Query 003847
Match_columns 791
No_of_seqs 940 out of 5652
Neff 9.0
Searched_HMMs 46136
Date Thu Mar 28 13:07:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003847.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003847hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1.4E-64 3E-69 624.5 39.3 537 80-784 403-955 (968)
2 KOG0575 Polo-like serine/threo 100.0 1.2E-47 2.5E-52 410.1 21.7 245 478-776 21-269 (592)
3 KOG1187 Serine/threonine prote 100.0 1.9E-47 4E-52 411.5 20.5 274 468-783 63-355 (361)
4 KOG0581 Mitogen-activated prot 100.0 4.8E-47 1E-51 384.2 18.6 254 470-776 76-335 (364)
5 KOG0615 Serine/threonine prote 100.0 2.1E-47 4.6E-52 388.4 14.3 243 479-775 176-436 (475)
6 KOG0595 Serine/threonine-prote 100.0 2.7E-46 5.9E-51 381.3 19.3 192 482-715 17-217 (429)
7 KOG0192 Tyrosine kinase specif 100.0 2.5E-45 5.4E-50 391.8 23.7 251 481-781 47-304 (362)
8 KOG0591 NIMA (never in mitosis 100.0 1.6E-46 3.4E-51 363.6 11.3 250 480-779 24-284 (375)
9 KOG0598 Ribosomal protein S6 k 100.0 1.8E-44 4E-49 365.4 16.6 235 480-768 30-269 (357)
10 KOG0592 3-phosphoinositide-dep 100.0 5.1E-44 1.1E-48 375.5 18.1 257 479-776 77-338 (604)
11 KOG0197 Tyrosine kinases [Sign 100.0 2.3E-44 4.9E-49 381.7 14.6 256 477-784 208-465 (468)
12 KOG0578 p21-activated serine/t 100.0 8.9E-44 1.9E-48 377.4 16.3 245 480-776 278-523 (550)
13 KOG0597 Serine-threonine prote 100.0 2.9E-43 6.3E-48 369.1 16.1 241 480-775 7-250 (808)
14 KOG0198 MEKK and related serin 100.0 5.1E-43 1.1E-47 362.4 17.4 253 479-778 21-278 (313)
15 KOG0593 Predicted protein kina 100.0 2.2E-42 4.7E-47 338.2 16.0 254 481-775 8-283 (396)
16 KOG1026 Nerve growth factor re 100.0 2.8E-42 6.1E-47 382.9 19.0 262 480-787 491-769 (774)
17 KOG0582 Ste20-like serine/thre 100.0 1.1E-41 2.4E-46 349.9 21.7 251 478-776 29-293 (516)
18 KOG0588 Serine/threonine prote 100.0 3.2E-42 6.9E-47 368.9 16.7 242 480-776 17-263 (786)
19 KOG0583 Serine/threonine prote 100.0 1.3E-41 2.9E-46 366.8 21.7 241 480-774 22-273 (370)
20 KOG0193 Serine/threonine prote 100.0 6.3E-42 1.4E-46 363.9 16.2 256 478-782 395-655 (678)
21 KOG0605 NDR and related serine 100.0 2.4E-41 5.1E-46 356.0 20.0 292 480-787 146-463 (550)
22 KOG0616 cAMP-dependent protein 100.0 1.3E-41 2.8E-46 332.4 16.3 231 480-767 49-283 (355)
23 KOG0600 Cdc2-related protein k 100.0 9E-42 1.9E-46 355.8 14.4 254 480-776 122-400 (560)
24 KOG0661 MAPK related serine/th 100.0 1.6E-41 3.5E-46 351.3 15.3 255 480-776 15-291 (538)
25 PHA02988 hypothetical protein; 100.0 1.6E-40 3.5E-45 351.6 22.7 258 468-781 13-280 (283)
26 KOG0659 Cdk activating kinase 100.0 1.6E-40 3.5E-45 320.1 17.3 257 479-776 6-281 (318)
27 cd05102 PTKc_VEGFR3 Catalytic 100.0 3.2E-40 7E-45 359.0 22.0 259 479-782 11-336 (338)
28 KOG0201 Serine/threonine prote 100.0 8.1E-42 1.8E-46 351.1 8.7 245 479-776 17-263 (467)
29 cd05571 STKc_PKB Catalytic dom 100.0 2.8E-40 6E-45 356.9 19.2 240 482-775 2-250 (323)
30 KOG0611 Predicted serine/threo 100.0 1.5E-40 3.2E-45 335.7 14.4 241 480-776 58-303 (668)
31 cd05585 STKc_YPK1_like Catalyt 100.0 6.4E-40 1.4E-44 352.3 18.9 239 483-775 1-246 (312)
32 KOG0694 Serine/threonine prote 100.0 4.8E-40 1E-44 355.5 17.4 236 480-770 373-613 (694)
33 KOG0033 Ca2+/calmodulin-depend 100.0 2.3E-41 5E-46 321.3 6.3 241 480-775 16-266 (355)
34 cd05631 STKc_GRK4 Catalytic do 100.0 2E-39 4.3E-44 343.9 21.0 248 480-776 5-261 (285)
35 KOG0585 Ca2+/calmodulin-depend 100.0 6.1E-40 1.3E-44 339.0 16.2 248 480-776 102-372 (576)
36 cd05612 STKc_PRKX_like Catalyt 100.0 1E-39 2.2E-44 347.2 18.5 240 480-776 6-254 (291)
37 cd05595 STKc_PKB_beta Catalyti 100.0 1.5E-39 3.2E-44 351.1 19.9 241 481-775 1-250 (323)
38 cd05593 STKc_PKB_gamma Catalyt 100.0 1.6E-39 3.5E-44 351.5 19.9 241 482-776 2-251 (328)
39 KOG0599 Phosphorylase kinase g 100.0 3.8E-40 8.1E-45 317.5 12.4 243 479-776 21-283 (411)
40 PTZ00263 protein kinase A cata 100.0 1.5E-39 3.3E-44 352.0 18.4 240 480-776 23-271 (329)
41 KOG4721 Serine/threonine prote 100.0 2.8E-40 6.1E-45 346.3 11.7 239 481-780 130-368 (904)
42 KOG0580 Serine/threonine prote 100.0 8.8E-40 1.9E-44 310.7 13.6 244 479-776 26-273 (281)
43 cd05104 PTKc_Kit Catalytic dom 100.0 8.8E-39 1.9E-43 351.9 22.9 257 479-780 39-374 (375)
44 cd05106 PTKc_CSF-1R Catalytic 100.0 7.3E-39 1.6E-43 352.2 21.7 260 477-781 40-373 (374)
45 KOG0589 Serine/threonine prote 100.0 1.4E-39 3E-44 344.6 15.2 245 480-776 9-258 (426)
46 KOG0658 Glycogen synthase kina 100.0 2.7E-40 5.9E-45 334.2 9.3 255 479-776 28-306 (364)
47 KOG1095 Protein tyrosine kinas 100.0 3E-39 6.4E-44 371.7 18.6 265 479-790 696-971 (1025)
48 cd05584 STKc_p70S6K Catalytic 100.0 6.5E-39 1.4E-43 346.1 20.3 241 481-775 2-255 (323)
49 KOG2345 Serine/threonine prote 100.0 8.4E-40 1.8E-44 312.1 11.5 265 479-780 25-300 (302)
50 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.8E-38 3.9E-43 333.1 22.9 252 478-780 8-265 (266)
51 KOG0610 Putative serine/threon 100.0 2.5E-38 5.4E-43 322.9 23.0 281 481-775 83-391 (459)
52 cd05096 PTKc_DDR1 Catalytic do 100.0 2.4E-38 5.1E-43 339.0 23.1 260 480-779 10-304 (304)
53 KOG1989 ARK protein kinase fam 100.0 3.4E-39 7.4E-44 360.4 17.0 269 474-787 36-318 (738)
54 cd05594 STKc_PKB_alpha Catalyt 100.0 4.6E-39 1E-43 347.7 17.1 242 481-776 1-252 (325)
55 cd05608 STKc_GRK1 Catalytic do 100.0 2.1E-38 4.5E-43 335.2 21.4 248 483-776 1-257 (280)
56 PTZ00426 cAMP-dependent protei 100.0 9.1E-39 2E-43 346.7 19.1 241 479-776 34-284 (340)
57 cd06649 PKc_MEK2 Catalytic dom 100.0 3.1E-38 6.6E-43 342.1 23.0 254 480-776 10-301 (331)
58 cd05590 STKc_nPKC_eta Catalyti 100.0 1.1E-38 2.5E-43 343.7 19.4 235 482-770 2-241 (320)
59 cd05093 PTKc_TrkB Catalytic do 100.0 3.3E-38 7.2E-43 335.1 22.6 263 479-788 9-287 (288)
60 PTZ00267 NIMA-related protein 100.0 3E-38 6.5E-43 358.1 23.6 249 479-775 71-322 (478)
61 KOG0663 Protein kinase PITSLRE 100.0 6.5E-39 1.4E-43 317.9 15.7 255 480-776 81-361 (419)
62 cd05591 STKc_nPKC_epsilon Cata 100.0 1.2E-38 2.6E-43 343.9 19.1 241 482-776 2-254 (321)
63 KOG0196 Tyrosine kinase, EPH ( 100.0 4.8E-40 1E-44 356.9 8.1 256 477-783 631-894 (996)
64 KOG4279 Serine/threonine prote 100.0 2.4E-39 5.2E-44 345.6 13.1 250 478-776 578-832 (1226)
65 cd05592 STKc_nPKC_theta_delta 100.0 2E-38 4.4E-43 341.1 20.2 239 482-774 2-246 (316)
66 cd05052 PTKc_Abl Catalytic dom 100.0 8.1E-38 1.8E-42 327.5 24.0 251 479-780 10-262 (263)
67 cd05618 STKc_aPKC_iota Catalyt 100.0 2.5E-38 5.4E-43 342.3 19.9 245 481-770 1-250 (329)
68 cd05084 PTKc_Fes Catalytic dom 100.0 1.1E-37 2.4E-42 324.2 24.1 249 481-779 1-252 (252)
69 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.4E-38 5.2E-43 343.4 19.7 247 480-776 6-257 (333)
70 cd05588 STKc_aPKC Catalytic do 100.0 2.7E-38 5.8E-43 342.2 19.9 249 482-775 2-261 (329)
71 cd05114 PTKc_Tec_Rlk Catalytic 100.0 9.7E-38 2.1E-42 325.5 23.5 247 480-778 9-256 (256)
72 cd05582 STKc_RSK_N N-terminal 100.0 6.3E-39 1.4E-43 345.7 14.9 238 481-772 2-245 (318)
73 cd05072 PTKc_Lyn Catalytic dom 100.0 1E-37 2.3E-42 326.2 23.6 250 480-780 11-261 (261)
74 cd05048 PTKc_Ror Catalytic Dom 100.0 1.2E-37 2.6E-42 329.9 24.2 255 480-780 10-283 (283)
75 cd05589 STKc_PKN Catalytic dom 100.0 3E-38 6.5E-43 341.2 19.9 241 480-775 4-256 (324)
76 cd05068 PTKc_Frk_like Catalyti 100.0 1.4E-37 3E-42 325.4 24.3 251 479-780 10-261 (261)
77 cd05575 STKc_SGK Catalytic dom 100.0 1.6E-38 3.5E-43 343.2 17.6 236 482-771 2-242 (323)
78 cd05570 STKc_PKC Catalytic dom 100.0 3.2E-38 6.9E-43 340.0 19.9 241 482-776 2-252 (318)
79 KOG0660 Mitogen-activated prot 100.0 1.2E-38 2.6E-43 321.8 15.1 257 480-776 27-310 (359)
80 KOG0194 Protein tyrosine kinas 100.0 9.2E-39 2E-43 344.9 15.3 265 467-784 151-424 (474)
81 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.1E-37 2.4E-42 326.0 23.0 251 479-780 10-261 (261)
82 cd05094 PTKc_TrkC Catalytic do 100.0 1.2E-37 2.6E-42 331.4 23.5 259 480-785 10-287 (291)
83 KOG0032 Ca2+/calmodulin-depend 100.0 5.1E-38 1.1E-42 338.6 20.8 244 480-775 40-292 (382)
84 cd05619 STKc_nPKC_theta Cataly 100.0 4.5E-38 9.8E-43 338.3 20.4 240 482-775 2-247 (316)
85 KOG0607 MAP kinase-interacting 100.0 2.5E-38 5.4E-43 311.3 16.5 273 468-775 71-360 (463)
86 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.1E-37 2.3E-42 331.2 22.8 254 480-775 10-284 (288)
87 cd05105 PTKc_PDGFR_alpha Catal 100.0 1E-37 2.2E-42 344.4 23.3 260 478-782 40-399 (400)
88 cd05049 PTKc_Trk Catalytic dom 100.0 1.5E-37 3.3E-42 328.5 23.7 253 480-779 10-280 (280)
89 cd05620 STKc_nPKC_delta Cataly 100.0 4.1E-38 8.9E-43 338.7 19.6 240 481-774 1-246 (316)
90 cd05602 STKc_SGK1 Catalytic do 100.0 2.4E-38 5.2E-43 342.2 17.8 241 482-776 2-247 (325)
91 cd05111 PTK_HER3 Pseudokinase 100.0 1.6E-37 3.5E-42 328.3 23.6 259 480-789 12-277 (279)
92 PLN00034 mitogen-activated pro 100.0 6.2E-38 1.3E-42 342.9 20.8 242 480-776 79-328 (353)
93 cd05108 PTKc_EGFR Catalytic do 100.0 1.2E-37 2.5E-42 335.5 22.4 258 479-787 11-275 (316)
94 cd05604 STKc_SGK3 Catalytic do 100.0 1.9E-38 4.2E-43 342.9 16.3 241 482-776 2-247 (325)
95 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.7E-37 3.7E-42 329.0 23.2 263 480-781 9-284 (284)
96 KOG0574 STE20-like serine/thre 100.0 9.8E-40 2.1E-44 318.2 5.5 245 480-776 38-283 (502)
97 cd05614 STKc_MSK2_N N-terminal 100.0 5.4E-38 1.2E-42 340.6 19.7 248 480-776 5-267 (332)
98 KOG1094 Discoidin domain recep 100.0 3.4E-38 7.3E-43 332.3 17.4 260 479-781 542-805 (807)
99 KOG0594 Protein kinase PCTAIRE 100.0 2.5E-38 5.3E-43 321.1 15.8 259 481-780 17-308 (323)
100 cd05607 STKc_GRK7 Catalytic do 100.0 1E-37 2.2E-42 329.4 21.1 245 483-776 1-250 (277)
101 PHA03212 serine/threonine kina 100.0 1.5E-37 3.2E-42 343.0 23.2 250 479-775 96-375 (391)
102 cd07848 STKc_CDKL5 Catalytic d 100.0 1.5E-37 3.2E-42 330.0 22.1 256 480-775 6-283 (287)
103 cd06650 PKc_MEK1 Catalytic dom 100.0 1.5E-37 3.2E-42 336.9 22.4 255 479-776 9-299 (333)
104 PF07714 Pkinase_Tyr: Protein 100.0 6.8E-38 1.5E-42 327.2 18.7 249 480-777 4-259 (259)
105 cd05605 STKc_GRK4_like Catalyt 100.0 1.5E-37 3.2E-42 329.6 21.4 248 480-776 5-261 (285)
106 cd07868 STKc_CDK8 Catalytic do 100.0 2.7E-37 5.9E-42 332.9 23.9 200 480-715 6-219 (317)
107 cd05626 STKc_LATS2 Catalytic d 100.0 7.1E-38 1.5E-42 345.9 19.7 283 480-776 6-305 (381)
108 cd05603 STKc_SGK2 Catalytic do 100.0 5E-38 1.1E-42 339.1 18.0 237 481-771 1-242 (321)
109 cd05587 STKc_cPKC Catalytic do 100.0 9.9E-38 2.1E-42 337.2 19.8 237 480-770 5-246 (324)
110 cd05033 PTKc_EphR Catalytic do 100.0 4.1E-37 9E-42 322.7 23.9 252 479-780 8-265 (266)
111 cd05085 PTKc_Fer Catalytic dom 100.0 6.6E-37 1.4E-41 317.9 24.8 247 481-778 1-249 (250)
112 cd05599 STKc_NDR_like Catalyti 100.0 6.6E-38 1.4E-42 344.5 18.2 282 480-776 6-296 (364)
113 cd07859 STKc_TDY_MAPK_plant Ca 100.0 7.2E-38 1.6E-42 340.6 18.2 258 480-776 5-290 (338)
114 cd05109 PTKc_HER2 Catalytic do 100.0 5E-37 1.1E-41 324.5 23.9 258 480-788 12-276 (279)
115 cd05113 PTKc_Btk_Bmx Catalytic 100.0 4.8E-37 1E-41 320.4 23.4 246 480-778 9-256 (256)
116 cd05596 STKc_ROCK Catalytic do 100.0 1.1E-37 2.4E-42 342.4 19.6 249 478-776 46-304 (370)
117 cd05628 STKc_NDR1 Catalytic do 100.0 2.1E-37 4.5E-42 340.0 21.7 277 480-776 6-293 (363)
118 cd05115 PTKc_Zap-70 Catalytic 100.0 5.1E-37 1.1E-41 320.3 23.6 248 483-780 3-255 (257)
119 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2.9E-37 6.3E-42 330.4 22.3 250 480-775 10-287 (303)
120 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.5E-37 3.3E-42 335.9 20.3 242 482-770 2-248 (327)
121 cd05629 STKc_NDR_like_fungal C 100.0 1.2E-37 2.7E-42 343.7 19.8 282 480-776 6-305 (377)
122 KOG0667 Dual-specificity tyros 100.0 4.2E-38 9.1E-43 340.9 15.7 192 479-714 190-390 (586)
123 cd05116 PTKc_Syk Catalytic dom 100.0 4.8E-37 1E-41 320.5 23.3 248 482-780 2-255 (257)
124 cd05616 STKc_cPKC_beta Catalyt 100.0 1.3E-37 2.9E-42 336.1 19.6 237 480-770 5-246 (323)
125 cd08228 STKc_Nek6 Catalytic do 100.0 4.7E-37 1E-41 322.4 23.3 254 480-781 7-266 (267)
126 cd05059 PTKc_Tec_like Catalyti 100.0 4.8E-37 1E-41 320.3 22.8 247 480-778 9-256 (256)
127 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 4.6E-37 9.9E-42 321.6 22.7 239 482-778 2-262 (262)
128 PTZ00283 serine/threonine prot 100.0 2.5E-37 5.5E-42 350.6 22.3 249 480-776 37-297 (496)
129 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3.7E-37 7.9E-42 326.3 21.9 262 479-781 8-282 (283)
130 cd05621 STKc_ROCK2 Catalytic d 100.0 1.6E-37 3.4E-42 340.9 19.4 249 478-776 46-304 (370)
131 cd05054 PTKc_VEGFR Catalytic d 100.0 4E-37 8.7E-42 333.8 22.4 258 480-782 12-335 (337)
132 cd05062 PTKc_IGF-1R Catalytic 100.0 8E-37 1.7E-41 322.6 24.1 255 479-779 10-277 (277)
133 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 7.2E-37 1.6E-41 319.8 23.4 248 480-779 11-259 (260)
134 cd05573 STKc_ROCK_NDR_like Cat 100.0 6.9E-38 1.5E-42 342.5 16.1 275 480-776 6-285 (350)
135 KOG4717 Serine/threonine prote 100.0 8.6E-38 1.9E-42 324.1 15.8 242 480-775 23-269 (864)
136 cd05090 PTKc_Ror1 Catalytic do 100.0 8.8E-37 1.9E-41 323.3 24.0 254 480-779 10-282 (283)
137 cd05053 PTKc_FGFR Catalytic do 100.0 6.1E-37 1.3E-41 326.3 22.8 259 477-781 14-292 (293)
138 cd05601 STKc_CRIK Catalytic do 100.0 6.2E-38 1.3E-42 339.8 15.4 247 480-775 6-262 (330)
139 cd05615 STKc_cPKC_alpha Cataly 100.0 2.8E-37 6.1E-42 333.3 20.4 237 480-770 5-246 (323)
140 cd07862 STKc_CDK6 Catalytic do 100.0 5.7E-37 1.2E-41 326.0 22.4 246 480-775 6-286 (290)
141 cd05039 PTKc_Csk_like Catalyti 100.0 1.1E-36 2.5E-41 317.4 23.9 246 479-780 10-256 (256)
142 cd05107 PTKc_PDGFR_beta Cataly 100.0 8.5E-37 1.8E-41 336.9 24.1 259 477-780 39-399 (401)
143 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 7.4E-37 1.6E-41 324.1 22.7 268 476-780 5-283 (284)
144 cd05060 PTKc_Syk_like Catalyti 100.0 1.2E-36 2.6E-41 317.5 23.7 250 481-781 1-256 (257)
145 cd05625 STKc_LATS1 Catalytic d 100.0 1.9E-37 4.2E-42 342.8 18.7 281 480-775 6-304 (382)
146 cd05055 PTKc_PDGFR Catalytic d 100.0 1.1E-36 2.4E-41 325.6 23.9 256 477-780 37-301 (302)
147 cd05075 PTKc_Axl Catalytic dom 100.0 1E-36 2.2E-41 320.7 23.3 254 480-780 4-271 (272)
148 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.3E-36 2.9E-41 319.2 24.0 254 478-780 8-267 (268)
149 cd05045 PTKc_RET Catalytic dom 100.0 9.3E-37 2E-41 324.4 22.9 257 480-782 5-288 (290)
150 cd05598 STKc_LATS Catalytic do 100.0 1.1E-37 2.4E-42 344.1 16.3 282 480-776 6-301 (376)
151 cd05069 PTKc_Yes Catalytic dom 100.0 1.8E-36 3.9E-41 316.8 24.5 248 480-779 11-259 (260)
152 cd05092 PTKc_TrkA Catalytic do 100.0 1.1E-36 2.3E-41 322.2 22.9 254 480-779 10-280 (280)
153 cd05071 PTKc_Src Catalytic dom 100.0 1.6E-36 3.5E-41 317.5 24.1 250 479-780 10-260 (262)
154 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.5E-36 3.3E-41 317.3 23.8 249 480-780 11-260 (260)
155 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 7.3E-37 1.6E-41 322.3 21.4 239 482-778 2-274 (274)
156 cd05040 PTKc_Ack_like Catalyti 100.0 1.4E-36 3.1E-41 316.8 23.4 251 481-779 1-257 (257)
157 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.5E-36 3.2E-41 325.1 24.0 262 476-783 16-299 (304)
158 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.1E-36 2.4E-41 326.6 22.9 260 477-782 20-301 (307)
159 cd08229 STKc_Nek7 Catalytic do 100.0 1.3E-36 2.8E-41 319.1 22.8 254 480-781 7-266 (267)
160 cd08529 STKc_FA2-like Catalyti 100.0 1.6E-36 3.5E-41 316.1 23.4 245 480-776 5-253 (256)
161 cd07867 STKc_CDC2L6 Catalytic 100.0 1.7E-36 3.7E-41 326.7 23.8 200 480-715 6-219 (317)
162 cd06654 STKc_PAK1 Catalytic do 100.0 1.3E-36 2.8E-41 324.2 22.6 245 480-776 25-270 (296)
163 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.7E-36 5.9E-41 316.4 24.6 254 480-781 7-266 (267)
164 KOG0579 Ste20-like serine/thre 100.0 5.4E-38 1.2E-42 332.0 11.6 245 482-776 39-289 (1187)
165 cd05034 PTKc_Src_like Catalyti 100.0 1.6E-36 3.4E-41 317.3 22.6 250 479-779 10-260 (261)
166 KOG0577 Serine/threonine prote 100.0 1E-37 2.2E-42 328.3 13.5 241 481-777 32-279 (948)
167 cd05082 PTKc_Csk Catalytic dom 100.0 2E-36 4.4E-41 315.6 23.3 245 479-780 10-256 (256)
168 cd05047 PTKc_Tie Catalytic dom 100.0 1.8E-36 3.9E-41 318.6 23.1 252 481-781 1-269 (270)
169 cd06646 STKc_MAP4K5 Catalytic 100.0 8.4E-37 1.8E-41 320.5 20.5 248 480-777 14-266 (267)
170 cd05035 PTKc_Axl_like Catalyti 100.0 2.2E-36 4.8E-41 318.2 23.8 254 480-780 4-272 (273)
171 cd05036 PTKc_ALK_LTK Catalytic 100.0 2.4E-36 5.2E-41 319.0 24.0 254 480-779 11-277 (277)
172 cd05032 PTKc_InsR_like Catalyt 100.0 2E-36 4.4E-41 319.4 23.5 255 479-779 10-277 (277)
173 cd05091 PTKc_Ror2 Catalytic do 100.0 1.4E-36 3E-41 321.8 22.3 253 480-779 10-282 (283)
174 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 4E-37 8.7E-42 321.3 17.9 240 481-778 1-258 (258)
175 cd05089 PTKc_Tie1 Catalytic do 100.0 1.5E-36 3.2E-41 324.0 22.3 258 480-786 7-281 (297)
176 cd00192 PTKc Catalytic domain 100.0 2.6E-36 5.6E-41 315.2 23.3 252 481-778 1-262 (262)
177 cd05632 STKc_GRK5 Catalytic do 100.0 1.9E-36 4E-41 321.2 22.3 248 480-776 5-261 (285)
178 cd05088 PTKc_Tie2 Catalytic do 100.0 1.2E-36 2.5E-41 325.7 20.9 254 480-782 12-282 (303)
179 cd06625 STKc_MEKK3_like Cataly 100.0 2.6E-36 5.7E-41 315.9 23.0 248 480-776 7-260 (263)
180 PRK13184 pknD serine/threonine 100.0 1.8E-36 3.9E-41 351.9 23.8 275 480-782 7-292 (932)
181 cd05043 PTK_Ryk Pseudokinase d 100.0 2.4E-36 5.3E-41 319.4 23.0 258 479-782 10-278 (280)
182 KOG3653 Transforming growth fa 100.0 1.5E-36 3.3E-41 314.3 20.6 257 481-783 216-506 (534)
183 cd05041 PTKc_Fes_like Catalyti 100.0 3.5E-36 7.6E-41 312.7 23.5 249 481-779 1-251 (251)
184 cd05058 PTKc_Met_Ron Catalytic 100.0 2.8E-36 6.1E-41 315.6 22.9 252 481-781 1-260 (262)
185 cd05622 STKc_ROCK1 Catalytic d 100.0 8.1E-37 1.8E-41 335.6 19.6 249 478-776 46-304 (371)
186 cd05066 PTKc_EphR_A Catalytic 100.0 2.7E-36 5.9E-41 316.7 22.8 252 480-780 9-266 (267)
187 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 3.5E-36 7.7E-41 316.2 23.5 253 482-778 2-268 (269)
188 cd05586 STKc_Sck1_like Catalyt 100.0 3.2E-37 6.8E-42 334.2 15.9 239 483-775 1-252 (330)
189 cd05099 PTKc_FGFR4 Catalytic d 100.0 3.8E-36 8.2E-41 323.5 24.1 258 478-781 15-294 (314)
190 cd05056 PTKc_FAK Catalytic dom 100.0 2.8E-36 6E-41 317.2 22.5 254 479-784 10-269 (270)
191 cd07853 STKc_NLK Catalytic dom 100.0 1.3E-36 2.9E-41 334.9 21.0 256 480-776 5-288 (372)
192 PF00069 Pkinase: Protein kina 100.0 1.4E-36 3E-41 317.2 19.8 249 480-775 4-256 (260)
193 cd06619 PKc_MKK5 Catalytic dom 100.0 2.5E-36 5.3E-41 319.2 21.9 246 480-776 6-253 (279)
194 cd06624 STKc_ASK Catalytic dom 100.0 3.9E-36 8.5E-41 315.7 23.2 250 479-776 12-265 (268)
195 cd08227 PK_STRAD_alpha Pseudok 100.0 2.4E-36 5.1E-41 327.0 22.1 271 481-783 4-316 (327)
196 cd05051 PTKc_DDR Catalytic dom 100.0 3.6E-36 7.9E-41 320.7 23.1 257 480-779 10-296 (296)
197 cd07876 STKc_JNK2 Catalytic do 100.0 3.8E-36 8.2E-41 329.7 23.9 252 480-776 26-315 (359)
198 cd05112 PTKc_Itk Catalytic dom 100.0 4.2E-36 9E-41 313.1 23.0 246 480-778 9-256 (256)
199 cd05097 PTKc_DDR_like Catalyti 100.0 2.7E-36 5.8E-41 321.7 21.9 260 480-779 10-295 (295)
200 PTZ00036 glycogen synthase kin 100.0 2.4E-36 5.3E-41 338.6 22.7 255 479-776 70-351 (440)
201 cd06655 STKc_PAK2 Catalytic do 100.0 3.4E-36 7.4E-41 320.9 22.6 245 480-776 24-269 (296)
202 cd05100 PTKc_FGFR3 Catalytic d 100.0 4.6E-36 1E-40 325.7 24.0 268 469-782 6-295 (334)
203 cd06643 STKc_SLK Catalytic dom 100.0 5.4E-36 1.2E-40 317.2 23.9 247 480-776 10-262 (282)
204 cd06658 STKc_PAK5 Catalytic do 100.0 1.8E-36 3.9E-41 322.4 20.2 245 480-776 27-272 (292)
205 cd05050 PTKc_Musk Catalytic do 100.0 4.1E-36 8.8E-41 319.1 22.9 254 480-779 10-288 (288)
206 KOG4278 Protein tyrosine kinas 100.0 6.7E-37 1.5E-41 323.2 16.4 266 468-784 260-527 (1157)
207 cd05630 STKc_GRK6 Catalytic do 100.0 2.2E-36 4.7E-41 320.6 20.6 247 480-775 5-260 (285)
208 KOG0596 Dual specificity; seri 100.0 3.6E-37 7.9E-42 323.6 14.3 258 470-776 356-627 (677)
209 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.5E-36 3.2E-41 325.9 19.4 255 480-775 11-285 (309)
210 cd06645 STKc_MAP4K3 Catalytic 100.0 2.4E-36 5.1E-41 317.1 20.5 246 480-775 14-264 (267)
211 cd05627 STKc_NDR2 Catalytic do 100.0 9.5E-37 2.1E-41 334.5 18.1 276 480-776 6-293 (360)
212 cd05061 PTKc_InsR Catalytic do 100.0 7.4E-36 1.6E-40 317.1 24.1 255 480-781 11-279 (288)
213 cd08219 STKc_Nek3 Catalytic do 100.0 4.4E-36 9.5E-41 312.8 21.7 245 480-776 5-252 (255)
214 cd05044 PTKc_c-ros Catalytic d 100.0 4.4E-36 9.6E-41 315.4 21.9 252 482-779 2-269 (269)
215 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 4.5E-36 9.9E-41 317.8 22.1 262 481-781 10-284 (284)
216 cd05065 PTKc_EphR_B Catalytic 100.0 7.2E-36 1.6E-40 313.8 23.1 255 479-780 8-268 (269)
217 cd06656 STKc_PAK3 Catalytic do 100.0 3.9E-36 8.6E-41 320.6 21.2 244 480-775 24-268 (297)
218 cd05042 PTKc_Aatyk Catalytic d 100.0 5E-36 1.1E-40 315.0 21.6 253 482-778 2-268 (269)
219 KOG4257 Focal adhesion tyrosin 100.0 9.8E-37 2.1E-41 322.8 16.1 265 466-782 380-651 (974)
220 cd05057 PTKc_EGFR_like Catalyt 100.0 9.7E-36 2.1E-40 314.7 23.5 260 479-789 11-277 (279)
221 PHA03211 serine/threonine kina 100.0 5E-36 1.1E-40 334.7 22.4 251 478-776 172-455 (461)
222 cd05073 PTKc_Hck Catalytic dom 100.0 1.1E-35 2.3E-40 311.0 23.5 249 480-780 11-260 (260)
223 cd06628 STKc_MAPKKK_Byr2_like 100.0 8.8E-36 1.9E-40 312.7 22.9 249 480-775 5-263 (267)
224 cd06644 STKc_STK10_LOK Catalyt 100.0 1.2E-35 2.5E-40 316.3 24.1 247 480-776 17-269 (292)
225 cd05095 PTKc_DDR2 Catalytic do 100.0 6.7E-36 1.4E-40 318.8 22.2 260 480-779 10-296 (296)
226 cd06631 STKc_YSK4 Catalytic do 100.0 8.6E-36 1.9E-40 312.5 22.7 250 480-775 5-261 (265)
227 cd05103 PTKc_VEGFR2 Catalytic 100.0 5.7E-36 1.2E-40 325.9 22.1 260 478-782 10-341 (343)
228 cd06615 PKc_MEK Catalytic doma 100.0 8.6E-36 1.9E-40 319.7 23.0 255 479-776 5-287 (308)
229 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 3.5E-36 7.5E-41 314.1 19.4 238 481-778 1-259 (259)
230 cd06659 STKc_PAK6 Catalytic do 100.0 3.7E-36 8.1E-41 320.7 19.9 244 481-776 27-271 (297)
231 cd05110 PTKc_HER4 Catalytic do 100.0 7.5E-36 1.6E-40 319.4 22.1 257 480-787 12-275 (303)
232 cd07874 STKc_JNK3 Catalytic do 100.0 6.5E-36 1.4E-40 327.4 22.1 252 480-776 22-311 (355)
233 PHA03209 serine/threonine kina 100.0 5.8E-36 1.3E-40 327.5 21.6 188 477-712 68-256 (357)
234 PHA03207 serine/threonine kina 100.0 3.4E-36 7.3E-41 333.5 19.8 253 479-776 96-375 (392)
235 cd06613 STKc_MAP4K3_like Catal 100.0 2.1E-35 4.6E-40 308.7 24.8 247 480-775 8-259 (262)
236 cd07863 STKc_CDK4 Catalytic do 100.0 8.2E-36 1.8E-40 316.7 21.5 246 480-775 5-284 (288)
237 cd06612 STKc_MST1_2 Catalytic 100.0 1E-35 2.2E-40 310.0 21.8 244 480-775 8-252 (256)
238 cd07875 STKc_JNK1 Catalytic do 100.0 1.1E-35 2.5E-40 326.5 23.2 252 480-776 29-318 (364)
239 cd06637 STKc_TNIK Catalytic do 100.0 1E-35 2.2E-40 313.1 21.8 245 480-775 11-268 (272)
240 PTZ00284 protein kinase; Provi 100.0 1.2E-35 2.7E-40 336.6 23.9 252 478-775 132-437 (467)
241 cd08223 STKc_Nek4 Catalytic do 100.0 1.9E-35 4.1E-40 308.2 23.4 245 480-776 5-254 (257)
242 cd06611 STKc_SLK_like Catalyti 100.0 1.1E-35 2.3E-40 314.5 21.3 247 480-776 10-262 (280)
243 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.1E-35 2.3E-40 314.0 21.2 243 480-776 9-253 (277)
244 cd05597 STKc_DMPK_like Catalyt 100.0 7.6E-36 1.6E-40 323.3 20.2 249 480-776 6-266 (331)
245 cd05083 PTKc_Chk Catalytic dom 100.0 2E-35 4.3E-40 307.7 22.5 243 479-779 10-253 (254)
246 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.2E-35 2.6E-40 323.7 21.7 251 480-776 20-298 (343)
247 cd05623 STKc_MRCK_alpha Cataly 100.0 5.7E-36 1.2E-40 324.5 18.9 249 480-776 6-266 (332)
248 KOG4645 MAPKKK (MAP kinase kin 100.0 1.5E-37 3.3E-42 354.4 6.7 250 479-776 1239-1494(1509)
249 cd05624 STKc_MRCK_beta Catalyt 100.0 5.3E-36 1.1E-40 324.6 18.2 249 480-776 6-266 (331)
250 cd08221 STKc_Nek9 Catalytic do 100.0 3.2E-35 6.9E-40 306.4 23.2 247 479-777 4-254 (256)
251 cd05046 PTK_CCK4 Pseudokinase 100.0 2.5E-35 5.4E-40 310.8 22.6 253 481-779 11-275 (275)
252 PTZ00266 NIMA-related protein 100.0 1.3E-35 2.7E-40 345.9 22.0 250 480-780 18-301 (1021)
253 cd07861 STKc_CDK1_euk Catalyti 100.0 1.2E-35 2.7E-40 314.8 20.1 256 480-775 5-281 (285)
254 cd06651 STKc_MEKK3 Catalytic d 100.0 3.2E-35 7E-40 308.4 22.8 247 479-775 6-260 (266)
255 cd08218 STKc_Nek1 Catalytic do 100.0 1.9E-35 4.2E-40 308.1 20.9 245 480-776 5-253 (256)
256 cd06640 STKc_MST4 Catalytic do 100.0 4.9E-35 1.1E-39 308.9 24.3 243 480-776 9-253 (277)
257 KOG0586 Serine/threonine prote 100.0 3.2E-36 6.9E-41 322.7 14.7 242 480-776 61-306 (596)
258 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 2.7E-35 5.8E-40 312.1 21.8 253 480-777 10-267 (284)
259 cd06648 STKc_PAK_II Catalytic 100.0 3.5E-35 7.5E-40 311.4 22.5 244 480-775 24-268 (285)
260 cd06609 STKc_MST3_like Catalyt 100.0 2.9E-35 6.4E-40 310.1 21.7 244 480-776 6-251 (274)
261 smart00219 TyrKc Tyrosine kina 100.0 5.3E-35 1.1E-39 304.8 23.3 248 480-777 4-258 (258)
262 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 4E-35 8.6E-40 311.2 22.6 247 480-776 6-262 (286)
263 cd06630 STKc_MEKK1 Catalytic d 100.0 4.6E-35 1E-39 307.4 22.7 252 479-775 4-263 (268)
264 cd05580 STKc_PKA Catalytic dom 100.0 3.1E-35 6.7E-40 312.7 21.4 239 480-775 6-253 (290)
265 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.4E-35 3E-40 317.1 18.4 255 480-775 11-285 (301)
266 cd06652 STKc_MEKK2 Catalytic d 100.0 6.2E-35 1.3E-39 306.0 22.9 246 480-775 7-260 (265)
267 KOG0604 MAP kinase-activated p 100.0 2.7E-36 5.8E-41 294.9 11.5 250 473-776 60-322 (400)
268 KOG0584 Serine/threonine prote 100.0 6.1E-36 1.3E-40 320.8 14.7 240 480-776 45-296 (632)
269 cd05633 STKc_GRK3 Catalytic do 100.0 4.9E-35 1.1E-39 309.2 21.6 242 482-776 1-255 (279)
270 cd06657 STKc_PAK4 Catalytic do 100.0 5.5E-35 1.2E-39 310.9 21.9 244 481-776 26-270 (292)
271 cd05086 PTKc_Aatyk2 Catalytic 100.0 7.2E-35 1.6E-39 306.1 22.5 250 482-778 2-267 (268)
272 cd05074 PTKc_Tyro3 Catalytic d 100.0 6.7E-35 1.5E-39 307.1 22.4 255 480-780 4-272 (273)
273 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1E-34 2.2E-39 308.2 23.7 253 480-775 6-265 (287)
274 cd08220 STKc_Nek8 Catalytic do 100.0 7.8E-35 1.7E-39 303.4 22.3 245 479-776 4-253 (256)
275 KOG0983 Mitogen-activated prot 100.0 1.4E-35 3E-40 286.3 15.1 254 470-776 89-349 (391)
276 cd06632 STKc_MEKK1_plant Catal 100.0 7.8E-35 1.7E-39 303.6 22.1 243 480-775 5-254 (258)
277 cd06638 STKc_myosinIIIA Cataly 100.0 6.8E-35 1.5E-39 309.3 21.4 249 480-776 23-283 (286)
278 cd08528 STKc_Nek10 Catalytic d 100.0 1.4E-34 2.9E-39 304.1 23.3 251 480-779 5-269 (269)
279 cd06629 STKc_MAPKKK_Bck1_like 100.0 7E-35 1.5E-39 306.8 21.2 249 480-776 6-269 (272)
280 cd05577 STKc_GRK Catalytic dom 100.0 7E-35 1.5E-39 307.8 21.1 244 483-775 1-253 (277)
281 cd05609 STKc_MAST Catalytic do 100.0 1E-34 2.3E-39 311.0 22.7 261 480-779 6-273 (305)
282 cd05574 STKc_phototropin_like 100.0 1.7E-34 3.8E-39 310.9 24.1 275 480-775 6-288 (316)
283 cd06647 STKc_PAK_I Catalytic d 100.0 7.1E-35 1.5E-39 310.3 20.7 245 480-776 24-269 (293)
284 cd06636 STKc_MAP4K4_6 Catalyti 100.0 8E-35 1.7E-39 308.1 20.8 245 480-775 21-278 (282)
285 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.7E-34 3.7E-39 306.2 23.3 255 480-775 6-282 (286)
286 cd06626 STKc_MEKK4 Catalytic d 100.0 1.7E-34 3.6E-39 302.3 22.8 250 480-775 5-260 (264)
287 KOG1025 Epidermal growth facto 100.0 8.2E-36 1.8E-40 324.9 13.2 260 478-788 699-965 (1177)
288 cd06605 PKc_MAPKK Catalytic do 100.0 8.3E-35 1.8E-39 304.9 20.1 247 480-776 6-257 (265)
289 cd07842 STKc_CDK8_like Catalyt 100.0 1.1E-34 2.5E-39 312.2 21.6 263 480-776 5-313 (316)
290 KOG2052 Activin A type IB rece 100.0 3.8E-35 8.3E-40 301.6 16.7 258 480-783 216-506 (513)
291 cd06639 STKc_myosinIIIB Cataly 100.0 1.9E-34 4.1E-39 306.8 22.6 249 480-776 27-287 (291)
292 cd08217 STKc_Nek2 Catalytic do 100.0 2.6E-34 5.7E-39 300.7 23.4 248 480-776 5-262 (265)
293 cd05572 STKc_cGK_PKG Catalytic 100.0 1.5E-34 3.3E-39 302.5 21.5 242 483-775 1-251 (262)
294 cd07839 STKc_CDK5 Catalytic do 100.0 5.8E-35 1.2E-39 309.5 18.5 253 480-775 5-280 (284)
295 cd06641 STKc_MST3 Catalytic do 100.0 3E-34 6.5E-39 303.0 23.7 244 479-776 8-253 (277)
296 KOG0690 Serine/threonine prote 100.0 8.9E-36 1.9E-40 293.6 11.0 242 480-775 173-423 (516)
297 cd07841 STKc_CDK7 Catalytic do 100.0 1.8E-34 3.8E-39 308.1 21.9 250 480-776 5-282 (298)
298 KOG1035 eIF-2alpha kinase GCN2 100.0 2E-35 4.4E-40 335.8 15.3 263 481-776 485-871 (1351)
299 cd07832 STKc_CCRK Catalytic do 100.0 2.4E-34 5.2E-39 305.0 22.6 257 480-776 5-282 (286)
300 cd05579 STKc_MAST_like Catalyt 100.0 1E-34 2.2E-39 303.8 19.4 250 483-778 1-256 (265)
301 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.8E-34 6E-39 301.1 22.5 252 480-775 6-263 (267)
302 cd06608 STKc_myosinIII_like Ca 100.0 2.5E-34 5.5E-39 302.7 22.2 248 480-775 11-271 (275)
303 KOG0986 G protein-coupled rece 100.0 1.4E-35 2.9E-40 304.7 11.7 241 480-769 190-434 (591)
304 cd06623 PKc_MAPKK_plant_like C 100.0 3.5E-34 7.6E-39 299.8 22.7 246 480-776 6-256 (264)
305 cd08216 PK_STRAD Pseudokinase 100.0 2.2E-34 4.8E-39 309.8 21.8 262 482-776 9-295 (314)
306 cd07860 STKc_CDK2_3 Catalytic 100.0 2.4E-34 5.2E-39 304.8 21.6 256 480-775 5-280 (284)
307 cd06917 STKc_NAK1_like Catalyt 100.0 2E-34 4.3E-39 304.3 20.8 244 480-776 6-255 (277)
308 cd06617 PKc_MKK3_6 Catalytic d 100.0 2.6E-34 5.6E-39 304.3 21.8 247 480-775 6-260 (283)
309 cd05606 STKc_beta_ARK Catalyti 100.0 2.6E-34 5.6E-39 303.6 21.5 241 482-775 1-254 (278)
310 cd06607 STKc_TAO Catalytic dom 100.0 4.4E-34 9.5E-39 306.4 23.6 241 480-776 20-267 (307)
311 cd06635 STKc_TAO1 Catalytic do 100.0 7E-34 1.5E-38 306.2 25.2 249 480-784 30-285 (317)
312 cd07844 STKc_PCTAIRE_like Cata 100.0 4.9E-34 1.1E-38 303.6 23.2 252 480-775 10-287 (291)
313 cd06614 STKc_PAK Catalytic dom 100.0 4.5E-34 9.8E-39 303.1 22.8 246 480-776 24-270 (286)
314 PHA03210 serine/threonine kina 100.0 1E-34 2.2E-39 330.4 18.9 262 479-776 152-454 (501)
315 cd06616 PKc_MKK4 Catalytic dom 100.0 1.6E-34 3.5E-39 306.8 19.1 248 481-776 10-267 (288)
316 cd05611 STKc_Rim15_like Cataly 100.0 2.9E-34 6.3E-39 300.0 20.6 243 482-778 3-250 (260)
317 cd05578 STKc_Yank1 Catalytic d 100.0 1.4E-34 3E-39 302.1 18.1 244 479-774 4-253 (258)
318 cd05122 PKc_STE Catalytic doma 100.0 6.3E-34 1.4E-38 295.2 22.7 246 480-776 5-251 (253)
319 cd08225 STKc_Nek5 Catalytic do 100.0 3E-34 6.4E-39 299.2 20.2 246 480-776 5-254 (257)
320 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.5E-34 5.4E-39 304.9 20.0 255 480-775 6-282 (286)
321 cd08226 PK_STRAD_beta Pseudoki 100.0 7.2E-34 1.6E-38 307.7 23.7 263 482-776 5-308 (328)
322 KOG4250 TANK binding protein k 100.0 1.6E-35 3.4E-40 321.3 10.6 196 480-714 18-226 (732)
323 PHA02882 putative serine/threo 100.0 5.9E-34 1.3E-38 303.3 22.5 259 480-778 17-294 (294)
324 KOG0199 ACK and related non-re 100.0 6.7E-35 1.5E-39 312.7 15.0 249 480-777 115-369 (1039)
325 cd07837 STKc_CdkB_plant Cataly 100.0 5.8E-34 1.2E-38 303.6 22.2 260 479-775 5-290 (295)
326 cd07870 STKc_PFTAIRE2 Catalyti 100.0 5.2E-34 1.1E-38 303.4 21.8 253 480-775 10-287 (291)
327 KOG0666 Cyclin C-dependent kin 100.0 6.7E-35 1.4E-39 286.3 13.0 263 480-776 29-337 (438)
328 KOG1006 Mitogen-activated prot 100.0 4.9E-36 1.1E-40 288.5 4.4 256 469-776 60-327 (361)
329 PHA03390 pk1 serine/threonine- 100.0 9.2E-34 2E-38 297.5 21.4 234 483-775 24-261 (267)
330 cd06627 STKc_Cdc7_like Catalyt 100.0 1.3E-33 2.9E-38 293.5 22.3 243 480-775 5-250 (254)
331 cd07843 STKc_CDC2L1 Catalytic 100.0 1.2E-33 2.6E-38 301.0 22.3 254 480-775 10-289 (293)
332 cd07833 STKc_CDKL Catalytic do 100.0 6.5E-34 1.4E-38 302.0 20.1 255 480-775 6-284 (288)
333 cd07831 STKc_MOK Catalytic dom 100.0 1.8E-33 3.8E-38 297.7 23.3 254 480-776 4-279 (282)
334 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.6E-33 3.5E-38 295.1 22.7 247 479-775 6-260 (264)
335 cd07850 STKc_JNK Catalytic dom 100.0 1.4E-33 3E-38 308.6 23.1 252 480-776 21-311 (353)
336 cd07835 STKc_CDK1_like Catalyt 100.0 3E-34 6.5E-39 303.9 17.3 256 480-775 4-279 (283)
337 cd07836 STKc_Pho85 Catalytic d 100.0 1.6E-33 3.5E-38 298.4 22.6 257 480-775 5-280 (284)
338 cd06606 STKc_MAPKKK Catalytic 100.0 2.1E-33 4.6E-38 292.5 22.6 247 480-775 5-256 (260)
339 cd07849 STKc_ERK1_2_like Catal 100.0 9.6E-34 2.1E-38 307.8 20.8 261 480-780 10-298 (336)
340 cd05583 STKc_MSK_N N-terminal 100.0 9.1E-34 2E-38 301.0 20.2 252 480-780 5-267 (288)
341 cd08530 STKc_CNK2-like Catalyt 100.0 1.5E-33 3.4E-38 293.5 21.5 245 480-776 5-253 (256)
342 cd05613 STKc_MSK1_N N-terminal 100.0 1.4E-33 3.1E-38 299.8 21.1 248 480-776 5-268 (290)
343 cd07840 STKc_CDK9_like Catalyt 100.0 2.2E-33 4.8E-38 297.6 21.9 254 480-775 4-283 (287)
344 cd08215 STKc_Nek Catalytic dom 100.0 2.3E-33 5E-38 292.2 21.6 247 480-776 5-255 (258)
345 cd06633 STKc_TAO3 Catalytic do 100.0 4.7E-33 1E-37 299.2 24.6 242 479-776 25-273 (313)
346 cd07845 STKc_CDK10 Catalytic d 100.0 2.2E-33 4.8E-38 301.3 21.9 256 480-776 12-290 (309)
347 KOG4236 Serine/threonine prote 100.0 7.5E-35 1.6E-39 302.9 10.0 254 470-775 558-818 (888)
348 cd06634 STKc_TAO2 Catalytic do 100.0 4E-33 8.6E-38 299.1 23.1 244 480-779 20-270 (308)
349 PLN00009 cyclin-dependent kina 100.0 3.1E-33 6.7E-38 297.9 22.1 256 480-775 7-283 (294)
350 cd06618 PKc_MKK7 Catalytic dom 100.0 2.6E-33 5.7E-38 298.8 21.5 248 478-776 18-273 (296)
351 PTZ00024 cyclin-dependent prot 100.0 4E-33 8.6E-38 302.9 22.9 260 480-776 14-313 (335)
352 cd05123 STKc_AGC Catalytic dom 100.0 2.9E-33 6.3E-38 290.4 20.5 236 483-772 1-240 (250)
353 cd05118 STKc_CMGC Catalytic do 100.0 2.4E-33 5.1E-38 296.8 19.8 255 480-775 4-279 (283)
354 cd07838 STKc_CDK4_6_like Catal 100.0 8.3E-33 1.8E-37 293.3 23.6 246 480-775 4-283 (287)
355 cd07865 STKc_CDK9 Catalytic do 100.0 5.6E-33 1.2E-37 298.1 22.4 258 480-775 17-306 (310)
356 cd05581 STKc_PDK1 Catalytic do 100.0 3.6E-33 7.9E-38 294.8 20.3 262 480-775 6-276 (280)
357 cd07855 STKc_ERK5 Catalytic do 100.0 2.1E-33 4.6E-38 304.8 19.0 259 480-776 10-294 (334)
358 cd07830 STKc_MAK_like Catalyti 100.0 7.4E-33 1.6E-37 293.2 21.9 256 480-776 4-280 (283)
359 cd07852 STKc_MAPK15 Catalytic 100.0 4.5E-33 9.7E-38 302.7 20.4 259 480-776 12-295 (337)
360 cd07854 STKc_MAPK4_6 Catalytic 100.0 2E-33 4.4E-38 305.8 16.6 261 480-780 10-306 (342)
361 cd07864 STKc_CDK12 Catalytic d 100.0 1E-32 2.2E-37 295.1 21.7 250 480-775 12-298 (302)
362 cd07858 STKc_TEY_MAPK_plant Ca 100.0 6.8E-33 1.5E-37 301.2 20.4 258 480-780 10-297 (337)
363 cd07834 STKc_MAPK Catalytic do 100.0 7.5E-33 1.6E-37 300.1 20.6 265 480-783 5-298 (330)
364 cd08222 STKc_Nek11 Catalytic d 100.0 9.1E-33 2E-37 288.7 20.4 246 480-776 5-257 (260)
365 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.4E-32 3.1E-37 297.2 21.2 257 480-782 15-296 (328)
366 cd07880 STKc_p38gamma_MAPK12 C 100.0 2.2E-32 4.9E-37 297.7 22.8 250 480-775 20-297 (343)
367 cd05576 STKc_RPK118_like Catal 100.0 7E-33 1.5E-37 285.4 17.8 220 486-771 4-224 (237)
368 cd05610 STKc_MASTL Catalytic d 100.0 2.8E-32 6.1E-37 319.9 24.8 142 480-626 9-154 (669)
369 KOG0696 Serine/threonine prote 100.0 1.2E-33 2.6E-38 286.3 11.2 235 480-768 354-593 (683)
370 cd07879 STKc_p38delta_MAPK13 C 100.0 4E-33 8.6E-38 303.6 16.1 255 480-781 20-304 (342)
371 cd07866 STKc_BUR1 Catalytic do 100.0 2.8E-32 6E-37 292.9 22.3 266 480-775 13-307 (311)
372 cd07857 STKc_MPK1 Catalytic do 100.0 3.6E-32 7.9E-37 294.9 23.4 259 480-776 5-292 (332)
373 cd07829 STKc_CDK_like Catalyti 100.0 7.8E-33 1.7E-37 292.7 17.5 255 480-775 4-278 (282)
374 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.7E-32 5.8E-37 297.3 22.2 251 480-776 22-300 (345)
375 cd07851 STKc_p38 Catalytic dom 100.0 1.7E-32 3.7E-37 298.7 19.7 250 480-775 20-297 (343)
376 KOG0612 Rho-associated, coiled 100.0 2.3E-33 4.9E-38 316.6 12.5 259 480-788 80-357 (1317)
377 KOG0603 Ribosomal protein S6 k 100.0 4.3E-33 9.4E-38 300.4 13.9 232 481-775 328-562 (612)
378 KOG0587 Traf2- and Nck-interac 100.0 1.5E-32 3.1E-37 303.6 17.8 244 480-775 24-281 (953)
