFVPNGSLANAR 562
I EN V R RD V+++L HP V++ F + DEKL + NG L
Sbjct: 71 IKENKVPYVTRERD------VMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLK-Y 122
Query: 563 YRKMGS--SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDF 620
RK+GS C + A + L +LH K +H +LKP N+LL DM +I DF
Sbjct: 123 IRKIGSFDETCTRFYTAE------IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 176
Query: 621 GLERLVTGDTSSSKA 635
G ++++ ++ ++A
Sbjct: 177 GTAKVLSPESKQARA 191
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 20/135 (14%)
Query: 507 IGENSV---DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLII-YDFVPNGSLANAR 562
I EN V R RD V+++L HP V++ F + DEKL + NG L
Sbjct: 76 IKENKVPYVTRERD------VMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKY- 127
Query: 563 YRKMGS--SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDF 620
RK+GS C R A+ + L +LH K +H +LKP N+LL DM +I DF
Sbjct: 128 IRKIGSFDETC-----TRFYTAE-IVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 181
Query: 621 GLERLVTGDTSSSKA 635
G ++++ ++ ++A
Sbjct: 182 GTAKVLSPESKQARA 196
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 94/228 (41%), Gaps = 43/228 (18%)
Query: 483 LGASGSSIMYKAV-LEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
+G S +Y A+ + G +A+R++ + ++ V+ + +PN+V Y
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 542 GVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGN 601
DE ++ +++ GSL + + + C + + + + L FLH + +H +
Sbjct: 88 VGDELWVVMEYLAGGSLTD-----VVTETCMDEGQIA-AVCRECLQALEFLHSNQVIHRD 141
Query: 602 LKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXX 661
+K N+LLG D K+ DFG +T + SKRS +
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQ-------------SKRSEMVGTPY------- 181
Query: 662 XXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709
+ APE + PK D++S G++ +E++ G+
Sbjct: 182 ----------------WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN--ARYRKMGSSPCHLP 574
DF + +I+K H N+VR G + I+ + + G L + R S P L
Sbjct: 94 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLA 153
Query: 575 WEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLL---GNDMEPKIGDFGLERLVTGDTS 631
L +A+ +A G +L E +H ++ RN LL G KIGDFG+ R + S
Sbjct: 154 MLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY-RAS 212
Query: 632 SSKAGGSA 639
+ GG A
Sbjct: 213 YYRKGGCA 220
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN--ARYRKMGSSPCHLP 574
DF + +I+K H N+VR G + I+ + + G L + R S P L
Sbjct: 96 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 155
Query: 575 WEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLL---GNDMEPKIGDFGLERLVTGDTS 631
L +A+ +A G +L E +H ++ RN LL G KIGDFG+ R + S
Sbjct: 156 MLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY-RAS 214
Query: 632 SSKAGGSA 639
+ GG A
Sbjct: 215 YYRKGGCA 222
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN--ARYRKMGSSPCHLP 574
DF + +I+K H N+VR G + I+ + + G L + R S P L
Sbjct: 86 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 145
Query: 575 WEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLL---GNDMEPKIGDFGLERLVTGDTS 631
L +A+ +A G +L E +H ++ RN LL G KIGDFG+ R + S
Sbjct: 146 MLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY-RAS 204
Query: 632 SSKAGGSA 639
+ GG A
Sbjct: 205 YYRKGGCA 212
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 94/228 (41%), Gaps = 43/228 (18%)
Query: 483 LGASGSSIMYKAV-LEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
+G S +Y A+ + G +A+R++ + ++ V+ + +PN+V Y
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 542 GVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGN 601
DE ++ +++ GSL + + + C + + + + L FLH + +H +
Sbjct: 88 VGDELWVVMEYLAGGSLTD-----VVTETCMDEGQIA-AVCRECLQALEFLHSNQVIHRD 141
Query: 602 LKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXX 661
+K N+LLG D K+ DFG +T + SKRS +
Sbjct: 142 IKSDNILLGMDGSVKLTDFGFCAQITPEQ-------------SKRSXMVGTPY------- 181
Query: 662 XXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709
+ APE + PK D++S G++ +E++ G+
Sbjct: 182 ----------------WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 99/265 (37%), Gaps = 61/265 (23%)
Query: 530 HPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARL---------- 579
H N+V + G L+I ++ G L N RK S C A +
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 145
Query: 580 ---KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636
+ VA+G+AFL K +H +L RN+LL + KI DFGL R + D S+
Sbjct: 146 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND-SNYVVK 204
Query: 637 GSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVY 696
G+AR + APES+ + + DV+
Sbjct: 205 GNAR---------------------------------LPVKWMAPESIFNCVYTFESDVW 231
Query: 697 SFGVILLELLTGKVIVVDELGQG--NGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFK 754
S+G+ L EL + LG G+ V+ K E A +
Sbjct: 232 SYGIFLWELFS--------LGSSPYPGMPVDSK----FYKMIKEGFRMLSPEHAPAEMYD 279
Query: 755 LGYSCASPLPQKRPSMKEALQALEK 779
+ +C P KRP+ K+ +Q +EK
Sbjct: 280 IMKTCWDADPLKRPTFKQIVQLIEK 304
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 6/121 (4%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+++ ++ L HP LV + + +E ++IY+F+ G L + K+ + + ++
Sbjct: 98 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL----FEKVADEHNKMSEDEAVE 153
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDM--EPKIGDFGLERLVTGDTSSSKAGGS 638
+ V +GL +HE +VH +LKP N++ E K+ DFGL + S G+
Sbjct: 154 YMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGT 213
Query: 639 A 639
A
Sbjct: 214 A 214
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN--ARYRKMGSSPCHLP 574
DF + +I+K H N+VR G + I+ + + G L + R S P L
Sbjct: 94 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 153
Query: 575 WEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLL---GNDMEPKIGDFGLERLVTGDTS 631
L +A+ +A G +L E +H ++ RN LL G KIGDFG+ R + S
Sbjct: 154 MLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY-RAS 212
Query: 632 SSKAGGSA 639
+ GG A
Sbjct: 213 YYRKGGCA 220
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 99/265 (37%), Gaps = 61/265 (23%)
Query: 530 HPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARL---------- 579
H N+V + G L+I ++ G L N RK S C A +
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 580 ---KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636
+ VA+G+AFL K +H +L RN+LL + KI DFGL R + D S+
Sbjct: 169 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKND-SNYVVK 227
Query: 637 GSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVY 696
G+AR + APES+ + + DV+
Sbjct: 228 GNAR---------------------------------LPVKWMAPESIFNCVYTFESDVW 254
Query: 697 SFGVILLELLTGKVIVVDELGQG--NGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFK 754
S+G+ L EL + LG G+ V+ K E A +
Sbjct: 255 SYGIFLWELFS--------LGSSPYPGMPVDSK----FYKMIKEGFRMLSPEHAPAEMYD 302
Query: 755 LGYSCASPLPQKRPSMKEALQALEK 779
+ +C P KRP+ K+ +Q +EK
Sbjct: 303 IMKTCWDADPLKRPTFKQIVQLIEK 327
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 94/228 (41%), Gaps = 43/228 (18%)
Query: 483 LGASGSSIMYKAV-LEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
+G S +Y A+ + G +A+R++ + ++ V+ + +PN+V Y
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 542 GVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGN 601
DE ++ +++ GSL + + + C + + + + L FLH + +H +
Sbjct: 89 VGDELWVVMEYLAGGSLTD-----VVTETCMDEGQIA-AVCRECLQALEFLHSNQVIHRD 142
Query: 602 LKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXX 661
+K N+LLG D K+ DFG +T + SKRS +
Sbjct: 143 IKSDNILLGMDGSVKLTDFGFCAQITPEQ-------------SKRSXMVGTPY------- 182
Query: 662 XXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709
+ APE + PK D++S G++ +E++ G+
Sbjct: 183 ----------------WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN--ARYRKMGSSPCHLP 574
DF + +I+K H N+VR G + I+ + + G L + R S P L
Sbjct: 80 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 139
Query: 575 WEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLL---GNDMEPKIGDFGLERLVTGDTS 631
L +A+ +A G +L E +H ++ RN LL G KIGDFG+ R + S
Sbjct: 140 MLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY-RAS 198
Query: 632 SSKAGGSA 639
+ GG A
Sbjct: 199 YYRKGGCA 206
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN--ARYRKMGSSPCHLP 574
DF + +I+K H N+VR G + I+ + + G L + R S P L
Sbjct: 106 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 165
Query: 575 WEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLL---GNDMEPKIGDFGLERLVTGDTS 631
L +A+ +A G +L E +H ++ RN LL G KIGDFG+ R + S
Sbjct: 166 MLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY-RAS 224
Query: 632 SSKAGGSA 639
+ GG A
Sbjct: 225 YYRKGGCA 232
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN--ARYRKMGSSPCHLP 574
DF + +I+K H N+VR G + I+ + + G L + R S P L
Sbjct: 79 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLA 138
Query: 575 WEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLL---GNDMEPKIGDFGLERLVTGDTS 631
L +A+ +A G +L E +H ++ RN LL G KIGDFG+ R + S
Sbjct: 139 MLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY-RAS 197
Query: 632 SSKAGGSA 639
+ GG A
Sbjct: 198 YYRKGGCA 205
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN--ARYRKMGSSPCHLP 574
DF + +I+K H N+VR G + I+ + + G L + R S P L
Sbjct: 79 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 138
Query: 575 WEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLL---GNDMEPKIGDFGLERLVTGDTS 631
L +A+ +A G +L E +H ++ RN LL G KIGDFG+ R + S
Sbjct: 139 MLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY-RAS 197
Query: 632 SSKAGGSA 639
+ GG A
Sbjct: 198 YYRKGGCA 205
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 99/265 (37%), Gaps = 61/265 (23%)
Query: 530 HPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARL---------- 579
H N+V + G L+I ++ G L N RK S C A +
Sbjct: 102 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 161
Query: 580 ---KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636
+ VA+G+AFL K +H +L RN+LL + KI DFGL R + D S+
Sbjct: 162 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND-SNYVVK 220
Query: 637 GSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVY 696
G+AR + APES+ + + DV+
Sbjct: 221 GNAR---------------------------------LPVKWMAPESIFNCVYTFESDVW 247
Query: 697 SFGVILLELLTGKVIVVDELGQG--NGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFK 754
S+G+ L EL + LG G+ V+ K E A +
Sbjct: 248 SYGIFLWELFS--------LGSSPYPGMPVDSK----FYKMIKEGFRMLSPEHAPAEMYD 295
Query: 755 LGYSCASPLPQKRPSMKEALQALEK 779
+ +C P KRP+ K+ +Q +EK
Sbjct: 296 IMKTCWDADPLKRPTFKQIVQLIEK 320
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 100/243 (41%), Gaps = 53/243 (21%)
Query: 475 LLKASAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKL-VHPNL 533
+++A+A+ LG + + + TA A D +++++++ L H N+
Sbjct: 62 VVEATAFGLGKEDAVLKVAVKMLKSTAHA---------DEKEALMSELKIMSHLGQHENI 112
Query: 534 VRIRGFYWGVDEKLIIYDFVPNGSLANARYRK---MGSSPCHLPWEAR------LKIAKG 584
V + G L+I ++ G L N RK + + P + L +
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQ 172
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
VA+G+AFL K +H ++ RNVLL N KIGDFGL R + D S+ G+AR
Sbjct: 173 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND-SNYIVKGNAR---- 227
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
+ APES+ + DV+S+G++L E
Sbjct: 228 -----------------------------LPVKWMAPESIFDCVYTVQSDVWSYGILLWE 258
Query: 705 LLT 707
+ +
Sbjct: 259 IFS 261
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN--ARYRKMGSSPCHLP 574
DF + +I+K H N+VR G + I+ + + G L + R S P L
Sbjct: 71 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 130
Query: 575 WEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLL---GNDMEPKIGDFGLERLVTGDTS 631
L +A+ +A G +L E +H ++ RN LL G KIGDFG+ R + S
Sbjct: 131 MLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY-RAS 189
Query: 632 SSKAGGSA 639
+ GG A
Sbjct: 190 YYRKGGCA 197
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 94/232 (40%), Gaps = 52/232 (22%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRR-IGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
LG +YKA ++ + LA + I S + D+ ++ ++A HPN+V++ ++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 542 GVDEKLIIYDFVPNGSLANARY---RKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
+ I+ +F G++ R + S + + K L +LH+ K +
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-------VCKQTLDALNYLHDNKII 157
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLX 658
H +LK N+L D + K+ DFG+ SA+N R RD F
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGV---------------SAKN---TRXIQRRDXF---- 195
Query: 659 XXXXXXXXXXXXXXXXXXXYHAPESL--RSIKPNP---KWDVYSFGVILLEL 705
+ APE + + K P K DV+S G+ L+E+
Sbjct: 196 --------------IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 6/121 (4%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+++ ++ L HP LV + + +E ++IY+F+ G L + K+ + + ++
Sbjct: 204 EIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL----FEKVADEHNKMSEDEAVE 259
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDM--EPKIGDFGLERLVTGDTSSSKAGGS 638
+ V +GL +HE +VH +LKP N++ E K+ DFGL + S G+
Sbjct: 260 YMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGT 319
Query: 639 A 639
A
Sbjct: 320 A 320
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 99/265 (37%), Gaps = 61/265 (23%)
Query: 530 HPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARL---------- 579
H N+V + G L+I ++ G L N RK S C A +
Sbjct: 104 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 163
Query: 580 ---KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636
+ VA+G+AFL K +H +L RN+LL + KI DFGL R + D S+
Sbjct: 164 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND-SNYVVK 222
Query: 637 GSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVY 696
G+AR + APES+ + + DV+
Sbjct: 223 GNAR---------------------------------LPVKWMAPESIFNCVYTFESDVW 249
Query: 697 SFGVILLELLTGKVIVVDELGQG--NGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFK 754
S+G+ L EL + LG G+ V+ K E A +
Sbjct: 250 SYGIFLWELFS--------LGSSPYPGMPVDSK----FYKMIKEGFRMLSPEHAPAEMYD 297
Query: 755 LGYSCASPLPQKRPSMKEALQALEK 779
+ +C P KRP+ K+ +Q +EK
Sbjct: 298 IMKTCWDADPLKRPTFKQIVQLIEK 322
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 21/151 (13%)
Query: 483 LGASGSSIMYKAVLED-GTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGF 539
LG S++ + V + G A + I S F+ E + R+ KL HPN+VR+
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 96
Query: 540 YWGVDEKLIIYDFVPNGSL-----ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+++D V G L A Y + +S C + + +A+ H
Sbjct: 97 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHC----------IQQILESIAYCHS 146
Query: 595 KKHVHGNLKPRNVLLGNDME---PKIGDFGL 622
VH NLKP N+LL + + K+ DFGL
Sbjct: 147 NGIVHRNLKPENLLLASKAKGAAVKLADFGL 177
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 64/120 (53%), Gaps = 14/120 (11%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARY--RKMGSSPCHLP 574
+ ET++ ++ KL HP +++I+ F+ ++ I+ + + G L + +++ + C L
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 119
Query: 575 WEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP---KIGDFGLERLVTGDTS 631
+ L + +LHE +H +LKP NVLL + E KI DFG +++ G+TS
Sbjct: 120 FYQML-------LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETS 171
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 64/120 (53%), Gaps = 14/120 (11%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARY--RKMGSSPCHLP 574
+ ET++ ++ KL HP +++I+ F+ ++ I+ + + G L + +++ + C L
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 119
Query: 575 WEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP---KIGDFGLERLVTGDTS 631
+ L + +LHE +H +LKP NVLL + E KI DFG +++ G+TS
Sbjct: 120 FYQML-------LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETS 171
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 64/120 (53%), Gaps = 14/120 (11%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARY--RKMGSSPCHLP 574
+ ET++ ++ KL HP +++I+ F+ ++ I+ + + G L + +++ + C L
Sbjct: 60 NVETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 118
Query: 575 WEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP---KIGDFGLERLVTGDTS 631
+ L + +LHE +H +LKP NVLL + E KI DFG +++ G+TS
Sbjct: 119 FYQML-------LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETS 170
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 99/265 (37%), Gaps = 61/265 (23%)
Query: 530 HPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARL---------- 579
H N+V + G L+I ++ G L N RK S C A +
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 580 ---KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636
+ VA+G+AFL K +H +L RN+LL + KI DFGL R + D S+
Sbjct: 169 DLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND-SNYVVK 227
Query: 637 GSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVY 696
G+AR + APES+ + + DV+
Sbjct: 228 GNAR---------------------------------LPVKWMAPESIFNCVYTFESDVW 254
Query: 697 SFGVILLELLTGKVIVVDELGQG--NGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFK 754
S+G+ L EL + LG G+ V+ K E A +
Sbjct: 255 SYGIFLWELFS--------LGSSPYPGMPVDSK----FYKMIKEGFRMLSPEHAPAEMYD 302
Query: 755 LGYSCASPLPQKRPSMKEALQALEK 779
+ +C P KRP+ K+ +Q +EK
Sbjct: 303 IMKTCWDADPLKRPTFKQIVQLIEK 327
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 64/120 (53%), Gaps = 14/120 (11%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARY--RKMGSSPCHLP 574
+ ET++ ++ KL HP +++I+ F+ ++ I+ + + G L + +++ + C L
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 119
Query: 575 WEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP---KIGDFGLERLVTGDTS 631
+ L + +LHE +H +LKP NVLL + E KI DFG +++ G+TS
Sbjct: 120 FYQML-------LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETS 171
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 113/296 (38%), Gaps = 58/296 (19%)
Query: 497 EDGT--ALAVRRIGENSV--DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEK------ 546
EDG+ +AV+ + + + +F + + + HP++ ++ G K
Sbjct: 47 EDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIP 106
Query: 547 LIIYDFVPNGSL-ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPR 605
++I F+ +G L A ++G +P +LP + ++ +A G+ +L + +H +L R
Sbjct: 107 MVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAAR 166
Query: 606 NVLLGNDMEPKIGDFGLER-LVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXX 664
N +L DM + DFGL R + +GD G A K
Sbjct: 167 NCMLAEDMTVCVADFGLSRKIYSGDYYRQ---GCASKLPVK------------------- 204
Query: 665 XXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQGNGLLV 724
+ A ESL DV++FGV + E++T GQ +
Sbjct: 205 -------------WLALESLADNLYTVHSDVWAFGVTMWEIMTR--------GQTPYAGI 243
Query: 725 EDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780
E+ + E + + L Y C S P++RPS LE I
Sbjct: 244 ENAE---IYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENI 296
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 64/120 (53%), Gaps = 14/120 (11%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARY--RKMGSSPCHLP 574
+ ET++ ++ KL HP +++I+ F+ ++ I+ + + G L + +++ + C L
Sbjct: 67 NVETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLY 125
Query: 575 WEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP---KIGDFGLERLVTGDTS 631
+ L + +LHE +H +LKP NVLL + E KI DFG +++ G+TS
Sbjct: 126 FYQML-------LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETS 177
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 51/224 (22%)
Query: 491 MYKAVLEDGTALAVRR-IGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLII 549
+YKA ++ + LA + I S + D+ ++ ++A HPN+V++ ++ + I+
Sbjct: 26 VYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWIL 85
Query: 550 YDFVPNGSLANARY---RKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRN 606
+F G++ R + S + + K L +LH+ K +H +LK N
Sbjct: 86 IEFCAGGAVDAVMLELERPLTESQIQV-------VCKQTLDALNYLHDNKIIHRDLKAGN 138
Query: 607 VLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXX 666
+L D + K+ DFG+ SA+N ++ RDSF
Sbjct: 139 ILFTLDGDIKLADFGV---------------SAKN--TRTXIQRRDSF------------ 169
Query: 667 XXXXXXXXXXXYHAPESL--RSIKPNP---KWDVYSFGVILLEL 705
+ APE + + K P K DV+S G+ L+E+
Sbjct: 170 ------IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 14/118 (11%)
Query: 519 ETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARY--RKMGSSPCHLPWE 576
ET++ ++ KL HP +++I+ F+ ++ I+ + + G L + +++ + C L +
Sbjct: 202 ETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 260
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP---KIGDFGLERLVTGDTS 631
L + +LHE +H +LKP NVLL + E KI DFG +++ G+TS
Sbjct: 261 QML-------LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETS 310
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 21/151 (13%)
Query: 483 LGASGSSIMYKAVLED-GTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGF 539
LG S++ + V + G A + I S F+ E + R+ KL HPN+VR+
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 540 YWGVDEKLIIYDFVPNGSL-----ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+++D V G L A Y + +S C + + +A+ H
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHC----------IQQILESIAYCHS 123
Query: 595 KKHVHGNLKPRNVLLGNDME---PKIGDFGL 622
VH NLKP N+LL + + K+ DFGL
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGL 154
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 21/151 (13%)
Query: 483 LGASGSSIMYKAVLED-GTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGF 539
LG S++ + V + G A + I S F+ E + R+ KL HPN+VR+
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 540 YWGVDEKLIIYDFVPNGSL-----ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+++D V G L A Y + +S C + + +A+ H
Sbjct: 74 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHC----------IQQILESIAYCHS 123
Query: 595 KKHVHGNLKPRNVLLGNDME---PKIGDFGL 622
VH NLKP N+LL + + K+ DFGL
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGL 154
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 14/118 (11%)
Query: 519 ETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARY--RKMGSSPCHLPWE 576
ET++ ++ KL HP +++I+ F+ ++ I+ + + G L + +++ + C L +
Sbjct: 188 ETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 246
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP---KIGDFGLERLVTGDTS 631
L + +LHE +H +LKP NVLL + E KI DFG +++ G+TS
Sbjct: 247 QML-------LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETS 296
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 21/151 (13%)
Query: 483 LGASGSSIMYKAVLED-GTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGF 539
LG S++ + V + G A + I S F+ E + R+ KL HPN+VR+
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 540 YWGVDEKLIIYDFVPNGSL-----ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+++D V G L A Y + +S C + + +A+ H
Sbjct: 73 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHC----------IQQILESIAYCHS 122
Query: 595 KKHVHGNLKPRNVLLGNDME---PKIGDFGL 622
VH NLKP N+LL + + K+ DFGL
Sbjct: 123 NGIVHRNLKPENLLLASKAKGAAVKLADFGL 153
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 76/191 (39%), Gaps = 46/191 (24%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+V ++ KL HPN++++ I+ + G L + ++ S +
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-----R 125
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGN---DMEPKIGDFGLERLVTGDTSSSKAGG 637
I K V G+ ++H+ VH +LKP N+LL + D + KI DFGL +T G
Sbjct: 126 IIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIG 185
Query: 638 SARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYS 697
+A Y APE LR + K DV+S
Sbjct: 186 TA-------------------------------------YYIAPEVLRGT-YDEKCDVWS 207
Query: 698 FGVILLELLTG 708
GVIL LL+G
Sbjct: 208 AGVILYILLSG 218
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 94/231 (40%), Gaps = 50/231 (21%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRD---FETQVRVIAKLVHPNLVRIRGFY 540
GA G ++ K L G A++ I ++SV + +V V+ +L HPN++++ F+
Sbjct: 15 GAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFF 73
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHG 600
++ + G L + + S I K V G +LH+ VH
Sbjct: 74 EDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAA-----VIMKQVLSGTTYLHKHNIVHR 128
Query: 601 NLKPRNVLL---GNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDL 657
+LKP N+LL D KI DFGL ++ + GG + + TA
Sbjct: 129 DLKPENLLLESKSRDALIKIVDFGL-------SAHFEVGGKMKE---RLGTA-------- 170
Query: 658 XXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTG 708
Y APE LR K + K DV+S GVIL LL G
Sbjct: 171 -------------------YYIAPEVLRK-KYDEKCDVWSCGVILYILLCG 201
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 95/240 (39%), Gaps = 44/240 (18%)
Query: 483 LGASGSSIMYKAVLE-DGTALAVRRIGENSVDRFRD-FETQVRVIAKLVHPNLVRIRGFY 540
LG G ++++A + D A++RI + + R+ +V+ +AKL HP +VR +
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 541 W--GVDEKL-----IIYDFVPNGSLANARYRKMGSSPCHLPWEAR---LKIAKGVARGLA 590
EKL +Y ++ + + C + R L I +A +
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVE 132
Query: 591 FLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGD----TSSSKAGGSARNFGSKR 646
FLH K +H +LKP N+ D K+GDFGL + D T + AR+ G
Sbjct: 133 FLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQ-- 190
Query: 647 STASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELL 706
Y +PE + + K D++S G+IL ELL
Sbjct: 191 --------------------------VGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN--ARYRKMGSSPCHLP 574
DF + +I+K H N+VR G + I+ + + G L + R S P L
Sbjct: 120 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 179
Query: 575 WEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLL---GNDMEPKIGDFGLER 624
L +A+ +A G +L E +H ++ RN LL G KIGDFG+ R
Sbjct: 180 MLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 232
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 92/235 (39%), Gaps = 48/235 (20%)
Query: 482 ILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRD------FETQVRVIAKLVHPNLVR 535
++G +Y L D + S++R D F T+ ++ HPN++
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 536 IRGFYWGVD-EKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKG--VARGLAFL 592
+ G + L++ ++ +G L R + H P L I G VA+G+ FL
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDL-----RNFIRNETHNPTVKDL-IGFGLQVAKGMKFL 208
Query: 593 HEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRD 652
KK VH +L RN +L K+ DFGL R D + G+K
Sbjct: 209 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEFDSVHNKTGAKLPVK--- 261
Query: 653 SFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ A ESL++ K K DV+SFGV+L EL+T
Sbjct: 262 -------------------------WMALESLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 486 SGSSIMYKAVLEDGTALAVRRI---GENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
S ++ + + + +A++++ G+ S ++++D +VR + KL HPN ++ RG Y
Sbjct: 66 SFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR 125
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
++ ++ + K + + G +GLA+LH +H ++
Sbjct: 126 EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-----AVTHGALQGLAYLHSHNMIHRDV 180
Query: 603 KPRNVLLGNDMEPKIGDFG 621
K N+LL K+GDFG
Sbjct: 181 KAGNILLSEPGLVKLGDFG 199
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 92/235 (39%), Gaps = 48/235 (20%)
Query: 482 ILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRD------FETQVRVIAKLVHPNLVR 535
++G +Y L D + S++R D F T+ ++ HPN++
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 536 IRGFYWGVD-EKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKG--VARGLAFL 592
+ G + L++ ++ +G L R + H P L I G VA+G+ FL
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDL-----RNFIRNETHNPTVKDL-IGFGLQVAKGMKFL 147
Query: 593 HEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRD 652
KK VH +L RN +L K+ DFGL R D + G+K
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEFDSVHNKTGAKLPVK--- 200
Query: 653 SFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ A ESL++ K K DV+SFGV+L EL+T
Sbjct: 201 -------------------------WMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 92/235 (39%), Gaps = 48/235 (20%)
Query: 482 ILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRD------FETQVRVIAKLVHPNLVR 535
++G +Y L D + S++R D F T+ ++ HPN++
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 536 IRGFYWGVD-EKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKG--VARGLAFL 592
+ G + L++ ++ +G L R + H P L I G VA+G+ FL
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDL-----RNFIRNETHNPTVKDL-IGFGLQVAKGMKFL 150
Query: 593 HEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRD 652
KK VH +L RN +L K+ DFGL R D + G+K
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEFDSVHNKTGAKLPVK--- 203
Query: 653 SFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ A ESL++ K K DV+SFGV+L EL+T
Sbjct: 204 -------------------------WMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWE 576
DF +V + L H NL+R+ G K++ + P GSL + + G H
Sbjct: 61 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQG----HFLLG 115
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
+ A VA G+ +L K+ +H +L RN+LL KIGDFGL R
Sbjct: 116 TLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMR 163
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN--ARYRKMGSSPCHLP 574
DF + +I+K H N+VR G + I+ + + G L + R S P L
Sbjct: 97 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 156
Query: 575 WEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLL---GNDMEPKIGDFGLER 624
L +A+ +A G +L E +H ++ RN LL G KIGDFG+ R
Sbjct: 157 MLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 209
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 79/196 (40%), Gaps = 50/196 (25%)
Query: 520 TQVRVIAKLVHPNLVRIRGFYWGVDEK-----LIIYDFVPNGSLANARYRKMGSSPCHLP 574
++V ++ +L HPN+VR +Y + ++ I+ ++ G LA+ K +L
Sbjct: 54 SEVNLLRELKHPNIVR---YYDRIIDRTNTTLYIVMEYCEGGDLASV-ITKGTKERQYLD 109
Query: 575 WEARLKIAKGVARGLAFLHEKKH-----VHGNLKPRNVLLGNDMEPKIGDFGLERLVTGD 629
E L++ + L H + +H +LKP NV L K+GDFGL R++ D
Sbjct: 110 EEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD 169
Query: 630 TSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKP 689
TS +KA Y +PE + +
Sbjct: 170 TSFAKA------------------------------------FVGTPYYMSPEQMNRMSY 193
Query: 690 NPKWDVYSFGVILLEL 705
N K D++S G +L EL
Sbjct: 194 NEKSDIWSLGCLLYEL 209
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 92/235 (39%), Gaps = 48/235 (20%)
Query: 482 ILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRD------FETQVRVIAKLVHPNLVR 535
++G +Y L D + S++R D F T+ ++ HPN++
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 100
Query: 536 IRGFYWGVD-EKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKG--VARGLAFL 592
+ G + L++ ++ +G L R + H P L I G VA+G+ FL
Sbjct: 101 LLGICLRSEGSPLVVLPYMKHGDL-----RNFIRNETHNPTVKDL-IGFGLQVAKGMKFL 154
Query: 593 HEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRD 652
KK VH +L RN +L K+ DFGL R D + G+K
Sbjct: 155 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEFDSVHNKTGAKLPVK--- 207
Query: 653 SFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ A ESL++ K K DV+SFGV+L EL+T
Sbjct: 208 -------------------------WMALESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 73/190 (38%), Gaps = 43/190 (22%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEARL 579
++ + L H ++V GF+ D ++ + SL + RK + P EAR
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP-----EARY 119
Query: 580 KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639
+ + + G +LH + +H +LK N+ L D+E KIGDFGL V D K
Sbjct: 120 YL-RQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGT 178
Query: 640 RNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFG 699
N Y APE L + + DV+S G
Sbjct: 179 PN------------------------------------YIAPEVLSKKGHSFEVDVWSIG 202
Query: 700 VILLELLTGK 709
I+ LL GK
Sbjct: 203 CIMYTLLVGK 212
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 65/139 (46%), Gaps = 8/139 (5%)
Query: 486 SGSSIMYKAVLEDGTALAVRRI---GENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
S ++ + + + +A++++ G+ S ++++D +VR + KL HPN ++ RG Y
Sbjct: 27 SFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR 86
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
++ ++ + K + + G +GLA+LH +H ++
Sbjct: 87 EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIA-----AVTHGALQGLAYLHSHNMIHRDV 141
Query: 603 KPRNVLLGNDMEPKIGDFG 621
K N+LL K+GDFG
Sbjct: 142 KAGNILLSEPGLVKLGDFG 160
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 92/235 (39%), Gaps = 48/235 (20%)
Query: 482 ILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRD------FETQVRVIAKLVHPNLVR 535
++G +Y L D + S++R D F T+ ++ HPN++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 536 IRGFYWGVD-EKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKG--VARGLAFL 592
+ G + L++ ++ +G L R + H P L I G VA+G+ FL
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDL-----RNFIRNETHNPTVKDL-IGFGLQVAKGMKFL 149
Query: 593 HEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRD 652
KK VH +L RN +L K+ DFGL R D + G+K
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEFDSVHNKTGAKLPVK--- 202
Query: 653 SFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ A ESL++ K K DV+SFGV+L EL+T
Sbjct: 203 -------------------------WMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 73/190 (38%), Gaps = 43/190 (22%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEARL 579
++ + L H ++V GF+ D ++ + SL + RK + P EAR
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP-----EARY 121
Query: 580 KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639
+ + + G +LH + +H +LK N+ L D+E KIGDFGL V D K
Sbjct: 122 YL-RQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGT 180
Query: 640 RNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFG 699
N Y APE L + + DV+S G
Sbjct: 181 PN------------------------------------YIAPEVLSKKGHSFEVDVWSIG 204
Query: 700 VILLELLTGK 709
I+ LL GK
Sbjct: 205 CIMYTLLVGK 214
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 73/190 (38%), Gaps = 43/190 (22%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEARL 579
++ + L H ++V GF+ D ++ + SL + RK + P EAR
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP-----EARY 121
Query: 580 KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639
+ + + G +LH + +H +LK N+ L D+E KIGDFGL V D K
Sbjct: 122 YL-RQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGT 180
Query: 640 RNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFG 699
N Y APE L + + DV+S G
Sbjct: 181 PN------------------------------------YIAPEVLSKKGHSFEVDVWSIG 204
Query: 700 VILLELLTGK 709
I+ LL GK
Sbjct: 205 CIMYTLLVGK 214
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 92/235 (39%), Gaps = 48/235 (20%)
Query: 482 ILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRD------FETQVRVIAKLVHPNLVR 535
++G +Y L D + S++R D F T+ ++ HPN++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 536 IRGFYWGVD-EKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKG--VARGLAFL 592
+ G + L++ ++ +G L R + H P L I G VA+G+ FL
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDL-----RNFIRNETHNPTVKDL-IGFGLQVAKGMKFL 149
Query: 593 HEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRD 652
KK VH +L RN +L K+ DFGL R D + G+K
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEFDSVHNKTGAKLPVK--- 202
Query: 653 SFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ A ESL++ K K DV+SFGV+L EL+T
Sbjct: 203 -------------------------WMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWE 576
DF +V + L H NL+R+ G K++ + P GSL + + G H
Sbjct: 67 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQG----HFLLG 121
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
+ A VA G+ +L K+ +H +L RN+LL KIGDFGL R
Sbjct: 122 TLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMR 169
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWE 576
DF +V + L H NL+R+ G K++ + P GSL + + G H
Sbjct: 67 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQG----HFLLG 121
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
+ A VA G+ +L K+ +H +L RN+LL KIGDFGL R
Sbjct: 122 TLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMR 169
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 514 RFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANAR---YRKMGSSP 570
++ DF+ ++++I + + + G DE IIY+++ N S+ + +
Sbjct: 86 KYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYT 145
Query: 571 CHLPWEARLKIAKGVARGLAFLHEKKHV-HGNLKPRNVLLGNDMEPKIGDFG 621
C +P + I K V +++H +K++ H ++KP N+L+ + K+ DFG
Sbjct: 146 CFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFG 197
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWE 576
DF +V + L H NL+R+ G K++ + P GSL + + G H
Sbjct: 61 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQG----HFLLG 115
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
+ A VA G+ +L K+ +H +L RN+LL KIGDFGL R
Sbjct: 116 TLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMR 163
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 96/231 (41%), Gaps = 50/231 (21%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFET---QVRVIAKLVHPNLVRIRGFY 540
G+ G I+ K + G AV+ I + V + D E+ +V+++ +L HPN++++ F+
Sbjct: 37 GSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFF 95
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHG 600
++ + G L + + S +I + V G+ ++H+ K VH
Sbjct: 96 EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-----RIIRQVLSGITYMHKNKIVHR 150
Query: 601 NLKPRNVLL---GNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDL 657
+LKP N+LL D +I DFGL S +++ K TA
Sbjct: 151 DLKPENLLLESKSKDANIRIIDFGL----------STHFEASKKMKDKIGTA-------- 192
Query: 658 XXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTG 708
Y APE L + K DV+S GVIL LL+G
Sbjct: 193 -------------------YYIAPEVLHGT-YDEKCDVWSTGVILYILLSG 223
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 73/190 (38%), Gaps = 43/190 (22%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEARL 579
++ + L H ++V GF+ D ++ + SL + RK + P EAR
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP-----EARY 143
Query: 580 KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639
+ + + G +LH + +H +LK N+ L D+E KIGDFGL V D K
Sbjct: 144 YL-RQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGT 202
Query: 640 RNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFG 699
N Y APE L + + DV+S G
Sbjct: 203 PN------------------------------------YIAPEVLSKKGHSFEVDVWSIG 226
Query: 700 VILLELLTGK 709
I+ LL GK
Sbjct: 227 CIMYTLLVGK 236
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 73/190 (38%), Gaps = 43/190 (22%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEARL 579
++ + L H ++V GF+ D ++ + SL + RK + P EAR
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP-----EARY 125
Query: 580 KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639
+ + + G +LH + +H +LK N+ L D+E KIGDFGL V D K
Sbjct: 126 YL-RQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGT 184
Query: 640 RNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFG 699
N Y APE L + + DV+S G
Sbjct: 185 PN------------------------------------YIAPEVLSKKGHSFEVDVWSIG 208
Query: 700 VILLELLTGK 709
I+ LL GK
Sbjct: 209 CIMYTLLVGK 218
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 92/235 (39%), Gaps = 48/235 (20%)
Query: 482 ILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRD------FETQVRVIAKLVHPNLVR 535
++G +Y L D + S++R D F T+ ++ HPN++
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 536 IRGFYWGVD-EKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKG--VARGLAFL 592
+ G + L++ ++ +G L R + H P L I G VA+G+ FL
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDL-----RNFIRNETHNPTVKDL-IGFGLQVAKGMKFL 150
Query: 593 HEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRD 652
KK VH +L RN +L K+ DFGL R D + G+K
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMLDKEFDSVHNKTGAKLPVK--- 203
Query: 653 SFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ A ESL++ K K DV+SFGV+L EL+T
Sbjct: 204 -------------------------WMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWE 576
DF +V + L H NL+R+ G K++ + P GSL + + G H
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQG----HFLLG 111
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
+ A VA G+ +L K+ +H +L RN+LL KIGDFGL R
Sbjct: 112 TLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMR 159
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 30/139 (21%)
Query: 489 SIMYKAVLE-DGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKL 547
+++K+ LE +G +RR ++ + + L HPN++R+ ++
Sbjct: 45 KVLFKSQLEKEGVEHQLRR--------------EIEIQSHLRHPNILRMYNYFHDRKRIY 90
Query: 548 IIYDFVPNGSL-----ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
++ +F P G L + R+ + S+ + +A L + HE+K +H ++
Sbjct: 91 LMLEFAPRGELYKELQKHGRFDEQRSA----------TFMEELADALHYCHERKVIHRDI 140
Query: 603 KPRNVLLGNDMEPKIGDFG 621
KP N+L+G E KI DFG
Sbjct: 141 KPENLLMGYKGELKIADFG 159
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWE 576
DF +V + L H NL+R+ G K++ + P GSL + + G H
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQG----HFLLG 111
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
+ A VA G+ +L K+ +H +L RN+LL KIGDFGL R
Sbjct: 112 TLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMR 159
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 33/151 (21%)
Query: 477 KASAYILGASGSSIMYKAVLE-DGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVR 535
K + +I+ +++K+ LE +G +RR ++ + + L HPN++R
Sbjct: 37 KQNKFIMALK---VLFKSQLEKEGVEHQLRR--------------EIEIQSHLRHPNILR 79
Query: 536 IRGFYWGVDEKLIIYDFVPNGSL-----ANARYRKMGSSPCHLPWEARLKIAKGVARGLA 590
+ ++ ++ +F P G L + R+ + S+ + +A L
Sbjct: 80 MYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA----------TFMEELADALH 129
Query: 591 FLHEKKHVHGNLKPRNVLLGNDMEPKIGDFG 621
+ HE+K +H ++KP N+L+G E KI DFG
Sbjct: 130 YCHERKVIHRDIKPENLLMGYKGELKIADFG 160
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 73/190 (38%), Gaps = 43/190 (22%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEARL 579
++ + L H ++V GF+ D ++ + SL + RK + P EAR
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEP-----EARY 145
Query: 580 KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639
+ + + G +LH + +H +LK N+ L D+E KIGDFGL V D K
Sbjct: 146 YL-RQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGT 204
Query: 640 RNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFG 699
N Y APE L + + DV+S G
Sbjct: 205 PN------------------------------------YIAPEVLSKKGHSFEVDVWSIG 228
Query: 700 VILLELLTGK 709
I+ LL GK
Sbjct: 229 CIMYTLLVGK 238
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWE 576
DF +V + L H NL+R+ G K++ + P GSL + + G H
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQG----HFLLG 111
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
+ A VA G+ +L K+ +H +L RN+LL KIGDFGL R
Sbjct: 112 TLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMR 159
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 33/151 (21%)
Query: 477 KASAYILGASGSSIMYKAVLE-DGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVR 535
K + +I+ +++K+ LE +G +RR ++ + + L HPN++R
Sbjct: 36 KQNKFIMALK---VLFKSQLEKEGVEHQLRR--------------EIEIQSHLRHPNILR 78
Query: 536 IRGFYWGVDEKLIIYDFVPNGSL-----ANARYRKMGSSPCHLPWEARLKIAKGVARGLA 590
+ ++ ++ +F P G L + R+ + S+ + +A L
Sbjct: 79 MYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSA----------TFMEELADALH 128
Query: 591 FLHEKKHVHGNLKPRNVLLGNDMEPKIGDFG 621
+ HE+K +H ++KP N+L+G E KI DFG
Sbjct: 129 YCHERKVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 43/191 (22%)
Query: 520 TQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEAR 578
T++ + L +P++V GF+ D ++ + SL + RK + P EAR
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEP-----EAR 145
Query: 579 LKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638
+ + + +G+ +LH + +H +LK N+ L +DM+ KIGDFGL + D K
Sbjct: 146 YFMRQTI-QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCG 204
Query: 639 ARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSF 698
N Y APE L + + D++S
Sbjct: 205 TPN------------------------------------YIAPEVLCKKGHSFEVDIWSL 228
Query: 699 GVILLELLTGK 709
G IL LL GK
Sbjct: 229 GCILYTLLVGK 239
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN--ARYRKMGSSPCHLP 574
DF + +I+K H N+VR G + I+ + + G L + R S P L
Sbjct: 80 DFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLA 139
Query: 575 WEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLL---GNDMEPKIGDFGLERLVTGDTS 631
L +A+ +A G +L E +H ++ RN LL G KIGDFG+ + + S
Sbjct: 140 MLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIY-RAS 198
Query: 632 SSKAGGSA 639
+ GG A
Sbjct: 199 YYRKGGCA 206
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 92/235 (39%), Gaps = 48/235 (20%)
Query: 482 ILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRD------FETQVRVIAKLVHPNLVR 535
++G +Y L D + S++R D F T+ ++ HPN++
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 536 IRGFYWGVD-EKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKG--VARGLAFL 592
+ G + L++ ++ +G L R + H P L I G VA+G+ +L
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDL-----RNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 148
Query: 593 HEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRD 652
KK VH +L RN +L K+ DFGL R D + G+K
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEXXSVHNKTGAKLPVK--- 201
Query: 653 SFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ A ESL++ K K DV+SFGV+L EL+T
Sbjct: 202 -------------------------WMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 99/235 (42%), Gaps = 41/235 (17%)
Query: 482 ILGASGSSIMYKAVLE-DGTALAVRRIG-ENSVDRFRDFETQVRVIAKLVHPNLVRIRGF 539
++G+ ++++ A +A++RI E + +++ +++ HPN+V
Sbjct: 22 VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTS 81
Query: 540 YWGVDEKLIIYDFVPNGSLAN--ARYRKMGSSPCHLPWEARLK-IAKGVARGLAFLHEKK 596
+ DE ++ + GS+ + G + E+ + I + V GL +LH+
Sbjct: 82 FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG 141
Query: 597 HVHGNLKPRNVLLGNDMEPKIGDFGLERLVT--GDTSSSKAGGSARNFGSKRSTASRDSF 654
+H ++K N+LLG D +I DFG+ + GD + +K R +F
Sbjct: 142 QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKV---------------RKTF 186
Query: 655 QDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKP-NPKWDVYSFGVILLELLTG 708
+ APE + ++ + K D++SFG+ +EL TG
Sbjct: 187 ------------------VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 223
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 15/97 (15%)
Query: 542 GVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK----KH 597
G E L++ ++ PNGSL +Y + +S W + ++A V RGLA+LH + H
Sbjct: 83 GRMEYLLVMEYYPNGSLX--KYLSLHTSD----WVSSCRLAHSVTRGLAYLHTELPRGDH 136
Query: 598 V-----HGNLKPRNVLLGNDMEPKIGDFGLERLVTGD 629
H +L RNVL+ ND I DFGL +TG+
Sbjct: 137 YKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGN 173
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 43/191 (22%)
Query: 520 TQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEAR 578
T++ + L +P++V GF+ D ++ + SL + RK + P EAR
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEP-----EAR 145
Query: 579 LKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638
+ + + +G+ +LH + +H +LK N+ L +DM+ KIGDFGL + D K
Sbjct: 146 YFMRQTI-QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCG 204
Query: 639 ARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSF 698
N Y APE L + + D++S
Sbjct: 205 TPN------------------------------------YIAPEVLCKKGHSFEVDIWSL 228
Query: 699 GVILLELLTGK 709
G IL LL GK
Sbjct: 229 GCILYTLLVGK 239
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 106/268 (39%), Gaps = 51/268 (19%)
Query: 445 QRQQDHVHERQNKKGTLVIVD-GDKELELETLLKASAYILGASGSSIMYKA-VLEDGTAL 502
QR+ V Q + ++VD GD L+ +K +G + I+ A V G +
Sbjct: 5 QREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIK-----IGEGSTGIVCIATVRSSGKLV 59
Query: 503 AVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN-A 561
AV+++ R +V ++ H N+V + Y DE ++ +F+ G+L +
Sbjct: 60 AVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV 119
Query: 562 RYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFG 621
+ +M E + V + L+ LH + +H ++K ++LL +D K+ DFG
Sbjct: 120 THTRMNE-------EQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFG 172
Query: 622 LERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAP 681
V+ + K + AP
Sbjct: 173 FCAQVSKEVPRRKX------------------------------------LVGTPYWMAP 196
Query: 682 ESLRSIKPNPKWDVYSFGVILLELLTGK 709
E + + P+ D++S G++++E++ G+
Sbjct: 197 ELISRLPYGPEVDIWSLGIMVIEMVDGE 224
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 43/191 (22%)