379 KOG0671 LAMMER dual specificit 100.0 4.1E-33 8.9E-38 282.3 10.6 250 481-775 95-405 (415)
380 KOG0200 Fibroblast/platelet-de 100.0 5.1E-32 1.1E-36 312.8 21.2 257 478-780 299-579 (609)
381 KOG0669 Cyclin T-dependent kin 100.0 7.1E-34 1.5E-38 271.3 4.0 260 480-776 22-315 (376)
382 KOG0614 cGMP-dependent protein 100.0 2.6E-33 5.7E-38 290.9 7.1 241 482-775 427-676 (732)
383 KOG0662 Cyclin-dependent kinas 100.0 3.5E-32 7.7E-37 247.0 11.6 255 480-775 7-282 (292)
384 KOG0984 Mitogen-activated prot 100.0 3.7E-32 8.1E-37 252.7 12.0 206 470-714 41-254 (282)
385 KOG1027 Serine/threonine prote 100.0 6.5E-33 1.4E-37 305.0 7.7 249 476-775 510-766 (903)
386 KOG0608 Warts/lats-like serine 100.0 6.3E-32 1.4E-36 286.7 13.4 239 480-726 634-885 (1034)
387 KOG0695 Serine/threonine prote 100.0 6E-32 1.3E-36 267.3 12.2 243 480-768 255-502 (593)
388 KOG1151 Tousled-like protein k 100.0 3.2E-32 6.9E-37 278.1 10.0 255 480-775 468-740 (775)
389 smart00220 S_TKc Serine/Threon 100.0 8.5E-31 1.9E-35 269.7 20.6 235 487-775 1-240 (244)
390 PLN03224 probable serine/threo 100.0 9E-31 1.9E-35 291.8 20.3 260 479-775 149-499 (507)
391 PLN03225 Serine/threonine-prot 100.0 6.6E-31 1.4E-35 300.6 16.3 259 479-776 136-450 (566)
392 KOG1024 Receptor-like protein 100.0 1.1E-30 2.3E-35 263.9 12.6 258 480-783 289-558 (563)
393 KOG0664 Nemo-like MAPK-related 100.0 4E-31 8.6E-36 255.0 3.6 256 481-777 59-344 (449)
394 PLN00113 leucine-rich repeat r 100.0 2.8E-29 6E-34 310.5 20.5 224 30-264 26-254 (968)
395 KOG0670 U4/U6-associated splic 100.0 3.3E-30 7.1E-35 268.6 9.9 266 467-775 421-745 (752)
396 KOG1290 Serine/threonine prote 100.0 1.5E-28 3.2E-33 255.5 21.6 126 479-609 82-221 (590)
397 KOG0665 Jun-N-terminal kinase 100.0 8.4E-30 1.8E-34 252.5 9.5 249 482-776 24-310 (369)
398 KOG0668 Casein kinase II, alph 100.0 1.4E-29 3.1E-34 238.8 10.4 247 481-775 44-321 (338)
399 KOG1152 Signal transduction se 100.0 1.2E-29 2.5E-34 267.9 9.1 193 479-714 565-771 (772)
400 cd00180 PKc Catalytic domain o 100.0 9.6E-28 2.1E-32 240.9 21.8 211 483-777 1-215 (215)
401 KOG0576 Mitogen-activated prot 100.0 5.6E-30 1.2E-34 274.7 2.8 245 481-775 21-270 (829)
402 KOG1167 Serine/threonine prote 100.0 1.7E-28 3.6E-33 252.5 11.0 225 480-714 41-280 (418)
403 smart00221 STYKc Protein kinas 99.9 3E-26 6.4E-31 233.3 19.4 196 480-714 4-202 (225)
404 KOG1345 Serine/threonine kinas 99.9 3.6E-27 7.7E-32 228.1 8.8 256 470-777 20-285 (378)
405 PLN00181 protein SPA1-RELATED; 99.9 5.9E-26 1.3E-30 273.2 14.3 227 527-776 28-265 (793)
406 smart00750 KIND kinase non-cat 99.9 7.5E-25 1.6E-29 214.5 14.6 164 556-780 1-169 (176)
407 PRK09188 serine/threonine prot 99.9 3.4E-23 7.3E-28 221.7 14.7 133 480-628 23-164 (365)
408 KOG1164 Casein kinase (serine/ 99.9 2.8E-22 6.2E-27 215.5 18.5 261 479-780 22-297 (322)
409 KOG1165 Casein kinase (serine/ 99.9 2.1E-22 4.4E-27 200.6 14.9 204 477-716 30-240 (449)
410 KOG0590 Checkpoint kinase and 99.9 1.5E-23 3.2E-28 239.1 6.1 257 478-776 321-585 (601)
411 KOG1163 Casein kinase (serine/ 99.9 7.3E-22 1.6E-26 188.4 14.0 200 481-716 21-225 (341)
412 KOG0195 Integrin-linked kinase 99.9 1.1E-22 2.5E-27 196.7 6.5 242 482-781 197-447 (448)
413 COG0515 SPS1 Serine/threonine 99.9 1E-20 2.2E-25 203.7 22.3 257 480-776 5-275 (384)
414 cd05147 RIO1_euk RIO kinase fa 99.9 1.9E-21 4.1E-26 191.6 11.6 139 481-627 3-168 (190)
415 KOG1240 Protein kinase contain 99.9 4.6E-22 1E-26 224.9 7.7 250 479-780 27-295 (1431)
416 PRK10359 lipopolysaccharide co 99.8 6.7E-21 1.4E-25 189.5 10.4 133 479-626 35-184 (232)
417 KOG4194 Membrane glycoprotein 99.8 2.2E-22 4.7E-27 213.3 -0.3 200 88-288 252-458 (873)
418 cd05145 RIO1_like RIO kinase f 99.8 3E-20 6.6E-25 183.8 14.2 140 481-628 3-169 (190)
419 PF14531 Kinase-like: Kinase-l 99.8 7.1E-21 1.5E-25 195.0 8.3 230 480-767 17-288 (288)
420 PRK12274 serine/threonine prot 99.8 1.6E-19 3.4E-24 175.6 15.4 196 480-715 7-210 (218)
421 KOG0603 Ribosomal protein S6 k 99.8 3.5E-21 7.6E-26 208.6 2.5 225 482-770 1-232 (612)
422 PRK10345 hypothetical protein; 99.8 2.1E-19 4.5E-24 178.6 13.5 136 479-624 6-157 (210)
423 KOG4194 Membrane glycoprotein 99.8 4.4E-21 9.5E-26 203.5 0.2 211 69-280 185-403 (873)
424 KOG1023 Natriuretic peptide re 99.8 1.7E-19 3.7E-24 196.2 10.9 216 525-783 1-227 (484)
425 KOG1166 Mitotic checkpoint ser 99.8 2.3E-19 4.9E-24 208.2 11.8 203 467-711 690-902 (974)
426 PLN03150 hypothetical protein; 99.8 1.5E-18 3.3E-23 201.2 18.3 135 29-170 368-507 (623)
427 KOG4158 BRPK/PTEN-induced prot 99.8 2.7E-18 5.8E-23 175.0 11.5 201 529-777 274-511 (598)
428 KOG0444 Cytoskeletal regulator 99.8 4.1E-20 8.8E-25 197.0 -2.7 196 79-280 101-327 (1255)
429 KOG4237 Extracellular matrix p 99.8 1.1E-19 2.3E-24 185.3 0.0 221 67-288 49-365 (498)
430 KOG0617 Ras suppressor protein 99.8 5.3E-20 1.1E-24 166.9 -2.1 176 80-282 32-212 (264)
431 smart00090 RIO RIO-like kinase 99.7 7E-18 1.5E-22 172.0 12.4 140 479-628 32-200 (237)
432 KOG0444 Cytoskeletal regulator 99.7 1.4E-19 3.1E-24 192.9 -2.0 179 80-265 77-286 (1255)
433 KOG0617 Ras suppressor protein 99.7 3.9E-20 8.5E-25 167.7 -5.5 146 67-218 43-192 (264)
434 PRK14879 serine/threonine prot 99.7 2.6E-17 5.6E-22 166.2 14.4 134 481-625 2-143 (211)
435 TIGR03724 arch_bud32 Kae1-asso 99.7 2.2E-17 4.7E-22 165.1 12.4 130 482-625 1-138 (199)
436 KOG1033 eIF-2alpha kinase PEK/ 99.7 3.4E-18 7.4E-23 182.1 5.6 180 545-773 330-509 (516)
437 cd05144 RIO2_C RIO kinase fami 99.7 5.5E-17 1.2E-21 161.9 12.5 137 477-628 17-177 (198)
438 PRK09605 bifunctional UGMP fam 99.7 1.3E-16 2.8E-21 183.4 14.0 133 479-626 337-477 (535)
439 KOG0472 Leucine-rich repeat pr 99.7 3.6E-19 7.8E-24 181.5 -7.4 192 80-281 113-309 (565)
440 KOG0606 Microtubule-associated 99.7 4.2E-17 9.1E-22 185.3 6.0 212 480-768 88-304 (1205)
441 PRK01723 3-deoxy-D-manno-octul 99.7 8.2E-16 1.8E-20 157.2 14.3 140 476-626 32-192 (239)
442 cd05119 RIO RIO kinase family, 99.6 1.4E-15 3.1E-20 150.3 11.5 136 481-628 3-166 (187)
443 PRK15387 E3 ubiquitin-protein 99.6 2E-15 4.4E-20 174.7 11.4 157 106-281 283-457 (788)
444 PRK15370 E3 ubiquitin-protein 99.6 5.3E-15 1.1E-19 172.4 12.6 138 106-259 221-359 (754)
445 cd05120 APH_ChoK_like Aminogly 99.6 1.2E-14 2.7E-19 137.8 12.0 131 481-626 4-139 (155)
446 PRK15387 E3 ubiquitin-protein 99.6 7.3E-15 1.6E-19 170.1 12.3 178 81-280 222-433 (788)
447 KOG0590 Checkpoint kinase and 99.6 1.7E-16 3.6E-21 181.5 -2.1 249 482-775 27-285 (601)
448 KOG0472 Leucine-rich repeat pr 99.6 3.5E-17 7.5E-22 167.2 -7.1 193 79-279 66-285 (565)
449 PRK15370 E3 ubiquitin-protein 99.6 4.9E-15 1.1E-19 172.6 9.5 178 82-279 221-398 (754)
450 KOG4237 Extracellular matrix p 99.5 2.8E-16 6.1E-21 160.6 -3.2 197 66-263 76-363 (498)
451 KOG0618 Serine/threonine phosp 99.5 7.2E-16 1.6E-20 172.9 -1.4 196 80-283 240-490 (1081)
452 PLN03210 Resistant to P. syrin 99.5 1.8E-13 3.8E-18 170.6 17.7 198 79-281 609-837 (1153)
453 KOG0532 Leucine-rich repeat (L 99.5 9.3E-16 2E-20 163.5 -4.4 174 80-261 74-249 (722)
454 TIGR01982 UbiB 2-polyprenylphe 99.5 1.4E-13 2.9E-18 153.1 12.1 141 481-628 123-309 (437)
455 PLN03210 Resistant to P. syrin 99.4 1E-12 2.2E-17 163.8 17.0 59 80-139 633-691 (1153)
456 KOG0601 Cyclin-dependent kinas 99.4 1.4E-13 3.1E-18 150.1 8.3 257 469-775 108-378 (524)
457 cd00116 LRR_RI Leucine-rich re 99.4 1.1E-14 2.4E-19 156.9 -1.9 182 79-261 79-293 (319)
458 KOG0618 Serine/threonine phosp 99.4 1.6E-14 3.4E-19 162.3 -2.9 199 80-285 218-446 (1081)
459 cd00116 LRR_RI Leucine-rich re 99.4 4.7E-14 1E-18 152.0 -1.5 180 80-259 50-263 (319)
460 KOG1266 Protein kinase [Signal 99.3 1.7E-12 3.7E-17 130.2 7.8 206 522-776 118-331 (458)
461 cd05151 ChoK Choline Kinase (C 99.3 6E-12 1.3E-16 122.2 10.5 127 481-625 4-136 (170)
462 KOG1243 Protein kinase [Genera 99.3 3.7E-11 8E-16 132.4 16.5 166 496-709 34-200 (690)
463 PRK04750 ubiB putative ubiquin 99.3 3.2E-12 7E-17 143.5 7.8 141 481-628 125-316 (537)
464 cd05146 RIO3_euk RIO kinase fa 99.3 3E-11 6.5E-16 118.0 12.7 136 481-627 3-175 (197)
465 COG4886 Leucine-rich repeat (L 99.2 4.8E-12 1E-16 140.6 5.8 177 81-265 116-296 (394)
466 KOG0601 Cyclin-dependent kinas 99.2 9.8E-12 2.1E-16 135.9 3.9 241 481-781 271-519 (524)
467 COG3642 Mn2+-dependent serine/ 99.2 2.5E-10 5.5E-15 107.2 12.2 131 482-626 3-141 (204)
468 KOG0532 Leucine-rich repeat (L 99.2 1.3E-12 2.8E-17 139.9 -3.7 186 86-281 55-246 (722)
469 KOG3087 Serine/threonine prote 99.1 5E-10 1.1E-14 104.5 12.8 143 481-627 13-167 (229)
470 cd05154 ACAD10_11_like Acyl-Co 99.1 2.8E-10 6E-15 115.6 11.6 139 481-625 4-206 (223)
471 COG4886 Leucine-rich repeat (L 99.1 4.9E-11 1.1E-15 132.6 6.0 189 85-281 97-289 (394)
472 PLN03150 hypothetical protein; 99.1 7.2E-11 1.6E-15 137.4 7.0 89 131-219 420-511 (623)
473 PRK15123 lipopolysaccharide co 99.1 1.6E-09 3.5E-14 112.0 15.5 149 473-625 20-194 (268)
474 PF14580 LRR_9: Leucine-rich r 99.0 1.2E-10 2.7E-15 111.4 3.9 104 82-190 20-126 (175)
475 KOG0606 Microtubule-associated 99.0 7.5E-11 1.6E-15 135.2 2.7 266 483-771 812-1084(1205)
476 KOG1259 Nischarin, modulator o 99.0 2.2E-11 4.8E-16 120.6 -1.9 129 127-262 282-415 (490)
477 PF01163 RIO1: RIO1 family; I 99.0 2.1E-09 4.5E-14 104.7 11.4 126 490-627 1-157 (188)
478 KOG3741 Poly(A) ribonuclease s 99.0 7.7E-09 1.7E-13 110.7 15.1 140 488-627 289-444 (655)
479 PF14580 LRR_9: Leucine-rich r 99.0 2.6E-10 5.6E-15 109.2 3.3 86 101-191 15-102 (175)
480 KOG1259 Nischarin, modulator o 98.9 9.3E-11 2E-15 116.2 -1.5 134 102-240 281-417 (490)
481 KOG3207 Beta-tubulin folding c 98.9 2.4E-10 5.1E-15 119.3 -0.3 180 80-259 120-314 (505)
482 PF13855 LRR_8: Leucine rich r 98.8 1.5E-09 3.2E-14 85.5 2.6 59 106-164 2-60 (61)
483 PF13855 LRR_8: Leucine rich r 98.8 2.1E-09 4.6E-14 84.6 3.0 61 129-189 1-61 (61)
484 KOG0531 Protein phosphatase 1, 98.8 9E-10 2E-14 122.7 1.1 172 80-260 94-269 (414)
485 COG0478 RIO-like serine/threon 98.8 3.6E-08 7.7E-13 98.4 12.0 138 476-627 92-253 (304)
486 KOG3207 Beta-tubulin folding c 98.8 8E-10 1.7E-14 115.4 -1.0 155 80-234 145-314 (505)
487 PF08263 LRRNT_2: Leucine rich 98.8 5.4E-09 1.2E-13 75.4 3.6 41 32-72 2-43 (43)
488 PF06293 Kdo: Lipopolysacchari 98.7 9.9E-08 2.2E-12 95.5 12.1 106 516-626 56-171 (206)
489 KOG0531 Protein phosphatase 1, 98.7 2.5E-09 5.5E-14 119.2 -1.7 172 80-261 71-247 (414)
490 KOG2137 Protein kinase [Signal 98.6 6.8E-09 1.5E-13 115.3 1.3 158 582-775 105-264 (700)
491 COG4248 Uncharacterized protei 98.6 5E-07 1.1E-11 94.6 14.7 260 480-783 16-303 (637)
492 PRK09902 hypothetical protein; 98.6 9.8E-07 2.1E-11 86.5 14.2 137 484-625 27-179 (216)
493 COG0661 AarF Predicted unusual 98.5 5.6E-07 1.2E-11 100.8 12.5 150 471-628 120-317 (517)
494 KOG1859 Leucine-rich repeat pr 98.5 4.7E-09 1E-13 115.6 -5.3 128 129-260 164-293 (1096)
495 KOG1909 Ran GTPase-activating 98.5 1.8E-08 3.9E-13 102.8 -1.6 176 82-258 93-310 (382)
496 KOG4579 Leucine-rich repeat (L 98.4 8.9E-09 1.9E-13 91.1 -4.7 128 81-212 27-160 (177)
497 KOG1859 Leucine-rich repeat pr 98.4 1.7E-08 3.7E-13 111.3 -4.1 180 98-285 102-295 (1096)
498 TIGR02172 Fb_sc_TIGR02172 Fibr 98.4 4.9E-06 1.1E-10 84.4 13.1 139 481-625 7-182 (226)
499 COG1718 RIO1 Serine/threonine 98.3 4.8E-06 1E-10 82.7 11.6 137 482-628 55-218 (268)
500 PF06176 WaaY: Lipopolysacchar 98.3 7.4E-06 1.6E-10 80.6 11.7 130 481-625 37-183 (229)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.4e-64 Score=624.46 Aligned_cols=537 Identities=28% Similarity=0.494 Sum_probs=353.1
Q ss_pred CCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEe
Q 003847 80 DSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLN 159 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 159 (791)
..+++.|+|++|++++.+|..|..++.|+.|+|++|++++.+|..+..+++|+.|+|++|++.+.+|..+ .+++|+.|+
T Consensus 403 ~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ 481 (968)
T PLN00113 403 CRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLD 481 (968)
T ss_pred CCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEE
Confidence 3445555555555555555555555555555555555555555555555666666666666655555544 345667777
Q ss_pred CcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC---cccceeccccccccccCCCCcCC-ccccEEEccCCcCcc
Q 003847 160 LSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSG 235 (791)
Q Consensus 160 ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g 235 (791)
|++|++++.+|..|.++++|+.|+|++|++.+.+|..+ ++|++|+|++|.+++.+|..+.. .+|+.|+|++|+++|
T Consensus 482 ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 561 (968)
T PLN00113 482 LSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSG 561 (968)
T ss_pred CcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccc
Confidence 77777777777777777778888888887777777654 67778888888888777777766 478888888888888
Q ss_pred cCchhHhhcCCCCcEEEcccCcCcccCCCCCcccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccC
Q 003847 236 EIPPQFGEKIPVNATIDLSFNNLTGEIPESNVFMNQESSSFSGNLDLCGQPTKNPCPIPSSPFDLPNTTAPTSPPAIAAI 315 (791)
Q Consensus 236 ~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~c~~~~~~~~~~~~~~~~~p~~~~~~ 315 (791)
.+|..+.. +++|+.|++++|+++|.+|....+..+....+.||+.+|+...... .
T Consensus 562 ~~p~~l~~-l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~------------------------~ 616 (968)
T PLN00113 562 EIPKNLGN-VESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSG------------------------L 616 (968)
T ss_pred cCChhHhc-CcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccC------------------------C
Confidence 88877766 7788888888888888888777777777777788888876321100 0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccEEEeehHHHHHHHHHHHHHhhheeecccccchhhhHhhhcccCCCCCC
Q 003847 316 PKSIDSTPATNPDDGSVSKPRQEGSQGLRPGTIIGIVIGDIAGIGILAVVFFYVYRLIKRKNVESTLKKEANSAKDTVSF 395 (791)
Q Consensus 316 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ii~iv~g~~~~i~l~~~v~~~~~~~~~rr~~~~~~~~~~~~~~~~~~~ 395 (791)
++ +.. ..+ ....++ ++++++++++++++++++++++++|++.... +.+
T Consensus 617 ~~-------------c~~-----~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---------- 664 (968)
T PLN00113 617 PP-------------CKR-----VRK--TPSWWF-YITCTLGAFLVLALVAFGFVFIRGRNNLELK-RVE---------- 664 (968)
T ss_pred CC-------------Ccc-----ccc--cceeee-ehhHHHHHHHHHHHHHHHHHHHHhhhccccc-ccc----------
Confidence 00 000 000 111122 2222222222222222222222222111000 000
Q ss_pred CCCCCCCCcCCCccccccccCCCCCCCCCCcccccccccccCCccccchhhhhhhhhhhcccCccEEEecCCcccchHHH
Q 003847 396 SPSSSSSESRGFTRWSCLRKRGDGDEESDASVSDVEDNYHSGRKLSVDNQRQQDHVHERQNKKGTLVIVDGDKELELETL 475 (791)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (791)
. ..+ .|. ..... . .....+.++++
T Consensus 665 ~------~~~---~~~--------------------~~~~~-~--------------------------~~~~~~~~~~~ 688 (968)
T PLN00113 665 N------EDG---TWE--------------------LQFFD-S--------------------------KVSKSITINDI 688 (968)
T ss_pred c------ccc---ccc--------------------ccccc-c--------------------------ccchhhhHHHH
Confidence 0 000 000 00000 0 00011222222
Q ss_pred hh--hcceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEec
Q 003847 476 LK--ASAYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDF 552 (791)
Q Consensus 476 ~~--~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 552 (791)
.. ....+||+|+||.||+|+. .+++.||||++...... ...|++++++++|||||+++++|.+.+..|+||||
T Consensus 689 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey 764 (968)
T PLN00113 689 LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEY 764 (968)
T ss_pred HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeC
Confidence 22 2346899999999999995 57899999998754322 23468899999999999999999999999999999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHh---cCCCeecCCCCCCeEecCCCCeEEeccCcccccCCC
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLH---EKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGD 629 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH---~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 629 (791)
+++|+|.++++. ++|..+.+|+.|+++||+||| +.+|+||||||+||+++.++.+++. ||........
T Consensus 765 ~~~g~L~~~l~~--------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~ 835 (968)
T PLN00113 765 IEGKNLSEVLRN--------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD 835 (968)
T ss_pred CCCCcHHHHHhc--------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC
Confidence 999999999852 889999999999999999999 6799999999999999999888875 6554332110
Q ss_pred CCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCC
Q 003847 630 TSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~ 709 (791)
....||+.|+|||++.+..++.++|||||||++|||+||+
T Consensus 836 ----------------------------------------~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~ 875 (968)
T PLN00113 836 ----------------------------------------TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGK 875 (968)
T ss_pred ----------------------------------------CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCC
Confidence 0124788999999999999999999999999999999999
Q ss_pred cchhccccCCCCcchh------chhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCC
Q 003847 710 VIVVDELGQGNGLLVE------DKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSS 783 (791)
Q Consensus 710 ~pf~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 783 (791)
.||........ .... .......+.++.+........++..++.+++.+||+.||++||+|+||+++|+++...
T Consensus 876 ~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~ 954 (968)
T PLN00113 876 SPADAEFGVHG-SIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRS 954 (968)
T ss_pred CCCCcccCCCC-cHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence 99854322111 0100 0011122334444333333445677889999999999999999999999999998654
Q ss_pred C
Q 003847 784 P 784 (791)
Q Consensus 784 ~ 784 (791)
.
T Consensus 955 ~ 955 (968)
T PLN00113 955 S 955 (968)
T ss_pred c
Confidence 3
No 2
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-47 Score=410.13 Aligned_cols=245 Identities=24% Similarity=0.370 Sum_probs=216.9
Q ss_pred hcceeccccCceEEEEEEe-CCCcEEEEEEcCCC---chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEecc
Q 003847 478 ASAYILGASGSSIMYKAVL-EDGTALAVRRIGEN---SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
..+.+||+|||+.||+++. .+|+.||+|++.+. .....+.+.+||+|.++|+|||||+++++|++.+..|||.|+|
T Consensus 21 ~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC 100 (592)
T KOG0575|consen 21 KRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELC 100 (592)
T ss_pred eeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEec
Confidence 3467999999999999996 89999999999763 3334578899999999999999999999999999999999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
+.++|..+++++. ++++.+++.+++||+.||.|||+.+|+|||||..|+|++++.++||+|||+|..+..+..
T Consensus 101 ~~~sL~el~Krrk-----~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~E-- 173 (592)
T KOG0575|consen 101 HRGSLMELLKRRK-----PLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGE-- 173 (592)
T ss_pred CCccHHHHHHhcC-----CCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCccc--
Confidence 9999999887543 499999999999999999999999999999999999999999999999999998874422
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
.....||||.|+|||++.....+..+||||+|||+|.|++|++||.
T Consensus 174 ----------------------------------rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFe 219 (592)
T KOG0575|consen 174 ----------------------------------RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFE 219 (592)
T ss_pred ----------------------------------ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcc
Confidence 2346789999999999999999999999999999999999999996
Q ss_pred ccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 714 DELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
.. .+.+..+......+..+...+.+..+||.++|+.||.+|||+++|+..
T Consensus 220 tk-------------~vkety~~Ik~~~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 220 TK-------------TVKETYNKIKLNEYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred cc-------------hHHHHHHHHHhcCcccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 54 345555555566666666678889999999999999999999999864
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-47 Score=411.52 Aligned_cols=274 Identities=38% Similarity=0.641 Sum_probs=225.9
Q ss_pred cccchHHHhhhc-----ceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEc
Q 003847 468 KELELETLLKAS-----AYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG 542 (791)
Q Consensus 468 ~~~~~~~~~~~~-----~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 542 (791)
+.|.++++..++ .++||+|+||.||+|...+|+.||||++........++|.+|++++.+++|||+|+++|||.+
T Consensus 63 ~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e 142 (361)
T KOG1187|consen 63 RSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLE 142 (361)
T ss_pred ceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEec
Confidence 456777777665 479999999999999999999999999877544314569999999999999999999999999
Q ss_pred cC-ceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC---CCeecCCCCCCeEecCCCCeEEe
Q 003847 543 VD-EKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK---KHVHGNLKPRNVLLGNDMEPKIG 618 (791)
Q Consensus 543 ~~-~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~---~ivHrDlkp~NILl~~~~~~kL~ 618 (791)
.+ +.+||||||++|+|.++++..... +++|..+.+||.++|+||+|||+. .||||||||+|||+|+++++||+
T Consensus 143 ~~~~~~LVYEym~nGsL~d~L~~~~~~---~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKls 219 (361)
T KOG1187|consen 143 GGEHRLLVYEYMPNGSLEDHLHGKKGE---PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLS 219 (361)
T ss_pred CCceEEEEEEccCCCCHHHHhCCCCCC---CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEcc
Confidence 98 499999999999999999886543 499999999999999999999983 59999999999999999999999
Q ss_pred ccCcccccCC-CCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCC-CCCCcccCcccccCCCCCCchhhH
Q 003847 619 DFGLERLVTG-DTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSL-GGISPYHAPESLRSIKPNPKWDVY 696 (791)
Q Consensus 619 DFGla~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gt~~y~APE~~~~~~~~~~sDvw 696 (791)
|||+|+.... .... ... .||.+|+|||++..+..+.|+|||
T Consensus 220 DFGLa~~~~~~~~~~-------------------------------------~~~~~gt~gY~~PEy~~~g~lt~KsDVy 262 (361)
T KOG1187|consen 220 DFGLAKLGPEGDTSV-------------------------------------STTVMGTFGYLAPEYASTGKLTEKSDVY 262 (361)
T ss_pred CccCcccCCccccce-------------------------------------eeecCCCCccCChhhhccCCcCcccccc
Confidence 9999965432 1100 011 599999999999999999999999
Q ss_pred HHHHHHHHHHhCCcchhccc-------cCCCCcchhchhHHHHHHHHhhh-cCccchHHHHHHHHHHHhhccCCCCCCCC
Q 003847 697 SFGVILLELLTGKVIVVDEL-------GQGNGLLVEDKNRAIRLADAAIR-ADFEGKEEALLSCFKLGYSCASPLPQKRP 768 (791)
Q Consensus 697 SlGvil~elltG~~pf~~~~-------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RP 768 (791)
||||+++||+||+.+.+... ..|....+.+. ...+++|+.+. +.+... +....+..++.+|++.+|++||
T Consensus 263 SFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~-~~~eiiD~~l~~~~~~~~-~~~~~~~~~a~~C~~~~~~~RP 340 (361)
T KOG1187|consen 263 SFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEG-KLREIVDPRLKEGEYPDE-KEVKKLAELALRCLRPDPKERP 340 (361)
T ss_pred cchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCc-chhheeCCCccCCCCChH-HHHHHHHHHHHHHcCcCCCcCc
Confidence 99999999999998765432 12332233333 56777888776 333321 4778899999999999999999
Q ss_pred CHHHHHHHhccCCCC
Q 003847 769 SMKEALQALEKIPSS 783 (791)
Q Consensus 769 s~~evl~~L~~i~~~ 783 (791)
+|.||+++|+.+...
T Consensus 341 ~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 341 TMSQVVKELEGILSL 355 (361)
T ss_pred CHHHHHHHHHhhccc
Confidence 999999999776543
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-47 Score=384.16 Aligned_cols=254 Identities=27% Similarity=0.371 Sum_probs=211.2
Q ss_pred cchHHHhhhcceeccccCceEEEEEEeC-CCcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEccC-ce
Q 003847 470 LELETLLKASAYILGASGSSIMYKAVLE-DGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVD-EK 546 (791)
Q Consensus 470 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-~~ 546 (791)
+.+.++.+ ...||+|..|+|||++++ +++.+|+|.+... .....+++.+|++++++.+|||||++||.|+.++ ..
T Consensus 76 i~~~dle~--~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~i 153 (364)
T KOG0581|consen 76 ISLSDLER--LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEI 153 (364)
T ss_pred cCHHHhhh--hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceE
Confidence 33444433 358999999999999964 6899999999554 4445678999999999999999999999999999 49
Q ss_pred EEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCeecCCCCCCeEecCCCCeEEeccCcccc
Q 003847 547 LIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE-KKHVHGNLKPRNVLLGNDMEPKIGDFGLERL 625 (791)
Q Consensus 547 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 625 (791)
.|+||||++|+|++++...+ .+++....+|+.+|++||.|||+ ++||||||||+|||++..|++||||||.++.
T Consensus 154 sI~mEYMDgGSLd~~~k~~g-----~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~ 228 (364)
T KOG0581|consen 154 SICMEYMDGGSLDDILKRVG-----RIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGI 228 (364)
T ss_pred EeehhhcCCCCHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHH
Confidence 99999999999999887764 39999999999999999999996 9999999999999999999999999999987
Q ss_pred cCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHH
Q 003847 626 VTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLEL 705 (791)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~el 705 (791)
+... ...+++||..|||||.+.+..|+.++||||||++++|+
T Consensus 229 lvnS--------------------------------------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~ 270 (364)
T KOG0581|consen 229 LVNS--------------------------------------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLEL 270 (364)
T ss_pred hhhh--------------------------------------hcccccccccccChhhhcCCcCCcccceecccHHHHHH
Confidence 7533 12356699999999999999999999999999999999
Q ss_pred HhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCcc-chH-HHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 706 LTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFE-GKE-EALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 706 ltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
++|+.||......+ ....++++....+..+ .+. ..+.++.+|+..||++||.+||+++|+++.
T Consensus 271 a~GrfP~~~~~~~~--------~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 271 AIGRFPYPPPNPPY--------LDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred hhCCCCCCCcCCCC--------CCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 99999986541111 1234444444443222 122 267889999999999999999999999864
No 5
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.1e-47 Score=388.36 Aligned_cols=243 Identities=26% Similarity=0.406 Sum_probs=202.9
Q ss_pred cceeccccCceEEEEEE-eCCCcEEEEEEcCCCch-------hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEE
Q 003847 479 SAYILGASGSSIMYKAV-LEDGTALAVRRIGENSV-------DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIY 550 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 550 (791)
..+.||+|+||.|-+|. .++|+.||||++++... ......++|+++|++|+|||||+++++|...+..|+||
T Consensus 176 i~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVl 255 (475)
T KOG0615|consen 176 ISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVL 255 (475)
T ss_pred eeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEE
Confidence 45789999999999998 67899999999976421 12345689999999999999999999999999999999
Q ss_pred eccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCC---CCeEEeccCcccccC
Q 003847 551 DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGND---MEPKIGDFGLERLVT 627 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~---~~~kL~DFGla~~~~ 627 (791)
||++||+|.+.+-.+.. +.+..-+.+++|++.|+.|||++||+||||||+|||+..+ ..+||+|||+|+...
T Consensus 256 E~v~GGeLfd~vv~nk~-----l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g 330 (475)
T KOG0615|consen 256 EYVEGGELFDKVVANKY-----LREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSG 330 (475)
T ss_pred EEecCccHHHHHHhccc-----cccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccc
Confidence 99999999999887653 7888889999999999999999999999999999999765 679999999999865
Q ss_pred CCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCC---CCchhhHHHHHHHHH
Q 003847 628 GDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKP---NPKWDVYSFGVILLE 704 (791)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~---~~~sDvwSlGvil~e 704 (791)
.. ..+..+|||+.|.|||++.+..+ ..++|+||+|||+|-
T Consensus 331 ~~-------------------------------------sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfv 373 (475)
T KOG0615|consen 331 EG-------------------------------------SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFV 373 (475)
T ss_pred cc-------------------------------------eehhhhcCCccccChhheecCCeecccchheeeeccceEEE
Confidence 21 23557899999999999976543 348899999999999
Q ss_pred HHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCc----cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 705 LLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADF----EGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 705 lltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
+++|.+||.+...+. .+.+....+.+ ..+.+...+..+||.+||..||++|||+.|+++
T Consensus 374 cLsG~pPFS~~~~~~------------sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 374 CLSGYPPFSEEYTDP------------SLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred EeccCCCcccccCCc------------cHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 999999998764432 11222223322 234456788999999999999999999999985
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-46 Score=381.31 Aligned_cols=192 Identities=29% Similarity=0.475 Sum_probs=174.3
Q ss_pred eccccCceEEEEEEe-CCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 482 ILGASGSSIMYKAVL-EDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
.||+|+|++||+|++ +++..||||.+.+. .....+.+..|+++|+.++|||||+++++++.++..|+|||||.||+|
T Consensus 17 ~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~gGDL 96 (429)
T KOG0595|consen 17 EIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNGGDL 96 (429)
T ss_pred hccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCCCCH
Confidence 499999999999994 56899999999776 555567789999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCC------CCeEEeccCcccccCCCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGND------MEPKIGDFGLERLVTGDTSS 632 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~------~~~kL~DFGla~~~~~~~~~ 632 (791)
.++++.++. +++.+++.++.|+|.||++||+++||||||||+|||++.. -.+||+|||+|+.+....
T Consensus 97 s~yi~~~~~-----l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~-- 169 (429)
T KOG0595|consen 97 SDYIRRRGR-----LPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGS-- 169 (429)
T ss_pred HHHHHHcCC-----CCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchh--
Confidence 999998763 9999999999999999999999999999999999999764 458999999999886332
Q ss_pred CcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcch
Q 003847 633 SKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIV 712 (791)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf 712 (791)
.....||++.|||||++..++|+.|+|+||+|+|+|+|++|+.||
T Consensus 170 -----------------------------------~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf 214 (429)
T KOG0595|consen 170 -----------------------------------MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPF 214 (429)
T ss_pred -----------------------------------HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCc
Confidence 234678999999999999999999999999999999999999999
Q ss_pred hcc
Q 003847 713 VDE 715 (791)
Q Consensus 713 ~~~ 715 (791)
...
T Consensus 215 ~a~ 217 (429)
T KOG0595|consen 215 DAE 217 (429)
T ss_pred ccc
Confidence 743
No 7
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-45 Score=391.78 Aligned_cols=251 Identities=31% Similarity=0.451 Sum_probs=207.9
Q ss_pred eeccccCceEEEEEEeCCCcEEEEEEcCCCchh--hHHHHHHHHHHHhccCCCCccceeeEEEccC-ceEEEEeccCCCC
Q 003847 481 YILGASGSSIMYKAVLEDGTALAVRRIGENSVD--RFRDFETQVRVIAKLVHPNLVRIRGFYWGVD-EKLIIYDFVPNGS 557 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-~~~lv~e~~~~gs 557 (791)
+.||+|+||+||+|.+.....||||++...... ..++|.+|+.+|.+++|||||+++|++.+.. ..++||||+++|+
T Consensus 47 ~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~Gs 126 (362)
T KOG0192|consen 47 EVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGS 126 (362)
T ss_pred hhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCc
Confidence 349999999999999975455999999764322 2568999999999999999999999999887 7999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-CeecCCCCCCeEecCCC-CeEEeccCcccccCCCCCCCcC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKK-HVHGNLKPRNVLLGNDM-EPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~-ivHrDlkp~NILl~~~~-~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|.++++.... ..+++..+.+|+.|||+||+|||+.+ ||||||||+|||++.++ ++||+|||+++......
T Consensus 127 L~~~l~~~~~---~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~----- 198 (362)
T KOG0192|consen 127 LSVLLHKKRK---RKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK----- 198 (362)
T ss_pred HHHHHhhccc---CCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc-----
Confidence 9999988511 24999999999999999999999999 99999999999999997 99999999998765321
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc--CCCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR--SIKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~--~~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
...+...||+.|||||++. ...|+.|+||||||+++|||+||+.||.
T Consensus 199 -------------------------------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~ 247 (362)
T KOG0192|consen 199 -------------------------------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFE 247 (362)
T ss_pred -------------------------------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCC
Confidence 1122345999999999999 5689999999999999999999999997
Q ss_pred ccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 714 DELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
+... ......+.....+...+. .....+..++.+||+.||++||++.+++..|+.+.
T Consensus 248 ~~~~---------~~~~~~v~~~~~Rp~~p~--~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~ 304 (362)
T KOG0192|consen 248 DLAP---------VQVASAVVVGGLRPPIPK--ECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIM 304 (362)
T ss_pred CCCH---------HHHHHHHHhcCCCCCCCc--cCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHH
Confidence 6421 112223333333333332 26778889999999999999999999999998764
No 8
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.6e-46 Score=363.63 Aligned_cols=250 Identities=23% Similarity=0.340 Sum_probs=207.8
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceee-EEEccCc-eEEEEeccC
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRG-FYWGVDE-KLIIYDFVP 554 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~-~~~~~~~-~~lv~e~~~ 554 (791)
.+.||+|.||.|||+. ..+|..||.|.++-. +....++...|+.+|++|+|||||++++ .+.++.+ .+||||||.
T Consensus 24 l~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~ 103 (375)
T KOG0591|consen 24 LKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCD 103 (375)
T ss_pred HHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhc
Confidence 3589999999999999 678999999999754 3344567889999999999999999999 4444555 789999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc--CC--CeecCCCCCCeEecCCCCeEEeccCcccccCCCC
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE--KK--HVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~--~~--ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 630 (791)
.|+|.+.++...... ..+++..+++++.|++.||.++|. .+ |+||||||.||+++.+|.+||+|||+++.+....
T Consensus 104 ~GDLsqmIk~~K~qk-r~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~ 182 (375)
T KOG0591|consen 104 AGDLSQMIKHFKKQK-RLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKT 182 (375)
T ss_pred ccCHHHHHHHHHhcc-ccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchh
Confidence 999999987655433 359999999999999999999999 56 9999999999999999999999999999876432
Q ss_pred CCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCc
Q 003847 631 SSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~ 710 (791)
. ...+++|||.||+||.+.+.+|++|+||||+||++|||..-++
T Consensus 183 t------------------------------------fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~ 226 (375)
T KOG0591|consen 183 T------------------------------------FAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQS 226 (375)
T ss_pred H------------------------------------HHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCC
Confidence 2 2346789999999999999999999999999999999999999
Q ss_pred chhccccCCCCcchhchhHHHHHHHHhhhcCcc-ch-HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhcc
Q 003847 711 IVVDELGQGNGLLVEDKNRAIRLADAAIRADFE-GK-EEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779 (791)
Q Consensus 711 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 779 (791)
||.++ ....+-...-.++++ .+ .-.+..+..||..|+..||+.||+...++..+..
T Consensus 227 PF~g~-------------n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 227 PFYGD-------------NLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred Ccccc-------------cHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 99775 123333444445554 22 4467889999999999999999996665555543
No 9
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-44 Score=365.36 Aligned_cols=235 Identities=20% Similarity=0.299 Sum_probs=200.7
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCCch---hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGENSV---DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
-++||+|+||.||.++ .++++.+|+|++++... ...+....|..+|.+++||.||+++-.|++.+..|+|+||+.|
T Consensus 30 lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~~G 109 (357)
T KOG0598|consen 30 LKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYLNG 109 (357)
T ss_pred eeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEeccCC
Confidence 4689999999999999 45699999999987522 3356788999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|.|...+.+.+. +++..++-++..|+.||.|||+.|||||||||+|||+|.+|.++|+|||+++......
T Consensus 110 GeLf~hL~~eg~-----F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~----- 179 (357)
T KOG0598|consen 110 GELFYHLQREGR-----FSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDG----- 179 (357)
T ss_pred ccHHHHHHhcCC-----cchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCC-----
Confidence 999999887653 9999999999999999999999999999999999999999999999999998643221
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
.....+|||+.|||||++.+..|+.++|.||+|+++|||++|.+||...
T Consensus 180 -------------------------------~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~ 228 (357)
T KOG0598|consen 180 -------------------------------DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAE 228 (357)
T ss_pred -------------------------------CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCc
Confidence 1234578999999999999999999999999999999999999999764
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHH-HHHHHHHHHhhccCCCCCCCC
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEE-ALLSCFKLGYSCASPLPQKRP 768 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~RP 768 (791)
. ...+.+............ ...+..+++.+++..||++|.
T Consensus 229 ~-------------~~~~~~~I~~~k~~~~p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 229 D-------------VKKMYDKILKGKLPLPPGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred c-------------HHHHHHHHhcCcCCCCCccCCHHHHHHHHHHhccCHHHhc
Confidence 2 234444444444222222 566788999999999999996
No 10
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-44 Score=375.49 Aligned_cols=257 Identities=21% Similarity=0.285 Sum_probs=215.2
Q ss_pred cceeccccCceEEEEEE-eCCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEecc
Q 003847 479 SAYILGASGSSIMYKAV-LEDGTALAVRRIGENS---VDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
++++||+|+|++||+|+ .++++.||||++.+.. ....+-+..|-.+|.+| .||.|++|+..|.++...|+|+||+
T Consensus 77 Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A 156 (604)
T KOG0592|consen 77 FGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYA 156 (604)
T ss_pred hhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEec
Confidence 35799999999999999 6689999999997642 22234567888899999 8999999999999999999999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
++|+|.++|.+.+. +++...+.++.||+.||+|||++|||||||||+|||+|++|++||+|||.|+.+.+.....
T Consensus 157 ~nGdll~~i~K~Gs-----fde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~ 231 (604)
T KOG0592|consen 157 PNGDLLDLIKKYGS-----FDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQ 231 (604)
T ss_pred CCCcHHHHHHHhCc-----chHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhccc
Confidence 99999999998753 9999999999999999999999999999999999999999999999999999987554332
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
..+. ..........+++||..|.+||++.+...++.+|+|+||||+|+|+.|++||.
T Consensus 232 ~~~~-----------------------~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFr 288 (604)
T KOG0592|consen 232 ENPV-----------------------DPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFR 288 (604)
T ss_pred cCcc-----------------------CcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCc
Confidence 1100 00011112456889999999999999999999999999999999999999996
Q ss_pred ccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 714 DELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
+.. -..++...+.-.++.++..++.+.+|+.+.|..||.+|+++++|.+.
T Consensus 289 a~N-------------eyliFqkI~~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 289 AAN-------------EYLIFQKIQALDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred ccc-------------HHHHHHHHHHhcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 541 23445555555666666667788999999999999999999888764
No 11
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-44 Score=381.72 Aligned_cols=256 Identities=29% Similarity=0.421 Sum_probs=211.8
Q ss_pred hhcceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 477 KASAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 477 ~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
......||+|-||.||.|.+.....||+|.++..... .+.|.+|+++|++|+|+|||+++++|..++.+|||||||+.|
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~-~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~G 286 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMS-PEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKG 286 (468)
T ss_pred HHHHHHhcCCccceEEEEEEcCCCcccceEEeccccC-hhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccC
Confidence 3345679999999999999988889999999876433 378899999999999999999999999989999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++....+. .+...+.+.++.|||+|++||+++++|||||...||||+++..+||+|||+|+.+..+......+
T Consensus 287 sLl~yLr~~~~~---~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~ 363 (468)
T KOG0197|consen 287 SLLDYLRTREGG---LLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEG 363 (468)
T ss_pred cHHHHhhhcCCC---ccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCceeecCC
Confidence 999999873332 48899999999999999999999999999999999999999999999999999665444332221
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhcc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDE 715 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~ 715 (791)
.. -...|.|||.+...+++.|||||||||+||||+| |+.||...
T Consensus 364 ~k-----------------------------------fPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~m 408 (468)
T KOG0197|consen 364 GK-----------------------------------FPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGM 408 (468)
T ss_pred CC-----------------------------------CCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCC
Confidence 11 1234999999999999999999999999999999 66677543
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhc-CccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCCC
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRA-DFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSSP 784 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 784 (791)
. ..+++...-.+ .++.+..++..+.+++..||+.+|++|||++.+...|+++....
T Consensus 409 s-------------n~ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~ 465 (468)
T KOG0197|consen 409 S-------------NEEVLELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTST 465 (468)
T ss_pred C-------------HHHHHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhcc
Confidence 1 12222222111 23445558889999999999999999999999999999887644
No 12
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-44 Score=377.41 Aligned_cols=245 Identities=23% Similarity=0.358 Sum_probs=211.9
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
...||+|+.|.||.|+ ..+++.||||++........+-+.+|+.+|+..+|+|||.+++.|...++.|+|||||+||+|
T Consensus 278 ~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsL 357 (550)
T KOG0578|consen 278 FKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSL 357 (550)
T ss_pred hhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCch
Confidence 4579999999999998 667899999999887777777889999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+.+.... +++.++..|++++++||+|||.+||+|||||.+|||++.+|.+||+|||+|..+.....
T Consensus 358 TDvVt~~~------~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~------- 424 (550)
T KOG0578|consen 358 TDVVTKTR------MTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS------- 424 (550)
T ss_pred hhhhhccc------ccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccC-------
Confidence 99988764 99999999999999999999999999999999999999999999999999987754321
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccccC
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQ 718 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~ 718 (791)
.....+||++|||||++....|++|+||||||++++||+-|++||..+..
T Consensus 425 -----------------------------KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~P- 474 (550)
T KOG0578|consen 425 -----------------------------KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENP- 474 (550)
T ss_pred -----------------------------ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCCh-
Confidence 23456799999999999999999999999999999999999999965321
Q ss_pred CCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 719 GNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
+ ....++.......+...+..+..+.+|+.+||..|+++|+++.|+|+.
T Consensus 475 -----l----rAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 475 -----L----RALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred -----H----HHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 1 112222222333444555678899999999999999999999999874
No 13
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=2.9e-43 Score=369.11 Aligned_cols=241 Identities=23% Similarity=0.334 Sum_probs=211.5
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
-+.||+|.||.||||+ ..+.+.||+|.+.+. ...+.+.+.+|++|+++++|||||.++++|+...+.++|+||+.|
T Consensus 7 ~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g- 85 (808)
T KOG0597|consen 7 YEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG- 85 (808)
T ss_pred HHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh-
Confidence 4589999999999999 457899999999764 334567899999999999999999999999999999999999976
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|..++..... ++++.+..|+.|++.||.|||+.+|+|||+||.|||++..|.+|++|||+|+.+.....
T Consensus 86 ~L~~il~~d~~-----lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~----- 155 (808)
T KOG0597|consen 86 DLFTILEQDGK-----LPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTS----- 155 (808)
T ss_pred hHHHHHHhccC-----CCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCce-----
Confidence 99999987653 99999999999999999999999999999999999999999999999999998764221
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
..+.+.|||.|||||.+.++.|+..+|+||+|||+||+++|++||...
T Consensus 156 -------------------------------vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~- 203 (808)
T KOG0597|consen 156 -------------------------------VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR- 203 (808)
T ss_pred -------------------------------eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH-
Confidence 234566999999999999999999999999999999999999999653
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
.+.+++..+.......+......+..|+...+.+||.+|.+..+++.
T Consensus 204 ------------si~~Lv~~I~~d~v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 204 ------------SITQLVKSILKDPVKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred ------------HHHHHHHHHhcCCCCCcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 34556666666555555567888999999999999999999999875
No 14
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-43 Score=362.38 Aligned_cols=253 Identities=27% Similarity=0.414 Sum_probs=201.0
Q ss_pred cceeccccCceEEEEEEeC-CCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccC--ceEEEEeccCC
Q 003847 479 SAYILGASGSSIMYKAVLE-DGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVD--EKLIIYDFVPN 555 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~--~~~lv~e~~~~ 555 (791)
..+.||+|+||.||++... +|+..|||.+........+.+++|+++|++++|||||+++|.....+ .++++|||+++
T Consensus 21 ~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~ 100 (313)
T KOG0198|consen 21 KGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPG 100 (313)
T ss_pred hhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCC
Confidence 3568999999999999954 59999999997764444677999999999999999999999865555 58999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecC-CCCeEEeccCcccccCCCCCCCc
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN-DMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~-~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
|+|.+++...++ .+++..++.+++||++||+|||++|||||||||+|||++. ++.+||+|||+++........
T Consensus 101 GsL~~~~~~~g~----~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~-- 174 (313)
T KOG0198|consen 101 GSLSDLIKRYGG----KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTK-- 174 (313)
T ss_pred CcHHHHHHHcCC----CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccccccc--
Confidence 999999988764 2999999999999999999999999999999999999999 799999999999876531100
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC-CCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI-KPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
........||+.|||||++..+ ...+++|||||||++.||+||+.||.
T Consensus 175 -------------------------------~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~ 223 (313)
T KOG0198|consen 175 -------------------------------SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWS 223 (313)
T ss_pred -------------------------------ccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcch
Confidence 0112235599999999999953 33459999999999999999999996
Q ss_pred ccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhc
Q 003847 714 DELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALE 778 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 778 (791)
+.. ........+......+ ..+...+....+|+.+|+..||++||||.++++.--
T Consensus 224 ~~~--------~~~~~~~~ig~~~~~P--~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf 278 (313)
T KOG0198|consen 224 EFF--------EEAEALLLIGREDSLP--EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPF 278 (313)
T ss_pred hhc--------chHHHHHHHhccCCCC--CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChh
Confidence 530 0011111111111111 222336678899999999999999999999998753
No 15
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2.2e-42 Score=338.20 Aligned_cols=254 Identities=19% Similarity=0.283 Sum_probs=194.8
Q ss_pred eeccccCceEEEEEE-eCCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 481 YILGASGSSIMYKAV-LEDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
-.+|+|+||+|||++ .++|+.||||++.+. .+...+-..+|+++|++++|+|+|.++++|......++|+|||+..-
T Consensus 8 gkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dhTv 87 (396)
T KOG0593|consen 8 GKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDHTV 87 (396)
T ss_pred hccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecchHH
Confidence 478999999999999 457999999999664 34445667899999999999999999999999999999999997644
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
| +-+.+... .++.+.++++++|++.|+.|+|++++|||||||+|||++.+|.+||||||+|+.+....
T Consensus 88 L-~eLe~~p~----G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg------- 155 (396)
T KOG0593|consen 88 L-HELERYPN----GVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPG------- 155 (396)
T ss_pred H-HHHHhccC----CCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCc-------
Confidence 4 44554433 28999999999999999999999999999999999999999999999999999876321
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
...+.++.|.-|+|||.+.+ .+|+..+||||+||++.||++|.+.|.+..
T Consensus 156 -----------------------------d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~S 206 (396)
T KOG0593|consen 156 -----------------------------DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRS 206 (396)
T ss_pred -----------------------------chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcc
Confidence 12334567888999999987 789999999999999999999999886643
Q ss_pred cCCCCcchhch-----hHHHHHHHH--hhhc----Ccc-------chHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 717 GQGNGLLVEDK-----NRAIRLADA--AIRA----DFE-------GKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 717 ~~~~~~~~~~~-----~~~~~~~~~--~~~~----~~~-------~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
+-.....+... .+...++.. ...+ ..+ .......-+++|+..|+..||.+|++-+|++.
T Consensus 207 DiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 207 DIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred hHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 31111110000 000011100 0000 000 01112346789999999999999999999874
No 16
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.8e-42 Score=382.85 Aligned_cols=262 Identities=26% Similarity=0.390 Sum_probs=217.0
Q ss_pred ceeccccCceEEEEEEeC------CCcEEEEEEcCCCchh-hHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEec
Q 003847 480 AYILGASGSSIMYKAVLE------DGTALAVRRIGENSVD-RFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDF 552 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 552 (791)
.+.||+|.||+||+|+.. +.+.||||.+++.... ..++|++|++++..++|||||+++|+|.+++..++|+||
T Consensus 491 ~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFEY 570 (774)
T KOG1026|consen 491 KEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFEY 570 (774)
T ss_pred hhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEEe
Confidence 457999999999999842 3578999999987555 678999999999999999999999999999999999999
Q ss_pred cCCCChhHHHHhhcCCC---------CCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcc
Q 003847 553 VPNGSLANARYRKMGSS---------PCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLE 623 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~---------~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla 623 (791)
|..|||.++|....... +.+++..+.+.||.|||.|++||-++.+|||||-..|+||+++..|||+|||++
T Consensus 571 m~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLs 650 (774)
T KOG1026|consen 571 MDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLS 650 (774)
T ss_pred cccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEecccccc
Confidence 99999999998754332 234889999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHH
Q 003847 624 RLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILL 703 (791)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ 703 (791)
+.+-..+.....+.. .=...|||||.+..+++|++||||||||+||
T Consensus 651 RdiYssDYYk~~~~t----------------------------------~lPIRWMppEsIly~kFTteSDVWs~GVvLW 696 (774)
T KOG1026|consen 651 RDIYSSDYYKVRGNT----------------------------------LLPIRWMPPESILYGKFTTESDVWSFGVVLW 696 (774)
T ss_pred hhhhhhhhhcccCCc----------------------------------eeeeecCCHHHhhcCcccchhhhhhhhhhhh
Confidence 976543322211110 0134599999999999999999999999999
Q ss_pred HHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCC
Q 003847 704 ELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPS 782 (791)
Q Consensus 704 ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 782 (791)
|+++ |+.||++-..+++ +..+.+..+ .+.++..+.++++|+..||+.+|++||+++||-..|+....
T Consensus 697 EIFsyG~QPy~glSn~EV---------Ie~i~~g~l---L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~ 764 (774)
T KOG1026|consen 697 EIFSYGKQPYYGLSNQEV---------IECIRAGQL---LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQ 764 (774)
T ss_pred hhhccccCcccccchHHH---------HHHHHcCCc---ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence 9999 7779876533222 222222222 45566688999999999999999999999999999998876
Q ss_pred CCCCC
Q 003847 783 SPSPY 787 (791)
Q Consensus 783 ~~~p~ 787 (791)
...+|
T Consensus 765 ~s~~~ 769 (774)
T KOG1026|consen 765 ASPKY 769 (774)
T ss_pred cCccc
Confidence 66555
No 17
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-41 Score=349.91 Aligned_cols=251 Identities=21% Similarity=0.316 Sum_probs=205.2
Q ss_pred hcceeccccCceEEEEEE-eCCCcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 478 ASAYILGASGSSIMYKAV-LEDGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
...++||.|..++||+|+ ...++.||||++.-+ .....+.+++|+..|+.++||||++++..|..+...|+||.||.+
T Consensus 29 eL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~ 108 (516)
T KOG0582|consen 29 ELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAG 108 (516)
T ss_pred eEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcC
Confidence 345789999999999999 567899999999754 233368899999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|++.+++......+ +++..+..|++++++||.|||.+|.||||||+.||||+.+|.|||+|||.+..+........
T Consensus 109 GS~ldIik~~~~~G---l~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~- 184 (516)
T KOG0582|consen 109 GSLLDIIKTYYPDG---LEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQV- 184 (516)
T ss_pred CcHHHHHHHHcccc---ccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccCceee-
Confidence 99999998876554 99999999999999999999999999999999999999999999999999877654321100
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC--CCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS--IKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~--~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
.+ ...+.||++|||||++.. ..|+.|+||||||++.+||.+|..||.
T Consensus 185 ------------------------------~r-f~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~ 233 (516)
T KOG0582|consen 185 ------------------------------TR-FNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFS 233 (516)
T ss_pred ------------------------------Ee-eccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcc
Confidence 00 145679999999999643 679999999999999999999999996
Q ss_pred ccccCCCCcchhchhHHHHHHHHhhhcC----------ccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 714 DELGQGNGLLVEDKNRAIRLADAAIRAD----------FEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
..... ++.-..+.+. .+........+.+++..||..||.+|||++++++-
T Consensus 234 k~pPm-------------kvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 234 KYPPM-------------KVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred cCChH-------------HHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 54221 1111111111 11222244578899999999999999999999863
No 18
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.2e-42 Score=368.91 Aligned_cols=242 Identities=26% Similarity=0.339 Sum_probs=216.3
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCC---chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGEN---SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
++-||.|+.|.|-.|+ .++|+.+|||++.+. .......+++|+-+|+-+.||||+++|++|+++.+.|+|.||+++
T Consensus 17 gkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~g 96 (786)
T KOG0588|consen 17 GKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVPG 96 (786)
T ss_pred cccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecCC
Confidence 3579999999999999 678999999999764 233346789999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|-|.+++-.++. +++.++.++++||+.|+.|+|..+|+||||||+|+|+|.++++||+|||+|....++.
T Consensus 97 GELFdylv~kG~-----l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk----- 166 (786)
T KOG0588|consen 97 GELFDYLVRKGP-----LPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK----- 166 (786)
T ss_pred chhHHHHHhhCC-----CCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCCc-----
Confidence 999999988763 9999999999999999999999999999999999999999999999999998754322
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCC-CCchhhHHHHHHHHHHHhCCcchhc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKP-NPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~-~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
.....||++.|.|||++.+.+| +.++||||.|||||.|+||+.||++
T Consensus 167 --------------------------------lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD 214 (786)
T KOG0588|consen 167 --------------------------------LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD 214 (786)
T ss_pred --------------------------------cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC
Confidence 2345689999999999999998 6799999999999999999999976
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
+ .+..+.....++.|..+...+.++++|+++|+..||++|.|++||++.
T Consensus 215 d-------------Nir~LLlKV~~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 215 D-------------NIRVLLLKVQRGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred c-------------cHHHHHHHHHcCcccCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 5 345666677778888888888999999999999999999999999985
No 19
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-41 Score=366.81 Aligned_cols=241 Identities=24% Similarity=0.331 Sum_probs=204.6
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCC----ch-hhHHHHHHHHHHHhccC-CCCccceeeEEEccCceEEEEec
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGEN----SV-DRFRDFETQVRVIAKLV-HPNLVRIRGFYWGVDEKLIIYDF 552 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv~e~ 552 (791)
...||+|+||.||.|. ..+++.||+|++.+. .. ...+.+.+|+.++++++ ||||+++++++......|+||||
T Consensus 22 ~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy 101 (370)
T KOG0583|consen 22 GRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVMEY 101 (370)
T ss_pred eeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEe
Confidence 4689999999999998 557899999987653 11 23456778999999999 99999999999999999999999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCC-CCeEEeccCcccccCCCCC
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGND-MEPKIGDFGLERLVTGDTS 631 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~-~~~kL~DFGla~~~~~~~~ 631 (791)
+.||+|.+++.... ++.+.+++.+++|++.|++|||++||+||||||+|||+|.+ +++||+|||++......
T Consensus 102 ~~gGdL~~~i~~~g-----~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~-- 174 (370)
T KOG0583|consen 102 CSGGDLFDYIVNKG-----RLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGE-- 174 (370)
T ss_pred cCCccHHHHHHHcC-----CCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccCCC--
Confidence 99999999998843 38999999999999999999999999999999999999999 99999999999876311
Q ss_pred CCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCC-CC-CchhhHHHHHHHHHHHhCC
Q 003847 632 SSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIK-PN-PKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~-~~-~~sDvwSlGvil~elltG~ 709 (791)
.......|||+.|+|||++.+.. |+ .++||||+||+||.|++|+
T Consensus 175 ----------------------------------~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~ 220 (370)
T KOG0583|consen 175 ----------------------------------DGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGR 220 (370)
T ss_pred ----------------------------------CCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCC
Confidence 11234678999999999999977 85 7899999999999999999
Q ss_pred cchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHH-HHHHHHHHhhccCCCCCCCCCHHHHH
Q 003847 710 VIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEA-LLSCFKLGYSCASPLPQKRPSMKEAL 774 (791)
Q Consensus 710 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~li~~cl~~dP~~RPs~~evl 774 (791)
.||.+.. ...+......+.+..+... ..++.+++.+|+..||.+|+++.+++
T Consensus 221 ~PF~d~~-------------~~~l~~ki~~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 221 LPFDDSN-------------VPNLYRKIRKGEFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred CCCCCcc-------------HHHHHHHHhcCCccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 9997731 2223333444555555444 78899999999999999999999999
No 20
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-42 Score=363.90 Aligned_cols=256 Identities=23% Similarity=0.327 Sum_probs=205.8
Q ss_pred hcceeccccCceEEEEEEeCCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 478 ASAYILGASGSSIMYKAVLEDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
..++.||+|.||+||+|++. -.||||++..+ ..+..+.|++|+..+++-+|.||+-+.|+|..+.. .||+.+|+|
T Consensus 395 ~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwCeG 471 (678)
T KOG0193|consen 395 LLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWCEG 471 (678)
T ss_pred hccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhccC
Confidence 34679999999999999975 36999999765 45567899999999999999999999999988777 999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
.+|+.+++.... .+...+.+.|++||++|+.|||.++|||||||..||++.+++.|||+|||++..-..-..
T Consensus 472 sSLY~hlHv~et----kfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g---- 543 (678)
T KOG0193|consen 472 SSLYTHLHVQET----KFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSG---- 543 (678)
T ss_pred chhhhhccchhh----hhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeeeecc----
Confidence 999999987664 489999999999999999999999999999999999999999999999999875432100
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC---CCCCCchhhHHHHHHHHHHHhCCcch
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS---IKPNPKWDVYSFGVILLELLTGKVIV 712 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~---~~~~~~sDvwSlGvil~elltG~~pf 712 (791)
........|+..|||||+++. .+|++.+||||||+|+|||+||..||
T Consensus 544 ------------------------------~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPy 593 (678)
T KOG0193|consen 544 ------------------------------EQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPY 593 (678)
T ss_pred ------------------------------ccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCc
Confidence 001112338889999999964 56899999999999999999999999
Q ss_pred hccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCC
Q 003847 713 VDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPS 782 (791)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 782 (791)
.....+..-.++-.+....+.. ........++.+|+..||.+++++||.+.+|+..|+++..
T Consensus 594 si~~~dqIifmVGrG~l~pd~s--------~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 594 SIQNRDQIIFMVGRGYLMPDLS--------KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred CCCChhheEEEecccccCccch--------hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 8543333322222211001100 1112245678899999999999999999999998887765
No 21
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2.4e-41 Score=356.03 Aligned_cols=292 Identities=17% Similarity=0.206 Sum_probs=213.0
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCCch---hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGENSV---DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
-.+||+|+||.||.|+ ..+|..+|+|++++... ...+.+..|-.+|...++|+||+|+-.|++.+..||||||++|
T Consensus 146 Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPG 225 (550)
T KOG0605|consen 146 LKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPG 225 (550)
T ss_pred heeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCC
Confidence 3589999999999999 55799999999988643 3345678899999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|++..+|..... |++..++.++.+++.|++-||+.|||||||||+|+|||..|++||+|||++.-+.........
T Consensus 226 GD~mTLL~~~~~-----L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~ 300 (550)
T KOG0605|consen 226 GDMMTLLMRKDT-----LTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESY 300 (550)
T ss_pred ccHHHHHHhcCc-----CchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhh
Confidence 999999987753 999999999999999999999999999999999999999999999999999755432211100
Q ss_pred CCCccccCCcccccccccccC---C---------CCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHH
Q 003847 636 GGSARNFGSKRSTASRDSFQD---L---------GPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILL 703 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~---~---------~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ 703 (791)
...... ...........+.. . .............+.+|||.|||||++.+..|+..+|.||||||+|
T Consensus 301 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~Imy 379 (550)
T KOG0605|consen 301 RLDEQM-QINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMY 379 (550)
T ss_pred cchhhh-hhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHH
Confidence 000000 00000000000000 0 0000001112233568999999999999999999999999999999
Q ss_pred HHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCC---HHHHHHH----
Q 003847 704 ELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPS---MKEALQA---- 776 (791)
Q Consensus 704 elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~~---- 776 (791)
||+.|.+||..+...... ..+..-...-.++.......+..|||.+|+. ||++|.- ++||.+.
T Consensus 380 EmLvGyPPF~s~tp~~T~---------rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~ 449 (550)
T KOG0605|consen 380 EMLVGYPPFCSETPQETY---------RKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFK 449 (550)
T ss_pred HHHhCCCCCCCCCHHHHH---------HHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccc
Confidence 999999999876443221 1222222122233333456788999999999 9999974 6666553
Q ss_pred ---hccCCCCCCCC
Q 003847 777 ---LEKIPSSPSPY 787 (791)
Q Consensus 777 ---L~~i~~~~~p~ 787 (791)
.+.|...+.||
T Consensus 450 ~v~W~~l~~~~apf 463 (550)
T KOG0605|consen 450 GVDWDHLREMPAPF 463 (550)
T ss_pred cCCcchhhcCCCCC
Confidence 34455555555
No 22
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-41 Score=332.43 Aligned_cols=231 Identities=23% Similarity=0.299 Sum_probs=205.2
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCCchhh---HHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGENSVDR---FRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
-..||.|+||.|..++ ..+|..+|+|++.+...-+ .+...+|.++|+.+.||.++++++.|.+.+..|+||||++|
T Consensus 49 ~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmeyv~G 128 (355)
T KOG0616|consen 49 LKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEYVPG 128 (355)
T ss_pred eeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEeccCC
Confidence 4689999999999999 5579999999998764443 34567899999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|.|..++++.+. +++..++-++.||+.||+|||+.+|++|||||+|||+|.+|.+||+|||+|+.+...
T Consensus 129 GElFS~Lrk~~r-----F~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r------ 197 (355)
T KOG0616|consen 129 GELFSYLRKSGR-----FSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR------ 197 (355)
T ss_pred ccHHHHHHhcCC-----CCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCc------
Confidence 999999987653 999999999999999999999999999999999999999999999999999987532
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
....||||.|+|||++....|+.++|.|||||++|||+.|.+||.+.
T Consensus 198 ---------------------------------T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~ 244 (355)
T KOG0616|consen 198 ---------------------------------TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDD 244 (355)
T ss_pred ---------------------------------EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCC
Confidence 23578999999999999999999999999999999999999999765
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCC
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKR 767 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 767 (791)
. ...+.+..+.+....+.-...++.+|+.++++.|-.+|
T Consensus 245 ~-------------~~~iY~KI~~~~v~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 245 N-------------PIQIYEKILEGKVKFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred C-------------hHHHHHHHHhCcccCCcccCHHHHHHHHHHHhhhhHhh
Confidence 2 24556666667666666677889999999999999999
No 23
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9e-42 Score=355.78 Aligned_cols=254 Identities=22% Similarity=0.269 Sum_probs=197.1
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCCc--hhhHHHHHHHHHHHhccCCCCccceeeEEEcc--CceEEEEeccC
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGV--DEKLIIYDFVP 554 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv~e~~~ 554 (791)
-+.||+|.||.||+|+ ..+|+.||+|++..+. ........+||.||++|+||||++|.+...+. +.+|+|+|||+
T Consensus 122 i~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMd 201 (560)
T KOG0600|consen 122 IEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMD 201 (560)
T ss_pred HHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEeccc
Confidence 4689999999999999 6789999999997654 33345678999999999999999999998877 68999999996
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
. +|.-++..... .+++.+++.+++|++.||+|||++||+|||||.+|||||.+|.+||+|||+|+.+......
T Consensus 202 h-DL~GLl~~p~v----kft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~-- 274 (560)
T KOG0600|consen 202 H-DLSGLLSSPGV----KFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSA-- 274 (560)
T ss_pred c-hhhhhhcCCCc----ccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCc--
Confidence 5 88777765432 4999999999999999999999999999999999999999999999999999987643321
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
..+..+-|.=|+|||.+.+ ..|+.++|+||.||||.||++|+++|.
T Consensus 275 ---------------------------------~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~ 321 (560)
T KOG0600|consen 275 ---------------------------------PYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQ 321 (560)
T ss_pred ---------------------------------ccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcC
Confidence 2345557888999999986 579999999999999999999999886
Q ss_pred cccc-----------------CCCCcchhchh--HHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 003847 714 DELG-----------------QGNGLLVEDKN--RAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEAL 774 (791)
Q Consensus 714 ~~~~-----------------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 774 (791)
+..+ .|....+.... ....-....+... ....+...++|+..+|..||.+|.||.+++
T Consensus 322 G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~---~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL 398 (560)
T KOG0600|consen 322 GRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRET---FKDFPASALDLLEKLLSLDPDKRGTASSAL 398 (560)
T ss_pred CccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHH---hccCCHHHHHHHHHHhccCccccccHHHHh
Confidence 5432 11100000000 0000000011110 111234668899999999999999999998
Q ss_pred HH
Q 003847 775 QA 776 (791)
Q Consensus 775 ~~ 776 (791)
+.
T Consensus 399 ~s 400 (560)
T KOG0600|consen 399 QS 400 (560)
T ss_pred cC
Confidence 64
No 24
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-41 Score=351.34 Aligned_cols=255 Identities=22% Similarity=0.228 Sum_probs=198.9
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCCchhhH-HHHHHHHHHHhccC-CCCccceeeEEEccC-ceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGENSVDRF-RDFETQVRVIAKLV-HPNLVRIRGFYWGVD-EKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~-~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~-~~~lv~e~~~~ 555 (791)
-+.||.|.||.||+|+ .++|..||||++++.-.... -.-.+|++.|++|+ |||||++.+++.+.+ ..|+|||||+
T Consensus 15 i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md- 93 (538)
T KOG0661|consen 15 IRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMD- 93 (538)
T ss_pred HHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhh-
Confidence 3579999999999999 67899999999987533221 23468999999998 999999999999988 8999999995
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
.+|+++++.+.. .+++.+++.|+.||++||+|+|++|+.|||+||+|||+.....+||+|||+|+.+....
T Consensus 94 ~NLYqLmK~R~r----~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Skp----- 164 (538)
T KOG0661|consen 94 CNLYQLMKDRNR----LFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKP----- 164 (538)
T ss_pred hhHHHHHhhcCC----cCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccCC-----
Confidence 599999887732 59999999999999999999999999999999999999988899999999999875332
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc-CCCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR-SIKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~-~~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
+.+.++.|.=|+|||++. ...|+.+.||||+|||++|+.+-++.|.+
T Consensus 165 --------------------------------PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG 212 (538)
T KOG0661|consen 165 --------------------------------PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPG 212 (538)
T ss_pred --------------------------------CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCC
Confidence 344566788899999985 56789999999999999999999998865
Q ss_pred cccC------------CCCcchhchhHHHHHHHHhhhcCcc-----chHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 715 ELGQ------------GNGLLVEDKNRAIRLADAAIRADFE-----GKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 715 ~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
..+- .....+.+...+.....-.+..... .......++.+++.+|++.||++||||.|+++.
T Consensus 213 ~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 213 ASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred CcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 4321 0111111111111111111110000 011144678899999999999999999999985
No 25
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.6e-40 Score=351.61 Aligned_cols=258 Identities=20% Similarity=0.281 Sum_probs=207.7
Q ss_pred cccchHHHhhhcceeccccCceEEEEEEeCCCcEEEEEEcCCCchhh---HHHHHHHHHHHhccCCCCccceeeEEEc--
Q 003847 468 KELELETLLKASAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDR---FRDFETQVRVIAKLVHPNLVRIRGFYWG-- 542 (791)
Q Consensus 468 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~H~nIv~l~~~~~~-- 542 (791)
+.++.+++.......||+|+++.||+|.. +|+.||||+++...... .+.+.+|+++|++++||||+++++++.+
T Consensus 13 ~~i~~~~i~~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~ 91 (283)
T PHA02988 13 KCIESDDIDKYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIV 91 (283)
T ss_pred eecCHHHcCCCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecc
Confidence 45666777666678999999999999998 68999999997643322 4678899999999999999999999877
Q ss_pred --cCceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCeecCCCCCCeEecCCCCeEEec
Q 003847 543 --VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE-KKHVHGNLKPRNVLLGNDMEPKIGD 619 (791)
Q Consensus 543 --~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~ivHrDlkp~NILl~~~~~~kL~D 619 (791)
....++||||+++|+|.+++.... .+++.....++.|++.||+|||+ .+++||||||+||++++++.+||+|
T Consensus 92 ~~~~~~~lv~Ey~~~g~L~~~l~~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~d 166 (283)
T PHA02988 92 DDLPRLSLILEYCTRGYLREVLDKEK-----DLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIIC 166 (283)
T ss_pred cCCCceEEEEEeCCCCcHHHHHhhCC-----CCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcc
Confidence 346789999999999999987643 38899999999999999999998 5999999999999999999999999
Q ss_pred cCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC--CCCCCchhhHH
Q 003847 620 FGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS--IKPNPKWDVYS 697 (791)
Q Consensus 620 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~--~~~~~~sDvwS 697 (791)
||+++...... ....||..|+|||++.+ ..++.++||||
T Consensus 167 fg~~~~~~~~~---------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~S 207 (283)
T PHA02988 167 HGLEKILSSPP---------------------------------------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYS 207 (283)
T ss_pred cchHhhhcccc---------------------------------------ccccCcccccCHHHhhhccccccchhhhhH
Confidence 99988653211 01237888999999976 67899999999
Q ss_pred HHHHHHHHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHh
Q 003847 698 FGVILLELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQAL 777 (791)
Q Consensus 698 lGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 777 (791)
|||++|||++|+.||.+.... .....+....... ..+...+..+.+++.+||+.||++|||++|+++.|
T Consensus 208 lGvil~el~~g~~Pf~~~~~~---------~~~~~i~~~~~~~--~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l 276 (283)
T PHA02988 208 LGVVLWEIFTGKIPFENLTTK---------EIYDLIINKNNSL--KLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNL 276 (283)
T ss_pred HHHHHHHHHHCCCCCCCCCHH---------HHHHHHHhcCCCC--CCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHH
Confidence 999999999999999653110 0011111111111 11112566789999999999999999999999999
Q ss_pred ccCC
Q 003847 778 EKIP 781 (791)
Q Consensus 778 ~~i~ 781 (791)
+.+.
T Consensus 277 ~~~~ 280 (283)
T PHA02988 277 SLYK 280 (283)
T ss_pred HHHH
Confidence 8764
No 26
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.6e-40 Score=320.12 Aligned_cols=257 Identities=22% Similarity=0.245 Sum_probs=198.3
Q ss_pred cceeccccCceEEEEEE-eCCCcEEEEEEcCCCchh--hHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 479 SAYILGASGSSIMYKAV-LEDGTALAVRRIGENSVD--RFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
..+.+|+|.||.||+|+ .++|+.||||+++..... ......+|++.|+.++|+||+.++++|-..+..-+|+|||+
T Consensus 6 ~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~- 84 (318)
T KOG0659|consen 6 KLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMP- 84 (318)
T ss_pred hhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEecc-
Confidence 34689999999999999 678999999999764222 12457899999999999999999999999999999999995
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
.+|+..++.... .++..+++.++.++++||+|||++.|+||||||.|+|++.+|.+||+|||+|+.+......
T Consensus 85 tdLe~vIkd~~i----~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~--- 157 (318)
T KOG0659|consen 85 TDLEVVIKDKNI----ILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI--- 157 (318)
T ss_pred ccHHHHhccccc----ccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcc---
Confidence 589988876543 4899999999999999999999999999999999999999999999999999987643221
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
.+..+-|.-|+|||.+.| ..|+..+||||.|||+.||+-|.+.|.+
T Consensus 158 ---------------------------------~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG 204 (318)
T KOG0659|consen 158 ---------------------------------QTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPG 204 (318)
T ss_pred ---------------------------------cccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCC
Confidence 111245677999999876 6799999999999999999999987765
Q ss_pred ccc------------CCCCcchhchhHHHHHHHHhhhcCcc---chHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 715 ELG------------QGNGLLVEDKNRAIRLADAAIRADFE---GKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 715 ~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
+.+ ......+.+...+.+..+-...+..+ .......+.++|+.+|+..||.+|+++.|++++
T Consensus 205 ~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 205 DSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred CchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 432 00111111111111111111000000 111234567999999999999999999999876
No 27
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=3.2e-40 Score=359.00 Aligned_cols=259 Identities=24% Similarity=0.343 Sum_probs=200.0
Q ss_pred cceeccccCceEEEEEEe------CCCcEEEEEEcCCCc-hhhHHHHHHHHHHHhcc-CCCCccceeeEEEccC-ceEEE
Q 003847 479 SAYILGASGSSIMYKAVL------EDGTALAVRRIGENS-VDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVD-EKLII 549 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~-~~~lv 549 (791)
..+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+++++++ +||||+++++++...+ ..++|
T Consensus 11 ~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv 90 (338)
T cd05102 11 LGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVI 90 (338)
T ss_pred eeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEE
Confidence 356899999999999973 235789999997543 33446789999999999 8999999999887654 57899
Q ss_pred EeccCCCChhHHHHhhcCC---------------------------------------------------------CCCC
Q 003847 550 YDFVPNGSLANARYRKMGS---------------------------------------------------------SPCH 572 (791)
Q Consensus 550 ~e~~~~gsL~~~l~~~~~~---------------------------------------------------------~~~~ 572 (791)
|||+++|+|.+++...... ...+
T Consensus 91 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (338)
T cd05102 91 VEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSP 170 (338)
T ss_pred EecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccCC
Confidence 9999999999998753210 0124
Q ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCCccccCCcccccccc
Q 003847 573 LPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRD 652 (791)
Q Consensus 573 l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (791)
+++.++..++.||++||+|||+.||+||||||+|||++.++.+||+|||+++.+.......
T Consensus 171 l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~------------------- 231 (338)
T cd05102 171 LTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV------------------- 231 (338)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchh-------------------
Confidence 8888999999999999999999999999999999999999999999999998653221100
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhccccCCCCcchhchhHHH
Q 003847 653 SFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDELGQGNGLLVEDKNRAI 731 (791)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~ 731 (791)
......++..|+|||++.+..++.++|||||||++|||++ |..||.+.... .....
T Consensus 232 ---------------~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~--------~~~~~ 288 (338)
T cd05102 232 ---------------RKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN--------EEFCQ 288 (338)
T ss_pred ---------------cccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc--------HHHHH
Confidence 0111236678999999999899999999999999999997 99998653211 00001
Q ss_pred HHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCC
Q 003847 732 RLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPS 782 (791)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 782 (791)
.+.+.. ....+...+..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 289 ~~~~~~---~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 289 RLKDGT---RMRAPENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHhcCC---CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 111110 011122245678899999999999999999999999998754
No 28
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-42 Score=351.09 Aligned_cols=245 Identities=23% Similarity=0.350 Sum_probs=207.9
Q ss_pred cceeccccCceEEEEEE-eCCCcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 479 SAYILGASGSSIMYKAV-LEDGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
..+.||+|.||.||+|. .++++.||+|++.-+ ..+..+++++|+.+|.+++++||.++|+.|..+...+++||||.||
T Consensus 17 ~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gG 96 (467)
T KOG0201|consen 17 KLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGG 96 (467)
T ss_pred cchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCc
Confidence 34789999999999999 567999999999765 4555788999999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
++.+.+.... .+.+..+.-|+++++.||.|||..+.+|||||+.|||+..+|.+||+|||.+..+.....
T Consensus 97 sv~~lL~~~~-----~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~----- 166 (467)
T KOG0201|consen 97 SVLDLLKSGN-----ILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVK----- 166 (467)
T ss_pred chhhhhccCC-----CCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhh-----
Confidence 9999887654 257888888999999999999999999999999999999999999999999987754322
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
....++||+.|||||++.+..|+.|+||||||++.+||++|.+|+.+..
T Consensus 167 -------------------------------rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~h 215 (467)
T KOG0201|consen 167 -------------------------------RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLH 215 (467)
T ss_pred -------------------------------ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccC
Confidence 1235679999999999999999999999999999999999999998765
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
...+...+.... .+.++. .....+.+|+..||++||+.||+|.++++.
T Consensus 216 PmrvlflIpk~~----------PP~L~~--~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 216 PMRVLFLIPKSA----------PPRLDG--DFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred cceEEEeccCCC----------CCcccc--ccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 533333332211 122222 256678999999999999999999999874
No 29
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=2.8e-40 Score=356.88 Aligned_cols=240 Identities=20% Similarity=0.246 Sum_probs=197.0
Q ss_pred eccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 482 ILGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
+||+|+||.||+++. .+|+.||||+++... ......+.+|++++++++||||+++++++...+..|+||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~ 81 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCc
Confidence 699999999999985 578999999997542 2334567889999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++.... .+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++......
T Consensus 82 L~~~l~~~~-----~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~------- 149 (323)
T cd05571 82 LFFHLSRER-----VFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG------- 149 (323)
T ss_pred HHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC-------
Confidence 999887643 38999999999999999999999999999999999999999999999999987532110
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELG 717 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~ 717 (791)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 150 -----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~ 200 (323)
T cd05571 150 -----------------------------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 200 (323)
T ss_pred -----------------------------CcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH
Confidence 011234599999999999999999999999999999999999999964311
Q ss_pred CCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 003847 718 QGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRP-----SMKEALQ 775 (791)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 775 (791)
..............+......+.+++.+||+.||++|| ++.++++
T Consensus 201 -------------~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 201 -------------EKLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred -------------HHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 11111122222222233566788999999999999999 7998875
No 30
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.5e-40 Score=335.72 Aligned_cols=241 Identities=20% Similarity=0.331 Sum_probs=207.2
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
.+.||+|.||.|-+|. ...|+.||||.++++. .+..-.+.+|++||..|+||||+.+|++|++.+.+.|||||..+
T Consensus 58 ~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~ 137 (668)
T KOG0611|consen 58 TETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASG 137 (668)
T ss_pred HHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCC
Confidence 4579999999999998 5789999999998753 33445688999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|.|++|+.+.+. +++.+++.+++||+.|+.|+|.++++|||||.+|||+|.++++||+|||++.++....
T Consensus 138 GeLYDYiSer~~-----LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~k----- 207 (668)
T KOG0611|consen 138 GELYDYISERGS-----LSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKK----- 207 (668)
T ss_pred ccHHHHHHHhcc-----ccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhcccc-----
Confidence 999999998764 9999999999999999999999999999999999999999999999999998765322
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCC-CCchhhHHHHHHHHHHHhCCcchhc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKP-NPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~-~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
..+.+||++-|.+||++.+.+| ++.+|-|||||+||.|+.|..||++
T Consensus 208 --------------------------------fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG 255 (668)
T KOG0611|consen 208 --------------------------------FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDG 255 (668)
T ss_pred --------------------------------HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCC
Confidence 2346789999999999999888 6899999999999999999999976
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
.. -..++...-.+.+..+. .+....-||+.||..+|++|.|+.||...
T Consensus 256 ~D-------------hk~lvrQIs~GaYrEP~-~PSdA~gLIRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 256 RD-------------HKRLVRQISRGAYREPE-TPSDASGLIRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred ch-------------HHHHHHHhhcccccCCC-CCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence 41 22334444444443332 44566779999999999999999999765
No 31
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=6.4e-40 Score=352.29 Aligned_cols=239 Identities=20% Similarity=0.230 Sum_probs=195.0
Q ss_pred ccccCceEEEEEEe-CCCcEEEEEEcCCC---chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 483 LGASGSSIMYKAVL-EDGTALAVRRIGEN---SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 483 lG~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
||+|+||.||+|+. .+++.||+|++... .......+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 69999999999995 46889999998653 233446778899999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++.... .+++..+..++.|++.||+|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 81 ~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~------- 148 (312)
T cd05585 81 FHHLQREG-----RFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDD------- 148 (312)
T ss_pred HHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCC-------
Confidence 99887643 389999999999999999999999999999999999999999999999999875321110
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccccC
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQ 718 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~ 718 (791)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+...
T Consensus 149 -----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~- 198 (312)
T cd05585 149 -----------------------------KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV- 198 (312)
T ss_pred -----------------------------ccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH-
Confidence 11234589999999999999999999999999999999999999965311
Q ss_pred CCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCC---HHHHHH
Q 003847 719 GNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPS---MKEALQ 775 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~ 775 (791)
.+............+......+.+++.+||+.||++||+ +.|+++
T Consensus 199 ------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 199 ------------NEMYRKILQEPLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred ------------HHHHHHHHcCCCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence 122222222222223335567889999999999999985 556554
No 32
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-40 Score=355.53 Aligned_cols=236 Identities=22% Similarity=0.275 Sum_probs=204.0
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC---chhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEeccC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN---SVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
-.+||+|.||+|+++.. .+++.+|||+++++ ..+..+....|.+|+... +||.++.++..|+.+++.|+||||+.
T Consensus 373 l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey~~ 452 (694)
T KOG0694|consen 373 LAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEYVA 452 (694)
T ss_pred EEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEecC
Confidence 46999999999999994 56899999999886 344556778888888777 59999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
||++..+.+.. .+++..++-++..|+.||+|||++|||+||||.+|||+|.+|.+||+|||+++.-...