Query: 520 TQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEAR 578
T++ + L +P++V GF+ D ++ + SL + RK + P EAR
Sbjct: 75 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEP-----EAR 129
Query: 579 LKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638
+ + + +G+ +LH + +H +LK N+ L +DM+ KIGDFGL + D K
Sbjct: 130 YFMRQTI-QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCG 188
Query: 639 ARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSF 698
N Y APE L + + D++S
Sbjct: 189 TPN------------------------------------YIAPEVLCKKGHSFEVDIWSL 212
Query: 699 GVILLELLTGK 709
G IL LL GK
Sbjct: 213 GCILYTLLVGK 223
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 106/268 (39%), Gaps = 51/268 (19%)
Query: 445 QRQQDHVHERQNKKGTLVIVD-GDKELELETLLKASAYILGASGSSIMYKA-VLEDGTAL 502
QR+ V Q + ++VD GD L+ +K +G + I+ A V G +
Sbjct: 3 QREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIK-----IGEGSTGIVCIATVRSSGKLV 57
Query: 503 AVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN-A 561
AV+++ R +V ++ H N+V + Y DE ++ +F+ G+L +
Sbjct: 58 AVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV 117
Query: 562 RYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFG 621
+ +M E + V + L+ LH + +H ++K ++LL +D K+ DFG
Sbjct: 118 THTRMNE-------EQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFG 170
Query: 622 LERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAP 681
V+ + K + AP
Sbjct: 171 FCAQVSKEVPRRKX------------------------------------LVGTPYWMAP 194
Query: 682 ESLRSIKPNPKWDVYSFGVILLELLTGK 709
E + + P+ D++S G++++E++ G+
Sbjct: 195 ELISRLPYGPEVDIWSLGIMVIEMVDGE 222
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 94/231 (40%), Gaps = 50/231 (21%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRD---FETQVRVIAKLVHPNLVRIRGFY 540
GA G ++ K L G A++ I ++SV + +V V+ +L HPN++++ F+
Sbjct: 32 GAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFF 90
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHG 600
++ + G L + + S I K V G +LH+ VH
Sbjct: 91 EDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAA-----VIMKQVLSGTTYLHKHNIVHR 145
Query: 601 NLKPRNVLL---GNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDL 657
+LKP N+LL D KI DFGL ++ + GG + + TA
Sbjct: 146 DLKPENLLLESKSRDALIKIVDFGL-------SAHFEVGGKMKE---RLGTA-------- 187
Query: 658 XXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTG 708
Y APE LR K + K DV+S GVIL LL G
Sbjct: 188 -------------------YYIAPEVLRK-KYDEKCDVWSCGVILYILLCG 218
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 4/102 (3%)
Query: 518 FETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEA 577
F +++KL H +LV G + DE +++ +FV GSL Y K + ++ W
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDT--YLKKNKNCINILW-- 114
Query: 578 RLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGD 619
+L++AK +A + FL E +HGN+ +N+LL + + K G+
Sbjct: 115 KLEVAKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGN 156
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 96/229 (41%), Gaps = 45/229 (19%)
Query: 483 LGASGSSIMYKAV-LEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
LG +YKA+ E G +A++++ S ++ ++ ++ + P++V+ G Y+
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 542 GVDEKLIIYDFVPNGSLANA-RYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHG 600
+ I+ ++ GS+++ R R + + I + +GL +LH + +H
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIA-----TILQSTLKGLEYLHFMRKIHR 149
Query: 601 NLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXX 660
++K N+LL + K+ DFG+ G + +KR+ F
Sbjct: 150 DIKAGNILLNTEGHAKLADFGV-------------AGQLTDXMAKRNXVIGTPF------ 190
Query: 661 XXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709
+ APE ++ I N D++S G+ +E+ GK
Sbjct: 191 -----------------WMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 96/231 (41%), Gaps = 50/231 (21%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFET---QVRVIAKLVHPNLVRIRGFY 540
G+ G I+ K + G AV+ I + V + D E+ +V+++ +L HPN++++ F+
Sbjct: 60 GSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFF 118
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHG 600
++ + G L + + S +I + V G+ ++H+ K VH
Sbjct: 119 EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-----RIIRQVLSGITYMHKNKIVHR 173
Query: 601 NLKPRNVLL---GNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDL 657
+LKP N+LL D +I DFGL S +++ K TA
Sbjct: 174 DLKPENLLLESKSKDANIRIIDFGL----------STHFEASKKMKDKIGTA-------- 215
Query: 658 XXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTG 708
Y APE L + K DV+S GVIL LL+G
Sbjct: 216 -------------------YYIAPEVLHGT-YDEKCDVWSTGVILYILLSG 246
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 96/231 (41%), Gaps = 50/231 (21%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFET---QVRVIAKLVHPNLVRIRGFY 540
G+ G I+ K + G AV+ I + V + D E+ +V+++ +L HPN++++ F+
Sbjct: 61 GSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFF 119
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHG 600
++ + G L + + S +I + V G+ ++H+ K VH
Sbjct: 120 EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-----RIIRQVLSGITYMHKNKIVHR 174
Query: 601 NLKPRNVLL---GNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDL 657
+LKP N+LL D +I DFGL S +++ K TA
Sbjct: 175 DLKPENLLLESKSKDANIRIIDFGL----------STHFEASKKMKDKIGTA-------- 216
Query: 658 XXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTG 708
Y APE L + K DV+S GVIL LL+G
Sbjct: 217 -------------------YYIAPEVLHGT-YDEKCDVWSTGVILYILLSG 247
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 106/268 (39%), Gaps = 51/268 (19%)
Query: 445 QRQQDHVHERQNKKGTLVIVD-GDKELELETLLKASAYILGASGSSIMYKA-VLEDGTAL 502
QR+ V Q + ++VD GD L+ +K +G + I+ A V G +
Sbjct: 48 QREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIK-----IGEGSTGIVCIATVRSSGKLV 102
Query: 503 AVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN-A 561
AV+++ R +V ++ H N+V + Y DE ++ +F+ G+L +
Sbjct: 103 AVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV 162
Query: 562 RYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFG 621
+ +M E + V + L+ LH + +H ++K ++LL +D K+ DFG
Sbjct: 163 THTRMNE-------EQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFG 215
Query: 622 LERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAP 681
V+ + K + AP
Sbjct: 216 FCAQVSKEVPRRKX------------------------------------LVGTPYWMAP 239
Query: 682 ESLRSIKPNPKWDVYSFGVILLELLTGK 709
E + + P+ D++S G++++E++ G+
Sbjct: 240 ELISRLPYGPEVDIWSLGIMVIEMVDGE 267
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 99/235 (42%), Gaps = 41/235 (17%)
Query: 482 ILGASGSSIMYKAVLE-DGTALAVRRIG-ENSVDRFRDFETQVRVIAKLVHPNLVRIRGF 539
++G+ ++++ A +A++RI E + +++ +++ HPN+V
Sbjct: 17 VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTS 76
Query: 540 YWGVDEKLIIYDFVPNGSLAN--ARYRKMGSSPCHLPWEARLK-IAKGVARGLAFLHEKK 596
+ DE ++ + GS+ + G + E+ + I + V GL +LH+
Sbjct: 77 FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG 136
Query: 597 HVHGNLKPRNVLLGNDMEPKIGDFGLERLVT--GDTSSSKAGGSARNFGSKRSTASRDSF 654
+H ++K N+LLG D +I DFG+ + GD + +K R +F
Sbjct: 137 QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKV---------------RKTF 181
Query: 655 QDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKP-NPKWDVYSFGVILLELLTG 708
+ APE + ++ + K D++SFG+ +EL TG
Sbjct: 182 ------------------VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 218
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 105/260 (40%), Gaps = 66/260 (25%)
Query: 469 ELELETLLKASAYIL-GASGSSIMYKAVLEDGTALAVRRIGEN-SVDRFRDFETQVRVIA 526
E E ++KA+A+ L G +G T +AV+ + EN S RD ++ V+
Sbjct: 33 EGEFGKVVKATAFHLKGRAGY-----------TTVAVKMLKENASPSELRDLLSEFNVLK 81
Query: 527 KLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHL------------- 573
++ HP+++++ G L+I ++ GSL P +L
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 574 PWEARLKI------AKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVT 627
P E L + A +++G+ +L E K VH +L RN+L+ + KI DFGL R V
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 628 GDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSI 687
+ S KRS + A ESL
Sbjct: 202 EEDSX-----------VKRSQGR-----------------------IPVKWMAIESLFDH 227
Query: 688 KPNPKWDVYSFGVILLELLT 707
+ DV+SFGV+L E++T
Sbjct: 228 IYTTQSDVWSFGVLLWEIVT 247
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/268 (20%), Positives = 106/268 (39%), Gaps = 51/268 (19%)
Query: 445 QRQQDHVHERQNKKGTLVIVD-GDKELELETLLKASAYILGASGSSIMYKA-VLEDGTAL 502
QR+ V Q + ++VD GD L+ +K +G + I+ A V G +
Sbjct: 125 QREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIK-----IGEGSTGIVCIATVRSSGKLV 179
Query: 503 AVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN-A 561
AV+++ R +V ++ H N+V + Y DE ++ +F+ G+L +
Sbjct: 180 AVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV 239
Query: 562 RYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFG 621
+ +M E + V + L+ LH + +H ++K ++LL +D K+ DFG
Sbjct: 240 THTRMNE-------EQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFG 292
Query: 622 LERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAP 681
V+ + K + AP
Sbjct: 293 FCAQVSKEVPRRKX------------------------------------LVGTPYWMAP 316
Query: 682 ESLRSIKPNPKWDVYSFGVILLELLTGK 709
E + + P+ D++S G++++E++ G+
Sbjct: 317 ELISRLPYGPEVDIWSLGIMVIEMVDGE 344
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 88/218 (40%), Gaps = 55/218 (25%)
Query: 499 GTALAVRRIGENSVDR--FRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556
G +AVR I + ++ + +VR++ L HPN+V++ ++ ++ G
Sbjct: 39 GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 557 SL-----ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN 611
+ A+ R ++ EAR K + + + + H+K VH +LK N+LL
Sbjct: 99 EVFDYLVAHGRMKEK---------EARAKF-RQIVSAVQYCHQKFIVHRDLKAENLLLDA 148
Query: 612 DMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXX 671
DM KI DFG T FG+K T
Sbjct: 149 DMNIKIADFGFSNEFT--------------FGNKLDTFC--------------------- 173
Query: 672 XXXXXXYHAPESLRSIKPN-PKWDVYSFGVILLELLTG 708
Y APE + K + P+ DV+S GVIL L++G
Sbjct: 174 --GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 76/191 (39%), Gaps = 46/191 (24%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+V ++ KL HPN++++ I+ + G L + ++ S +
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE-----HDAAR 125
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGN---DMEPKIGDFGLERLVTGDTSSSKAGG 637
I K V G+ ++H+ VH +LKP N+LL + D + KI DFGL +T G
Sbjct: 126 IIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIG 185
Query: 638 SARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYS 697
+A Y APE LR + K DV+S
Sbjct: 186 TA-------------------------------------YYIAPEVLRGT-YDEKCDVWS 207
Query: 698 FGVILLELLTG 708
GVIL LL+G
Sbjct: 208 AGVILYILLSG 218
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 92/235 (39%), Gaps = 48/235 (20%)
Query: 482 ILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRD------FETQVRVIAKLVHPNLVR 535
++G +Y L D + S++R D F T+ ++ HPN++
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 113
Query: 536 IRGFYWGVD-EKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKG--VARGLAFL 592
+ G + L++ ++ +G L R + H P L I G VA+G+ +L
Sbjct: 114 LLGICLRSEGSPLVVLPYMKHGDL-----RNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 167
Query: 593 HEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRD 652
KK VH +L RN +L K+ DFGL R D + G+K
Sbjct: 168 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHNKTGAKLPVK--- 220
Query: 653 SFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ A ESL++ K K DV+SFGV+L EL+T
Sbjct: 221 -------------------------WMALESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 43/191 (22%)
Query: 520 TQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEAR 578
T++ + L +P++V GF+ D ++ + SL + RK + P EAR
Sbjct: 91 TEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEP-----EAR 145
Query: 579 LKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638
+ + + +G+ +LH + +H +LK N+ L +DM+ KIGDFGL + D K
Sbjct: 146 YFMRQTI-QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCG 204
Query: 639 ARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSF 698
N Y APE L + + D++S
Sbjct: 205 TPN------------------------------------YIAPEVLCKKGHSFEVDIWSL 228
Query: 699 GVILLELLTGK 709
G IL LL GK
Sbjct: 229 GCILYTLLVGK 239
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 76/191 (39%), Gaps = 46/191 (24%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+V ++ KL HPN++++ I+ + G L + ++ S +
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE-----HDAAR 125
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGN---DMEPKIGDFGLERLVTGDTSSSKAGG 637
I K V G+ ++H+ VH +LKP N+LL + D + KI DFGL +T G
Sbjct: 126 IIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIG 185
Query: 638 SARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYS 697
+A Y APE LR + K DV+S
Sbjct: 186 TA-------------------------------------YYIAPEVLRGT-YDEKCDVWS 207
Query: 698 FGVILLELLTG 708
GVIL LL+G
Sbjct: 208 AGVILYILLSG 218
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 105/260 (40%), Gaps = 66/260 (25%)
Query: 469 ELELETLLKASAYIL-GASGSSIMYKAVLEDGTALAVRRIGEN-SVDRFRDFETQVRVIA 526
E E ++KA+A+ L G +G T +AV+ + EN S RD ++ V+
Sbjct: 33 EGEFGKVVKATAFHLKGRAGY-----------TTVAVKMLKENASPSELRDLLSEFNVLK 81
Query: 527 KLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHL------------- 573
++ HP+++++ G L+I ++ GSL P +L
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 574 PWEARLKI------AKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVT 627
P E L + A +++G+ +L E K VH +L RN+L+ + KI DFGL R V
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 628 GDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSI 687
+ S KRS + A ESL
Sbjct: 202 EEDSY-----------VKRSQGR-----------------------IPVKWMAIESLFDH 227
Query: 688 KPNPKWDVYSFGVILLELLT 707
+ DV+SFGV+L E++T
Sbjct: 228 IYTTQSDVWSFGVLLWEIVT 247
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 78/196 (39%), Gaps = 50/196 (25%)
Query: 520 TQVRVIAKLVHPNLVRIRGFYWGVDEK-----LIIYDFVPNGSLANARYRKMGSSPCHLP 574
++V ++ +L HPN+VR +Y + ++ I+ ++ G LA+ K +L
Sbjct: 54 SEVNLLRELKHPNIVR---YYDRIIDRTNTTLYIVMEYCEGGDLASV-ITKGTKERQYLD 109
Query: 575 WEARLKIAKGVARGLAFLHEKKH-----VHGNLKPRNVLLGNDMEPKIGDFGLERLVTGD 629
E L++ + L H + +H +LKP NV L K+GDFGL R++ D
Sbjct: 110 EEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD 169
Query: 630 TSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKP 689
TS +K Y +PE + +
Sbjct: 170 TSFAKT------------------------------------FVGTPYYMSPEQMNRMSY 193
Query: 690 NPKWDVYSFGVILLEL 705
N K D++S G +L EL
Sbjct: 194 NEKSDIWSLGCLLYEL 209
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 92/235 (39%), Gaps = 48/235 (20%)
Query: 482 ILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRD------FETQVRVIAKLVHPNLVR 535
++G +Y L D + S++R D F T+ ++ HPN++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 536 IRGFYWGVD-EKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKG--VARGLAFL 592
+ G + L++ ++ +G L R + H P L I G VA+G+ +L
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDL-----RNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 149
Query: 593 HEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRD 652
KK VH +L RN +L K+ DFGL R D + G+K
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHNKTGAKLPVK--- 202
Query: 653 SFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ A ESL++ K K DV+SFGV+L EL+T
Sbjct: 203 -------------------------WMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 88/221 (39%), Gaps = 47/221 (21%)
Query: 497 EDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553
+G A++ + + V R + E + +++ + HP ++R+ G + + +I D++
Sbjct: 29 HNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYI 88
Query: 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDM 613
G L + RK P + A+ A+ V L +LH K ++ +LKP N+LL +
Sbjct: 89 EGGELFSL-LRKSQRFPNPV---AKFYAAE-VCLALEYLHSKDIIYRDLKPENILLDKNG 143
Query: 614 EPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXX 673
KI DFG + V D + G
Sbjct: 144 HIKITDFGFAKYVP-DVTYXLCGTP----------------------------------- 167
Query: 674 XXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD 714
Y APE + + N D +SFG+++ E+L G D
Sbjct: 168 ---DYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD 205
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 92/235 (39%), Gaps = 48/235 (20%)
Query: 482 ILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRD------FETQVRVIAKLVHPNLVR 535
++G +Y L D + S++R D F T+ ++ HPN++
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 536 IRGFYWGVD-EKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKG--VARGLAFL 592
+ G + L++ ++ +G L R + H P L I G VA+G+ +L
Sbjct: 115 LLGICLRSEGSPLVVLPYMKHGDL-----RNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 168
Query: 593 HEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRD 652
KK VH +L RN +L K+ DFGL R D + G+K
Sbjct: 169 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHNKTGAKLPVK--- 221
Query: 653 SFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ A ESL++ K K DV+SFGV+L EL+T
Sbjct: 222 -------------------------WMALESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 92/235 (39%), Gaps = 48/235 (20%)
Query: 482 ILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRD------FETQVRVIAKLVHPNLVR 535
++G +Y L D + S++R D F T+ ++ HPN++
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 536 IRGFYWGVD-EKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKG--VARGLAFL 592
+ G + L++ ++ +G L R + H P L I G VA+G+ +L
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDL-----RNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 146
Query: 593 HEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRD 652
KK VH +L RN +L K+ DFGL R D + G+K
Sbjct: 147 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHNKTGAKLPVK--- 199
Query: 653 SFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ A ESL++ K K DV+SFGV+L EL+T
Sbjct: 200 -------------------------WMALESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 92/235 (39%), Gaps = 48/235 (20%)
Query: 482 ILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRD------FETQVRVIAKLVHPNLVR 535
++G +Y L D + S++R D F T+ ++ HPN++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 536 IRGFYWGVD-EKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKG--VARGLAFL 592
+ G + L++ ++ +G L R + H P L I G VA+G+ +L
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDL-----RNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 149
Query: 593 HEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRD 652
KK VH +L RN +L K+ DFGL R D + G+K
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHNKTGAKLPVK--- 202
Query: 653 SFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ A ESL++ K K DV+SFGV+L EL+T
Sbjct: 203 -------------------------WMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 92/235 (39%), Gaps = 48/235 (20%)
Query: 482 ILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRD------FETQVRVIAKLVHPNLVR 535
++G +Y L D + S++R D F T+ ++ HPN++
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 536 IRGFYWGVD-EKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKG--VARGLAFL 592
+ G + L++ ++ +G L R + H P L I G VA+G+ +L
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDL-----RNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 144
Query: 593 HEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRD 652
KK VH +L RN +L K+ DFGL R D + G+K
Sbjct: 145 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHNKTGAKLPVK--- 197
Query: 653 SFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ A ESL++ K K DV+SFGV+L EL+T
Sbjct: 198 -------------------------WMALESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 54/124 (43%), Gaps = 34/124 (27%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER-LVTGDTSSSKAGGSARNFG 643
VARG+ +L E+K VH +L RN +L K+ DFGL R ++ + S + AR
Sbjct: 133 VARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHAR--- 189
Query: 644 SKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILL 703
+ A ESL++ + K DV+SFGV+L
Sbjct: 190 ------------------------------LPVKWTALESLQTYRFTTKSDVWSFGVLLW 219
Query: 704 ELLT 707
ELLT
Sbjct: 220 ELLT 223
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 96/231 (41%), Gaps = 50/231 (21%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFET---QVRVIAKLVHPNLVRIRGFY 540
G+ G I+ K + G AV+ I + V + D E+ +V+++ +L HPN++++ F+
Sbjct: 43 GSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFF 101
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHG 600
++ + G L + + S +I + V G+ ++H+ K VH
Sbjct: 102 EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-----RIIRQVLSGITYMHKNKIVHR 156
Query: 601 NLKPRNVLL---GNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDL 657
+LKP N+LL D +I DFGL S +++ K TA
Sbjct: 157 DLKPENLLLESKSKDANIRIIDFGL----------STHFEASKKMKDKIGTA-------- 198
Query: 658 XXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTG 708
Y APE L + K DV+S GVIL LL+G
Sbjct: 199 -------------------YYIAPEVLHGT-YDEKCDVWSTGVILYILLSG 229
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 92/235 (39%), Gaps = 48/235 (20%)
Query: 482 ILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRD------FETQVRVIAKLVHPNLVR 535
++G +Y L D + S++R D F T+ ++ HPN++
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 536 IRGFYWGVD-EKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKG--VARGLAFL 592
+ G + L++ ++ +G L R + H P L I G VA+G+ +L
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDL-----RNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 148
Query: 593 HEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRD 652
KK VH +L RN +L K+ DFGL R D + G+K
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHNKTGAKLPVK--- 201
Query: 653 SFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ A ESL++ K K DV+SFGV+L EL+T
Sbjct: 202 -------------------------WMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 92/235 (39%), Gaps = 48/235 (20%)
Query: 482 ILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRD------FETQVRVIAKLVHPNLVR 535
++G +Y L D + S++R D F T+ ++ HPN++
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 536 IRGFYWGVD-EKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKG--VARGLAFL 592
+ G + L++ ++ +G L R + H P L I G VA+G+ +L
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDL-----RNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 141
Query: 593 HEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRD 652
KK VH +L RN +L K+ DFGL R D + G+K
Sbjct: 142 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHNKTGAKLPVK--- 194
Query: 653 SFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ A ESL++ K K DV+SFGV+L EL+T
Sbjct: 195 -------------------------WMALESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 92/235 (39%), Gaps = 48/235 (20%)
Query: 482 ILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRD------FETQVRVIAKLVHPNLVR 535
++G +Y L D + S++R D F T+ ++ HPN++
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIH-CAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 536 IRGFYWGVD-EKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKG--VARGLAFL 592
+ G + L++ ++ +G L R + H P L I G VA+G+ +L
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDL-----RNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 147
Query: 593 HEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRD 652
KK VH +L RN +L K+ DFGL R D + G+K
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHNKTGAKLPVK--- 200
Query: 653 SFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ A ESL++ K K DV+SFGV+L EL+T
Sbjct: 201 -------------------------WMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Query: 504 VRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYD-FVPNGSLANAR 562
V R+ E+ +D R ++ ++ +L ++R+ + E L+ +D +A++
Sbjct: 61 VNRMFEDLIDCKRILR-EITILNRLKSDYIIRLHDLI--IPEDLLKFDELYIVLEIADSD 117
Query: 563 YRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGL 622
+K+ +P L + I + G F+HE +H +LKP N LL D KI DFGL
Sbjct: 118 LKKLFKTPIFLTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGL 177
Query: 623 ERLVTGD 629
R + D
Sbjct: 178 ARTINSD 184
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 39/208 (18%)
Query: 500 TALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLA 559
A+ V + G D + + +++ +L +P +VR+ G + +++ + G L
Sbjct: 366 VAIKVLKQGTEKADT-EEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPL- 422
Query: 560 NARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGD 619
++ + +P ++ V+ G+ +L EK VH NL RNVLL N KI D
Sbjct: 423 ---HKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISD 479
Query: 620 FGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYH 679
FGL SKA G+ ++ + RS ++
Sbjct: 480 FGL----------SKALGADDSYYTARSAGK-----------------------WPLKWY 506
Query: 680 APESLRSIKPNPKWDVYSFGVILLELLT 707
APE + K + + DV+S+GV + E L+
Sbjct: 507 APECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 518 FETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEA 577
F +++KL H +LV G DE +++ +FV GSL Y K + ++ W
Sbjct: 59 FFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDT--YLKKNKNCINILW-- 114
Query: 578 RLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGD 619
+L++AK +A + FL E +HGN+ +N+LL + + K G+
Sbjct: 115 KLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGN 156
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 5/101 (4%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ + A L HPN++R+ +++ +I ++ P G L Y+++ S C +
Sbjct: 73 EIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGEL----YKELQKS-CTFDEQRTAT 127
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFG 621
I + +A L + H KK +H ++KP N+LLG E KI DFG
Sbjct: 128 IMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFG 168
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 76/193 (39%), Gaps = 51/193 (26%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL-----ANARYRKMGSSPCHLPW 575
+VR++ L HPN+V++ +I ++ G + A+ R ++
Sbjct: 61 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK--------- 111
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635
EAR K + + + + H+K+ VH +LK N+LL DM KI DFG T
Sbjct: 112 EARSKF-RQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT-------V 163
Query: 636 GGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDV 695
GG F A+ + FQ Y PE DV
Sbjct: 164 GGKLDTFCGSPPYAAPELFQG-------------------KKYDGPEV----------DV 194
Query: 696 YSFGVILLELLTG 708
+S GVIL L++G
Sbjct: 195 WSLGVILYTLVSG 207
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 87/201 (43%), Gaps = 12/201 (5%)
Query: 436 SGRKLSVDNQRQQDHV--HERQNKKGTLVIVDGDKELELETLLKASAYILGASGSSIMYK 493
SG L +N Q V HE+ +V+ GD L L++ +K G++G + +
Sbjct: 9 SGVDLGTENLYFQSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGE---GSTGIVCLAR 65
Query: 494 AVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553
G +AV+ + R +V ++ H N+V + Y +E ++ +F+
Sbjct: 66 EK-HSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFL 124
Query: 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDM 613
G+L + S L E + + V + LA+LH + +H ++K ++LL D
Sbjct: 125 QGGALTDI------VSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDG 178
Query: 614 EPKIGDFGLERLVTGDTSSSK 634
K+ DFG ++ D K
Sbjct: 179 RVKLSDFGFCAQISKDVPKRK 199
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 98/232 (42%), Gaps = 48/232 (20%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIA---KLVHPNLVRIRGF 539
+G ++YKA G +A++RI ++ D T +R I+ +L HPN+V +
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIP-STAIREISLLKELHHPNIVSLIDV 87
Query: 540 YWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKI-AKGVARGLAFLHEKKHV 598
++++F+ K G ++++KI + RG+A H+ + +
Sbjct: 88 IHSERCLTLVFEFMEKDLKKVLDENKTGLQ------DSQIKIYLYQLLRGVAHCHQHRIL 141
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLX 658
H +LKP+N+L+ +D K+ DFGL AR FG + + +
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGL----------------ARAFGIPVRSYTHE------ 179
Query: 659 XXXXXXXXXXXXXXXXXXXYHAPESLR-SIKPNPKWDVYSFGVILLELLTGK 709
Y AP+ L S K + D++S G I E++TGK
Sbjct: 180 --------------VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 55/218 (25%)
Query: 499 GTALAVRRIGENSVDR--FRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556
G +AVR I + ++ + +VR++ L HPN+V++ ++ ++ G
Sbjct: 39 GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 557 SL-----ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN 611
+ A+ R ++ EAR K + + + + H+K VH +LK N+LL
Sbjct: 99 EVFDYLVAHGRMKEK---------EARAKF-RQIVSAVQYCHQKFIVHRDLKAENLLLDA 148
Query: 612 DMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXX 671
DM KI DFG T FG+K D F
Sbjct: 149 DMNIKIADFGFSNEFT--------------FGNK-----LDEF----------------- 172
Query: 672 XXXXXXYHAPESLRSIKPN-PKWDVYSFGVILLELLTG 708
Y APE + K + P+ DV+S GVIL L++G
Sbjct: 173 -CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 98/232 (42%), Gaps = 48/232 (20%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIA---KLVHPNLVRIRGF 539
+G ++YKA G +A++RI ++ D T +R I+ +L HPN+V +
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIP-STAIREISLLKELHHPNIVSLIDV 87
Query: 540 YWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKI-AKGVARGLAFLHEKKHV 598
++++F+ K G ++++KI + RG+A H+ + +
Sbjct: 88 IHSERCLTLVFEFMEKDLKKVLDENKTGLQ------DSQIKIYLYQLLRGVAHCHQHRIL 141
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLX 658
H +LKP+N+L+ +D K+ DFGL AR FG + + +
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGL----------------ARAFGIPVRSYTHE------ 179
Query: 659 XXXXXXXXXXXXXXXXXXXYHAPESLR-SIKPNPKWDVYSFGVILLELLTGK 709
Y AP+ L S K + D++S G I E++TGK
Sbjct: 180 --------------VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 88/218 (40%), Gaps = 55/218 (25%)
Query: 499 GTALAVRRIGENSVDR--FRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556
G +AV+ I + ++ + +VR++ L HPN+V++ ++ ++ G
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 557 SL-----ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN 611
+ A+ R ++ EAR K + + + + H+K VH +LK N+LL
Sbjct: 99 EVFDYLVAHGRMKEK---------EARAKF-RQIVSAVQYCHQKFIVHRDLKAENLLLDA 148
Query: 612 DMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXX 671
DM KI DFG T FG+K T
Sbjct: 149 DMNIKIADFGFSNEFT--------------FGNKLDTFC--------------------- 173
Query: 672 XXXXXXYHAPESLRSIKPN-PKWDVYSFGVILLELLTG 708
Y APE + K + P+ DV+S GVIL L++G
Sbjct: 174 --GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWE 576
+ E +V ++ +++HPN++ + Y + ++I + V G L + +K L E
Sbjct: 61 EIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES-----LSEE 115
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP----KIGDFGL 622
K + G+ +LH KK H +LKP N++L + P K+ DFGL
Sbjct: 116 EATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 76/193 (39%), Gaps = 51/193 (26%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL-----ANARYRKMGSSPCHLPW 575
+VR++ L HPN+V++ +I ++ G + A+ R ++
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK--------- 114
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635
EAR K + + + + H+K+ VH +LK N+LL DM KI DFG T
Sbjct: 115 EARSKF-RQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFT-------V 166
Query: 636 GGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDV 695
GG F A+ + FQ Y PE DV
Sbjct: 167 GGKLDAFCGAPPYAAPELFQG-------------------KKYDGPEV----------DV 197
Query: 696 YSFGVILLELLTG 708
+S GVIL L++G
Sbjct: 198 WSLGVILYTLVSG 210
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 88/218 (40%), Gaps = 55/218 (25%)
Query: 499 GTALAVRRIGENSVDR--FRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556
G +AV+ I + ++ + +VR++ L HPN+V++ ++ ++ G
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 557 SL-----ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN 611
+ A+ R ++ EAR K + + + + H+K VH +LK N+LL
Sbjct: 99 EVFDYLVAHGRMKEK---------EARAKF-RQIVSAVQYCHQKFIVHRDLKAENLLLDA 148
Query: 612 DMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXX 671
DM KI DFG T FG+K T
Sbjct: 149 DMNIKIADFGFSNEFT--------------FGNKLDTFC--------------------- 173
Query: 672 XXXXXXYHAPESLRSIKPN-PKWDVYSFGVILLELLTG 708
Y APE + K + P+ DV+S GVIL L++G
Sbjct: 174 --GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 97/237 (40%), Gaps = 56/237 (23%)
Query: 482 ILG-ASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIA-KLVHPNLVRI 536
+LG S +M V E G AV+ + ++ + + D E T+ R+++ HP L ++
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL 89
Query: 537 RGFYWGVDEKLIIYDFVPNGSLAN--ARYRKMGSSPCHLPWEARLKI-AKGVARGLAFLH 593
+ D + +FV G L + R+ EAR + A + L FLH
Sbjct: 90 FCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFD--------EARARFYAAEIISALMFLH 141
Query: 594 EKKHVHGNLKPRNVLLGNDMEPKIGDFGL--ERLVTGDTSSSKAGGSARNFGSKRSTASR 651
+K ++ +LK NVLL ++ K+ DFG+ E + G T+++ G
Sbjct: 142 DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTP------------- 188
Query: 652 DSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTG 708
Y APE L+ + P D ++ GV+L E+L G
Sbjct: 189 -------------------------DYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 530 HPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGL 589
HPN+++++ Y +++D + G L + K+ S E R KI + + +
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSE----KETR-KIMRALLEVI 124
Query: 590 AFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGL 622
LH+ VH +LKP N+LL +DM K+ DFG
Sbjct: 125 CALHKLNIVHRDLKPENILLDDDMNIKLTDFGF 157
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 121/266 (45%), Gaps = 65/266 (24%)
Query: 459 GTLVIVDGDKELELETLLKASAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDF 518
G+L ++D KE+E+E ++ GA G K +D +A+++I E+ +R + F
Sbjct: 1 GSLHMID-YKEIEVEEVVGR-----GAFGVVCKAKWRAKD---VAIKQI-ESESER-KAF 49
Query: 519 ETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEA- 577
++R ++++ HPN+V++ G ++ ++ ++ GSL N + G+ P LP+
Sbjct: 50 IVELRQLSRVNHPNIVKLYGA--CLNPVCLVMEYAEGGSLYNVLH---GAEP--LPYYTA 102
Query: 578 --RLKIAKGVARGLAFLHE---KKHVHGNLKPRNVLL-GNDMEPKIGDFGLERLVTGDTS 631
+ ++G+A+LH K +H +LKP N+LL KI DFG + +
Sbjct: 103 AHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMT 162
Query: 632 SSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNP 691
++K GSA + APE +
Sbjct: 163 NNK--GSA-------------------------------------AWMAPEVFEGSNYSE 183
Query: 692 KWDVYSFGVILLELLTGKVIVVDELG 717
K DV+S+G+IL E++T + DE+G
Sbjct: 184 KCDVFSWGIILWEVITRRK-PFDEIG 208
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 90/231 (38%), Gaps = 50/231 (21%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFET---QVRVIAKLVHPNLVRIRGFY 540
G+ G I+ K + G AV+ I + V + D E+ +V+++ +L HPN+ ++ F+
Sbjct: 37 GSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFF 95
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHG 600
++ + G L + + S +I + V G+ + H+ K VH
Sbjct: 96 EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA-----RIIRQVLSGITYXHKNKIVHR 150
Query: 601 NLKPRNVLL---GNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDL 657
+LKP N+LL D +I DFGL G+A
Sbjct: 151 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTA------------------ 192
Query: 658 XXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTG 708
Y APE L + K DV+S GVIL LL+G
Sbjct: 193 -------------------YYIAPEVLHGT-YDEKCDVWSTGVILYILLSG 223
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 530 HPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGL 589
HPN+++++ Y +++D + G L + K+ S E R KI + + +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSE----KETR-KIMRALLEVI 137
Query: 590 AFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGL 622
LH+ VH +LKP N+LL +DM K+ DFG
Sbjct: 138 CALHKLNIVHRDLKPENILLDDDMNIKLTDFGF 170
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 102/260 (39%), Gaps = 50/260 (19%)
Query: 452 HERQNKKGTLVIVDGDKELELETLLKASAYILGASGSSIMYKA-VLEDGTALAVRRIGEN 510
HE+ LV+ GD L+ +K +G + I+ A V G +AV+++
Sbjct: 6 HEQFRAALQLVVDPGDPRSYLDNFIK-----IGEGSTGIVCIATVRSSGKLVAVKKMDLR 60
Query: 511 SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSS 569
R +V ++ H N+V + Y DE ++ +F+ G+L + + +M
Sbjct: 61 KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE- 119
Query: 570 PCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGD 629
E + V + L+ LH + +H ++K ++LL +D K+ DFG V+ +
Sbjct: 120 ------EQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 173
Query: 630 TSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKP 689
K + APE + +
Sbjct: 174 VPRRKX------------------------------------LVGTPYWMAPELISRLPY 197
Query: 690 NPKWDVYSFGVILLELLTGK 709
P+ D++S G++++E++ G+
Sbjct: 198 GPEVDIWSLGIMVIEMVDGE 217
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Query: 530 HPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGL 589
HPN+++++ Y +++D + G L + K+ S E R KI + + +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSE----KETR-KIMRALLEVI 137
Query: 590 AFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGL 622
LH+ VH +LKP N+LL +DM K+ DFG
Sbjct: 138 CALHKLNIVHRDLKPENILLDDDMNIKLTDFGF 170
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 81/211 (38%), Gaps = 39/211 (18%)
Query: 498 DGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556
D T +AV+ E D F + R++ + HPN+VR+ G I+ + V G
Sbjct: 138 DNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 197
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
+ + L + L++ A G+ +L K +H +L RN L+ K
Sbjct: 198 DFLTF----LRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLK 253
Query: 617 IGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXX 676
I DFG+ R +A G G R +
Sbjct: 254 ISDFGMSR--------EEADGVXAASGGLRQVPVK------------------------- 280
Query: 677 XYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ APE+L + + + DV+SFG++L E +
Sbjct: 281 -WTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 94/191 (49%), Gaps = 25/191 (13%)
Query: 456 NKKGTLVIVDGDKELELETLLKASAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRF 515
NK ++ DG K E + + ++G ++++A L + +A++++ ++ RF
Sbjct: 22 NKVIKVLASDG-KTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK--RF 78
Query: 516 RDFETQVRVIAKLVHPNLVRIRGFYWGVDEKL------IIYDFVPNGSLANAR-YRKMGS 568
++ E Q+ I K HPN+V ++ F++ +K ++ ++VP +R Y K+
Sbjct: 79 KNRELQIMRIVK--HPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQ 136
Query: 569 SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP-----KIGDFGLE 623
+ +P + R LA++H H ++KP+N+LL +P K+ DFG
Sbjct: 137 T---MPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLL----DPPSGVLKLIDFGSA 189
Query: 624 R-LVTGDTSSS 633
+ L+ G+ + S
Sbjct: 190 KILIAGEPNVS 200
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 102/260 (39%), Gaps = 50/260 (19%)
Query: 452 HERQNKKGTLVIVDGDKELELETLLKASAYILGASGSSIMYKA-VLEDGTALAVRRIGEN 510
HE+ LV+ GD L+ +K +G + I+ A V G +AV+++
Sbjct: 2 HEQFRAALQLVVDPGDPRSYLDNFIK-----IGEGSTGIVCIATVRSSGKLVAVKKMDLR 56
Query: 511 SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSS 569
R +V ++ H N+V + Y DE ++ +F+ G+L + + +M
Sbjct: 57 KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE- 115
Query: 570 PCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGD 629
E + V + L+ LH + +H ++K ++LL +D K+ DFG V+ +
Sbjct: 116 ------EQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 169
Query: 630 TSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKP 689
K + APE + +
Sbjct: 170 VPRRKX------------------------------------LVGTPYWMAPELISRLPY 193
Query: 690 NPKWDVYSFGVILLELLTGK 709
P+ D++S G++++E++ G+
Sbjct: 194 GPEVDIWSLGIMVIEMVDGE 213
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 90/218 (41%), Gaps = 55/218 (25%)
Query: 499 GTALAVRRIGENSVDR--FRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556
G +AV+ I + ++ + +VR++ L HPN+V++ ++ ++ G
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 557 SL-----ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN 611
+ A+ R ++ EAR K + + + + H+K VH +LK N+LL
Sbjct: 99 EVFDYLVAHGRMKEK---------EARAKF-RQIVSAVQYCHQKFIVHRDLKAENLLLDA 148
Query: 612 DMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXX 671
DM KI DFG T FG+K D+F
Sbjct: 149 DMNIKIADFGFSNEFT--------------FGNK-----LDAF----------------- 172
Query: 672 XXXXXXYHAPESLRSIKPN-PKWDVYSFGVILLELLTG 708
Y APE + K + P+ DV+S GVIL L++G
Sbjct: 173 -CGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 102/253 (40%), Gaps = 64/253 (25%)
Query: 475 LLKASAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRD-FETQVRVIAKL-VHPN 532
++ A+AY + +G SI +AV+ + E + R+ ++++++ +L H N
Sbjct: 61 VMNATAYGISKTGVSI----------QVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 533 LVRIRGFYWGVDEKLIIYDFVPNGSLAN---ARYRKMGSSPCH---------------LP 574
+V + G +I+++ G L N ++ K L
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170
Query: 575 WEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634
+E L A VA+G+ FL K VH +L RNVL+ + KI DFGL R + D S+
Sbjct: 171 FEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSD-SNYV 229
Query: 635 AGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWD 694
G+AR + APESL K D
Sbjct: 230 VRGNAR---------------------------------LPVKWMAPESLFEGIYTIKSD 256
Query: 695 VYSFGVILLELLT 707
V+S+G++L E+ +
Sbjct: 257 VWSYGILLWEIFS 269
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 104/260 (40%), Gaps = 66/260 (25%)
Query: 469 ELELETLLKASAYIL-GASGSSIMYKAVLEDGTALAVRRIGEN-SVDRFRDFETQVRVIA 526
E E ++KA+A+ L G +G T +AV+ + EN S RD ++ V+
Sbjct: 33 EGEFGKVVKATAFHLKGRAGY-----------TTVAVKMLKENASPSELRDLLSEFNVLK 81
Query: 527 KLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHL------------- 573
++ HP+++++ G L+I ++ GSL P +L
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 574 PWEARLKI------AKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVT 627
P E L + A +++G+ +L E VH +L RN+L+ + KI DFGL R V
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVY 201
Query: 628 GDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSI 687
+ S KRS + A ESL
Sbjct: 202 EEDSX-----------VKRSQGR-----------------------IPVKWMAIESLFDH 227
Query: 688 KPNPKWDVYSFGVILLELLT 707
+ DV+SFGV+L E++T
Sbjct: 228 IYTTQSDVWSFGVLLWEIVT 247
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 39/208 (18%)
Query: 500 TALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLA 559
A+ V + G D + + +++ +L +P +VR+ G + +++ + G L
Sbjct: 40 VAIKVLKQGTEKADT-EEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPL- 96
Query: 560 NARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGD 619
++ + +P ++ V+ G+ +L EK VH +L RNVLL N KI D
Sbjct: 97 ---HKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISD 153
Query: 620 FGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYH 679
FGL SKA G+ ++ + RS ++
Sbjct: 154 FGL----------SKALGADDSYYTARSAGK-----------------------WPLKWY 180
Query: 680 APESLRSIKPNPKWDVYSFGVILLELLT 707
APE + K + + DV+S+GV + E L+
Sbjct: 181 APECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 53/243 (21%)
Query: 484 GASGSSIMYKAVLEDG------TALAVRRIGENSVDR-FRDFETQVRVIAKL-VHPNLVR 535
GA G ++ +A+ D T +AV+ + ++ ++ D +++ ++ + H N++
Sbjct: 39 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIIN 98
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLA---NARY---RKMGSSPCHLPWEAR-----LKIAKG 584
+ G +I ++ G+L AR + +P H P E + A
Sbjct: 99 LLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQ 158
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
VARG+ +L KK +H +L RNVL+ D KI DFGL R +
Sbjct: 159 VARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDX------------X 206
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
K++T R + + APE+L + DV+SFGV+L E
Sbjct: 207 KKTTNGRLPVK----------------------WMAPEALFDRIYTHQSDVWSFGVLLWE 244
Query: 705 LLT 707
+ T
Sbjct: 245 IFT 247
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 81/211 (38%), Gaps = 39/211 (18%)
Query: 498 DGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556
D T +AV+ E D F + R++ + HPN+VR+ G I+ + V G
Sbjct: 138 DNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 197
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
+ + L + L++ A G+ +L K +H +L RN L+ K
Sbjct: 198 DFLTF----LRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLK 253
Query: 617 IGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXX 676
I DFG+ R +A G G R +
Sbjct: 254 ISDFGMSR--------EEADGVYAASGGLRQVPVK------------------------- 280
Query: 677 XYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ APE+L + + + DV+SFG++L E +
Sbjct: 281 -WTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 75/188 (39%), Gaps = 39/188 (20%)
Query: 520 TQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARL 579
+ V+ +L +P +VR+ G + +++ + G L K H+ + +
Sbjct: 61 AEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPL-----NKYLQQNRHVKDKNII 114
Query: 580 KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639
++ V+ G+ +L E VH +L RNVLL KI DFGL + + D + KA
Sbjct: 115 ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHG 174
Query: 640 RNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFG 699
+ ++APE + K + K DV+SFG
Sbjct: 175 K---------------------------------WPVKWYAPECINYYKFSSKSDVWSFG 201
Query: 700 VILLELLT 707
V++ E +
Sbjct: 202 VLMWEAFS 209
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 75/188 (39%), Gaps = 39/188 (20%)
Query: 520 TQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARL 579
+ V+ +L +P +VR+ G + +++ + G L K H+ + +
Sbjct: 57 AEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPL-----NKYLQQNRHVKDKNII 110
Query: 580 KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639
++ V+ G+ +L E VH +L RNVLL KI DFGL + + D + KA
Sbjct: 111 ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 170
Query: 640 RNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFG 699
+ ++APE + K + K DV+SFG
Sbjct: 171 K---------------------------------WPVKWYAPECINYYKFSSKSDVWSFG 197
Query: 700 VILLELLT 707
V++ E +
Sbjct: 198 VLMWEAFS 205
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 75/188 (39%), Gaps = 39/188 (20%)
Query: 520 TQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARL 579
+ V+ +L +P +VR+ G + +++ + G L K H+ + +
Sbjct: 55 AEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPL-----NKYLQQNRHVKDKNII 108
Query: 580 KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639
++ V+ G+ +L E VH +L RNVLL KI DFGL + + D + KA
Sbjct: 109 ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 168
Query: 640 RNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFG 699
+ ++APE + K + K DV+SFG
Sbjct: 169 K---------------------------------WPVKWYAPECINYYKFSSKSDVWSFG 195
Query: 700 VILLELLT 707
V++ E +
Sbjct: 196 VLMWEAFS 203
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 52/129 (40%), Gaps = 33/129 (25%)
Query: 579 LKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638
+++ V+ G+ +L E VH +L RNVLL KI DFGL + + D + KA
Sbjct: 130 IELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 189
Query: 639 ARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSF 698
+ ++APE + K + K DV+SF
Sbjct: 190 GK---------------------------------WPVKWYAPECINYYKFSSKSDVWSF 216
Query: 699 GVILLELLT 707
GV++ E +
Sbjct: 217 GVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 52/129 (40%), Gaps = 33/129 (25%)
Query: 579 LKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638
+++ V+ G+ +L E VH +L RNVLL KI DFGL + + D + KA
Sbjct: 130 IELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 189
Query: 639 ARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSF 698
+ ++APE + K + K DV+SF
Sbjct: 190 GK---------------------------------WPVKWYAPECINYYKFSSKSDVWSF 216
Query: 699 GVILLELLT 707
GV++ E +
Sbjct: 217 GVLMWEAFS 225
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 44/190 (23%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+++V+ + P +V G ++ E I + + GSL ++ +P E K
Sbjct: 64 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD-----QVLKEAKRIPEEILGK 118
Query: 581 IAKGVARGLAFLHEKKHV-HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639
++ V RGLA+L EK + H ++KP N+L+ + E K+ DFG V+G S A
Sbjct: 119 VSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMAN--- 171
Query: 640 RNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFG 699
+F RS Y APE L+ + + D++S G
Sbjct: 172 -SFVGTRS------------------------------YMAPERLQGTHYSVQSDIWSMG 200
Query: 700 VILLELLTGK 709
+ L+EL G+
Sbjct: 201 LSLVELAVGR 210
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 70/151 (46%), Gaps = 15/151 (9%)