T Consensus 453 Ggdm~~~~~~~------~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~----- 521 (694)
T KOG0694|consen 453 GGDLMHHIHTD------VFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ----- 521 (694)
T ss_pred CCcEEEEEecc------cccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCC-----
Confidence 99965544332 3999999999999999999999999999999999999999999999999999864311
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
...++.+|||+.|||||++.+..|+.++|.|||||+||||+.|+.||.+
T Consensus 522 -------------------------------g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~g 570 (694)
T KOG0694|consen 522 -------------------------------GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPG 570 (694)
T ss_pred -------------------------------CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCC
Confidence 1134578999999999999999999999999999999999999999976
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSM 770 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 770 (791)
+. -.+++|..+..+...+...+.+..+++.++|..+|++|.-+
T Consensus 571 dd-------------Eee~FdsI~~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 571 DD-------------EEEVFDSIVNDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred CC-------------HHHHHHHHhcCCCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 52 25677777776666666678889999999999999999855
No 33
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-41 Score=321.28 Aligned_cols=241 Identities=26% Similarity=0.355 Sum_probs=203.2
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
.++||+|.|+.||++. ..+|+.+|+|++... +....+++++|++|-+.|+|||||++.+.+.+.+..|+|+|+|+|+
T Consensus 16 ~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~ 95 (355)
T KOG0033|consen 16 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 95 (355)
T ss_pred HHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecccch
Confidence 4689999999999998 567999999998543 3446788999999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecC---CCCeEEeccCcccccCCCCCCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN---DMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~---~~~~kL~DFGla~~~~~~~~~~ 633 (791)
+|..-+-.+. .+++..+-.+++||++||.|+|.++|||||+||+|+++-. .--+||+|||+|..+.....
T Consensus 96 dl~~eIV~R~-----~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~-- 168 (355)
T KOG0033|consen 96 ELFEDIVARE-----FYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEA-- 168 (355)
T ss_pred HHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCccc--
Confidence 9987665543 3888999999999999999999999999999999999953 33489999999998762211
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
.-...|||+|||||+++..+|+..+|||+.|||||-|+.|.+||.
T Consensus 169 -----------------------------------~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~ 213 (355)
T KOG0033|consen 169 -----------------------------------WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFW 213 (355)
T ss_pred -----------------------------------cccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCC
Confidence 123569999999999999999999999999999999999999997
Q ss_pred ccccCCCCcchhchhHHHHHHHHhhhcCccch----HHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 714 DELGQGNGLLVEDKNRAIRLADAAIRADFEGK----EEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
++. ..+++.....+.++.+ ....++..+|+++||..||.+|.|+.|.++
T Consensus 214 ~~~-------------~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 214 DED-------------QHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred Ccc-------------HHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 742 2445555555544332 335577899999999999999999999875
No 34
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2e-39 Score=343.92 Aligned_cols=248 Identities=17% Similarity=0.186 Sum_probs=197.6
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
.+.||+|+||.||++.. .+|+.||||.+.... ......+.+|++++++++|+||+++++++.+.+..++||||+++
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~ 84 (285)
T cd05631 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNG 84 (285)
T ss_pred EEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCC
Confidence 46899999999999994 679999999986542 22234678899999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|+|.+++...... .+++..+..++.|++.||+|||+.+|+||||||+|||++.++.+||+|||++........
T Consensus 85 g~L~~~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~---- 157 (285)
T cd05631 85 GDLKFHIYNMGNP---GFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGET---- 157 (285)
T ss_pred CcHHHHHHhhCCC---CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCe----
Confidence 9999887654322 389999999999999999999999999999999999999999999999999876532110
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
.....||..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 158 ---------------------------------~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~ 204 (285)
T cd05631 158 ---------------------------------VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKR 204 (285)
T ss_pred ---------------------------------ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCC
Confidence 11235899999999999999999999999999999999999999754
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHHH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPS-----MKEALQA 776 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 776 (791)
..... ...+..................+.+|+.+||+.||++||+ ++++++.
T Consensus 205 ~~~~~---------~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 205 KERVK---------REEVDRRVKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred Ccchh---------HHHHHHHhhcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 22110 0111111111111122224567889999999999999997 7888763
No 35
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-40 Score=338.95 Aligned_cols=248 Identities=21% Similarity=0.299 Sum_probs=196.1
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCCch--------------hhHHHHHHHHHHHhccCCCCccceeeEEEcc-
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGENSV--------------DRFRDFETQVRVIAKLVHPNLVRIRGFYWGV- 543 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~- 543 (791)
..-||+|.||.|-+|+ ..+++.||||++.+... ...+...+||.+|++++|||||+|+++..+.
T Consensus 102 ~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLDDP~ 181 (576)
T KOG0585|consen 102 IKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLDDPE 181 (576)
T ss_pred hhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeecCcc
Confidence 4579999999999999 45799999999965311 1135789999999999999999999998775
Q ss_pred -CceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCc
Q 003847 544 -DEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGL 622 (791)
Q Consensus 544 -~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGl 622 (791)
+..|||+|||..|.+...-. .. ..+++.++++|+++++.||+|||.+|||||||||+|+|++++|++||+|||.
T Consensus 182 s~~~YlVley~s~G~v~w~p~----d~-~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFGV 256 (576)
T KOG0585|consen 182 SDKLYLVLEYCSKGEVKWCPP----DK-PELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFGV 256 (576)
T ss_pred cCceEEEEEeccCCccccCCC----Cc-ccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeeccce
Confidence 57899999999988754211 11 1289999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCC----CCCchhhHHH
Q 003847 623 ERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIK----PNPKWDVYSF 698 (791)
Q Consensus 623 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~----~~~~sDvwSl 698 (791)
+........... -.......|||.|+|||...++. .+.+.||||+
T Consensus 257 s~~~~~~~~~~~-------------------------------d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWal 305 (576)
T KOG0585|consen 257 SNEFPQGSDEGS-------------------------------DDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWAL 305 (576)
T ss_pred eeecccCCcccc-------------------------------HHHHhhcCCCccccchHhhcCCCCccccchhhhhhhh
Confidence 987643311100 00122346999999999987622 3678999999
Q ss_pred HHHHHHHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCc--cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 699 GVILLELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADF--EGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 699 Gvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
||+||.|+.|+.||.++. ..++++.+..... +...++...+.+||.+||.+||++|.+..+|...
T Consensus 306 GVTLYCllfG~~PF~~~~-------------~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~H 372 (576)
T KOG0585|consen 306 GVTLYCLLFGQLPFFDDF-------------ELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLH 372 (576)
T ss_pred hhhHHHhhhccCCcccch-------------HHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheec
Confidence 999999999999997652 3444555444333 2233467789999999999999999999998654
No 36
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1e-39 Score=347.16 Aligned_cols=240 Identities=20% Similarity=0.250 Sum_probs=197.4
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 85 (291)
T cd05612 6 IKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPG 85 (291)
T ss_pred eeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCC
Confidence 468999999999999954 68999999986532 22345688999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|+|.+++.... .+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 86 ~~L~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~----- 155 (291)
T cd05612 86 GELFSYLRNSG-----RFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRT----- 155 (291)
T ss_pred CCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCc-----
Confidence 99999987653 38999999999999999999999999999999999999999999999999987653210
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
...+||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 156 ----------------------------------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~ 201 (291)
T cd05612 156 ----------------------------------WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDD 201 (291)
T ss_pred ----------------------------------ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 1234899999999999988999999999999999999999999653
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHHH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPS-----MKEALQA 776 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 776 (791)
.. ..............+......+.+++.+||+.||.+||+ ++|+++.
T Consensus 202 ~~-------------~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 202 NP-------------FGIYEKILAGKLEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred CH-------------HHHHHHHHhCCcCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 21 111222222222222224567889999999999999995 8887754
No 37
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.5e-39 Score=351.13 Aligned_cols=241 Identities=20% Similarity=0.258 Sum_probs=195.9
Q ss_pred eeccccCceEEEEEEe-CCCcEEEEEEcCCC---chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 481 YILGASGSSIMYKAVL-EDGTALAVRRIGEN---SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
++||+|+||.||+++. .+|+.||+|++... .......+.+|++++++++||||+++++++...+..|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 3699999999999994 57899999999754 2233456778999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++.... .+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 81 ~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~----- 150 (323)
T cd05595 81 ELFFHLSRER-----VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA----- 150 (323)
T ss_pred cHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCC-----
Confidence 9998876543 389999999999999999999999999999999999999999999999999875321110
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 151 -------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~ 199 (323)
T cd05595 151 -------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 199 (323)
T ss_pred -------------------------------ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCC
Confidence 1123458999999999999899999999999999999999999986431
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRP-----SMKEALQ 775 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 775 (791)
. ..............+......+.+++.+||+.||++|| ++.++++
T Consensus 200 ~-------------~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 200 H-------------ERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred H-------------HHHHHHHhcCCCCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 1 11111111122222223456788999999999999998 8888875
No 38
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.6e-39 Score=351.47 Aligned_cols=241 Identities=22% Similarity=0.264 Sum_probs=196.8
Q ss_pred eccccCceEEEEEEe-CCCcEEEEEEcCCC---chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 482 ILGASGSSIMYKAVL-EDGTALAVRRIGEN---SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
+||+|+||.||+++. .+|+.||||++... .......+.+|+++++.++||||+++++++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~ 81 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGE 81 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCC
Confidence 689999999999994 56899999999754 23345678889999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++.... .+++.++..++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 82 L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~------ 150 (328)
T cd05593 82 LFFHLSRER-----VFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAA------ 150 (328)
T ss_pred HHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCccc------
Confidence 998876543 389999999999999999999999999999999999999999999999999875321110
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELG 717 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~ 717 (791)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 151 ------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~ 200 (328)
T cd05593 151 ------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 200 (328)
T ss_pred ------------------------------ccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH
Confidence 11234589999999999998999999999999999999999999964311
Q ss_pred CCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 003847 718 QGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRP-----SMKEALQA 776 (791)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 776 (791)
.+............+......+.+++.+||+.||++|| ++.|+++.
T Consensus 201 -------------~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 201 -------------EKLFELILMEDIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred -------------HHHHHHhccCCccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 11111111122222223456788999999999999997 89998864
No 39
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.8e-40 Score=317.48 Aligned_cols=243 Identities=24% Similarity=0.383 Sum_probs=202.1
Q ss_pred cceeccccCceEEEEEE-eCCCcEEEEEEcCCC--------chhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEE
Q 003847 479 SAYILGASGSSIMYKAV-LEDGTALAVRRIGEN--------SVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLI 548 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~--------~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 548 (791)
..++||.|..++|-++. .++|..+|+|++... .....++-.+|+.||+++ .||+|+++.++|+.+...++
T Consensus 21 pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~Fl 100 (411)
T KOG0599|consen 21 PKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFVFL 100 (411)
T ss_pred hHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhh
Confidence 45789999999999888 567899999998432 111234567899999998 69999999999999999999
Q ss_pred EEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCC
Q 003847 549 IYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTG 628 (791)
Q Consensus 549 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 628 (791)
|+|.|+.|.|.|++...-. +++...++|++|+.+|++|||.++||||||||+|||+|++.++||+|||+++.+.+
T Consensus 101 VFdl~prGELFDyLts~Vt-----lSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~ 175 (411)
T KOG0599|consen 101 VFDLMPRGELFDYLTSKVT-----LSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEP 175 (411)
T ss_pred hhhhcccchHHHHhhhhee-----ecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCC
Confidence 9999999999999988753 99999999999999999999999999999999999999999999999999998764
Q ss_pred CCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc------CCCCCCchhhHHHHHHH
Q 003847 629 DTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR------SIKPNPKWDVYSFGVIL 702 (791)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~------~~~~~~~sDvwSlGvil 702 (791)
.. .....||||+|.|||.++ ...|+..+|+||+|||+
T Consensus 176 Ge-------------------------------------kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVIm 218 (411)
T KOG0599|consen 176 GE-------------------------------------KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIM 218 (411)
T ss_pred ch-------------------------------------hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHH
Confidence 32 234678999999999985 35688899999999999
Q ss_pred HHHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCcc----chHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 703 LELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFE----GKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 703 ~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
|.|+.|.+||... ...-+..-.+.+.+. ...+.+....+||.+||+.||.+|.|++|+++.
T Consensus 219 yTLLaGcpPFwHR-------------kQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 219 YTLLAGCPPFWHR-------------KQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred HHHHcCCCchhHH-------------HHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 9999999999542 111222233334332 334466778999999999999999999999863
No 40
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.5e-39 Score=351.96 Aligned_cols=240 Identities=20% Similarity=0.280 Sum_probs=196.4
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++.+++..|+||||+++
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 102 (329)
T PTZ00263 23 GETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVG 102 (329)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCC
Confidence 468999999999999954 68999999986532 23346788999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|+|.+++.... .+++..+..++.|++.||+|||+.||+||||||+|||++.++.+||+|||+++......
T Consensus 103 ~~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~----- 172 (329)
T PTZ00263 103 GELFTHLRKAG-----RFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT----- 172 (329)
T ss_pred ChHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCc-----
Confidence 99999887653 38899999999999999999999999999999999999999999999999987653211
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
...+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.
T Consensus 173 ----------------------------------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 218 (329)
T PTZ00263 173 ----------------------------------FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDD 218 (329)
T ss_pred ----------------------------------ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCC
Confidence 1235899999999999989999999999999999999999999653
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHHH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPS-----MKEALQA 776 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 776 (791)
.. .+.......+....+......+.+++.+||+.||.+||+ ++|+++.
T Consensus 219 ~~-------------~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 219 TP-------------FRIYEKILAGRLKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred CH-------------HHHHHHHhcCCcCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 21 111111111222222224456789999999999999997 6777643
No 41
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-40 Score=346.28 Aligned_cols=239 Identities=26% Similarity=0.398 Sum_probs=200.4
Q ss_pred eeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCChhH
Q 003847 481 YILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN 560 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~ 560 (791)
+-||.|+.|.||.|+++ ++.||||+++.- -+.+|+-|++|+|+||+.+.|+|.....+|||||||..|-|.+
T Consensus 130 eWlGSGaQGAVF~Grl~-netVAVKKV~el-------kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~ 201 (904)
T KOG4721|consen 130 EWLGSGAQGAVFLGRLH-NETVAVKKVREL-------KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYE 201 (904)
T ss_pred hhhccCcccceeeeecc-CceehhHHHhhh-------hhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHH
Confidence 57999999999999986 689999987542 2457888999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCCcc
Q 003847 561 ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSAR 640 (791)
Q Consensus 561 ~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~ 640 (791)
.++... .+.......|..+||.|++|||.+.|||||||.-||||..+..+||+|||-++.....
T Consensus 202 VLka~~-----~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~----------- 265 (904)
T KOG4721|consen 202 VLKAGR-----PITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK----------- 265 (904)
T ss_pred HHhccC-----ccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhh-----------
Confidence 998765 3788889999999999999999999999999999999999999999999999876532
Q ss_pred ccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccccCCC
Q 003847 641 NFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQGN 720 (791)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~ 720 (791)
.+...++||..|||||+++..++++|+||||||||||||+||..||.+-...-.
T Consensus 266 --------------------------STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI 319 (904)
T KOG4721|consen 266 --------------------------STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI 319 (904)
T ss_pred --------------------------hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee
Confidence 123467899999999999999999999999999999999999999976422111
Q ss_pred CcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 721 GLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
-. .+-...+ ..+.+...+..+.-|+++||+..|..||++.+++..|+-.
T Consensus 320 Iw---------GVGsNsL--~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 320 IW---------GVGSNSL--HLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred EE---------eccCCcc--cccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 00 0000111 1233444677788899999999999999999999998643
No 42
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.8e-40 Score=310.74 Aligned_cols=244 Identities=20% Similarity=0.287 Sum_probs=206.8
Q ss_pred cceeccccCceEEEEEE-eCCCcEEEEEEcCCCch---hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccC
Q 003847 479 SAYILGASGSSIMYKAV-LEDGTALAVRRIGENSV---DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
.+..||+|-||.||.|+ .+++-.||+|++.+... ....++.+|++|-..|+||||+++|++|.+....|+++||.+
T Consensus 26 igr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEya~ 105 (281)
T KOG0580|consen 26 IGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEYAP 105 (281)
T ss_pred ccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEEecC
Confidence 35689999999999999 56788999999976422 234678999999999999999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
+|.+...+...... ++++.....++.|+|.||.|+|.++|+||||||+|+|++.++..||+|||.+.....
T Consensus 106 ~gel~k~L~~~~~~---~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~------ 176 (281)
T KOG0580|consen 106 RGELYKDLQEGRMK---RFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS------ 176 (281)
T ss_pred CchHHHHHHhcccc---cccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCC------
Confidence 99999999865543 488899999999999999999999999999999999999999999999999865421
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
......|||..|.+||...+..++..+|+|++|++.||++.|.+||..
T Consensus 177 --------------------------------~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes 224 (281)
T KOG0580|consen 177 --------------------------------NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFES 224 (281)
T ss_pred --------------------------------CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhh
Confidence 124467899999999999999999999999999999999999999976
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
.. ..+.+......++..+........++|.+|+..+|.+|.+..|+++.
T Consensus 225 ~~-------------~~etYkrI~k~~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 225 QS-------------HSETYKRIRKVDLKFPSTISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred hh-------------hHHHHHHHHHccccCCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 42 12222333333333344467788999999999999999999999863
No 43
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=8.8e-39 Score=351.85 Aligned_cols=257 Identities=26% Similarity=0.330 Sum_probs=200.0
Q ss_pred cceeccccCceEEEEEEe------CCCcEEEEEEcCCCc-hhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEE
Q 003847 479 SAYILGASGSSIMYKAVL------EDGTALAVRRIGENS-VDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIY 550 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~ 550 (791)
..+.||+|+||.||+|+. .++..||||+++... ....+.+.+|+++++.+ +||||+++++++...+..++||
T Consensus 39 ~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~ 118 (375)
T cd05104 39 FGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVIT 118 (375)
T ss_pred hhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeee
Confidence 357999999999999963 346789999997542 33446788999999999 8999999999999999999999
Q ss_pred eccCCCChhHHHHhhcCC--------------------------------------------------------------
Q 003847 551 DFVPNGSLANARYRKMGS-------------------------------------------------------------- 568 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~-------------------------------------------------------------- 568 (791)
||+++|+|.+++......
T Consensus 119 E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (375)
T cd05104 119 EYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQD 198 (375)
T ss_pred hhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecccc
Confidence 999999999998754210
Q ss_pred --------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCCcc
Q 003847 569 --------SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSAR 640 (791)
Q Consensus 569 --------~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~ 640 (791)
....+++..+..++.||+.||+|||+.+|+||||||+|||++.++.+||+|||+++..........
T Consensus 199 ~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~------ 272 (375)
T cd05104 199 VTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVV------ 272 (375)
T ss_pred cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccc------
Confidence 012478899999999999999999999999999999999999999999999999986543211000
Q ss_pred ccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhccccCC
Q 003847 641 NFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDELGQG 719 (791)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~~ 719 (791)
.....++..|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus 273 ----------------------------~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~- 323 (375)
T cd05104 273 ----------------------------KGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD- 323 (375)
T ss_pred ----------------------------cCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch-
Confidence 001225667999999999999999999999999999998 77788543111
Q ss_pred CCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 720 NGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
............... +...+.++.+|+.+||+.||++||++.||++.|++.
T Consensus 324 --------~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 324 --------SKFYKMIKEGYRMLS--PECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred --------HHHHHHHHhCccCCC--CCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 111112221111111 111345788999999999999999999999999863
No 44
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=7.3e-39 Score=352.18 Aligned_cols=260 Identities=23% Similarity=0.325 Sum_probs=201.6
Q ss_pred hhcceeccccCceEEEEEEe------CCCcEEEEEEcCCCc-hhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEE
Q 003847 477 KASAYILGASGSSIMYKAVL------EDGTALAVRRIGENS-VDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLI 548 (791)
Q Consensus 477 ~~~~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 548 (791)
+...+.||+|+||.||+|+. .++..||||+++... ....+.+.+|+++++.+ +|+||+++++++...+..++
T Consensus 40 ~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~l 119 (374)
T cd05106 40 LQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLV 119 (374)
T ss_pred ceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEE
Confidence 33457899999999999873 234589999997643 33456788999999999 89999999999999999999
Q ss_pred EEeccCCCChhHHHHhhcC-------------------------------------------------------------
Q 003847 549 IYDFVPNGSLANARYRKMG------------------------------------------------------------- 567 (791)
Q Consensus 549 v~e~~~~gsL~~~l~~~~~------------------------------------------------------------- 567 (791)
||||+++|+|.+++.....
T Consensus 120 v~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (374)
T cd05106 120 ITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKD 199 (374)
T ss_pred eHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccccc
Confidence 9999999999999865321
Q ss_pred ----CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCCccccC
Q 003847 568 ----SSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFG 643 (791)
Q Consensus 568 ----~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~ 643 (791)
....++++..+++|+.||+.||+|||++||+||||||+|||+++++.+||+|||+++.+.......
T Consensus 200 ~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~---------- 269 (374)
T cd05106 200 EEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYV---------- 269 (374)
T ss_pred hhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCccee----------
Confidence 001247889999999999999999999999999999999999999999999999987653221100
Q ss_pred CcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhccccCCCCc
Q 003847 644 SKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDELGQGNGL 722 (791)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~~~~~ 722 (791)
......++..|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 270 ------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~---- 321 (374)
T cd05106 270 ------------------------VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN---- 321 (374)
T ss_pred ------------------------eccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc----
Confidence 0011225667999999998899999999999999999997 99998653211
Q ss_pred chhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 723 LVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
............... ....+.++.+++.+||+.||++||++.+++++|+++.
T Consensus 322 -----~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 322 -----SKFYKMVKRGYQMSR--PDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred -----HHHHHHHHcccCccC--CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 011111111111111 1113467889999999999999999999999998763
No 45
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-39 Score=344.55 Aligned_cols=245 Identities=25% Similarity=0.298 Sum_probs=209.4
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccCc-eEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDE-KLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-~~lv~e~~~~ 555 (791)
-+.+|+|+||.++.+++ .++..||+|.+.-. .....+..++|+.++++++|||||.+.+.|.+++. .+|||+||+|
T Consensus 9 ~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eG 88 (426)
T KOG0589|consen 9 LRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEG 88 (426)
T ss_pred hhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCC
Confidence 46899999999999994 46789999998653 23334578899999999999999999999999998 8999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|++.+.+.+..+. .++++.+..|+.|++.|++|||+++|+|||||+.||+++.++.+||+|||+|+.+.....
T Consensus 89 g~l~~~i~~~k~~---~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~---- 161 (426)
T KOG0589|consen 89 GDLAQLIKEQKGV---LFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDS---- 161 (426)
T ss_pred CCHHHHHHHHhhc---cccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCchh----
Confidence 9999999887643 499999999999999999999999999999999999999999999999999998875431
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
...+..||+.||.||++.+.+|+.|+|||||||++|||++-+++|...
T Consensus 162 --------------------------------~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~ 209 (426)
T KOG0589|consen 162 --------------------------------LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKAS 209 (426)
T ss_pred --------------------------------hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCcc
Confidence 123567999999999999999999999999999999999999999654
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcC-ccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRAD-FEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
. ...++....... .+.+.....++..++..|+..+|+.||++.+++.+
T Consensus 210 ~-------------m~~Li~ki~~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 210 N-------------MSELILKINRGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred c-------------hHHHHHHHhhccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 2 233333333333 23344477889999999999999999999999986
No 46
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.7e-40 Score=334.22 Aligned_cols=255 Identities=22% Similarity=0.306 Sum_probs=191.1
Q ss_pred cceeccccCceEEEEEE-eCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCc-----eEEEEec
Q 003847 479 SAYILGASGSSIMYKAV-LEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDE-----KLIIYDF 552 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-----~~lv~e~ 552 (791)
..+++|.|+||.||+|. .++++.||||++-.+... -.+|+++|++++|||||++.-+|....+ ..+||||
T Consensus 28 ~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVley 103 (364)
T KOG0658|consen 28 AVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEY 103 (364)
T ss_pred eeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHh
Confidence 45799999999999999 456799999998665332 2468999999999999999998875432 2489999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCC-CCeEEeccCcccccCCCCC
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGND-MEPKIGDFGLERLVTGDTS 631 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~-~~~kL~DFGla~~~~~~~~ 631 (791)
|+. +|.++++..... ..+++...++-+..||.+||+|||+.||+||||||+|+|+|.+ |.+||||||.|+.+.....
T Consensus 104 mP~-tL~~~~r~~~~~-~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~ep 181 (364)
T KOG0658|consen 104 MPE-TLYRVIRHYTRA-NQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEP 181 (364)
T ss_pred chH-HHHHHHHHHhhc-CCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeeccCCC
Confidence 975 899988753211 1248889999999999999999999999999999999999966 9999999999998864432
Q ss_pred CCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCc
Q 003847 632 SSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~ 710 (791)
. .++.-|..|+|||.+.+ ..|+.+.||||.|||+.||+-|++
T Consensus 182 n-------------------------------------iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~p 224 (364)
T KOG0658|consen 182 N-------------------------------------ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQP 224 (364)
T ss_pred c-------------------------------------eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCc
Confidence 1 23446788999999876 568999999999999999999999
Q ss_pred chhccccCCCCcc------------hhchhHH-HHHHHHhhhcCcc---chHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 003847 711 IVVDELGQGNGLL------------VEDKNRA-IRLADAAIRADFE---GKEEALLSCFKLGYSCASPLPQKRPSMKEAL 774 (791)
Q Consensus 711 pf~~~~~~~~~~~------------~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 774 (791)
.|.++........ +..+... .+...+.+....- .......+..+|+.+++.++|.+|.++.|++
T Consensus 225 lFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l 304 (364)
T KOG0658|consen 225 LFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEAL 304 (364)
T ss_pred ccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHh
Confidence 9977543111000 0000000 0000011111100 1122456789999999999999999999988
Q ss_pred HH
Q 003847 775 QA 776 (791)
Q Consensus 775 ~~ 776 (791)
..
T Consensus 305 ~h 306 (364)
T KOG0658|consen 305 AH 306 (364)
T ss_pred cc
Confidence 64
No 47
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-39 Score=371.69 Aligned_cols=265 Identities=26% Similarity=0.388 Sum_probs=215.8
Q ss_pred cceeccccCceEEEEEEeCC--Cc----EEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEe
Q 003847 479 SAYILGASGSSIMYKAVLED--GT----ALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYD 551 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~--g~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 551 (791)
...+||+|.||.||+|...+ |. .||||.+++. +.+...+|.+|..+|++++|||||+++|++.+....+|++|
T Consensus 696 l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~le 775 (1025)
T KOG1095|consen 696 LLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLE 775 (1025)
T ss_pred eeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEeh
Confidence 45789999999999999543 33 4999999875 55667899999999999999999999999999999999999
Q ss_pred ccCCCChhHHHHhhcCCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCC
Q 003847 552 FVPNGSLANARYRKMGSS--PCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGD 629 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~--~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 629 (791)
||++|+|..+|++.+... +..++..+.+.++.|||+|++||+++++|||||..+|+|+++...|||+|||+|+.+-..
T Consensus 776 yM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~ 855 (1025)
T KOG1095|consen 776 YMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLARDIYDK 855 (1025)
T ss_pred hcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhHhhhhc
Confidence 999999999998763221 235899999999999999999999999999999999999999999999999999965433
Q ss_pred CCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-C
Q 003847 630 TSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-G 708 (791)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G 708 (791)
+.....+.. .-...|||||.++.+.++.|+|||||||++||++| |
T Consensus 856 ~yyr~~~~a----------------------------------~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG 901 (1025)
T KOG1095|consen 856 DYYRKHGEA----------------------------------MLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLG 901 (1025)
T ss_pred hheeccCcc----------------------------------ccceecCCHHHHhhcccccccchhhhHHHHHHHHhCC
Confidence 322211100 01134999999999999999999999999999999 6
Q ss_pred CcchhccccCCCCcchhchhHHHHHHH-HhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCCCCCC
Q 003847 709 KVIVVDELGQGNGLLVEDKNRAIRLAD-AAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSSPSPY 787 (791)
Q Consensus 709 ~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~p~ 787 (791)
..||.+... .++.. ....+..+.+..++..++++|..||+.+|++||++..+++++..|.....++
T Consensus 902 ~~PY~~~~n-------------~~v~~~~~~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~~ 968 (1025)
T KOG1095|consen 902 ATPYPSRSN-------------FEVLLDVLEGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALGT 968 (1025)
T ss_pred CCCCCCcch-------------HHHHHHHHhCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhccC
Confidence 668865321 11111 2222345555667889999999999999999999999999999987776666
Q ss_pred cCC
Q 003847 788 LYG 790 (791)
Q Consensus 788 ~~~ 790 (791)
-|.
T Consensus 969 ~~~ 971 (1025)
T KOG1095|consen 969 IYG 971 (1025)
T ss_pred ccc
Confidence 554
No 48
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=6.5e-39 Score=346.15 Aligned_cols=241 Identities=18% Similarity=0.247 Sum_probs=195.4
Q ss_pred eeccccCceEEEEEEe----CCCcEEEEEEcCCCc----hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEec
Q 003847 481 YILGASGSSIMYKAVL----EDGTALAVRRIGENS----VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDF 552 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~----~~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 552 (791)
+.||+|+||.||+++. .+++.||||+++... ......+.+|++++++++||||+++++++..++..|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 4799999999999984 357899999987532 22335678899999999999999999999999999999999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCC
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 632 (791)
+++++|.+++.... .+++..+..++.|++.||+|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~~~~~L~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 155 (323)
T cd05584 82 LSGGELFMHLEREG-----IFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT- 155 (323)
T ss_pred CCCchHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC-
Confidence 99999999887643 378899999999999999999999999999999999999999999999999875321110
Q ss_pred CcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcch
Q 003847 633 SKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIV 712 (791)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf 712 (791)
......||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 156 -----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf 200 (323)
T cd05584 156 -----------------------------------VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPF 200 (323)
T ss_pred -----------------------------------cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCC
Confidence 111245899999999999888999999999999999999999999
Q ss_pred hccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 003847 713 VDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRP-----SMKEALQ 775 (791)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 775 (791)
..... .........+....+......+.+++.+||+.||++|| ++.++++
T Consensus 201 ~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 201 TAENR-------------KKTIDKILKGKLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred CCCCH-------------HHHHHHHHcCCCCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 65321 11122222222222223456788999999999999999 7888766
No 49
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-40 Score=312.09 Aligned_cols=265 Identities=23% Similarity=0.302 Sum_probs=206.9
Q ss_pred cceeccccCceEEEEEE-eCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccC-----ceEEEEec
Q 003847 479 SAYILGASGSSIMYKAV-LEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVD-----EKLIIYDF 552 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-----~~~lv~e~ 552 (791)
....||+|||+.||.++ ..+++.+|+|++.....+..+...+|++..++++|||+++++++...+. +.|++++|
T Consensus 25 i~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Py 104 (302)
T KOG2345|consen 25 IQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPY 104 (302)
T ss_pred EeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeeh
Confidence 35689999999999999 7789999999998887778889999999999999999999999875443 48999999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--CeecCCCCCCeEecCCCCeEEeccCcccccCCCC
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKK--HVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~--ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 630 (791)
...|+|.+.+.....++. .+++.+++.|+.+|++||++||+.. ++||||||.|||+.+++.++|.|||.+....-..
T Consensus 105 y~~Gsl~d~i~~~k~kg~-~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i 183 (302)
T KOG2345|consen 105 YKRGSLLDEIERLKIKGN-FVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQI 183 (302)
T ss_pred hccccHHHHHHHHhhcCC-ccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccccceEe
Confidence 999999999987665443 5999999999999999999999977 9999999999999999999999999988654221
Q ss_pred CCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc---CCCCCCchhhHHHHHHHHHHHh
Q 003847 631 SSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR---SIKPNPKWDVYSFGVILLELLT 707 (791)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~---~~~~~~~sDvwSlGvil~ellt 707 (791)
......... +.-....-|..|+|||.+. +...++++|||||||++|+|+.
T Consensus 184 ~~~~~a~~l---------------------------Qe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf 236 (302)
T KOG2345|consen 184 EGSRQALRL---------------------------QEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMF 236 (302)
T ss_pred echHHHHHH---------------------------HHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHH
Confidence 111000000 0001122577899999984 4567899999999999999999
Q ss_pred CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 708 GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 708 G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
|..||.....+.....+.-.. ..+ .++.....+..+.+++..|++.||.+||++.+++..++.+
T Consensus 237 ~~sPfe~~~~~GgSlaLAv~n-------~q~--s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 237 GESPFERIYQQGGSLALAVQN-------AQI--SIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred cCCcchHHhhcCCeEEEeeec-------ccc--ccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 999997643322111111100 000 1111112667889999999999999999999999998765
No 50
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.8e-38 Score=333.06 Aligned_cols=252 Identities=21% Similarity=0.314 Sum_probs=199.7
Q ss_pred hcceeccccCceEEEEEEeC----CCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEec
Q 003847 478 ASAYILGASGSSIMYKAVLE----DGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDF 552 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 552 (791)
...++||+|+||.||+|... .+..||+|.++... ....+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 8 ~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 87 (266)
T cd05064 8 KIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEY 87 (266)
T ss_pred EEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEe
Confidence 34578999999999999742 46799999998653 33346789999999999999999999999999999999999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCC
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 632 (791)
+++|+|.+++..... .+++..++.++.|++.||+|||+.|++||||||+||+++.++.+|++|||.+.........
T Consensus 88 ~~~~~L~~~l~~~~~----~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~ 163 (266)
T cd05064 88 MSNGALDSFLRKHEG----QLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIY 163 (266)
T ss_pred CCCCcHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccchh
Confidence 999999999876432 3899999999999999999999999999999999999999999999999986543211000
Q ss_pred CcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcc
Q 003847 633 SKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVI 711 (791)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~p 711 (791)
......++..|+|||.+.+..++.++|||||||++||+++ |+.|
T Consensus 164 -----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p 208 (266)
T cd05064 164 -----------------------------------TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERP 208 (266)
T ss_pred -----------------------------------cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCC
Confidence 0001225677999999999999999999999999999775 9999
Q ss_pred hhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 712 VVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 712 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
|.+.... .....+.+. . ..+.....+..+.+++.+||+.+|++||+++++++.|+++
T Consensus 209 ~~~~~~~---------~~~~~~~~~-~--~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 209 YWDMSGQ---------DVIKAVEDG-F--RLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred cCcCCHH---------HHHHHHHCC-C--CCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 8653211 011111111 0 1112223456788999999999999999999999999764
No 51
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.5e-38 Score=322.93 Aligned_cols=281 Identities=20% Similarity=0.262 Sum_probs=210.7
Q ss_pred eeccccCceEEEEEEeC-CCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 481 YILGASGSSIMYKAVLE-DGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
..||.|.-|+||+++.. ++..+|+|++.+.. .....+.+.|-+||+.++||.++.||+.|+.++..|+|||||+||
T Consensus 83 k~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGG 162 (459)
T KOG0610|consen 83 KRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGG 162 (459)
T ss_pred HHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCc
Confidence 47999999999999965 46999999998753 334567888999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|..+++++.++ .+++..++-++..|+-||+|||..|||.|||||+||||.++|.+.|+||.++.............
T Consensus 163 dL~~LrqkQp~~---~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~ 239 (459)
T KOG0610|consen 163 DLHSLRQKQPGK---RFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSS 239 (459)
T ss_pred cHHHHHhhCCCC---ccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccC
Confidence 999988877654 49999999999999999999999999999999999999999999999999987663221111100
Q ss_pred CCccccCCc-cccccccccc------------------CCCCCC-CCCCCCCCCCCCCCCcccCcccccCCCCCCchhhH
Q 003847 637 GSARNFGSK-RSTASRDSFQ------------------DLGPGP-SPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVY 696 (791)
Q Consensus 637 ~~~~~~~~~-~~~~~~~~~~------------------~~~~~~-~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvw 696 (791)
......... ........|. ...+.. +........+++||-.|.|||++.+...+.++|.|
T Consensus 240 ~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWW 319 (459)
T KOG0610|consen 240 SPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWW 319 (459)
T ss_pred CCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhhHH
Confidence 000000000 0000000000 000001 12233456678999999999999999999999999
Q ss_pred HHHHHHHHHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCC----HHH
Q 003847 697 SFGVILLELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPS----MKE 772 (791)
Q Consensus 697 SlGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs----~~e 772 (791)
+|||++|||+.|+.||.+.... .....++...+ .++.....+..+.|||+++|.+||.+|.- +.|
T Consensus 320 tfGIflYEmLyG~TPFKG~~~~---------~Tl~NIv~~~l--~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~e 388 (459)
T KOG0610|consen 320 TFGIFLYEMLYGTTPFKGSNNK---------ETLRNIVGQPL--KFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAE 388 (459)
T ss_pred HHHHHHHHHHhCCCCcCCCCch---------hhHHHHhcCCC--cCCCCCcchhHHHHHHHHHhccChhhhhccccchHH
Confidence 9999999999999999775321 12222222221 22333346788999999999999999997 777
Q ss_pred HHH
Q 003847 773 ALQ 775 (791)
Q Consensus 773 vl~ 775 (791)
|.+
T Consensus 389 IK~ 391 (459)
T KOG0610|consen 389 IKR 391 (459)
T ss_pred hhc
Confidence 755
No 52
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=2.4e-38 Score=339.02 Aligned_cols=260 Identities=22% Similarity=0.266 Sum_probs=196.6
Q ss_pred ceeccccCceEEEEEEeCC-----------------CcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEE
Q 003847 480 AYILGASGSSIMYKAVLED-----------------GTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~-----------------g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~ 541 (791)
.+.||+|+||.||+|..++ +..||+|.+.... .....++.+|++++++++||||+++++++.
T Consensus 10 ~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 89 (304)
T cd05096 10 KEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCV 89 (304)
T ss_pred eeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEe
Confidence 4689999999999997432 3479999997643 334567999999999999999999999999
Q ss_pred ccCceEEEEeccCCCChhHHHHhhcCC--------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCe
Q 003847 542 GVDEKLIIYDFVPNGSLANARYRKMGS--------------SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNV 607 (791)
Q Consensus 542 ~~~~~~lv~e~~~~gsL~~~l~~~~~~--------------~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NI 607 (791)
+.+..++||||+++|+|.+++...... ....+++..+..++.||+.||+|||+.||+||||||+||
T Consensus 90 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Ni 169 (304)
T cd05096 90 DEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNC 169 (304)
T ss_pred cCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhhe
Confidence 999999999999999999988654211 012478889999999999999999999999999999999
Q ss_pred EecCCCCeEEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC
Q 003847 608 LLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI 687 (791)
Q Consensus 608 Ll~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~ 687 (791)
|++.++.+||+|||+++.+....... ......++..|+|||++.+.
T Consensus 170 ll~~~~~~kl~DfG~~~~~~~~~~~~----------------------------------~~~~~~~~~~y~aPE~~~~~ 215 (304)
T cd05096 170 LVGENLTIKIADFGMSRNLYAGDYYR----------------------------------IQGRAVLPIRWMAWECILMG 215 (304)
T ss_pred EEcCCccEEECCCccceecccCceeE----------------------------------ecCcCCCCccccCHHHHhcC
Confidence 99999999999999987653221100 01122357789999999888
Q ss_pred CCCCchhhHHHHHHHHHHHhC--CcchhccccCCCCcchhchhHHHHHHHHhhhc-CccchHHHHHHHHHHHhhccCCCC
Q 003847 688 KPNPKWDVYSFGVILLELLTG--KVIVVDELGQGNGLLVEDKNRAIRLADAAIRA-DFEGKEEALLSCFKLGYSCASPLP 764 (791)
Q Consensus 688 ~~~~~sDvwSlGvil~elltG--~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP 764 (791)
.++.++||||||+++|||+++ ..||....... .+.. ........... ........+..+.+++.+||+.||
T Consensus 216 ~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p 289 (304)
T cd05096 216 KFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQ---VIEN---AGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDC 289 (304)
T ss_pred CCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHH---HHHH---HHHHhhhccccccccCCCCCCHHHHHHHHHHccCCc
Confidence 899999999999999999874 45665421110 0000 01111110000 000111245678999999999999
Q ss_pred CCCCCHHHHHHHhcc
Q 003847 765 QKRPSMKEALQALEK 779 (791)
Q Consensus 765 ~~RPs~~evl~~L~~ 779 (791)
++|||+.||.+.|++
T Consensus 290 ~~RPs~~~i~~~l~~ 304 (304)
T cd05096 290 RERPSFSDIHAFLTE 304 (304)
T ss_pred hhCcCHHHHHHHHhC
Confidence 999999999998864
No 53
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-39 Score=360.37 Aligned_cols=269 Identities=22% Similarity=0.275 Sum_probs=211.1
Q ss_pred HHhhhcceeccccCceEEEEEEeCCC-cEEEEEEcCCCchhhHHHHHHHHHHHhccC-CCCccceee-EEEc------cC
Q 003847 474 TLLKASAYILGASGSSIMYKAVLEDG-TALAVRRIGENSVDRFRDFETQVRVIAKLV-HPNLVRIRG-FYWG------VD 544 (791)
Q Consensus 474 ~~~~~~~~~lG~G~~g~Vy~~~~~~g-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~-~~~~------~~ 544 (791)
.......++|.+|||+.||.|....+ ..||+|++-..+....+...+|+++|++|+ |+|||.|++ .... .-
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW 115 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence 33334467999999999999996665 999999998777888899999999999997 999999999 3322 13
Q ss_pred ceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--CeecCCCCCCeEecCCCCeEEeccCc
Q 003847 545 EKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKK--HVHGNLKPRNVLLGNDMEPKIGDFGL 622 (791)
Q Consensus 545 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~--ivHrDlkp~NILl~~~~~~kL~DFGl 622 (791)
+.+|+||||.||.|-|++..+...+ |++.++++|+.|+++|+++||... |||||||-+||||+.++..||||||.
T Consensus 116 EvllLmEyC~gg~Lvd~mn~Rlq~~---lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGS 192 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSLVDFMNTRLQTR---LTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGS 192 (738)
T ss_pred EEEeehhhccCCcHHHHHHHHHhcc---CChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccc
Confidence 6789999999999999998766543 999999999999999999999865 99999999999999999999999999
Q ss_pred ccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccc---cCCCCCCchhhHHHH
Q 003847 623 ERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESL---RSIKPNPKWDVYSFG 699 (791)
Q Consensus 623 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~---~~~~~~~~sDvwSlG 699 (791)
|............ ... .. .--...-|+.|+|||++ .+...++|+|||+||
T Consensus 193 att~~~~~~~~~e----------~~~-ve----------------~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALG 245 (738)
T KOG1989|consen 193 ATTKILSPTSAQE----------VNY-VE----------------EEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALG 245 (738)
T ss_pred cccccCCCccHHH----------HHH-HH----------------HHHHhhCCccccChHHHhhhcCCCCcchhHHHHHH
Confidence 8754322211000 000 00 00011268899999987 577889999999999
Q ss_pred HHHHHHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhcc
Q 003847 700 VILLELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779 (791)
Q Consensus 700 vil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 779 (791)
|+||-|+....||++... ..+.... . .++........+.+||+.||+.||++||++-+|+..+.+
T Consensus 246 clLYkLCy~t~PFe~sg~----laIlng~---------Y--~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~ 310 (738)
T KOG1989|consen 246 CLLYKLCYFTTPFEESGK----LAILNGN---------Y--SFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFE 310 (738)
T ss_pred HHHHHHHHhCCCcCcCcc----eeEEecc---------c--cCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHH
Confidence 999999999999976411 0111110 0 122223478899999999999999999999999999999
Q ss_pred CCCCCCCC
Q 003847 780 IPSSPSPY 787 (791)
Q Consensus 780 i~~~~~p~ 787 (791)
|...+.|.
T Consensus 311 l~~~~~~~ 318 (738)
T KOG1989|consen 311 LANKPCPI 318 (738)
T ss_pred HhcCCCCc
Confidence 98777654
No 54
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=4.6e-39 Score=347.73 Aligned_cols=242 Identities=21% Similarity=0.249 Sum_probs=195.7
Q ss_pred eeccccCceEEEEEEe-CCCcEEEEEEcCCC---chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 481 YILGASGSSIMYKAVL-EDGTALAVRRIGEN---SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
++||+|+||.||++.. .+|+.||+|++... .......+..|+++++.++||||+++++++...+..|+||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 3689999999999984 57899999999753 2233456788999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE-KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
+|.+++.... .+++..+..++.||+.||+|||+ .||+||||||+|||++.++.+||+|||+++.......
T Consensus 81 ~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~---- 151 (325)
T cd05594 81 ELFFHLSRER-----VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA---- 151 (325)
T ss_pred cHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc----
Confidence 9998876543 38999999999999999999997 8999999999999999999999999999875321110
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 152 --------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~ 199 (325)
T cd05594 152 --------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 199 (325)
T ss_pred --------------------------------ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCC
Confidence 111345899999999999989999999999999999999999999643
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRP-----SMKEALQA 776 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 776 (791)
.. ..............+......+.+++.+||+.||++|+ ++.++++.
T Consensus 200 ~~-------------~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 200 DH-------------EKLFELILMEEIRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred CH-------------HHHHHHHhcCCCCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 11 11111111112222222456788999999999999996 89998753
No 55
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2.1e-38 Score=335.17 Aligned_cols=248 Identities=18% Similarity=0.248 Sum_probs=196.3
Q ss_pred ccccCceEEEEEEe-CCCcEEEEEEcCCCch---hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 483 LGASGSSIMYKAVL-EDGTALAVRRIGENSV---DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 483 lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
||+|+||+||++.. .+++.||||.+..... ...+.+..|++++++++|+||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 69999999999984 4789999999865422 2335678899999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++...... ...+++..+..++.||+.||+|||+.+|+||||||+||+++.++.+||+|||++..+.....
T Consensus 81 ~~~~~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~------- 152 (280)
T cd05608 81 RYHIYNVDEE-NPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS------- 152 (280)
T ss_pred HHHHHhcccc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-------
Confidence 9887643221 12489999999999999999999999999999999999999999999999999876542211
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccccC
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQ 718 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~ 718 (791)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 153 -----------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~ 203 (280)
T cd05608 153 -----------------------------KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK 203 (280)
T ss_pred -----------------------------cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcc
Confidence 011235889999999999999999999999999999999999999653211
Q ss_pred CCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 003847 719 GNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRP-----SMKEALQA 776 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 776 (791)
.. ...................+..+.+++.+||+.||++|| +++++++.
T Consensus 204 ~~---------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 204 VE---------NKELKQRILNDSVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred hh---------HHHHHHhhcccCCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 00 011111112222222223556788999999999999999 77888753
No 56
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=9.1e-39 Score=346.70 Aligned_cols=241 Identities=20% Similarity=0.229 Sum_probs=196.2
Q ss_pred cceeccccCceEEEEEEeCC--CcEEEEEEcCCC---chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEecc
Q 003847 479 SAYILGASGSSIMYKAVLED--GTALAVRRIGEN---SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~--g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
....||+|+||.||+|...+ +..||+|++... .....+.+.+|+++++.++||||+++++++.+.+..|+||||+
T Consensus 34 ~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~ 113 (340)
T PTZ00426 34 FIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFV 113 (340)
T ss_pred EEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeCC
Confidence 35689999999999998433 368999998643 2233457889999999999999999999999999999999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
++|+|.+++.... .+++..+..++.|++.||+|||+.||+||||||+|||++.++.+||+|||+++.+....
T Consensus 114 ~~g~L~~~i~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~--- 185 (340)
T PTZ00426 114 IGGEFFTFLRRNK-----RFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRT--- 185 (340)
T ss_pred CCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCCc---
Confidence 9999999987654 38999999999999999999999999999999999999999999999999987653210
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
...+||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 186 ------------------------------------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~ 229 (340)
T PTZ00426 186 ------------------------------------YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFY 229 (340)
T ss_pred ------------------------------------ceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCC
Confidence 12358999999999998889999999999999999999999996
Q ss_pred ccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 003847 714 DELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRP-----SMKEALQA 776 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 776 (791)
..... ........+....+......+.+++.+|++.||++|+ +++++++.
T Consensus 230 ~~~~~-------------~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 230 ANEPL-------------LIYQKILEGIIYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred CCCHH-------------HHHHHHhcCCCCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 53211 1111112222222222445678999999999999995 88888764
No 57
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.1e-38 Score=342.14 Aligned_cols=254 Identities=22% Similarity=0.299 Sum_probs=197.8
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
...||+|+||.||+++.. ++..||+|.+.... ....+.+.+|++++++++||||+++++++...+..++||||+++++
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 89 (331)
T cd06649 10 ISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGS 89 (331)
T ss_pred EEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCCc
Confidence 468999999999999954 68999999987642 3345679999999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK-KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~-~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++.......
T Consensus 90 L~~~l~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~------ 158 (331)
T cd06649 90 LDQVLKEAK-----RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM------ 158 (331)
T ss_pred HHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccc------
Confidence 999987643 389999999999999999999985 69999999999999999999999999987553211
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 159 --------------------------------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~ 206 (331)
T cd06649 159 --------------------------------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPD 206 (331)
T ss_pred --------------------------------cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 112348899999999999899999999999999999999999985321
Q ss_pred cCCCCcc---------------------------------hhchhHHHHHHHHhhhcCccc--hHHHHHHHHHHHhhccC
Q 003847 717 GQGNGLL---------------------------------VEDKNRAIRLADAAIRADFEG--KEEALLSCFKLGYSCAS 761 (791)
Q Consensus 717 ~~~~~~~---------------------------------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~ 761 (791)
....... ........+..+.......+. ......++.+|+.+||+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~ 286 (331)
T cd06649 207 AKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLI 286 (331)
T ss_pred HHHHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHcc
Confidence 1000000 000000111111111111000 11145678999999999
Q ss_pred CCCCCCCCHHHHHHH
Q 003847 762 PLPQKRPSMKEALQA 776 (791)
Q Consensus 762 ~dP~~RPs~~evl~~ 776 (791)
.||++|||++|+++.
T Consensus 287 ~~P~~Rpt~~ell~h 301 (331)
T cd06649 287 KNPAERADLKMLMNH 301 (331)
T ss_pred CCcccCCCHHHHhcC
Confidence 999999999999875
No 58
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.1e-38 Score=343.69 Aligned_cols=235 Identities=23% Similarity=0.284 Sum_probs=190.6
Q ss_pred eccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEeccCCC
Q 003847 482 ILGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
+||+|+||.||+|+. .+++.||||++.... ....+.+..|.+++..+ +||||+++++++...+..|+||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g 81 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGG 81 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCc
Confidence 689999999999995 468999999987532 23345677888888876 6999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++.... .+++..+..++.|++.||+|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~L~~~i~~~~-----~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~----- 151 (320)
T cd05590 82 DLMFHIQKSR-----RFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGK----- 151 (320)
T ss_pred hHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCC-----
Confidence 9998887653 389999999999999999999999999999999999999999999999999875321110
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 152 -------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~ 200 (320)
T cd05590 152 -------------------------------TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAEN 200 (320)
T ss_pred -------------------------------cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCC
Confidence 1123458999999999999899999999999999999999999996532
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCH
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSM 770 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 770 (791)
. .++...........+......+.+++.+||+.||++||++
T Consensus 201 ~-------------~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 201 E-------------DDLFEAILNDEVVYPTWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred H-------------HHHHHHHhcCCCCCCCCCCHHHHHHHHHHcccCHHHCCCC
Confidence 1 1111122222222222245678899999999999999998
No 59
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=3.3e-38 Score=335.12 Aligned_cols=263 Identities=24% Similarity=0.366 Sum_probs=208.8
Q ss_pred cceeccccCceEEEEEEe------CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEec
Q 003847 479 SAYILGASGSSIMYKAVL------EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDF 552 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 552 (791)
..+.||+|+||.||++.. .++..+|+|.+........+.+.+|++++++++|+||+++++++...+..++||||
T Consensus 9 ~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 88 (288)
T cd05093 9 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEY 88 (288)
T ss_pred eccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEc
Confidence 356899999999999984 23567999999876666667899999999999999999999999999999999999
Q ss_pred cCCCChhHHHHhhcC--------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCccc
Q 003847 553 VPNGSLANARYRKMG--------SSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~--------~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~ 624 (791)
+++++|.+++..... .....+++..++.++.|++.||+|||+.|++||||||+||++++++.+||+|||+++
T Consensus 89 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~ 168 (288)
T cd05093 89 MKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSR 168 (288)
T ss_pred CCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEeccCCccc
Confidence 999999999875431 112348999999999999999999999999999999999999999999999999988
Q ss_pred ccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHH
Q 003847 625 LVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLE 704 (791)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~e 704 (791)
.+....... ......++..|+|||++.+..++.++|||||||++||
T Consensus 169 ~~~~~~~~~----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~ 214 (288)
T cd05093 169 DVYSTDYYR----------------------------------VGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWE 214 (288)
T ss_pred cccCCceee----------------------------------cCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHH
Confidence 653221100 0011235678999999998889999999999999999
Q ss_pred HHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCc-cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCC
Q 003847 705 LLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADF-EGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPS 782 (791)
Q Consensus 705 llt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 782 (791)
|++ |+.||...... +..+....+.. ......+..+.+++.+||+.||.+|||+.|+++.|+++..
T Consensus 215 l~t~g~~p~~~~~~~-------------~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~ 281 (288)
T cd05093 215 IFTYGKQPWYQLSNN-------------EVIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK 281 (288)
T ss_pred HHhCCCCCCCCCCHH-------------HHHHHHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 999 88888543210 11111111111 1111244678999999999999999999999999999987
Q ss_pred CCCCCc
Q 003847 783 SPSPYL 788 (791)
Q Consensus 783 ~~~p~~ 788 (791)
....|+
T Consensus 282 ~~~~~~ 287 (288)
T cd05093 282 ASPVYL 287 (288)
T ss_pred hccccc
Confidence 665553
No 60
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3e-38 Score=358.06 Aligned_cols=249 Identities=20% Similarity=0.215 Sum_probs=201.1
Q ss_pred cceeccccCceEEEEEEe-CC-CcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 479 SAYILGASGSSIMYKAVL-ED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
..+.||+|++|.||+|.. .+ ++.||+|.+..........+.+|+++++.++|||||++++++...+..|+||||+++|
T Consensus 71 ~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg 150 (478)
T PTZ00267 71 LTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGG 150 (478)
T ss_pred EEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCCC
Confidence 457899999999999984 34 6889999886665555567888999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++...... ..++++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.+......
T Consensus 151 ~L~~~l~~~~~~-~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~---- 225 (478)
T PTZ00267 151 DLNKQIKQRLKE-HLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL---- 225 (478)
T ss_pred CHHHHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc----
Confidence 999988654321 124889999999999999999999999999999999999999999999999999865432110
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 226 ------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~ 275 (478)
T PTZ00267 226 ------------------------------DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPS 275 (478)
T ss_pred ------------------------------ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 01223569999999999999999999999999999999999999985431
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCcc-chHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFE-GKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
. .++......+... .+......+.+++.+||..||++||++.+++.
T Consensus 276 ~-------------~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 276 Q-------------REIMQQVLYGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred H-------------HHHHHHHHhCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 1 1122222222211 11224567899999999999999999999874
No 61
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=6.5e-39 Score=317.94 Aligned_cols=255 Identities=22% Similarity=0.232 Sum_probs=196.4
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCCchh-h-HHHHHHHHHHHhccCCCCccceeeEEEcc--CceEEEEeccC
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGENSVD-R-FRDFETQVRVIAKLVHPNLVRIRGFYWGV--DEKLIIYDFVP 554 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~-~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv~e~~~ 554 (791)
-+.|++|.||.||+|+ .++++.||+|+++.+... . --...+||.+|.+++|||||.+.++.... +.+|+|||||+
T Consensus 81 lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~E 160 (419)
T KOG0663|consen 81 LNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVE 160 (419)
T ss_pred HhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHH
Confidence 3679999999999999 567999999999765321 1 12457899999999999999999987654 57999999996
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
-+|..+++.... ++...+++-++.|+++|++|||.+.|+||||||+|+|++..|.+||+|||+|+.+....
T Consensus 161 -hDLksl~d~m~q----~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~---- 231 (419)
T KOG0663|consen 161 -HDLKSLMETMKQ----PFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL---- 231 (419)
T ss_pred -hhHHHHHHhccC----CCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCc----
Confidence 489998887652 49999999999999999999999999999999999999999999999999999876431
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
.+.+..+-|.-|+|||.+.+ ..|+++.|+||+|||+.||+++++.|.
T Consensus 232 --------------------------------k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~ 279 (419)
T KOG0663|consen 232 --------------------------------KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFP 279 (419)
T ss_pred --------------------------------ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCC
Confidence 23445667888999999987 568999999999999999999999886
Q ss_pred cccc-----------------CCCCcchhchhH---HHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 003847 714 DELG-----------------QGNGLLVEDKNR---AIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEA 773 (791)
Q Consensus 714 ~~~~-----------------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 773 (791)
+... .|.....-.... .....-..++..+.... ....-.+|+..++.+||++|.|+.|.
T Consensus 280 G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~-lse~g~~Lln~llt~dP~kR~tA~~~ 358 (419)
T KOG0663|consen 280 GKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALS-LSEQGFDLLNKLLTYDPGKRITAEDG 358 (419)
T ss_pred CCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccc-cchhHHHHHHHHhccCccccccHHHh
Confidence 5432 111110000000 00000011222222221 33567889999999999999999999
Q ss_pred HHH
Q 003847 774 LQA 776 (791)
Q Consensus 774 l~~ 776 (791)
|+.
T Consensus 359 L~h 361 (419)
T KOG0663|consen 359 LKH 361 (419)
T ss_pred hcc
Confidence 864
No 62
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.2e-38 Score=343.90 Aligned_cols=241 Identities=21% Similarity=0.256 Sum_probs=193.8
Q ss_pred eccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEeccCCC
Q 003847 482 ILGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
+||+|+||.||+|+. .+++.||||++.... ....+.+..|.+++..+ +||||+++++++...+..|+||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 81 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGG 81 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCC
Confidence 699999999999995 458899999997642 23345677888888866 7999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++.... .+++..+..++.|++.||+|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~----- 151 (321)
T cd05591 82 DLMFQIQRSR-----KFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV----- 151 (321)
T ss_pred cHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCc-----
Confidence 9998886543 389999999999999999999999999999999999999999999999999875321110
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 152 -------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~ 200 (321)
T cd05591 152 -------------------------------TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADN 200 (321)
T ss_pred -------------------------------cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCC
Confidence 1123458999999999999899999999999999999999999996532
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCC-------CHHHHHHH
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRP-------SMKEALQA 776 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-------s~~evl~~ 776 (791)
. ..............+......+.+++.+||+.||++|| ++.++++.
T Consensus 201 ~-------------~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 201 E-------------DDLFESILHDDVLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred H-------------HHHHHHHHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 1 11112222222222222346788999999999999999 77777643
No 63
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-40 Score=356.93 Aligned_cols=256 Identities=23% Similarity=0.430 Sum_probs=211.7
Q ss_pred hhcceeccccCceEEEEEEeC----CCcEEEEEEcCCCchh-hHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEe
Q 003847 477 KASAYILGASGSSIMYKAVLE----DGTALAVRRIGENSVD-RFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYD 551 (791)
Q Consensus 477 ~~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 551 (791)
....++||.|.||.||+|+++ ....||||.++....+ ...+|..|+.||.+++||||++|.|+.......+||+|
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTE 710 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITE 710 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhh
Confidence 344689999999999999964 3468999999986443 45689999999999999999999999999999999999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTS 631 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 631 (791)
||++|+|+.+|..+.+ ++++.+...++++|+.|++||-+.++|||||...|||++.+..+|++|||+++.+.++..
T Consensus 711 yMENGsLDsFLR~~DG----qftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~ 786 (996)
T KOG0196|consen 711 YMENGSLDSFLRQNDG----QFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 786 (996)
T ss_pred hhhCCcHHHHHhhcCC----ceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCCC
Confidence 9999999999998875 399999999999999999999999999999999999999999999999999998765442
Q ss_pred CCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCC--CCcccCcccccCCCCCCchhhHHHHHHHHHHHh-C
Q 003847 632 SSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGG--ISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-G 708 (791)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--t~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G 708 (791)
... +...| ...|.|||.+...+++.++||||||+||||.++ |
T Consensus 787 ~~y-----------------------------------tt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyG 831 (996)
T KOG0196|consen 787 AAY-----------------------------------TTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYG 831 (996)
T ss_pred ccc-----------------------------------cccCCccceeecChhHhhhcccCchhhccccceEEEEecccC
Confidence 211 11122 246999999999999999999999999999877 8
Q ss_pred CcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCC
Q 003847 709 KVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSS 783 (791)
Q Consensus 709 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 783 (791)
..||.+-..+.+ ...++... ..+.+.+++..|.+|+..||++|-.+||.+.+|+..|+++-..
T Consensus 832 ERPYWdmSNQdV----------IkaIe~gy--RLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn 894 (996)
T KOG0196|consen 832 ERPYWDMSNQDV----------IKAIEQGY--RLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN 894 (996)
T ss_pred CCcccccchHHH----------HHHHHhcc--CCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence 888865322211 11111111 2234445788999999999999999999999999999886443
No 64
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-39 Score=345.61 Aligned_cols=250 Identities=26% Similarity=0.348 Sum_probs=207.8
Q ss_pred hcceeccccCceEEEEEE-eCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 478 ASAYILGASGSSIMYKAV-LEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
...-+||+|.||+||-|+ ..+...+|||.+........+-+..|+.+-++|+|.|||+++|.+.+++..-|.||-++||
T Consensus 578 ~ervVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGG 657 (1226)
T KOG4279|consen 578 NERVVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGG 657 (1226)
T ss_pred CceEEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCC
Confidence 345699999999999999 5567889999998877767778999999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEec-CCCCeEEeccCcccccCCCCCCCcC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLG-NDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~-~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
+|.+++..+-+. -+-.+.++-.+.+||++||.|||++.|||||||-+|||++ -.|.+||+|||-++.+..-
T Consensus 658 SLSsLLrskWGP--lKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi------ 729 (1226)
T KOG4279|consen 658 SLSSLLRSKWGP--LKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI------ 729 (1226)
T ss_pred cHHHHHHhccCC--CccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccC------
Confidence 999999876642 1127888889999999999999999999999999999996 5789999999999876421
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC--CCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS--IKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~--~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
.+.+..+.||..|||||++.. ..|+.++|||||||++.||.||++||.
T Consensus 730 ------------------------------nP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ 779 (1226)
T KOG4279|consen 730 ------------------------------NPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFV 779 (1226)
T ss_pred ------------------------------CccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCee
Confidence 122345669999999999975 458999999999999999999999996
Q ss_pred ccccCCCCcchhchhHHHHHHHH-hhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 714 DELGQGNGLLVEDKNRAIRLADA-AIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
.-... ...++.- ..+...+.+++...+...+|.+|+.+||.+||+++++++.
T Consensus 780 Elgsp-----------qAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 780 ELGSP-----------QAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred ecCCh-----------hHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence 53111 1222221 2223345566688899999999999999999999999874
No 65
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2e-38 Score=341.10 Aligned_cols=239 Identities=24% Similarity=0.251 Sum_probs=189.4
Q ss_pred eccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEeccCCC
Q 003847 482 ILGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
+||+|+||.||+|+. .+++.||||+++... ....+.+..|..++..+ +||||+++++++...+..++||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg 81 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 699999999999995 468899999997532 22334556677777654 8999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++.... .+++..+..++.|++.||+|||+.+|+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~L~~~~~~~~-----~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~----- 151 (316)
T cd05592 82 DLMFHIQSSG-----RFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEG----- 151 (316)
T ss_pred cHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCC-----
Confidence 9999887543 389999999999999999999999999999999999999999999999999875422110
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 152 -------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~ 200 (316)
T cd05592 152 -------------------------------KASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGED 200 (316)
T ss_pred -------------------------------ccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCC
Confidence 1123458999999999999899999999999999999999999996532
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHH-HHH
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMK-EAL 774 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl 774 (791)
. .++...........+......+.+++.+||+.||++||++. +++
T Consensus 201 ~-------------~~~~~~i~~~~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 201 E-------------DELFDSILNDRPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred H-------------HHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 1 11111111111111122455678999999999999999876 443
No 66
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=8.1e-38 Score=327.53 Aligned_cols=251 Identities=28% Similarity=0.384 Sum_probs=201.4
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
....||+|+||.||+|.. ++++.||+|++..... ..+++.+|++++++++|+||+++++++...+..++||||+++++
T Consensus 10 ~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 88 (263)
T cd05052 10 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGN 88 (263)
T ss_pred EeeecCCcccceEEEEEEecCCceEEEEEecCCch-HHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCc
Confidence 346899999999999995 4589999999876533 35678999999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++..... ..+++..++.++.|+++||+|||+.|++||||||+||++++++.+||+|||++..........
T Consensus 89 L~~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~---- 161 (263)
T cd05052 89 LLDYLRECNR---QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA---- 161 (263)
T ss_pred HHHHHHhCCC---CCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceeec----
Confidence 9999876432 238999999999999999999999999999999999999999999999999987654321100
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDEL 716 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~ 716 (791)
.....++..|+|||.+.+..++.++|||||||++|||++ |..||....
T Consensus 162 -------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~ 210 (263)
T cd05052 162 -------------------------------HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 210 (263)
T ss_pred -------------------------------cCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC
Confidence 001124567999999998899999999999999999998 888885431
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
.. ............ ......+..+.+++.+||+.||++||++.+++++|+.+
T Consensus 211 ~~----------~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 211 LS----------QVYELLEKGYRM--ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred HH----------HHHHHHHCCCCC--CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 11 111111111111 11222456789999999999999999999999999875
No 67
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=2.5e-38 Score=342.31 Aligned_cols=245 Identities=19% Similarity=0.241 Sum_probs=191.7
Q ss_pred eeccccCceEEEEEEe-CCCcEEEEEEcCCC---chhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEeccCC
Q 003847 481 YILGASGSSIMYKAVL-EDGTALAVRRIGEN---SVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
++||+|+||.||+|+. .+++.||+|+++.. .....+.+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 3699999999999995 46899999999753 233345678899888877 899999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|+|..++.... .+++..++.++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~~L~~~~~~~~-----~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~---- 151 (329)
T cd05618 81 GDLMFHMQRQR-----KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---- 151 (329)
T ss_pred CCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCC----
Confidence 99988876543 389999999999999999999999999999999999999999999999999874321110
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 152 --------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~ 199 (329)
T cd05618 152 --------------------------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 199 (329)
T ss_pred --------------------------------ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccC
Confidence 112345899999999999999999999999999999999999999532
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSM 770 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 770 (791)
........ .. ...+...........+......+.+++.+||+.||++||++
T Consensus 200 ~~~~~~~~-~~---~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 200 GSSDNPDQ-NT---EDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred CCcCCccc-cc---HHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 11111000 00 01111112222222223355678899999999999999984
No 68
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.1e-37 Score=324.19 Aligned_cols=249 Identities=24% Similarity=0.339 Sum_probs=197.4
Q ss_pred eeccccCceEEEEEEe-CCCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 481 YILGASGSSIMYKAVL-EDGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
+.||+|+||.||+|+. .+++.||+|.+.... .+....+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 3689999999999995 478999999986543 33456789999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++..... .+++.+++.++.|++.||+|||+.||+||||||+||+++.++.+||+|||++...........
T Consensus 81 ~~~~~~~~~----~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~---- 152 (252)
T cd05084 81 LTFLRTEGP----RLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYAST---- 152 (252)
T ss_pred HHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCccccccccccc----
Confidence 999865432 389999999999999999999999999999999999999999999999999875432110000
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhcccc
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDELG 717 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~ 717 (791)
.....++..|+|||.+.+..++.++||||||+++|||++ |..||.....
T Consensus 153 ------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~ 202 (252)
T cd05084 153 ------------------------------GGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN 202 (252)
T ss_pred ------------------------------CCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH
Confidence 000113456999999998889999999999999999998 7778854211
Q ss_pred CCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhcc
Q 003847 718 QGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779 (791)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 779 (791)
............. ......+..+.+++.+|++.+|++||++.+++++|++
T Consensus 203 ----------~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 203 ----------QQTREAIEQGVRL--PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred ----------HHHHHHHHcCCCC--CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 1111111111111 1122245678999999999999999999999999863
No 69
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2.4e-38 Score=343.42 Aligned_cols=247 Identities=19% Similarity=0.226 Sum_probs=197.8
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
...||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++...+..|+||||+++
T Consensus 6 ~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g 85 (333)
T cd05600 6 LTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPG 85 (333)
T ss_pred EEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCC
Confidence 468999999999999964 58999999997542 23346788999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|+|.+++.... .+++..++.++.|++.||+|||+.||+||||||+|||++.++.+||+|||++......
T Consensus 86 ~~L~~~l~~~~-----~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~------ 154 (333)
T cd05600 86 GDFRTLLNNLG-----VLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTY------ 154 (333)
T ss_pred CCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCcccccc------
Confidence 99999987543 3899999999999999999999999999999999999999999999999998764320
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 155 ---------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~ 201 (333)
T cd05600 155 ---------------------------------ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGS 201 (333)
T ss_pred ---------------------------------cCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCC
Confidence 11335899999999999989999999999999999999999999653
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCcc-chHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFE-GKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
...... ................ ........+.+++.+||..+|++||+++++++.
T Consensus 202 ~~~~~~------~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 202 TPNETW------ENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred CHHHHH------HHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 211000 0000000000000000 001235678899999999999999999999965
No 70
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2.7e-38 Score=342.19 Aligned_cols=249 Identities=20% Similarity=0.238 Sum_probs=194.8
Q ss_pred eccccCceEEEEEEe-CCCcEEEEEEcCCC---chhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEeccCCC
Q 003847 482 ILGASGSSIMYKAVL-EDGTALAVRRIGEN---SVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
+||+|+||.||+++. .+++.||||+++.. .....+.+..|..+++++ +||||+++++++...+..|+||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g 81 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGG 81 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 689999999999995 46899999999754 223345688899999988 7999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++.... .+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~L~~~~~~~~-----~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~------ 150 (329)
T cd05588 82 DLMFHMQRQR-----KLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG------ 150 (329)
T ss_pred CHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCC------
Confidence 9998876543 39999999999999999999999999999999999999999999999999987421110
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 151 ------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~ 200 (329)
T cd05588 151 ------------------------------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG 200 (329)
T ss_pred ------------------------------CccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccccc
Confidence 01123468999999999999999999999999999999999999996421
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCC------HHHHHH
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPS------MKEALQ 775 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs------~~evl~ 775 (791)
......... ...............+......+.+++.+||+.||.+||+ ++++++
T Consensus 201 ~~~~~~~~~----~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 201 MSDNPDQNT----EDYLFQVILEKQIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred ccccccccc----hHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 111000000 0111111122222222234567889999999999999997 567764
No 71
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=9.7e-38 Score=325.52 Aligned_cols=247 Identities=27% Similarity=0.427 Sum_probs=197.7
Q ss_pred ceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCChh
Q 003847 480 AYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLA 559 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 559 (791)
...||+|+||.||++..+++..+|+|.+..... ..+++.+|++++++++||||+++++++...+..++||||+++|+|.
T Consensus 9 ~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~ 87 (256)
T cd05114 9 MKELGSGQFGVVHLGKWRAQIKVAIKAINEGAM-SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLL 87 (256)
T ss_pred eeEecCCcCceEEEEEeccCceEEEEecccCCc-cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHH
Confidence 357999999999999988888999999875433 2467889999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCCc
Q 003847 560 NARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639 (791)
Q Consensus 560 ~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~ 639 (791)
+++..... .+++..++.++.|++.||+|||+.||+||||||+||+++.++.+||+|||.++.........
T Consensus 88 ~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~------ 157 (256)
T cd05114 88 NYLRQRQG----KLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTS------ 157 (256)
T ss_pred HHHHhCcc----CCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCceec------
Confidence 98875432 38999999999999999999999999999999999999999999999999987653211100
Q ss_pred cccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhccccC
Q 003847 640 RNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDELGQ 718 (791)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~ 718 (791)
.....++..|+|||++.+..++.++||||||+++|||++ |+.||......
T Consensus 158 -----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~ 208 (256)
T cd05114 158 -----------------------------SSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY 208 (256)
T ss_pred -----------------------------cCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 011125567999999998889999999999999999999 88898543210
Q ss_pred CCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhc
Q 003847 719 GNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALE 778 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 778 (791)
.....+... .. ...+......+.+++.+||+.+|++||+++|+++.|.
T Consensus 209 ---------~~~~~i~~~-~~--~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 209 ---------EVVEMISRG-FR--LYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred ---------HHHHHHHCC-CC--CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 011111110 00 0111123457899999999999999999999999873
No 72
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=6.3e-39 Score=345.68 Aligned_cols=238 Identities=20% Similarity=0.261 Sum_probs=192.7
Q ss_pred eeccccCceEEEEEEe----CCCcEEEEEEcCCCch--hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccC
Q 003847 481 YILGASGSSIMYKAVL----EDGTALAVRRIGENSV--DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~----~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
+.||+|+||.||+++. .+|+.||+|++..... .....+.+|++++++++||||+++++++...+..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 4699999999999874 4689999999975422 233467789999999999999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
+|+|.+++.... .+++..++.++.||+.||+|||+.||+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~L~~~l~~~~-----~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~--- 153 (318)
T cd05582 82 GGDLFTRLSKEV-----MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK--- 153 (318)
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC---
Confidence 999999886543 389999999999999999999999999999999999999999999999999875432110
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 154 ---------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 200 (318)
T cd05582 154 ---------------------------------KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQG 200 (318)
T ss_pred ---------------------------------ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCC
Confidence 11134589999999999988899999999999999999999999964
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKE 772 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 772 (791)
... .+............+......+.+++.+||+.||++||++.+
T Consensus 201 ~~~-------------~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 201 KDR-------------KETMTMILKAKLGMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCH-------------HHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 311 111111222222222234567889999999999999999544
No 73
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1e-37 Score=326.25 Aligned_cols=250 Identities=21% Similarity=0.349 Sum_probs=201.7
Q ss_pred ceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCChh
Q 003847 480 AYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLA 559 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 559 (791)
.+.||+|++|.||+|...+++.||+|.+..... ..+.+.+|+.++++++|+||+++++++...+..+++|||+++++|.
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 89 (261)
T cd05072 11 VKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLL 89 (261)
T ss_pred eeecCCcCCceEEEEEecCCceEEEEEccCCch-hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcHH
Confidence 468999999999999988889999999876433 3468899999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCCc
Q 003847 560 NARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639 (791)
Q Consensus 560 ~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~ 639 (791)
+++...... .+++..+..++.|++.||+|||+.+++||||||+||+++.++.+||+|||++..........
T Consensus 90 ~~l~~~~~~---~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~------ 160 (261)
T cd05072 90 DFLKSDEGG---KVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTA------ 160 (261)
T ss_pred HHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCceec------
Confidence 998765322 38899999999999999999999999999999999999999999999999998754221100
Q ss_pred cccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhccccC
Q 003847 640 RNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDELGQ 718 (791)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~ 718 (791)
.....++..|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 161 -----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~ 211 (261)
T cd05072 161 -----------------------------REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS 211 (261)
T ss_pred -----------------------------cCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH
Confidence 011225667999999988889999999999999999998 88898543111
Q ss_pred CCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 719 GNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
. ......... ..+.....+..+.+++.+|++.+|++||+++++.+.|+++
T Consensus 212 ---------~-~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 212 ---------D-VMSALQRGY--RMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred ---------H-HHHHHHcCC--CCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 0 111111111 1111122456788999999999999999999999999864
No 74
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.2e-37 Score=329.88 Aligned_cols=255 Identities=25% Similarity=0.377 Sum_probs=201.9
Q ss_pred ceeccccCceEEEEEEeCC------CcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEec
Q 003847 480 AYILGASGSSIMYKAVLED------GTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDF 552 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~------g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 552 (791)
.+.||+|+||.||+|.... ...||+|.+.... ......+.+|++++++++||||+++++++...+..+++|||
T Consensus 10 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~ 89 (283)
T cd05048 10 LEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEY 89 (283)
T ss_pred hhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEEEec
Confidence 4579999999999998532 2689999997543 33456789999999999999999999999999999999999
Q ss_pred cCCCChhHHHHhhcCCC-----------CCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccC
Q 003847 553 VPNGSLANARYRKMGSS-----------PCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFG 621 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~-----------~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFG 621 (791)
+++++|.+++....... ...+++.+++.++.|++.||+|||+.+++||||||+||++++++.+||+|||
T Consensus 90 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg 169 (283)
T cd05048 90 LAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFG 169 (283)
T ss_pred CCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCc
Confidence 99999999987643211 1348899999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHH
Q 003847 622 LERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVI 701 (791)
Q Consensus 622 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvi 701 (791)
+++......... ......+++.|+|||.+.+..++.++|||||||+
T Consensus 170 ~~~~~~~~~~~~----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~i 215 (283)
T cd05048 170 LSRDIYSADYYR----------------------------------VQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVV 215 (283)
T ss_pred ceeecccccccc----------------------------------ccCCCcccccccCHHHhccCcCchhhhHHHHHHH
Confidence 987653221100 0112236788999999988899999999999999
Q ss_pred HHHHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 702 LLELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 702 l~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
+|||++ |..||.+.... .....+...... ......+.++.+|+.+||+.||++||++.||++.|+++
T Consensus 216 l~el~~~g~~p~~~~~~~----------~~~~~i~~~~~~--~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 216 LWEIFSYGLQPYYGFSNQ----------EVIEMIRSRQLL--PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred HHHHHcCCCCCCCCCCHH----------HHHHHHHcCCcC--CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 999998 99898653211 111111111111 11233567899999999999999999999999999864
No 75
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=3e-38 Score=341.22 Aligned_cols=241 Identities=21% Similarity=0.262 Sum_probs=191.3
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHHHH---hccCCCCccceeeEEEccCceEEEEec
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVRVI---AKLVHPNLVRIRGFYWGVDEKLIIYDF 552 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~H~nIv~l~~~~~~~~~~~lv~e~ 552 (791)
...||+|+||.||+|.. .+++.||||+++... ....+.+.+|++++ ++++||||+++++++...+..|+||||
T Consensus 4 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~ 83 (324)
T cd05589 4 LAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEY 83 (324)
T ss_pred EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcC
Confidence 45899999999999984 468999999997532 22345566676655 567899999999999999999999999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCC
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 632 (791)
+++++|..++... .+++..+..++.||+.||+|||+.||+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~~~~~L~~~~~~~------~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~-- 155 (324)
T cd05589 84 AAGGDLMMHIHTD------VFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFG-- 155 (324)
T ss_pred CCCCcHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCC--
Confidence 9999998877542 38999999999999999999999999999999999999999999999999986432111
Q ss_pred CcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcch
Q 003847 633 SKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIV 712 (791)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf 712 (791)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 156 ----------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf 201 (324)
T cd05589 156 ----------------------------------DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPF 201 (324)
T ss_pred ----------------------------------CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCC
Confidence 0112346899999999999989999999999999999999999999
Q ss_pred hccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 003847 713 VDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRP-----SMKEALQ 775 (791)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 775 (791)
..... .+..+.........+......+.+++.+||+.||++|| ++.++++
T Consensus 202 ~~~~~-------------~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 202 PGDDE-------------EEVFDSIVNDEVRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred CCCCH-------------HHHHHHHHhCCCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 65311 11112222222222222456788999999999999999 5667665
No 76
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.4e-37 Score=325.35 Aligned_cols=251 Identities=24% Similarity=0.368 Sum_probs=202.5
Q ss_pred cceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 479 SAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
..+.||+|++|.||+|...+++.||||.++.... ..+++.+|++++++++|+||+++++++...+..++||||+++++|
T Consensus 10 ~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 88 (261)
T cd05068 10 LLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM-DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSL 88 (261)
T ss_pred eEEEecccCCccEEEEEecCCeEEEEEeeCCCcc-cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcH
Confidence 3478999999999999987788999999976543 346789999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++..... ..+++..+..++.|++.||.|||+.||+||||||+||+++.++.+||+|||+++.........
T Consensus 89 ~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~----- 160 (261)
T cd05068 89 LEYLQGGAG---RALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEA----- 160 (261)
T ss_pred HHHHhccCC---CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccc-----
Confidence 999876542 248999999999999999999999999999999999999999999999999998765221100
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhcccc
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDELG 717 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~ 717 (791)
.....++..|+|||++.+..++.++||||||+++|||++ |+.||.....
T Consensus 161 ------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~ 210 (261)
T cd05068 161 ------------------------------REGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN 210 (261)
T ss_pred ------------------------------cCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH
Confidence 001113456999999998899999999999999999999 8888854311
Q ss_pred CCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 718 QGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
.......+.... .+.....+..+.+++.+|++.+|++||+++++++.|+++
T Consensus 211 ----------~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 211 ----------AEVLQQVDQGYR--MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred ----------HHHHHHHHcCCC--CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 011111111111 111223457789999999999999999999999999864
No 77
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.6e-38 Score=343.16 Aligned_cols=236 Identities=22% Similarity=0.285 Sum_probs=188.7
Q ss_pred eccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHH-HHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 482 ILGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVR-VIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
+||+|+||+||+|+. .+|+.||||++.... ....+.+..|.. +++.++||||+++++++...+..++||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g 81 (323)
T cd05575 2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGG 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCC
Confidence 689999999999995 478999999996532 122234445544 567899999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++.... .+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~------ 150 (323)
T cd05575 82 ELFFHLQRER-----SFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS------ 150 (323)
T ss_pred CHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCC------
Confidence 9999887543 38999999999999999999999999999999999999999999999999986432111
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 151 ------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~ 200 (323)
T cd05575 151 ------------------------------KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD 200 (323)
T ss_pred ------------------------------CccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCC
Confidence 01123458999999999999999999999999999999999999996531
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHH
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMK 771 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 771 (791)
..++.+................+.+++.+||+.||++||++.
T Consensus 201 -------------~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 201 -------------TAEMYDNILNKPLRLKPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred -------------HHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 111222222222222222456788999999999999999985
No 78
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=3.2e-38 Score=340.00 Aligned_cols=241 Identities=24% Similarity=0.270 Sum_probs=194.5
Q ss_pred eccccCceEEEEEEeC-CCcEEEEEEcCCCc---hhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEeccCCC
Q 003847 482 ILGASGSSIMYKAVLE-DGTALAVRRIGENS---VDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
+||+|+||.||+|+.. +++.||||+++... ......+..|.++++.+ +||||+++++++...+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGG 81 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 6999999999999954 58899999997542 23345677888999888 7999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++.... .+++..+..++.|++.||+|||+.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~L~~~~~~~~-----~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~----- 151 (318)
T cd05570 82 DLMFHIQRSG-----RFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV----- 151 (318)
T ss_pred CHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCC-----
Confidence 9998876653 389999999999999999999999999999999999999999999999999864221110
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 152 -------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~ 200 (318)
T cd05570 152 -------------------------------TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD 200 (318)
T ss_pred -------------------------------cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC
Confidence 1112358999999999999999999999999999999999999996432
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCH-----HHHHHH
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSM-----KEALQA 776 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~~ 776 (791)
. ..+...........+......+.+++.+||..||++||++ .++++.
T Consensus 201 ~-------------~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 201 E-------------DELFQSILEDEVRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred H-------------HHHHHHHHcCCCCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 1 1111111111222222245678899999999999999999 887653
No 79
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-38 Score=321.78 Aligned_cols=257 Identities=21% Similarity=0.274 Sum_probs=197.2
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCC--CchhhHHHHHHHHHHHhccCCCCccceeeEEEc-----cCceEEEEe
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGE--NSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG-----VDEKLIIYD 551 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-----~~~~~lv~e 551 (791)
-+.||+|+||.|+.+. .++|+.||||++.. ......++..+|+++|+.++|+||+.+++++.. -+..|+|+|
T Consensus 27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~e 106 (359)
T KOG0660|consen 27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFE 106 (359)
T ss_pred cccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehh
Confidence 3579999999999999 56799999999973 455556788899999999999999999999876 346899999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTS 631 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 631 (791)
+| +.+|.+.++.... ++...+..++.|+++||+|+|+.+|+||||||+|++++.+..+||+|||+|+..... .
T Consensus 107 lM-etDL~~iik~~~~-----L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~-~ 179 (359)
T KOG0660|consen 107 LM-ETDLHQIIKSQQD-----LTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKF-F 179 (359)
T ss_pred HH-hhHHHHHHHcCcc-----ccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeecccc-C
Confidence 99 6799998887642 899999999999999999999999999999999999999999999999999987543 0
Q ss_pred CCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc-CCCCCCchhhHHHHHHHHHHHhCCc
Q 003847 632 SSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR-SIKPNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~-~~~~~~~sDvwSlGvil~elltG~~ 710 (791)
.....+.++.|.-|+|||++. ...|+.+.||||+|||+.||++|++
T Consensus 180 ---------------------------------~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkp 226 (359)
T KOG0660|consen 180 ---------------------------------EDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKP 226 (359)
T ss_pred ---------------------------------cccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCC
Confidence 011234566788899999985 4789999999999999999999999
Q ss_pred chhccccCCCCcch------hchhHHHHHH----HHhhhc-----Cccc---hHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 003847 711 IVVDELGQGNGLLV------EDKNRAIRLA----DAAIRA-----DFEG---KEEALLSCFKLGYSCASPLPQKRPSMKE 772 (791)
Q Consensus 711 pf~~~~~~~~~~~~------~~~~~~~~~~----~~~~~~-----~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~e 772 (791)
.|.+...-.....+ ........+. ...+.. ..+. ........++|+.+||..||.+|+|++|
T Consensus 227 lFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~e 306 (359)
T KOG0660|consen 227 LFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEE 306 (359)
T ss_pred CCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHH
Confidence 88653220000000 0000011110 001110 0000 0112356789999999999999999999
Q ss_pred HHHH
Q 003847 773 ALQA 776 (791)
Q Consensus 773 vl~~ 776 (791)
+++.
T Consensus 307 AL~h 310 (359)
T KOG0660|consen 307 ALAH 310 (359)
T ss_pred HhcC
Confidence 9864
No 80
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-39 Score=344.94 Aligned_cols=265 Identities=25% Similarity=0.336 Sum_probs=208.0
Q ss_pred CcccchHHHhhhcceeccccCceEEEEEEeCC--C---cEEEEEEcCC---CchhhHHHHHHHHHHHhccCCCCccceee
Q 003847 467 DKELELETLLKASAYILGASGSSIMYKAVLED--G---TALAVRRIGE---NSVDRFRDFETQVRVIAKLVHPNLVRIRG 538 (791)
Q Consensus 467 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~--g---~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~H~nIv~l~~ 538 (791)
..++..+++... ..||+|+||.||+|++.. + ..||||..+. ......++|.+|+++|++++|||||++||
T Consensus 151 ~Wel~H~~v~l~--kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yG 228 (474)
T KOG0194|consen 151 KWELSHSDIELG--KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYG 228 (474)
T ss_pred ccEEeccCcccc--ceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 344445554443 799999999999999543 2 2389999985 34566789999999999999999999999
Q ss_pred EEEccCceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEe
Q 003847 539 FYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIG 618 (791)
Q Consensus 539 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~ 618 (791)
++..+...++|||+|.||+|.+++..... .++..++..++.+.|.||+|||+++++||||-.+|+|++.++.+||+
T Consensus 229 Va~~~~Pl~ivmEl~~gGsL~~~L~k~~~----~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKIS 304 (474)
T KOG0194|consen 229 VAVLEEPLMLVMELCNGGSLDDYLKKNKK----SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKIS 304 (474)
T ss_pred EEcCCCccEEEEEecCCCcHHHHHHhCCC----CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeC
Confidence 99999999999999999999999998764 38999999999999999999999999999999999999999999999
Q ss_pred ccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHH
Q 003847 619 DFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSF 698 (791)
Q Consensus 619 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSl 698 (791)
|||+++.-........ ...-...|+|||.+....|++++|||||
T Consensus 305 DFGLs~~~~~~~~~~~------------------------------------~~klPirWLAPEtl~~~~~s~kTDV~sf 348 (474)
T KOG0194|consen 305 DFGLSRAGSQYVMKKF------------------------------------LKKLPIRWLAPETLNTGIFSFKTDVWSF 348 (474)
T ss_pred ccccccCCcceeeccc------------------------------------cccCcceecChhhhccCccccccchhhe
Confidence 9999875431110000 0002245999999999999999999999
Q ss_pred HHHHHHHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHh
Q 003847 699 GVILLELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQAL 777 (791)
Q Consensus 699 Gvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 777 (791)
||++||+++ |..||.+.... .....+.....+-.. +...+..+..++.+||..+|++||+|.++.+.|
T Consensus 349 GV~~~Eif~~g~~Py~g~~~~---------~v~~kI~~~~~r~~~--~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l 417 (474)
T KOG0194|consen 349 GVLLWEIFENGAEPYPGMKNY---------EVKAKIVKNGYRMPI--PSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKL 417 (474)
T ss_pred eeeEEeeeccCCCCCCCCCHH---------HHHHHHHhcCccCCC--CCCCHHHHHHHHHHhccCChhhccCHHHHHHHH
Confidence 999999999 77788653211 111111111111111 223556777888899999999999999999999
Q ss_pred ccCCCCC
Q 003847 778 EKIPSSP 784 (791)
Q Consensus 778 ~~i~~~~ 784 (791)
+.+....
T Consensus 418 ~~~~~~~ 424 (474)
T KOG0194|consen 418 EALEKKK 424 (474)
T ss_pred HHHHhcc
Confidence 8875443
No 81
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.1e-37 Score=326.04 Aligned_cols=251 Identities=26% Similarity=0.398 Sum_probs=205.8
Q ss_pred cceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 479 SAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
..+.||.|+||.||+|...+++.+|+|.+..........+..|+++++.++|+||+++++++...+..++||||+++++|
T Consensus 10 ~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 89 (261)
T cd05148 10 LERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSL 89 (261)
T ss_pred HhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccCCH
Confidence 35689999999999999888999999999877665567899999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++...... .+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||.+.........
T Consensus 90 ~~~~~~~~~~---~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~------ 160 (261)
T cd05148 90 LAFLRSPEGQ---VLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYL------ 160 (261)
T ss_pred HHHHhcCCCC---CCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCcccc------
Confidence 9998764332 4899999999999999999999999999999999999999999999999999765422110
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhcccc
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDELG 717 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~ 717 (791)
.....++..|+|||.+.+..++.++||||||+++|+|++ |+.||.....
T Consensus 161 ------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~ 210 (261)
T cd05148 161 ------------------------------SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN 210 (261)
T ss_pred ------------------------------ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH
Confidence 001225677999999988889999999999999999998 7888854321
Q ss_pred CCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 718 QGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
. ............ +.....+..+.+++.+||+.||++|||++++++.|+.+
T Consensus 211 ---------~-~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 211 ---------H-EVYDQITAGYRM--PCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred ---------H-HHHHHHHhCCcC--CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 1 111111111111 11223557788999999999999999999999999864
No 82
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.2e-37 Score=331.36 Aligned_cols=259 Identities=24% Similarity=0.358 Sum_probs=206.7
Q ss_pred ceeccccCceEEEEEEe------CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEecc
Q 003847 480 AYILGASGSSIMYKAVL------EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
...||+|+||.||+++. .++..+++|.+........+.+.+|++++++++|+||+++++++...+..++||||+
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 89 (291)
T cd05094 10 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYM 89 (291)
T ss_pred eeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEecC
Confidence 46899999999999973 245679999998776666678999999999999999999999999999999999999
Q ss_pred CCCChhHHHHhhcCC-----------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCc
Q 003847 554 PNGSLANARYRKMGS-----------SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGL 622 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGl 622 (791)
++++|.+++...... ....+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||+
T Consensus 90 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~ 169 (291)
T cd05094 90 KHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGM 169 (291)
T ss_pred CCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEECCCCc
Confidence 999999998764321 112489999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHH
Q 003847 623 ERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVIL 702 (791)
Q Consensus 623 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil 702 (791)
++......... ......|+..|+|||++.+..++.++|||||||++
T Consensus 170 a~~~~~~~~~~----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 215 (291)
T cd05094 170 SRDVYSTDYYR----------------------------------VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVIL 215 (291)
T ss_pred ccccCCCceee----------------------------------cCCCCCcceeecChHHhccCCCCchhhHHHHHHHH
Confidence 87654221100 01123367889999999998999999999999999
Q ss_pred HHHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCc-cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 703 LELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADF-EGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 703 ~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
|||+| |+.||...... +..+....+.. ......+..+.+++.+||+.||++||++++|+++|+++
T Consensus 216 ~el~t~g~~p~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~ 282 (291)
T cd05094 216 WEIFTYGKQPWFQLSNT-------------EVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHAL 282 (291)
T ss_pred HHHHhCCCCCCCCCCHH-------------HHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 99999 99898543211 11111111111 11122456788999999999999999999999999999
Q ss_pred CCCCC
Q 003847 781 PSSPS 785 (791)
Q Consensus 781 ~~~~~ 785 (791)
....+
T Consensus 283 ~~~~~ 287 (291)
T cd05094 283 GKATP 287 (291)
T ss_pred HhhcC
Confidence 66443
No 83
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-38 Score=338.57 Aligned_cols=244 Identities=24% Similarity=0.329 Sum_probs=203.9
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCchh---hHHHHHHHHHHHhccC-CCCccceeeEEEccCceEEEEeccC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENSVD---RFRDFETQVRVIAKLV-HPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
...||+|.||.||+++.+ +|+.+|+|.+.+.... ..+.+.+|+.+|+++. |||||.+++.|++....++|||++.