Query: 482 ILGASGSSIMYKAVLE-DGTALAVR-------RIGENSVDRFRDFETQVRVIAKLV--HP 531
++G SS++ + V G AV+ R+ ++ R+ + I + V HP
Sbjct: 101 VIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHP 160
Query: 532 NLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAF 591
+++ + Y +++D + G L + K+ S E R I + + ++F
Sbjct: 161 HIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEK----ETR-SIMRSLLEAVSF 215
Query: 592 LHEKKHVHGNLKPRNVLLGNDMEPKIGDFGL 622
LH VH +LKP N+LL ++M+ ++ DFG
Sbjct: 216 LHANNIVHRDLKPENILLDDNMQIRLSDFGF 246
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 86/213 (40%), Gaps = 45/213 (21%)
Query: 499 GTALAVRRIGENSVDR--FRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556
G +AV+ I + ++ + +VR++ L HPN+V++ ++ ++ G
Sbjct: 32 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 91
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
+ + + + EAR K + + + + H+K VH +LK N+LL DM K
Sbjct: 92 EV----FDYLVAHGWMKEKEARAKF-RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIK 146
Query: 617 IGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXX 676
I DFG T FG+K T
Sbjct: 147 IADFGFSNEFT--------------FGNKLDTFC-----------------------GSP 169
Query: 677 XYHAPESLRSIKPN-PKWDVYSFGVILLELLTG 708
Y APE + K + P+ DV+S GVIL L++G
Sbjct: 170 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWE 576
D E +V ++ ++ HPN++ + Y + ++I + V G L + K L E
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEE 114
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP----KIGDFGL 622
+ K + G+ +LH + H +LKP N++L + P KI DFGL
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 75/188 (39%), Gaps = 39/188 (20%)
Query: 520 TQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARL 579
+ V+ +L +P +VR+ G + +++ + G L K H+ + +
Sbjct: 61 AEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPL-----NKYLQQNRHVKDKNII 114
Query: 580 KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639
++ V+ G+ +L E VH +L RNVLL KI DFGL + + D + KA
Sbjct: 115 ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 174
Query: 640 RNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFG 699
+ ++APE + K + K DV+SFG
Sbjct: 175 K---------------------------------WPVKWYAPECINYYKFSSKSDVWSFG 201
Query: 700 VILLELLT 707
V++ E +
Sbjct: 202 VLMWEAFS 209
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 128/321 (39%), Gaps = 74/321 (23%)
Query: 484 GASGSSIMYKAVLEDG------TALAVRRIGENSVDR-FRDFETQVRVIAKL-VHPNLVR 535
GA G ++ +A+ D T +AV+ + ++ ++ D +++ ++ + H N++
Sbjct: 80 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIIN 139
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLA---NARY---RKMGSSPCHLPWEAR-----LKIAKG 584
+ G +I ++ G+L AR + +P H P E + A
Sbjct: 140 LLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQ 199
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
VARG+ +L KK +H +L RNVL+ D KI DFGL R +
Sbjct: 200 VARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY------------Y 247
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
K++T R + + APE+L + DV+SFGV+L E
Sbjct: 248 KKTTNGRLPVK----------------------WMAPEALFDRIYTHQSDVWSFGVLLWE 285
Query: 705 LLT-----GKVIVVDELGQGNGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSC 759
+ T + V+EL + LL E + + + C
Sbjct: 286 IFTLGGSPYPGVPVEELFK---LLKEGHR-------------MDKPSNCTNELYMMMRDC 329
Query: 760 ASPLPQKRPSMKEALQALEKI 780
+P +RP+ K+ ++ L++I
Sbjct: 330 WHAVPSQRPTFKQLVEDLDRI 350
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 75/188 (39%), Gaps = 39/188 (20%)
Query: 520 TQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARL 579
+ V+ +L +P +VR+ G + +++ + G L K H+ + +
Sbjct: 67 AEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPL-----NKYLQQNRHVKDKNII 120
Query: 580 KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639
++ V+ G+ +L E VH +L RNVLL KI DFGL + + D + KA
Sbjct: 121 ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 180
Query: 640 RNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFG 699
+ ++APE + K + K DV+SFG
Sbjct: 181 K---------------------------------WPVKWYAPECINYYKFSSKSDVWSFG 207
Query: 700 VILLELLT 707
V++ E +
Sbjct: 208 VLMWEAFS 215
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 75/188 (39%), Gaps = 39/188 (20%)
Query: 520 TQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARL 579
+ V+ +L +P +VR+ G + +++ + G L K H+ + +
Sbjct: 75 AEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPL-----NKYLQQNRHVKDKNII 128
Query: 580 KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639
++ V+ G+ +L E VH +L RNVLL KI DFGL + + D + KA
Sbjct: 129 ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 188
Query: 640 RNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFG 699
+ ++APE + K + K DV+SFG
Sbjct: 189 K---------------------------------WPVKWYAPECINYYKFSSKSDVWSFG 215
Query: 700 VILLELLT 707
V++ E +
Sbjct: 216 VLMWEAFS 223
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWE 576
D E +V ++ ++ HPN++ + Y + ++I + V G L + K L E
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEE 114
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP----KIGDFGL 622
+ K + G+ +LH + H +LKP N++L + P KI DFGL
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWE 576
D E +V ++ ++ HPN++ + Y + ++I + V G L + K L E
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEE 114
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP----KIGDFGL 622
+ K + G+ +LH + H +LKP N++L + P KI DFGL
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 77/199 (38%), Gaps = 44/199 (22%)
Query: 518 FETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEA 577
E ++ + L HP+++++ DE +++ ++ N R S EA
Sbjct: 61 IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ-----EA 115
Query: 578 RLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637
R + + + + + H K VH +LKP N+LL + KI DFGL ++T + G
Sbjct: 116 R-RFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG 174
Query: 638 SARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLR-SIKPNPKWDVY 696
S Y APE + + P+ DV+
Sbjct: 175 SPN-------------------------------------YAAPEVISGKLYAGPEVDVW 197
Query: 697 SFGVILLELLTGKVIVVDE 715
S GVIL +L ++ DE
Sbjct: 198 SCGVILYVMLCRRLPFDDE 216
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 77/199 (38%), Gaps = 44/199 (22%)
Query: 518 FETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEA 577
E ++ + L HP+++++ DE +++ ++ N R S EA
Sbjct: 55 IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ-----EA 109
Query: 578 RLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637
R + + + + + H K VH +LKP N+LL + KI DFGL ++T + G
Sbjct: 110 R-RFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG 168
Query: 638 SARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLR-SIKPNPKWDVY 696
S Y APE + + P+ DV+
Sbjct: 169 SPN-------------------------------------YAAPEVISGKLYAGPEVDVW 191
Query: 697 SFGVILLELLTGKVIVVDE 715
S GVIL +L ++ DE
Sbjct: 192 SCGVILYVMLCRRLPFDDE 210
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWE 576
D E +V ++ ++ HPN++ + Y + ++I + V G L + K L E
Sbjct: 59 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEE 113
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP----KIGDFGL 622
+ K + G+ +LH + H +LKP N++L + P KI DFGL
Sbjct: 114 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 163
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 77/199 (38%), Gaps = 44/199 (22%)
Query: 518 FETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEA 577
E ++ + L HP+++++ DE +++ ++ N R S EA
Sbjct: 60 IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ-----EA 114
Query: 578 RLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637
R + + + + + H K VH +LKP N+LL + KI DFGL ++T + G
Sbjct: 115 R-RFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG 173
Query: 638 SARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLR-SIKPNPKWDVY 696
S Y APE + + P+ DV+
Sbjct: 174 SPN-------------------------------------YAAPEVISGKLYAGPEVDVW 196
Query: 697 SFGVILLELLTGKVIVVDE 715
S GVIL +L ++ DE
Sbjct: 197 SCGVILYVMLCRRLPFDDE 215
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWE 576
D E +V ++ ++ HPN++ + Y + ++I + V G L + K L E
Sbjct: 59 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEE 113
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP----KIGDFGL 622
+ K + G+ +LH + H +LKP N++L + P KI DFGL
Sbjct: 114 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 163
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%)
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
+A++ +K+ +P L E I + G F+HE +H +LKP N LL D K
Sbjct: 110 EIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVK 169
Query: 617 IGDFGLERLVTGDTSSSKAGGSARN 641
+ DFGL R + + ++ N
Sbjct: 170 VCDFGLARTINSEKDTNIVNDLEEN 194
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWE 576
D E +V ++ ++ HPN++ + Y + ++I + V G L + K L E
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEE 114
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP----KIGDFGL 622
+ K + G+ +LH + H +LKP N++L + P KI DFGL
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 51/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T AG A +
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMAGFVATRW-- 187
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 188 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 215 ELLTGRTL 222
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 77/199 (38%), Gaps = 44/199 (22%)
Query: 518 FETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEA 577
E ++ + L HP+++++ DE +++ ++ N R S EA
Sbjct: 51 IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ-----EA 105
Query: 578 RLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637
R + + + + + H K VH +LKP N+LL + KI DFGL ++T + G
Sbjct: 106 R-RFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCG 164
Query: 638 SARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLR-SIKPNPKWDVY 696
S Y APE + + P+ DV+
Sbjct: 165 SPN-------------------------------------YAAPEVISGKLYAGPEVDVW 187
Query: 697 SFGVILLELLTGKVIVVDE 715
S GVIL +L ++ DE
Sbjct: 188 SCGVILYVMLCRRLPFDDE 206
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWE 576
D E +V ++ ++ HPN++ + Y + ++I + V G L + K L E
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEE 114
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP----KIGDFGL 622
+ K + G+ +LH + H +LKP N++L + P KI DFGL
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 51/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T AG A +
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMAGFVATRW-- 187
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 188 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 215 ELLTGRTL 222
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWE 576
D E +V ++ ++ HPN++ + Y + ++I + V G L + K L E
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEE 114
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP----KIGDFGL 622
+ K + G+ +LH + H +LKP N++L + P KI DFGL
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWE 576
D E +V ++ ++ HPN++ + Y + ++I + V G L + K L E
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEE 114
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP----KIGDFGL 622
+ K + G+ +LH + H +LKP N++L + P KI DFGL
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWE 576
D E +V ++ ++ HPN++ + Y + ++I + V G L + K L E
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEE 114
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP----KIGDFGL 622
+ K + G+ +LH + H +LKP N++L + P KI DFGL
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWE 576
D E +V ++ ++ HPN++ + Y + ++I + V G L + K L E
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEE 114
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP----KIGDFGL 622
+ K + G+ +LH + H +LKP N++L + P KI DFGL
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWE 576
D E +V ++ ++ HPN++ + Y + ++I + V G L + K L E
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEE 114
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP----KIGDFGL 622
+ K + G+ +LH + H +LKP N++L + P KI DFGL
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWE 576
D E +V ++ ++ HPN++ + Y + ++I + V G L + K L E
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-----LTEE 114
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP----KIGDFGL 622
+ K + G+ +LH + H +LKP N++L + P KI DFGL
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 85/218 (38%), Gaps = 55/218 (25%)
Query: 499 GTALAVRRIGENSVD--RFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556
G +AV+ I + ++ + +VR++ L HPN+V++ ++ ++ G
Sbjct: 40 GREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGG 99
Query: 557 SL-----ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN 611
+ A+ R ++ EAR K + + + + H+K VH +LK N+LL
Sbjct: 100 EVFDYLVAHGRMKEK---------EARAKF-RQIVSAVQYCHQKYIVHRDLKAENLLLDG 149
Query: 612 DMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXX 671
DM KI DFG T GS
Sbjct: 150 DMNIKIADFGFSNEFTVGNKLDTFCGSP-------------------------------- 177
Query: 672 XXXXXXYHAPESLRSIKPN-PKWDVYSFGVILLELLTG 708
Y APE + K + P+ DV+S GVIL L++G
Sbjct: 178 -----PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 85/180 (47%), Gaps = 16/180 (8%)
Query: 456 NKKGTLVIVDGDKELELETLLKASAYILGASGSSIMYKAV-LEDGTALAVR---RIGENS 511
++K V+ KE EL L +LG+ ++K V + +G ++ + ++ E+
Sbjct: 17 SEKANKVLARIFKETELRKL-----KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDK 71
Query: 512 VDR--FRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSS 569
R F+ + I L H ++VR+ G G +L+ ++P GSL + + G+
Sbjct: 72 SGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLVT-QYLPLGSLLDHVRQHRGAL 130
Query: 570 PCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGD 629
L L +A+G+ +L E VH NL RNVLL + + ++ DFG+ L+ D
Sbjct: 131 GPQL----LLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 186
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 51/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T AG A +
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMAGFVATRW-- 183
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 184 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 210
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 211 ELLTGRTL 218
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 51/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 187
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L ++ N D++S G I+
Sbjct: 188 ---------------------------------YRAPEIMLNAMHYNQTVDIWSVGCIMA 214
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 215 ELLTGRTL 222
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 115/257 (44%), Gaps = 64/257 (24%)
Query: 468 KELELETLLKASAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAK 527
KE+E+E ++ GA G K +D +A+++I E+ +R + F ++R +++
Sbjct: 8 KEIEVEEVVGR-----GAFGVVCKAKWRAKD---VAIKQI-ESESER-KAFIVELRQLSR 57
Query: 528 LVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEA---RLKIAKG 584
+ HPN+V++ G ++ ++ ++ GSL N + G+ P LP+ +
Sbjct: 58 VNHPNIVKLYGA--CLNPVCLVMEYAEGGSLYNVLH---GAEP--LPYYTAAHAMSWCLQ 110
Query: 585 VARGLAFLHE---KKHVHGNLKPRNVLL-GNDMEPKIGDFGLERLVTGDTSSSKAGGSAR 640
++G+A+LH K +H +LKP N+LL KI DFG + +++K GSA
Sbjct: 111 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK--GSA- 167
Query: 641 NFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGV 700
+ APE + K DV+S+G+
Sbjct: 168 ------------------------------------AWMAPEVFEGSNYSEKCDVFSWGI 191
Query: 701 ILLELLTGKVIVVDELG 717
IL E++T + DE+G
Sbjct: 192 ILWEVITRRK-PFDEIG 207
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 53/243 (21%)
Query: 484 GASGSSIMYKAVLEDG------TALAVRRIGENSVDR-FRDFETQVRVIAKL-VHPNLVR 535
GA G ++ +A+ D T +AV+ + ++ ++ D +++ ++ + H N++
Sbjct: 31 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIIN 90
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLA---NARY---RKMGSSPCHLPWEAR-----LKIAKG 584
+ G +I ++ G+L AR + +P H P E + A
Sbjct: 91 LLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQ 150
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
VARG+ +L KK +H +L RNVL+ D KI DFGL R +
Sbjct: 151 VARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY------------Y 198
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
K++T R + + APE+L + DV+SFGV+L E
Sbjct: 199 KKTTNGRLPVK----------------------WMAPEALFDRIYTHQSDVWSFGVLLWE 236
Query: 705 LLT 707
+ T
Sbjct: 237 IFT 239
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 53/243 (21%)
Query: 484 GASGSSIMYKAVLEDG------TALAVRRIGENSVDR-FRDFETQVRVIAKL-VHPNLVR 535
GA G ++ +A+ D T +AV+ + ++ ++ D +++ ++ + H N++
Sbjct: 28 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIIN 87
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLA---NARY---RKMGSSPCHLPWEAR-----LKIAKG 584
+ G +I ++ G+L AR + +P H P E + A
Sbjct: 88 LLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQ 147
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
VARG+ +L KK +H +L RNVL+ D KI DFGL R +
Sbjct: 148 VARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY------------Y 195
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
K++T R + + APE+L + DV+SFGV+L E
Sbjct: 196 KKTTNGRLPVK----------------------WMAPEALFDRIYTHQSDVWSFGVLLWE 233
Query: 705 LLT 707
+ T
Sbjct: 234 IFT 236
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 76/166 (45%), Gaps = 10/166 (6%)
Query: 483 LGASGSSIMYKAVLED-GTALAVRRIGENSVDRF--RDFETQVRVIAKLVHPNLVRIRGF 539
+G +++K D G +A+++ E+ D + ++R++ +L HPNLV +
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 540 YWGVDEKLIIYDFVPNGSLANA-RYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
+ +++++ + L RY++ P HL I + + F H+ +
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQR--GVPEHL----VKSITWQTLQAVNFCHKHNCI 124
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
H ++KP N+L+ K+ DFG RL+TG + + R + S
Sbjct: 125 HRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRS 170
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 53/243 (21%)
Query: 484 GASGSSIMYKAVLEDG------TALAVRRIGENSVDR-FRDFETQVRVIAKL-VHPNLVR 535
GA G ++ +A+ D T +AV+ + ++ ++ D +++ ++ + H N++
Sbjct: 39 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIIN 98
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLA---NARY---RKMGSSPCHLPWEAR-----LKIAKG 584
+ G +I ++ G+L AR + +P H P E + A
Sbjct: 99 LLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQ 158
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
VARG+ +L KK +H +L RNVL+ D KI DFGL R +
Sbjct: 159 VARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY------------Y 206
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
K++T R + + APE+L + DV+SFGV+L E
Sbjct: 207 KKTTNGRLPVK----------------------WMAPEALFDRIYTHQSDVWSFGVLLWE 244
Query: 705 LLT 707
+ T
Sbjct: 245 IFT 247
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 53/243 (21%)
Query: 484 GASGSSIMYKAVLEDG------TALAVRRIGENSVDR-FRDFETQVRVIAKL-VHPNLVR 535
GA G ++ +A+ D T +AV+ + ++ ++ D +++ ++ + H N++
Sbjct: 39 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIIN 98
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLA---NARY---RKMGSSPCHLPWEAR-----LKIAKG 584
+ G +I ++ G+L AR + +P H P E + A
Sbjct: 99 LLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQ 158
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
VARG+ +L KK +H +L RNVL+ D KI DFGL R +
Sbjct: 159 VARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY------------Y 206
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
K++T R + + APE+L + DV+SFGV+L E
Sbjct: 207 KKTTNGRLPVK----------------------WMAPEALFDRIYTHQSDVWSFGVLLWE 244
Query: 705 LLT 707
+ T
Sbjct: 245 IFT 247
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 53/243 (21%)
Query: 484 GASGSSIMYKAVLEDG------TALAVRRIGENSVDR-FRDFETQVRVIAKL-VHPNLVR 535
GA G ++ +A+ D T +AV+ + ++ ++ D +++ ++ + H N++
Sbjct: 39 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIIN 98
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLA---NARY---RKMGSSPCHLPWEAR-----LKIAKG 584
+ G +I ++ G+L AR + +P H P E + A
Sbjct: 99 LLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQ 158
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
VARG+ +L KK +H +L RNVL+ D KI DFGL R +
Sbjct: 159 VARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY------------Y 206
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
K++T R + + APE+L + DV+SFGV+L E
Sbjct: 207 KKTTNGRLPVK----------------------WMAPEALFDRIYTHQSDVWSFGVLLWE 244
Query: 705 LLT 707
+ T
Sbjct: 245 IFT 247
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 53/243 (21%)
Query: 484 GASGSSIMYKAVLEDG------TALAVRRIGENSVDR-FRDFETQVRVIAKL-VHPNLVR 535
GA G ++ +A+ D T +AV+ + ++ ++ D +++ ++ + H N++
Sbjct: 32 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIIN 91
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLA---NARY---RKMGSSPCHLPWEAR-----LKIAKG 584
+ G +I ++ G+L AR + +P H P E + A
Sbjct: 92 LLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQ 151
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
VARG+ +L KK +H +L RNVL+ D KI DFGL R +
Sbjct: 152 VARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY------------Y 199
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
K++T R + + APE+L + DV+SFGV+L E
Sbjct: 200 KKTTNGRLPVK----------------------WMAPEALFDRIYTHQSDVWSFGVLLWE 237
Query: 705 LLT 707
+ T
Sbjct: 238 IFT 240
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 75/188 (39%), Gaps = 39/188 (20%)
Query: 520 TQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARL 579
+ V+ +L +P +VR+ G + +++ + G L K H+ + +
Sbjct: 419 AEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPL-----NKYLQQNRHVKDKNII 472
Query: 580 KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639
++ V+ G+ +L E VH +L RNVLL KI DFGL + + D + KA
Sbjct: 473 ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 532
Query: 640 RNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFG 699
+ ++APE + K + K DV+SFG
Sbjct: 533 K---------------------------------WPVKWYAPECINYYKFSSKSDVWSFG 559
Query: 700 VILLELLT 707
V++ E +
Sbjct: 560 VLMWEAFS 567
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 47/200 (23%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNGSLANARYRKMGSSPCHLPWEAR 578
++ ++ KL HPN+V++ +E ++++ V G + K S +AR
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSED-----QAR 140
Query: 579 LKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638
+ + +G+ +LH +K +H ++KP N+L+G D KI DFG+ S++ GS
Sbjct: 141 FYF-QDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGV---------SNEFKGS 190
Query: 639 ARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESL---RSIKPNPKWDV 695
+ T + + APESL R I DV
Sbjct: 191 DALLSNTVGTPA---------------------------FMAPESLSETRKIFSGKALDV 223
Query: 696 YSFGVILLELLTGKVIVVDE 715
++ GV L + G+ +DE
Sbjct: 224 WAMGVTLYCFVFGQCPFMDE 243
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 75/188 (39%), Gaps = 39/188 (20%)
Query: 520 TQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARL 579
+ V+ +L +P +VR+ G + +++ + G L K H+ + +
Sbjct: 420 AEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPL-----NKYLQQNRHVKDKNII 473
Query: 580 KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639
++ V+ G+ +L E VH +L RNVLL KI DFGL + + D + KA
Sbjct: 474 ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 533
Query: 640 RNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFG 699
+ ++APE + K + K DV+SFG
Sbjct: 534 K---------------------------------WPVKWYAPECINYYKFSSKSDVWSFG 560
Query: 700 VILLELLT 707
V++ E +
Sbjct: 561 VLMWEAFS 568
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 14/185 (7%)
Query: 452 HERQNKKGTLVIVDGDKELELETLLKASAYILGASGSSIMYKAVLED-GTALAVRRIGEN 510
HE+ LV+ GD L +K +G + I+ A + G +AV+++
Sbjct: 27 HEQFRAALQLVVSPGDPREYLANFIK-----IGEGSTGIVCIATEKHTGKQVAVKKMDLR 81
Query: 511 SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSS 569
R +V ++ H N+V + Y DE ++ +F+ G+L + + +M
Sbjct: 82 KQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNE- 140
Query: 570 PCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGD 629
E + V R L++LH + +H ++K ++LL +D K+ DFG V+ +
Sbjct: 141 ------EQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE 194
Query: 630 TSSSK 634
K
Sbjct: 195 VPKRK 199
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 51/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T+ G A +
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYVATRW-- 194
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 195 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 221
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 222 ELLTGRTL 229
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 51/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T+ G A +
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYVATRW-- 194
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 195 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 221
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 222 ELLTGRTL 229
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 51/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T+ G A +
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTADEMTGYVATRW-- 194
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 195 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 221
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 222 ELLTGRTL 229
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 99/237 (41%), Gaps = 31/237 (13%)
Query: 483 LGASGSSIMYKAV-LEDGTALAVRRIG---ENSVDRFRDFETQVRVIAKLV-HPNLVRIR 537
LG I++K++ G +AV++I +NS D R F ++ ++ +L H N+V +
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHENIVNLL 75
Query: 538 GFYWGVDEK--LIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK 595
+++ +++D++ A R + P H + + + + + +LH
Sbjct: 76 NVLRADNDRDVYLVFDYMETDLHAVIRANIL--EPVHKQY-----VVYQLIKVIKYLHSG 128
Query: 596 KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQ 655
+H ++KP N+LL + K+ DFGL R + + N ++ +
Sbjct: 129 GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILT 188
Query: 656 DLXXXXXXXXXXXXXXXXXXXXYHAPESLR-SIKPNPKWDVYSFGVILLELLTGKVI 711
D Y APE L S K D++S G IL E+L GK I
Sbjct: 189 DY---------------VATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPI 230
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 53/243 (21%)
Query: 484 GASGSSIMYKAVLEDG------TALAVRRIGENSVDR-FRDFETQVRVIAKL-VHPNLVR 535
GA G ++ +A+ D T +AV+ + ++ ++ D +++ ++ + H N++
Sbjct: 24 GAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIIN 83
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLA---NARY---RKMGSSPCHLPWEAR-----LKIAKG 584
+ G +I ++ G+L AR + +P H P E + A
Sbjct: 84 LLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQ 143
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
VARG+ +L KK +H +L RNVL+ D KI DFGL R +
Sbjct: 144 VARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY------------Y 191
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
K++T R + + APE+L + DV+SFGV+L E
Sbjct: 192 KKTTNGRLPVK----------------------WMAPEALFDRIYTHQSDVWSFGVLLWE 229
Query: 705 LLT 707
+ T
Sbjct: 230 IFT 232
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Query: 482 ILGASGSSIMYKA-VLEDGTALAVRRIGENSVDR---FRDFETQVRVIAKLVHPNLVRIR 537
+LG + +Y+A + G +A++ I + ++ + + + +V++ +L HP+++ +
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 538 GFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKH 597
++ + ++ + NG + RY K P EAR + G+ +LH
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMN--RYLKNRVKPFS-ENEAR-HFMHQIITGMLYLHSHGI 133
Query: 598 VHGNLKPRNVLLGNDMEPKIGDFGL 622
+H +L N+LL +M KI DFGL
Sbjct: 134 LHRDLTLSNLLLTRNMNIKIADFGL 158
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWE 576
D E +V ++ ++ HPN++ + Y + ++I + V G L + K L E
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES-----LTEE 114
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP----KIGDFGL 622
+ K + G+ +LH + H +LKP N++L + P KI DFGL
Sbjct: 115 EATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 18/125 (14%)
Query: 516 RDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL-----ANARYRKMGSSP 570
+ E + R+ L HPN+VR+ +I+D V G L A Y + +S
Sbjct: 55 QKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASH 114
Query: 571 CHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDME---PKIGDFGLERLVT 627
C + + + H+ VH NLKP N+LL + ++ K+ DFGL V
Sbjct: 115 C----------IQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE 164
Query: 628 GDTSS 632
G+ +
Sbjct: 165 GEQQA 169
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 11/162 (6%)
Query: 482 ILGASGSSIMYKAV-LEDG----TALAVRRIGENSVDRF-RDFETQVRVIAKLVHPNLVR 535
+LG+ +YK + + DG +A++ + EN+ + ++ + V+A + P + R
Sbjct: 24 VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSR 83
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK 595
+ G +L+ +P G L + G L + L +A+G+++L +
Sbjct: 84 LLGICLTSTVQLVT-QLMPYGCLLDHVRENRG----RLGSQDLLNWCMQIAKGMSYLEDV 138
Query: 596 KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637
+ VH +L RNVL+ + KI DFGL RL+ D + A G
Sbjct: 139 RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADG 180
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 16/168 (9%)
Query: 468 KELELETLLKASAYILGASGSSIMYKAV-LEDGTALAVR---RIGENSVDR--FRDFETQ 521
KE EL L +LG+ ++K V + +G ++ + ++ E+ R F+
Sbjct: 11 KETELRKL-----KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDH 65
Query: 522 VRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKI 581
+ I L H ++VR+ G G +L+ ++P GSL + + G+ L L
Sbjct: 66 MLAIGSLDHAHIVRLLGLCPGSSLQLVT-QYLPLGSLLDHVRQHRGALGPQL----LLNW 120
Query: 582 AKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGD 629
+A+G+ +L E VH NL RNVLL + + ++ DFG+ L+ D
Sbjct: 121 GVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGXVATRW-- 187
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 188 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 215 ELLTGRTL 222
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 187
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 188 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 215 ELLTGRTL 222
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRW-- 192
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 193 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 219
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 220 ELLTGRTL 227
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 187
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 188 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 215 ELLTGRTL 222
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRW-- 192
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 193 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 219
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 220 ELLTGRTL 227
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 187
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 188 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 215 ELLTGRTL 222
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 187
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 188 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 215 ELLTGRTL 222
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 193
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 194 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 220
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 221 ELLTGRTL 228
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 194
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 195 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 221
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 222 ELLTGRTL 229
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 192
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 193 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 219
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 220 ELLTGRTL 227
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 189
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 190 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 216
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 217 ELLTGRTL 224
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 133 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 186
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 187 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 213
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 214 ELLTGRTL 221
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRW-- 187
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 188 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 215 ELLTGRTL 222
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 187
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 188 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 215 ELLTGRTL 222
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 199
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 200 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 226
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 227 ELLTGRTL 234
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 192
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 193 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 219
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 220 ELLTGRTL 227
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 76/196 (38%), Gaps = 50/196 (25%)
Query: 520 TQVRVIAKLVHPNLVRIRGFYWGVDEK-----LIIYDFVPNGSLANARYRKMGSSPCHLP 574
++V ++ +L HPN+VR +Y + ++ I+ ++ G LA+ K +L
Sbjct: 54 SEVNLLRELKHPNIVR---YYDRIIDRTNTTLYIVMEYCEGGDLASV-ITKGTKERQYLD 109
Query: 575 WEARLKIAKGVARGLAFLHEKKH-----VHGNLKPRNVLLGNDMEPKIGDFGLERLVTGD 629
E L++ + L H + +H +LKP NV L K+GDFGL R++ D
Sbjct: 110 EEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD 169
Query: 630 TSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKP 689
+K Y +PE + +
Sbjct: 170 EDFAKE------------------------------------FVGTPYYMSPEQMNRMSY 193
Query: 690 NPKWDVYSFGVILLEL 705
N K D++S G +L EL
Sbjct: 194 NEKSDIWSLGCLLYEL 209
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 199
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 200 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 226
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 227 ELLTGRTL 234
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 189
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 190 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 216
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 217 ELLTGRTL 224
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 189
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 190 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 216
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 217 ELLTGRTL 224
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 199
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 200 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 226
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 227 ELLTGRTL 234
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 187
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 188 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 215 ELLTGRTL 222
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 187
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 188 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 215 ELLTGRTL 222
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 145 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR----HTDDEMTGYVATRW-- 198
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 199 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 225
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 226 ELLTGRTL 233
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 187
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 188 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 215 ELLTGRTL 222
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 184
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 185 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 211
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 212 ELLTGRTL 219
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 187
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 188 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 215 ELLTGRTL 222
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 157 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMXGYVATRW-- 210
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 211 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 237
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 238 ELLTGRTL 245
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 144 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 197
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 198 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 224
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 225 ELLTGRTL 232
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 145 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 198
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 199 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 225
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 226 ELLTGRTL 233
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 132 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 185
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 186 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 212
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 213 ELLTGRTL 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 207
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 208 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 234
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 235 ELLTGRTL 242
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 157 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 210
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 211 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 237
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 238 ELLTGRTL 245
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMXGXVATRW-- 207
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 208 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 234
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 235 ELLTGRTL 242
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 183
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 184 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 210
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 211 ELLTGRTL 218
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 184
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 185 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 211
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 212 ELLTGRTL 219
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 153 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 206
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 207 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 233
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 234 ELLTGRTL 241
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 183
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 184 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 210
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 211 ELLTGRTL 218
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 193
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 194 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 220
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 221 ELLTGRTL 228
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 76/191 (39%), Gaps = 42/191 (21%)
Query: 519 ETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEAR 578
+ ++ V+++ P + + G Y + II +++ GS + P L
Sbjct: 73 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL------EPGPLDETQI 126
Query: 579 LKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638
I + + +GL +LH +K +H ++K NVLL E K+ DFG+ G
Sbjct: 127 ATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGV-------------AGQ 173
Query: 639 ARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSF 698
+ KR+T F + APE ++ + K D++S
Sbjct: 174 LTDTQIKRNTFVGTPF-----------------------WMAPEVIKQSAYDSKADIWSL 210
Query: 699 GVILLELLTGK 709
G+ +EL G+
Sbjct: 211 GITAIELARGE 221
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 183
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 184 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 210
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 211 ELLTGRTL 218
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 207
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 208 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 234
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 235 ELLTGRTL 242
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 153 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 206
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 207 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 233
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 234 ELLTGRTL 241
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 55/142 (38%), Gaps = 42/142 (29%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 163 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 216
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 217 ---------------------------------YRAPEIMLNWMHYNMTVDIWSVGCIMA 243
Query: 704 ELLTGKVIV--VDELGQGNGLL 723
ELLTG+ + D + Q ++
Sbjct: 244 ELLTGRTLFPGTDHINQLQQIM 265
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 9/156 (5%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGV 543
GA + K L G A++ I ++ R E ++ V+ K+ H N+V + Y
Sbjct: 20 GAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYEST 78
Query: 544 DEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLK 603
++ V G L + ++ + +A L I + V + +LHE VH +LK
Sbjct: 79 THYYLVMQLVSGGEL----FDRILERGVYTEKDASLVIQQ-VLSAVKYLHENGIVHRDLK 133
Query: 604 PRNVLLGNDMEPK---IGDFGLERLVTGDTSSSKAG 636
P N+L E I DFGL ++ S+ G
Sbjct: 134 PENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACG 169
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR----HTDDEMTGYVATRW-- 193
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 194 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 220
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 221 ELLTGRTL 228
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR----HTDDEMTGYVATRW-- 189
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 190 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 216
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 217 ELLTGRTL 224
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----HTDDEMTGYVATRW-- 193
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 194 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 220
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 221 ELLTGRTL 228
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 103/248 (41%), Gaps = 61/248 (24%)
Query: 483 LGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRI----- 536
LG G+ +++ AV D +A+++I + ++++I +L H N+V++
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 537 ---------RGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVAR 587
G ++ I+ +++ LAN + P L ARL + + + R
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMET-DLANV----LEQGPL-LEEHARLFMYQ-LLR 131
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGN-DMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKR 646
GL ++H +H +LKP N+ + D+ KIGDFGL R++ D S G + +K
Sbjct: 132 GLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIM--DPHYSHKGHLSEGLVTK- 188
Query: 647 STASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPN---PKWDVYSFGVILL 703
Y +P L S PN D+++ G I
Sbjct: 189 ------------------------------WYRSPRLLLS--PNNYTKAIDMWAAGCIFA 216
Query: 704 ELLTGKVI 711
E+LTGK +
Sbjct: 217 EMLTGKTL 224
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 67/161 (41%), Gaps = 21/161 (13%)
Query: 483 LGASGSSIMYKAV-LEDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGF 539
LG S++ + V + G A + I S + E + R+ L HPN+VR+
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 540 YWGVDEKLIIYDFVPNGSL-----ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+I+D V G L A Y + +S C + + + H+
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHC----------IQQILEAVLHCHQ 139
Query: 595 KKHVHGNLKPRNVLLGNDME---PKIGDFGLERLVTGDTSS 632
VH +LKP N+LL + ++ K+ DFGL V G+ +
Sbjct: 140 MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQA 180
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 84/214 (39%), Gaps = 43/214 (20%)
Query: 499 GTALAVRRIGENSVDRFRD-FETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557
A+A++ + D R+ F + + + HP++V++ G + II + G
Sbjct: 38 AMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGE 96
Query: 558 LAN-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
L + + RK L + + A ++ LA+L K+ VH ++ RNVL+ ++ K
Sbjct: 97 LRSFLQVRKFS-----LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVK 151
Query: 617 IGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXX 676
+GDFGL R + T + G
Sbjct: 152 LGDFGLSRYMEDSTXXKASKGK-----------------------------------LPI 176
Query: 677 XYHAPESLRSIKPNPKWDVYSFGVILLELLTGKV 710
+ APES+ + DV+ FGV + E+L V
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 210
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 10/118 (8%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDE----KLIIYDFVPNGSLANARY-RKMGSSPCHLPW 575
++R++ HPN++ +R + +E KL + + LA + +++ SP H+ +
Sbjct: 79 EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQY 138
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633
+ GL LHE VH +L P N+LL ++ + I DF L R T D + +
Sbjct: 139 -----FMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKT 191
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 44/190 (23%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+++V+ + P +V G ++ E I + + GSL + +K G +P + K
Sbjct: 116 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAG----RIPEQILGK 170
Query: 581 IAKGVARGLAFLHEK-KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639
++ V +GL +L EK K +H ++KP N+L+ + E K+ DFG V+G S A
Sbjct: 171 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSM----A 222
Query: 640 RNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFG 699
+F RS Y +PE L+ + + D++S G
Sbjct: 223 NSFVGTRS------------------------------YMSPERLQGTHYSVQSDIWSMG 252
Query: 700 VILLELLTGK 709
+ L+E+ G+
Sbjct: 253 LSLVEMAVGR 262
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWE 576
+ E +V ++ +++H N++ + Y + ++I + V G L + +K L E
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-----LSEE 115
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP----KIGDFGL 622
K + G+ +LH KK H +LKP N++L + P K+ DFGL
Sbjct: 116 EATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWE 576
+ E +V ++ +++H N++ + Y + ++I + V G L + +K L E
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES-----LSEE 115
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP----KIGDFGL 622
K + G+ +LH KK H +LKP N++L + P K+ DFGL
Sbjct: 116 EATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 44/190 (23%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+++V+ + P +V G ++ E I + + GSL + +K G +P + K
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAG----RIPEQILGK 108
Query: 581 IAKGVARGLAFLHEK-KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639
++ V +GL +L EK K +H ++KP N+L+ + E K+ DFG V+G S A
Sbjct: 109 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSM----A 160
Query: 640 RNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFG 699
+F RS Y +PE L+ + + D++S G
Sbjct: 161 NSFVGTRS------------------------------YMSPERLQGTHYSVQSDIWSMG 190
Query: 700 VILLELLTGK 709
+ L+E+ G+
Sbjct: 191 LSLVEMAVGR 200
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 96/239 (40%), Gaps = 60/239 (25%)
Query: 483 LGASGSSIMYKAVLEDGTALAVR----------RIGENSVDRFRDFETQVRVIAKLVHPN 532
LG G S +Y L + T L ++ R E ++ RF E +V ++L H N
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRF---EREVHNSSQLSHQN 72