T Consensus 40 ~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~ 119 (382)
T KOG0032|consen 40 GRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCE 119 (382)
T ss_pred hhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecC
Confidence 368999999999999954 5999999999775332 3468999999999998 9999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCC----CCeEEeccCcccccCCCC
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGND----MEPKIGDFGLERLVTGDT 630 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~----~~~kL~DFGla~~~~~~~ 630 (791)
||.|.+.+... .+++.++..++.|++.|++|||+.||+||||||+|+|+... +.+|++|||++.......
T Consensus 120 GGeLfd~i~~~------~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~ 193 (382)
T KOG0032|consen 120 GGELFDRIVKK------HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGE 193 (382)
T ss_pred CchHHHHHHHc------cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCc
Confidence 99999998876 18999999999999999999999999999999999999633 579999999999876411
Q ss_pred CCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCc
Q 003847 631 SSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~ 710 (791)
.....+||+.|+|||++.+..|+..+||||+||++|.|++|..
T Consensus 194 -------------------------------------~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~ 236 (382)
T KOG0032|consen 194 -------------------------------------RLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVP 236 (382)
T ss_pred -------------------------------------eEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCC
Confidence 1235679999999999999999999999999999999999999
Q ss_pred chhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 711 IVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 711 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
||.+...... ...+......-..+........+.+++..|+..||.+|+|+.++++
T Consensus 237 PF~~~~~~~~---------~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 237 PFWGETEFEI---------FLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred CCcCCChhHH---------HHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 9977532111 1122221111122233445678899999999999999999999998
No 84
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=4.5e-38 Score=338.30 Aligned_cols=240 Identities=23% Similarity=0.248 Sum_probs=190.5
Q ss_pred eccccCceEEEEEEeC-CCcEEEEEEcCCCc---hhhHHHHHHHHHHHhc-cCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 482 ILGASGSSIMYKAVLE-DGTALAVRRIGENS---VDRFRDFETQVRVIAK-LVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~-l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
.||+|+||.||+|+.. +++.||||+++... ....+.+..|..++.. ++||||+++++++.+.+..++||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g 81 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCC
Confidence 6899999999999954 57899999997542 2234556677888876 48999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++.... .+++.++..++.|++.||+|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~L~~~l~~~~-----~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~----- 151 (316)
T cd05619 82 DLMFHIQSCH-----KFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA----- 151 (316)
T ss_pred cHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC-----
Confidence 9999887543 388999999999999999999999999999999999999999999999999874321110
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 152 -------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~ 200 (316)
T cd05619 152 -------------------------------KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHD 200 (316)
T ss_pred -------------------------------ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCC
Confidence 1113458999999999999899999999999999999999999996531
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHH-HHHH
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMK-EALQ 775 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl~ 775 (791)
. .+............+......+.+++.+||+.||++||++. ++++
T Consensus 201 ~-------------~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 201 E-------------EELFQSIRMDNPCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred H-------------HHHHHHHHhCCCCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 1 01111111111111122445678999999999999999997 5543
No 85
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-38 Score=311.26 Aligned_cols=273 Identities=21% Similarity=0.280 Sum_probs=222.6
Q ss_pred cccchHHHhhhcceeccccCceEEEEEE-eCCCcEEEEEEcCCCchhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCc
Q 003847 468 KELELETLLKASAYILGASGSSIMYKAV-LEDGTALAVRRIGENSVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDE 545 (791)
Q Consensus 468 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 545 (791)
..-.++++.+-+.++||+|+|+.|-.++ ..+|..+|||++.+.......++.+|++++.+. .|+||++++++|+++..
T Consensus 71 ~~g~F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~ 150 (463)
T KOG0607|consen 71 LSGKFEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTR 150 (463)
T ss_pred ccchHHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccce
Confidence 3456788899999999999999999998 789999999999887666667889999999998 49999999999999999
Q ss_pred eEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCC---eEEeccCc
Q 003847 546 KLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDME---PKIGDFGL 622 (791)
Q Consensus 546 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~---~kL~DFGl 622 (791)
.|+|||-|.||.|...|+++. .+++.++.++.++|+.||+|||.+||.|||+||+|||...... +||+||.+
T Consensus 151 FYLVfEKm~GGplLshI~~~~-----~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDL 225 (463)
T KOG0607|consen 151 FYLVFEKMRGGPLLSHIQKRK-----HFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDL 225 (463)
T ss_pred EEEEEecccCchHHHHHHHhh-----hccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeecccc
Confidence 999999999999999998876 3999999999999999999999999999999999999976544 79999998
Q ss_pred ccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc-----CCCCCCchhhHH
Q 003847 623 ERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR-----SIKPNPKWDVYS 697 (791)
Q Consensus 623 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~-----~~~~~~~sDvwS 697 (791)
..-+.....-. +...+.....+|+..|||||+.. ...|+.++|.||
T Consensus 226 gSg~k~~~~~s-----------------------------pastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwS 276 (463)
T KOG0607|consen 226 GSGIKLNNDCS-----------------------------PASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWS 276 (463)
T ss_pred ccccccCCCCC-----------------------------CCCCccccCcccchhhcchhHHhhhccccccccccccHHH
Confidence 76543222111 11223455678999999999873 356899999999
Q ss_pred HHHHHHHHHhCCcchhcccc---CCCCcchhchhHHHHHHHHhhhcCccchHHH----HHHHHHHHhhccCCCCCCCCCH
Q 003847 698 FGVILLELLTGKVIVVDELG---QGNGLLVEDKNRAIRLADAAIRADFEGKEEA----LLSCFKLGYSCASPLPQKRPSM 770 (791)
Q Consensus 698 lGvil~elltG~~pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~li~~cl~~dP~~RPs~ 770 (791)
||||+|-|++|.+||.+..+ .|.+-..-.. -...++..+..+.++.++++ +.+..+++..++..|+.+|.++
T Consensus 277 LGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~-CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa 355 (463)
T KOG0607|consen 277 LGVILYIMLSGYPPFVGHCGADCGWDRGEVCRV-CQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSA 355 (463)
T ss_pred HHHHHHHHHhCCCCccCccCCcCCccCCCccHH-HHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhh
Confidence 99999999999999977554 2333222111 12455666666777665443 4567889999999999999999
Q ss_pred HHHHH
Q 003847 771 KEALQ 775 (791)
Q Consensus 771 ~evl~ 775 (791)
.+++.
T Consensus 356 ~~vln 360 (463)
T KOG0607|consen 356 AQVLN 360 (463)
T ss_pred hhccC
Confidence 99887
No 86
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.1e-37 Score=331.19 Aligned_cols=254 Identities=19% Similarity=0.220 Sum_probs=191.0
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCch-hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSV-DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
.+.||+|+||.||+|+. .+++.||+|+++.... .....+.+|++++++++||||+++++++...+..++||||++ ++
T Consensus 10 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~ 88 (288)
T cd07871 10 LDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLD-SD 88 (288)
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCC-cC
Confidence 46899999999999995 4689999999875422 223567889999999999999999999999999999999997 48
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++..... .+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 89 l~~~l~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~------ 158 (288)
T cd07871 89 LKQYLDNCGN----LMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK------ 158 (288)
T ss_pred HHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc------
Confidence 9888765432 378999999999999999999999999999999999999999999999999875432110
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
......|++.|+|||++.+ ..++.++||||+||++|||++|+.||....
T Consensus 159 ------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~ 208 (288)
T cd07871 159 ------------------------------TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGST 208 (288)
T ss_pred ------------------------------cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 0112347889999999865 568999999999999999999999996532
Q ss_pred cCCCCcch--------hchh----HHHHHHHHhhhcCc------cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 717 GQGNGLLV--------EDKN----RAIRLADAAIRADF------EGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 717 ~~~~~~~~--------~~~~----~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
.......+ .+.+ ...++.. ...... ........++.+++.+||..||.+|||++|+++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 209 VKEELHLIFRLLGTPTEETWPGITSNEEFRS-YLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred HHHHHHHHHHHhCCCChHHhhccccchhhhc-cccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 11000000 0000 0000000 000000 000012346789999999999999999999974
No 87
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1e-37 Score=344.42 Aligned_cols=260 Identities=23% Similarity=0.289 Sum_probs=201.7
Q ss_pred hcceeccccCceEEEEEEeC------CCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccC-CCCccceeeEEEccCceEEE
Q 003847 478 ASAYILGASGSSIMYKAVLE------DGTALAVRRIGENS-VDRFRDFETQVRVIAKLV-HPNLVRIRGFYWGVDEKLII 549 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv 549 (791)
...++||+|+||.||+|+.. .+..||||++.... ....+.+.+|+++++++. ||||+++++++.+.+..|+|
T Consensus 40 ~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv 119 (400)
T cd05105 40 VLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYII 119 (400)
T ss_pred ehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEE
Confidence 34568999999999999842 23579999997643 333467899999999996 99999999999999999999
Q ss_pred EeccCCCChhHHHHhhcCC-------------------------------------------------------------
Q 003847 550 YDFVPNGSLANARYRKMGS------------------------------------------------------------- 568 (791)
Q Consensus 550 ~e~~~~gsL~~~l~~~~~~------------------------------------------------------------- 568 (791)
||||++|+|.+++......
T Consensus 120 ~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (400)
T cd05105 120 TEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASK 199 (400)
T ss_pred EEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhh
Confidence 9999999999998754210
Q ss_pred ------------------------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEe
Q 003847 569 ------------------------------SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIG 618 (791)
Q Consensus 569 ------------------------------~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~ 618 (791)
....+++..+..++.|++.||+|||+.+|+||||||+|||++.++.+||+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~ 279 (400)
T cd05105 200 YSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKIC 279 (400)
T ss_pred hhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEE
Confidence 01247888999999999999999999999999999999999999999999
Q ss_pred ccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHH
Q 003847 619 DFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSF 698 (791)
Q Consensus 619 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSl 698 (791)
|||+++......... ......++..|+|||.+.+..++.++|||||
T Consensus 280 DfGla~~~~~~~~~~----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSl 325 (400)
T cd05105 280 DFGLARDIMHDSNYV----------------------------------SKGSTFLPVKWMAPESIFDNLYTTLSDVWSY 325 (400)
T ss_pred eCCcceecccccccc----------------------------------ccCCcCCCcceEChhhhcCCCCCchhhHHHH
Confidence 999988654221100 0112236778999999998899999999999
Q ss_pred HHHHHHHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHh
Q 003847 699 GVILLELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQAL 777 (791)
Q Consensus 699 Gvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 777 (791)
||++|||++ |..||...... . .......... ........+..+.+++.+||+.||++||++.+|.++|
T Consensus 326 Gvil~ellt~g~~P~~~~~~~--------~-~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l 394 (400)
T cd05105 326 GILLWEIFSLGGTPYPGMIVD--------S-TFYNKIKSGY--RMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIV 394 (400)
T ss_pred HHHHHHHHHCCCCCCcccchh--------H-HHHHHHhcCC--CCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHH
Confidence 999999997 88888543111 0 0111111111 1111223456789999999999999999999999999
Q ss_pred ccCCC
Q 003847 778 EKIPS 782 (791)
Q Consensus 778 ~~i~~ 782 (791)
+++..
T Consensus 395 ~~l~~ 399 (400)
T cd05105 395 ESLLP 399 (400)
T ss_pred HHHcC
Confidence 87643
No 88
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.5e-37 Score=328.52 Aligned_cols=253 Identities=25% Similarity=0.366 Sum_probs=201.8
Q ss_pred ceeccccCceEEEEEEeC------CCcEEEEEEcCCCchh-hHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEec
Q 003847 480 AYILGASGSSIMYKAVLE------DGTALAVRRIGENSVD-RFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDF 552 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 552 (791)
.+.||+|+||.||+|... +++.||||.++..... ..+.+.+|++++++++|+||+++++++...+..++||||
T Consensus 10 ~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 89 (280)
T cd05049 10 KRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEY 89 (280)
T ss_pred HhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEEec
Confidence 468999999999999853 3578999999765443 457899999999999999999999999999999999999
Q ss_pred cCCCChhHHHHhhcC---------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcc
Q 003847 553 VPNGSLANARYRKMG---------SSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLE 623 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~---------~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla 623 (791)
+++++|.+++..... .....+++.++..++.|++.||+|||+.|++||||||+||+++.++.+||+|||++
T Consensus 90 ~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~ 169 (280)
T cd05049 90 MEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMS 169 (280)
T ss_pred CCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEECCcccc
Confidence 999999999976532 11234889999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHH
Q 003847 624 RLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILL 703 (791)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ 703 (791)
+.+....... ......+++.|+|||++.+..++.++|||||||++|
T Consensus 170 ~~~~~~~~~~----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 215 (280)
T cd05049 170 RDVYTTDYYR----------------------------------VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLW 215 (280)
T ss_pred eecccCccee----------------------------------cCCCCcccceecChhhhccCCcchhhhHHHHHHHHH
Confidence 7653221100 001123567899999999999999999999999999
Q ss_pred HHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCc-cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhcc
Q 003847 704 ELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADF-EGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779 (791)
Q Consensus 704 ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 779 (791)
||++ |+.||...... +..+....+.. ......+..+.+++.+||+.||++||++.|+++.|++
T Consensus 216 e~~~~g~~p~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 216 EIFTYGKQPWYGLSNE-------------EVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred HHHhcCCCCCCCCCHH-------------HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 9998 99998543211 11111111111 1112245678999999999999999999999999864
No 89
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=4.1e-38 Score=338.73 Aligned_cols=240 Identities=23% Similarity=0.242 Sum_probs=190.5
Q ss_pred eeccccCceEEEEEEeC-CCcEEEEEEcCCCc---hhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEeccCC
Q 003847 481 YILGASGSSIMYKAVLE-DGTALAVRRIGENS---VDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
++||+|+||.||+|+.. +|+.||||+++... ....+.+..|.+++... +||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 36999999999999954 68999999997542 22345567788888754 899999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|+|.+++.... .+++..+..++.|++.||+|||+.||+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~i~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----- 150 (316)
T cd05620 81 GDLMFHIQDKG-----RFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD----- 150 (316)
T ss_pred CcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCC-----
Confidence 99999887643 38999999999999999999999999999999999999999999999999986422110
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 151 -------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~ 199 (316)
T cd05620 151 -------------------------------NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGD 199 (316)
T ss_pred -------------------------------CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCC
Confidence 0112345899999999999999999999999999999999999999653
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHH-HHH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMK-EAL 774 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl 774 (791)
... .............+......+.+++.+||+.||++||++. +++
T Consensus 200 ~~~-------------~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 200 DED-------------ELFESIRVDTPHYPRWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred CHH-------------HHHHHHHhCCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 211 1111111111111112456788999999999999999985 554
No 90
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2.4e-38 Score=342.17 Aligned_cols=241 Identities=20% Similarity=0.247 Sum_probs=189.4
Q ss_pred eccccCceEEEEEEeC-CCcEEEEEEcCCCc---hhhHHHHHHHHH-HHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 482 ILGASGSSIMYKAVLE-DGTALAVRRIGENS---VDRFRDFETQVR-VIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
.||+|+||.||+|+.. +++.||+|++.... ......+..|.. +++.++|+||+++++++...+..|+||||+++|
T Consensus 2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG 81 (325)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCC
Confidence 6999999999999954 67899999986532 122234444443 567889999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++.... .+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~L~~~~~~~~-----~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~----- 151 (325)
T cd05602 82 ELFYHLQRER-----CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG----- 151 (325)
T ss_pred cHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCC-----
Confidence 9999887643 378889999999999999999999999999999999999999999999999875321110
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 152 -------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 200 (325)
T cd05602 152 -------------------------------TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN 200 (325)
T ss_pred -------------------------------CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCC
Confidence 1123459999999999999999999999999999999999999996432
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
. .+..+................+.+++.+||+.||.+||++.+.+.+
T Consensus 201 ~-------------~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ 247 (325)
T cd05602 201 T-------------AEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFME 247 (325)
T ss_pred H-------------HHHHHHHHhCCcCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHH
Confidence 1 1111111112222222345678899999999999999998754433
No 91
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.6e-37 Score=328.28 Aligned_cols=259 Identities=23% Similarity=0.325 Sum_probs=203.2
Q ss_pred ceeccccCceEEEEEEe-CCCc----EEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEecc
Q 003847 480 AYILGASGSSIMYKAVL-EDGT----ALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
.+.||+|+||.||+|.. .+++ .|++|.+.... .....++..|+.++++++||||+++++++. ....++++||+
T Consensus 12 ~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i~e~~ 90 (279)
T cd05111 12 LKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQLVTQLS 90 (279)
T ss_pred ccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEEEEEeC
Confidence 46899999999999985 3444 47888886442 234467888999999999999999999875 45678999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
++|+|.+++..... .+++..+..|+.||+.||+|||+.+++||||||+||++++++.+||+|||+++.........
T Consensus 91 ~~gsL~~~l~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~ 166 (279)
T cd05111 91 PLGSLLDHVRQHRD----SLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKY 166 (279)
T ss_pred CCCcHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCccc
Confidence 99999999876442 38999999999999999999999999999999999999999999999999998654221100
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcch
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIV 712 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf 712 (791)
......|+..|+|||.+.+..++.++|||||||++|||++ |+.||
T Consensus 167 ----------------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~ 212 (279)
T cd05111 167 ----------------------------------FYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPY 212 (279)
T ss_pred ----------------------------------ccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCC
Confidence 0112336778999999998899999999999999999998 99898
Q ss_pred hccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCCCCCCcC
Q 003847 713 VDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSSPSPYLY 789 (791)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~p~~~ 789 (791)
.+.... ...+........ .........+.+++.+||..||++|||+.|+++.|+.+...+.+|+.
T Consensus 213 ~~~~~~----------~~~~~~~~~~~~--~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~~~~~~ 277 (279)
T cd05111 213 AGMRPH----------EVPDLLEKGERL--AQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDPPRYLV 277 (279)
T ss_pred CCCCHH----------HHHHHHHCCCcC--CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCCcceec
Confidence 653211 111221111110 11111345678899999999999999999999999999988888874
No 92
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=6.2e-38 Score=342.91 Aligned_cols=242 Identities=24% Similarity=0.348 Sum_probs=189.7
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
.+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++|+||+++++++...+..++||||+++++
T Consensus 79 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 158 (353)
T PLN00034 79 VNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGS 158 (353)
T ss_pred hhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCCc
Confidence 35799999999999995 468999999996543 2334678999999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+.. ...+..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.+.....
T Consensus 159 L~~~~---------~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~------ 223 (353)
T PLN00034 159 LEGTH---------IADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD------ 223 (353)
T ss_pred ccccc---------cCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccccc------
Confidence 86421 256778889999999999999999999999999999999999999999999886542211
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-----CCCCCchhhHHHHHHHHHHHhCCcch
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-----IKPNPKWDVYSFGVILLELLTGKVIV 712 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-----~~~~~~sDvwSlGvil~elltG~~pf 712 (791)
......||..|+|||++.. ...+.++|||||||++|||++|+.||
T Consensus 224 ------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf 273 (353)
T PLN00034 224 ------------------------------PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPF 273 (353)
T ss_pred ------------------------------cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCC
Confidence 0112358999999998743 23456899999999999999999999
Q ss_pred hccccCCCCcchhchhHHHHHHHHh-hhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 713 VDELGQGNGLLVEDKNRAIRLADAA-IRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
...... + ........ ..............+.+|+.+||+.||++||++.|+++.
T Consensus 274 ~~~~~~-------~---~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 274 GVGRQG-------D---WASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred CCCCCc-------c---HHHHHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 632111 0 01111111 011111122245678999999999999999999999975
No 93
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.2e-37 Score=335.54 Aligned_cols=258 Identities=22% Similarity=0.342 Sum_probs=202.0
Q ss_pred cceeccccCceEEEEEEeC-CCc----EEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEec
Q 003847 479 SAYILGASGSSIMYKAVLE-DGT----ALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDF 552 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~-~g~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 552 (791)
....||+|+||.||+|++. +++ .||||.++... ....+++.+|+.+++.++||||+++++++... ..++|+||
T Consensus 11 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v~e~ 89 (316)
T cd05108 11 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQL 89 (316)
T ss_pred eeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cceeeeec
Confidence 3468999999999999843 343 48999997543 34456788999999999999999999998764 57899999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCC
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 632 (791)
+++|+|.+++..... .+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.+......
T Consensus 90 ~~~g~l~~~l~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 165 (316)
T cd05108 90 MPFGCLLDYVREHKD----NIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKE 165 (316)
T ss_pred CCCCCHHHHHHhccc----cCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCCCcc
Confidence 999999999876542 3889999999999999999999999999999999999999999999999999876432211
Q ss_pred CcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcc
Q 003847 633 SKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVI 711 (791)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~p 711 (791)
.. .....++..|+|||++.+..++.++|||||||++|||++ |+.|
T Consensus 166 ~~----------------------------------~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p 211 (316)
T cd05108 166 YH----------------------------------AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 211 (316)
T ss_pred ee----------------------------------ccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCC
Confidence 00 011124667999999999999999999999999999998 9999
Q ss_pred hhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCCCCCC
Q 003847 712 VVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSSPSPY 787 (791)
Q Consensus 712 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~p~ 787 (791)
|.+.... ........... .+........+.+++.+||..+|++||++.+++..|..+...+..|
T Consensus 212 ~~~~~~~----------~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~~~~ 275 (316)
T cd05108 212 YDGIPAS----------EISSILEKGER--LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 275 (316)
T ss_pred CCCCCHH----------HHHHHHhCCCC--CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCCchh
Confidence 8643110 11111111111 1111123457889999999999999999999999999887666544
No 94
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.9e-38 Score=342.86 Aligned_cols=241 Identities=22% Similarity=0.281 Sum_probs=190.2
Q ss_pred eccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHH-HHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 482 ILGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVR-VIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
+||+|+||.||+|+. .+|+.||||++.... ....+.+..|.. +++.++||||+++++++...+..|+||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05604 2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGG 81 (325)
T ss_pred ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCC
Confidence 689999999999994 578999999996531 222344555554 567789999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|..++.... .+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~L~~~l~~~~-----~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~----- 151 (325)
T cd05604 82 ELFFHLQRER-----SFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSD----- 151 (325)
T ss_pred CHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCC-----
Confidence 9998876543 389999999999999999999999999999999999999999999999999874321100
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 152 -------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~ 200 (325)
T cd05604 152 -------------------------------TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD 200 (325)
T ss_pred -------------------------------CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCC
Confidence 1123458999999999999999999999999999999999999996531
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
. .++.+................+.+++.+|++.+|.+||++.+.++.
T Consensus 201 ~-------------~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~ 247 (325)
T cd05604 201 V-------------AEMYDNILHKPLVLRPGASLTAWSILEELLEKDRQRRLGAKEDFLE 247 (325)
T ss_pred H-------------HHHHHHHHcCCccCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHH
Confidence 1 1122222222211112245677899999999999999988644333
No 95
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.7e-37 Score=328.98 Aligned_cols=263 Identities=25% Similarity=0.383 Sum_probs=200.2
Q ss_pred ceeccccCceEEEEEEe-----CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEcc--CceEEEEec
Q 003847 480 AYILGASGSSIMYKAVL-----EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGV--DEKLIIYDF 552 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv~e~ 552 (791)
...||+|+||.||++.. .+++.||+|++........+.+.+|++++++++||||+++++++... ...++||||
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 88 (284)
T cd05081 9 IQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEY 88 (284)
T ss_pred eeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEe
Confidence 46899999999999974 35789999999877666677899999999999999999999987543 467899999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCC
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 632 (791)
+++++|.+++..... .+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++.........
T Consensus 89 ~~~~~L~~~l~~~~~----~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~ 164 (284)
T cd05081 89 LPYGSLRDYLQKHRE----RLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEY 164 (284)
T ss_pred cCCCCHHHHHHhcCc----CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCCCcc
Confidence 999999999875432 3899999999999999999999999999999999999999999999999999876432211
Q ss_pred CcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcch
Q 003847 633 SKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIV 712 (791)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf 712 (791)
.. ......++..|+|||++.+..++.++|||||||++|||++|..++
T Consensus 165 ~~---------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~ 211 (284)
T cd05081 165 YK---------------------------------VREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKS 211 (284)
T ss_pred ee---------------------------------ecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcC
Confidence 00 000112345699999999888999999999999999999987765
Q ss_pred hccccCCCCcchhc------hhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 713 VDELGQGNGLLVED------KNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 713 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
......+....... .....+...... ..+.....+..+.+++.+||+.+|++|||+.|+++.|+.++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 212 CSPPAEFMRMMGNDKQGQMIVYHLIELLKNNG--RLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred CCcchhhhhhcccccccccchHHHHHHHhcCC--cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence 33221111000000 000111111110 11111224467889999999999999999999999999874
No 96
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-40 Score=318.16 Aligned_cols=245 Identities=20% Similarity=0.340 Sum_probs=210.1
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
-..||+|+||.||+|. .++|+.||||.+.-+. ..+++..|+.+|++++.|++|++||.|......|+|||||..|++
T Consensus 38 ~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSi 115 (502)
T KOG0574|consen 38 VGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSI 115 (502)
T ss_pred HHHhcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcH
Confidence 3579999999999999 5679999999997654 357899999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+.+..+.. ++++.++..+++..++||+|||...-+|||||..|||++.+|.+||+|||.|..+.....
T Consensus 116 SDI~R~R~K----~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMA------- 184 (502)
T KOG0574|consen 116 SDIMRARRK----PLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMA------- 184 (502)
T ss_pred HHHHHHhcC----CccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHH-------
Confidence 999876653 499999999999999999999999999999999999999999999999999987653221
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccccC
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQ 718 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~ 718 (791)
......||+.|||||++....|+.++||||||++..||.-|++||.+....
T Consensus 185 -----------------------------KRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPM 235 (502)
T KOG0574|consen 185 -----------------------------KRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPM 235 (502)
T ss_pred -----------------------------hhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccc
Confidence 123456999999999999999999999999999999999999999876443
Q ss_pred CCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 719 GNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
..-.++.. ...+.+..++..+.++-+++++||...|++|-|+-++++.
T Consensus 236 RAIFMIPT----------~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 236 RAIFMIPT----------KPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred ceeEeccC----------CCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 22222211 1234455667788899999999999999999999988764
No 97
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=5.4e-38 Score=340.59 Aligned_cols=248 Identities=19% Similarity=0.242 Sum_probs=195.0
Q ss_pred ceeccccCceEEEEEEe----CCCcEEEEEEcCCC----chhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEE
Q 003847 480 AYILGASGSSIMYKAVL----EDGTALAVRRIGEN----SVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIY 550 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~----~~g~~vavK~~~~~----~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~ 550 (791)
.+.||+|+||.||+++. .+++.||+|++.+. .....+.+..|+++++++ +|+||+++++++...+..++||
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (332)
T cd05614 5 LKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLIL 84 (332)
T ss_pred EEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEE
Confidence 46899999999999984 36899999998653 222345678899999999 5999999999999999999999
Q ss_pred eccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCC
Q 003847 551 DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 630 (791)
||+++|+|.+++.... .+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++......
T Consensus 85 e~~~~g~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~ 159 (332)
T cd05614 85 DYVSGGEMFTHLYQRD-----NFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEE 159 (332)
T ss_pred eCCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccC
Confidence 9999999999887643 38999999999999999999999999999999999999999999999999987543211
Q ss_pred CCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC-CCCCchhhHHHHHHHHHHHhCC
Q 003847 631 SSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI-KPNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~~sDvwSlGvil~elltG~ 709 (791)
.. .....+||+.|+|||++.+. .++.++|||||||++|||++|+
T Consensus 160 ~~-----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~ 204 (332)
T cd05614 160 KE-----------------------------------RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGA 204 (332)
T ss_pred CC-----------------------------------ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCC
Confidence 10 11134589999999999865 4789999999999999999999
Q ss_pred cchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 003847 710 VIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRP-----SMKEALQA 776 (791)
Q Consensus 710 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 776 (791)
.||........ ...+..................+.+++.+||+.||++|| +++++++.
T Consensus 205 ~pf~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 205 SPFTLEGERNT---------QSEVSRRILKCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred CCCCCCCCCCC---------HHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 99964322111 011111111122222222456788999999999999999 77787753
No 98
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-38 Score=332.26 Aligned_cols=260 Identities=21% Similarity=0.258 Sum_probs=204.7
Q ss_pred cceeccccCceEEEEEEeCCCcEEEEEEcCCCchh-hHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 479 SAYILGASGSSIMYKAVLEDGTALAVRRIGENSVD-RFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
..+.||+|-||.|..+....+..||||.++..... ..++|.+|+++|.+++|||||+++|+|..++.+++|+|||++|+
T Consensus 542 ~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGD 621 (807)
T KOG1094|consen 542 FKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGD 621 (807)
T ss_pred hhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCc
Confidence 35789999999999999988899999999886443 45899999999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++.++.... +.-+...+|+.||+.|++||.+.++|||||.+.|+|+|.++++||+|||+++.+-..+.....++
T Consensus 622 LnqFl~aheapt---~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr 698 (807)
T KOG1094|consen 622 LNQFLSAHELPT---AETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGR 698 (807)
T ss_pred HHHHHHhccCcc---cccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCceeeecc
Confidence 999998874321 34455677999999999999999999999999999999999999999999996543332221111
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh--CCcchhcc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT--GKVIVVDE 715 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt--G~~pf~~~ 715 (791)
.+=...|||||.+.-++++.++|||+||+++||+++ ...||.+-
T Consensus 699 ----------------------------------~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~l 744 (807)
T KOG1094|consen 699 ----------------------------------AVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQL 744 (807)
T ss_pred ----------------------------------eeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhh
Confidence 112356999999999999999999999999999876 55688653
Q ss_pred ccCCCCcchhchhHHHHHHHHh-hhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 716 LGQGNGLLVEDKNRAIRLADAA-IRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
..+.. +++ ...+++.. .......+.-.+..+++++.+||..|-++||+++++...|++..
T Consensus 745 t~e~v---ven---~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~~ 805 (807)
T KOG1094|consen 745 TDEQV---VEN---AGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQEDA 805 (807)
T ss_pred hHHHH---HHh---hhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHhc
Confidence 22111 111 11111111 11111223335678899999999999999999999999887643
No 99
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.5e-38 Score=321.14 Aligned_cols=259 Identities=22% Similarity=0.271 Sum_probs=197.5
Q ss_pred eeccccCceEEEEEE-eCCCcEEEEEEcCCCchh--hHHHHHHHHHHHhccCCCC-ccceeeEEEccC------ceEEEE
Q 003847 481 YILGASGSSIMYKAV-LEDGTALAVRRIGENSVD--RFRDFETQVRVIAKLVHPN-LVRIRGFYWGVD------EKLIIY 550 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~H~n-Iv~l~~~~~~~~------~~~lv~ 550 (791)
+.||+|.||+||+|+ ..+|+.||+|++.-...+ ......+|+.++++++|+| ||++++++...+ ..++|+
T Consensus 17 eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvf 96 (323)
T KOG0594|consen 17 EKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVF 96 (323)
T ss_pred HHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEE
Confidence 469999999999999 667999999999765332 2345689999999999999 999999999877 788999
Q ss_pred eccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCC
Q 003847 551 DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 630 (791)
||+ .-+|..++....... ..++...++.+++||+.||+|||+++|+||||||.|||++++|.+||+|||+|+...-+.
T Consensus 97 e~~-d~DL~~ymd~~~~~~-~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~ 174 (323)
T KOG0594|consen 97 EFL-DRDLKKYMDSLPKKP-QGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPM 174 (323)
T ss_pred Eee-cccHHHHHHhccccc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCc
Confidence 999 469999998765321 237778999999999999999999999999999999999999999999999999543211
Q ss_pred CCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC-CCCCchhhHHHHHHHHHHHhCC
Q 003847 631 SSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI-KPNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~~sDvwSlGvil~elltG~ 709 (791)
...+..++|.-|+|||++.+. .|+...||||+|||++||++++
T Consensus 175 ------------------------------------~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~ 218 (323)
T KOG0594|consen 175 ------------------------------------RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRR 218 (323)
T ss_pred ------------------------------------ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCC
Confidence 123445688889999999876 7899999999999999999999
Q ss_pred cchhcccc-----------------CCCCcchhchhHHHHHHHHhhhcCccc---hHHHHHHHHHHHhhccCCCCCCCCC
Q 003847 710 VIVVDELG-----------------QGNGLLVEDKNRAIRLADAAIRADFEG---KEEALLSCFKLGYSCASPLPQKRPS 769 (791)
Q Consensus 710 ~pf~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs 769 (791)
..|.+..+ .|........... .+. ...+.... .........+++.+|++.+|.+|.|
T Consensus 219 ~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~-~f~--~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~S 295 (323)
T KOG0594|consen 219 PLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKA-PFP--KWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRIS 295 (323)
T ss_pred CCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccc-cCc--CCCCccchHHhccccCccHHHHHHHHhccCcccCcC
Confidence 98866433 1111110000000 000 00000000 0011136789999999999999999
Q ss_pred HHHHHHH--hccC
Q 003847 770 MKEALQA--LEKI 780 (791)
Q Consensus 770 ~~evl~~--L~~i 780 (791)
++.+++. +.++
T Consensus 296 a~~al~h~yf~~~ 308 (323)
T KOG0594|consen 296 AKGALTHPYFSEL 308 (323)
T ss_pred HHHHhcChhhccc
Confidence 9999987 5555
No 100
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1e-37 Score=329.41 Aligned_cols=245 Identities=17% Similarity=0.243 Sum_probs=192.7
Q ss_pred ccccCceEEEEEEe-CCCcEEEEEEcCCCch---hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 483 LGASGSSIMYKAVL-EDGTALAVRRIGENSV---DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 483 lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
||+|+||.||+++. .+|+.||+|.+..... ...+.+..|++++++++||||+++++++..+...++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 69999999999984 5689999999865321 2234556799999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++...... .+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++........
T Consensus 81 ~~~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~------- 150 (277)
T cd05607 81 KYHIYNVGER---GLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKT------- 150 (277)
T ss_pred HHHHHhcccc---CCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCce-------
Confidence 9887654332 388999999999999999999999999999999999999999999999999876542110
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccccC
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQ 718 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~ 718 (791)
.....|+..|+|||++.+..++.++||||+||++|||++|+.||......
T Consensus 151 ------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~ 200 (277)
T cd05607 151 ------------------------------ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK 200 (277)
T ss_pred ------------------------------eeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcch
Confidence 01224888999999999888999999999999999999999998643211
Q ss_pred CCCcchhchhHHHHHHHHhhhcCccc-hHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 719 GNGLLVEDKNRAIRLADAAIRADFEG-KEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
.. ...+........... ......++.+++.+||+.||++||+++|+++.
T Consensus 201 ~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 201 VA---------KEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDD 250 (277)
T ss_pred hh---------HHHHHHHhhccccccccccCCHHHHHHHHHHhccCHhhCCCCccchhh
Confidence 00 011111111111111 11245678899999999999999999776543
No 101
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.5e-37 Score=343.01 Aligned_cols=250 Identities=16% Similarity=0.215 Sum_probs=191.0
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
..+.||+|+||.||++.. .+++.||+|.... +.+.+|++++++++||||+++++++......++|+|++. ++
T Consensus 96 ~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~ 168 (391)
T PHA03212 96 ILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TD 168 (391)
T ss_pred EEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CC
Confidence 356899999999999994 5789999997542 356789999999999999999999999999999999995 78
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++.... .+++.+++.|+.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 169 L~~~l~~~~-----~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~------ 237 (391)
T PHA03212 169 LYCYLAAKR-----NIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINA------ 237 (391)
T ss_pred HHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccc------
Confidence 888776543 389999999999999999999999999999999999999999999999999875321110
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELG 717 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~ 717 (791)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 238 -----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~ 288 (391)
T PHA03212 238 -----------------------------NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDG 288 (391)
T ss_pred -----------------------------cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCccc
Confidence 011234599999999999998999999999999999999999987654321
Q ss_pred CCCCc----c----------------hhchhHHHHHHHHhhh---------cCccchHHHHHHHHHHHhhccCCCCCCCC
Q 003847 718 QGNGL----L----------------VEDKNRAIRLADAAIR---------ADFEGKEEALLSCFKLGYSCASPLPQKRP 768 (791)
Q Consensus 718 ~~~~~----~----------------~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~li~~cl~~dP~~RP 768 (791)
..... . ................ ..+........++.+|+.+||+.||++||
T Consensus 289 ~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rp 368 (391)
T PHA03212 289 LDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRP 368 (391)
T ss_pred ccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCC
Confidence 10000 0 0000000111100000 00011112345788999999999999999
Q ss_pred CHHHHHH
Q 003847 769 SMKEALQ 775 (791)
Q Consensus 769 s~~evl~ 775 (791)
|++|+++
T Consensus 369 ta~elL~ 375 (391)
T PHA03212 369 SAEALLD 375 (391)
T ss_pred CHHHHhc
Confidence 9999985
No 102
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.5e-37 Score=329.99 Aligned_cols=256 Identities=15% Similarity=0.222 Sum_probs=192.9
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCc--hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
...||+|+||.||+++.. +++.||||++.... ....+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 85 (287)
T cd07848 6 LGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKN 85 (287)
T ss_pred EEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCCC
Confidence 467999999999999964 68899999986542 223467889999999999999999999999999999999999987
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
.+..+..... .+++..++.++.|++.||+|||+.+|+||||||+||+++.++.+||+|||++.........
T Consensus 86 ~l~~~~~~~~-----~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~---- 156 (287)
T cd07848 86 MLELLEEMPN-----GVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNA---- 156 (287)
T ss_pred HHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccc----
Confidence 7765433221 3899999999999999999999999999999999999999999999999998865422110
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 157 -------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~ 205 (287)
T cd07848 157 -------------------------------NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGES 205 (287)
T ss_pred -------------------------------cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCC
Confidence 0112358899999999998889999999999999999999999996532
Q ss_pred cCCCCcchhc------hhHHHHH-HHHhhh----cCcc--------chHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 717 GQGNGLLVED------KNRAIRL-ADAAIR----ADFE--------GKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 717 ~~~~~~~~~~------~~~~~~~-~~~~~~----~~~~--------~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
.......+.. ....... .++... .... .....+..+.+|+.+||+.||++|||++|+++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 206 EIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred HHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 1100000000 0000000 000000 0000 00113456899999999999999999999885
No 103
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.5e-37 Score=336.90 Aligned_cols=255 Identities=21% Similarity=0.306 Sum_probs=196.5
Q ss_pred cceeccccCceEEEEEEeC-CCcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 479 SAYILGASGSSIMYKAVLE-DGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
....||+|+||.||++... +++.+|+|.+... .....+.+.+|++++++++|+||+++++++...+..++||||++++
T Consensus 9 ~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 88 (333)
T cd06650 9 KISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 88 (333)
T ss_pred eeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecCCCC
Confidence 4568999999999999954 6889999998764 3334467899999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE-KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++..+....
T Consensus 89 ~L~~~l~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~----- 158 (333)
T cd06650 89 SLDQVLKKAG-----RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----- 158 (333)
T ss_pred cHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc-----
Confidence 9999987643 38899999999999999999997 479999999999999999999999999987553211
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
.....||..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 159 ---------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 159 ---------------------------------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred ---------------------------------cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 01234888999999999988999999999999999999999998542
Q ss_pred ccCCCCcch-----------------hc--------------hhHHHHHHHHhhhcCccc--hHHHHHHHHHHHhhccCC
Q 003847 716 LGQGNGLLV-----------------ED--------------KNRAIRLADAAIRADFEG--KEEALLSCFKLGYSCASP 762 (791)
Q Consensus 716 ~~~~~~~~~-----------------~~--------------~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~ 762 (791)
......... .. ........+.......+. ......++.+|+.+||+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 285 (333)
T cd06650 206 DAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIK 285 (333)
T ss_pred chhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccC
Confidence 210000000 00 000011111111111000 001235688999999999
Q ss_pred CCCCCCCHHHHHHH
Q 003847 763 LPQKRPSMKEALQA 776 (791)
Q Consensus 763 dP~~RPs~~evl~~ 776 (791)
||++|||+.|+++.
T Consensus 286 ~P~~Rpt~~ell~h 299 (333)
T cd06650 286 NPAERADLKQLMVH 299 (333)
T ss_pred CcccCcCHHHHhhC
Confidence 99999999999754
No 104
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=6.8e-38 Score=327.24 Aligned_cols=249 Identities=31% Similarity=0.484 Sum_probs=191.7
Q ss_pred ceeccccCceEEEEEEeC-----CCcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEecc
Q 003847 480 AYILGASGSSIMYKAVLE-----DGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-----~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
.+.||.|.||.||+|.+. .+..|+||.++.. .....+.+.+|++.+++++||||++++|++...+..++||||+
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~ 83 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC 83 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 358999999999999965 3678999999664 3344688999999999999999999999999888899999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
++|+|.+++...... .+++..+..|+.||++||+|||+.+++|+||+++||+++.++.+||+|||++..........
T Consensus 84 ~~g~L~~~L~~~~~~---~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~ 160 (259)
T PF07714_consen 84 PGGSLDDYLKSKNKE---PLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYK 160 (259)
T ss_dssp TTEBHHHHHHHTCTT---TSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEE
T ss_pred ccccccccccccccc---cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999887221 48999999999999999999999999999999999999999999999999998763221110
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcch
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIV 712 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf 712 (791)
. .....+...|+|||.+.+..++.++||||||+++|||++ |+.||
T Consensus 161 ~----------------------------------~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~ 206 (259)
T PF07714_consen 161 N----------------------------------DSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPF 206 (259)
T ss_dssp E----------------------------------STTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTT
T ss_pred c----------------------------------ccccccccccccccccccccccccccccccccccccccccccccc
Confidence 0 011225567999999998889999999999999999999 67787
Q ss_pred hccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHh
Q 003847 713 VDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQAL 777 (791)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 777 (791)
.+.. .......+.+. .. .+.....+..+.+++.+||+.||++||++.++++.|
T Consensus 207 ~~~~---------~~~~~~~~~~~-~~--~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 207 SDYD---------NEEIIEKLKQG-QR--LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp TTSC---------HHHHHHHHHTT-EE--TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred cccc---------ccccccccccc-cc--ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 5431 11111122111 11 111222456788999999999999999999999986
No 105
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.5e-37 Score=329.61 Aligned_cols=248 Identities=18% Similarity=0.192 Sum_probs=197.1
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCch---hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSV---DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
..+||+|+||.||++.. .+++.||||++..... .....+.+|++++++++|+||+++++++..++..++||||+++
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 84 (285)
T cd05605 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNG 84 (285)
T ss_pred EEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCC
Confidence 46899999999999995 4689999999965422 2234577899999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|+|.+++..... ..+++..+..++.|++.||+|||+.+|+||||||+||++++++.++|+|||++........
T Consensus 85 ~~L~~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~---- 157 (285)
T cd05605 85 GDLKFHIYNMGN---PGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGET---- 157 (285)
T ss_pred CcHHHHHHhcCc---CCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCc----
Confidence 999988765432 2489999999999999999999999999999999999999999999999999876532110
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
.....|+..|+|||++.+..++.++||||+||++|||++|+.||.+.
T Consensus 158 ---------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~ 204 (285)
T cd05605 158 ---------------------------------IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQR 204 (285)
T ss_pred ---------------------------------cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCC
Confidence 11234889999999999888999999999999999999999999653
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRP-----SMKEALQA 776 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 776 (791)
.... ....+..................+.+++.+||+.||++|| +++++++.
T Consensus 205 ~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 205 KEKV---------KREEVERRVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred chhh---------HHHHHHHHhhhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 2110 0011111111111122223556788999999999999999 88898653
No 106
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=2.7e-37 Score=332.87 Aligned_cols=200 Identities=23% Similarity=0.344 Sum_probs=161.2
Q ss_pred ceeccccCceEEEEEEeC---CCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEc--cCceEEEEeccC
Q 003847 480 AYILGASGSSIMYKAVLE---DGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG--VDEKLIIYDFVP 554 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--~~~~~lv~e~~~ 554 (791)
+..||+|+||.||+|+.. +++.||+|.+..... ...+.+|++++++++||||+++++++.. ....++||||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC--cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 468999999999999854 568999999976432 2457889999999999999999999865 346789999995
Q ss_pred CCChhHHHHhhcCC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEe----cCCCCeEEeccCccccc
Q 003847 555 NGSLANARYRKMGS----SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLL----GNDMEPKIGDFGLERLV 626 (791)
Q Consensus 555 ~gsL~~~l~~~~~~----~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl----~~~~~~kL~DFGla~~~ 626 (791)
++|.+++...... ....+++..++.++.||+.||+|||+.||+||||||+|||+ +.++.+||+|||+++..
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~ 162 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 162 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceecc
Confidence 5888877543211 12248999999999999999999999999999999999999 45678999999999865
Q ss_pred CCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHH
Q 003847 627 TGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLEL 705 (791)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~el 705 (791)
...... ........||+.|+|||++.+ ..++.++||||+||++|||
T Consensus 163 ~~~~~~---------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el 209 (317)
T cd07868 163 NSPLKP---------------------------------LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAEL 209 (317)
T ss_pred CCCCcc---------------------------------ccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHH
Confidence 422110 001223458999999999876 4589999999999999999
Q ss_pred HhCCcchhcc
Q 003847 706 LTGKVIVVDE 715 (791)
Q Consensus 706 ltG~~pf~~~ 715 (791)
++|++||...
T Consensus 210 ~~g~~~f~~~ 219 (317)
T cd07868 210 LTSEPIFHCR 219 (317)
T ss_pred HhCCCCccCC
Confidence 9999999643
No 107
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=7.1e-38 Score=345.88 Aligned_cols=283 Identities=17% Similarity=0.186 Sum_probs=197.5
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
...||+|+||+||+|+. .+++.||||++.... ....+.+.+|++++++++|+||+++++++.+.+..|+||||+++
T Consensus 6 ~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~g 85 (381)
T cd05626 6 IKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPG 85 (381)
T ss_pred EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCCC
Confidence 46899999999999984 568999999996532 23346788999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|+|.+++.... .+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++...........
T Consensus 86 g~L~~~l~~~~-----~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~ 160 (381)
T cd05626 86 GDMMSLLIRME-----VFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYY 160 (381)
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccc
Confidence 99999987653 3889999999999999999999999999999999999999999999999998754322111000
Q ss_pred CCC-ccccCCcccccccccccCCCC----------CCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHH
Q 003847 636 GGS-ARNFGSKRSTASRDSFQDLGP----------GPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLE 704 (791)
Q Consensus 636 ~~~-~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~e 704 (791)
... ..................... .............+||+.|+|||++.+..++.++|||||||++||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~e 240 (381)
T cd05626 161 QKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFE 240 (381)
T ss_pred cccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHH
Confidence 000 000000000000000000000 000000111234679999999999998899999999999999999
Q ss_pred HHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhh--ccCCCCCCCCCHHHHHHH
Q 003847 705 LLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYS--CASPLPQKRPSMKEALQA 776 (791)
Q Consensus 705 lltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~--cl~~dP~~RPs~~evl~~ 776 (791)
|++|+.||...... .....+.........+.......++.+++.+ |+..+|.+||+++|+++.
T Consensus 241 lltG~~Pf~~~~~~---------~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 241 MLVGQPPFLAPTPT---------ETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred HHhCCCCCcCCCHH---------HHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 99999999653211 0111111100011111111234567788877 555666679999999874
No 108
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=5e-38 Score=339.12 Aligned_cols=237 Identities=21% Similarity=0.261 Sum_probs=188.1
Q ss_pred eeccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHH-HHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 481 YILGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVR-VIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
++||+|+||.||+|+. .+++.||+|++.... ......+..|.. +++.++||||+++++++.+.+..|+||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 3699999999999995 468999999986532 122334555554 67889999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
++|...+.... .+++..+..++.||+.||+|||+.||+||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~---- 151 (321)
T cd05603 81 GELFFHLQRER-----CFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEE---- 151 (321)
T ss_pred CCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCC----
Confidence 99988876543 388999999999999999999999999999999999999999999999999874321110
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 152 --------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 199 (321)
T cd05603 152 --------------------------------TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSR 199 (321)
T ss_pred --------------------------------ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCC
Confidence 112345899999999999989999999999999999999999999653
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMK 771 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 771 (791)
. ...+.+.........+......+.+++.+||+.||++||++.
T Consensus 200 ~-------------~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 200 D-------------VSQMYDNILHKPLQLPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred C-------------HHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 1 111222222222222223456788999999999999999764
No 109
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=9.9e-38 Score=337.20 Aligned_cols=237 Identities=21% Similarity=0.246 Sum_probs=189.7
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCC---chhhHHHHHHHHHHHhccCCC-CccceeeEEEccCceEEEEeccC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGEN---SVDRFRDFETQVRVIAKLVHP-NLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~-nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
.+.||+|+||.||+|+.. +++.||||++... .....+.+..|++++..++|+ +|+++++++...+..|+||||++
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~ 84 (324)
T cd05587 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 84 (324)
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCC
Confidence 468999999999999954 5789999999753 223446678899999999765 58899999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
+|+|.+++.... .+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 85 ~g~L~~~~~~~~-----~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~--- 156 (324)
T cd05587 85 GGDLMYHIQQVG-----KFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGK--- 156 (324)
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCC---
Confidence 999999886543 389999999999999999999999999999999999999999999999999864321100
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
.....+||+.|+|||++.+..++.++||||+||++|||+||+.||..
T Consensus 157 ---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~ 203 (324)
T cd05587 157 ---------------------------------TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDG 203 (324)
T ss_pred ---------------------------------ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCC
Confidence 11234589999999999998999999999999999999999999964
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSM 770 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 770 (791)
... .+............+......+.+++.+||..||.+|++.
T Consensus 204 ~~~-------------~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 204 EDE-------------DELFQSIMEHNVSYPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred CCH-------------HHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 321 1111111112222222245678899999999999999976
No 110
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=4.1e-37 Score=322.71 Aligned_cols=252 Identities=22% Similarity=0.388 Sum_probs=200.8
Q ss_pred cceeccccCceEEEEEEeC----CCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEecc
Q 003847 479 SAYILGASGSSIMYKAVLE----DGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
..+.||+|+||.||+|... +...||||.++... .....++.+|+.++++++|+||+++++++...+..++||||+
T Consensus 8 ~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~ 87 (266)
T cd05033 8 IEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYM 87 (266)
T ss_pred eeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEEcC
Confidence 4578999999999999864 24689999987643 333467889999999999999999999999999999999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
++++|.+++..... .+++..+..++.|++.||+|||+++|+||||||+||++++++.+||+|||+++.........
T Consensus 88 ~~~~L~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~ 163 (266)
T cd05033 88 ENGSLDKFLRENDG----KFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATY 163 (266)
T ss_pred CCCCHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccccccce
Confidence 99999999876543 48999999999999999999999999999999999999999999999999998764211100
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcch
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIV 712 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf 712 (791)
. .....++..|+|||.+.+..++.++||||||+++|||++ |..||
T Consensus 164 ~----------------------------------~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~ 209 (266)
T cd05033 164 T----------------------------------TKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPY 209 (266)
T ss_pred e----------------------------------ccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCC
Confidence 0 001124567999999998899999999999999999998 88888
Q ss_pred hccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 713 VDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
..... . ...+...... ..+.....+..+.+++.+||+.+|++||++.|+++.|+++
T Consensus 210 ~~~~~---------~-~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 210 WDMSN---------Q-DVIKAVEDGY--RLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CCCCH---------H-HHHHHHHcCC--CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 54211 0 1111111110 1111223456789999999999999999999999999875
No 111
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=6.6e-37 Score=317.95 Aligned_cols=247 Identities=26% Similarity=0.382 Sum_probs=197.9
Q ss_pred eeccccCceEEEEEEeCCCcEEEEEEcCCCch-hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCChh
Q 003847 481 YILGASGSSIMYKAVLEDGTALAVRRIGENSV-DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLA 559 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 559 (791)
++||+|+||.||+|...+++.||+|.+..... .....+.+|++++++++||||+++++++...+..++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 37899999999999988899999999876543 33457889999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCCc
Q 003847 560 NARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639 (791)
Q Consensus 560 ~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~ 639 (791)
+++..... .+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++..........
T Consensus 81 ~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~------ 150 (250)
T cd05085 81 SFLRKKKD----ELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSS------ 150 (250)
T ss_pred HHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceecccccccc------
Confidence 98865432 38899999999999999999999999999999999999999999999999987543211000
Q ss_pred cccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhccccC
Q 003847 640 RNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDELGQ 718 (791)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~ 718 (791)
.....++..|+|||++.+..++.++||||||+++||+++ |..||......
T Consensus 151 -----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~ 201 (250)
T cd05085 151 -----------------------------SGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ 201 (250)
T ss_pred -----------------------------CCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH
Confidence 001124567999999998889999999999999999998 88898543111
Q ss_pred CCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhc
Q 003847 719 GNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALE 778 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 778 (791)
............. .....+..+.+++.+|++.+|++||++.|++++|.
T Consensus 202 ----------~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 202 ----------QAREQVEKGYRMS--CPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred ----------HHHHHHHcCCCCC--CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 0111111111111 11224567899999999999999999999999985
No 112
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=6.6e-38 Score=344.45 Aligned_cols=282 Identities=16% Similarity=0.176 Sum_probs=198.6
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
.+.||+|+||.||+|+. .+|+.||||++.... ......+.+|+++++.++||||+++++++.+++..|+||||+++
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~ 85 (364)
T cd05599 6 IKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPG 85 (364)
T ss_pred EEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCC
Confidence 46899999999999995 468999999997532 23345678899999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|+|.+++.... .+++..++.++.|++.||+|||+.||+||||||+|||++.++.+||+|||+++.+.........
T Consensus 86 g~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 160 (364)
T cd05599 86 GDMMTLLMKKD-----TFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFY 160 (364)
T ss_pred cHHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccccc
Confidence 99999987643 3899999999999999999999999999999999999999999999999999865432211100
Q ss_pred CCCccccCCc--ccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 636 GGSARNFGSK--RSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 636 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
.......... ...........................+||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~ 240 (364)
T cd05599 161 RILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFC 240 (364)
T ss_pred ccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCC
Confidence 0000000000 00000000000000000000001123569999999999999899999999999999999999999996
Q ss_pred ccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCC---HHHHHHH
Q 003847 714 DELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPS---MKEALQA 776 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~~ 776 (791)
..... .....+.........+........+.+++.+|+. +|.+|++ ++|+++.
T Consensus 241 ~~~~~---------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 241 SDNPQ---------ETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred CCCHH---------HHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 53211 0111111100000111111234577889999996 9999998 8888773
No 113
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=7.2e-38 Score=340.59 Aligned_cols=258 Identities=23% Similarity=0.324 Sum_probs=191.0
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccC-----ceEEEEe
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVD-----EKLIIYD 551 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-----~~~lv~e 551 (791)
.+.||+|+||.||+|+. .+|+.||||++... .......+.+|++++++++||||+++++++.... ..|+|||
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e 84 (338)
T cd07859 5 QEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFE 84 (338)
T ss_pred EEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEe
Confidence 46899999999999994 57899999998743 2233457889999999999999999999886433 4799999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTS 631 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 631 (791)
|+. ++|.+++.... .+++..+..++.||++||+|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 85 ~~~-~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~ 158 (338)
T cd07859 85 LME-SDLHQVIKAND-----DLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 158 (338)
T ss_pred cCC-CCHHHHHHhcc-----cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccC
Confidence 995 68988876543 389999999999999999999999999999999999999999999999999876432111
Q ss_pred CCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC--CCCCCchhhHHHHHHHHHHHhCC
Q 003847 632 SSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS--IKPNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~--~~~~~~sDvwSlGvil~elltG~ 709 (791)
.. .......||+.|+|||++.+ ..++.++|||||||++|||++|+
T Consensus 159 ~~---------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~ 205 (338)
T cd07859 159 TA---------------------------------IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK 205 (338)
T ss_pred cc---------------------------------ccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCC
Confidence 00 01123458999999999875 67899999999999999999999
Q ss_pred cchhccccCCCCcc------------hhc--hhHHHHHHHHhhhcCccch----HHHHHHHHHHHhhccCCCCCCCCCHH
Q 003847 710 VIVVDELGQGNGLL------------VED--KNRAIRLADAAIRADFEGK----EEALLSCFKLGYSCASPLPQKRPSMK 771 (791)
Q Consensus 710 ~pf~~~~~~~~~~~------------~~~--~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~ 771 (791)
.||........... ... ................... ......+.+++.+||+.||++|||++
T Consensus 206 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~ 285 (338)
T cd07859 206 PLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAE 285 (338)
T ss_pred CCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHH
Confidence 99865321000000 000 0000001110000000000 01234678999999999999999999
Q ss_pred HHHHH
Q 003847 772 EALQA 776 (791)
Q Consensus 772 evl~~ 776 (791)
|+++.
T Consensus 286 e~l~h 290 (338)
T cd07859 286 EALAD 290 (338)
T ss_pred HHhcC
Confidence 99965
No 114
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=5e-37 Score=324.52 Aligned_cols=258 Identities=23% Similarity=0.351 Sum_probs=203.9
Q ss_pred ceeccccCceEEEEEEe-CCCc----EEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEecc
Q 003847 480 AYILGASGSSIMYKAVL-EDGT----ALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
.+.||+|+||+||+|+. .+++ .||+|++... .....+.+.+|+.+++.++|+||+++++++.. ...++++||+
T Consensus 12 ~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~~~~~ 90 (279)
T cd05109 12 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQLVTQLM 90 (279)
T ss_pred eeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEEEEEcC
Confidence 46899999999999984 4454 5899998754 33445678899999999999999999999875 4578999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
++|+|.+++..... .+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++.........
T Consensus 91 ~~g~l~~~l~~~~~----~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~ 166 (279)
T cd05109 91 PYGCLLDYVRENKD----RIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEY 166 (279)
T ss_pred CCCCHHHHHhhccC----CCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeeccccccee
Confidence 99999998876432 38999999999999999999999999999999999999999999999999998764321110
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcch
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIV 712 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf 712 (791)
. .....++..|+|||...+..++.++|||||||++|||++ |..||
T Consensus 167 ~----------------------------------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~ 212 (279)
T cd05109 167 H----------------------------------ADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPY 212 (279)
T ss_pred e----------------------------------cCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCC
Confidence 0 001124567999999998899999999999999999998 88888
Q ss_pred hccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCCCCCCc
Q 003847 713 VDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSSPSPYL 788 (791)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~p~~ 788 (791)
..... ............ .+........+.+++.+||+.||++||++.++++.|+++...+.||.
T Consensus 213 ~~~~~----------~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~~~~~ 276 (279)
T cd05109 213 DGIPA----------REIPDLLEKGER--LPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDPSRFV 276 (279)
T ss_pred CCCCH----------HHHHHHHHCCCc--CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCCcCeE
Confidence 54211 111111111111 11122245678899999999999999999999999999999988874
No 115
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=4.8e-37 Score=320.35 Aligned_cols=246 Identities=25% Similarity=0.348 Sum_probs=197.6
Q ss_pred ceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCChh
Q 003847 480 AYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLA 559 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 559 (791)
...||+|+||.||++...++..||||.+..... ..+.+.+|+.++++++||||+++++++...+..++||||+++++|.
T Consensus 9 ~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~ 87 (256)
T cd05113 9 LKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLL 87 (256)
T ss_pred eeEecCcccceEEEEEecCCCcEEEEEcCCCcc-cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHH
Confidence 357999999999999987777899999876533 2367899999999999999999999999988999999999999999
Q ss_pred HHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCCc
Q 003847 560 NARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639 (791)
Q Consensus 560 ~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~ 639 (791)
+++..... .+++..++.++.||+.||+|||+.|++|+||||+||+++.++.+||+|||.++........
T Consensus 88 ~~i~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~------- 156 (256)
T cd05113 88 NYLREHGK----RFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYT------- 156 (256)
T ss_pred HHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCcee-------
Confidence 98876432 3899999999999999999999999999999999999999999999999998765322110
Q ss_pred cccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhccccC
Q 003847 640 RNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDELGQ 718 (791)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~ 718 (791)
......++..|+|||.+.+..++.++|||||||++|||++ |+.||.....
T Consensus 157 ----------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~- 207 (256)
T cd05113 157 ----------------------------SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN- 207 (256)
T ss_pred ----------------------------ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH-
Confidence 0011225667999999988889999999999999999999 8888854211
Q ss_pred CCCcchhchhHHHHHHHHhhhcC-ccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhc
Q 003847 719 GNGLLVEDKNRAIRLADAAIRAD-FEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALE 778 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 778 (791)
.+..+...... ..........+.+++.+||+.+|.+||++.++++.|+
T Consensus 208 ------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 208 ------------SETVEKVSQGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred ------------HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 01111111111 0111124567899999999999999999999998875
No 116
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.1e-37 Score=342.44 Aligned_cols=249 Identities=17% Similarity=0.187 Sum_probs=196.1
Q ss_pred hcceeccccCceEEEEEEe-CCCcEEEEEEcCCC---chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEecc
Q 003847 478 ASAYILGASGSSIMYKAVL-EDGTALAVRRIGEN---SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
...+.||+|+||.||+++. .+++.||+|++... .....+.+.+|+.+++.++||||+++++++.+.+..|+||||+
T Consensus 46 ~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey~ 125 (370)
T cd05596 46 DVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYM 125 (370)
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcCC
Confidence 3457899999999999995 46899999999643 1223355788999999999999999999999999999999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
++|+|.+++... .+++..+..++.|++.||+|||+.||+||||||+|||++.++.+||+|||++.........
T Consensus 126 ~gg~L~~~l~~~------~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~- 198 (370)
T cd05596 126 PGGDLVNLMSNY------DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMV- 198 (370)
T ss_pred CCCcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcc-
Confidence 999999988653 2788899999999999999999999999999999999999999999999998765321110
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC----CCCCchhhHHHHHHHHHHHhCC
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI----KPNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~----~~~~~sDvwSlGvil~elltG~ 709 (791)
.....+||+.|+|||++.+. .++.++|||||||++|||++|+
T Consensus 199 ----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~ 244 (370)
T cd05596 199 ----------------------------------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD 244 (370)
T ss_pred ----------------------------------cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCC
Confidence 11234599999999998653 4789999999999999999999
Q ss_pred cchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 003847 710 VIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQK--RPSMKEALQA 776 (791)
Q Consensus 710 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 776 (791)
.||...... .....+........++.....+..+.+++.+||..+|++ |++++|+++.
T Consensus 245 ~Pf~~~~~~---------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 245 TPFYADSLV---------GTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred CCcCCCCHH---------HHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 999654210 011111111111111221124567889999999999988 9999999764
No 117
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.1e-37 Score=340.00 Aligned_cols=277 Identities=17% Similarity=0.179 Sum_probs=194.8
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
.+.||+|+||+||+|+. .+++.||||++.... ......+.+|+.++.+++|+||+++++.+.+....|+||||+++
T Consensus 6 ~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~g 85 (363)
T cd05628 6 LKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPG 85 (363)
T ss_pred eEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCC
Confidence 46899999999999984 468999999997532 22345688899999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|+|.+++.... .+++..++.++.|++.||+|||+.||+||||||+|||++.++.+||+|||+++.+.........
T Consensus 86 g~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~ 160 (363)
T cd05628 86 GDMMTLLMKKD-----TLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFY 160 (363)
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccccc
Confidence 99999987643 3899999999999999999999999999999999999999999999999999866432211000
Q ss_pred CCCccccCCcccccccccccCCC-C----CCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLG-P----GPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~ 710 (791)
......... ...+.... . .............+||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 161 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~ 234 (363)
T cd05628 161 RNLNHSLPS------DFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (363)
T ss_pred ccccccccc------cccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCC
Confidence 000000000 00000000 0 000000111234679999999999999999999999999999999999999
Q ss_pred chhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccC--CCCCCCCCHHHHHHH
Q 003847 711 IVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCAS--PLPQKRPSMKEALQA 776 (791)
Q Consensus 711 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~--~dP~~RPs~~evl~~ 776 (791)
||...... .....+........++........+.+++.+|+. .++..||+++|+++.
T Consensus 235 Pf~~~~~~---------~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 235 PFCSETPQ---------ETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCCCCCHH---------HHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 99653211 0011111100000111111134566777777554 233356899999875
No 118
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=5.1e-37 Score=320.34 Aligned_cols=248 Identities=21% Similarity=0.325 Sum_probs=194.9
Q ss_pred ccccCceEEEEEEeC---CCcEEEEEEcCCCch-hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 483 LGASGSSIMYKAVLE---DGTALAVRRIGENSV-DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 483 lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
||+|+||.||+|... ++..||+|++..... ...+.+.+|+.++++++|+||+++++++. .+..++||||+++++|
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~L 81 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGPL 81 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCCH
Confidence 899999999999753 456799999976533 33467899999999999999999999875 4578999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++..... .+++..+++++.|++.||+|||+.|++||||||+||+++.++.+||+|||++...........
T Consensus 82 ~~~l~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~---- 153 (257)
T cd05115 82 NKFLSGKKD----EITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYK---- 153 (257)
T ss_pred HHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCcccee----
Confidence 998875432 389999999999999999999999999999999999999999999999999876543221100
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhcccc
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDELG 717 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~ 717 (791)
......++..|+|||.+....++.++|||||||++||+++ |+.||.+...
T Consensus 154 -----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~ 204 (257)
T cd05115 154 -----------------------------ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKG 204 (257)
T ss_pred -----------------------------ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCH
Confidence 0011123567999999988889999999999999999996 9999865321
Q ss_pred CCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 718 QGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
. ............ ..+.....++.+++.+||..+|++||++.+|.+.|+.+
T Consensus 205 ~----------~~~~~~~~~~~~--~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 205 P----------EVMSFIEQGKRL--DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred H----------HHHHHHHCCCCC--CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 1 111111111111 11122457888999999999999999999999999865
No 119
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2.9e-37 Score=330.41 Aligned_cols=250 Identities=20% Similarity=0.258 Sum_probs=189.3
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCch-hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENSV-DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
...||+|+||.||+|+.. +++.||||++..... .....+.+|++++++++||||+++++++.+.+..++||||++ ++
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~ 88 (303)
T cd07869 10 LEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVH-TD 88 (303)
T ss_pred eeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCC-cC
Confidence 468999999999999954 789999999875432 223467789999999999999999999999999999999995 67
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++..... .+++..+..++.|++.||+|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 89 l~~~~~~~~~----~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~------ 158 (303)
T cd07869 89 LCQYMDKHPG----GLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSH------ 158 (303)
T ss_pred HHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCc------
Confidence 8777765432 388999999999999999999999999999999999999999999999999875421110
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+..
T Consensus 159 ------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 208 (303)
T cd07869 159 ------------------------------TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMK 208 (303)
T ss_pred ------------------------------cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCc
Confidence 1112347899999999865 457899999999999999999999996531
Q ss_pred cCCCCcchhchhHHHHHH-----------------HHh-hhc-CccchH------HHHHHHHHHHhhccCCCCCCCCCHH
Q 003847 717 GQGNGLLVEDKNRAIRLA-----------------DAA-IRA-DFEGKE------EALLSCFKLGYSCASPLPQKRPSMK 771 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~-----------------~~~-~~~-~~~~~~------~~~~~l~~li~~cl~~dP~~RPs~~ 771 (791)
.. ...+ ....... ++. ... ...... .....+.+++.+||+.||++|||++
T Consensus 209 ~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~ 283 (303)
T cd07869 209 DI--QDQL---ERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQ 283 (303)
T ss_pred cH--HHHH---HHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHH
Confidence 10 0000 0000000 000 000 000000 0124577999999999999999999
Q ss_pred HHHH
Q 003847 772 EALQ 775 (791)
Q Consensus 772 evl~ 775 (791)
|+++
T Consensus 284 ~~l~ 287 (303)
T cd07869 284 AALS 287 (303)
T ss_pred HHhc
Confidence 9986
No 120
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.5e-37 Score=335.94 Aligned_cols=242 Identities=20% Similarity=0.252 Sum_probs=191.4
Q ss_pred eccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEeccCCC
Q 003847 482 ILGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
+||+|+||.||+|.. .+++.||+|+++... ....+.+.+|+.++.++ +||||+++++++...+..|+||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGG 81 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence 699999999999995 567999999997642 23345688899999888 6999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++.... .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~L~~~~~~~~-----~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~----- 151 (327)
T cd05617 82 DLMFHMQRQR-----KLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGD----- 151 (327)
T ss_pred cHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCC-----
Confidence 9998876543 399999999999999999999999999999999999999999999999999874321110
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 152 -------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~ 200 (327)
T cd05617 152 -------------------------------TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIIT 200 (327)
T ss_pred -------------------------------ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccC
Confidence 1123458999999999999999999999999999999999999996432
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCH
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSM 770 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 770 (791)
....... . ..............+......+.+++.+||+.||++|+++
T Consensus 201 ~~~~~~~---~---~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 201 DNPDMNT---E---DYLFQVILEKPIRIPRFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred CCccccc---H---HHHHHHHHhCCCCCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 2111110 0 1111111112222222245677899999999999999985
No 121
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.2e-37 Score=343.75 Aligned_cols=282 Identities=16% Similarity=0.171 Sum_probs=196.6
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
.+.||+|+||.||++. ..+++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..|+||||+++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~g 85 (377)
T cd05629 6 VKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPG 85 (377)
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCC
Confidence 4689999999999998 4578999999986532 23346788999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|+|.+++.... .+++..++.++.|++.||+|||+.||+||||||+|||++.++.+||+|||+++...........
T Consensus 86 g~L~~~l~~~~-----~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 160 (377)
T cd05629 86 GDLMTMLIKYD-----TFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYY 160 (377)
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence 99999887543 3889999999999999999999999999999999999999999999999999754321111000
Q ss_pred CCCccccCCcccccccccccCCCCCC-----------CCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHH
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGP-----------SPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLE 704 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~e 704 (791)
.......................... ...........+||+.|+|||++.+..++.++|||||||++||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e 240 (377)
T cd05629 161 QKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFE 240 (377)
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhh
Confidence 00000000000000000000000000 0000001123579999999999999899999999999999999
Q ss_pred HHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCC---CCHHHHHHH
Q 003847 705 LLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKR---PSMKEALQA 776 (791)
Q Consensus 705 lltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Ps~~evl~~ 776 (791)
|++|+.||...... .....+........++........+.+++.+|+. +|.+| +++.|+++.
T Consensus 241 lltG~~Pf~~~~~~---------~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 241 CLIGWPPFCSENSH---------ETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred hhcCCCCCCCCCHH---------HHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence 99999999653211 0011111100001111111234577899999997 67665 599998875
No 122
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=4.2e-38 Score=340.94 Aligned_cols=192 Identities=25% Similarity=0.372 Sum_probs=167.6
Q ss_pred cceeccccCceEEEEEE-eCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccC-C-----CCccceeeEEEccCceEEEEe
Q 003847 479 SAYILGASGSSIMYKAV-LEDGTALAVRRIGENSVDRFRDFETQVRVIAKLV-H-----PNLVRIRGFYWGVDEKLIIYD 551 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H-----~nIv~l~~~~~~~~~~~lv~e 551 (791)
..++||+|.||.|.+|. .++++.||||+++.... ...+...|+++|..|+ | -|||+++++|...++.|||+|
T Consensus 190 V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfE 268 (586)
T KOG0667|consen 190 VLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFE 268 (586)
T ss_pred EEEEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeeh
Confidence 45799999999999999 66799999999987633 3466788999999996 4 389999999999999999999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCC--CCeEEeccCcccccCCC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGND--MEPKIGDFGLERLVTGD 629 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~--~~~kL~DFGla~~~~~~ 629 (791)
.+ .-+|+++++.+.-.+ ++...++.|+.||+.||.+||+.+|||+||||+||||.+. ..+||+|||.+......
T Consensus 269 LL-~~NLYellK~n~f~G---lsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~ 344 (586)
T KOG0667|consen 269 LL-STNLYELLKNNKFRG---LSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQR 344 (586)
T ss_pred hh-hhhHHHHHHhcCCCC---CCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCc
Confidence 99 579999999877654 9999999999999999999999999999999999999643 36999999999876532
Q ss_pred CCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCC
Q 003847 630 TSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~ 709 (791)
.. .++-+..|+|||++.+.+|+.+.||||||||++||++|.
T Consensus 345 vy---------------------------------------tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~ 385 (586)
T KOG0667|consen 345 VY---------------------------------------TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGE 385 (586)
T ss_pred ce---------------------------------------eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCc
Confidence 21 234567799999999999999999999999999999998
Q ss_pred cchhc
Q 003847 710 VIVVD 714 (791)
Q Consensus 710 ~pf~~ 714 (791)
+.|.+
T Consensus 386 PLfpG 390 (586)
T KOG0667|consen 386 PLFPG 390 (586)
T ss_pred cccCC
Confidence 87754
No 123
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=4.8e-37 Score=320.51 Aligned_cols=248 Identities=22% Similarity=0.323 Sum_probs=196.2
Q ss_pred eccccCceEEEEEEe---CCCcEEEEEEcCCCc--hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 482 ILGASGSSIMYKAVL---EDGTALAVRRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~~---~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
.||+|+||.||+|.. .++..+|+|+++... ....+++.+|+.++++++|+||+++++++. .+..++||||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 589999999999964 357899999986543 334567899999999999999999999875 45678999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++.... .+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++.+........
T Consensus 81 ~L~~~l~~~~-----~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~-- 153 (257)
T cd05116 81 PLNKFLQKNK-----HVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK-- 153 (257)
T ss_pred cHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeee--
Confidence 9999886543 389999999999999999999999999999999999999999999999999987643221100
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhcc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDE 715 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~ 715 (791)
......++..|+|||.+....++.++|||||||++|||++ |+.||...
T Consensus 154 -------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~ 202 (257)
T cd05116 154 -------------------------------AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGM 202 (257)
T ss_pred -------------------------------ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 0011124577999999988889999999999999999998 89998643
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
... ............. .+...+..+.+++.+||+.||++||++.+|.+.|++.
T Consensus 203 ~~~----------~~~~~i~~~~~~~--~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 203 KGN----------EVTQMIESGERME--CPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred CHH----------HHHHHHHCCCCCC--CCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 111 1122222111111 1222556788999999999999999999999999863
No 124
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.3e-37 Score=336.06 Aligned_cols=237 Identities=22% Similarity=0.257 Sum_probs=190.3
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCc---hhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEeccC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENS---VDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
...||+|+||.||+|+.. +++.||||++.... ....+.+..|.+++..+ +|++|+++++++...+..++||||++
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~ 84 (323)
T cd05616 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVN 84 (323)
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCC
Confidence 468999999999999854 67899999987542 22334567788888777 58999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
+|+|.+++.... .+++.++..++.|++.||+|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 85 ~g~L~~~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~--- 156 (323)
T cd05616 85 GGDLMYQIQQVG-----RFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGV--- 156 (323)
T ss_pred CCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCC---
Confidence 999998886543 389999999999999999999999999999999999999999999999999875321110
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
.....+||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 157 ---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~ 203 (323)
T cd05616 157 ---------------------------------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 203 (323)
T ss_pred ---------------------------------ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCC
Confidence 11234589999999999999999999999999999999999999965
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSM 770 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 770 (791)
... ..+...........+......+.+++.+|++.||++|++.
T Consensus 204 ~~~-------------~~~~~~i~~~~~~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 204 EDE-------------DELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred CCH-------------HHHHHHHHhCCCCCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 321 1111112222222222355678899999999999999984
No 125
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=4.7e-37 Score=322.37 Aligned_cols=254 Identities=21% Similarity=0.311 Sum_probs=202.8
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC---chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN---SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
.+.||+|+||.||+|+. .+++.||||.+... .......+.+|++++++++||||+++++++...+..++|+||+++
T Consensus 7 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 86 (267)
T cd08228 7 EKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADA 86 (267)
T ss_pred eeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecCC
Confidence 46799999999999994 57899999987542 233345788999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
++|.+++....... ..+++..+..++.|++.||+|||+++++|+||||+||+++.++.++|+|||++.........
T Consensus 87 ~~L~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~--- 162 (267)
T cd08228 87 GDLSQMIKYFKKQK-RLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA--- 162 (267)
T ss_pred CcHHHHHHHhhhcc-CCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhHH---
Confidence 99999886533211 24889999999999999999999999999999999999999999999999998865422110
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
.....|+..|+|||.+.+..++.++||||||+++|||++|+.||...
T Consensus 163 ---------------------------------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~ 209 (267)
T cd08228 163 ---------------------------------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 209 (267)
T ss_pred ---------------------------------HhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccc
Confidence 01234788899999998888999999999999999999999998543
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCcc--chHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFE--GKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
... ...+.+.......+ ........+.+++.+||..+|++||++.+|++.|+.++
T Consensus 210 ~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 210 KMN-----------LFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred ccc-----------HHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 211 01111111111111 11234567899999999999999999999999998875
No 126
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=4.8e-37 Score=320.32 Aligned_cols=247 Identities=27% Similarity=0.408 Sum_probs=197.3
Q ss_pred ceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCChh
Q 003847 480 AYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLA 559 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 559 (791)
.+.||+|+||.||++..+++..+|+|.+..... ...++.+|++++++++|+||+++++++...+..++||||+++++|.
T Consensus 9 ~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 87 (256)
T cd05059 9 LKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLL 87 (256)
T ss_pred hhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHH
Confidence 467999999999999987788999999875433 2356888999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCCc
Q 003847 560 NARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639 (791)
Q Consensus 560 ~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~ 639 (791)
+++..... .+++..++.++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++.........
T Consensus 88 ~~l~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~------ 157 (256)
T cd05059 88 NYLRERKG----KLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTS------ 157 (256)
T ss_pred HHHHhccc----CCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccccc------
Confidence 99876442 38999999999999999999999999999999999999999999999999987653211100
Q ss_pred cccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhccccC
Q 003847 640 RNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDELGQ 718 (791)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~ 718 (791)
.....++..|+|||.+.+..++.++||||||+++|||++ |+.||......
T Consensus 158 -----------------------------~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~ 208 (256)
T cd05059 158 -----------------------------SQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS 208 (256)
T ss_pred -----------------------------cCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH
Confidence 001113456999999998899999999999999999999 78888543111
Q ss_pred CCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhc
Q 003847 719 GNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALE 778 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 778 (791)
. ........... ......+..+.+++.+||+.+|++|||+.|+++.|.
T Consensus 209 ---------~-~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l~ 256 (256)
T cd05059 209 ---------E-VVESVSAGYRL--YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQLT 256 (256)
T ss_pred ---------H-HHHHHHcCCcC--CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence 0 11111111111 111224667899999999999999999999999873
No 127
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=4.6e-37 Score=321.63 Aligned_cols=239 Identities=23% Similarity=0.310 Sum_probs=189.0
Q ss_pred eccccCceEEEEEEeCC-------------CcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEE
Q 003847 482 ILGASGSSIMYKAVLED-------------GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLI 548 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~~~~-------------g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 548 (791)
.||+|+||.||+|...+ ...||+|.+..........+.+|+.+++.++||||+++++++..+...++
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~l 81 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIM 81 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEE
Confidence 68999999999998432 23699999877655556678899999999999999999999999999999
Q ss_pred EEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCC-------eEEeccC
Q 003847 549 IYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDME-------PKIGDFG 621 (791)
Q Consensus 549 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~-------~kL~DFG 621 (791)
||||+++++|..++..... .+++..++.++.||+.||+|||+++|+||||||+|||++.++. +|++|||
T Consensus 82 v~e~~~~~~l~~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g 157 (262)
T cd05077 82 VEEFVEFGPLDLFMHRKSD----VLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPG 157 (262)
T ss_pred EEecccCCCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence 9999999999988765432 3899999999999999999999999999999999999987654 8999999
Q ss_pred cccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc-CCCCCCchhhHHHHH
Q 003847 622 LERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR-SIKPNPKWDVYSFGV 700 (791)
Q Consensus 622 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~-~~~~~~~sDvwSlGv 700 (791)
++...... ....|+..|+|||.+. +..++.++|||||||
T Consensus 158 ~~~~~~~~----------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~ 197 (262)
T cd05077 158 IPITVLSR----------------------------------------QECVERIPWIAPECVEDSKNLSIAADKWSFGT 197 (262)
T ss_pred CCccccCc----------------------------------------ccccccccccChhhhcCCCCCCchhHHHHHHH
Confidence 88654211 1123678899999986 467899999999999
Q ss_pred HHHHHH-hCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhc
Q 003847 701 ILLELL-TGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALE 778 (791)
Q Consensus 701 il~ell-tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 778 (791)
++|||+ +|+.||..... .+ ....... ...........+.+|+.+||+.||++||++.++++.++
T Consensus 198 ~l~el~~~~~~p~~~~~~-------~~---~~~~~~~----~~~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 198 TLWEICYNGEIPLKDKTL-------AE---KERFYEG----QCMLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred HHHHHHhCCCCCCCCcch-------hH---HHHHHhc----CccCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 999998 57777754211 01 0111111 11111113456789999999999999999999998874
No 128
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=2.5e-37 Score=350.63 Aligned_cols=249 Identities=21% Similarity=0.263 Sum_probs=198.5
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccC--------ceEE
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVD--------EKLI 548 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~--------~~~l 548 (791)
.++||+|+||+||+|+ ..+|+.||||++... .......+.+|+.++..++|+||+++++.+...+ ..++
T Consensus 37 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~l 116 (496)
T PTZ00283 37 SRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIAL 116 (496)
T ss_pred EEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEE
Confidence 4689999999999998 457999999998654 3344567889999999999999999988775433 3679
Q ss_pred EEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCC
Q 003847 549 IYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTG 628 (791)
Q Consensus 549 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 628 (791)
||||+++|+|.+++...... ...+++..+..++.|++.||+|||+.+|+||||||+|||++.++.+||+|||+++.+..
T Consensus 117 V~Ey~~~gsL~~~l~~~~~~-~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~ 195 (496)
T PTZ00283 117 VLDYANAGDLRQEIKSRAKT-NRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAA 195 (496)
T ss_pred EEeCCCCCcHHHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecccCeeccc
Confidence 99999999999998764322 23589999999999999999999999999999999999999999999999999986542
Q ss_pred CCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhC
Q 003847 629 DTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTG 708 (791)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG 708 (791)
.... ......+||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 196 ~~~~----------------------------------~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG 241 (496)
T PTZ00283 196 TVSD----------------------------------DVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTL 241 (496)
T ss_pred cccc----------------------------------cccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHC
Confidence 2110 011234699999999999999999999999999999999999
Q ss_pred CcchhccccCCCCcchhchhHHHHHHHHhhhcCcc-chHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 709 KVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFE-GKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 709 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
+.||.... ..++......+... .+......+.+++.+||+.||++||++.++++.
T Consensus 242 ~~Pf~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 242 KRPFDGEN-------------MEEVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CCCCCCCC-------------HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 99996431 11222222222111 122245678899999999999999999999864
No 129
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=3.7e-37 Score=326.27 Aligned_cols=262 Identities=24% Similarity=0.335 Sum_probs=198.8
Q ss_pred cceeccccCceEEEEEEe-----CCCcEEEEEEcCCCch-hhHHHHHHHHHHHhccCCCCccceeeEEEcc--CceEEEE
Q 003847 479 SAYILGASGSSIMYKAVL-----EDGTALAVRRIGENSV-DRFRDFETQVRVIAKLVHPNLVRIRGFYWGV--DEKLIIY 550 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv~ 550 (791)
....||+|+||+||++.. .+++.||+|.+..... ...+.+.+|++++++++||||+++++++... ...++||
T Consensus 8 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 87 (283)
T cd05080 8 KIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIM 87 (283)
T ss_pred eceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEe
Confidence 346899999999988652 3578999999976532 3456788999999999999999999988764 3578999
Q ss_pred eccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCC
Q 003847 551 DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 630 (791)
||+++++|.+++... .+++..++.++.|++.||+|||+.+|+||||||+||+++.++.+||+|||+++......
T Consensus 88 e~~~~~~l~~~~~~~------~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 161 (283)
T cd05080 88 EYVPLGSLRDYLPKH------KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH 161 (283)
T ss_pred cCCCCCCHHHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcc
Confidence 999999999988653 28999999999999999999999999999999999999999999999999988654321
Q ss_pred CCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCc
Q 003847 631 SSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~ 710 (791)
.... ......++..|+|||.+.+..++.++||||||+++|||+||+.
T Consensus 162 ~~~~---------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~ 208 (283)
T cd05080 162 EYYR---------------------------------VREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCD 208 (283)
T ss_pred hhhc---------------------------------cCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCC
Confidence 1100 0011225567999999988889999999999999999999999
Q ss_pred chhccccCCCCcc-----hhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 711 IVVDELGQGNGLL-----VEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 711 pf~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
||........... ...........+..... +.....+..+.+++.+||+.+|++|||++++++.|+++.
T Consensus 209 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 209 SKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRL--PCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred CCCCCcchhhhhhcccccccchhhhhhhhhcCCCC--CCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 8754321100000 00000111111111111 111224568899999999999999999999999998874
No 130
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.6e-37 Score=340.90 Aligned_cols=249 Identities=18% Similarity=0.192 Sum_probs=194.5
Q ss_pred hcceeccccCceEEEEEEe-CCCcEEEEEEcCCC---chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEecc
Q 003847 478 ASAYILGASGSSIMYKAVL-EDGTALAVRRIGEN---SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
.....||+|+||.||+++. .+++.||+|++.+. .....+.+.+|+.+++.++||||+++++++.+++..|+||||+
T Consensus 46 ~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~ 125 (370)
T cd05621 46 DVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYM 125 (370)
T ss_pred eEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCC
Confidence 3457899999999999995 46899999998642 2223456788999999999999999999999999999999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
++|+|.+++... .+++..+..++.||+.||+|||+.+|+||||||+|||++.++.+||+|||++.........
T Consensus 126 ~gg~L~~~l~~~------~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~- 198 (370)
T cd05621 126 PGGDLVNLMSNY------DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMV- 198 (370)
T ss_pred CCCcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCce-
Confidence 999999988653 2888999999999999999999999999999999999999999999999999865321110
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC----CCCCchhhHHHHHHHHHHHhCC
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI----KPNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~----~~~~~sDvwSlGvil~elltG~ 709 (791)
.....+||+.|+|||++.+. .++.++||||+||++|||++|+
T Consensus 199 ----------------------------------~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~ 244 (370)
T cd05621 199 ----------------------------------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGD 244 (370)
T ss_pred ----------------------------------ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCC
Confidence 11234599999999998753 3788999999999999999999
Q ss_pred cchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 003847 710 VIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQK--RPSMKEALQA 776 (791)
Q Consensus 710 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 776 (791)
.||..... ......+.+......++........+.+++.+|+..++.+ |+++.|+++.
T Consensus 245 ~Pf~~~~~---------~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 245 TPFYADSL---------VGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred CCCCCCCH---------HHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 99965321 0111222221111112222224567788999999865544 8899999876
No 131
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=4e-37 Score=333.76 Aligned_cols=258 Identities=24% Similarity=0.330 Sum_probs=199.1
Q ss_pred ceeccccCceEEEEEEe------CCCcEEEEEEcCCCc-hhhHHHHHHHHHHHhcc-CCCCccceeeEEEcc-CceEEEE
Q 003847 480 AYILGASGSSIMYKAVL------EDGTALAVRRIGENS-VDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGV-DEKLIIY 550 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~-~~~~lv~ 550 (791)
.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+.+++++ +|+||+++++++... ...+++|
T Consensus 12 ~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ 91 (337)
T cd05054 12 GKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 91 (337)
T ss_pred hcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEE
Confidence 56899999999999963 235789999997542 33446788899999999 899999999988754 5678999
Q ss_pred eccCCCChhHHHHhhcCC--------------------------------------------------------CCCCCC
Q 003847 551 DFVPNGSLANARYRKMGS--------------------------------------------------------SPCHLP 574 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~--------------------------------------------------------~~~~l~ 574 (791)
||+++++|.+++...... ...+++
T Consensus 92 ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 171 (337)
T cd05054 92 EYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLT 171 (337)
T ss_pred ecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCC
Confidence 999999999998653211 012589
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCCccccCCcccccccccc
Q 003847 575 WEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSF 654 (791)
Q Consensus 575 ~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (791)
+..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.+.......
T Consensus 172 ~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~--------------------- 230 (337)
T cd05054 172 LEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV--------------------- 230 (337)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchh---------------------
Confidence 99999999999999999999999999999999999999999999999998764221110
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhccccCCCCcchhchhHHHHH
Q 003847 655 QDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDELGQGNGLLVEDKNRAIRL 733 (791)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~ 733 (791)
......++..|+|||++.+..++.++|||||||++|||++ |+.||.+.... ......
T Consensus 231 -------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~---------~~~~~~ 288 (337)
T cd05054 231 -------------RKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQID---------EEFCRR 288 (337)
T ss_pred -------------hccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCcc---------HHHHHH
Confidence 0112235677999999999999999999999999999998 99998653111 001111
Q ss_pred HHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCC
Q 003847 734 ADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPS 782 (791)
Q Consensus 734 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 782 (791)
....... .........+.+++.+||+.+|++||++.|+++.|+++..
T Consensus 289 ~~~~~~~--~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 289 LKEGTRM--RAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HhccCCC--CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1111111 1112245678999999999999999999999999987654
No 132
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=8e-37 Score=322.59 Aligned_cols=255 Identities=22% Similarity=0.325 Sum_probs=197.6
Q ss_pred cceeccccCceEEEEEEeC------CCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEe
Q 003847 479 SAYILGASGSSIMYKAVLE------DGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYD 551 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 551 (791)
....||+|+||.||+|... +++.||||.+.... .....++.+|+.+++.++|+||+++++++...+..++|||
T Consensus 10 ~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~e 89 (277)
T cd05062 10 MSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 89 (277)
T ss_pred eeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEEEe
Confidence 3568999999999998743 35789999986532 2344578899999999999999999999999999999999
Q ss_pred ccCCCChhHHHHhhcCCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCccccc
Q 003847 552 FVPNGSLANARYRKMGSS-----PCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLV 626 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~-----~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 626 (791)
|+++++|.+++....... ...+++..+..++.|++.||+|||+.+++||||||+||++++++.+||+|||+++..
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~ 169 (277)
T cd05062 90 LMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 169 (277)
T ss_pred cCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCCCCcccc
Confidence 999999999987543210 123678899999999999999999999999999999999999999999999998765
Q ss_pred CCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHH
Q 003847 627 TGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELL 706 (791)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ell 706 (791)
........ .....++..|+|||++.+..++.++|||||||++|||+
T Consensus 170 ~~~~~~~~----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~ 215 (277)
T cd05062 170 YETDYYRK----------------------------------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 215 (277)
T ss_pred CCcceeec----------------------------------CCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHH
Confidence 42211000 00123567899999999888999999999999999999
Q ss_pred h-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhcc
Q 003847 707 T-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779 (791)
Q Consensus 707 t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 779 (791)
+ |..||...... ...+....... .......+..+.+++.+||+.||++|||+.|+++.|++
T Consensus 216 ~~~~~p~~~~~~~----------~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 216 TLAEQPYQGMSNE----------QVLRFVMEGGL--LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred cCCCCCCCCCCHH----------HHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 9 67787543110 11111111100 11112245678999999999999999999999999874
No 133
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=7.2e-37 Score=319.75 Aligned_cols=248 Identities=23% Similarity=0.360 Sum_probs=198.3
Q ss_pred ceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCChh
Q 003847 480 AYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLA 559 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 559 (791)
...||+|+||.||+|..+++..||+|.+...... .+.+.+|+.++++++|+||+++++++. .+..+++|||+++++|.
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~-~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~ 88 (260)
T cd05070 11 IKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMS-PESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSKGSLL 88 (260)
T ss_pred hheeccccCceEEEEEecCCceeEEEEecCCCCC-HHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCCCcHH
Confidence 4679999999999999888889999999765332 367899999999999999999999874 56689999999999999
Q ss_pred HHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCCc
Q 003847 560 NARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639 (791)
Q Consensus 560 ~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~ 639 (791)
+++..... ..+++.+++.++.|++.||+|||+.+|+||||||+||++++++.+||+|||++..........
T Consensus 89 ~~~~~~~~---~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~------ 159 (260)
T cd05070 89 DFLKDGEG---RALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTA------ 159 (260)
T ss_pred HHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCccccc------
Confidence 99876432 238999999999999999999999999999999999999999999999999998654321100
Q ss_pred cccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhccccC
Q 003847 640 RNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDELGQ 718 (791)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~ 718 (791)
.....++..|+|||.+.+..++.++||||||+++|||++ |+.||.+....