Query: 533 LVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFL 592
+V + D ++ +++ +L+ + S L + + + G+
Sbjct: 73 IVSMIDVDEEDDCYYLVMEYIEGPTLS-----EYIESHGPLSVDTAINFTNQILDGIKHA 127
Query: 593 HEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLV--TGDTSSSKAGGSARNFGSKRSTAS 650
H+ + VH ++KP+N+L+ ++ KI DFG+ + + T T ++ G+ +
Sbjct: 128 HDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQ---------- 177
Query: 651 RDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709
Y +PE + + D+YS G++L E+L G+
Sbjct: 178 ---------------------------YFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWE 576
+ E +V ++ +++H N++ + Y + ++I + V G L + +K S E
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE-----E 115
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP----KIGDFGL 622
K + G+ +LH KK H +LKP N++L + P K+ DFGL
Sbjct: 116 EATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 10/118 (8%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDE----KLIIYDFVPNGSLANARY-RKMGSSPCHLPW 575
++R++ HPN++ +R + +E KL + + LA + +++ SP H+ +
Sbjct: 79 EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQY 138
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633
+ GL LHE VH +L P N+LL ++ + I DF L R T D + +
Sbjct: 139 -----FMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKT 191
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 48/202 (23%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+++V+ + P +V G ++ E I + + GSL +K G +P + K
Sbjct: 73 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV-LKKAG----RIPEQILGK 127
Query: 581 IAKGVARGLAFLHEK-KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639
++ V +GL +L EK K +H ++KP N+L+ + E K+ DFG V+G S A
Sbjct: 128 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDS----MA 179
Query: 640 RNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFG 699
+F RS Y +PE L+ + + D++S G
Sbjct: 180 NSFVGTRS------------------------------YMSPERLQGTHYSVQSDIWSMG 209
Query: 700 VILLELLTGKVIVVDELGQGNG 721
+ L+E+ G+ +G G+G
Sbjct: 210 LSLVEMAVGRY----PIGSGSG 227
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 22/162 (13%)
Query: 482 ILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVR---VIAKLVHPNLVRIR 537
ILG ++ +++ + G A++ N++ R + Q+R V+ KL H N+V++
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVF--NNISFLRPVDVQMREFEVLKKLNHKNIVKL- 72
Query: 538 GFYWGVDE------KLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAF 591
+ ++E K++I +F P GSL S+ LP L + + V G+
Sbjct: 73 ---FAIEEETTTRHKVLIMEFCPCGSLYTVLEEP--SNAYGLPESEFLIVLRDVVGGMNH 127
Query: 592 LHEKKHVHGNLKPRNVL--LGNDMEP--KIGDFGLERLVTGD 629
L E VH N+KP N++ +G D + K+ DFG R + D
Sbjct: 128 LRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 83/190 (43%), Gaps = 44/190 (23%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+++V+ + P +V G ++ E I + + GSL +K G +P + K
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV-LKKAG----RIPEQILGK 108
Query: 581 IAKGVARGLAFLHEK-KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639
++ V +GL +L EK K +H ++KP N+L+ + E K+ DFG V+G S A
Sbjct: 109 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSM----A 160
Query: 640 RNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFG 699
+F RS Y +PE L+ + + D++S G
Sbjct: 161 NSFVGTRS------------------------------YMSPERLQGTHYSVQSDIWSMG 190
Query: 700 VILLELLTGK 709
+ L+E+ G+
Sbjct: 191 LSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 83/190 (43%), Gaps = 44/190 (23%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+++V+ + P +V G ++ E I + + GSL +K G +P + K
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV-LKKAG----RIPEQILGK 108
Query: 581 IAKGVARGLAFLHEK-KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639
++ V +GL +L EK K +H ++KP N+L+ + E K+ DFG V+G S A
Sbjct: 109 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSM----A 160
Query: 640 RNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFG 699
+F RS Y +PE L+ + + D++S G
Sbjct: 161 NSFVGTRS------------------------------YMSPERLQGTHYSVQSDIWSMG 190
Query: 700 VILLELLTGK 709
+ L+E+ G+
Sbjct: 191 LSLVEMAVGR 200
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 33/167 (19%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRD---FETQVRVIAKLVHPNLVRIR-- 537
LG S++ + V + T +I RD E + R+ L HPN+VR+
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 98
Query: 538 ----GFYWGVDEKLIIYDFVPNGSL-----ANARYRKMGSSPCHLPWEARLKIAKGVARG 588
GF++ +++D V G L A Y + +S C +
Sbjct: 99 ISEEGFHY------LVFDLVTGGELFEDIVAREYYSEADASHC----------IHQILES 142
Query: 589 LAFLHEKKHVHGNLKPRNVLLGNDME---PKIGDFGLERLVTGDTSS 632
+ +H+ VH +LKP N+LL + + K+ DFGL V G+ +
Sbjct: 143 VNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQA 189
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 22/162 (13%)
Query: 482 ILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVR---VIAKLVHPNLVRIR 537
ILG ++ +++ + G A++ N++ R + Q+R V+ KL H N+V++
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVF--NNISFLRPVDVQMREFEVLKKLNHKNIVKL- 72
Query: 538 GFYWGVDE------KLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAF 591
+ ++E K++I +F P GSL + S+ LP L + + V G+
Sbjct: 73 ---FAIEEETTTRHKVLIMEFCPCGSLYTVL--EEPSNAYGLPESEFLIVLRDVVGGMNH 127
Query: 592 LHEKKHVHGNLKPRNVL--LGNDMEP--KIGDFGLERLVTGD 629
L E VH N+KP N++ +G D + K+ DFG R + D
Sbjct: 128 LRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 68/163 (41%), Gaps = 36/163 (22%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRI----GENSVDRFRDFETQV-RVIAKLVHPNLVRIRG 538
GA G + + G +A++R+ GE + E V R + HPN+VR+
Sbjct: 22 GAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFD 81
Query: 539 F---------------YWGVDEKLIIY-DFVPNGSLANARYRKMGSSPCHLPWEARLKIA 582
+ VD+ L Y D VP + P E +
Sbjct: 82 VCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGV---------------PTETIKDMM 126
Query: 583 KGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERL 625
+ RGL FLH + VH +LKP+N+L+ + + K+ DFGL R+
Sbjct: 127 FQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI 169
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 95/242 (39%), Gaps = 52/242 (21%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW-- 541
GA G + + L D A+++I ++ ++ ++V ++A L H +VR +
Sbjct: 17 GAFGQVVKARNAL-DSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLER 74
Query: 542 --------GVDEK---LIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLA 590
V +K I ++ NG+L Y + S + + ++ + + L+
Sbjct: 75 RNFVKPMTAVKKKSTLFIQMEYCENGTL----YDLIHSENLNQQRDEYWRLFRQILEALS 130
Query: 591 FLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER-----LVTGDTSSSKAGGSARNFGSK 645
++H + +H +LKP N+ + KIGDFGL + L S GS+ N S
Sbjct: 131 YIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSA 190
Query: 646 RSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSI-KPNPKWDVYSFGVILLE 704
TA Y A E L N K D+YS G+I E
Sbjct: 191 IGTA---------------------------MYVATEVLDGTGHYNEKIDMYSLGIIFFE 223
Query: 705 LL 706
++
Sbjct: 224 MI 225
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWE 576
+ E +V ++ +++H N++ + Y + ++I + V G L + +K S E
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE-----E 115
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP----KIGDFGL 622
K + G+ +LH KK H +LKP N++L + P K+ DFGL
Sbjct: 116 EATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 97/241 (40%), Gaps = 56/241 (23%)
Query: 482 ILGASGSSIMYKAV-LEDGTALAVRRIGENSVDRFRD------FETQVRVIAKLVHPNLV 534
ILG G S ++ A L D +AV+ + D RD F + + A L HP +V
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVL---RADLARDPSFYLRFRREAQNAAALNHPAIV 75
Query: 535 RIRGFYWGVDEK------LIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARG 588
+ + G E I+ ++V +L + + + +P + +++ +
Sbjct: 76 AV--YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP-----KRAIEVIADACQA 128
Query: 589 LAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRST 648
L F H+ +H ++KP N+L+ K+ DFG+ R + + +G S + T
Sbjct: 129 LNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAI------ADSGNSVXQTAAVIGT 182
Query: 649 ASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTG 708
A Y +PE R + + DVYS G +L E+LTG
Sbjct: 183 AQ---------------------------YLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
Query: 709 K 709
+
Sbjct: 216 E 216
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWE 576
+ E +V ++ +++H N++ + Y + ++I + V G L + +K S E
Sbjct: 61 EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE-----E 115
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP----KIGDFGL 622
K + G+ +LH KK H +LKP N++L + P K+ DFGL
Sbjct: 116 EATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 44/190 (23%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+++V+ + P +V G ++ E I + + GSL + +K G +P + K
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAG----RIPEQILGK 108
Query: 581 IAKGVARGLAFLHEK-KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639
++ V +GL +L EK K +H ++KP N+L+ + E K+ DFG V+G S A
Sbjct: 109 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSM----A 160
Query: 640 RNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFG 699
+F RS Y +PE L+ + + D++S G
Sbjct: 161 NSFVGTRS------------------------------YMSPERLQGTHYSVQSDIWSMG 190
Query: 700 VILLELLTGK 709
+ L+E+ G+
Sbjct: 191 LSLVEMAVGR 200
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 89/235 (37%), Gaps = 53/235 (22%)
Query: 483 LGASGSSIMYKAVLEDGT-ALAVRRIGENSVDRFRDFETQVRVIA-KLV--HPNLVRIRG 538
LG SI K V + A AV+ I + + TQ + A KL HPN+V++
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIVKLHE 73
Query: 539 FYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
+ ++ + + G L +K S + I + + ++ +H+ V
Sbjct: 74 VFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASY-----IMRKLVSAVSHMHDVGVV 128
Query: 599 HGNLKPRNVLLGND---MEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQ 655
H +LKP N+L ++ +E KI DFG RL D K +
Sbjct: 129 HRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLH-------------- 174
Query: 656 DLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTGKV 710
Y APE L + D++S GVIL +L+G+V
Sbjct: 175 ----------------------YAAPELLNQNGYDESCDLWSLGVILYTMLSGQV 207
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI D+GL R T G A +
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLAR----HTDDEMTGYVATRW-- 187
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 188 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 215 ELLTGRTL 222
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 53/129 (41%), Gaps = 38/129 (29%)
Query: 582 AKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGL-ERLVTGDTSSSKAGGSAR 640
A + GL FLH K V+ +LK N+LL D KI DFG+ + + GD +++ G+
Sbjct: 125 AAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTP- 183
Query: 641 NFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGV 700
Y APE L K N D +SFGV
Sbjct: 184 ------------------------------------DYIAPEILLGQKYNHSVDWWSFGV 207
Query: 701 ILLELLTGK 709
+L E+L G+
Sbjct: 208 LLYEMLIGQ 216
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 83/190 (43%), Gaps = 44/190 (23%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+++V+ + P +V G ++ E I + + GSL +K G +P + K
Sbjct: 81 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV-LKKAG----RIPEQILGK 135
Query: 581 IAKGVARGLAFLHEK-KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639
++ V +GL +L EK K +H ++KP N+L+ + E K+ DFG V+G S A
Sbjct: 136 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDS----MA 187
Query: 640 RNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFG 699
+F RS Y +PE L+ + + D++S G
Sbjct: 188 NSFVGTRS------------------------------YMSPERLQGTHYSVQSDIWSMG 217
Query: 700 VILLELLTGK 709
+ L+E+ G+
Sbjct: 218 LSLVEMAVGR 227
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 76/191 (39%), Gaps = 42/191 (21%)
Query: 519 ETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEAR 578
+ ++ V+++ P + + G Y + II +++ GS + P L
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL------EPGPLDETQI 106
Query: 579 LKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638
I + + +GL +LH +K +H ++K NVLL E K+ DFG+ G
Sbjct: 107 ATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGV-------------AGQ 153
Query: 639 ARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSF 698
+ KR+T F + APE ++ + K D++S
Sbjct: 154 LTDTQIKRNTFVGTPF-----------------------WMAPEVIKQSAYDSKADIWSL 190
Query: 699 GVILLELLTGK 709
G+ +EL G+
Sbjct: 191 GITAIELARGE 201
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 88/218 (40%), Gaps = 55/218 (25%)
Query: 499 GTALAVRRIGENSVDR--FRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556
G +AV+ I + ++ + +VR+ L HPN+V++ ++ ++ G
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGG 98
Query: 557 SL-----ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN 611
+ A+ R ++ EAR K + + + + H+K VH +LK N+LL
Sbjct: 99 EVFDYLVAHGRXKEK---------EARAKF-RQIVSAVQYCHQKFIVHRDLKAENLLLDA 148
Query: 612 DMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXX 671
D KI DFG T FG+K D+F
Sbjct: 149 DXNIKIADFGFSNEFT--------------FGNK-----LDAF----------------- 172
Query: 672 XXXXXXYHAPESLRSIKPN-PKWDVYSFGVILLELLTG 708
Y APE + K + P+ DV+S GVIL L++G
Sbjct: 173 -CGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 73/148 (49%), Gaps = 10/148 (6%)
Query: 482 ILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHP-NLVRIRGFY 540
++G +YK LA ++ + + D + + ++ ++ K H N+ G +
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAF 90
Query: 541 W-----GVDEKL-IIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
G+D++L ++ +F GS+ + G++ L E I + + RGL+ LH+
Sbjct: 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNT---LKEEWIAYICREILRGLSHLHQ 147
Query: 595 KKHVHGNLKPRNVLLGNDMEPKIGDFGL 622
K +H ++K +NVLL + E K+ DFG+
Sbjct: 148 HKVIHRDIKGQNVLLTENAEVKLVDFGV 175
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DFGL R T G A +
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCR----HTDDEMTGYVATRW-- 187
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 188 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 215 ELLTGRTL 222
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 97/241 (40%), Gaps = 56/241 (23%)
Query: 482 ILGASGSSIMYKAV-LEDGTALAVRRIGENSVDRFRD------FETQVRVIAKLVHPNLV 534
ILG G S ++ A L D +AV+ + D RD F + + A L HP +V
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVL---RADLARDPSFYLRFRREAQNAAALNHPAIV 75
Query: 535 RIRGFYWGVDEK------LIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARG 588
+ + G E I+ ++V +L + + + +P + +++ +
Sbjct: 76 AV--YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP-----KRAIEVIADACQA 128
Query: 589 LAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRST 648
L F H+ +H ++KP N+++ K+ DFG+ R + + +G S + T
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI------ADSGNSVTQTAAVIGT 182
Query: 649 ASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTG 708
A Y +PE R + + DVYS G +L E+LTG
Sbjct: 183 AQ---------------------------YLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
Query: 709 K 709
+
Sbjct: 216 E 216
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 34/123 (27%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
VARG+ FL +K +H +L RN+LL + KI DFGL R + + + G +
Sbjct: 208 VARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDT------ 261
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
+ APES+ + K DV+S+GV+L E
Sbjct: 262 ----------------------------RLPLKWMAPESIFDKIYSTKSDVWSYGVLLWE 293
Query: 705 LLT 707
+ +
Sbjct: 294 IFS 296
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 97/241 (40%), Gaps = 56/241 (23%)
Query: 482 ILGASGSSIMYKAV-LEDGTALAVRRIGENSVDRFRD------FETQVRVIAKLVHPNLV 534
ILG G S ++ A L D +AV+ + D RD F + + A L HP +V
Sbjct: 19 ILGFGGMSEVHLARDLRDHRDVAVKVL---RADLARDPSFYLRFRREAQNAAALNHPAIV 75
Query: 535 RIRGFYWGVDEK------LIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARG 588
+ + G E I+ ++V +L + + + +P + +++ +
Sbjct: 76 AV--YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP-----KRAIEVIADACQA 128
Query: 589 LAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRST 648
L F H+ +H ++KP N+++ K+ DFG+ R + + +G S + T
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI------ADSGNSVTQTAAVIGT 182
Query: 649 ASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTG 708
A Y +PE R + + DVYS G +L E+LTG
Sbjct: 183 AQ---------------------------YLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
Query: 709 K 709
+
Sbjct: 216 E 216
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 47/128 (36%), Gaps = 24/128 (18%)
Query: 579 LKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638
L I +A + FLH K +H +LKP N+ D K+GDFGL + D
Sbjct: 167 LHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 226
Query: 639 ARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSF 698
+ + Y +PE + + K D++S
Sbjct: 227 MPAYATHXGQVG------------------------TKLYMSPEQIHGNNYSHKVDIFSL 262
Query: 699 GVILLELL 706
G+IL ELL
Sbjct: 263 GLILFELL 270
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 573 LPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERL 625
+P E + + RGL FLH + VH +LKP+N+L+ + + K+ DFGL R+
Sbjct: 117 VPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI 169
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 83/190 (43%), Gaps = 44/190 (23%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+++V+ + P +V G ++ E I + + GSL +K G +P + K
Sbjct: 54 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV-LKKAG----RIPEQILGK 108
Query: 581 IAKGVARGLAFLHEK-KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639
++ V +GL +L EK K +H ++KP N+L+ + E K+ DFG V+G S A
Sbjct: 109 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSM----A 160
Query: 640 RNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFG 699
+F RS Y +PE L+ + + D++S G
Sbjct: 161 NSFVGTRS------------------------------YMSPERLQGTHYSVQSDIWSMG 190
Query: 700 VILLELLTGK 709
+ L+E+ G+
Sbjct: 191 LSLVEMAVGR 200
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 573 LPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERL 625
+P E + + RGL FLH + VH +LKP+N+L+ + + K+ DFGL R+
Sbjct: 117 VPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI 169
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 52/129 (40%), Gaps = 38/129 (29%)
Query: 582 AKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGL-ERLVTGDTSSSKAGGSAR 640
A + GL FLH K V+ +LK N+LL D KI DFG+ + + GD ++ G+
Sbjct: 124 AAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTP- 182
Query: 641 NFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGV 700
Y APE L K N D +SFGV
Sbjct: 183 ------------------------------------DYIAPEILLGQKYNHSVDWWSFGV 206
Query: 701 ILLELLTGK 709
+L E+L G+
Sbjct: 207 LLYEMLIGQ 215
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 88/226 (38%), Gaps = 56/226 (24%)
Query: 499 GTALAVR---RIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555
G +AV+ R S+D + +++ + HP+++++ + ++ ++V
Sbjct: 36 GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95
Query: 556 GSL-----ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLG 610
G L + R +M EAR ++ + + + + H VH +LKP NVLL
Sbjct: 96 GELFDYICKHGRVEEM---------EAR-RLFQQILSAVDYCHRHMVVHRDLKPENVLLD 145
Query: 611 NDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXX 670
M KI DFGL +++ + GS
Sbjct: 146 AHMNAKIADFGLSNMMSDGEFLRDSCGSPN------------------------------ 175
Query: 671 XXXXXXXYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVIVVDE 715
Y APE + + P+ D++S GVIL LL G + DE
Sbjct: 176 -------YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE 214
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 88/226 (38%), Gaps = 56/226 (24%)
Query: 499 GTALAVR---RIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555
G +AV+ R S+D + +++ + HP+++++ + ++ ++V
Sbjct: 36 GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95
Query: 556 GSL-----ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLG 610
G L + R +M EAR ++ + + + + H VH +LKP NVLL
Sbjct: 96 GELFDYICKHGRVEEM---------EAR-RLFQQILSAVDYCHRHMVVHRDLKPENVLLD 145
Query: 611 NDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXX 670
M KI DFGL +++ + GS
Sbjct: 146 AHMNAKIADFGLSNMMSDGEFLRTSCGSPN------------------------------ 175
Query: 671 XXXXXXXYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVIVVDE 715
Y APE + + P+ D++S GVIL LL G + DE
Sbjct: 176 -------YAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE 214
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/151 (20%), Positives = 68/151 (45%), Gaps = 4/151 (2%)
Query: 488 SSIMYKAVLEDGTALAVRRIGENSVDRFR---DFETQVRVIAKLVHPNLVRIRGFYWGVD 544
S + A L DG +A++++ + + D ++ ++ +L HPN+++ + +
Sbjct: 46 SEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN 105
Query: 545 EKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKP 604
E I+ + G L+ + +P K + L +H ++ +H ++KP
Sbjct: 106 ELNIVLELADAGDLSRM-IKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKP 164
Query: 605 RNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635
NV + K+GD GL R + T+++ +
Sbjct: 165 ANVFITATGVVKLGDLGLGRFFSSKTTAAHS 195
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 62/128 (48%), Gaps = 6/128 (4%)
Query: 499 GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558
G LA + I + + + ++ V+ +L H NL+++ + ++ +++ ++V G L
Sbjct: 114 GLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173
Query: 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGND--MEPK 616
+ ++ +L + K + G+ +H+ +H +LKP N+L N + K
Sbjct: 174 ----FDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIK 229
Query: 617 IGDFGLER 624
I DFGL R
Sbjct: 230 IIDFGLAR 237
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 79/198 (39%), Gaps = 46/198 (23%)
Query: 518 FETQVRVIAKLVHPNLVRIRGFYWGVDEK------LIIYDFVPNGSLANARYRKMGSSPC 571
F + + A L HP +V + + G E I+ ++V +L + + + +P
Sbjct: 59 FRREAQNAAALNHPAIVAV--YATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP- 115
Query: 572 HLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTS 631
+ +++ + L F H+ +H ++KP N+++ K+ DFG+ R +
Sbjct: 116 ----KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI----- 166
Query: 632 SSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNP 691
+ +G S + TA Y +PE R +
Sbjct: 167 -ADSGNSVTQTAAVIGTAQ---------------------------YLSPEQARGDSVDA 198
Query: 692 KWDVYSFGVILLELLTGK 709
+ DVYS G +L E+LTG+
Sbjct: 199 RSDVYSLGCVLYEVLTGE 216
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 7/109 (6%)
Query: 530 HPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGL 589
HP LV + + D+ + D++ G L + + C L AR A+ +A L
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGEL----FYHLQRERCFLEPRARFYAAE-IASAL 152
Query: 590 AFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGL--ERLVTGDTSSSKAG 636
+LH V+ +LKP N+LL + + DFGL E + T+S+ G
Sbjct: 153 GYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCG 201
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 83/209 (39%), Gaps = 41/209 (19%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+++++ + H N++ I + + ++ + Y+ + + HL +
Sbjct: 79 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ--HLSNDHICY 136
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSAR 640
+ RGL ++H +H +LKP N+LL + KI DFGL R+ D + G
Sbjct: 137 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT---GFLT 193
Query: 641 NFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPK-WDVYSFG 699
+ + R Y APE + + K K D++S G
Sbjct: 194 EYVATR------------------------------WYRAPEIMLNSKGYTKSIDIWSVG 223
Query: 700 VILLELLTGKVIV-----VDELGQGNGLL 723
IL E+L+ + I +D+L G+L
Sbjct: 224 CILAEMLSNRPIFPGKHYLDQLNHILGIL 252
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 83/209 (39%), Gaps = 41/209 (19%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+++++ + H N++ I + + ++ + Y+ + + HL +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ--HLSNDHICY 128
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSAR 640
+ RGL ++H +H +LKP N+LL + KI DFGL R+ D + G
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT---GFLT 185
Query: 641 NFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPK-WDVYSFG 699
+ + R Y APE + + K K D++S G
Sbjct: 186 EYVATR------------------------------WYRAPEIMLNSKGYTKSIDIWSVG 215
Query: 700 VILLELLTGKVIV-----VDELGQGNGLL 723
IL E+L+ + I +D+L G+L
Sbjct: 216 CILAEMLSNRPIFPGKHYLDQLNHILGIL 244
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 587 RGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
RGL ++H + +H +LKP N+L+ + E KIGDFG+ R
Sbjct: 170 RGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMAR 207
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
Query: 482 ILGASGSSIMYKAV-LEDG----TALAVRRIGENSVDRF-RDFETQVRVIAKLVHPNLVR 535
+LG+ +YK + + +G +A++ + E + + ++ + V+A + +P++ R
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ G +LI+ +P G L + R K +L L +A+G+ +L +
Sbjct: 86 LLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLED 139
Query: 595 KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637
++ VH +L RNVL+ KI DFGL +L+ + A G
Sbjct: 140 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 182
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 84/212 (39%), Gaps = 43/212 (20%)
Query: 501 ALAVRRIGENSVDRFRD-FETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLA 559
A+A++ + D R+ F + + + HP++V++ G + II + G L
Sbjct: 68 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELR 126
Query: 560 N-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIG 618
+ + RK L + + A ++ LA+L K+ VH ++ RNVL+ ++ K+G
Sbjct: 127 SFLQVRKYS-----LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLG 181
Query: 619 DFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXY 678
DFGL R + T + G +
Sbjct: 182 DFGLSRYMEDSTYYKASKGK-----------------------------------LPIKW 206
Query: 679 HAPESLRSIKPNPKWDVYSFGVILLELLTGKV 710
APES+ + DV+ FGV + E+L V
Sbjct: 207 MAPESINFRRFTSASDVWMFGVCMWEILMHGV 238
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
Query: 482 ILGASGSSIMYKAV-LEDG----TALAVRRIGENSVDRF-RDFETQVRVIAKLVHPNLVR 535
+LG+ +YK + + +G +A++ + E + + ++ + V+A + +P++ R
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ G +LI+ +P G L + R K +L L +A+G+ +L +
Sbjct: 83 LLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLED 136
Query: 595 KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637
++ VH +L RNVL+ KI DFGL +L+ + A G
Sbjct: 137 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 179
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 84/214 (39%), Gaps = 43/214 (20%)
Query: 499 GTALAVRRIGENSVDRFRD-FETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557
A+A++ + D R+ F + + + HP++V++ G + II + G
Sbjct: 418 AMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGE 476
Query: 558 LAN-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
L + + RK L + + A ++ LA+L K+ VH ++ RNVL+ ++ K
Sbjct: 477 LRSFLQVRKFS-----LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVK 531
Query: 617 IGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXX 676
+GDFGL R + T + G
Sbjct: 532 LGDFGLSRYMEDSTYYKASKGK-----------------------------------LPI 556
Query: 677 XYHAPESLRSIKPNPKWDVYSFGVILLELLTGKV 710
+ APES+ + DV+ FGV + E+L V
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 590
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 83/209 (39%), Gaps = 41/209 (19%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+++++ + H N++ I + + ++ + Y+ + + HL +
Sbjct: 69 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ--HLSNDHICY 126
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSAR 640
+ RGL ++H +H +LKP N+LL + KI DFGL R+ D + G
Sbjct: 127 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT---GFLT 183
Query: 641 NFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPK-WDVYSFG 699
+ + R Y APE + + K K D++S G
Sbjct: 184 EYVATR------------------------------WYRAPEIMLNSKGYTKSIDIWSVG 213
Query: 700 VILLELLTGKVIV-----VDELGQGNGLL 723
IL E+L+ + I +D+L G+L
Sbjct: 214 CILAEMLSNRPIFPGKHYLDQLNHILGIL 242
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 587 RGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
RGL ++H + +H +LKP N+L+ + E KIGDFG+ R
Sbjct: 169 RGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMAR 206
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 83/209 (39%), Gaps = 41/209 (19%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+++++ + H N++ I + + ++ + Y+ + + HL +
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ--HLSNDHICY 133
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSAR 640
+ RGL ++H +H +LKP N+LL + KI DFGL R+ D + G
Sbjct: 134 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT---GFLT 190
Query: 641 NFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPK-WDVYSFG 699
+ + R Y APE + + K K D++S G
Sbjct: 191 EYVATR------------------------------WYRAPEIMLNSKGYTKSIDIWSVG 220
Query: 700 VILLELLTGKVIV-----VDELGQGNGLL 723
IL E+L+ + I +D+L G+L
Sbjct: 221 CILAEMLSNRPIFPGKHYLDQLNHILGIL 249
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 83/209 (39%), Gaps = 41/209 (19%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+++++ + H N++ I + + ++ + Y+ + + HL +
Sbjct: 69 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ--HLSNDHICY 126
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSAR 640
+ RGL ++H +H +LKP N+LL + KI DFGL R+ D + G
Sbjct: 127 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT---GFLT 183
Query: 641 NFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPK-WDVYSFG 699
+ + R Y APE + + K K D++S G
Sbjct: 184 EYVATR------------------------------WYRAPEIMLNSKGYTKSIDIWSVG 213
Query: 700 VILLELLTGKVIV-----VDELGQGNGLL 723
IL E+L+ + I +D+L G+L
Sbjct: 214 CILAEMLSNRPIFPGKHYLDQLNHILGIL 242
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 83/209 (39%), Gaps = 41/209 (19%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+++++ + H N++ I + + ++ + Y+ + + HL +
Sbjct: 77 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ--HLSNDHICY 134
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSAR 640
+ RGL ++H +H +LKP N+LL + KI DFGL R+ D + G
Sbjct: 135 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT---GFLT 191
Query: 641 NFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPK-WDVYSFG 699
+ + R Y APE + + K K D++S G
Sbjct: 192 EYVATR------------------------------WYRAPEIMLNSKGYTKSIDIWSVG 221
Query: 700 VILLELLTGKVIV-----VDELGQGNGLL 723
IL E+L+ + I +D+L G+L
Sbjct: 222 CILAEMLSNRPIFPGKHYLDQLNHILGIL 250
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 83/209 (39%), Gaps = 41/209 (19%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+++++ + H N++ I + + ++ + Y+ + + HL +
Sbjct: 68 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ--HLSNDHICY 125
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSAR 640
+ RGL ++H +H +LKP N+LL + KI DFGL R+ D + G
Sbjct: 126 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT---GFLT 182
Query: 641 NFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPK-WDVYSFG 699
+ + R Y APE + + K K D++S G
Sbjct: 183 EYVATR------------------------------WYRAPEIMLNSKGYTKSIDIWSVG 212
Query: 700 VILLELLTGKVIV-----VDELGQGNGLL 723
IL E+L+ + I +D+L G+L
Sbjct: 213 CILAEMLSNRPIFPGKHYLDQLNHILGIL 241
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 83/209 (39%), Gaps = 41/209 (19%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+++++ + H N++ I + + ++ + Y+ + + HL +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ--HLSNDHICY 132
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSAR 640
+ RGL ++H +H +LKP N+LL + KI DFGL R+ D + G
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT---GFLT 189
Query: 641 NFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPK-WDVYSFG 699
+ + R Y APE + + K K D++S G
Sbjct: 190 EYVATR------------------------------WYRAPEIMLNSKGYTKSIDIWSVG 219
Query: 700 VILLELLTGKVIV-----VDELGQGNGLL 723
IL E+L+ + I +D+L G+L
Sbjct: 220 CILAEMLSNRPIFPGKHYLDQLNHILGIL 248
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWE 576
+ E +V ++ ++ HPN++ + + + ++I + V G L + K L +
Sbjct: 61 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES-----LTED 115
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP----KIGDFGL 622
+ K + G+ +LH K+ H +LKP N++L + P K+ DFG+
Sbjct: 116 EATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 165
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 52/130 (40%), Gaps = 38/130 (29%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRS 647
+ + H K VH +LKP N+LL +++ KI DFGL ++T + GS
Sbjct: 120 AIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPN------- 172
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLR-SIKPNPKWDVYSFGVILLELL 706
Y APE + + P+ DV+S G++L +L
Sbjct: 173 ------------------------------YAAPEVINGKLYAGPEVDVWSCGIVLYVML 202
Query: 707 TGKVIVVDEL 716
G++ DE
Sbjct: 203 VGRLPFDDEF 212
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
Query: 482 ILGASGSSIMYKAV-LEDG----TALAVRRIGENSVDRF-RDFETQVRVIAKLVHPNLVR 535
+LG+ +YK + + +G +A++ + E + + ++ + V+A + +P++ R
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ G +LI+ +P G L + R K +L L +A+G+ +L +
Sbjct: 82 LLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLED 135
Query: 595 KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637
++ VH +L RNVL+ KI DFGL +L+ + A G
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 60/145 (41%), Gaps = 39/145 (26%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+LL + KI DFGL R+ D + G + +
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT---GFLTEYVA 193
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPK-WDVYSFGVILL 703
R Y APE + + K K D++S G IL
Sbjct: 194 TR------------------------------WYRAPEIMLNSKGYTKSIDIWSVGCILA 223
Query: 704 ELLTGKVIV-----VDELGQGNGLL 723
E+L+ + I +D+L G+L
Sbjct: 224 EMLSNRPIFPGKHYLDQLNHILGIL 248
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
Query: 482 ILGASGSSIMYKAV-LEDG----TALAVRRIGENSVDRF-RDFETQVRVIAKLVHPNLVR 535
+LG+ +YK + + +G +A++ + E + + ++ + V+A + +P++ R
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ G +LI+ +P G L + R K +L L +A+G+ +L +
Sbjct: 84 LLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLED 137
Query: 595 KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637
++ VH +L RNVL+ KI DFGL +L+ + A G
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 180
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 83/209 (39%), Gaps = 41/209 (19%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+++++ + H N++ I + + ++ + Y+ + + HL +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ--HLSNDHICY 132
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSAR 640
+ RGL ++H +H +LKP N+LL + KI DFGL R+ D + G
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT---GFLT 189
Query: 641 NFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPK-WDVYSFG 699
+ + R Y APE + + K K D++S G
Sbjct: 190 EYVATR------------------------------WYRAPEIMLNSKGYTKSIDIWSVG 219
Query: 700 VILLELLTGKVIV-----VDELGQGNGLL 723
IL E+L+ + I +D+L G+L
Sbjct: 220 CILAEMLSNRPIFPGKHYLDQLNHILGIL 248
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWE 576
+ E +V ++ ++ HPN++ + + + ++I + V G L + K L +
Sbjct: 75 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES-----LTED 129
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP----KIGDFGL 622
+ K + G+ +LH K+ H +LKP N++L + P K+ DFG+
Sbjct: 130 EATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 179
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 84/214 (39%), Gaps = 43/214 (20%)
Query: 499 GTALAVRRIGENSVDRFRD-FETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557
A+A++ + D R+ F + + + HP++V++ G + II + G
Sbjct: 38 AMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGE 96
Query: 558 LAN-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
L + + RK L + + A ++ LA+L K+ VH ++ RNVL+ ++ K
Sbjct: 97 LRSFLQVRKYS-----LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVK 151
Query: 617 IGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXX 676
+GDFGL R + T + G
Sbjct: 152 LGDFGLSRYMEDSTYYKASKGK-----------------------------------LPI 176
Query: 677 XYHAPESLRSIKPNPKWDVYSFGVILLELLTGKV 710
+ APES+ + DV+ FGV + E+L V
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 210
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
Query: 482 ILGASGSSIMYKAV-LEDG----TALAVRRIGENSVDRF-RDFETQVRVIAKLVHPNLVR 535
+LG+ +YK + + +G +A++ + E + + ++ + V+A + +P++ R
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ G +LI+ +P G L + R K +L L +A+G+ +L +
Sbjct: 85 LLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLED 138
Query: 595 KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637
++ VH +L RNVL+ KI DFGL +L+ + A G
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 60/145 (41%), Gaps = 39/145 (26%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+LL + KI DFGL R+ D + G + +
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT---GFLTEYVA 191
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPK-WDVYSFGVILL 703
R Y APE + + K K D++S G IL
Sbjct: 192 TR------------------------------WYRAPEIMLNSKGYTKSIDIWSVGCILA 221
Query: 704 ELLTGKVIV-----VDELGQGNGLL 723
E+L+ + I +D+L G+L
Sbjct: 222 EMLSNRPIFPGKHYLDQLNHILGIL 246
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 83/209 (39%), Gaps = 41/209 (19%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+++++ + H N++ I + + ++ + Y+ + + HL +
Sbjct: 73 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ--HLSNDHICY 130
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSAR 640
+ RGL ++H +H +LKP N+LL + KI DFGL R+ D + G
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT---GFLT 187
Query: 641 NFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPK-WDVYSFG 699
+ + R Y APE + + K K D++S G
Sbjct: 188 EYVATR------------------------------WYRAPEIMLNSKGYTKSIDIWSVG 217
Query: 700 VILLELLTGKVIV-----VDELGQGNGLL 723
IL E+L+ + I +D+L G+L
Sbjct: 218 CILAEMLSNRPIFPGKHYLDQLNHILGIL 246
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 83/209 (39%), Gaps = 41/209 (19%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+++++ + H N++ I + + ++ + Y+ + + HL +
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ--HLSNDHICY 128
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSAR 640
+ RGL ++H +H +LKP N+LL + KI DFGL R+ D + G
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT---GFLT 185
Query: 641 NFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPK-WDVYSFG 699
+ + R Y APE + + K K D++S G
Sbjct: 186 EYVATR------------------------------WYRAPEIMLNSKGYTKSIDIWSVG 215
Query: 700 VILLELLTGKVIV-----VDELGQGNGLL 723
IL E+L+ + I +D+L G+L
Sbjct: 216 CILAEMLSNRPIFPGKHYLDQLNHILGIL 244
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 84/212 (39%), Gaps = 43/212 (20%)
Query: 501 ALAVRRIGENSVDRFRD-FETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLA 559
A+A++ + D R+ F + + + HP++V++ G + II + G L
Sbjct: 45 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELR 103
Query: 560 N-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIG 618
+ + RK L + + A ++ LA+L K+ VH ++ RNVL+ ++ K+G
Sbjct: 104 SFLQVRKYS-----LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLG 158
Query: 619 DFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXY 678
DFGL R + T + G +
Sbjct: 159 DFGLSRYMEDSTYYKASKGK-----------------------------------LPIKW 183
Query: 679 HAPESLRSIKPNPKWDVYSFGVILLELLTGKV 710
APES+ + DV+ FGV + E+L V
Sbjct: 184 MAPESINFRRFTSASDVWMFGVCMWEILMHGV 215
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 83/209 (39%), Gaps = 41/209 (19%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+++++ + H N++ I + + ++ + Y+ + + HL +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ--HLSNDHICY 132
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSAR 640
+ RGL ++H +H +LKP N+LL + KI DFGL R+ D + G
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT---GFLT 189
Query: 641 NFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPK-WDVYSFG 699
+ + R Y APE + + K K D++S G
Sbjct: 190 EYVATR------------------------------WYRAPEIMLNSKGYTKSIDIWSVG 219
Query: 700 VILLELLTGKVIV-----VDELGQGNGLL 723
IL E+L+ + I +D+L G+L
Sbjct: 220 CILAEMLSNRPIFPGKHYLDQLNHILGIL 248
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWE 576
+ E +V ++ ++ HPN++ + + + ++I + V G L + K L +
Sbjct: 54 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES-----LTED 108
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP----KIGDFGL 622
+ K + G+ +LH K+ H +LKP N++L + P K+ DFG+
Sbjct: 109 EATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 158
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 84/212 (39%), Gaps = 43/212 (20%)
Query: 501 ALAVRRIGENSVDRFRD-FETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLA 559
A+A++ + D R+ F + + + HP++V++ G + II + G L
Sbjct: 42 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELR 100
Query: 560 N-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIG 618
+ + RK L + + A ++ LA+L K+ VH ++ RNVL+ ++ K+G
Sbjct: 101 SFLQVRKYS-----LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLG 155
Query: 619 DFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXY 678
DFGL R + T + G +
Sbjct: 156 DFGLSRYMEDSTYYKASKGK-----------------------------------LPIKW 180
Query: 679 HAPESLRSIKPNPKWDVYSFGVILLELLTGKV 710
APES+ + DV+ FGV + E+L V
Sbjct: 181 MAPESINFRRFTSASDVWMFGVCMWEILMHGV 212
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 60/145 (41%), Gaps = 39/145 (26%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+LL + KI DFGL R+ D + G + +
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT---GFLTEYVA 189
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPK-WDVYSFGVILL 703
R Y APE + + K K D++S G IL
Sbjct: 190 TR------------------------------WYRAPEIMLNSKGYTKSIDIWSVGCILA 219
Query: 704 ELLTGKVIV-----VDELGQGNGLL 723
E+L+ + I +D+L G+L
Sbjct: 220 EMLSNRPIFPGKHYLDQLNHILGIL 244
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 84/212 (39%), Gaps = 43/212 (20%)
Query: 501 ALAVRRIGENSVDRFRD-FETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLA 559
A+A++ + D R+ F + + + HP++V++ G + II + G L
Sbjct: 40 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELR 98
Query: 560 N-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIG 618
+ + RK L + + A ++ LA+L K+ VH ++ RNVL+ ++ K+G
Sbjct: 99 SFLQVRKYS-----LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLG 153
Query: 619 DFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXY 678
DFGL R + T + G +
Sbjct: 154 DFGLSRYMEDSTYYKASKGK-----------------------------------LPIKW 178
Query: 679 HAPESLRSIKPNPKWDVYSFGVILLELLTGKV 710
APES+ + DV+ FGV + E+L V
Sbjct: 179 MAPESINFRRFTSASDVWMFGVCMWEILMHGV 210
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 84/212 (39%), Gaps = 43/212 (20%)
Query: 501 ALAVRRIGENSVDRFRD-FETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLA 559
A+A++ + D R+ F + + + HP++V++ G + II + G L
Sbjct: 43 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELR 101
Query: 560 N-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIG 618
+ + RK L + + A ++ LA+L K+ VH ++ RNVL+ ++ K+G
Sbjct: 102 SFLQVRKYS-----LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLG 156
Query: 619 DFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXY 678
DFGL R + T + G +
Sbjct: 157 DFGLSRYMEDSTYYKASKGK-----------------------------------LPIKW 181
Query: 679 HAPESLRSIKPNPKWDVYSFGVILLELLTGKV 710
APES+ + DV+ FGV + E+L V
Sbjct: 182 MAPESINFRRFTSASDVWMFGVCMWEILMHGV 213
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 84/212 (39%), Gaps = 43/212 (20%)
Query: 501 ALAVRRIGENSVDRFRD-FETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLA 559
A+A++ + D R+ F + + + HP++V++ G + II + G L
Sbjct: 37 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELR 95
Query: 560 N-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIG 618
+ + RK L + + A ++ LA+L K+ VH ++ RNVL+ ++ K+G
Sbjct: 96 SFLQVRKYS-----LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLG 150
Query: 619 DFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXY 678
DFGL R + T + G +
Sbjct: 151 DFGLSRYMEDSTYYKASKGK-----------------------------------LPIKW 175
Query: 679 HAPESLRSIKPNPKWDVYSFGVILLELLTGKV 710
APES+ + DV+ FGV + E+L V
Sbjct: 176 MAPESINFRRFTSASDVWMFGVCMWEILMHGV 207
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 79/198 (39%), Gaps = 46/198 (23%)
Query: 518 FETQVRVIAKLVHPNLVRIRGFYWGVDEK------LIIYDFVPNGSLANARYRKMGSSPC 571
F + + A L HP +V + + G E I+ ++V +L + + + +P
Sbjct: 59 FRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP- 115
Query: 572 HLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTS 631
+ +++ + L F H+ +H ++KP N+++ K+ DFG+ R +
Sbjct: 116 ----KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI----- 166
Query: 632 SSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNP 691
+ +G S + TA Y +PE R +
Sbjct: 167 -ADSGNSVTQTAAVIGTAQ---------------------------YLSPEQARGDSVDA 198
Query: 692 KWDVYSFGVILLELLTGK 709
+ DVYS G +L E+LTG+
Sbjct: 199 RSDVYSLGCVLYEVLTGE 216
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 82/219 (37%), Gaps = 56/219 (25%)
Query: 499 GTALAVR---RIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555
G +AV+ R S+D +++ + HP+++++ + ++ ++V
Sbjct: 41 GHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSG 100
Query: 556 GSL-----ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLG 610
G L N R + S ++ + + G+ + H VH +LKP NVLL
Sbjct: 101 GELFDYICKNGRLDEKESR----------RLFQQILSGVDYCHRHMVVHRDLKPENVLLD 150
Query: 611 NDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXX 670
M KI DFGL +++ + GS
Sbjct: 151 AHMNAKIADFGLSNMMSDGEFLRXSCGSP------------------------------- 179
Query: 671 XXXXXXXYHAPESLR-SIKPNPKWDVYSFGVILLELLTG 708
Y APE + + P+ D++S GVIL LL G
Sbjct: 180 ------NYAAPEVISGRLYAGPEVDIWSSGVILYALLCG 212
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 60/145 (41%), Gaps = 39/145 (26%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+LL + KI DFGL R+ D + G + +
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT---GFLTEYVA 193
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPK-WDVYSFGVILL 703
R Y APE + + K K D++S G IL
Sbjct: 194 TR------------------------------WYRAPEIMLNSKGYTKSIDIWSVGCILA 223
Query: 704 ELLTGKVIV-----VDELGQGNGLL 723
E+L+ + I +D+L G+L
Sbjct: 224 EMLSNRPIFPGKHYLDQLNHILGIL 248
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
Query: 482 ILGASGSSIMYKAV-LEDG----TALAVRRIGENSVDRF-RDFETQVRVIAKLVHPNLVR 535
+LG+ +YK + + +G +A++ + E + + ++ + V+A + +P++ R
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ G +LI+ +P G L + R K +L L +A+G+ +L +
Sbjct: 83 LLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLED 136
Query: 595 KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637
++ VH +L RNVL+ KI DFGL +L+ + A G
Sbjct: 137 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 179
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 9/118 (7%)
Query: 511 SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNGSLANARYRKMGS 568
++D F ++ ++ L HP++V++ G ++E+ II + P G L + R S
Sbjct: 65 TLDNKEKFMSEAVIMKNLDHPHIVKLIGI---IEEEPTWIIMELYPYGELGHYLERNKNS 121
Query: 569 SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLV 626
L + + + + +A+L VH ++ RN+L+ + K+GDFGL R +
Sbjct: 122 ----LKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYI 175
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 60/145 (41%), Gaps = 39/145 (26%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+LL + KI DFGL R+ D + G + +
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT---GFLTEYVA 189
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPK-WDVYSFGVILL 703
R Y APE + + K K D++S G IL
Sbjct: 190 TR------------------------------WYRAPEIMLNSKGYTKSIDIWSVGCILA 219
Query: 704 ELLTGKVIV-----VDELGQGNGLL 723
E+L+ + I +D+L G+L
Sbjct: 220 EMLSNRPIFPGKHYLDQLNHILGIL 244
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 83/209 (39%), Gaps = 41/209 (19%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+++++ + H N++ I + + ++ + Y+ + + HL +
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ--HLSNDHICY 148
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSAR 640
+ RGL ++H +H +LKP N+LL + KI DFGL R+ D + G
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT---GFLT 205
Query: 641 NFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPK-WDVYSFG 699
+ + R Y APE + + K K D++S G
Sbjct: 206 EYVATR------------------------------WYRAPEIMLNSKGYTKSIDIWSVG 235
Query: 700 VILLELLTGKVIV-----VDELGQGNGLL 723
IL E+L+ + I +D+L G+L
Sbjct: 236 CILAEMLSNRPIFPGKHYLDQLNHILGIL 264
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 9/118 (7%)
Query: 511 SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNGSLANARYRKMGS 568
++D F ++ ++ L HP++V++ G ++E+ II + P G L + R S
Sbjct: 53 TLDNKEKFMSEAVIMKNLDHPHIVKLIGI---IEEEPTWIIMELYPYGELGHYLERNKNS 109
Query: 569 SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLV 626
L + + + + +A+L VH ++ RN+L+ + K+GDFGL R +
Sbjct: 110 ----LKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYI 163
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 60/145 (41%), Gaps = 39/145 (26%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+LL + KI DFGL R+ D + G + +
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHT---GFLTEYVA 209
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPK-WDVYSFGVILL 703
R Y APE + + K K D++S G IL
Sbjct: 210 TR------------------------------WYRAPEIMLNSKGYTKSIDIWSVGCILA 239
Query: 704 ELLTGKVIV-----VDELGQGNGLL 723
E+L+ + I +D+L G+L
Sbjct: 240 EMLSNRPIFPGKHYLDQLNHILGIL 264
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 60/145 (41%), Gaps = 39/145 (26%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+LL + KI DFGL R+ D + G + +
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHT---GFLTEYVA 189
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPK-WDVYSFGVILL 703
R Y APE + + K K D++S G IL
Sbjct: 190 TR------------------------------WYRAPEIMLNSKGYTKSIDIWSVGCILA 219
Query: 704 ELLTGKVIV-----VDELGQGNGLL 723
E+L+ + I +D+L G+L
Sbjct: 220 EMLSNRPIFPGKHYLDQLNHILGIL 244
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 9/118 (7%)
Query: 511 SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEK--LIIYDFVPNGSLANARYRKMGS 568
++D F ++ ++ L HP++V++ G ++E+ II + P G L + R S
Sbjct: 49 TLDNKEKFMSEAVIMKNLDHPHIVKLIGI---IEEEPTWIIMELYPYGELGHYLERNKNS 105
Query: 569 SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLV 626
L + + + + +A+L VH ++ RN+L+ + K+GDFGL R +
Sbjct: 106 ----LKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYI 159
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 79/198 (39%), Gaps = 46/198 (23%)
Query: 518 FETQVRVIAKLVHPNLVRIRGFYWGVDEK------LIIYDFVPNGSLANARYRKMGSSPC 571
F + + A L HP +V + + G E I+ ++V +L + + + +P
Sbjct: 76 FRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP- 132
Query: 572 HLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTS 631
+ +++ + L F H+ +H ++KP N+++ K+ DFG+ R +
Sbjct: 133 ----KRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI----- 183
Query: 632 SSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNP 691
+ +G S + TA Y +PE R +
Sbjct: 184 -ADSGNSVTQTAAVIGTAQ---------------------------YLSPEQARGDSVDA 215
Query: 692 KWDVYSFGVILLELLTGK 709
+ DVYS G +L E+LTG+
Sbjct: 216 RSDVYSLGCVLYEVLTGE 233
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 34/123 (27%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
VA+G+ FL +K +H +L RN+LL KI DFGL R + D + G +
Sbjct: 157 VAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA------ 210
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
+ APE++ + DV+SFGV+L E
Sbjct: 211 ----------------------------RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 242
Query: 705 LLT 707
+ +
Sbjct: 243 IFS 245
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 60/145 (41%), Gaps = 39/145 (26%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+LL + KI DFGL R+ D + G + +
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHT---GFLTEYVA 191
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPK-WDVYSFGVILL 703
R Y APE + + K K D++S G IL
Sbjct: 192 TR------------------------------WYRAPEIMLNSKGYTKSIDIWSVGCILA 221
Query: 704 ELLTGKVIV-----VDELGQGNGLL 723
E+L+ + I +D+L G+L
Sbjct: 222 EMLSNRPIFPGKHYLDQLNHILGIL 246
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 27/126 (21%)
Query: 587 RGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKR 646
R + LH +H +LKP N+L+ ++ + K+ DFGL R++ ++++ + + + G
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARII-DESAADNSEPTGQQSGMTE 181
Query: 647 STASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILLEL 705
A+R Y APE L S K + DV+S G IL EL
Sbjct: 182 XVATR-------------------------WYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
Query: 706 LTGKVI 711
+ I
Sbjct: 217 FLRRPI 222
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 34/123 (27%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
VA+G+ FL +K +H +L RN+LL KI DFGL R + D + G +
Sbjct: 157 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA------ 210
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
+ APE++ + DV+SFGV+L E
Sbjct: 211 ----------------------------RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 242
Query: 705 LLT 707
+ +
Sbjct: 243 IFS 245
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 568 SSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERL 625
+ P LP E + + RGL FLH VH +LKP N+L+ + K+ DFGL R+
Sbjct: 112 APPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI 169
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 482 ILGASGSSIMYKAV-LEDG----TALAVRRIGENSVDRF-RDFETQVRVIAKLVHPNLVR 535
+LG+ +YK + + +G +A++ + E + + ++ + V+A + +P++ R
Sbjct: 47 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 106
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ G +LI +P G L + R K +L L +A+G+ +L +
Sbjct: 107 LLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLED 160
Query: 595 KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637
++ VH +L RNVL+ KI DFGL +L+ + A G
Sbjct: 161 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 203
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 34/123 (27%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
VA+G+ FL +K +H +L RN+LL KI DFGL R + D + G +
Sbjct: 148 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA------ 201
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
+ APE++ + DV+SFGV+L E
Sbjct: 202 ----------------------------RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 233
Query: 705 LLT 707
+ +
Sbjct: 234 IFS 236
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 482 ILGASGSSIMYKAV-LEDG----TALAVRRIGENSVDRF-RDFETQVRVIAKLVHPNLVR 535
+LG+ +YK + + +G +A++ + E + + ++ + V+A + +P++ R
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ G +LI +P G L + R K +L L +A+G+ +L +
Sbjct: 82 LLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLED 135
Query: 595 KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637
++ VH +L RNVL+ KI DFGL +L+ + A G
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 482 ILGASGSSIMYKAV-LEDG----TALAVRRIGENSVDRF-RDFETQVRVIAKLVHPNLVR 535
+LG+ +YK + + +G +A++ + E + + ++ + V+A + +P++ R
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ G +LI +P G L + R K +L L +A+G+ +L +
Sbjct: 84 LLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLED 137
Query: 595 KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637
++ VH +L RNVL+ KI DFGL +L+ + A G
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 180
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 34/123 (27%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
VA+G+ FL +K +H +L RN+LL KI DFGL R + D + G +
Sbjct: 148 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA------ 201
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
+ APE++ + DV+SFGV+L E
Sbjct: 202 ----------------------------RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 233
Query: 705 LLT 707
+ +
Sbjct: 234 IFS 236
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 587 RGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
RGLA+ H +K +H +LKP+N+L+ E K+ DFGL R
Sbjct: 111 RGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLAR 148
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 34/123 (27%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
VA+G+ FL +K +H +L RN+LL KI DFGL R + D + G +
Sbjct: 157 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA------ 210
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
+ APE++ + DV+SFGV+L E
Sbjct: 211 ----------------------------RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 242
Query: 705 LLT 707
+ +
Sbjct: 243 IFS 245
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 482 ILGASGSSIMYKAV-LEDG----TALAVRRIGENSVDRF-RDFETQVRVIAKLVHPNLVR 535
+LG+ +YK + + +G +A++ + E + + ++ + V+A + +P++ R
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ G +LI +P G L + R K +L L +A+G+ +L +
Sbjct: 85 LLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLED 138
Query: 595 KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637
++ VH +L RNVL+ KI DFGL +L+ + A G
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 7/123 (5%)
Query: 516 RDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLP 574
++ + V+A + +P++ R+ G +LI+ +P G L + R K +L
Sbjct: 69 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL- 126
Query: 575 WEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634
L +A+G+ +L +++ VH +L RNVL+ KI DFGL +L+ +
Sbjct: 127 ----LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 182
Query: 635 AGG 637
A G
Sbjct: 183 AEG 185
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 49/128 (38%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI DF L R T G A +
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLAR----HTDDEMTGYVATRW-- 187
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 188 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 215 ELLTGRTL 222
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 568 SSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERL 625
+ P LP E + + RGL FLH VH +LKP N+L+ + K+ DFGL R+
Sbjct: 104 APPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 92/238 (38%), Gaps = 52/238 (21%)
Query: 483 LGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRD-FETQVRVIAKLVHPNLVRIRGFY 540
LG G + + + +D G +A+++ + + R+ + +++++ KL HPN+V R
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 541 WGV------DEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
G+ D L+ ++ G L +Y + C L + ++ L +LHE
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLR--KYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 139
Query: 595 KKHVHGNLKPRNVLLG---NDMEPKIGDFGLER-LVTGDTSSSKAGGSARNFGSKRSTAS 650
+ +H +LKP N++L + KI D G + L G+ + G
Sbjct: 140 NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVG-------------- 185
Query: 651 RDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTG 708
Y APE L K D +SFG + E +TG
Sbjct: 186 ------------------------TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 568 SSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERL 625
+ P LP E + + RGL FLH VH +LKP N+L+ + K+ DFGL R+
Sbjct: 104 APPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 27/126 (21%)
Query: 587 RGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKR 646
R + LH +H +LKP N+L+ ++ + K+ DFGL R++ ++++ + + + G
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARII-DESAADNSEPTGQQSGMTE 181
Query: 647 STASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILLEL 705
A+R Y APE L S K + DV+S G IL EL
Sbjct: 182 YVATR-------------------------WYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
Query: 706 LTGKVI 711
+ I
Sbjct: 217 FLRRPI 222
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 482 ILGASGSSIMYKAV-LEDG----TALAVRRIGENSVDRF-RDFETQVRVIAKLVHPNLVR 535
+LG+ +YK + + +G +A++ + E + + ++ + V+A + +P++ R
Sbjct: 32 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 91
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ G +LI +P G L + R K +L L +A+G+ +L +
Sbjct: 92 LLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLED 145
Query: 595 KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637
++ VH +L RNVL+ KI DFGL +L+ + A G
Sbjct: 146 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 188
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 482 ILGASGSSIMYKAV-LEDG----TALAVRRIGENSVDRF-RDFETQVRVIAKLVHPNLVR 535
+LG+ +YK + + +G +A++ + E + + ++ + V+A + +P++ R
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ G +LI +P G L + R K +L L +A+G+ +L +
Sbjct: 85 LLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLED 138
Query: 595 KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637
++ VH +L RNVL+ KI DFGL +L+ + A G
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 92/238 (38%), Gaps = 52/238 (21%)
Query: 483 LGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRD-FETQVRVIAKLVHPNLVRIRGFY 540
LG G + + + +D G +A+++ + + R+ + +++++ KL HPN+V R
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 541 WGV------DEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
G+ D L+ ++ G L +Y + C L + ++ L +LHE
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLR--KYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 140
Query: 595 KKHVHGNLKPRNVLLG---NDMEPKIGDFGLER-LVTGDTSSSKAGGSARNFGSKRSTAS 650
+ +H +LKP N++L + KI D G + L G+ + G
Sbjct: 141 NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVG-------------- 186
Query: 651 RDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTG 708
Y APE L K D +SFG + E +TG
Sbjct: 187 ------------------------TLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 568 SSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERL 625
+ P LP E + + RGL FLH VH +LKP N+L+ + K+ DFGL R+
Sbjct: 104 APPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI 161
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 49/128 (38%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI FGL R T G A +
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLAR----HTDDEMTGYVATRW-- 187
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 188 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 215 ELLTGRTL 222
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 66/146 (45%), Gaps = 25/146 (17%)
Query: 519 ETQVRVIAKLVHPNLVRI-----RGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHL 573
E +V + + H N+++ RG VD LI F GSL++ + S
Sbjct: 66 EYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT-AFHEKGSLSDFLKANVVS----- 119
Query: 574 PWEARLKIAKGVARGLAFLHE---------KKHV-HGNLKPRNVLLGNDMEPKIGDFGLE 623
W IA+ +ARGLA+LHE K + H ++K +NVLL N++ I DFGL
Sbjct: 120 -WNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178
Query: 624 RLVTGDTSSSKAGGSARNFGSKRSTA 649
S AG + G++R A
Sbjct: 179 LKFEAGKS---AGDTHGQVGTRRYMA 201
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 56/138 (40%), Gaps = 39/138 (28%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRS 647
G+ LH +H +LKP N+++ +D KI DFGL R T+S+ NF
Sbjct: 136 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----TAST-------NFMMTPY 183
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+R Y APE + + D++S G I+ EL+
Sbjct: 184 VVTR-------------------------YYRAPEVILGMGYKENVDIWSVGCIMGELVK 218
Query: 708 GKVIV--VDELGQGNGLL 723
G VI D + Q N ++
Sbjct: 219 GSVIFQGTDHIDQWNKVI 236
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 82/214 (38%), Gaps = 43/214 (20%)
Query: 499 GTALAVRRIGENSVDRFRD-FETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557
A+A++ + D R+ F + + + HP++V++ G + II + G
Sbjct: 38 AMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGE 96
Query: 558 LAN-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
L + + RK L + + A ++ LA+L K+ VH ++ RNVL+ K
Sbjct: 97 LRSFLQVRKFS-----LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVK 151
Query: 617 IGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXX 676
+GDFGL R + T + G
Sbjct: 152 LGDFGLSRYMEDSTYYKASKGK-----------------------------------LPI 176
Query: 677 XYHAPESLRSIKPNPKWDVYSFGVILLELLTGKV 710
+ APES+ + DV+ FGV + E+L V
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 210
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 482 ILGASGSSIMYKAV-LEDG----TALAVRRIGENSVDRF-RDFETQVRVIAKLVHPNLVR 535
+LG+ +YK + + +G +A++ + E + + ++ + V+A + +P++ R
Sbjct: 28 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 87
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ G +LI +P G L + R K +L L +A+G+ +L +
Sbjct: 88 LLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLED 141
Query: 595 KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637
++ VH +L RNVL+ KI DFGL +L+ + A G
Sbjct: 142 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 184
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 482 ILGASGSSIMYKAV-LEDG----TALAVRRIGENSVDRF-RDFETQVRVIAKLVHPNLVR 535
+LG+ +YK + + +G +A++ + E + + ++ + V+A + +P++ R
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ G +LI +P G L + R K +L L +A+G+ +L +
Sbjct: 89 LLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLED 142
Query: 595 KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637
++ VH +L RNVL+ KI DFGL +L+ + A G
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 185
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 34/123 (27%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
VA+G+ FL +K +H +L RN+LL KI DFGL R + D + G +
Sbjct: 157 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDA------ 210
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
+ APE++ + DV+SFGV+L E
Sbjct: 211 ----------------------------RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 242
Query: 705 LLT 707
+ +
Sbjct: 243 IFS 245
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 44/190 (23%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+++V+ + P +V G ++ E I + + GSL +K G +P + K
Sbjct: 57 ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV-LKKAG----RIPEQILGK 111
Query: 581 IAKGVARGLAFLHEK-KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639
++ V +GL +L EK K +H ++KP N+L+ + E K+ DFG+ + + A
Sbjct: 112 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEM--------A 163
Query: 640 RNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFG 699
F RS Y +PE L+ + + D++S G
Sbjct: 164 NEFVGTRS------------------------------YMSPERLQGTHYSVQSDIWSMG 193
Query: 700 VILLELLTGK 709
+ L+E+ G+
Sbjct: 194 LSLVEMAVGR 203
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 482 ILGASGSSIMYKAV-LEDG----TALAVRRIGENSVDRF-RDFETQVRVIAKLVHPNLVR 535
+LG+ +YK + + +G +A++ + E + + ++ + V+A + +P++ R
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ G +LI +P G L + R K +L L +A+G+ +L +
Sbjct: 85 LLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLED 138
Query: 595 KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637
++ VH +L RNVL+ KI DFGL +L+ + A G
Sbjct: 139 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 34/123 (27%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
VA+G+ FL +K +H +L RN+LL KI DFGL R + D + G +
Sbjct: 153 VAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA------ 206
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
+ APE++ + DV+SFGV+L E
Sbjct: 207 ----------------------------RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 238
Query: 705 LLT 707
+ +
Sbjct: 239 IFS 241
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 81/209 (38%), Gaps = 41/209 (19%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+++++ + H N++ I + + ++ + Y+ + + HL +
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ--HLSNDHICY 132
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSAR 640
+ RGL ++H +H +LKP N+LL + KI DFGL R+ D G
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV--ADPDHDHTGFLXE 190
Query: 641 NFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPK-WDVYSFG 699
++ Y APE + + K K D++S G
Sbjct: 191 XVATR-------------------------------WYRAPEIMLNSKGYTKSIDIWSVG 219
Query: 700 VILLELLTGKVIV-----VDELGQGNGLL 723
IL E+L+ + I +D+L G+L
Sbjct: 220 CILAEMLSNRPIFPGKHYLDQLNHILGIL 248
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 75/191 (39%), Gaps = 42/191 (21%)
Query: 519 ETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEAR 578
+ ++ V+++ P + + G Y + II +++ GS + P L
Sbjct: 68 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL------EPGPLDETQI 121
Query: 579 LKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638
I + + +GL +LH +K +H ++K NVLL E K+ DFG+ G
Sbjct: 122 ATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGV-------------AGQ 168
Query: 639 ARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSF 698
+ KR+ F + APE ++ + K D++S
Sbjct: 169 LTDTQIKRNXFVGTPF-----------------------WMAPEVIKQSAYDSKADIWSL 205
Query: 699 GVILLELLTGK 709
G+ +EL G+
Sbjct: 206 GITAIELARGE 216
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 81/209 (38%), Gaps = 41/209 (19%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+++++ + H N++ I + + ++ + Y+ + + HL +
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ--HLSNDHICY 133
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSAR 640
+ RGL ++H +H +LKP N+LL + KI DFGL R+ D G
Sbjct: 134 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV--ADPDHDHTGFLXE 191
Query: 641 NFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPK-WDVYSFG 699
++ Y APE + + K K D++S G
Sbjct: 192 XVATR-------------------------------WYRAPEIMLNSKGYTKSIDIWSVG 220
Query: 700 VILLELLTGKVIV-----VDELGQGNGLL 723
IL E+L+ + I +D+L G+L
Sbjct: 221 CILAEMLSNRPIFPGKHYLDQLNHILGIL 249
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 482 ILGASGSSIMYKAV-LEDG----TALAVRRIGENSVDRF-RDFETQVRVIAKLVHPNLVR 535
+LG+ +YK + + +G +A++ + E + + ++ + V+A + +P++ R
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ G +LI +P G L + R K +L L +A+G+ +L +
Sbjct: 82 LLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLED 135
Query: 595 KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637
++ VH +L RNVL+ KI DFGL +L+ + A G
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 49/126 (38%), Gaps = 40/126 (31%)
Query: 587 RGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKR 646
RGL ++H +H +LKP NV + D E +I DFGL R +A + + R
Sbjct: 134 RGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLAR---------QADEEMTGYVATR 184
Query: 647 STASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILLEL 705
Y APE L + N D++S G I+ EL
Sbjct: 185 ------------------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 214
Query: 706 LTGKVI 711
L GK +
Sbjct: 215 LQGKAL 220
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 482 ILGASGSSIMYKAV-LEDG----TALAVRRIGENSVDRF-RDFETQVRVIAKLVHPNLVR 535
+LG+ +YK + + +G +A++ + E + + ++ + V+A + +P++ R
Sbjct: 16 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 75
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ G +LI +P G L + R K +L L +A+G+ +L +
Sbjct: 76 LLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLED 129
Query: 595 KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637
++ VH +L RNVL+ KI DFGL +L+ + A G
Sbjct: 130 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 172
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 71/152 (46%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K +E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 52 GSFGRVMLVKH-METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++VP G + + R++G S P AR A+ + +LH +
Sbjct: 111 KDNSNLYMVMEYVPGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 163
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ K+ DFG + V G T
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAKRVKGRT 195
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 79/192 (41%), Gaps = 41/192 (21%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++F+ + + S+ +P
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKS 107
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSAR 640
+ +GLAF H + +H +LKP+N+L+ + K+ DFGL AR
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL----------------AR 151
Query: 641 NFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIK-PNPKWDVYSFG 699
FG T + + Y APE L K + D++S G
Sbjct: 152 AFGVPVRTYTHE--------------------VVTLWYRAPEILLGCKYYSTAVDIWSLG 191
Query: 700 VILLELLTGKVI 711
I E++T + +
Sbjct: 192 CIFAEMVTRRAL 203
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 79/192 (41%), Gaps = 41/192 (21%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++F+ + + S+ +P
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKS 106
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSAR 640
+ +GLAF H + +H +LKP+N+L+ + K+ DFGL AR
Sbjct: 107 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL----------------AR 150
Query: 641 NFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIK-PNPKWDVYSFG 699
FG T + + Y APE L K + D++S G
Sbjct: 151 AFGVPVRTYTHE--------------------VVTLWYRAPEILLGCKYYSTAVDIWSLG 190
Query: 700 VILLELLTGKVI 711
I E++T + +
Sbjct: 191 CIFAEMVTRRAL 202
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 79/192 (41%), Gaps = 41/192 (21%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++F+ + + S+ +P
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKS 108
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSAR 640
+ +GLAF H + +H +LKP+N+L+ + K+ DFGL AR
Sbjct: 109 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL----------------AR 152
Query: 641 NFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIK-PNPKWDVYSFG 699
FG T + + Y APE L K + D++S G
Sbjct: 153 AFGVPVRTYTHE--------------------VVTLWYRAPEILLGCKYYSTAVDIWSLG 192
Query: 700 VILLELLTGKVI 711
I E++T + +
Sbjct: 193 CIFAEMVTRRAL 204
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 34/123 (27%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
VA+G+ FL +K +H +L RN+LL KI DFGL R + D + G +
Sbjct: 148 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA------ 201
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
+ APE++ + DV+SFGV+L E
Sbjct: 202 ----------------------------RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 233
Query: 705 LLT 707
+ +
Sbjct: 234 IFS 236
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 82/214 (38%), Gaps = 43/214 (20%)
Query: 499 GTALAVRRIGENSVDRFRD-FETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557
A+A++ + D R+ F + + + HP++V++ G + II + G
Sbjct: 418 AMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGE 476
Query: 558 LAN-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
L + + RK L + + A ++ LA+L K+ VH ++ RNVL+ K
Sbjct: 477 LRSFLQVRKFS-----LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVK 531
Query: 617 IGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXX 676
+GDFGL R + T + G
Sbjct: 532 LGDFGLSRYMEDSTYYKASKGK-----------------------------------LPI 556
Query: 677 XYHAPESLRSIKPNPKWDVYSFGVILLELLTGKV 710
+ APES+ + DV+ FGV + E+L V
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 590
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 70/134 (52%), Gaps = 15/134 (11%)
Query: 499 GTALAVRRIGENSVDRFRDFETQV-RVIAKLVHPNLVRIRGFYWGVDEKL-------IIY 550
G ++A++++ ++ RFR+ E Q+ + +A L HPN+V+++ +++ + E+ ++
Sbjct: 48 GMSVAIKKVIQDP--RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVM 105
Query: 551 DFVPNGSLANAR--YRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVL 608
++VP+ R YR+ + P L ++ + + G L H ++KP NVL
Sbjct: 106 EYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSI--GCLHLPSVNVCHRDIKPHNVL 163
Query: 609 LGN-DMEPKIGDFG 621
+ D K+ DFG
Sbjct: 164 VNEADGTLKLCDFG 177
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 34/123 (27%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
VA+G+ FL +K +H +L RN+LL KI DFGL R + D + G +
Sbjct: 157 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA------ 210
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
+ APE++ + DV+SFGV+L E
Sbjct: 211 ----------------------------RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 242
Query: 705 LLT 707
+ +
Sbjct: 243 IFS 245
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 34/123 (27%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
VA+G+ FL +K +H +L RN+LL KI DFGL R + D + G +
Sbjct: 153 VAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDA------ 206
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
+ APE++ + DV+SFGV+L E
Sbjct: 207 ----------------------------RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 238
Query: 705 LLT 707
+ +
Sbjct: 239 IFS 241
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 49/128 (38%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI D GL R T G A +
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLAR----HTDDEMTGYVATRW-- 187
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 188 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 215 ELLTGRTL 222
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 34/123 (27%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
VA+G+ FL +K +H +L RN+LL KI DFGL R + D + G +
Sbjct: 207 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA------ 260
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
+ APE++ + DV+SFGV+L E
Sbjct: 261 ----------------------------RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 292
Query: 705 LLT 707
+ +
Sbjct: 293 IFS 295
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+++++ +L HPN++ + + +++DF+ + + +P H+ +
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMT 121
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
+ +GL +LH+ +H +LKP N+LL + K+ DFGL +
Sbjct: 122 L-----QGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAK 160
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 34/123 (27%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
VA+G+ FL +K +H +L RN+LL KI DFGL R + D + G +
Sbjct: 159 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA------ 212
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
+ APE++ + DV+SFGV+L E
Sbjct: 213 ----------------------------RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 244
Query: 705 LLT 707
+ +
Sbjct: 245 IFS 247
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 79/192 (41%), Gaps = 41/192 (21%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++F+ + + S+ +P
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKS 114
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSAR 640
+ +GLAF H + +H +LKP+N+L+ + K+ DFGL AR
Sbjct: 115 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL----------------AR 158
Query: 641 NFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIK-PNPKWDVYSFG 699
FG T + + Y APE L K + D++S G
Sbjct: 159 AFGVPVRTYTHE--------------------VVTLWYRAPEILLGCKYYSTAVDIWSLG 198
Query: 700 VILLELLTGKVI 711
I E++T + +
Sbjct: 199 CIFAEMVTRRAL 210
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 79/192 (41%), Gaps = 41/192 (21%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++F+ + + S+ +P
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKS 107
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSAR 640
+ +GLAF H + +H +LKP+N+L+ + K+ DFGL AR
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL----------------AR 151
Query: 641 NFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIK-PNPKWDVYSFG 699
FG T + + Y APE L K + D++S G
Sbjct: 152 AFGVPVRTYTHE--------------------VVTLWYRAPEILLGCKYYSTAVDIWSLG 191
Query: 700 VILLELLTGKVI 711
I E++T + +
Sbjct: 192 CIFAEMVTRRAL 203
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 34/123 (27%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
VA+G+ FL +K +H +L RN+LL KI DFGL R + D + G +
Sbjct: 209 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA------ 262
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
+ APE++ + DV+SFGV+L E
Sbjct: 263 ----------------------------RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 294
Query: 705 LLT 707
+ +
Sbjct: 295 IFS 297
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 79/192 (41%), Gaps = 41/192 (21%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++F+ + + S+ +P
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKS 107
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSAR 640
+ +GLAF H + +H +LKP+N+L+ + K+ DFGL AR
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL----------------AR 151
Query: 641 NFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIK-PNPKWDVYSFG 699
FG T + + Y APE L K + D++S G
Sbjct: 152 AFGVPVRTYTHE--------------------VVTLWYRAPEILLGCKYYSTAVDIWSLG 191
Query: 700 VILLELLTGKVI 711
I E++T + +
Sbjct: 192 CIFAEMVTRRAL 203
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 79/192 (41%), Gaps = 41/192 (21%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++F+ + + S+ +P
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKS 106
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSAR 640
+ +GLAF H + +H +LKP+N+L+ + K+ DFGL AR
Sbjct: 107 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL----------------AR 150
Query: 641 NFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIK-PNPKWDVYSFG 699
FG T + + Y APE L K + D++S G
Sbjct: 151 AFGVPVRTYTHE--------------------VVTLWYRAPEILLGCKYYSTAVDIWSLG 190
Query: 700 VILLELLTGKVI 711
I E++T + +
Sbjct: 191 CIFAEMVTRRAL 202
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 482 ILGASGSSIMYKAV-LEDG----TALAVRRIGENSVDRF-RDFETQVRVIAKLVHPNLVR 535
+LG+ +YK + + +G +A++ + E + + ++ + V+A + +P++ R
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ G +LI +P G L + R K +L L +A+G+ +L +
Sbjct: 82 LLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLED 135
Query: 595 KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637
++ VH +L RNVL+ KI DFGL +L+ + A G
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 34/123 (27%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
VA+G+ FL +K +H +L RN+LL KI DFGL R + D + G +
Sbjct: 200 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA------ 253
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
+ APE++ + DV+SFGV+L E
Sbjct: 254 ----------------------------RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 285
Query: 705 LLT 707
+ +
Sbjct: 286 IFS 288
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 34/123 (27%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
VA+G+ FL +K +H +L RN+LL KI DFGL R + D + G +
Sbjct: 148 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA------ 201
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
+ APE++ + DV+SFGV+L E
Sbjct: 202 ----------------------------RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 233
Query: 705 LLT 707
+ +
Sbjct: 234 IFS 236
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 33/167 (19%)
Query: 483 LGASGSSIMYKAV-LEDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIR-- 537
+G S++ + V L G A + I S + E + R+ L H N+VR+
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 538 ----GFYWGVDEKLIIYDFVPNGSL-----ANARYRKMGSSPCHLPWEARLKIAKGVARG 588
GF++ +++D V G L A Y + +S C + +
Sbjct: 72 ISEEGFHY------LVFDLVTGGELFEDIVAREYYSEADASHC----------IQQILEA 115
Query: 589 LAFLHEKKHVHGNLKPRNVLLGNDME---PKIGDFGLERLVTGDTSS 632
+ H+ VH +LKP N+LL + + K+ DFGL V GD +
Sbjct: 116 VLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQA 162
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 34/123 (27%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
VA+G+ FL +K +H +L RN+LL KI DFGL R + D + G +
Sbjct: 194 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA------ 247
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
+ APE++ + DV+SFGV+L E
Sbjct: 248 ----------------------------RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 279
Query: 705 LLT 707
+ +
Sbjct: 280 IFS 282
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 75/191 (39%), Gaps = 42/191 (21%)
Query: 519 ETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEAR 578
+ ++ V+++ P + + G Y + II +++ GS + P L
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL------EPGPLDETQI 106
Query: 579 LKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638
I + + +GL +LH +K +H ++K NVLL E K+ DFG+ G
Sbjct: 107 ATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGV-------------AGQ 153
Query: 639 ARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSF 698
+ KR+ F + APE ++ + K D++S
Sbjct: 154 LTDTQIKRNXFVGTPF-----------------------WMAPEVIKQSAYDSKADIWSL 190
Query: 699 GVILLELLTGK 709
G+ +EL G+
Sbjct: 191 GITAIELARGE 201
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 34/123 (27%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
VA+G+ FL +K +H +L RN+LL KI DFGL R + D + G +
Sbjct: 202 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA------ 255
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
+ APE++ + DV+SFGV+L E
Sbjct: 256 ----------------------------RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 287
Query: 705 LLT 707
+ +
Sbjct: 288 IFS 290
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 33/167 (19%)
Query: 483 LGASGSSIMYKAV-LEDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIR-- 537
LG S++ + + + G A + I S + E + R+ L HPN+VR+
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 538 ----GFYWGVDEKLIIYDFVPNGSL-----ANARYRKMGSSPCHLPWEARLKIAKGVARG 588
GF++ +++D V G L A Y + +S C + +
Sbjct: 72 ISEEGFHY------LVFDLVTGGELFEDIVAREYYSEADASHC----------IQQILES 115
Query: 589 LAFLHEKKHVHGNLKPRNVLLGNDME---PKIGDFGLERLVTGDTSS 632
+ H VH +LKP N+LL + + K+ DFGL V GD +
Sbjct: 116 VNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQA 162
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 79/192 (41%), Gaps = 41/192 (21%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++F+ + + S+ +P
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKS 106
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSAR 640
+ +GLAF H + +H +LKP+N+L+ + K+ DFGL AR
Sbjct: 107 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL----------------AR 150
Query: 641 NFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIK-PNPKWDVYSFG 699
FG T + + Y APE L K + D++S G
Sbjct: 151 AFGVPVRTYTHE--------------------VVTLWYRAPEILLGCKYYSTAVDIWSLG 190
Query: 700 VILLELLTGKVI 711
I E++T + +
Sbjct: 191 CIFAEMVTRRAL 202
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 7/123 (5%)
Query: 516 RDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLP 574
++ + V+A + +P++ R+ G +LI +P G L + R K +L
Sbjct: 62 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL- 119
Query: 575 WEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634
L +A+G+ +L +++ VH +L RNVL+ KI DFGL +L+ +
Sbjct: 120 ----LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175
Query: 635 AGG 637
A G
Sbjct: 176 AEG 178
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++F+ S+ ++ S+ +P
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMD-ASALTGIPLPLIKS 108
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
+ +GLAF H + +H +LKP N+L+ + K+ DFGL R
Sbjct: 109 YLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 49/128 (38%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI D GL R T G A +
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLAR----HTDDEMTGYVATRW-- 187
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 188 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 215 ELLTGRTL 222
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/215 (20%), Positives = 83/215 (38%), Gaps = 53/215 (24%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSP------CHLP 574
+++++ + H N++ IR + + ++ + Y+ + S C+
Sbjct: 91 EIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFL 150
Query: 575 WEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634
++ + RGL ++H +H +LKP N+L+ + KI DFGL R+ D
Sbjct: 151 YQ--------ILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARI--ADPEHDH 200
Query: 635 AGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPK-W 693
G ++ Y APE + + K K
Sbjct: 201 TGFLTEXVATR-------------------------------WYRAPEIMLNSKGYTKSI 229
Query: 694 DVYSFGVILLELLTGKVIV-----VDELGQGNGLL 723
D++S G IL E+L+ + I +D+L G+L
Sbjct: 230 DIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGIL 264
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 79/192 (41%), Gaps = 41/192 (21%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++F+ + + S+ +P
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKS 114
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSAR 640
+ +GLAF H + +H +LKP+N+L+ + K+ DFGL AR
Sbjct: 115 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL----------------AR 158
Query: 641 NFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIK-PNPKWDVYSFG 699
FG T + + Y APE L K + D++S G
Sbjct: 159 AFGVPVRTYTHE--------------------VVTLWYRAPEILLGXKYYSTAVDIWSLG 198
Query: 700 VILLELLTGKVI 711
I E++T + +
Sbjct: 199 CIFAEMVTRRAL 210
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++F+ S+ ++ S+ +P
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMD-ASALTGIPLPLIKS 110
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
+ +GLAF H + +H +LKP N+L+ + K+ DFGL R
Sbjct: 111 YLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 154
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 7/115 (6%)
Query: 524 VIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEARLKIA 582
V+A + +P++ R+ G +LI +P G L + R K +L L
Sbjct: 104 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNWC 157
Query: 583 KGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637
+A+G+ +L +++ VH +L RNVL+ KI DFGL +L+ + A G
Sbjct: 158 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 212
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++F+ + + S+ +P
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKS 107
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
+ +GLAF H + +H +LKP+N+L+ + K+ DFGL R
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 49/126 (38%), Gaps = 40/126 (31%)
Query: 587 RGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKR 646
RGL ++H +H +LKP NV + D E +I DFGL R +A + + R
Sbjct: 142 RGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLAR---------QADEEMTGYVATR 192
Query: 647 STASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILLEL 705
Y APE L + N D++S G I+ EL
Sbjct: 193 ------------------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Query: 706 LTGKVI 711
L GK +
Sbjct: 223 LQGKAL 228
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 27/126 (21%)
Query: 587 RGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKR 646
R + LH +H +LKP N+L+ ++ + K+ DFGL R++ ++++ + + + G
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARII-DESAADNSEPTGQQSGMVE 181
Query: 647 STASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILLEL 705
A+R Y APE L S K + DV+S G IL EL
Sbjct: 182 FVATR-------------------------WYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
Query: 706 LTGKVI 711
+ I
Sbjct: 217 FLRRPI 222
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 79/192 (41%), Gaps = 41/192 (21%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++F+ + + S+ +P
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKS 111
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSAR 640
+ +GLAF H + +H +LKP+N+L+ + K+ DFGL AR
Sbjct: 112 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL----------------AR 155
Query: 641 NFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIK-PNPKWDVYSFG 699
FG T + + Y APE L K + D++S G
Sbjct: 156 AFGVPVRTYTHE--------------------VVTLWYRAPEILLGCKYYSTAVDIWSLG 195
Query: 700 VILLELLTGKVI 711
I E++T + +
Sbjct: 196 CIFAEMVTRRAL 207
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 70/182 (38%), Gaps = 45/182 (24%)
Query: 530 HPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGL 589
HP LV + + + ++V G L R+ LP E + ++ L
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR-----KLPEEHARFYSAEISLAL 166
Query: 590 AFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGL--ERLVTGDTSSSKAGGSARNFGSKRS 647
+LHE+ ++ +LK NVLL ++ K+ D+G+ E L GDT+S+ G
Sbjct: 167 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCG----------- 215
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
Y APE LR D ++ GV++ E++
Sbjct: 216 ---------------------------TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA 248
Query: 708 GK 709
G+
Sbjct: 249 GR 250
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 11/150 (7%)
Query: 493 KAVLEDGTAL--AVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIY 550
K ++ GT + A ++I + V+ F+ ++ ++ L HPN++R+ + + ++
Sbjct: 43 KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVM 102
Query: 551 DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLG 610
+ G L + ++ +A +I K V +A+ H+ H +LKP N L
Sbjct: 103 ELCTGGEL----FERVVHKRVFRESDA-ARIMKDVLSAVAYCHKLNVAHRDLKPENFLFL 157
Query: 611 NDMEP---KIGDFGL-ERLVTGDTSSSKAG 636
D K+ DFGL R G +K G
Sbjct: 158 TDSPDSPLKLIDFGLAARFKPGKMMRTKVG 187
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 79/192 (41%), Gaps = 41/192 (21%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++F+ + + S+ +P
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKS 107
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSAR 640
+ +GLAF H + +H +LKP+N+L+ + K+ DFGL AR
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL----------------AR 151
Query: 641 NFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIK-PNPKWDVYSFG 699
FG T + + Y APE L K + D++S G
Sbjct: 152 AFGVPVRTYTHE--------------------VVTLWYRAPEILLGXKYYSTAVDIWSLG 191
Query: 700 VILLELLTGKVI 711
I E++T + +
Sbjct: 192 CIFAEMVTRRAL 203
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 49/126 (38%), Gaps = 40/126 (31%)
Query: 587 RGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKR 646
RGL ++H +H +LKP NV + D E +I DFGL R +A + + R
Sbjct: 142 RGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLAR---------QADEEMTGYVATR 192
Query: 647 STASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILLEL 705
Y APE L + N D++S G I+ EL
Sbjct: 193 ------------------------------WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Query: 706 LTGKVI 711
L GK +
Sbjct: 223 LQGKAL 228
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 7/123 (5%)
Query: 516 RDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLP 574
++ + V+A + +P++ R+ G +LI +P G L + R K +L
Sbjct: 69 KEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL- 126
Query: 575 WEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634
L +A+G+ +L +++ VH +L RNVL+ KI DFGL +L+ +
Sbjct: 127 ----LNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 182
Query: 635 AGG 637
A G
Sbjct: 183 AEG 185
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 54/138 (39%), Gaps = 45/138 (32%)
Query: 587 RGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKR 646
+GL ++H VH +LKP N+ + D E KI DFGL R A + R
Sbjct: 137 KGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR---------HADAEMTGYVVTR 187
Query: 647 STASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRS-IKPNPKWDVYSFGVILLEL 705
Y APE + S + N D++S G I+ E+
Sbjct: 188 ------------------------------WYRAPEVILSWMHYNQTVDIWSVGCIMAEM 217
Query: 706 LTGKVIV-----VDELGQ 718
LTGK + +D+L Q
Sbjct: 218 LTGKTLFKGKDYLDQLTQ 235
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++F+ + + S+ +P
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ----DLKTFMDASALTGIPLPLIKS 110
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
+ +GLAF H + +H +LKP+N+L+ + K+ DFGL R
Sbjct: 111 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 11/150 (7%)
Query: 493 KAVLEDGTAL--AVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIY 550
K ++ GT + A ++I + V+ F+ ++ ++ L HPN++R+ + + ++
Sbjct: 26 KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVM 85
Query: 551 DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLG 610
+ G L K +I K V +A+ H+ H +LKP N L
Sbjct: 86 ELCTGGELFERVVHKRVFRESDAA-----RIMKDVLSAVAYCHKLNVAHRDLKPENFLFL 140
Query: 611 NDMEP---KIGDFGL-ERLVTGDTSSSKAG 636
D K+ DFGL R G +K G
Sbjct: 141 TDSPDSPLKLIDFGLAARFKPGKMMRTKVG 170
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++F+ + + S+ +P
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKS 107
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
+ +GLAF H + +H +LKP+N+L+ + K+ DFGL R
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 28/37 (75%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
G+A+ H+++ +H +LKP+N+L+ + E KI DFGL R
Sbjct: 112 GIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 28/37 (75%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
G+A+ H+++ +H +LKP+N+L+ + E KI DFGL R
Sbjct: 112 GIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 54/138 (39%), Gaps = 45/138 (32%)
Query: 587 RGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKR 646
+GL ++H VH +LKP N+ + D E KI DFGL R A + R
Sbjct: 155 KGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR---------HADAEMTGYVVTR 205
Query: 647 STASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRS-IKPNPKWDVYSFGVILLEL 705
Y APE + S + N D++S G I+ E+
Sbjct: 206 ------------------------------WYRAPEVILSWMHYNQTVDIWSVGCIMAEM 235
Query: 706 LTGKVIV-----VDELGQ 718
LTGK + +D+L Q
Sbjct: 236 LTGKTLFKGKDYLDQLTQ 253
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 30/131 (22%)
Query: 516 RDFETQVRVIAKLVHPNLVRIR------GFYWGVDEKLIIYDFVPNGSL-----ANARYR 564
+ E + R+ L HPN+VR+ GF++ +++D V G L A Y
Sbjct: 48 QKLEREARICRLLKHPNIVRLHDSISEEGFHY------LVFDLVTGGELFEDIVAREYYS 101
Query: 565 KMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDME---PKIGDFG 621
+ +S C + + + H VH +LKP N+LL + + K+ DFG
Sbjct: 102 EADASHC----------IQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFG 151
Query: 622 LERLVTGDTSS 632
L V GD +
Sbjct: 152 LAIEVQGDQQA 162
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 28/37 (75%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
G+A+ H+++ +H +LKP+N+L+ + E KI DFGL R
Sbjct: 112 GIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++F+ + + S+ +P
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKS 108
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
+ +GLAF H + +H +LKP+N+L+ + K+ DFGL R
Sbjct: 109 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++F+ + + S+ +P
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKS 107
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
+ +GLAF H + +H +LKP+N+L+ + K+ DFGL R
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++F+ + + S+ +P
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKS 111
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
+ +GLAF H + +H +LKP+N+L+ + K+ DFGL R
Sbjct: 112 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++F+ + + S+ +P
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKS 106
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
+ +GLAF H + +H +LKP+N+L+ + K+ DFGL R
Sbjct: 107 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 49/128 (38%), Gaps = 40/128 (31%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ RGL ++H +H +LKP N+ + D E KI D GL R T G A +
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLAR----HTDDEMTGYVATRW-- 187
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPE-SLRSIKPNPKWDVYSFGVILL 703
Y APE L + N D++S G I+
Sbjct: 188 ---------------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMA 214
Query: 704 ELLTGKVI 711
ELLTG+ +
Sbjct: 215 ELLTGRTL 222
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 95/242 (39%), Gaps = 52/242 (21%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRI------- 536
GA G + + L D A+++I ++ ++ ++V ++A L H +VR
Sbjct: 17 GAFGQVVKARNAL-DSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLER 74
Query: 537 RGF---YWGVDEK---LIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLA 590
R F V +K I ++ N +L Y + S + + ++ + + L+
Sbjct: 75 RNFVKPMTAVKKKSTLFIQMEYCENRTL----YDLIHSENLNQQRDEYWRLFRQILEALS 130
Query: 591 FLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER-----LVTGDTSSSKAGGSARNFGSK 645
++H + +H +LKP N+ + KIGDFGL + L S GS+ N S
Sbjct: 131 YIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSA 190
Query: 646 RSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSI-KPNPKWDVYSFGVILLE 704
TA Y A E L N K D+YS G+I E
Sbjct: 191 IGTA---------------------------MYVATEVLDGTGHYNEKIDMYSLGIIFFE 223
Query: 705 LL 706
++
Sbjct: 224 MI 225
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++F+ + + S+ +P
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKS 107
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
+ +GLAF H + +H +LKP+N+L+ + K+ DFGL R
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++F+ + + S+ +P
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKS 110
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
+ +GLAF H + +H +LKP+N+L+ + K+ DFGL R
Sbjct: 111 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++F+ + + S+ +P
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKS 109
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
+ +GLAF H + +H +LKP+N+L+ + K+ DFGL R
Sbjct: 110 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++F+ + + S+ +P
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKS 106
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
+ +GLAF H + +H +LKP+N+L+ + K+ DFGL R
Sbjct: 107 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++F+ + + S+ +P
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKS 110
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
+ +GLAF H + +H +LKP+N+L+ + K+ DFGL R
Sbjct: 111 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++F+ + + S+ +P
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKS 109
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
+ +GLAF H + +H +LKP+N+L+ + K+ DFGL R
Sbjct: 110 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++F+ + + S+ +P
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKS 108
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
+ +GLAF H + +H +LKP+N+L+ + K+ DFGL R
Sbjct: 109 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 39/138 (28%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRS 647
G+ LH +H +LKP N+++ +D KI DFGL R + NF
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TACTNFMMTPY 185
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+R Y APE + + D++S G I+ EL+
Sbjct: 186 VVTR-------------------------YYRAPEVILGMGYAANVDIWSVGCIMGELVK 220
Query: 708 GKVIV--VDELGQGNGLL 723
G VI D + Q N ++
Sbjct: 221 GCVIFQGTDHIDQWNKVI 238
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 99/245 (40%), Gaps = 57/245 (23%)
Query: 484 GASGSSIMYKAV------LEDGTALAVRRIGENSVDR-FRDFETQVRVIAKL-VHPNLVR 535
GA G +M +AV ++ +AV+ + +++ ++ D +++ ++ + H N++
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPC-------------HLPWEARLKIA 582
+ G +I ++ G+L Y + P + ++ +
Sbjct: 106 LLGACTQDGPLYVIVEYASKGNLRE--YLRARRPPGMEXSYDINRVPEEQMTFKDLVSCT 163
Query: 583 KGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNF 642
+ARG+ +L +K +H +L RNVL+ + KI DFGL R +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDX----------- 212
Query: 643 GSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVIL 702
K++T R + + APE+L + DV+SFGV++
Sbjct: 213 -XKKTTNGRLPVK----------------------WMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 703 LELLT 707
E+ T
Sbjct: 250 WEIFT 254
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 72/152 (47%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K +E G A++ + + V + ++ E + R++ + P LV++ +
Sbjct: 52 GSFGRVMLVKH-METGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++ P G + + R++G S P AR A+ + +LH +
Sbjct: 111 KDNSNLYMVMEYAPGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 163
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+++ K+ DFGL + V G T
Sbjct: 164 YRDLKPENLMIDQQGYIKVTDFGLAKRVKGRT 195
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 92/242 (38%), Gaps = 52/242 (21%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW-- 541
GA G + + L D A+++I ++ ++ ++V ++A L H +VR +
Sbjct: 17 GAFGQVVKARNAL-DSRYYAIKKI-RHTEEKLSTILSEVXLLASLNHQYVVRYYAAWLER 74
Query: 542 --------GVDEK---LIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLA 590
V +K I ++ N +L Y + S + + ++ + + L+
Sbjct: 75 RNFVKPXTAVKKKSTLFIQXEYCENRTL----YDLIHSENLNQQRDEYWRLFRQILEALS 130
Query: 591 FLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTG-----DTSSSKAGGSARNFGSK 645
++H + +H NLKP N+ + KIGDFGL + V S GS+ N S
Sbjct: 131 YIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSA 190
Query: 646 RSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSI-KPNPKWDVYSFGVILLE 704
TA Y A E L N K D YS G+I E
Sbjct: 191 IGTAX---------------------------YVATEVLDGTGHYNEKIDXYSLGIIFFE 223
Query: 705 LL 706
+
Sbjct: 224 XI 225
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 99/245 (40%), Gaps = 57/245 (23%)
Query: 484 GASGSSIMYKAV------LEDGTALAVRRIGENSVDR-FRDFETQVRVIAKL-VHPNLVR 535
GA G +M +AV ++ +AV+ + +++ ++ D +++ ++ + H N++
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPC-------------HLPWEARLKIA 582
+ G +I ++ G+L Y + P + ++ +
Sbjct: 106 LLGACTQDGPLYVIVEYASKGNLRE--YLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 163
Query: 583 KGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNF 642
+ARG+ +L +K +H +L RNVL+ + KI DFGL R +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDX----------- 212
Query: 643 GSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVIL 702
K++T R + + APE+L + DV+SFGV++
Sbjct: 213 -XKKTTNGRLPVK----------------------WMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 703 LELLT 707
E+ T
Sbjct: 250 WEIFT 254
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDR--FRDFETQVRVIAKLVHPNLVRIRGFY 540
+G+ GSS +++ + E A++ + D + ++ + KL + IR +
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 541 WGVDEKLIIYDFVPNGSL-ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVH 599
+ + ++ I Y + G++ N+ +K S PWE R K + + +H+ VH
Sbjct: 96 YEITDQYI-YMVMECGNIDLNSWLKKKKSID---PWE-RKSYWKNMLEAVHTIHQHGIVH 150
Query: 600 GNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632
+LKP N L+ + M K+ DFG+ + DT+S
Sbjct: 151 SDLKPANFLIVDGM-LKLIDFGIANQMQPDTTS 182
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 78/165 (47%), Gaps = 17/165 (10%)
Query: 482 ILGASGSSIMYKAV-LEDG----TALAVRRIGENSVDRF-RDFETQVRVIAKLVHPNLVR 535
+LG+ +YK + + +G +A++ + E + + ++ + V+A + +P++ R
Sbjct: 19 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 78
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN-ARYRK--MGSSPCHLPWEARLKIAKGVARGLAFL 592
+ G +LI +P G L + R K +GS + L +A G+ +L
Sbjct: 79 LLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGS-------QYLLNWCVQIAEGMNYL 130
Query: 593 HEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637
+++ VH +L RNVL+ KI DFGL +L+ + A G
Sbjct: 131 EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 175
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDR--FRDFETQVRVIAKLVHPNLVRIRGFY 540
+G+ GSS +++ + E A++ + D + ++ + KL + IR +
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 541 WGVDEKLIIYDFVPNGSL-ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVH 599
+ + ++ I Y + G++ N+ +K S PWE R K + + +H+ VH
Sbjct: 80 YEITDQYI-YMVMECGNIDLNSWLKKKKSID---PWE-RKSYWKNMLEAVHTIHQHGIVH 134
Query: 600 GNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632
+LKP N L+ + M K+ DFG+ + DT+S
Sbjct: 135 SDLKPANFLIVDGM-LKLIDFGIANQMQPDTTS 166
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDR--FRDFETQVRVIAKLVHPNLVRIRGFY 540
+G+ GSS +++ + E A++ + D + ++ + KL + IR +
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 541 WGVDEKLIIYDFVPNGSL-ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVH 599
+ + ++ I Y + G++ N+ +K S PWE R K + + +H+ VH
Sbjct: 77 YEITDQYI-YMVMECGNIDLNSWLKKKKSID---PWE-RKSYWKNMLEAVHTIHQHGIVH 131
Query: 600 GNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632
+LKP N L+ + M K+ DFG+ + DT+S
Sbjct: 132 SDLKPANFLIVDGM-LKLIDFGIANQMQPDTTS 163
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 36/127 (28%)
Query: 583 KGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNF 642
K + +GL +LH +K +H ++K NVLL + K+ DFG+ G +
Sbjct: 127 KEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGV-------------AGQLTDT 173
Query: 643 GSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVIL 702
KR+T F + APE ++ + K D++S G+
Sbjct: 174 QIKRNTFVGTPF-----------------------WMAPEVIQQSAYDSKADIWSLGITA 210
Query: 703 LELLTGK 709
+EL G+
Sbjct: 211 IELAKGE 217
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++F+ + + S+ +P
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLS----MDLKDFMDASALTGIPLPLIKS 110
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
+ +GLAF H + +H +LKP+N+L+ + K+ DFGL R
Sbjct: 111 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++F+ + + S+ +P
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLS----MDLKDFMDASALTGIPLPLIKS 109
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
+ +GLAF H + +H +LKP+N+L+ + K+ DFGL R
Sbjct: 110 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 502 LAVRRIGENSVD-RFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN 560
+A++ I + +++ + E ++ V+ K+ HPN+V + Y +I V G L
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL-- 103
Query: 561 ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVL---LGNDMEPKI 617
+ ++ + +A I + V + +LH+ VH +LKP N+L L D + I
Sbjct: 104 --FDRIVEKGFYTERDASRLIFQ-VLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 618 GDFGLERLVTGDTSSSKAGGS 638
DFGL ++ + S A G+
Sbjct: 161 SDFGLSKMEDPGSVLSTACGT 181
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 77/191 (40%), Gaps = 42/191 (21%)
Query: 519 ETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEAR 578
+ ++ V+++ P + R G Y + II +++ GS + + P + A
Sbjct: 65 QQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDL----LKPGPLEETYIA- 119
Query: 579 LKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638
I + + +GL +LH ++ +H ++K NVLL + K+ DFG+ G
Sbjct: 120 -TILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGV-------------AGQ 165
Query: 639 ARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSF 698
+ KR+ F + APE ++ + K D++S
Sbjct: 166 LTDTQIKRNXFVGTPF-----------------------WMAPEVIKQSAYDFKADIWSL 202
Query: 699 GVILLELLTGK 709
G+ +EL G+
Sbjct: 203 GITAIELAKGE 213
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++F+ + + S+ +P
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKS 108
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
+ +GLAF H + +H +LKP N+L+ + K+ DFGL R
Sbjct: 109 YLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++F+ + + S+ +P
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKS 109
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
+ +GLAF H + +H +LKP N+L+ + K+ DFGL R
Sbjct: 110 YLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 153
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDR--FRDFETQVRVIAKLVHPNLVRIRGFY 540
+G+ GSS +++ + E A++ + D + ++ + KL + IR +
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 541 WGVDEKLIIYDFVPNGSL-ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVH 599
+ + ++ I Y + G++ N+ +K S PWE R K + + +H+ VH
Sbjct: 124 YEITDQYI-YMVMECGNIDLNSWLKKKKSID---PWE-RKSYWKNMLEAVHTIHQHGIVH 178
Query: 600 GNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632
+LKP N L+ + M K+ DFG+ + DT+S
Sbjct: 179 SDLKPANFLIVDGM-LKLIDFGIANQMQPDTTS 210
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 71/152 (46%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K +E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 52 GSFGRVMLVKH-METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ +++P G + + R++G S P AR A+ + +LH +
Sbjct: 111 KDNSNLYMVMEYMPGGDMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 163
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ K+ DFG + V G T
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAKRVKGRT 195
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 79/192 (41%), Gaps = 41/192 (21%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++F+ + + S+ +P
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ----DLKKFMDASALTGIPLPLIKS 107
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSAR 640
+ +GL+F H + +H +LKP+N+L+ + K+ DFGL AR
Sbjct: 108 YLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL----------------AR 151
Query: 641 NFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIK-PNPKWDVYSFG 699
FG T + + Y APE L K + D++S G
Sbjct: 152 AFGVPVRTYTHE--------------------VVTLWYRAPEILLGCKYYSTAVDIWSLG 191
Query: 700 VILLELLTGKVI 711
I E++T + +
Sbjct: 192 CIFAEMVTRRAL 203
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 482 ILGASGSSIMYKAV-LEDG----TALAVRRIGENSVDRF-RDFETQVRVIAKLVHPNLVR 535
+LG+ +YK + + +G +A++ + E + + ++ + V+A + +P++ R
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ G +LI+ +P G L + R K +L L +A+G+ +L +
Sbjct: 86 LLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLED 139
Query: 595 KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637
++ VH +L RNVL+ KI DFG +L+ + A G
Sbjct: 140 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 182
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 482 ILGASGSSIMYKAV-LEDG----TALAVRRIGENSVDRF-RDFETQVRVIAKLVHPNLVR 535
+LG+ +YK + + +G +A++ + E + + ++ + V+A + +P++ R
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ G +LI+ +P G L + R K +L L +A+G+ +L +
Sbjct: 84 LLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLED 137
Query: 595 KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637
++ VH +L RNVL+ KI DFG +L+ + A G
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 180
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 69/182 (37%), Gaps = 45/182 (24%)
Query: 530 HPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGL 589
HP LV + + + ++V G L R+ LP E + ++ L
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR-----KLPEEHARFYSAEISLAL 134
Query: 590 AFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGL--ERLVTGDTSSSKAGGSARNFGSKRS 647
+LHE+ ++ +LK NVLL ++ K+ D+G+ E L GDT+S G
Sbjct: 135 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCG----------- 183
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
Y APE LR D ++ GV++ E++
Sbjct: 184 ---------------------------TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA 216
Query: 708 GK 709
G+
Sbjct: 217 GR 218
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDR--FRDFETQVRVIAKLVHPNLVRIRGFY 540
+G+ GSS +++ + E A++ + D + ++ + KL + IR +
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 541 WGVDEKLIIYDFVPNGSL-ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVH 599
+ + ++ I Y + G++ N+ +K S PWE R K + + +H+ VH
Sbjct: 76 YEITDQYI-YMVMECGNIDLNSWLKKKKSID---PWE-RKSYWKNMLEAVHTIHQHGIVH 130
Query: 600 GNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632
+LKP N L+ + M K+ DFG+ + DT+S
Sbjct: 131 SDLKPANFLIVDGM-LKLIDFGIANQMQPDTTS 162
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDR--FRDFETQVRVIAKLVHPNLVRIRGFY 540
+G+ GSS +++ + E A++ + D + ++ + KL + IR +
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 541 WGVDEKLIIYDFVPNGSL-ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVH 599
+ + ++ I Y + G++ N+ +K S PWE R K + + +H+ VH
Sbjct: 124 YEITDQYI-YMVMECGNIDLNSWLKKKKSID---PWE-RKSYWKNMLEAVHTIHQHGIVH 178
Query: 600 GNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632
+LKP N L+ + M K+ DFG+ + DT+S
Sbjct: 179 SDLKPANFLIVDGM-LKLIDFGIANQMQPDTTS 210
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 71/152 (46%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K +E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 52 GSFGRVMLVKH-METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ +++P G + + R++G S P AR A+ + +LH +
Sbjct: 111 KDNSNLYMVMEYMPGGDMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 163
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ K+ DFG + V G T
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAKRVKGRT 195
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 482 ILGASGSSIMYKAV-LEDG----TALAVRRIGENSVDRF-RDFETQVRVIAKLVHPNLVR 535
+LG+ +YK + + +G +A++ + E + + ++ + V+A + +P++ R
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ G +LI+ +P G L + R K +L L +A+G+ +L +
Sbjct: 84 LLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLED 137
Query: 595 KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637
++ VH +L RNVL+ KI DFG +L+ + A G
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 180
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 18/161 (11%)
Query: 471 ELETLLKASAYILGASGSSIMYKAV-LEDGTALAVRRI----GENSVDRFRDFETQVRVI 525
+ E + K ++ +LG + + AV L++G AV+ I G + FR+ ET +
Sbjct: 9 KFEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQ 68
Query: 526 AKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS-LANARYRKMGSSPCHLPWEARLKIAKG 584
+ N++ + F+ ++++ + GS LA+ + +K H ++ +
Sbjct: 69 G---NKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQK------HFNEREASRVVRD 119
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGN--DMEP-KIGDFGL 622
VA L FLH K H +LKP N+L + + P KI DF L
Sbjct: 120 VAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDL 160
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDR--FRDFETQVRVIAKLVHPNLVRIRGFY 540
+G+ GSS +++ + E A++ + D + ++ + KL + IR +
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 541 WGVDEKLIIYDFVPNGSL-ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVH 599
+ + ++ I Y + G++ N+ +K S PWE R K + + +H+ VH
Sbjct: 124 YEITDQYI-YMVMECGNIDLNSWLKKKKSID---PWE-RKSYWKNMLEAVHTIHQHGIVH 178
Query: 600 GNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632
+LKP N L+ + M K+ DFG+ + DT+S
Sbjct: 179 SDLKPANFLIVDGM-LKLIDFGIANQMQPDTTS 210
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 72/154 (46%), Gaps = 13/154 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K +E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 38 GSFGRVMLVKH-METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 96
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++VP G + + R++G S P AR A+ + +LH +
Sbjct: 97 KDNSNLYMVMEYVPGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 149
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632
+ +LKP N+L+ ++ DFG + V G T +
Sbjct: 150 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT 183
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++F+ + + S+ +P
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ----DLKDFMDASALTGIPLPLIKS 107
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
+ +GLAF H + +H +LKP N+L+ + K+ DFGL R
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 151
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 72/154 (46%), Gaps = 13/154 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K +E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 53 GSFGRVMLVKH-METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 111
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++VP G + + R++G S P AR A+ + +LH +
Sbjct: 112 KDNSNLYMVMEYVPGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 164
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632
+ +LKP N+L+ ++ DFG + V G T +
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT 198
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 78/192 (40%), Gaps = 41/192 (21%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++ V + + S+ +P
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQ----DLKTFMDASALTGIPLPLIKS 106
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSAR 640
+ +GLAF H + +H +LKP+N+L+ + K+ DFGL AR
Sbjct: 107 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL----------------AR 150
Query: 641 NFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIK-PNPKWDVYSFG 699
FG T + + Y APE L K + D++S G
Sbjct: 151 AFGVPVRTYTHE--------------------VVTLWYRAPEILLGCKYYSTAVDIWSLG 190
Query: 700 VILLELLTGKVI 711
I E++T + +
Sbjct: 191 CIFAEMVTRRAL 202
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 502 LAVRRIGENSVD-RFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN 560
+A++ I + +++ + E ++ V+ K+ HPN+V + Y +I V G L
Sbjct: 46 VAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL-- 103
Query: 561 ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVL---LGNDMEPKI 617
+ ++ + +A I + V + +LH+ VH +LKP N+L L D + I
Sbjct: 104 --FDRIVEKGFYTERDASRLIFQ-VLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 618 GDFGLERLVTGDTSSSKAGGS 638
DFGL ++ + S A G+
Sbjct: 161 SDFGLSKMEDPGSVLSTACGT 181
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 83/191 (43%), Gaps = 34/191 (17%)
Query: 465 DGDKELELETLLKASAY---ILGASGS-SIMYKAVLEDGTALAVRRIGENSVDRFRDFET 520
DGD+E + + K S +LG +I+Y+ + D +AV+RI F D E
Sbjct: 11 DGDEETSVVIVGKISFCPKDVLGHGAEGTIVYRGMF-DNRDVAVKRILPECFS-FADREV 68
Query: 521 QVRVIAKLVHPNLVRI------RGFYWGVDE--KLIIYDFVPNGSLANARYRKMGSSPCH 572
Q+ + HPN++R R F + E + ++V A+ +G P
Sbjct: 69 QL-LRESDEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAH-----LGLEP-- 120
Query: 573 LPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLG-----NDMEPKIGDFGL-ERLV 626
+ + + GLA LH VH +LKP N+L+ ++ I DFGL ++L
Sbjct: 121 ------ITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA 174
Query: 627 TGDTSSSKAGG 637
G S S+ G
Sbjct: 175 VGRHSFSRRSG 185
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 69/182 (37%), Gaps = 45/182 (24%)
Query: 530 HPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGL 589
HP LV + + + ++V G L R+ LP E + ++ L
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR-----KLPEEHARFYSAEISLAL 119
Query: 590 AFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGL--ERLVTGDTSSSKAGGSARNFGSKRS 647
+LHE+ ++ +LK NVLL ++ K+ D+G+ E L GDT+S G
Sbjct: 120 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP--------- 170
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
Y APE LR D ++ GV++ E++
Sbjct: 171 -----------------------------NYIAPEILRGEDYGFSVDWWALGVLMFEMMA 201
Query: 708 GK 709
G+
Sbjct: 202 GR 203
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 71/152 (46%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K +E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 52 GSFGRVMLVKH-METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++VP G + + R++G S P AR A+ + +LH +
Sbjct: 111 KDNSNLYMVMEYVPGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 163
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ ++ DFG + V G T
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 79/201 (39%), Gaps = 55/201 (27%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ARG+ +L +K +H +L RNVL+ + KI DFGL R +
Sbjct: 153 LARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDY------------Y 200
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
K++T R + + APE+L + DV+SFGV++ E
Sbjct: 201 KKTTNGRLPVK----------------------WMAPEALFDRVYTHQSDVWSFGVLMWE 238
Query: 705 LLT-----GKVIVVDELGQGNGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSC 759
+ T I V+EL + LL E + + + C
Sbjct: 239 IFTLGGSPYPGIPVEELFK---LLKEGHR-------------MDKPANCTNELYMMMRDC 282
Query: 760 ASPLPQKRPSMKEALQALEKI 780
+P +RP+ K+ ++ L++I
Sbjct: 283 WHAVPSQRPTFKQLVEDLDRI 303
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/323 (19%), Positives = 126/323 (39%), Gaps = 78/323 (24%)
Query: 484 GASGSSIMYKAV------LEDGTALAVRRIGENSVDR-FRDFETQVRVIAKL-VHPNLVR 535
GA G +M +AV ++ +AV+ + +++ ++ D +++ ++ + H N++
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIH 105
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPC-------------HLPWEARLKIA 582
+ G +I ++ G+L Y + P + ++ +
Sbjct: 106 LLGACTQDGPLYVIVEYASKGNLRE--YLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 163
Query: 583 KGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNF 642
+ARG+ +L +K +H +L RNVL+ + KI DFGL R +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY----------- 212
Query: 643 GSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVIL 702
K++T R + + APE+L + DV+SFGV++
Sbjct: 213 -YKKTTNGRLPVK----------------------WMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 703 LELLT-----GKVIVVDELGQGNGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGY 757
E+ T I V+EL + LL E + + +
Sbjct: 250 WEIFTLGGSPYPGIPVEELFK---LLKEGHR-------------MDKPANCTNELYMMMR 293
Query: 758 SCASPLPQKRPSMKEALQALEKI 780
C +P +RP+ K+ ++ L++I
Sbjct: 294 DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 71/152 (46%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K +E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 52 GSFGRVMLVKH-METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++VP G + + R++G S P AR A+ + +LH +
Sbjct: 111 KDNSNLYMVMEYVPGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 163
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ ++ DFG + V G T
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 60/132 (45%), Gaps = 7/132 (5%)
Query: 499 GTALAVRRIGENSVDRF--RDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556
G +A+++ E+ D+ + +++++ +L H NLV + ++++FV +
Sbjct: 50 GRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHT 109
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
L + + P L ++ K + G+ F H +H ++KP N+L+ K
Sbjct: 110 ILDD-----LELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVK 164
Query: 617 IGDFGLERLVTG 628
+ DFG R +
Sbjct: 165 LCDFGFARTLAA 176
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 71/152 (46%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K +E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 53 GSFGRVMLVKH-METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 111
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++VP G + + R++G S P AR A+ + +LH +
Sbjct: 112 KDNSNLYMVMEYVPGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 164
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ ++ DFG + V G T
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 502 LAVRRIGENSVD-RFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN 560
+A++ I + +++ + E ++ V+ K+ HPN+V + Y +I V G L
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL-- 103
Query: 561 ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVL---LGNDMEPKI 617
+ ++ + +A I + V + +LH+ VH +LKP N+L L D + I
Sbjct: 104 --FDRIVEKGFYTERDASRLIFQ-VLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 618 GDFGLERLVTGDTSSSKAGGS 638
DFGL ++ + S A G+
Sbjct: 161 SDFGLSKMEDPGSVLSTACGT 181
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 71/152 (46%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K +E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 52 GSFGRVMLVKH-METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++VP G + + R++G S P AR A+ + +LH +
Sbjct: 111 KDNSNLYMVMEYVPGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 163
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ ++ DFG + V G T
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 502 LAVRRIGENSVD-RFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN 560
+A++ I + +++ + E ++ V+ K+ HPN+V + Y +I V G L
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL-- 103
Query: 561 ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVL---LGNDMEPKI 617
+ ++ + +A I + V + +LH+ VH +LKP N+L L D + I
Sbjct: 104 --FDRIVEKGFYTERDASRLIFQ-VLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMI 160
Query: 618 GDFGLERLVTGDTSSSKAGGS 638
DFGL ++ + S A G+
Sbjct: 161 SDFGLSKMEDPGSVLSTACGT 181
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 79/201 (39%), Gaps = 55/201 (27%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ARG+ +L +K +H +L RNVL+ + KI DFGL R +
Sbjct: 155 LARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY------------Y 202
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
K++T R + + APE+L + DV+SFGV++ E
Sbjct: 203 KKTTNGRLPVK----------------------WMAPEALFDRVYTHQSDVWSFGVLMWE 240
Query: 705 LLT-----GKVIVVDELGQGNGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSC 759
+ T I V+EL + LL E + + + C
Sbjct: 241 IFTLGGSPYPGIPVEELFK---LLKEGHR-------------MDKPANCTNELYMMMRDC 284
Query: 760 ASPLPQKRPSMKEALQALEKI 780
+P +RP+ K+ ++ L++I
Sbjct: 285 WHAVPSQRPTFKQLVEDLDRI 305
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 10/143 (6%)
Query: 499 GTALAVRRIGENSVD-RFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557
G AV+ I + ++ + E ++ V+ K+ H N+V + Y + ++ V G
Sbjct: 47 GKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGE 106
Query: 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVL-LGNDMEPK 616
L + ++ + +A I + V + +LH VH +LKP N+L D E K
Sbjct: 107 L----FDRIVEKGFYTEKDASTLI-RQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESK 161
Query: 617 --IGDFGLERLV-TGDTSSSKAG 636
I DFGL ++ GD S+ G
Sbjct: 162 IMISDFGLSKMEGKGDVMSTACG 184
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 12/102 (11%)
Query: 531 PNLVRIRGFYWGVDEKLIIYDFVPNG---SLANARYRKMGSSPCHLPWEARLKIAKGVAR 587
P ++ + Y E ++I ++ G SL +M S +++ K +
Sbjct: 89 PRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSE------NDVIRLIKQILE 142
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDM---EPKIGDFGLERLV 626
G+ +LH+ VH +LKP+N+LL + + KI DFG+ R +
Sbjct: 143 GVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI 184
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 34/123 (27%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ARG+ +L +K +H +L RNVL+ + KI DFGL R +
Sbjct: 158 LARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY------------Y 205
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
K++T R + + APE+L + DV+SFGV++ E
Sbjct: 206 KKTTNGRLPVK----------------------WMAPEALFDRVYTHQSDVWSFGVLMWE 243
Query: 705 LLT 707
+ T
Sbjct: 244 IFT 246
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 69/182 (37%), Gaps = 45/182 (24%)
Query: 530 HPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGL 589
HP LV + + + ++V G L R+ LP E + ++ L
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR-----KLPEEHARFYSAEISLAL 123
Query: 590 AFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGL--ERLVTGDTSSSKAGGSARNFGSKRS 647
+LHE+ ++ +LK NVLL ++ K+ D+G+ E L GDT+S G
Sbjct: 124 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP--------- 174
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
Y APE LR D ++ GV++ E++
Sbjct: 175 -----------------------------NYIAPEILRGEDYGFSVDWWALGVLMFEMMA 205
Query: 708 GK 709
G+
Sbjct: 206 GR 207
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 79/201 (39%), Gaps = 55/201 (27%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ARG+ +L +K +H +L RNVL+ + KI DFGL R +
Sbjct: 166 LARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY------------Y 213
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
K++T R + + APE+L + DV+SFGV++ E
Sbjct: 214 KKTTNGRLPVK----------------------WMAPEALFDRVYTHQSDVWSFGVLMWE 251
Query: 705 LLT-----GKVIVVDELGQGNGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSC 759
+ T I V+EL + LL E + + + C
Sbjct: 252 IFTLGGSPYPGIPVEELFK---LLKEGHR-------------MDKPANCTNELYMMMRDC 295
Query: 760 ASPLPQKRPSMKEALQALEKI 780
+P +RP+ K+ ++ L++I
Sbjct: 296 WHAVPSQRPTFKQLVEDLDRI 316
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 79/201 (39%), Gaps = 55/201 (27%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ARG+ +L +K +H +L RNVL+ + KI DFGL R +
Sbjct: 166 LARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY------------Y 213
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
K++T R + + APE+L + DV+SFGV++ E
Sbjct: 214 KKTTNGRLPVK----------------------WMAPEALFDRVYTHQSDVWSFGVLMWE 251
Query: 705 LLT-----GKVIVVDELGQGNGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSC 759
+ T I V+EL + LL E + + + C
Sbjct: 252 IFTLGGSPYPGIPVEELFK---LLKEGHR-------------MDKPANCTNELYMMMRDC 295
Query: 760 ASPLPQKRPSMKEALQALEKI 780
+P +RP+ K+ ++ L++I
Sbjct: 296 WHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 34/123 (27%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ARG+ +L +K +H +L RNVL+ + KI DFGL R +
Sbjct: 166 LARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY------------Y 213
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
K++T R + + APE+L + DV+SFGV++ E
Sbjct: 214 KKTTNGRLPVK----------------------WMAPEALFDRVYTHQSDVWSFGVLMWE 251
Query: 705 LLT 707
+ T
Sbjct: 252 IFT 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 34/123 (27%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ARG+ +L +K +H +L RNVL+ + KI DFGL R +
Sbjct: 166 LARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY------------Y 213
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
K++T R + + APE+L + DV+SFGV++ E
Sbjct: 214 KKTTNGRLPVK----------------------WMAPEALFDRVYTHQSDVWSFGVLMWE 251
Query: 705 LLT 707
+ T
Sbjct: 252 IFT 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 79/201 (39%), Gaps = 55/201 (27%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ARG+ +L +K +H +L RNVL+ + KI DFGL R +
Sbjct: 212 LARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY------------Y 259
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
K++T R + + APE+L + DV+SFGV++ E
Sbjct: 260 KKTTNGRLPVK----------------------WMAPEALFDRVYTHQSDVWSFGVLMWE 297
Query: 705 LLT-----GKVIVVDELGQGNGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSC 759
+ T I V+EL + LL E + + + C
Sbjct: 298 IFTLGGSPYPGIPVEELFK---LLKEGHR-------------MDKPANCTNELYMMMRDC 341
Query: 760 ASPLPQKRPSMKEALQALEKI 780
+P +RP+ K+ ++ L++I
Sbjct: 342 WHAVPSQRPTFKQLVEDLDRI 362
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 76/163 (46%), Gaps = 13/163 (7%)
Query: 482 ILGASGSSIMYKAV-LEDG----TALAVRRIGENSVDRF-RDFETQVRVIAKLVHPNLVR 535
+LG+ +YK + + +G +A++ + E + + ++ + V+A + +P++ R
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ G +LI +P G L + R K +L L +A+G+ +L +
Sbjct: 84 LLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLED 137
Query: 595 KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637
++ VH +L RNVL+ KI DFG +L+ + A G
Sbjct: 138 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 180
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 76/163 (46%), Gaps = 13/163 (7%)
Query: 482 ILGASGSSIMYKAV-LEDG----TALAVRRIGENSVDRF-RDFETQVRVIAKLVHPNLVR 535
+LG+ +YK + + +G +A++ + E + + ++ + V+A + +P++ R
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ G +LI +P G L + R K +L L +A+G+ +L +
Sbjct: 82 LLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLED 135
Query: 595 KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637
++ VH +L RNVL+ KI DFG +L+ + A G
Sbjct: 136 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 178
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 72/152 (47%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K +E G A++ + + V + ++ E + R++ + P LV++ +
Sbjct: 52 GSFGRVMLVKH-METGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++ P G + + R++G S P AR A+ + +LH +
Sbjct: 111 KDNSNLYMVMEYAPGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 163
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+++ ++ DFGL + V G T
Sbjct: 164 YRDLKPENLMIDQQGYIQVTDFGLAKRVKGRT 195
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 9/106 (8%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCH--LPWEAR 578
++ ++ +L H N+VR+ + ++++F + +K S C+ L E
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEF------CDQDLKKYFDS-CNGDLDPEIV 103
Query: 579 LKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
+ +GL F H + +H +LKP+N+L+ + E K+ DFGL R
Sbjct: 104 KSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 62/128 (48%), Gaps = 12/128 (9%)
Query: 504 VRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW-----GVDEKLIIYDFVPNGSL 558
+ R+ E+ +D R ++ ++ +L H ++V++ DE ++ + +
Sbjct: 86 ILRVFEDLIDCKRILR-EIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLE------I 138
Query: 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIG 618
A++ ++K+ +P +L + + G+ ++H +H +LKP N L+ D K+
Sbjct: 139 ADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVC 198
Query: 619 DFGLERLV 626
DFGL R V
Sbjct: 199 DFGLARTV 206
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 76/163 (46%), Gaps = 13/163 (7%)
Query: 482 ILGASGSSIMYKAV-LEDG----TALAVRRIGENSVDRF-RDFETQVRVIAKLVHPNLVR 535
+LG+ +YK + + +G +A++ + E + + ++ + V+A + +P++ R
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE 594
+ G +LI +P G L + R K +L L +A+G+ +L +
Sbjct: 89 LLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLED 142
Query: 595 KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637
++ VH +L RNVL+ KI DFG +L+ + A G
Sbjct: 143 RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 185
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HPN+V++ ++ ++++ V + + S+ +P
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQ----DLKKFMDASALTGIPLPLIKS 110
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
+ +GLAF H + +H +LKP+N+L+ + K+ DFGL R
Sbjct: 111 YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/323 (19%), Positives = 125/323 (38%), Gaps = 78/323 (24%)
Query: 484 GASGSSIMYKAV------LEDGTALAVRRIGENSVDR-FRDFETQVRVIAKL-VHPNLVR 535
GA G +M +AV ++ +AV+ + +++ ++ D +++ ++ + H N++
Sbjct: 46 GAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPC-------------HLPWEARLKIA 582
+ G +I ++ G+L Y + P + ++ +
Sbjct: 106 LLGACTQDGPLYVIVEYASKGNLRE--YLRARRPPGMEYSYDINRVPEEQMTFKDLVSCT 163
Query: 583 KGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNF 642
+ARG+ +L +K +H +L RNVL+ + KI DFGL R + N
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN-------------NI 210
Query: 643 GSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVIL 702
++T + + APE+L + DV+SFGV++
Sbjct: 211 DYYKNTTN---------------------GRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 249
Query: 703 LELLT-----GKVIVVDELGQGNGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGY 757
E+ T I V+EL + LL E + + +
Sbjct: 250 WEIFTLGGSPYPGIPVEELFK---LLKEGHR-------------MDKPANCTNELYMMMR 293
Query: 758 SCASPLPQKRPSMKEALQALEKI 780
C +P +RP+ K+ ++ L++I
Sbjct: 294 DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 55/138 (39%), Gaps = 39/138 (28%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRS 647
G+ LH +H +LKP N+++ +D KI DFGL R T TS F
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTS----------FMMTPY 185
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+R Y APE + + D++S GVI+ E++
Sbjct: 186 VVTR-------------------------YYRAPEVILGMGYKENVDIWSVGVIMGEMIK 220
Query: 708 GKVIV--VDELGQGNGLL 723
G V+ D + Q N ++
Sbjct: 221 GGVLFPGTDHIDQWNKVI 238
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 4/149 (2%)
Query: 482 ILGASGSSIMYKAV-LEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFY 540
+LG I+Y L + +A++ I E + ++ + L H N+V+ G +
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHG 600
I + VP GSL+ K G P + K + GL +LH+ + VH
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWG--PLKDNEQTIGFYTKQILEGLKYLHDNQIVHR 146
Query: 601 NLKPRNVLLGN-DMEPKIGDFGLERLVTG 628
++K NVL+ KI DFG + + G
Sbjct: 147 DIKGDNVLINTYSGVLKISDFGTSKRLAG 175
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 80/196 (40%), Gaps = 42/196 (21%)
Query: 513 DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCH 572
DR R + + ++A + HP +V++ + + +I DF+ G L + ++
Sbjct: 73 DRVRT-KMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMF 127
Query: 573 LPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632
+ + +A+ +A GL LH ++ +LKP N+LL + K+ DFGL S
Sbjct: 128 TEEDVKFYLAE-LALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGL---------S 177
Query: 633 SKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPK 692
+A + S T Y APE + +
Sbjct: 178 KEAIDHEKKAYSFCGTVE---------------------------YMAPEVVNRQGHSHS 210
Query: 693 WDVYSFGVILLELLTG 708
D +S+GV++ E+LTG
Sbjct: 211 ADWWSYGVLMFEMLTG 226
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K +E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 52 GSFGRVMLVKH-METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++ P G + + R++G S P AR A+ + +LH +
Sbjct: 111 KDNSNLYMVMEYAPGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 163
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+++ K+ DFG + V G T
Sbjct: 164 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT 195
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 79/201 (39%), Gaps = 55/201 (27%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644
+ARG+ +L +K +H +L RNVL+ + +I DFGL R +
Sbjct: 166 LARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDY------------Y 213
Query: 645 KRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLE 704
K++T R + + APE+L + DV+SFGV++ E
Sbjct: 214 KKTTNGRLPVK----------------------WMAPEALFDRVYTHQSDVWSFGVLMWE 251
Query: 705 LLT-----GKVIVVDELGQGNGLLVEDKNXXXXXXXXXXXXXFEGKEEALLSCFKLGYSC 759
+ T I V+EL + LL E + + + C
Sbjct: 252 IFTLGGSPYPGIPVEELFK---LLKEGHR-------------MDKPANCTNELYMMMRDC 295
Query: 760 ASPLPQKRPSMKEALQALEKI 780
+P +RP+ K+ ++ L++I
Sbjct: 296 WHAVPSQRPTFKQLVEDLDRI 316
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 55/138 (39%), Gaps = 39/138 (28%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRS 647
G+ LH +H +LKP N+++ +D KI DFGL R T TS F
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTS----------FMMTPY 185
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+R Y APE + + D++S GVI+ E++
Sbjct: 186 VVTR-------------------------YYRAPEVILGMGYKENVDIWSVGVIMGEMIK 220
Query: 708 GKVIV--VDELGQGNGLL 723
G V+ D + Q N ++
Sbjct: 221 GGVLFPGTDHIDQWNKVI 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 52 GSFGRVMLVKHK-ETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSF 110
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++VP G + + R++G S P AR A+ + +LH +
Sbjct: 111 KDNSNLYMVMEYVPGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 163
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ ++ DFG + V G T
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 68/154 (44%), Gaps = 12/154 (7%)
Query: 497 EDGTALAVRRIGENSVDRFRD-FETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555
E A+A++ + + + R+ F + + A+L HPN+V + G +I+ + +
Sbjct: 54 EQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSH 113
Query: 556 GSL-----ANARYRKMGSSPCHLPWEARLK------IAKGVARGLAFLHEKKHVHGNLKP 604
G L + + +GS+ ++ L+ + +A G+ +L VH +L
Sbjct: 114 GDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLAT 173
Query: 605 RNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638
RNVL+ + + KI D GL R V G S
Sbjct: 174 RNVLVYDKLNVKISDLGLFREVYAADYYKLLGNS 207
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 60/158 (37%), Gaps = 40/158 (25%)
Query: 504 VRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN--- 560
+R+I V+R + T+VR++ KL HPN+ R+ Y ++ + G L +
Sbjct: 64 IRQINPKDVERIK---TEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLN 120
Query: 561 -----------ARYRKMGSSPC-----------------HLPWEARLKIAKGVAR----G 588
K PC L + R K+ + R
Sbjct: 121 VFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180
Query: 589 LAFLHEKKHVHGNLKPRNVLLGND--MEPKIGDFGLER 624
L +LH + H ++KP N L + E K+ DFGL +
Sbjct: 181 LHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSK 218
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 52 GSFGRVMLVKHK-ETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSF 110
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++VP G + + R++G S P AR A+ + +LH +
Sbjct: 111 KDNSNLYMVMEYVPGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 163
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ ++ DFG + V G T
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/125 (20%), Positives = 59/125 (47%), Gaps = 6/125 (4%)
Query: 499 GTALAVRRIGENSV-DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557
G +A++ + +N++ +T++ + L H ++ ++ ++ ++ ++ P G
Sbjct: 35 GEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGE 94
Query: 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKI 617
L + S L E + + + +A++H + + H +LKP N+L + K+
Sbjct: 95 LFDYII-----SQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKL 149
Query: 618 GDFGL 622
DFGL
Sbjct: 150 IDFGL 154
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 52 GSFGRVMLVKHK-ETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSF 110
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++VP G + + R++G S P AR A+ + +LH +
Sbjct: 111 KDNSNLYMVMEYVPGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 163
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ ++ DFG + V G T
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 43/136 (31%)
Query: 580 KIAKGVARGLAFLHEKKHV-HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638
K+ + + L +L EK V H ++KP N+LL + K+ DFG+ + D + ++ G
Sbjct: 128 KMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGC 187
Query: 639 ARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNP-----KW 693
A Y APE + P +
Sbjct: 188 A-------------------------------------AYMAPERIDPPDPTKPDYDIRA 210
Query: 694 DVYSFGVILLELLTGK 709
DV+S G+ L+EL TG+
Sbjct: 211 DVWSLGISLVELATGQ 226
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 45 GSFGRVMLVKHK-ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 103
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++VP G + + R++G S P AR A+ + +LH +
Sbjct: 104 KDNSNLYMVMEYVPGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 156
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ ++ DFG + V G T
Sbjct: 157 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 188
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 88/223 (39%), Gaps = 46/223 (20%)
Query: 497 EDGTALAVRRIGENSVDRFRD-FETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555
E A+A++ + + + R+ F + + A+L HPN+V + G +I+ + +
Sbjct: 37 EQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSH 96
Query: 556 GSL-----ANARYRKMGSSPCHLPWEARLK------IAKGVARGLAFLHEKKHVHGNLKP 604
G L + + +GS+ ++ L+ + +A G+ +L VH +L
Sbjct: 97 GDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLAT 156
Query: 605 RNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXX 664
RNVL+ + + KI D GL R V G S
Sbjct: 157 RNVLVYDKLNVKISDLGLFREVYAADYYKLLGNS-------------------------- 190
Query: 665 XXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+ APE++ K + D++S+GV+L E+ +
Sbjct: 191 --------LLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 88/227 (38%), Gaps = 50/227 (22%)
Query: 482 ILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
I G+ + VL+ T L VR DR R + + ++ ++ HP +V++ +
Sbjct: 46 ISGSDARQLYAMKVLKKAT-LKVR-------DRVRT-KMERDILVEVNHPFIVKLHYAFQ 96
Query: 542 GVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGN 601
+ +I DF+ G L + ++ + + +A+ +A L LH ++ +
Sbjct: 97 TEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAE-LALALDHLHSLGIIYRD 151
Query: 602 LKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXX 661
LKP N+LL + K+ DFGL + S A +F
Sbjct: 152 LKPENILLDEEGHIKLTDFGLSK------ESIDHEKKAYSFCG----------------- 188
Query: 662 XXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTG 708
Y APE + D +SFGV++ E+LTG
Sbjct: 189 -------------TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 70/142 (49%), Gaps = 15/142 (10%)
Query: 503 AVRRIGENSVDRFRDFETQV---RVIAKLVHPN-LVRIRGFYWGVDEKLIIYDFVPNGSL 558
A++ + ++ V + D E + RV+A L P L ++ + VD + ++V G L
Sbjct: 48 AIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDL 107
Query: 559 ANARYRKMGS--SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616
+++G P + + A + I GL FLH++ ++ +LK NV+L ++ K
Sbjct: 108 M-YHIQQVGKFKEPQAVFYAAEISI------GLFFLHKRGIIYRDLKLDNVMLDSEGHIK 160
Query: 617 IGDFGL--ERLVTGDTSSSKAG 636
I DFG+ E ++ G T+ G
Sbjct: 161 IADFGMCKEHMMDGVTTREFCG 182
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 4/149 (2%)
Query: 482 ILGASGSSIMYKAV-LEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFY 540
+LG I+Y L + +A++ I E + ++ + L H N+V+ G +
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHG 600
I + VP GSL+ K G P + K + GL +LH+ + VH
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWG--PLKDNEQTIGFYTKQILEGLKYLHDNQIVHR 132
Query: 601 NLKPRNVLLGN-DMEPKIGDFGLERLVTG 628
++K NVL+ KI DFG + + G
Sbjct: 133 DIKGDNVLINTYSGVLKISDFGTSKRLAG 161
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K +E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 52 GSFGRVMLVKH-METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++VP G + + R++G P AR A+ + +LH +
Sbjct: 111 KDNSNLYMVMEYVPGGEMF-SHLRRIGRFXEP-----HARFYAAQ-IVLTFEYLHSLDLI 163
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ ++ DFG + V G T
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K +E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 52 GSFGRVMLVKH-METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++VP G + + R++G P AR A+ + +LH +
Sbjct: 111 KDNSNLYMVMEYVPGGEMF-SHLRRIGRFXEP-----HARFYAAQ-IVLTFEYLHSLDLI 163
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ ++ DFG + V G T
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 88/227 (38%), Gaps = 50/227 (22%)
Query: 482 ILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
I G+ + VL+ T L VR DR R + + ++ ++ HP +V++ +
Sbjct: 47 ISGSDARQLYAMKVLKKAT-LKVR-------DRVRT-KMERDILVEVNHPFIVKLHYAFQ 97
Query: 542 GVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGN 601
+ +I DF+ G L + ++ + + +A+ +A L LH ++ +
Sbjct: 98 TEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAE-LALALDHLHSLGIIYRD 152
Query: 602 LKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXX 661
LKP N+LL + K+ DFGL + S A +F
Sbjct: 153 LKPENILLDEEGHIKLTDFGLSK------ESIDHEKKAYSFCG----------------- 189
Query: 662 XXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTG 708
Y APE + D +SFGV++ E+LTG
Sbjct: 190 -------------TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K +E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 53 GSFGRVMLVKH-METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 111
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++VP G + + R++G P AR A+ + +LH +
Sbjct: 112 KDNSNLYMVMEYVPGGEMF-SHLRRIGRFXEP-----HARFYAAQ-IVLTFEYLHSLDLI 164
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ ++ DFG + V G T
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 88/227 (38%), Gaps = 50/227 (22%)
Query: 482 ILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
I G+ + VL+ T L VR DR R + + ++ ++ HP +V++ +
Sbjct: 46 ISGSDARQLYAMKVLKKAT-LKVR-------DRVRT-KMERDILVEVNHPFIVKLHYAFQ 96
Query: 542 GVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGN 601
+ +I DF+ G L + ++ + + +A+ +A L LH ++ +
Sbjct: 97 TEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAE-LALALDHLHSLGIIYRD 151
Query: 602 LKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXXX 661
LKP N+LL + K+ DFGL + S A +F
Sbjct: 152 LKPENILLDEEGHIKLTDFGLSK------ESIDHEKKAYSFCG----------------- 188
Query: 662 XXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTG 708
Y APE + D +SFGV++ E+LTG
Sbjct: 189 -------------TVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 53 GSFGRVMLVKHK-ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 111
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++VP G + + R++G S P AR A+ + +LH +
Sbjct: 112 KDNSNLYMVMEYVPGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 164
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ ++ DFG + V G T
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
++ ++ +L HP L+ + + E ++I +F+ G L + ++ + + +
Sbjct: 98 EISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGEL----FDRIAAEDYKMSEAEVIN 153
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP--KIGDFGL 622
+ GL +HE VH ++KP N++ KI DFGL
Sbjct: 154 YMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGL 197
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 53 GSFGRVMLVKHK-ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 111
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++VP G + + R++G S P AR A+ + +LH +
Sbjct: 112 KDNSNLYMVMEYVPGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 164
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ ++ DFG + V G T
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 53 GSFGRVMLVKHK-ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 111
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++VP G + + R++G S P AR A+ + +LH +
Sbjct: 112 KDNSNLYMVMEYVPGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 164
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ ++ DFG + V G T
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 58/134 (43%), Gaps = 18/134 (13%)
Query: 497 EDGTALAVRRIGENSVDRFRDFETQVRVIAKL-------VHPNLVRIRGFYWGVDEKLII 549
EDG AV+R S+ FR + + R +A++ HP VR+ + +E I+
Sbjct: 80 EDGRLYAVKR----SMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAW---EEGGIL 132
Query: 550 Y-DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVL 608
Y G G+S LP + LA LH + VH ++KP N+
Sbjct: 133 YLQTELCGPSLQQHCEAWGAS---LPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIF 189
Query: 609 LGNDMEPKIGDFGL 622
LG K+GDFGL
Sbjct: 190 LGPRGRCKLGDFGL 203
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 54/138 (39%), Gaps = 39/138 (28%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRS 647
G+ LH +H +LKP N+++ +D KI DFGL R T TS F
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTS----------FMMTPE 185
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+R Y APE + + D++S G I+ E++
Sbjct: 186 VVTR-------------------------YYRAPEVILGMGYKENVDIWSVGCIMGEMIK 220
Query: 708 GKVIV--VDELGQGNGLL 723
G V+ D + Q N ++
Sbjct: 221 GGVLFPGTDHIDQWNKVI 238
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 73 GSFGRVMLVKHK-ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 131
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++VP G + + R++G S P AR A+ + +LH +
Sbjct: 132 KDNSNLYMVMEYVPGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 184
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ ++ DFG + V G T
Sbjct: 185 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 216
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 48/126 (38%), Gaps = 40/126 (31%)
Query: 587 RGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKR 646
+GL ++H +H +LKP N+ + D E KI DFGL R S G +
Sbjct: 139 KGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR----QADSEMXGXVVTRW---- 190
Query: 647 STASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPES-LRSIKPNPKWDVYSFGVILLEL 705
Y APE L ++ D++S G I+ E+
Sbjct: 191 -------------------------------YRAPEVILNWMRYTQTVDIWSVGCIMAEM 219
Query: 706 LTGKVI 711
+TGK +
Sbjct: 220 ITGKTL 225
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 54/138 (39%), Gaps = 39/138 (28%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRS 647
G+ LH +H +LKP N+++ +D KI DFGL R T TS F
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTS----------FMMTPY 185
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+R Y APE + + D++S G I+ E++
Sbjct: 186 VVTR-------------------------YYRAPEVILGMGYKENVDIWSVGCIMGEMIK 220
Query: 708 GKVIV--VDELGQGNGLL 723
G V+ D + Q N ++
Sbjct: 221 GGVLFPGTDHIDQWNKVI 238
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K +E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 52 GSFGRVMLVKH-METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++ P G + + R++G S P AR A+ + +LH +
Sbjct: 111 KDNSNLYMVMEYAPGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 163
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+++ ++ DFG + V G T
Sbjct: 164 YRDLKPENLMIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 54/138 (39%), Gaps = 39/138 (28%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRS 647
G+ LH +H +LKP N+++ +D KI DFGL R T TS F
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTS----------FMMTPY 186
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+R Y APE + + D++S G I+ E++
Sbjct: 187 VVTR-------------------------YYRAPEVILGMGYKENVDIWSVGCIMGEMIK 221
Query: 708 GKVIV--VDELGQGNGLL 723
G V+ D + Q N ++
Sbjct: 222 GGVLFPGTDHIDQWNKVI 239
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 54/138 (39%), Gaps = 39/138 (28%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRS 647
G+ LH +H +LKP N+++ +D KI DFGL R T TS F
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTS----------FMMTPY 185
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+R Y APE + + D++S G I+ E++
Sbjct: 186 VVTR-------------------------YYRAPEVILGMGYKENVDIWSVGCIMGEMIK 220
Query: 708 GKVIV--VDELGQGNGLL 723
G V+ D + Q N ++
Sbjct: 221 GGVLFPGTDHIDQWNKVI 238
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 54/138 (39%), Gaps = 39/138 (28%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRS 647
G+ LH +H +LKP N+++ +D KI DFGL R T TS F
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTS----------FMMTPY 185
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+R Y APE + + D++S G I+ E++
Sbjct: 186 VVTR-------------------------YYRAPEVILGMGYKENVDIWSVGCIMGEMIK 220
Query: 708 GKVIV--VDELGQGNGLL 723
G V+ D + Q N ++
Sbjct: 221 GGVLFPGTDHIDQWNKVI 238
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 9/106 (8%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCH--LPWEAR 578
++ ++ +L H N+VR+ + ++++F + +K S C+ L E
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEF------CDQDLKKYFDS-CNGDLDPEIV 103
Query: 579 LKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
+ +GL F H + +H +LKP+N+L+ + E K+ +FGL R
Sbjct: 104 KSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLAR 149
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 54/123 (43%), Gaps = 5/123 (4%)
Query: 516 RDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPW 575
R+ +++++ L HP LV + + ++ ++ D + G L RY + H
Sbjct: 60 RNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDL---RYHLQQN--VHFKE 114
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635
E + L +L ++ +H ++KP N+LL I DF + ++ +T +
Sbjct: 115 ETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTM 174
Query: 636 GGS 638
G+
Sbjct: 175 AGT 177
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 54/138 (39%), Gaps = 39/138 (28%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRS 647
G+ LH +H +LKP N+++ +D KI DFGL R T TS F
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTS----------FMMTPY 185
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+R Y APE + + D++S G I+ E++
Sbjct: 186 VVTR-------------------------YYRAPEVILGMGYKENVDIWSVGCIMGEMIK 220
Query: 708 GKVIV--VDELGQGNGLL 723
G V+ D + Q N ++
Sbjct: 221 GGVLFPGTDHIDQWNKVI 238
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 67/143 (46%), Gaps = 9/143 (6%)
Query: 130 QLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNN-- 187
QL+ LDL+ + G LP M L+ L+ L LS N +S SLT + ++ N
Sbjct: 276 QLQELDLTATHLKG-LPSGMKGLNLLKKLVLSVNHFDQLCQISAANFPSLTHLYIRGNVK 334
Query: 188 --YFSDGLPSKFNSVQVLDLSSNLINGSLPPDIGGYSLRY---LNLSYNRLSGEIPPQFG 242
+ G K ++Q LDLS N I S + +L + LNLS+N G + Q
Sbjct: 335 KLHLGVGCLEKLGNLQTLDLSHNDIEASDCCSLQLKNLSHLQTLNLSHNEPLG-LQSQAF 393
Query: 243 EKIPVNATIDLSFNNLTGEIPES 265
++ P +DL+F L P+S
Sbjct: 394 KECPQLELLDLAFTRLHINAPQS 416
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 28/125 (22%)
Query: 130 QLRNLDLSNNLISGHLPET-MGSLHNLQLLNL-------SDNALAGKLPVSLTTLQSLTI 181
QL LDL+ + + P++ +LH LQ+LNL S+ L LPV L
Sbjct: 398 QLELLDLAFTRLHINAPQSPFQNLHFLQVLNLTYCFLDTSNQHLLAGLPV-------LRH 450
Query: 182 VSLKNNYFSDGLPSKFN------SVQVLDLSSNLINGSLPPDIGGY----SLRYLNLSYN 231
++LK N+F DG +K N S++VL LSS G L D + + +++LS+N
Sbjct: 451 LNLKGNHFQDGTITKTNLLQTVGSLEVLILSS---CGLLSIDQQAFHSLGKMSHVDLSHN 507
Query: 232 RLSGE 236
L+ +
Sbjct: 508 SLTCD 512
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K +E G A++ + + V + + E + R++ + P L ++ +
Sbjct: 53 GSFGRVMLVKH-METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSF 111
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++ P G + + R++G S P AR A+ + +LH +
Sbjct: 112 KDNSNLYMVMEYAPGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 164
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+++ K+ DFG + V G T
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT 196
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 54/138 (39%), Gaps = 39/138 (28%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRS 647
G+ LH +H +LKP N+++ +D KI DFGL R T TS F
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTS----------FMMTPY 185
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+R Y APE + + D++S G I+ E++
Sbjct: 186 VVTR-------------------------YYRAPEVILGMGYKENVDIWSVGCIMGEMIK 220
Query: 708 GKVIV--VDELGQGNGLL 723
G V+ D + Q N ++
Sbjct: 221 GGVLFPGTDHIDQWNKVI 238
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 13/151 (8%)
Query: 482 ILGASGSSIMYKAV-LEDGTALAVRRIGENSVDRFRDFETQVRVIAKLV-HPNLVRI-RG 538
+L G + +Y+A + G A++R+ N ++ R +V + KL HPN+V+
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94
Query: 539 FYWGVDE------KLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFL 592
G +E + ++ + G L + P L + LKI R + +
Sbjct: 95 ASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGP--LSCDTVLKIFYQTCRAVQHM 152
Query: 593 HEKKH--VHGNLKPRNVLLGNDMEPKIGDFG 621
H +K +H +LK N+LL N K+ DFG
Sbjct: 153 HRQKPPIIHRDLKVENLLLSNQGTIKLCDFG 183
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K +E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 52 GSFGRVMLVKH-METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++ P G + + R++G P AR A+ + +LH +
Sbjct: 111 KDNSNLYMVMEYAPGGEMF-SHLRRIGRFXEP-----HARFYAAQ-IVLTFEYLHSLDLI 163
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+++ K+ DFG + V G T
Sbjct: 164 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT 195
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 54/138 (39%), Gaps = 39/138 (28%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRS 647
G+ LH +H +LKP N+++ +D KI DFGL R T TS F
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTS----------FMMTPY 185
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+R Y APE + + D++S G I+ E++
Sbjct: 186 VVTR-------------------------YYRAPEVILGMGYKENVDIWSVGCIMGEMIK 220
Query: 708 GKVIV--VDELGQGNGLL 723
G V+ D + Q N ++
Sbjct: 221 GGVLFPGTDHIDQWNKVI 238
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K +E G A++ + + V + + E + R++ + P L ++ +
Sbjct: 53 GSFGRVMLVKH-METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSF 111
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++ P G + + R++G S P AR A+ + +LH +
Sbjct: 112 KDNSNLYMVMEYAPGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 164
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+++ K+ DFG + V G T
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT 196
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 53 GSFGRVMLVKHK-ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 111
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++ P G + + R++G S P AR A+ + +LH +
Sbjct: 112 KDNSNLYMVMEYAPGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 164
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+++ K+ DFG + V G T
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT 196
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K +E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 52 GSFGRVMLVKH-METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++V G + + R++G S P AR A+ + +LH +
Sbjct: 111 KDNSNLYMVMEYVAGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 163
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ ++ DFG + V G T
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 70/150 (46%), Gaps = 9/150 (6%)
Query: 483 LGASGSSIMYKAVLEDGTALAVRRIGENSVDR--FRDFETQVRVIAKLVHPNLVRIRGFY 540
+G+ GSS +++ + E A++ + D + ++ + KL + IR +
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 541 WGVDEKLIIYDFVPNGSL-ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVH 599
+ + ++ I Y + G++ N+ +K S PWE R K + + +H+ VH
Sbjct: 96 YEITDQYI-YMVMECGNIDLNSWLKKKKSID---PWE-RKSYWKNMLEAVHTIHQHGIVH 150
Query: 600 GNLKPRNVLLGNDMEPKIGDFGLERLVTGD 629
+LKP N L+ + M K+ DFG+ + D
Sbjct: 151 SDLKPANFLIVDGM-LKLIDFGIANQMQPD 179
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 54/138 (39%), Gaps = 39/138 (28%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRS 647
G+ LH +H +LKP N+++ +D KI DFGL R T TS F
Sbjct: 140 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTS----------FMMVPF 187
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+R Y APE + + D++S G I+ E++
Sbjct: 188 VVTR-------------------------YYRAPEVILGMGYKENVDIWSVGCIMGEMIK 222
Query: 708 GKVIV--VDELGQGNGLL 723
G V+ D + Q N ++
Sbjct: 223 GGVLFPGTDHIDQWNKVI 240
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 39/138 (28%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRS 647
G+ LH +H +LKP N+++ +D KI DFGL R T TS F +
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTS----------FMMEPE 185
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+R Y APE + + D++S G I+ E++
Sbjct: 186 VVTR-------------------------YYRAPEVILGMGYKENVDIWSVGCIMGEMVC 220
Query: 708 GKVIV--VDELGQGNGLL 723
K++ D + Q N ++
Sbjct: 221 HKILFPGRDYIDQWNKVI 238
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 45 GSFGRVMLVKHK-ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 103
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++VP G + + R++G P AR A+ + +LH +
Sbjct: 104 KDNSNLYMVMEYVPGGEMF-SHLRRIGRFXEP-----HARFYAAQ-IVLTFEYLHSLDLI 156
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ ++ DFG + V G T
Sbjct: 157 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 188
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLE-RLVTGDTSSSKAGGS 638
+ GL LH++ ++ +LKP NVLL +D +I D GL L G T + G+
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGT 352
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLE-RLVTGDTSSSKAGGS 638
+ GL LH++ ++ +LKP NVLL +D +I D GL L G T + G+
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGT 352
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLE-RLVTGDTSSSKAGGS 638
+ GL LH++ ++ +LKP NVLL +D +I D GL L G T + G+
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGT 352
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLE-RLVTGDTSSSKAGGS 638
+ GL LH++ ++ +LKP NVLL +D +I D GL L G T + G+
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGT 352
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K E G A++ + + V + + E + R+ + P LV++ +
Sbjct: 53 GSFGRVMLVKHK-ETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSF 111
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++ P G + + R++G S P AR A+ + +LH +
Sbjct: 112 KDNSNLYMVLEYAPGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 164
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ K+ DFG + V G T
Sbjct: 165 YRDLKPENLLIDQQGYIKVADFGFAKRVKGRT 196
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 74/168 (44%), Gaps = 17/168 (10%)
Query: 466 GDKELELETLLKASAYILGAS---GSSIMYKAVLEDGTAL--AVRRIGENSVDRFRDFET 520
G + L ++++ + Y++ + GS K + T + AV+ I ++ D + E
Sbjct: 14 GTENLYFQSMVFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI 73
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+R HPN++ ++ Y ++ + + G L + R+ S EA
Sbjct: 74 LLRYGQ---HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSE----REASF- 125
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLL----GNDMEPKIGDFGLER 624
+ + + + +LH + VH +LKP N+L GN +I DFG +
Sbjct: 126 VLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAK 173
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 5/116 (4%)
Query: 520 TQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARL 579
T+ RV+ HP L ++ + D + ++ G L + + AR
Sbjct: 57 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARF 112
Query: 580 KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635
A+ V+ L +LH + V+ ++K N++L D KI DFGL + D ++ K
Sbjct: 113 YGAEIVS-ALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 167
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 5/116 (4%)
Query: 520 TQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARL 579
T+ RV+ HP L ++ + D + ++ G L + + AR
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARF 109
Query: 580 KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635
A+ V+ L +LH + V+ ++K N++L D KI DFGL + D ++ K
Sbjct: 110 YGAEIVS-ALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 164
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 5/115 (4%)
Query: 520 TQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARL 579
T+ RV+ HP L ++ + D + ++ G L + + AR
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARF 109
Query: 580 KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634
A+ V+ L +LH + V+ ++K N++L D KI DFGL + D ++ K
Sbjct: 110 YGAEIVS-ALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK 163
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 5/115 (4%)
Query: 520 TQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARL 579
T+ RV+ HP L ++ + D + ++ G L + + AR
Sbjct: 59 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARF 114
Query: 580 KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634
A+ V+ L +LH + V+ ++K N++L D KI DFGL + D ++ K
Sbjct: 115 YGAEIVS-ALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK 168
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 5/115 (4%)
Query: 520 TQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARL 579
T+ RV+ HP L ++ + D + ++ G L + + AR
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARF 109
Query: 580 KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634
A+ V+ L +LH + V+ ++K N++L D KI DFGL + D ++ K
Sbjct: 110 YGAEIVS-ALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK 163
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 5/116 (4%)
Query: 520 TQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARL 579
T+ RV+ HP L ++ + D + ++ G L + + AR
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARF 109
Query: 580 KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635
A+ V+ L +LH + V+ ++K N++L D KI DFGL + D ++ K
Sbjct: 110 YGAEIVS-ALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 164
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 5/115 (4%)
Query: 520 TQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARL 579
T+ RV+ HP L ++ + D + ++ G L + + AR
Sbjct: 54 TESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL----FFHLSRERVFTEERARF 109
Query: 580 KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634
A+ V+ L +LH + V+ ++K N++L D KI DFGL + D ++ K
Sbjct: 110 YGAEIVS-ALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMK 163
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 39/138 (28%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRS 647
G+ LH +H +LKP N+++ +D KI DFGL R T TS F +
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTS----------FMMEPE 185
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+R Y APE + + D++S G I+ E++
Sbjct: 186 VVTR-------------------------YYRAPEVILGMGYKENVDLWSVGCIMGEMVC 220
Query: 708 GKVIV--VDELGQGNGLL 723
K++ D + Q N ++
Sbjct: 221 HKILFPGRDYIDQWNKVI 238
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 580 KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
++ + + GL ++H K +H ++K NVL+ D K+ DFGL R
Sbjct: 129 RVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 65/153 (42%), Gaps = 16/153 (10%)
Query: 482 ILGASGSSIMYKAV-LEDGTALAVRRIGENSVDRF--------RDFETQVRVIAKLVHPN 532
++G S++ + + E G AV+ + V +F D + + + L HP+
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIV---DVAKFTSSPGLSTEDLKREASICHMLKHPH 87
Query: 533 LVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFL 592
+V + Y ++++F+ L ++ + + A + + L +
Sbjct: 88 IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVAS-HYMRQILEALRYC 146
Query: 593 HEKKHVHGNLKPRNVLLG---NDMEPKIGDFGL 622
H+ +H ++KP NVLL N K+GDFG+
Sbjct: 147 HDNNIIHRDVKPENVLLASKENSAPVKLGDFGV 179
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 580 KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
++ + + GL ++H K +H ++K NVL+ D K+ DFGL R
Sbjct: 128 RVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 580 KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
++ + + GL ++H K +H ++K NVL+ D K+ DFGL R
Sbjct: 129 RVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 11/61 (18%)
Query: 573 LPWEARLKIAKGVARGLAFLHE-------KKH----VHGNLKPRNVLLGNDMEPKIGDFG 621
+ W +A+ ++RGL++LHE + H H + K +NVLL +D+ + DFG
Sbjct: 109 ITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFG 168
Query: 622 L 622
L
Sbjct: 169 L 169
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 580 KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624
++ + + GL ++H K +H ++K NVL+ D K+ DFGL R
Sbjct: 129 RVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 5/116 (4%)
Query: 499 GTALAVRRIG-ENSVDRFRDFETQVRVIAKLV-HPNLVRIRGFYWGVDEKLIIYDFVPNG 556
G + VRRI E + F ++KL HPN+V R + +E ++ F+ G
Sbjct: 52 GEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYG 111
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGND 612
S + L A I +GV + L ++H +VH ++K ++L+ D
Sbjct: 112 SAKDLICTHFMDGMNEL---AIAYILQGVLKALDYIHHMGYVHRSVKASHILISVD 164
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Query: 530 HPNLVRIRGFYWGVDEKLIIYDFVPNGSLANA---RYRKMGSSPCHLPWEARLK-IAKGV 585
H ++VR + D LI ++ GSLA+A YR M EA LK + V
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFK-----EAELKDLLLQV 122
Query: 586 ARGLAFLHEKKHVHGNLKPRNVLLGNDMEP 615
RGL ++H VH ++KP N+ + P
Sbjct: 123 GRGLRYIHSMSLVHMDIKPSNIFISRTSIP 152
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Query: 530 HPNLVRIRGFYWGVDEKLIIYDFVPNGSLANA---RYRKMGSSPCHLPWEARLK-IAKGV 585
H ++VR + D LI ++ GSLA+A YR M EA LK + V
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFK-----EAELKDLLLQV 122
Query: 586 ARGLAFLHEKKHVHGNLKPRNVLLGNDMEP 615
RGL ++H VH ++KP N+ + P
Sbjct: 123 GRGLRYIHSMSLVHMDIKPSNIFISRTSIP 152
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 54/138 (39%), Gaps = 39/138 (28%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRS 647
G+ LH +H +LKP N+++ +D KI DFGL R AG S F
Sbjct: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTS---FMMTPY 223
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+R Y APE + + D++S G I+ E++
Sbjct: 224 VVTR-------------------------YYRAPEVILGMGYKENVDIWSVGCIMGEMVR 258
Query: 708 GKVIV--VDELGQGNGLL 723
K++ D + Q N ++
Sbjct: 259 HKILFPGRDYIDQWNKVI 276
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K +E G A++ + + V + + E + R++ + P L ++ +
Sbjct: 53 GSFGRVMLVKH-METGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSF 111
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++ P G + + R++G P AR A+ + +LH +
Sbjct: 112 KDNSNLYMVMEYAPGGEMF-SHLRRIGRFXEP-----HARFYAAQ-IVLTFEYLHSLDLI 164
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+++ K+ DFG + V G T
Sbjct: 165 YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT 196
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 5/116 (4%)
Query: 499 GTALAVRRIG-ENSVDRFRDFETQVRVIAKLV-HPNLVRIRGFYWGVDEKLIIYDFVPNG 556
G + VRRI E + F ++KL HPN+V R + +E ++ F+ G
Sbjct: 36 GEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYG 95
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGND 612
S + L A I +GV + L ++H +VH ++K ++L+ D
Sbjct: 96 SAKDLICTHFMDGMNEL---AIAYILQGVLKALDYIHHMGYVHRSVKASHILISVD 148
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Query: 530 HPNLVRIRGFYWGVDEKLIIYDFVPNGSLANA---RYRKMGSSPCHLPWEARLK-IAKGV 585
H ++VR + D LI ++ GSLA+A YR M EA LK + V
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFK-----EAELKDLLLQV 124
Query: 586 ARGLAFLHEKKHVHGNLKPRNVLLGNDMEP 615
RGL ++H VH ++KP N+ + P
Sbjct: 125 GRGLRYIHSMSLVHMDIKPSNIFISRTSIP 154
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Query: 530 HPNLVRIRGFYWGVDEKLIIYDFVPNGSLANA---RYRKMGSSPCHLPWEARLK-IAKGV 585
H ++VR + D LI ++ GSLA+A YR M EA LK + V
Sbjct: 66 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFK-----EAELKDLLLQV 120
Query: 586 ARGLAFLHEKKHVHGNLKPRNVLLGNDMEP 615
RGL ++H VH ++KP N+ + P
Sbjct: 121 GRGLRYIHSMSLVHMDIKPSNIFISRTSIP 150
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 52 GSFGRVMLVKHK-ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++V G + + R++G S P AR A+ + +LH +
Sbjct: 111 KDNSNLYMVMEYVAGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 163
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ ++ DFG + V G T
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 52 GSFGRVMLVKHK-ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++V G + + R++G S P AR A+ + +LH +
Sbjct: 111 KDNSNLYMVMEYVAGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 163
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ ++ DFG + V G T
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 52/118 (44%), Gaps = 30/118 (25%)
Query: 130 QLRNL---DLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKN 186
+LRNL DLS + P SL +LQ+LN+S N
Sbjct: 173 ELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMS-----------------------HN 209
Query: 187 NYFS-DGLPSK-FNSVQVLDLSSNLINGSLPPDIGGY--SLRYLNLSYNRLSGEIPPQ 240
N+FS D P K NS+QVLD S N I S ++ + SL +LNL+ N + Q
Sbjct: 210 NFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQ 267
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 54/138 (39%), Gaps = 39/138 (28%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRS 647
G+ LH +H +LKP N+++ +D KI DFGL R T TS F
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTS----------FMMTPY 186
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+R Y APE + + D++S G I+ E++
Sbjct: 187 VVTR-------------------------YYRAPEVILGMGYKENVDIWSVGCIMGEMVR 221
Query: 708 GKVIV--VDELGQGNGLL 723
K++ D + Q N ++
Sbjct: 222 HKILFPGRDYIDQWNKVI 239
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 54/138 (39%), Gaps = 39/138 (28%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRS 647
G+ LH +H +LKP N+++ +D KI DFGL R T TS F
Sbjct: 137 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTS----------FMMTPY 184
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+R Y APE + + D++S G I+ E++
Sbjct: 185 VVTR-------------------------YYRAPEVILGMGYKENVDIWSVGCIMGEMVR 219
Query: 708 GKVIV--VDELGQGNGLL 723
K++ D + Q N ++
Sbjct: 220 HKILFPGRDYIDQWNKVI 237
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 54/138 (39%), Gaps = 39/138 (28%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRS 647
G+ LH +H +LKP N+++ +D KI DFGL R T TS F
Sbjct: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTS----------FMMTPY 223
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+R Y APE + + D++S G I+ E++
Sbjct: 224 VVTR-------------------------YYRAPEVILGMGYKENVDIWSVGCIMGEMVR 258
Query: 708 GKVIV--VDELGQGNGLL 723
K++ D + Q N ++
Sbjct: 259 HKILFPGRDYIDQWNKVI 276
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 54/138 (39%), Gaps = 39/138 (28%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRS 647
G+ LH +H +LKP N+++ +D KI DFGL R T TS F
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTS----------FMMTPY 185
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+R Y APE + + D++S G I+ E++
Sbjct: 186 VVTR-------------------------YYRAPEVILGMGYKENVDIWSVGCIMGEMVR 220
Query: 708 GKVIV--VDELGQGNGLL 723
K++ D + Q N ++
Sbjct: 221 HKILFPGRDYIDQWNKVI 238
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Query: 563 YRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHV-HGNLKPRNVLLGNDMEPKIGDFG 621
Y+++ +P + KIA + + L LH K V H ++KP NVL+ + K+ DFG
Sbjct: 96 YKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFG 155
Query: 622 LERLVTGDTSSSKAGGSARNFGSKR 646
+ + D + G +R
Sbjct: 156 ISGYLVDDVAKDIDAGCKPYMAPER 180
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 54/138 (39%), Gaps = 39/138 (28%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRS 647
G+ LH +H +LKP N+++ +D KI DFGL R AG S F
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTS---FMMTPY 179
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+R Y APE + + D++S G I+ E++
Sbjct: 180 VVTR-------------------------YYRAPEVILGMGYKENVDIWSVGCIMGEMVR 214
Query: 708 GKVIV--VDELGQGNGLL 723
K++ D + Q N ++
Sbjct: 215 HKILFPGRDYIDQWNKVI 232
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLG--NDMEP-KIGDFGL 622
+ + VA L FLH K H +LKP N+L N + P KI DFGL
Sbjct: 116 VVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGL 160
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 64/141 (45%), Gaps = 12/141 (8%)
Query: 497 EDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553
E G A++ + + V + + E + R++ + P LV++ + ++ ++V
Sbjct: 85 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 144
Query: 554 PNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN 611
G + + R++G S P AR A+ + +LH ++ +LKP N+L+
Sbjct: 145 AGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQ 197
Query: 612 DMEPKIGDFGLERLVTGDTSS 632
++ DFG + V G T +
Sbjct: 198 QGYIQVTDFGFAKRVKGATWT 218
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 9/114 (7%)
Query: 521 QVRVIAKLVHPNLVRIRG-FYWGVDEKL-IIYDFVPNG---SLANARYRKMGSSPCHLPW 575
++ ++ +L HPN++ ++ F D K+ +++D+ + + R K P LP
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPR 127
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVL-LGNDMEP---KIGDFGLERL 625
+ + G+ +LH +H +LKP N+L +G E KI D G RL
Sbjct: 128 GMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 181
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 54/138 (39%), Gaps = 39/138 (28%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRS 647
G+ LH +H +LKP N+++ +D KI DFGL R AG S F
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTS---FMMTPY 185
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+R Y APE + + D++S G I+ E++
Sbjct: 186 VVTR-------------------------YYRAPEVILGMGYKENVDIWSVGCIMGEMVR 220
Query: 708 GKVIV--VDELGQGNGLL 723
K++ D + Q N ++
Sbjct: 221 HKILFPGRDYIDQWNKVI 238
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 52 GSFGRVMLVKHK-ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++V G + + R++G S P AR A+ + +LH +
Sbjct: 111 KDNSNLYMVMEYVAGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 163
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ ++ DFG + V G T
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 36.6 bits (83), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 53 GSFGRVMLVKHK-ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 111
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++V G + + R++G S P AR A+ + +LH +
Sbjct: 112 KDNSNLYMVMEYVAGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 164
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ ++ DFG + V G T
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 196
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 52 GSFGRVMLVKHK-ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++V G + + R++G S P AR A+ + +LH +
Sbjct: 111 KDNSNLYMVMEYVAGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 163
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ ++ DFG + V G T
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 52 GSFGRVMLVKHK-ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++V G + + R++G S P AR A+ + +LH +
Sbjct: 111 KDNSNLYMVMEYVAGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 163
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ ++ DFG + V G T
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 39 GSFGRVMLVKHK-ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 97
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++V G + + R++G S P AR A+ + +LH +
Sbjct: 98 KDNSNLYMVMEYVAGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 150
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ ++ DFG + V G T
Sbjct: 151 YRDLKPENLLIDEQGYIQVTDFGFAKRVKGRT 182
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 54/138 (39%), Gaps = 39/138 (28%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRS 647
G+ LH +H +LKP N+++ +D KI DFGL R T TS F
Sbjct: 131 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTS----------FMMTPY 178
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+R Y APE + + D++S G I+ E++
Sbjct: 179 VVTR-------------------------YYRAPEVILGMGYKENVDIWSVGCIMGEMVR 213
Query: 708 GKVIV--VDELGQGNGLL 723
K++ D + Q N ++
Sbjct: 214 HKILFPGRDYIDQWNKVI 231
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 52 GSFGRVMLVKHK-ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++V G + + R++G S P AR A+ + +LH +
Sbjct: 111 KDNSNLYMVMEYVAGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 163
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ ++ DFG + V G T
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 52 GSFGRVMLVKHK-ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++V G + + R++G S P AR A+ + +LH +
Sbjct: 111 KDNSNLYMVMEYVAGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 163
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ ++ DFG + V G T
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 54/138 (39%), Gaps = 39/138 (28%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRS 647
G+ LH +H +LKP N+++ +D KI DFGL R T TS F
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTS----------FMMTPY 185
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+R Y APE + + D++S G I+ E++
Sbjct: 186 VVTR-------------------------YYRAPEVILGMGYKENVDIWSVGCIMGEMVR 220
Query: 708 GKVIV--VDELGQGNGLL 723
K++ D + Q N ++
Sbjct: 221 HKILFPGRDYIDQWNKVI 238
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 54/138 (39%), Gaps = 39/138 (28%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRS 647
G+ LH +H +LKP N+++ +D KI DFGL R T TS F
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTS----------FMMTPY 179
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+R Y APE + + D++S G I+ E++
Sbjct: 180 VVTR-------------------------YYRAPEVILGMGYKENVDIWSVGCIMGEMVR 214
Query: 708 GKVIV--VDELGQGNGLL 723
K++ D + Q N ++
Sbjct: 215 HKILFPGRDYIDQWNKVI 232
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 52 GSFGRVMLVKHK-ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++V G + + R++G S P AR A+ + +LH +
Sbjct: 111 KDNSNLYMVMEYVAGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 163
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ ++ DFG + V G T
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 54/138 (39%), Gaps = 39/138 (28%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRS 647
G+ LH +H +LKP N+++ +D KI DFGL R T TS F
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTS----------FMMTPY 186
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+R Y APE + + D++S G I+ E++
Sbjct: 187 VVTR-------------------------YYRAPEVILGMGYKENVDIWSVGCIMGEMVR 221
Query: 708 GKVIV--VDELGQGNGLL 723
K++ D + Q N ++
Sbjct: 222 HKILFPGRDYIDQWNKVI 239
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 52 GSFGRVMLVKHK-ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++V G + + R++G S P AR A+ + +LH +
Sbjct: 111 KDNSNLYMVMEYVAGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 163
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ ++ DFG + V G T
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 5/141 (3%)
Query: 482 ILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
++G +Y A+ + I ++ D+ + F+ +V + H N+V G
Sbjct: 40 LIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM 99
Query: 542 GVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGN 601
II +L Y + + L +IA+ + +G+ +LH K +H +
Sbjct: 100 SPPHLAIITSLCKGRTL----YSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKD 155
Query: 602 LKPRNVLLGNDMEPKIGDFGL 622
LK +NV N + I DFGL
Sbjct: 156 LKSKNVFYDNG-KVVITDFGL 175
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 36.6 bits (83), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 82/228 (35%), Gaps = 50/228 (21%)
Query: 487 GSSIMYKAVLEDGTAL--AVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVD 544
GS + K + T + AV+ I ++ D + E +R HPN++ ++ Y
Sbjct: 33 GSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQ---HPNIITLKDVYDDGK 89
Query: 545 EKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKP 604
++ + + G L + R+ S + + + + +LH + VH +LKP
Sbjct: 90 YVYVVTELMKGGELLDKILRQKFFSE-----REASAVLFTITKTVEYLHAQGVVHRDLKP 144
Query: 605 RNVLL----GNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXX 660
N+L GN +I DFG + + + NF
Sbjct: 145 SNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFV----------------- 187
Query: 661 XXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTG 708
APE L + D++S GV+L +LTG
Sbjct: 188 -------------------APEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 52 GSFGRVMLVKHK-ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++V G + + R++G S P AR A+ + +LH +
Sbjct: 111 KDNSNLYMVMEYVAGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 163
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ ++ DFG + V G T
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 54/138 (39%), Gaps = 39/138 (28%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRS 647
G+ LH +H +LKP N+++ +D KI DFGL R T TS F
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTS----------FMMTPY 185
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+R Y APE + + D++S G I+ E++
Sbjct: 186 VVTR-------------------------YYRAPEVILGMGYKENVDIWSVGCIMGEMVR 220
Query: 708 GKVIV--VDELGQGNGLL 723
K++ D + Q N ++
Sbjct: 221 HKILFPGRDYIDQWNKVI 238
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 54/138 (39%), Gaps = 39/138 (28%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRS 647
G+ LH +H +LKP N+++ +D KI DFGL R T TS F
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTS----------FMMTPY 185
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+R Y APE + + D++S G I+ E++
Sbjct: 186 VVTR-------------------------YYRAPEVILGMGYKENVDIWSVGCIMGEMVR 220
Query: 708 GKVIV--VDELGQGNGLL 723
K++ D + Q N ++
Sbjct: 221 HKILFPGRDYIDQWNKVI 238
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 87/232 (37%), Gaps = 58/232 (25%)
Query: 482 ILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
+ GA+ I VL+ A+ VR + + + + ++ ++ HP +V + +
Sbjct: 39 VTGANTGKIFAMKVLKK--AMIVRNAKDTAHTK-----AERNILEEVKHPFIVDLIYAFQ 91
Query: 542 GVDEKLIIYDFVPNGSLANARYRK---MGSSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
+ +I +++ G L R+ M + C E ++ L LH+K +
Sbjct: 92 TGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAE--------ISMALGHLHQKGII 143
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGL--ERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQD 656
+ +LKP N++L + K+ DFGL E + G + + G
Sbjct: 144 YRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCG-------------------- 183
Query: 657 LXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTG 708
Y APE L N D +S G ++ ++LTG
Sbjct: 184 ------------------TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 54/138 (39%), Gaps = 39/138 (28%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRS 647
G+ LH +H +LKP N+++ +D KI DFGL R AG S F
Sbjct: 131 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR---------TAGTS---FMMTPY 178
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+R Y APE + + D++S G I+ E++
Sbjct: 179 VVTR-------------------------YYRAPEVILGMGYKENVDIWSVGCIMGEMVR 213
Query: 708 GKVIV--VDELGQGNGLL 723
K++ D + Q N ++
Sbjct: 214 HKILFPGRDYIDQWNKVI 231
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 54/138 (39%), Gaps = 39/138 (28%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRS 647
G+ LH +H +LKP N+++ +D KI DFGL R T TS F
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTS----------FMMTPY 185
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+R Y APE + + D++S G I+ E++
Sbjct: 186 VVTR-------------------------YYRAPEVILGMGYKENVDIWSVGCIMGEMVR 220
Query: 708 GKVIV--VDELGQGNGLL 723
K++ D + Q N ++
Sbjct: 221 HKILFPGRDYIDQWNKVI 238
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 54/138 (39%), Gaps = 39/138 (28%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRS 647
G+ LH +H +LKP N+++ +D KI DFGL R T TS F
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTS----------FMMTPY 179
Query: 648 TASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLT 707
+R Y APE + + D++S G I+ E++
Sbjct: 180 VVTR-------------------------YYRAPEVILGMGYKENVDLWSVGCIMGEMVC 214
Query: 708 GKVIV--VDELGQGNGLL 723
K++ D + Q N ++
Sbjct: 215 HKILFPGRDYIDQWNKVI 232
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 13/102 (12%)
Query: 525 IAKLVHPNLVRIRGFYWGVDEK-----LIIYDFVPNGSLANARYRKMGSSPCHLPWEARL 579
+A++VHP++V+I F D I+ ++V SL ++ +K LP +
Sbjct: 133 LAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQK-------LPVAEAI 185
Query: 580 KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFG 621
+ L++LH V+ +LKP N++L + + K+ D G
Sbjct: 186 AYLLEILPALSYLHSIGLVYNDLKPENIML-TEEQLKLIDLG 226
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 36.2 bits (82), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 52/118 (44%), Gaps = 30/118 (25%)
Query: 130 QLRNL---DLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKN 186
+LRNL DLS + P SL +LQ+LN+S N
Sbjct: 492 ELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMS-----------------------HN 528
Query: 187 NYFS-DGLPSK-FNSVQVLDLSSNLINGSLPPDIGGY--SLRYLNLSYNRLSGEIPPQ 240
N+FS D P K NS+QVLD S N I S ++ + SL +LNL+ N + Q
Sbjct: 529 NFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQ 586
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 163 NALAGKLP-VSLTTLQSLTIVSLKN-NYFSD-GLPSKFNSVQVLDLSSNLIN---GSLPP 216
N G+ P + L +L+ LT S K N FS+ LPS ++ LDLS N ++
Sbjct: 337 NCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPS----LEFLDLSRNGLSFKGCCSQS 392
Query: 217 DIGGYSLRYLNLSYN 231
D G SL+YL+LS+N
Sbjct: 393 DFGTISLKYLDLSFN 407
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 36.2 bits (82), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTS 631
G+ LH +H +LKP N+++ +D KI DFGL R T TS
Sbjct: 143 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTS 184
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 36.2 bits (82), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 7/140 (5%)
Query: 484 GASGS-SIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
GA G + V E+ A+ + + + +VD + + ++ + A L H N+V+ G
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINAMLNHENVVKFYGHRRE 76
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ + + ++ G L + +G +P + + G+ +LH H ++
Sbjct: 77 GNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 603 KPRNVLLGNDMEPKIGDFGL 622
KP N+LL KI DFGL
Sbjct: 132 KPENLLLDERDNLKISDFGL 151
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 36.2 bits (82), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 528 LVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVAR 587
L HPN+VR + II ++ G L Y ++ ++ EAR + ++
Sbjct: 73 LRHPNIVRFKEVILTPTHLAIIMEYASGGEL----YERICNAGRFSEDEARFFFQQLLS- 127
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEP--KIGDFGLER 624
G+++ H + H +LK N LL P KI DFG +
Sbjct: 128 GVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSK 166
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 36.2 bits (82), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 8/115 (6%)
Query: 130 QLRNLDLSNNLISGHLPET-MGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNY 188
QL LD++ + P + +LH L++LNLS L L LQ L ++L+ N
Sbjct: 400 QLELLDVAFTHLHVKAPHSPFQNLHLLRVLNLSHCLLDTSNQHLLAGLQDLRHLNLQGNS 459
Query: 189 FSDGLPSKFN------SVQVLDLSS-NLINGSLPPDIGGYSLRYLNLSYNRLSGE 236
F DG SK N S+++L LSS NL++ G ++ +L+LS+N L+G+
Sbjct: 460 FQDGSISKTNLLQMVGSLEILILSSCNLLSIDQQAFHGLRNVNHLDLSHNSLTGD 514
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 52/118 (44%), Gaps = 30/118 (25%)
Query: 130 QLRNL---DLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKN 186
+LRNL DLS + P SL +LQ+LN+S N
Sbjct: 468 ELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMS-----------------------HN 504
Query: 187 NYFS-DGLPSK-FNSVQVLDLSSNLINGSLPPDIGGY--SLRYLNLSYNRLSGEIPPQ 240
N+FS D P K NS+QVLD S N I S ++ + SL +LNL+ N + Q
Sbjct: 505 NFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQ 562
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 35.8 bits (81), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 52 GSFGRVMLVKHK-ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++V G + + R++G S P AR A+ + +LH +
Sbjct: 111 KDNSNLYMVMEYVAGGEMF-SHLRRIGRFSEP-----HARFYAAQ-IVLTFEYLHSLDLI 163
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+++ ++ DFG + V G T
Sbjct: 164 YRDLKPENLIIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 64/144 (44%), Gaps = 18/144 (12%)
Query: 482 ILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541
+ GA+ I VL+ A+ VR + + + + ++ ++ HP +V + +
Sbjct: 39 VTGANTGKIFAMKVLKK--AMIVRNAKDTAHTK-----AERNILEEVKHPFIVDLIYAFQ 91
Query: 542 GVDEKLIIYDFVPNGSLANARYRK---MGSSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
+ +I +++ G L R+ M + C E ++ L LH+K +
Sbjct: 92 TGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAE--------ISMALGHLHQKGII 143
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGL 622
+ +LKP N++L + K+ DFGL
Sbjct: 144 YRDLKPENIMLNHQGHVKLTDFGL 167
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 52 GSFGRVMLVKHK-ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++V G + + R++G + P AR A+ + +LH +
Sbjct: 111 KDNSNLYMVMEYVAGGEMF-SHLRRIGRFAEP-----HARFYAAQ-IVLTFEYLHSLDLI 163
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ ++ DFG + V G T
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 12/126 (9%)
Query: 503 AVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANAR 562
AV+ I ++ D + E +R HPN++ ++ Y ++ + + G L +
Sbjct: 56 AVKVIDKSKRDPSEEIEILLRYGQ---HPNIITLKDVYDDGKHVYLVTELMRGGELLDKI 112
Query: 563 YRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLL----GNDMEPKIG 618
R+ S EA + + + + +LH + VH +LKP N+L GN +I
Sbjct: 113 LRQKFFSE----REASF-VLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRIC 167
Query: 619 DFGLER 624
DFG +
Sbjct: 168 DFGFAK 173
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 52 GSFGRVMLVKHK-ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++V G + + R++G P AR A+ + +LH +
Sbjct: 111 KDNSNLYMVMEYVAGGEMF-SHLRRIGRFXEP-----HARFYAAQ-IVLTFEYLHSLDLI 163
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ ++ DFG + V G T
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 53/140 (37%), Gaps = 38/140 (27%)
Query: 573 LPWEARLKIAKGVARGLAFLHEK-KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTS 631
+P E KI + L L E K +H ++KP N+LL K+ DFG+ + +
Sbjct: 122 IPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIA 181
Query: 632 SSKAGGSARNFGSKR--STASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKP 689
++ G +R +ASR + +RS
Sbjct: 182 KTRDAGCRPYMAPERIDPSASRQGY----------------------------DVRS--- 210
Query: 690 NPKWDVYSFGVILLELLTGK 709
DV+S G+ L EL TG+
Sbjct: 211 ----DVWSLGITLYELATGR 226
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 563 YRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHV-HGNLKPRNVLLGNDMEPKIGDFG 621
Y+++ +P + KIA + + L LH K V H ++KP NVL+ + K DFG
Sbjct: 123 YKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFG 182
Query: 622 LERLVTGDTSSSKAGG 637
+ + D + G
Sbjct: 183 ISGYLVDDVAKDIDAG 198
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 26/137 (18%)
Query: 506 RIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGF--------------YWGVDEKL- 547
R+G S V R +D +T + K V + R+ Y V E
Sbjct: 65 RVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPW 124
Query: 548 --IIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPR 605
I + + GSL ++MG LP + L GL +LH ++ +HG++K
Sbjct: 125 VNIFMELLEGGSLGQL-IKQMGC----LPEDRALYYLGQALEGLEYLHTRRILHGDVKAD 179
Query: 606 NVLLGND-MEPKIGDFG 621
NVLL +D + DFG
Sbjct: 180 NVLLSSDGSRAALCDFG 196
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 66/187 (35%), Gaps = 57/187 (30%)
Query: 531 PNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK------IAKG 584
P L ++ + +D + ++V G L H+ R K A
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMY-----------HIQQVGRFKEPHAVFYAAE 129
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGL--ERLVTGDTSSSKAGGSARNF 642
+A GL FL K ++ +LK NV+L ++ KI DFG+ E + G T+ G
Sbjct: 130 IAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTP---- 185
Query: 643 GSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVIL 702
Y APE + D ++FGV+L
Sbjct: 186 ----------------------------------DYIAPEIIAYQPYGKSVDWWAFGVLL 211
Query: 703 LELLTGK 709
E+L G+
Sbjct: 212 YEMLAGQ 218
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 62/139 (44%), Gaps = 12/139 (8%)
Query: 497 EDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553
E G A++ + + V + + E + R++ + P LV++ + ++ ++V
Sbjct: 85 ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 144
Query: 554 PNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN 611
G + + R++G P AR A+ + +LH ++ +LKP N+L+
Sbjct: 145 AGGEMF-SHLRRIGRFXEP-----HARFYAAQ-IVLTFEYLHSLDLIYRDLKPENLLIDQ 197
Query: 612 DMEPKIGDFGLERLVTGDT 630
++ DFG + V G T
Sbjct: 198 QGYIQVTDFGFAKRVKGRT 216
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 26/137 (18%)
Query: 506 RIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGF--------------YWGVDEKL- 547
R+G S V R +D +T + K V + R+ Y V E
Sbjct: 81 RVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPW 140
Query: 548 --IIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPR 605
I + + GSL ++MG LP + L GL +LH ++ +HG++K
Sbjct: 141 VNIFMELLEGGSLGQL-IKQMGC----LPEDRALYYLGQALEGLEYLHTRRILHGDVKAD 195
Query: 606 NVLLGND-MEPKIGDFG 621
NVLL +D + DFG
Sbjct: 196 NVLLSSDGSRAALCDFG 212
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 62/140 (44%), Gaps = 7/140 (5%)
Query: 484 GASGS-SIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
GA+G + V E+ A+ + + + +VD + + ++ + L H N+V+ G
Sbjct: 17 GAAGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 75
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ + + ++ G L + +G +P + + G+ +LH H ++
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 603 KPRNVLLGNDMEPKIGDFGL 622
KP N+LL KI DFGL
Sbjct: 131 KPENLLLDERDNLKISDFGL 150
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 484 GASGS-SIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
GA G + V E+ A+ + + + +VD + + ++ + L H N+V+ G
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 76
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ + + ++ G L + +G +P + + G+ +LH H ++
Sbjct: 77 GNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 603 KPRNVLLGNDMEPKIGDFGL 622
KP N+LL KI DFGL
Sbjct: 132 KPENLLLDERDNLKISDFGL 151
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 484 GASGS-SIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
GA G + V E+ A+ + + + +VD + + ++ + L H N+V+ G
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 75
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ + + ++ G L + +G +P + + G+ +LH H ++
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 603 KPRNVLLGNDMEPKIGDFGL 622
KP N+LL KI DFGL
Sbjct: 131 KPENLLLDERDNLKISDFGL 150
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 52 GSFGRVMLVKHK-ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++V G + + R++G P AR A+ + +LH +
Sbjct: 111 KDNSNLYMVMEYVAGGEMF-SHLRRIGRFXEP-----HARFYAAQ-IVLTFEYLHSLDLI 163
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ ++ DFG + V G T
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 52 GSFGRVMLVKHK-ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++V G + + R++G P AR A+ + +LH +
Sbjct: 111 KDNSNLYMVMEYVAGGEMF-SHLRRIGRFXEP-----HARFYAAQ-IVLTFEYLHSLDLI 163
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ ++ DFG + V G T
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFE---TQVRVIAKLVHPNLVRIRGFY 540
G+ G ++ K E G A++ + + V + + E + R++ + P LV++ +
Sbjct: 47 GSFGRVMLVKHK-ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 105
Query: 541 WGVDEKLIIYDFVPNGSLANARYRKMG--SSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598
++ ++V G + + R++G P AR A+ + +LH +
Sbjct: 106 KDNSNLYMVMEYVAGGEMF-SHLRRIGRFXEP-----HARFYAAQ-IVLTFEYLHSLDLI 158
Query: 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
+ +LKP N+L+ ++ DFG + V G T
Sbjct: 159 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 190
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 19/113 (16%)
Query: 521 QVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK 580
+V ++ +L H N++ ++ +I+++ N + M +P + ++
Sbjct: 83 EVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEND-----LKKYMDKNP-----DVSMR 132
Query: 581 IAKG----VARGLAFLHEKKHVHGNLKPRNVLLG-NDMEP----KIGDFGLER 624
+ K + G+ F H ++ +H +LKP+N+LL +D KIGDFGL R
Sbjct: 133 VIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 46/146 (31%)
Query: 573 LPWE-ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFG--LERLVTGD 629
LP E AR +A+ V + +H+ +VH ++KP N+L+ + ++ DFG L+ + G
Sbjct: 172 LPEEMARFYLAEMVI-AIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 230
Query: 630 TSSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSI-- 687
SS A G+ Y +PE L+++
Sbjct: 231 VQSSVAVGTP-------------------------------------DYISPEILQAMEG 253
Query: 688 ---KPNPKWDVYSFGVILLELLTGKV 710
+ P+ D +S GV + E+L G+
Sbjct: 254 GKGRYGPECDWWSLGVCMYEMLYGET 279
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 66/188 (35%), Gaps = 57/188 (30%)
Query: 531 PNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLK------IAKG 584
P L ++ + +D + ++V G L H+ R K A
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMY-----------HIQQVGRFKEPHAVFYAAE 450
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGL--ERLVTGDTSSSKAGGSARNF 642
+A GL FL K ++ +LK NV+L ++ KI DFG+ E + G T+ G
Sbjct: 451 IAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCG------ 504
Query: 643 GSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVIL 702
Y APE + D ++FGV+L
Sbjct: 505 --------------------------------TPDYIAPEIIAYQPYGKSVDWWAFGVLL 532
Query: 703 LELLTGKV 710
E+L G+
Sbjct: 533 YEMLAGQA 540
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 46/147 (31%)
Query: 579 LKIAKGVARGLAFLH--------EKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
L++A A GLA LH + H + K RNVL+ ++++ I D GL + + +
Sbjct: 108 LRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGS 167
Query: 631 SSSKAGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESL-RSIKP 689
G + R G+KR Y APE L I+
Sbjct: 168 DYLDIGNNPR-VGTKR-------------------------------YMAPEVLDEQIRT 195
Query: 690 NP----KW-DVYSFGVILLELLTGKVI 711
+ KW D+++FG++L E+ ++
Sbjct: 196 DCFESYKWTDIWAFGLVLWEIARRTIV 222
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Query: 579 LKIAKGVARGLAFLH--------EKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
L+I +A GLA LH + H +LK +N+L+ + + I D GL + + T
Sbjct: 108 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 167
Query: 631 SSSKAGGSARNFGSKRSTA 649
+ G + R G+KR A
Sbjct: 168 NQLDVGNNPR-VGTKRYMA 185
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Query: 579 LKIAKGVARGLAFLH--------EKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
L+I +A GLA LH + H +LK +N+L+ + + I D GL + + T
Sbjct: 108 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 167
Query: 631 SSSKAGGSARNFGSKRSTA 649
+ G + R G+KR A
Sbjct: 168 NQLDVGNNPR-VGTKRYMA 185
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 9/79 (11%)
Query: 579 LKIAKGVARGLAFLH--------EKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630
L+I +A GLA LH + H +LK +N+L+ + + I D GL + + T
Sbjct: 137 LRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST 196
Query: 631 SSSKAGGSARNFGSKRSTA 649
+ G + R G+KR A
Sbjct: 197 NQLDVGNNPR-VGTKRYMA 214
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Query: 563 YRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHV-HGNLKPRNVLLGNDMEPKIGDFG 621
Y+++ +P + KIA + + L LH K V H ++KP NVL+ + K+ DFG
Sbjct: 140 YKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFG 199
Query: 622 LERLVTGDTSSSKAGGSARNFGSKR 646
+ + + + G +R
Sbjct: 200 ISGYLVDSVAKTIDAGCKPYMAPER 224
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
Query: 518 FETQVRVIAKLVHPNLVRIRGFYWGVDEKLI--IYDFVPNGSLANARYRKMGSSPCHLPW 575
F + ++A P +V++ FY D++ + + +++P G L N M + W
Sbjct: 121 FWEERDIMAFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNL----MSNYDVPEKW 174
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFG 621
AR A+ V L +H +H ++KP N+LL K+ DFG
Sbjct: 175 -ARFYTAE-VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG 218
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 64/172 (37%), Gaps = 30/172 (17%)
Query: 64 CSWNGVTCASPGEGNND-SRVIGLA----LPNSQLLGSIPAD--LGMIEFLQYLDXXXXX 116
C G T G G + R I L L N LG I +D G + L L+
Sbjct: 6 CHCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQ 65
Query: 117 XXXXXXXXXXXXXQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTL 176
++ L L N I + LH L+ LNL DN ++ +P S L
Sbjct: 66 LTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHL 125
Query: 177 QSLTIVSLKNN---------YFSD--------------GLPSKFNSVQVLDL 205
SLT ++L +N +F++ G PSK VQ+ DL
Sbjct: 126 NSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSKVRDVQIKDL 177
Score = 29.6 bits (65), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 3/85 (3%)
Query: 130 QLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYF 189
L L+L N ++G P ++Q L L +N + L L ++L +N
Sbjct: 55 HLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQI 114
Query: 190 SDGLPSKF---NSVQVLDLSSNLIN 211
S +P F NS+ L+L+SN N
Sbjct: 115 SCVMPGSFEHLNSLTSLNLASNPFN 139
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 26/137 (18%)
Query: 506 RIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGF--------------YWGVDEKL- 547
R+G S V R +D +T + K V + R+ Y V E
Sbjct: 79 RLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPW 138
Query: 548 --IIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPR 605
I + + GSL ++MG LP + L GL +LH ++ +HG++K
Sbjct: 139 VNIFMELLEGGSLGQL-IKQMGC----LPEDRALYYLGQALEGLEYLHTRRILHGDVKAD 193
Query: 606 NVLLGND-MEPKIGDFG 621
NVLL +D + DFG
Sbjct: 194 NVLLSSDGSRAALCDFG 210
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
Query: 518 FETQVRVIAKLVHPNLVRIRGFYWGVDEKLI--IYDFVPNGSLANARYRKMGSSPCHLPW 575
F + ++A P +V++ FY D++ + + +++P G L N M + W
Sbjct: 116 FWEERDIMAFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNL----MSNYDVPEKW 169
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFG 621
AR A+ V L +H +H ++KP N+LL K+ DFG
Sbjct: 170 -ARFYTAE-VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG 213
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 10/106 (9%)
Query: 518 FETQVRVIAKLVHPNLVRIRGFYWGVDEKLI--IYDFVPNGSLANARYRKMGSSPCHLPW 575
F + ++A P +V++ FY D++ + + +++P G L N M + W
Sbjct: 121 FWEERDIMAFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNL----MSNYDVPEKW 174
Query: 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFG 621
AR A+ V L +H +H ++KP N+LL K+ DFG
Sbjct: 175 -ARFYTAE-VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG 218
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 10/139 (7%)
Query: 132 RNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPV----SLTTLQSLTIVSLKNN 187
+ LDL +N +S + L L+LL L+DN L LP L L++L + K
Sbjct: 40 KKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQT-LPAGIFKELKNLETLWVTDNKLQ 98
Query: 188 YFSDGLPSKFNSVQVLDLSSNLINGSLPPDI--GGYSLRYLNLSYNRLSGEIPPQFGEKI 245
G+ + ++ L L N + SLPP + L YL+L YN L +P +K+
Sbjct: 99 ALPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYNELQS-LPKGVFDKL 156
Query: 246 PVNATIDLSFNNLTGEIPE 264
+ L +NN +PE
Sbjct: 157 TSLKELRL-YNNQLKRVPE 174
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 484 GASGS-SIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
GA G + V E+ A+ + + + +VD + + ++ + L H N+V+ G
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEIXINKMLNHENVVKFYGHRRE 75
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ + + ++ G L + +G +P + + G+ +LH H ++
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 603 KPRNVLLGNDMEPKIGDFGL 622
KP N+LL KI DFGL
Sbjct: 131 KPENLLLDERDNLKISDFGL 150
>pdb|2JII|A Chain A, Structure Of Vaccinia Related Kinase 3
pdb|2JII|B Chain B, Structure Of Vaccinia Related Kinase 3
Length = 352
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 550 YDFVPNGSLANARYRKMGSSPCHLPWE-ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVL 608
Y F+ SL + + SP H+ E + L++A + L FLHE ++VHGN+ N+
Sbjct: 132 YRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIF 191
Query: 609 L 609
+
Sbjct: 192 V 192
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 7/122 (5%)
Query: 501 ALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG--VDEKLIIYDFVPNGSL 558
+ V ++ + S + RDF + + HPN++ + G +I ++P GSL
Sbjct: 37 VVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSL 96
Query: 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLH--EKKHVHGNLKPRNVLLGNDMEPK 616
N + + +K A +ARG+AFLH E L R+V++ DM +
Sbjct: 97 YNVLHEGTNFV---VDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTAR 153
Query: 617 IG 618
I
Sbjct: 154 IS 155
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 484 GASGS-SIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
GA G + V E+ A+ + + + +VD + + ++ + L H N+V+ G
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 76
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ + + ++ G L + +G +P + + G+ +LH H ++
Sbjct: 77 GNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 603 KPRNVLLGNDMEPKIGDFGL 622
KP N+LL KI DFGL
Sbjct: 132 KPENLLLDERDNLKISDFGL 151
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 484 GASGS-SIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
GA G + V E+ A+ + + + +VD + + ++ + L H N+V+ G
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 76
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ + + ++ G L + +G +P + + G+ +LH H ++
Sbjct: 77 GNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 603 KPRNVLLGNDMEPKIGDFGL 622
KP N+LL KI DFGL
Sbjct: 132 KPENLLLDERDNLKISDFGL 151
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 484 GASGS-SIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
GA G + V E+ A+ + + + +VD + + ++ + L H N+V+ G
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 76
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ + + ++ G L + +G +P + + G+ +LH H ++
Sbjct: 77 GNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 603 KPRNVLLGNDMEPKIGDFGL 622
KP N+LL KI DFGL
Sbjct: 132 KPENLLLDERDNLKISDFGL 151
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 484 GASGS-SIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
GA G + V E+ A+ + + + +VD + + ++ + L H N+V+ G
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEIXINKMLNHENVVKFYGHRRE 75
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ + + ++ G L + +G +P + + G+ +LH H ++
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 603 KPRNVLLGNDMEPKIGDFGL 622
KP N+LL KI DFGL
Sbjct: 131 KPENLLLDERDNLKISDFGL 150
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 79/228 (34%), Gaps = 50/228 (21%)
Query: 487 GSSIMYKAVLEDGT--ALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVD 544
GS + K + T AV+ I ++ D + E +R HPN++ ++ Y
Sbjct: 33 GSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYGQ---HPNIITLKDVYDDGK 89
Query: 545 EKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKP 604
++ + G L + R+ S + + + + +LH + VH +LKP
Sbjct: 90 YVYVVTELXKGGELLDKILRQKFFSE-----REASAVLFTITKTVEYLHAQGVVHRDLKP 144
Query: 605 RNVLL----GNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLXXX 660
N+L GN +I DFG + + + NF
Sbjct: 145 SNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFV----------------- 187
Query: 661 XXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGVILLELLTG 708
APE L + D++S GV+L LTG
Sbjct: 188 -------------------APEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 484 GASGS-SIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
GA G + V E+ A+ + + + +VD + + ++ + L H N+V+ G
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEIXINKMLNHENVVKFYGHRRE 76
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ + + ++ G L + +G +P + + G+ +LH H ++
Sbjct: 77 GNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 603 KPRNVLLGNDMEPKIGDFGL 622
KP N+LL KI DFGL
Sbjct: 132 KPENLLLDERDNLKISDFGL 151
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 484 GASGS-SIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
GA G + V E+ A+ + + + +VD + + ++ + L H N+V+ G
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 75
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ + + ++ G L + +G +P + + G+ +LH H ++
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 603 KPRNVLLGNDMEPKIGDFGL 622
KP N+LL KI DFGL
Sbjct: 131 KPENLLLDERDNLKISDFGL 150
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 484 GASGS-SIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
GA G + V E+ A+ + + + +VD + + ++ + L H N+V+ G
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 76
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ + + ++ G L + +G +P + + G+ +LH H ++
Sbjct: 77 GNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 603 KPRNVLLGNDMEPKIGDFGL 622
KP N+LL KI DFGL
Sbjct: 132 KPENLLLDERDNLKISDFGL 151
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 484 GASGS-SIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
GA G + V E+ A+ + + + +VD + + ++ + L H N+V+ G
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 75
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ + + ++ G L + +G +P + + G+ +LH H ++
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 603 KPRNVLLGNDMEPKIGDFGL 622
KP N+LL KI DFGL
Sbjct: 131 KPENLLLDERDNLKISDFGL 150
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 484 GASGS-SIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
GA G + V E+ A+ + + + +VD + + ++ + L H N+V+ G
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 75
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ + + ++ G L + +G +P + + G+ +LH H ++
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 603 KPRNVLLGNDMEPKIGDFGL 622
KP N+LL KI DFGL
Sbjct: 131 KPENLLLDERDNLKISDFGL 150
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 484 GASGS-SIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
GA G + V E+ A+ + + + +VD + + ++ + L H N+V+ G
Sbjct: 16 GAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 74
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ + + ++ G L + +G +P + + G+ +LH H ++
Sbjct: 75 GNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 129
Query: 603 KPRNVLLGNDMEPKIGDFGL 622
KP N+LL KI DFGL
Sbjct: 130 KPENLLLDERDNLKISDFGL 149
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 46/129 (35%), Gaps = 37/129 (28%)
Query: 580 KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639
K A + + L LH+ + +H +LKP N+LL ++G
Sbjct: 204 KFAHSILQCLDALHKNRIIHCDLKPENILL--------------------KQQGRSGIKV 243
Query: 640 RNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFG 699
+FGS R Y APE + + D++S G
Sbjct: 244 IDFGSSCYEHQR-----------------VYTXIQSRFYRAPEVILGARYGMPIDMWSLG 286
Query: 700 VILLELLTG 708
IL ELLTG
Sbjct: 287 CILAELLTG 295
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 484 GASGS-SIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
GA G + V E+ A+ + + + +VD + + ++ + L H N+V+ G
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 75
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ + + ++ G L + +G +P + + G+ +LH H ++
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 603 KPRNVLLGNDMEPKIGDFGL 622
KP N+LL KI DFGL
Sbjct: 131 KPENLLLDERDNLKISDFGL 150
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 484 GASGS-SIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
GA G + V E+ A+ + + + +VD + + ++ + L H N+V+ G
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 75
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ + + ++ G L + +G +P + + G+ +LH H ++
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 603 KPRNVLLGNDMEPKIGDFGL 622
KP N+LL KI DFGL
Sbjct: 131 KPENLLLDERDNLKISDFGL 150
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 484 GASGS-SIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
GA G + V E+ A+ + + + +VD + + ++ + L H N+V+ G
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 75
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ + + ++ G L + +G +P + + G+ +LH H ++
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 603 KPRNVLLGNDMEPKIGDFGL 622
KP N+LL KI DFGL
Sbjct: 131 KPENLLLDERDNLKISDFGL 150
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 484 GASGS-SIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
GA G + V E+ A+ + + + +VD + + ++ + L H N+V+ G
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 76
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ + + ++ G L + +G +P + + G+ +LH H ++
Sbjct: 77 GNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 131
Query: 603 KPRNVLLGNDMEPKIGDFGL 622
KP N+LL KI DFGL
Sbjct: 132 KPENLLLDERDNLKISDFGL 151
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLG--NDMEP-KIGDFGL 622
+ + VA L FLH K H +LKP N+L N + P KI DF L
Sbjct: 116 VVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDL 160
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 14/67 (20%)
Query: 579 LKIAKGVARGLAFLHEKKHVHGNLKPRNVLL-------------GNDMEPKIGDFGL-ER 624
+ + + +A G+A LH K +H +LKP+N+L+ ++ I DFGL ++
Sbjct: 118 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK 177
Query: 625 LVTGDTS 631
L +G +S
Sbjct: 178 LDSGQSS 184
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 46/129 (35%), Gaps = 37/129 (28%)
Query: 580 KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639
K A + + L LH+ + +H +LKP N+LL ++G
Sbjct: 204 KFAHSILQCLDALHKNRIIHCDLKPENILL--------------------KQQGRSGIKV 243
Query: 640 RNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFG 699
+FGS R Y APE + + D++S G
Sbjct: 244 IDFGSSCYEHQR-----------------VYTXIQSRFYRAPEVILGARYGMPIDMWSLG 286
Query: 700 VILLELLTG 708
IL ELLTG
Sbjct: 287 CILAELLTG 295
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 484 GASGS-SIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
GA G + V E+ A+ + + + +VD + + ++ + L H N+V+ G
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 75
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ + + ++ G L + +G +P + + G+ +LH H ++
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 603 KPRNVLLGNDMEPKIGDFGL 622
KP N+LL KI DFGL
Sbjct: 131 KPENLLLDERDNLKISDFGL 150
>pdb|3DZO|A Chain A, Crystal Structure Of A Rhoptry Kinase From Toxoplasma
Gondii
Length = 413
Score = 33.9 bits (76), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636
ARL++ V R LA LH VH L+P +++L D + G E LV S+
Sbjct: 212 ARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL--DQRGGVFLTGFEHLVRDGASAVSPI 269
Query: 637 GSARNFGSKRSTASR 651
G R F +TA R
Sbjct: 270 G--RGFAPPETTAER 282
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 582 AKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLV-TGDTSSSKAG 636
A + GL LH ++ V+ +LKP N+LL + +I D GL V G T + G
Sbjct: 292 AAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVG 347
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 11/126 (8%)
Query: 497 EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556
+ G AV+++ ++ FR E + A L P +V + G I + + G
Sbjct: 116 QTGFQCAVKKV---RLEVFRAEE--LMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGG 170
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGND-MEP 615
SL ++ G LP + L GL +LH ++ +HG++K NVLL +D
Sbjct: 171 SLGQL-VKEQGC----LPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHA 225
Query: 616 KIGDFG 621
+ DFG
Sbjct: 226 ALCDFG 231
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 47/129 (36%), Gaps = 37/129 (28%)
Query: 580 KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639
K A + + L LH+ + +H +LKP N+LL ++G
Sbjct: 204 KFAHSILQCLDALHKNRIIHCDLKPENILL--------------------KQQGRSGIKV 243
Query: 640 RNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFG 699
+FGS R Y APE + + D++S G
Sbjct: 244 IDFGSSCYEHQR-----------------VYXXIQSRFYRAPEVILGARYGMPIDMWSLG 286
Query: 700 VILLELLTG 708
IL ELLTG
Sbjct: 287 CILAELLTG 295
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 582 AKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLV-TGDTSSSKAG 636
A + GL LH ++ V+ +LKP N+LL + +I D GL V G T + G
Sbjct: 292 AAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVG 347
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 7/140 (5%)
Query: 484 GASGS-SIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542
GA G + V E+ A+ + + + +VD + + ++ + L H N+V+ G
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDM-KRAVDCPENIKKEICINKMLNHENVVKFYGHRRE 75
Query: 543 VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL 602
+ + + ++ G L + +G +P + + G+ +LH H ++
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIG-----MPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 603 KPRNVLLGNDMEPKIGDFGL 622
KP N+LL KI DFGL
Sbjct: 131 KPENLLLDERDNLKISDFGL 150
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 33.5 bits (75), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 11/126 (8%)
Query: 497 EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556
+ G AV+++ ++ FR E + A L P +V + G I + + G
Sbjct: 97 QTGFQCAVKKV---RLEVFRAEE--LMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGG 151
Query: 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGND-MEP 615
SL ++ G LP + L GL +LH ++ +HG++K NVLL +D
Sbjct: 152 SLGQL-VKEQGC----LPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHA 206
Query: 616 KIGDFG 621
+ DFG
Sbjct: 207 ALCDFG 212
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 33.1 bits (74), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 56/140 (40%), Gaps = 45/140 (32%)
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFG--LERLVTGDTSSSK 634
AR I + V + +H+ +VH ++KP NVLL + ++ DFG L+ G SS
Sbjct: 177 ARFYIGEMVL-AIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSV 235
Query: 635 AGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSI-----KP 689
A G+ Y +PE L+++ K
Sbjct: 236 AVGTP-------------------------------------DYISPEILQAMEDGMGKY 258
Query: 690 NPKWDVYSFGVILLELLTGK 709
P+ D +S GV + E+L G+
Sbjct: 259 GPECDWWSLGVCMYEMLYGE 278
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 33.1 bits (74), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Query: 589 LAFLHEKKHVHGNLKPRNVLLG--NDMEPKIGDFGL 622
L ++HE ++VHG++K N+LLG N + + D+GL
Sbjct: 164 LEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGL 199
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 33.1 bits (74), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 56/141 (39%), Gaps = 45/141 (31%)
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFG--LERLVTGDTSSSK 634
AR I + V + +H+ +VH ++KP NVLL + ++ DFG L+ G SS
Sbjct: 193 ARFYIGEMVL-AIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSV 251
Query: 635 AGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSI-----KP 689
A G+ Y +PE L+++ K
Sbjct: 252 AVGTP-------------------------------------DYISPEILQAMEDGMGKY 274
Query: 690 NPKWDVYSFGVILLELLTGKV 710
P+ D +S GV + E+L G+
Sbjct: 275 GPECDWWSLGVCMYEMLYGET 295
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 16/118 (13%)
Query: 133 NLDLSNNLISGHLPETMGSLHNLQLLNLSDNALA--GKLPVSLTTLQSLTIVSLKNNYFS 190
+LD SNNL++ + E G L L+ L L N L K+ T ++SL + + N S
Sbjct: 328 HLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVS 387
Query: 191 ----DGLPSKFNSVQVLDLSSNLINGS----LPPDIGGYSLRYLNLSYNRLSGEIPPQ 240
G S S+ L++SSN++ + LPP I + L+L N++ IP Q
Sbjct: 388 YDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLPPRI-----KVLDLHSNKIKS-IPKQ 439
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 32.7 bits (73), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 13/57 (22%)
Query: 579 LKIAKGVARGLAFLHEKKHVHGNLKPRNVLL-------------GNDMEPKIGDFGL 622
+ + + +A G+A LH K +H +LKP+N+L+ ++ I DFGL
Sbjct: 118 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 32.7 bits (73), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 67/190 (35%), Gaps = 40/190 (21%)
Query: 519 ETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEAR 578
+ + R +L P++V I F +D +L + + NG A R+ G P P
Sbjct: 82 QREARTAGRLQEPHVVPIHDF-GEIDGQLYVDXRLINGVDLAAXLRRQG--PLAPPRA-- 136
Query: 579 LKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638
+ I + + L H H ++KP N+L+ D + DFG+ T D ++ G +
Sbjct: 137 VAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATT-DEKLTQLGNT 195
Query: 639 ARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSF 698
Y APE + D+Y+
Sbjct: 196 VGTL----------------------------------YYXAPERFSESHATYRADIYAL 221
Query: 699 GVILLELLTG 708
+L E LTG
Sbjct: 222 TCVLYECLTG 231
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 17/111 (15%)
Query: 134 LDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTT-----LQSLTIVSLK--N 186
L+ + N+ + + + +L LQ L L N L V+L T L++L VSL N
Sbjct: 358 LNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLD-VSLNSLN 416
Query: 187 NYFSDGLPSKFNSVQVLDLSSNLINGS----LPPDIGGYSLRYLNLSYNRL 233
++ D + S+ VL+LSSN++ GS LPP + + L+L NR+
Sbjct: 417 SHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKV-----KVLDLHNNRI 462
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/97 (20%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Query: 530 HPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGL 589
H N++ + + ++E ++I++F+ + + ++ +S L + V L
Sbjct: 60 HRNILHLHESFESMEELVMIFEFISGLDI----FERINTSAFELNEREIVSYVHQVCEAL 115
Query: 590 AFLHEKKHVHGNLKPRNVLLGNDMEP--KIGDFGLER 624
FLH H +++P N++ KI +FG R
Sbjct: 116 QFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQAR 152
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 47/134 (35%), Gaps = 30/134 (22%)
Query: 580 KIAKGVARGLAFLHEKKHVHGNLKPRNVLL-----GNDMEPKIGDFGLERLVTGDTSSSK 634
K+A + + + FLH K H +LKP N+L PKI ER +
Sbjct: 122 KMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIK--RDERTLINPDIKVV 179
Query: 635 AGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWD 694
GSA ST Y APE + ++ + D
Sbjct: 180 DFGSATYDDEHHSTL-----------------------VSTRHYRAPEVILALGWSQPCD 216
Query: 695 VYSFGVILLELLTG 708
V+S G IL+E G
Sbjct: 217 VWSIGCILIEYYLG 230
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 13/57 (22%)
Query: 579 LKIAKGVARGLAFLHEKKHVHGNLKPRNVLL-------------GNDMEPKIGDFGL 622
+ + + +A G+A LH K +H +LKP+N+L+ ++ I DFGL
Sbjct: 136 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 13/57 (22%)
Query: 579 LKIAKGVARGLAFLHEKKHVHGNLKPRNVLL-------------GNDMEPKIGDFGL 622
+ + + +A G+A LH K +H +LKP+N+L+ ++ I DFGL
Sbjct: 136 ISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 49/134 (36%), Gaps = 30/134 (22%)
Query: 580 KIAKGVARGLAFLHEKKHVHGNLKPRNVLL-----GNDMEPKIGDFGLERLVTGDTSSSK 634
K+A + + + FLH K H +LKP N+L PKI ER +
Sbjct: 122 KMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIK--RDERTLINPDIKVV 179
Query: 635 AGGSARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWD 694
GSA ST Y APE + ++ + D
Sbjct: 180 DFGSATYDDEHHSTL-----------------------VXXRHYRAPEVILALGWSQPCD 216
Query: 695 VYSFGVILLELLTG 708
V+S G IL+E G
Sbjct: 217 VWSIGCILIEYYLG 230
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 45/128 (35%), Gaps = 39/128 (30%)
Query: 582 AKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARN 641
A + GL +H + V+ +LKP N+LL +I D GL D S K S
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGL----ACDFSKKKPHASVGT 353
Query: 642 FGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESL-RSIKPNPKWDVYSFGV 700
G Y APE L + + + D +S G
Sbjct: 354 HG----------------------------------YMAPEVLQKGVAYDSSADWFSLGC 379
Query: 701 ILLELLTG 708
+L +LL G
Sbjct: 380 MLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 45/128 (35%), Gaps = 39/128 (30%)
Query: 582 AKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARN 641
A + GL +H + V+ +LKP N+LL +I D GL D S K S
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGL----ACDFSKKKPHASVGT 353
Query: 642 FGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESL-RSIKPNPKWDVYSFGV 700
G Y APE L + + + D +S G
Sbjct: 354 HG----------------------------------YMAPEVLQKGVAYDSSADWFSLGC 379
Query: 701 ILLELLTG 708
+L +LL G
Sbjct: 380 MLFKLLRG 387
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 44/130 (33%), Gaps = 24/130 (18%)
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGN-DMEPKIGDF-GLERLVTGDTSSSKAGGS 638
+A + L FLHE + H +LKP N+L N + E + E +TS A
Sbjct: 128 MAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG 187
Query: 639 ARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSF 698
+ F + T Y PE + + DV+S
Sbjct: 188 SATFDHEHHTT----------------------IVATRHYRPPEVILELGWAQPCDVWSI 225
Query: 699 GVILLELLTG 708
G IL E G
Sbjct: 226 GCILFEYYRG 235
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 44/130 (33%), Gaps = 24/130 (18%)
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGN-DMEPKIGDF-GLERLVTGDTSSSKAGGS 638
+A + L FLHE + H +LKP N+L N + E + E +TS A
Sbjct: 137 MAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG 196
Query: 639 ARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSF 698
+ F + T Y PE + + DV+S
Sbjct: 197 SATFDHEHHTT----------------------IVATRHYRPPEVILELGWAQPCDVWSI 234
Query: 699 GVILLELLTG 708
G IL E G
Sbjct: 235 GCILFEYYRG 244
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 44/130 (33%), Gaps = 24/130 (18%)
Query: 581 IAKGVARGLAFLHEKKHVHGNLKPRNVLLGN-DMEPKIGDF-GLERLVTGDTSSSKAGGS 638
+A + L FLHE + H +LKP N+L N + E + E +TS A
Sbjct: 160 MAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFG 219
Query: 639 ARNFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSF 698
+ F + T Y PE + + DV+S
Sbjct: 220 SATFDHEHHTT----------------------IVATRHYRPPEVILELGWAQPCDVWSI 257
Query: 699 GVILLELLTG 708
G IL E G
Sbjct: 258 GCILFEYYRG 267
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 45/128 (35%), Gaps = 39/128 (30%)
Query: 582 AKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARN 641
A + GL +H + V+ +LKP N+LL +I D GL D S K S
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGL----ACDFSKKKPHASVGT 353
Query: 642 FGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESL-RSIKPNPKWDVYSFGV 700
G Y APE L + + + D +S G
Sbjct: 354 HG----------------------------------YMAPEVLQKGVAYDSSADWFSLGC 379
Query: 701 ILLELLTG 708
+L +LL G
Sbjct: 380 MLFKLLRG 387
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 45/128 (35%), Gaps = 39/128 (30%)
Query: 582 AKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARN 641
A + GL +H + V+ +LKP N+LL +I D GL D S K S
Sbjct: 297 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGL----ACDFSKKKPHASVGT 352
Query: 642 FGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESL-RSIKPNPKWDVYSFGV 700
G Y APE L + + + D +S G
Sbjct: 353 HG----------------------------------YMAPEVLQKGVAYDSSADWFSLGC 378
Query: 701 ILLELLTG 708
+L +LL G
Sbjct: 379 MLFKLLRG 386
>pdb|3OJA|A Chain A, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 487
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 131 LRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPV-SLTTLQSLTIVSLKNNYF 189
++ LDLS N +S + L+LLNLS N L L + SL+TL++L L NNY
Sbjct: 36 VKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLDLESLSTLRTL---DLNNNYV 92
Query: 190 SDGL 193
+ L
Sbjct: 93 QELL 96
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 70/169 (41%), Gaps = 39/169 (23%)
Query: 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVI-----------AKLVHPN 532
GA GS+I VL++ ++ R GE ++R E V++ A++
Sbjct: 1 GAMGSTIARTIVLQE--SIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTV 58
Query: 533 LVR---IRGFYWGVDEK--------LIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKI 581
++R I GF D K ++ D+ +GSL + R + E +K+
Sbjct: 59 MLRHENILGFI-AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV------EGMIKL 111
Query: 582 AKGVARGLAFLHEK--------KHVHGNLKPRNVLLGNDMEPKIGDFGL 622
A A GLA LH + H +LK +N+L+ + I D GL
Sbjct: 112 ALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 160
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 12/107 (11%)
Query: 531 PNLVRI----RGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVA 586
P++VRI Y G LI+ + + G L +R + G EA +I K +
Sbjct: 71 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELF-SRIQDRGDQ-AFTEREAS-EIMKSIG 127
Query: 587 RGLAFLHEKKHVHGNLKPRNVLLGNDMEP----KIGDFGLERLVTGD 629
+ +LH H ++KP N LL P K+ DFG + TG+
Sbjct: 128 EAIQYLHSINIAHRDVKPEN-LLYTSKRPNAILKLTDFGFAKETTGE 173
>pdb|3O53|A Chain A, Crystal Structure Of Lrim1 Leucine-Rich Repeat Domain
pdb|3O53|B Chain B, Crystal Structure Of Lrim1 Leucine-Rich Repeat Domain
Length = 317
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 131 LRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFS 190
++ LDLS N +S + L+LLNLS N L L L +L +L + L NNY
Sbjct: 36 VKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETL--DLESLSTLRTLDLNNNYVQ 93
Query: 191 DGL 193
+ L
Sbjct: 94 ELL 96
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 548 IIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNV 607
++ +++P G L N M + W A+ A+ V L +H +H ++KP N+
Sbjct: 152 MVMEYMPGGDLVNL----MSNYDVPEKW-AKFYTAE-VVLALDAIHSMGLIHRDVKPDNM 205
Query: 608 LLGNDMEPKIGDFG 621
LL K+ DFG
Sbjct: 206 LLDKHGHLKLADFG 219
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 52/131 (39%), Gaps = 22/131 (16%)
Query: 585 VARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT----SSSKAGGSAR 640
+ + L +L + H +LKP N+LL + K + R+ G + G
Sbjct: 146 ILKALNYLRKMSLTHTDLKPENILLDDPYFEK-SLITVRRVTDGKKIQIYRTKSTGIKLI 204
Query: 641 NFGSKRSTASRDSFQDLXXXXXXXXXXXXXXXXXXXXYHAPESLRSIKPNPKWDVYSFGV 700
+FG +T D + Y APE + ++ + D++SFG
Sbjct: 205 DFGC--ATFKSDYHGSIINTRQ---------------YRAPEVILNLGWDVSSDMWSFGC 247
Query: 701 ILLELLTGKVI 711
+L EL TG ++
Sbjct: 248 VLAELYTGSLL 258
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/109 (20%), Positives = 46/109 (42%), Gaps = 4/109 (3%)
Query: 517 DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWE 576
D + + + L HP++V + Y ++++F+ L ++ + +
Sbjct: 74 DLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAV 133
Query: 577 ARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLG---NDMEPKIGDFGL 622
A + + L + H+ +H ++KP VLL N K+G FG+
Sbjct: 134 AS-HYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGV 181
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 30/153 (19%), Positives = 63/153 (41%), Gaps = 16/153 (10%)
Query: 482 ILGASGSSIMYKAV-LEDGTALAVRRIGENSVDRF--------RDFETQVRVIAKLVHPN 532
++G S++ + + E G AV+ + V +F D + + + L HP+
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIV---DVAKFTSSPGLSTEDLKREASICHMLKHPH 87
Query: 533 LVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFL 592
+V + Y ++++F+ L ++ + + A + + L +
Sbjct: 88 IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVAS-HYMRQILEALRYC 146
Query: 593 HEKKHVHGNLKPRNVLLG---NDMEPKIGDFGL 622
H+ +H ++KP VLL N K+G FG+
Sbjct: 147 HDNNIIHRDVKPHCVLLASKENSAPVKLGGFGV 179
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 588 GLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFG----LERLVTGDTSSSKAGGSA 639
GL +LH + VH ++KP N+LL KI G L DT + G A
Sbjct: 121 GLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPA 176
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 30.0 bits (66), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Query: 589 LAFLHEKKHVHGNLKPRNVLLG--NDMEPKIGDFGL 622
L ++HE ++VHG++K N+LL N + + D+GL
Sbjct: 165 LEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGL 200
>pdb|2FYH|A Chain A, Solution Structure Of The 2'-5' Rna Ligase-Like Protein
From Pyrococcus Furiosus
Length = 190
Score = 29.6 bits (65), Expect = 6.4, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 55/120 (45%), Gaps = 11/120 (9%)
Query: 466 GDKELELETLLKASAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVI 525
G KE +++ + + + +I ++ + + + A +++I E +++ E VR I
Sbjct: 25 GSKEAKIKFVERENFHI------TLKFLGEITEEQAEEIKKILEKIAKKYKKHEVNVRGI 78
Query: 526 AKLVHPNLVRIRGFYWGVDEKLIIYDFVP--NGSLANARYRKMGSSPCHLPWEARLKIAK 583
+PN VR+ + GV+ II + LA ++K G+ H+ R+K K
Sbjct: 79 GVFPNPNYVRV--IWAGVENDEIIKKIAKEIDDELAKLGFKKEGNFVAHITL-GRVKFVK 135
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Query: 589 LAFLHEKKHVHGNLKPRNVLLG--NDMEPKIGDFGL 622
L ++HE ++VHG++K N+LL N + + D+GL
Sbjct: 165 LEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGL 200
>pdb|1U0N|D Chain D, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
Length = 265
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 8/56 (14%)
Query: 204 DLSSNLINGSLPPDIGGYSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLT 259
+L+ ++G+LP L L+LS+N+L P G+ +P +D+SFN LT
Sbjct: 66 ELTKLQVDGTLP------VLGTLDLSHNQLQSL--PLLGQTLPALTVLDVSFNRLT 113
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Query: 589 LAFLHEKKHVHGNLKPRNVLLG--NDMEPKIGDFGL 622
L ++HE ++VHG++K N+LL N + + D+GL
Sbjct: 165 LEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGL 200
>pdb|3T6Q|A Chain A, Crystal Structure Of Mouse Rp105MD-1 Complex
pdb|3T6Q|B Chain B, Crystal Structure Of Mouse Rp105MD-1 Complex
Length = 606
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 58/138 (42%), Gaps = 15/138 (10%)
Query: 131 LRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNY-- 188
L+ LDL+ +S LP + L L+ L LS N +S + SLT +S+K N
Sbjct: 280 LQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKR 338
Query: 189 --FSDGLPSKFNSVQVLDLSSNLINGSLPPDIGGYSLR------YLNLSYNRLSGEIPPQ 240
G +++ LDLS + I S D LR LNLSYN
Sbjct: 339 LELGTGCLENLENLRELDLSHDDIETS---DCCNLQLRNLSHLQSLNLSYNEPLSLKTEA 395
Query: 241 FGEKIPVNATIDLSFNNL 258
F E P +DL+F L
Sbjct: 396 FKE-CPQLELLDLAFTRL 412
>pdb|1M0Z|A Chain A, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
pdb|1M0Z|B Chain B, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
Length = 290
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 8/56 (14%)
Query: 204 DLSSNLINGSLPPDIGGYSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLT 259
+L+ ++G+LP L L+LS+N+L P G+ +P +D+SFN LT
Sbjct: 66 ELTKLQVDGTLP------VLGTLDLSHNQLQSL--PLLGQTLPALTVLDVSFNRLT 113
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.135 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,004,718
Number of Sequences: 62578
Number of extensions: 827600
Number of successful extensions: 3676
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 177
Number of HSP's that attempted gapping in prelim test: 1545
Number of HSP's gapped (non-prelim): 1900
length of query: 791
length of database: 14,973,337
effective HSP length: 107
effective length of query: 684
effective length of database: 8,277,491
effective search space: 5661803844
effective search space used: 5661803844
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)