T Consensus 160 -----------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~ 210 (260)
T cd05070 160 -----------------------------RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR 210 (260)
T ss_pred -----------------------------ccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 001124567999999988889999999999999999999 88888543110
Q ss_pred CCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhcc
Q 003847 719 GNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 779 (791)
...+...... ..+.....+..+.+++.+|+..+|++|||+.++.+.|++
T Consensus 211 ----------~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 211 ----------EVLEQVERGY--RMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred ----------HHHHHHHcCC--CCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 1111111111 111222345678999999999999999999999999975
No 134
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=6.9e-38 Score=342.49 Aligned_cols=275 Identities=19% Similarity=0.228 Sum_probs=202.3
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
...||+|+||.||+|+.. +|+.||||++.... ......+..|+++++.++|+||+++++++.+.+..++||||+++
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 85 (350)
T cd05573 6 IKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPG 85 (350)
T ss_pred EEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCC
Confidence 468999999999999954 78999999997532 23456788999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
++|.+++.... .+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||++............
T Consensus 86 ~~L~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~ 160 (350)
T cd05573 86 GDLMNLLIRKD-----VFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYY 160 (350)
T ss_pred CCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccc
Confidence 99999987652 3899999999999999999999999999999999999999999999999999876543211000
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
......... ......................||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 161 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~ 233 (350)
T cd05573 161 LNDSHNLLF-------RDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSD 233 (350)
T ss_pred ccccccccc-------cccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCC
Confidence 000000000 0000000000000111223456999999999999999999999999999999999999999654
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCC-HHHHHHH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPS-MKEALQA 776 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~ 776 (791)
... .....+.........+........+.+++.+|+. ||.+||+ ++|+++.
T Consensus 234 ~~~---------~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 234 TLQ---------ETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred CHH---------HHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 211 1111111100001111111135678899999997 9999999 9999874
No 135
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-38 Score=324.05 Aligned_cols=242 Identities=23% Similarity=0.303 Sum_probs=205.6
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCCchhh--HHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGENSVDR--FRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
.+-||+|.|++|-.|+ .-+|+.||||++.+...+. ...+.+|++.|+.++|||||++|++...+...|+|+|+-.+|
T Consensus 23 ekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~G 102 (864)
T KOG4717|consen 23 EKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGG 102 (864)
T ss_pred hhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCCc
Confidence 4579999999999998 4589999999998764443 346788999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEe-cCCCCeEEeccCcccccCCCCCCCcC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLL-GNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl-~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
+|++||.++.. .+.+...++++.||+.|+.|+|+..+|||||||+||.+ .+-|-|||.|||++..+.+
T Consensus 103 Dl~DyImKHe~----Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P------- 171 (864)
T KOG4717|consen 103 DLFDYIMKHEE----GLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP------- 171 (864)
T ss_pred hHHHHHHhhhc----cccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCC-------
Confidence 99999987653 39999999999999999999999999999999999876 4568899999999876542
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCC-CchhhHHHHHHHHHHHhCCcchhc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPN-PKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~-~~sDvwSlGvil~elltG~~pf~~ 714 (791)
.......||+..|.|||++.+..|+ +++||||||||||-|++|++||..
T Consensus 172 ------------------------------G~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqe 221 (864)
T KOG4717|consen 172 ------------------------------GKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQE 221 (864)
T ss_pred ------------------------------cchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCcccc
Confidence 2345567899999999999998885 689999999999999999999976
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
..+... +..+.| ..+..+.....++.+||..||..||++|.+.+||..
T Consensus 222 ANDSET---------LTmImD----CKYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 222 ANDSET---------LTMIMD----CKYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred ccchhh---------hhhhhc----ccccCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 533322 222222 334445557889999999999999999999999975
No 136
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=8.8e-37 Score=323.32 Aligned_cols=254 Identities=22% Similarity=0.349 Sum_probs=199.7
Q ss_pred ceeccccCceEEEEEEe-----CCCcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEecc
Q 003847 480 AYILGASGSSIMYKAVL-----EDGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-----~~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
.+.||+|+||.||+|.. .+++.||+|.+... .......+.+|++++++++||||+++++++...+..++||||+
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 89 (283)
T cd05090 10 MEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYL 89 (283)
T ss_pred eeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEcC
Confidence 36899999999999983 35689999999754 3344567899999999999999999999999999999999999
Q ss_pred CCCChhHHHHhhcC------------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccC
Q 003847 554 PNGSLANARYRKMG------------SSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFG 621 (791)
Q Consensus 554 ~~gsL~~~l~~~~~------------~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFG 621 (791)
++++|.+++..... .....+++.++..++.|++.||+|||+++|+||||||+||+++.++.+||+|||
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg 169 (283)
T cd05090 90 NQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLG 169 (283)
T ss_pred CCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEecccc
Confidence 99999999864321 011247889999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHH
Q 003847 622 LERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVI 701 (791)
Q Consensus 622 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvi 701 (791)
+++......... ......++..|+|||++.+..++.++|||||||+
T Consensus 170 ~~~~~~~~~~~~----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i 215 (283)
T cd05090 170 LSREIYSADYYR----------------------------------VQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVV 215 (283)
T ss_pred ccccccCCccee----------------------------------cccCCCccceecChHHhccCCCCchhhhHHHHHH
Confidence 998654221100 0112235677999999988889999999999999
Q ss_pred HHHHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhcc
Q 003847 702 LLELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779 (791)
Q Consensus 702 l~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 779 (791)
+|||++ |..||..... ....+...... ..+........+.+++.+||+.||++||++.++++.|+.
T Consensus 216 l~el~~~g~~p~~~~~~----------~~~~~~~~~~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 216 LWEIFSFGLQPYYGFSN----------QEVIEMVRKRQ--LLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHcCCCCCCCCCCH----------HHHHHHHHcCC--cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 999998 8888854211 01111111111 111122245678899999999999999999999999875
No 137
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=6.1e-37 Score=326.26 Aligned_cols=259 Identities=24% Similarity=0.342 Sum_probs=202.1
Q ss_pred hhcceeccccCceEEEEEEeC------CCcEEEEEEcCCC-chhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEE
Q 003847 477 KASAYILGASGSSIMYKAVLE------DGTALAVRRIGEN-SVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLI 548 (791)
Q Consensus 477 ~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 548 (791)
+...+.||+|+||.||++... ....+|+|.+... ......++.+|+++++++ +|+||+++++++...+..++
T Consensus 14 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l 93 (293)
T cd05053 14 LTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYV 93 (293)
T ss_pred eEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEE
Confidence 344578999999999999853 2368999999764 333446788999999999 89999999999999999999
Q ss_pred EEeccCCCChhHHHHhhcC-----------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEE
Q 003847 549 IYDFVPNGSLANARYRKMG-----------SSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKI 617 (791)
Q Consensus 549 v~e~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL 617 (791)
+|||+++|+|.+++..... .....+++..++.++.|++.||+|||+.+|+||||||+||+++.++.+||
T Consensus 94 i~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL 173 (293)
T cd05053 94 VVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKI 173 (293)
T ss_pred EEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCCeEEe
Confidence 9999999999999875421 11235899999999999999999999999999999999999999999999
Q ss_pred eccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHH
Q 003847 618 GDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYS 697 (791)
Q Consensus 618 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS 697 (791)
+|||+++.+........ .....++..|+|||++.+..++.++||||
T Consensus 174 ~Dfg~~~~~~~~~~~~~----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~s 219 (293)
T cd05053 174 ADFGLARDIHHIDYYRK----------------------------------TTNGRLPVKWMAPEALFDRVYTHQSDVWS 219 (293)
T ss_pred Cccccccccccccceec----------------------------------cCCCCCCccccCHHHhccCCcCcccceee
Confidence 99999987643211000 01112456799999998888999999999
Q ss_pred HHHHHHHHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 698 FGVILLELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 698 lGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
|||++|||++ |..||..... ............. .........+.+++.+||..||++|||+.|+++.
T Consensus 220 lG~il~el~~~g~~p~~~~~~----------~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 220 FGVLLWEIFTLGGSPYPGIPV----------EELFKLLKEGYRM--EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred hhhHHHHHhcCCCCCCCCCCH----------HHHHHHHHcCCcC--CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 9999999998 8888754211 0111111111111 1112245678899999999999999999999999
Q ss_pred hccCC
Q 003847 777 LEKIP 781 (791)
Q Consensus 777 L~~i~ 781 (791)
|+++.
T Consensus 288 l~~~~ 292 (293)
T cd05053 288 LDRML 292 (293)
T ss_pred HHHhh
Confidence 98764
No 138
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=6.2e-38 Score=339.84 Aligned_cols=247 Identities=17% Similarity=0.194 Sum_probs=196.3
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
...||+|+||.||+++. .+|+.||+|+++... ....+.+.+|+.+++.++|+||+++++++.+.+..++||||+++
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 85 (330)
T cd05601 6 KSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPG 85 (330)
T ss_pred EEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCCC
Confidence 46899999999999994 478999999997642 23446788999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|+|.+++..... .+++..+..++.|++.||+|||+.+|+||||||+|||++.++.+||+|||++..+......
T Consensus 86 ~~L~~~l~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~--- 158 (330)
T cd05601 86 GDLLSLLNRYED----QFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMV--- 158 (330)
T ss_pred CCHHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCce---
Confidence 999999876532 3899999999999999999999999999999999999999999999999999866432110
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc------CCCCCCchhhHHHHHHHHHHHhCC
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR------SIKPNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~------~~~~~~~sDvwSlGvil~elltG~ 709 (791)
......||+.|+|||++. ...++.++|||||||++|||++|+
T Consensus 159 --------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~ 206 (330)
T cd05601 159 --------------------------------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGR 206 (330)
T ss_pred --------------------------------eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCC
Confidence 011234899999999986 456789999999999999999999
Q ss_pred cchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 710 VIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 710 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
.||...... .....+........++........+.+++..|+. +|++||+++++++
T Consensus 207 ~Pf~~~~~~---------~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 207 SPFHEGTSA---------KTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred CCCCCCCHH---------HHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 999653211 0111111111011112111245678889999998 9999999999985
No 139
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=2.8e-37 Score=333.31 Aligned_cols=237 Identities=21% Similarity=0.250 Sum_probs=190.6
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccC-CCCccceeeEEEccCceEEEEeccC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVRVIAKLV-HPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
..+||+|+||.||+|+. .+|+.||+|++.... ....+.+..|.++++.+. |++|+++++++...+..|+||||++
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~ 84 (323)
T cd05615 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVN 84 (323)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCC
Confidence 46899999999999994 568999999987532 233456778888988885 5778899999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
+|+|.+++.... .+++.++..++.|++.||+|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 85 ~g~L~~~i~~~~-----~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~--- 156 (323)
T cd05615 85 GGDLMYHIQQVG-----KFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGV--- 156 (323)
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCc---
Confidence 999999886643 389999999999999999999999999999999999999999999999999875321110
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
......||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 157 ---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~ 203 (323)
T cd05615 157 ---------------------------------TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDG 203 (323)
T ss_pred ---------------------------------cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCC
Confidence 11234589999999999998999999999999999999999999965
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSM 770 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 770 (791)
... ..............+......+.+++.+||+.+|.+|++.
T Consensus 204 ~~~-------------~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 204 EDE-------------DELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred CCH-------------HHHHHHHHhCCCCCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 321 1111222222222222345678899999999999999975
No 140
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=5.7e-37 Score=325.96 Aligned_cols=246 Identities=24% Similarity=0.288 Sum_probs=186.5
Q ss_pred ceeccccCceEEEEEEe-C-CCcEEEEEEcCCCc--hhhHHHHHHHHHHHhcc---CCCCccceeeEEEc-----cCceE
Q 003847 480 AYILGASGSSIMYKAVL-E-DGTALAVRRIGENS--VDRFRDFETQVRVIAKL---VHPNLVRIRGFYWG-----VDEKL 547 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~~-----~~~~~ 547 (791)
.+.||+|+||.||+|+. . +++.||||++.... ......+.+|+.+++.+ +||||+++++++.. ....+
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~ 85 (290)
T cd07862 6 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 85 (290)
T ss_pred eeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEE
Confidence 46799999999999985 3 47889999986532 22224556677777665 69999999999853 34689
Q ss_pred EEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccC
Q 003847 548 IIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVT 627 (791)
Q Consensus 548 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~ 627 (791)
+||||++ ++|.+++...... .+++..+..++.|++.||+|||+.||+||||||+|||++.++.+||+|||+++...
T Consensus 86 lv~e~~~-~~l~~~~~~~~~~---~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T cd07862 86 LVFEHVD-QDLTTYLDKVPEP---GVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS 161 (290)
T ss_pred EEEccCC-CCHHHHHHhCCCC---CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEecc
Confidence 9999996 6899888754332 38999999999999999999999999999999999999999999999999987653
Q ss_pred CCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh
Q 003847 628 GDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT 707 (791)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt 707 (791)
... ......||+.|+|||++.+..++.++|||||||++|||++
T Consensus 162 ~~~-------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~ 204 (290)
T cd07862 162 FQM-------------------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR 204 (290)
T ss_pred CCc-------------------------------------ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHc
Confidence 211 1112348999999999988899999999999999999999
Q ss_pred CCcchhccccCCCCcchhchhHHHHHHHH------------------hhhcCccc-----hHHHHHHHHHHHhhccCCCC
Q 003847 708 GKVIVVDELGQGNGLLVEDKNRAIRLADA------------------AIRADFEG-----KEEALLSCFKLGYSCASPLP 764 (791)
Q Consensus 708 G~~pf~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~-----~~~~~~~l~~li~~cl~~dP 764 (791)
|++||.+..... ....+.+. ........ .......+.+++.+||+.||
T Consensus 205 g~~~f~~~~~~~---------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P 275 (290)
T cd07862 205 RKPLFRGSSDVD---------QLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNP 275 (290)
T ss_pred CCCCcCCCCHHH---------HHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCc
Confidence 999996542210 00111100 00000000 00123466899999999999
Q ss_pred CCCCCHHHHHH
Q 003847 765 QKRPSMKEALQ 775 (791)
Q Consensus 765 ~~RPs~~evl~ 775 (791)
++|||+.|+++
T Consensus 276 ~~R~s~~~~l~ 286 (290)
T cd07862 276 AKRISAYSALS 286 (290)
T ss_pred hhcCCHHHHhc
Confidence 99999999985
No 141
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.1e-36 Score=317.39 Aligned_cols=246 Identities=27% Similarity=0.403 Sum_probs=200.6
Q ss_pred cceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 479 SAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
....||+|+||.||+|... |+.||||.+..... ..+++.+|+.++++++|+||+++++++...+..++||||+++++|
T Consensus 10 ~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L 87 (256)
T cd05039 10 LGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSL 87 (256)
T ss_pred ceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcH
Confidence 3568999999999999875 78999999987654 457899999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++...... .+++..+..++.|++.||.|||+.|++||||||+||+++.++.+||+|||.++.......
T Consensus 88 ~~~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~------- 157 (256)
T cd05039 88 VDYLRSRGRA---VITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD------- 157 (256)
T ss_pred HHHHHhcCCC---CCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccccc-------
Confidence 9998765432 389999999999999999999999999999999999999999999999999886532111
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhcccc
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDELG 717 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~ 717 (791)
...++..|+|||++....++.++||||||+++|||++ |+.||.....
T Consensus 158 --------------------------------~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~ 205 (256)
T cd05039 158 --------------------------------SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL 205 (256)
T ss_pred --------------------------------cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH
Confidence 1113456999999988889999999999999999997 8888854311
Q ss_pred CCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 718 QGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
. ............ ......+..+.+++.+||..+|++||++.|++++|+.+
T Consensus 206 ~----------~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 206 K----------DVVPHVEKGYRM--EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred H----------HHHHHHhcCCCC--CCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 0 111111111111 11122457788999999999999999999999999865
No 142
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=8.5e-37 Score=336.93 Aligned_cols=259 Identities=22% Similarity=0.268 Sum_probs=201.1
Q ss_pred hhcceeccccCceEEEEEEeC------CCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccC-CCCccceeeEEEccCceEE
Q 003847 477 KASAYILGASGSSIMYKAVLE------DGTALAVRRIGENS-VDRFRDFETQVRVIAKLV-HPNLVRIRGFYWGVDEKLI 548 (791)
Q Consensus 477 ~~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~l 548 (791)
....+.||+|+||.||+|+.. .++.||||+++... ....+.+.+|++++.++. ||||+++++++...+..++
T Consensus 39 ~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~i 118 (401)
T cd05107 39 LVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYI 118 (401)
T ss_pred eehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEE
Confidence 334678999999999999853 34689999997653 223457889999999997 9999999999999999999
Q ss_pred EEeccCCCChhHHHHhhcCC------------------------------------------------------------
Q 003847 549 IYDFVPNGSLANARYRKMGS------------------------------------------------------------ 568 (791)
Q Consensus 549 v~e~~~~gsL~~~l~~~~~~------------------------------------------------------------ 568 (791)
||||+++|+|.++++.....
T Consensus 119 v~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (401)
T cd05107 119 ITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGT 198 (401)
T ss_pred EEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhh
Confidence 99999999999999764310
Q ss_pred ---------------------------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCe
Q 003847 569 ---------------------------------SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP 615 (791)
Q Consensus 569 ---------------------------------~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~ 615 (791)
....+++..+..|+.|++.||+|||+.+|+||||||+|||+++++.+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~ 278 (401)
T cd05107 199 VKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLV 278 (401)
T ss_pred hhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEE
Confidence 01236788899999999999999999999999999999999999999
Q ss_pred EEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhh
Q 003847 616 KIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDV 695 (791)
Q Consensus 616 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDv 695 (791)
||+|||+++......... ......++..|+|||.+.+..++.++||
T Consensus 279 kL~DfGla~~~~~~~~~~----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 324 (401)
T cd05107 279 KICDFGLARDIMRDSNYI----------------------------------SKGSTFLPLKWMAPESIFNNLYTTLSDV 324 (401)
T ss_pred EEEecCcceecccccccc----------------------------------cCCCcCCCCceeChHHhcCCCCCcHhHH
Confidence 999999998653221100 0012236788999999998889999999
Q ss_pred HHHHHHHHHHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 003847 696 YSFGVILLELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEAL 774 (791)
Q Consensus 696 wSlGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 774 (791)
|||||++|||++ |+.||..... ............... .+......+.+++.+||..+|++||+++||+
T Consensus 325 wslGvil~e~l~~g~~P~~~~~~---------~~~~~~~~~~~~~~~--~p~~~~~~l~~li~~cl~~~P~~RPs~~ell 393 (401)
T cd05107 325 WSFGILLWEIFTLGGTPYPELPM---------NEQFYNAIKRGYRMA--KPAHASDEIYEIMQKCWEEKFEIRPDFSQLV 393 (401)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCc---------hHHHHHHHHcCCCCC--CCCCCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence 999999999998 8888754210 011111111111111 1112456788999999999999999999999
Q ss_pred HHhccC
Q 003847 775 QALEKI 780 (791)
Q Consensus 775 ~~L~~i 780 (791)
+.|+++
T Consensus 394 ~~L~~~ 399 (401)
T cd05107 394 HLVGDL 399 (401)
T ss_pred HHHHHH
Confidence 999875
No 143
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=7.4e-37 Score=324.10 Aligned_cols=268 Identities=24% Similarity=0.348 Sum_probs=201.2
Q ss_pred hhhcceeccccCceEEEEEEe-----CCCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEcc--CceE
Q 003847 476 LKASAYILGASGSSIMYKAVL-----EDGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGV--DEKL 547 (791)
Q Consensus 476 ~~~~~~~lG~G~~g~Vy~~~~-----~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~ 547 (791)
.+..-..||+|+||.||.++. .++..||+|.++... ....+.+.+|++++++++|+||+++++++... ...+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 344556899999999999973 357899999997553 33456799999999999999999999998875 5678
Q ss_pred EEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccC
Q 003847 548 IIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVT 627 (791)
Q Consensus 548 lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~ 627 (791)
+||||+++++|.+++..... .+++.++..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++.+.
T Consensus 85 lv~e~~~g~~L~~~l~~~~~----~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRNKN----KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 160 (284)
T ss_pred EEEEccCCCCHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccc
Confidence 99999999999999865432 38999999999999999999999999999999999999999999999999988654
Q ss_pred CCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh
Q 003847 628 GDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT 707 (791)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt 707 (791)
....... ......|+..|+|||++.+..++.++|||||||++|||++
T Consensus 161 ~~~~~~~---------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt 207 (284)
T cd05079 161 TDKEYYT---------------------------------VKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLT 207 (284)
T ss_pred cCcccee---------------------------------ecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhc
Confidence 3211100 0112336777999999988889999999999999999999
Q ss_pred CCcchhccccCCCCcc--hhchhHHHHHHHHhhhc-CccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 708 GKVIVVDELGQGNGLL--VEDKNRAIRLADAAIRA-DFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 708 G~~pf~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
++.|+........... ................+ ..+.....+..+.+|+.+||+.+|++||+++++++.|++|
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 208 YCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred CCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 8776432211000000 00000001111110000 1111222456889999999999999999999999999876
No 144
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.2e-36 Score=317.55 Aligned_cols=250 Identities=26% Similarity=0.393 Sum_probs=197.4
Q ss_pred eeccccCceEEEEEEeC-C---CcEEEEEEcCCCch-hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 481 YILGASGSSIMYKAVLE-D---GTALAVRRIGENSV-DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~-~---g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
+.||+|+||.||+|+.. . +..||+|.+..... ...+++.+|++++++++|+||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 36999999999999742 2 37899999986543 34567899999999999999999999875 4568999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
++|.+++.... .+++..+..++.|++.||+|||+.+++||||||+||+++.++.+||+|||+++..........
T Consensus 80 ~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~- 153 (257)
T cd05060 80 GPLLKYLKKRR-----EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYR- 153 (257)
T ss_pred CcHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccc-
Confidence 99999987654 389999999999999999999999999999999999999999999999999886643221100
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVD 714 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~ 714 (791)
......++..|+|||.+.+..++.++||||||+++|||++ |+.||..
T Consensus 154 --------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~ 201 (257)
T cd05060 154 --------------------------------ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGE 201 (257)
T ss_pred --------------------------------cccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCccc
Confidence 0001114567999999998899999999999999999998 8999854
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
.... .......... ..+.....+..+.+++.+||..+|++||++.++++.|+++.
T Consensus 202 ~~~~----------~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 202 MKGA----------EVIAMLESGE--RLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred CCHH----------HHHHHHHcCC--cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 3211 1111111111 11112224567889999999999999999999999999875
No 145
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.9e-37 Score=342.80 Aligned_cols=281 Identities=18% Similarity=0.219 Sum_probs=196.0
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
.+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|++++++++|+||+++++.+.+.+..|+||||+++
T Consensus 6 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~g 85 (382)
T cd05625 6 IKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPG 85 (382)
T ss_pred EEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCCC
Confidence 46899999999999994 568999999997542 23346788999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|+|.+++.... .+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||++............
T Consensus 86 g~L~~~l~~~~-----~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~ 160 (382)
T cd05625 86 GDMMSLLIRMG-----IFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY 160 (382)
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCcccccccccccc
Confidence 99999887643 3889999999999999999999999999999999999999999999999998654321110000
Q ss_pred CC--Cc----cccCCccccc----ccccccCCC-CCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHH
Q 003847 636 GG--SA----RNFGSKRSTA----SRDSFQDLG-PGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLE 704 (791)
Q Consensus 636 ~~--~~----~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~e 704 (791)
.. .. ..+....... ......... ..............+||+.|+|||++.+..++.++|||||||++||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~e 240 (382)
T cd05625 161 QSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 240 (382)
T ss_pred ccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHH
Confidence 00 00 0000000000 000000000 0000000111234679999999999999999999999999999999
Q ss_pred HHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCC---HHHHHH
Q 003847 705 LLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPS---MKEALQ 775 (791)
Q Consensus 705 lltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~ 775 (791)
|++|+.||...... .....+.........+.......++.+++.+|+ .+|++|++ +.|+++
T Consensus 241 lltG~~Pf~~~~~~---------~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 304 (382)
T cd05625 241 MLVGQPPFLAQTPL---------ETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKA 304 (382)
T ss_pred HHhCCCCCCCCCHH---------HHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence 99999999653211 011111110000111111224556778887876 59999987 888765
No 146
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.1e-36 Score=325.61 Aligned_cols=256 Identities=26% Similarity=0.336 Sum_probs=201.4
Q ss_pred hhcceeccccCceEEEEEEe------CCCcEEEEEEcCCCc-hhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEE
Q 003847 477 KASAYILGASGSSIMYKAVL------EDGTALAVRRIGENS-VDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLI 548 (791)
Q Consensus 477 ~~~~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 548 (791)
+...+.||+|+||.||++.. .++..||||+++... ....+.+.+|+++++++ +|+||+++++++...+..++
T Consensus 37 ~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~l 116 (302)
T cd05055 37 LSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILV 116 (302)
T ss_pred eEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEE
Confidence 44567899999999999973 235689999987643 33446789999999999 79999999999999999999
Q ss_pred EEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCC
Q 003847 549 IYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTG 628 (791)
Q Consensus 549 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 628 (791)
||||+++|+|.+++...... .+++.++..++.|++.||+|||+.+|+|+||||+||+++.++.+||+|||+++....
T Consensus 117 v~e~~~~~~L~~~i~~~~~~---~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~ 193 (302)
T cd05055 117 ITEYCCYGDLLNFLRRKRES---FLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMN 193 (302)
T ss_pred EEEcCCCCcHHHHHHhCCCC---CCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccccccC
Confidence 99999999999998764322 389999999999999999999999999999999999999999999999999876542
Q ss_pred CCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-
Q 003847 629 DTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT- 707 (791)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt- 707 (791)
..... ......++..|+|||.+.+..++.++||||+||++|||++
T Consensus 194 ~~~~~----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~ 239 (302)
T cd05055 194 DSNYV----------------------------------VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSL 239 (302)
T ss_pred CCcee----------------------------------ecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhC
Confidence 21100 0011235678999999998889999999999999999998
Q ss_pred CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 708 GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 708 G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
|+.||..... ............... ........+.+++.+||+.+|++||++.|+++.|+++
T Consensus 240 g~~p~~~~~~---------~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 240 GSNPYPGMPV---------DSKFYKLIKEGYRMA--QPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred CCCCcCCCCc---------hHHHHHHHHcCCcCC--CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 8889854311 011111211111111 1112346788999999999999999999999999864
No 147
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1e-36 Score=320.70 Aligned_cols=254 Identities=24% Similarity=0.340 Sum_probs=195.7
Q ss_pred ceeccccCceEEEEEEeCC-Cc--EEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEcc------CceEE
Q 003847 480 AYILGASGSSIMYKAVLED-GT--ALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGV------DEKLI 548 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~-g~--~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~~~~l 548 (791)
.+.||+|+||.||+|...+ ++ .||+|.++.. .....+.+..|++++++++|+||+++++++... ...++
T Consensus 4 ~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~ 83 (272)
T cd05075 4 GKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVV 83 (272)
T ss_pred ccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEE
Confidence 4689999999999999644 33 6999998754 344457789999999999999999999987532 24689
Q ss_pred EEeccCCCChhHHHHhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccC
Q 003847 549 IYDFVPNGSLANARYRKMG-SSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVT 627 (791)
Q Consensus 549 v~e~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~ 627 (791)
+|||+++|+|.+++..... .....+++..+..++.|++.||+|||+++|+||||||+|||+++++.+||+|||+++.+.
T Consensus 84 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 163 (272)
T cd05075 84 ILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIY 163 (272)
T ss_pred EEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcccccC
Confidence 9999999999998754321 222348999999999999999999999999999999999999999999999999988654
Q ss_pred CCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh
Q 003847 628 GDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT 707 (791)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt 707 (791)
...... ......+++.|+|||...+..++.++||||||+++|||++
T Consensus 164 ~~~~~~----------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~ 209 (272)
T cd05075 164 NGDYYR----------------------------------QGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIAT 209 (272)
T ss_pred ccccee----------------------------------cCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHc
Confidence 321100 0011235667999999999899999999999999999999
Q ss_pred -CCcchhccccCCCCcchhchhHHHHHHHHhhhcC-ccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 708 -GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRAD-FEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 708 -G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
|+.||...... ++.+....+. ..........+.+++.+||+.||++|||+.++++.|+++
T Consensus 210 ~g~~p~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 210 RGQTPYPGVENS-------------EIYDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCCCCCCCCHH-------------HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 78888542111 1111111111 111122456788999999999999999999999999875
No 148
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.3e-36 Score=319.19 Aligned_cols=254 Identities=22% Similarity=0.429 Sum_probs=200.7
Q ss_pred hcceeccccCceEEEEEEeC-CC---cEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEec
Q 003847 478 ASAYILGASGSSIMYKAVLE-DG---TALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDF 552 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~~-~g---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 552 (791)
...+.||+|+||.||+|+.. ++ ..+|+|.++.. .....+.+.+|++++++++|+||+++++++...+..++||||
T Consensus 8 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (268)
T cd05063 8 TKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEY 87 (268)
T ss_pred eEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEc
Confidence 34678999999999999954 33 37999999765 333456789999999999999999999999999999999999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCC
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 632 (791)
+++++|.+++..... .+++..+..++.|++.||+|||+.|++||||||+||+++.++.+||+|||++.........
T Consensus 88 ~~~~~L~~~~~~~~~----~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~ 163 (268)
T cd05063 88 MENGALDKYLRDHDG----EFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEG 163 (268)
T ss_pred CCCCCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceeccccccc
Confidence 999999999875432 3899999999999999999999999999999999999999999999999998765422111
Q ss_pred CcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcc
Q 003847 633 SKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVI 711 (791)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~p 711 (791)
.. .......+..|+|||++.+..++.++|||||||++|||++ |+.|
T Consensus 164 ~~---------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p 210 (268)
T cd05063 164 TY---------------------------------TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERP 210 (268)
T ss_pred ce---------------------------------eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCC
Confidence 00 0001113456999999988889999999999999999998 9999
Q ss_pred hhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 712 VVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 712 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
|..... . .......... ..+........+.+++.+||+.+|++||++.+|++.|+++
T Consensus 211 ~~~~~~---------~-~~~~~i~~~~--~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 211 YWDMSN---------H-EVMKAINDGF--RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CCcCCH---------H-HHHHHHhcCC--CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 854211 1 1111111111 1112223456789999999999999999999999999876
No 149
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=9.3e-37 Score=324.39 Aligned_cols=257 Identities=27% Similarity=0.347 Sum_probs=201.7
Q ss_pred ceeccccCceEEEEEEeC------CCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEec
Q 003847 480 AYILGASGSSIMYKAVLE------DGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDF 552 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 552 (791)
...||+|+||.||+|... ....+|+|.+.... ....+++.+|+.++++++||||+++++.+...+..++|+||
T Consensus 5 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (290)
T cd05045 5 GKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEY 84 (290)
T ss_pred cccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEe
Confidence 468999999999999842 23679999987653 33456789999999999999999999999999999999999
Q ss_pred cCCCChhHHHHhhcC-------------------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCC
Q 003847 553 VPNGSLANARYRKMG-------------------SSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDM 613 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~-------------------~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~ 613 (791)
+.+++|.+++..... ....++++..+..++.|++.||+|||+.+|+||||||+||++++++
T Consensus 85 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~ 164 (290)
T cd05045 85 AKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGR 164 (290)
T ss_pred cCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCC
Confidence 999999998865321 1112488999999999999999999999999999999999999999
Q ss_pred CeEEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCch
Q 003847 614 EPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKW 693 (791)
Q Consensus 614 ~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~s 693 (791)
.+||+|||+++......... ......++..|+|||.+.+..++.++
T Consensus 165 ~~kl~dfg~~~~~~~~~~~~----------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~ 210 (290)
T cd05045 165 KMKISDFGLSRDVYEEDSYV----------------------------------KRSKGRIPVKWMAIESLFDHIYTTQS 210 (290)
T ss_pred cEEeccccccccccCccchh----------------------------------cccCCCCCccccCHHHHccCCcchHh
Confidence 99999999987653221100 00112356679999999888899999
Q ss_pred hhHHHHHHHHHHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 003847 694 DVYSFGVILLELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKE 772 (791)
Q Consensus 694 DvwSlGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 772 (791)
||||||+++|||++ |+.||..... .............. ........+.+++.+||+.+|++||+++|
T Consensus 211 Di~slG~~l~el~t~g~~p~~~~~~----------~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~ 278 (290)
T cd05045 211 DVWSFGVLLWEIVTLGGNPYPGIAP----------ERLFNLLKTGYRME--RPENCSEEMYNLMLTCWKQEPDKRPTFAD 278 (290)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCCH----------HHHHHHHhCCCCCC--CCCCCCHHHHHHHHHHccCCcccCCCHHH
Confidence 99999999999999 8888854311 11122222111111 12224567889999999999999999999
Q ss_pred HHHHhccCCC
Q 003847 773 ALQALEKIPS 782 (791)
Q Consensus 773 vl~~L~~i~~ 782 (791)
+++.|+++-.
T Consensus 279 i~~~l~~~~~ 288 (290)
T cd05045 279 ISKELEKMMV 288 (290)
T ss_pred HHHHHHHHHh
Confidence 9999998754
No 150
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.1e-37 Score=344.08 Aligned_cols=282 Identities=15% Similarity=0.171 Sum_probs=196.7
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
...||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++|+||+++++.+.+++..|+||||+++
T Consensus 6 ~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~ 85 (376)
T cd05598 6 IKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPG 85 (376)
T ss_pred EEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCC
Confidence 46899999999999994 568999999986532 22345688999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|+|.+++.... .+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||++..+.........
T Consensus 86 g~L~~~i~~~~-----~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~ 160 (376)
T cd05598 86 GDMMSLLIRLG-----IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY 160 (376)
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccccc
Confidence 99999987643 3889999999999999999999999999999999999999999999999998644311110000
Q ss_pred CCCccccCCcc-ccccccccc-----CCC-CCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhC
Q 003847 636 GGSARNFGSKR-STASRDSFQ-----DLG-PGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTG 708 (791)
Q Consensus 636 ~~~~~~~~~~~-~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG 708 (791)
........... ......... ... ..............+||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G 240 (376)
T cd05598 161 QKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 240 (376)
T ss_pred ccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhC
Confidence 00000000000 000000000 000 00000001112346799999999999999999999999999999999999
Q ss_pred CcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCC---CHHHHHHH
Q 003847 709 KVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRP---SMKEALQA 776 (791)
Q Consensus 709 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP---s~~evl~~ 776 (791)
+.||...... .....+.........+........+.+++.+|+ .+|.+|+ ++.|+++.
T Consensus 241 ~~Pf~~~~~~---------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 241 QPPFLADTPA---------ETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred CCCCCCCCHH---------HHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 9999654211 000111110000011111123456778888876 5999999 88998865
No 151
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.8e-36 Score=316.75 Aligned_cols=248 Identities=23% Similarity=0.338 Sum_probs=197.5
Q ss_pred ceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCChh
Q 003847 480 AYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLA 559 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 559 (791)
...||+|++|.||++....+..||+|.+..... ..+.+.+|++++++++|+|++++++++. .+..++||||+++++|.
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~ 88 (260)
T cd05069 11 DVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM-MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGKGSLL 88 (260)
T ss_pred eeeecCcCCCeEEEEEEcCCceEEEEEcccCCc-cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCCCCHH
Confidence 457999999999999987777899999875433 2467889999999999999999999875 46689999999999999
Q ss_pred HHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCCc
Q 003847 560 NARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639 (791)
Q Consensus 560 ~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~ 639 (791)
+++..... ..+++..+..++.|++.||+|||+.|++||||||+||++++++.++|+|||++..........
T Consensus 89 ~~~~~~~~---~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~------ 159 (260)
T cd05069 89 DFLKEGDG---KYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTA------ 159 (260)
T ss_pred HHHhhCCC---CCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcccc------
Confidence 99876432 238899999999999999999999999999999999999999999999999997654221100
Q ss_pred cccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhccccC
Q 003847 640 RNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDELGQ 718 (791)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~ 718 (791)
.....++..|+|||...+..++.++||||||+++|||++ |+.||.+....
T Consensus 160 -----------------------------~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 210 (260)
T cd05069 160 -----------------------------RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR 210 (260)
T ss_pred -----------------------------cCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 011225677999999988889999999999999999999 88888653211
Q ss_pred CCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhcc
Q 003847 719 GNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 779 (791)
...+...... ........+..+.+++.+||+.||++||+++++++.|++
T Consensus 211 ----------~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 211 ----------EVLEQVERGY--RMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred ----------HHHHHHHcCC--CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 0111111111 111122355778999999999999999999999999986
No 152
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.1e-36 Score=322.19 Aligned_cols=254 Identities=24% Similarity=0.356 Sum_probs=201.1
Q ss_pred ceeccccCceEEEEEEe------CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEecc
Q 003847 480 AYILGASGSSIMYKAVL------EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
...||+|+||.||++.. .++..+|+|.+........+.+.+|++++++++|+||+++++++...+..+++|||+
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 89 (280)
T cd05092 10 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYM 89 (280)
T ss_pred ccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEecC
Confidence 56899999999999963 246789999998776666778999999999999999999999999999999999999
Q ss_pred CCCChhHHHHhhcCC----------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcc
Q 003847 554 PNGSLANARYRKMGS----------SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLE 623 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~----------~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla 623 (791)
++++|.+++...... ....+++..++.++.|++.||+|||+.||+||||||+||++++++.+||+|||++
T Consensus 90 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~ 169 (280)
T cd05092 90 RHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMS 169 (280)
T ss_pred CCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEECCCCce
Confidence 999999998764321 1124889999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHH
Q 003847 624 RLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILL 703 (791)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ 703 (791)
+......... ......+++.|+|||.+.+..++.++|||||||++|
T Consensus 170 ~~~~~~~~~~----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 215 (280)
T cd05092 170 RDIYSTDYYR----------------------------------VGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLW 215 (280)
T ss_pred eEcCCCceee----------------------------------cCCCccccccccCHHHhccCCcCchhhHHHHHHHHH
Confidence 7653211100 001122567799999999889999999999999999
Q ss_pred HHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhcc
Q 003847 704 ELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779 (791)
Q Consensus 704 ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 779 (791)
||++ |+.||..... ... ........ ........+..+.+++.+||+.||.+||+++||++.|++
T Consensus 216 el~~~g~~p~~~~~~---------~~~-~~~~~~~~--~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 216 EIFTYGKQPWYQLSN---------TEA-IECITQGR--ELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HHHcCCCCCCccCCH---------HHH-HHHHHcCc--cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 9998 8888854211 011 11111110 111112245678899999999999999999999999864
No 153
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1.6e-36 Score=317.51 Aligned_cols=250 Identities=24% Similarity=0.352 Sum_probs=198.2
Q ss_pred cceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 479 SAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
....||+|+||.||+|+..++..||+|++..... ..+.+.+|++++++++|+||+++++++. .+..++||||+++|+|
T Consensus 10 ~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L 87 (262)
T cd05071 10 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSL 87 (262)
T ss_pred EeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCCCCcH
Confidence 3467999999999999977777899999976433 2367899999999999999999999874 4568999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++...... .+++..+..++.|++.||+|||+.+|+||||||+||++++++.+||+|||.++.+.......
T Consensus 88 ~~~~~~~~~~---~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~----- 159 (262)
T cd05071 88 LDFLKGEMGK---YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA----- 159 (262)
T ss_pred HHHHhhcccc---CCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecccccccc-----
Confidence 9998764322 38899999999999999999999999999999999999999999999999997664321100
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhcccc
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDELG 717 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~ 717 (791)
.....++..|+|||+..+..++.++||||||+++|||+| |+.||.....
T Consensus 160 ------------------------------~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~ 209 (262)
T cd05071 160 ------------------------------RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 209 (262)
T ss_pred ------------------------------ccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCh
Confidence 011225677999999988889999999999999999999 7778754311
Q ss_pred CCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 718 QGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
. .......... ........+..+.+++.+|++.||++||++.++++.|++.
T Consensus 210 ~----------~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 210 R----------EVLDQVERGY--RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred H----------HHHHHHhcCC--CCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 1 1111111110 1112233567789999999999999999999999999864
No 154
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.5e-36 Score=317.27 Aligned_cols=249 Identities=24% Similarity=0.393 Sum_probs=199.0
Q ss_pred ceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCChh
Q 003847 480 AYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLA 559 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 559 (791)
...||+|+||.||+|..++++.||+|.+...... .+.+.+|+.++++++|+||+++++++ ..+..+++|||+++++|.
T Consensus 11 ~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e~~~~~~L~ 88 (260)
T cd05067 11 VKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMS-PEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITEYMENGSLV 88 (260)
T ss_pred eeeeccCccceEEeeecCCCceEEEEEecCCCCc-HHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEEcCCCCCHH
Confidence 4689999999999999888999999999765432 46789999999999999999999987 456789999999999999
Q ss_pred HHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCCc
Q 003847 560 NARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639 (791)
Q Consensus 560 ~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~ 639 (791)
+++...... .+++.++..++.|++.||+|||+.|++||||||+||+++.++.++|+|||++..........
T Consensus 89 ~~~~~~~~~---~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~------ 159 (260)
T cd05067 89 DFLKTPEGI---KLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTA------ 159 (260)
T ss_pred HHHHhcCCC---CCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCccc------
Confidence 988764432 48999999999999999999999999999999999999999999999999987654211100
Q ss_pred cccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhccccC
Q 003847 640 RNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDELGQ 718 (791)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~ 718 (791)
.....++..|+|||++.+..++.++||||||+++|||++ |+.||.+....
T Consensus 160 -----------------------------~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~ 210 (260)
T cd05067 160 -----------------------------REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP 210 (260)
T ss_pred -----------------------------ccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH
Confidence 011225667999999998889999999999999999999 99998643211
Q ss_pred CCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 719 GNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
........... .+.....+.++.+++.+|++.+|++||+++++++.|+.+
T Consensus 211 ----------~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 260 (260)
T cd05067 211 ----------EVIQNLERGYR--MPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLEDF 260 (260)
T ss_pred ----------HHHHHHHcCCC--CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhcC
Confidence 01111111111 111122446789999999999999999999999999753
No 155
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=7.3e-37 Score=322.28 Aligned_cols=239 Identities=23% Similarity=0.333 Sum_probs=187.7
Q ss_pred eccccCceEEEEEEeCC-------------------------CcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccce
Q 003847 482 ILGASGSSIMYKAVLED-------------------------GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRI 536 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~~~~-------------------------g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l 536 (791)
.||+|+||.||+|.... ...||+|++..........+.+|+.++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 58999999999997421 24699999976655555678889999999999999999
Q ss_pred eeEEEccCceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCC---
Q 003847 537 RGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDM--- 613 (791)
Q Consensus 537 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~--- 613 (791)
++++......++||||+++|+|..++..... .+++..+..++.|+++||+|||+++|+||||||+||+++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKG----RVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCccc
Confidence 9999999999999999999999988865432 389999999999999999999999999999999999997643
Q ss_pred ----CeEEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CC
Q 003847 614 ----EPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IK 688 (791)
Q Consensus 614 ----~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~ 688 (791)
.+|++|||++...... ....++..|+|||.+.+ ..
T Consensus 158 ~~~~~~kl~d~g~~~~~~~~----------------------------------------~~~~~~~~~~aPe~~~~~~~ 197 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALSR----------------------------------------EERVERIPWIAPECVPGGNS 197 (274)
T ss_pred CccceeeecCCccccccccc----------------------------------------cccccCCcccCchhhcCCCC
Confidence 3799999987543211 01136777999998865 56
Q ss_pred CCCchhhHHHHHHHHHHH-hCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCC
Q 003847 689 PNPKWDVYSFGVILLELL-TGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKR 767 (791)
Q Consensus 689 ~~~~sDvwSlGvil~ell-tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 767 (791)
++.++|||||||++|||+ +|+.||...... .......... ..+ ......+.+++.+||+.+|++|
T Consensus 198 ~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~----------~~~~~~~~~~--~~~--~~~~~~~~~li~~cl~~~p~~R 263 (274)
T cd05076 198 LSTAADKWSFGTTLLEICFDGEVPLKERTPS----------EKERFYEKKH--RLP--EPSCKELATLISQCLTYEPTQR 263 (274)
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCccccChH----------HHHHHHHhcc--CCC--CCCChHHHHHHHHHcccChhhC
Confidence 899999999999999995 688888543211 0111111111 111 1123468899999999999999
Q ss_pred CCHHHHHHHhc
Q 003847 768 PSMKEALQALE 778 (791)
Q Consensus 768 Ps~~evl~~L~ 778 (791)
|++.++++.|.
T Consensus 264 ps~~~il~~L~ 274 (274)
T cd05076 264 PSFRTILRDLT 274 (274)
T ss_pred cCHHHHHHhhC
Confidence 99999999874
No 156
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.4e-36 Score=316.81 Aligned_cols=251 Identities=25% Similarity=0.390 Sum_probs=200.0
Q ss_pred eeccccCceEEEEEEeCC--C--cEEEEEEcCCCch-hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 481 YILGASGSSIMYKAVLED--G--TALAVRRIGENSV-DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~--g--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
++||+|++|.||+|...+ + ..||||.+..... ...+.+.+|++++++++|+||+++++++.. ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 368999999999998543 3 3699999987655 566789999999999999999999999988 889999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
++|.+++..... ..+++..+..++.|++.||+|||+.|++||||||+||+++.++.+||+|||+++.+........
T Consensus 80 ~~L~~~l~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~- 155 (257)
T cd05040 80 GSLLDRLRKDAL---GHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYV- 155 (257)
T ss_pred CcHHHHHHhccc---ccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEecccccccccccccccee-
Confidence 999999877542 2489999999999999999999999999999999999999999999999999987643221100
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVD 714 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~ 714 (791)
......++..|+|||++.+..++.++|||||||++|||++ |+.||..
T Consensus 156 --------------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 203 (257)
T cd05040 156 --------------------------------MEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAG 203 (257)
T ss_pred --------------------------------cccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 0012336778999999998899999999999999999999 9999853
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhcc
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 779 (791)
.... . ....... ...........+..+.+++.+|++.+|++||++.|+++.|.+
T Consensus 204 ~~~~---------~-~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 257 (257)
T cd05040 204 LSGS---------Q-ILKKIDK-EGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLPE 257 (257)
T ss_pred CCHH---------H-HHHHHHh-cCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhcC
Confidence 2110 0 1111111 011111122245678899999999999999999999998863
No 157
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.5e-36 Score=325.10 Aligned_cols=262 Identities=21% Similarity=0.312 Sum_probs=203.2
Q ss_pred hhhcceeccccCceEEEEEEe--------CCCcEEEEEEcCCC-chhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCc
Q 003847 476 LKASAYILGASGSSIMYKAVL--------EDGTALAVRRIGEN-SVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDE 545 (791)
Q Consensus 476 ~~~~~~~lG~G~~g~Vy~~~~--------~~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 545 (791)
.+.....||+|+||.||+|+. .++..||+|.+... .....+.+.+|+.+++.+ +||||+++++++.....
T Consensus 16 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 95 (304)
T cd05101 16 KLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 95 (304)
T ss_pred HeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCc
Confidence 334557899999999999973 13458999998754 234457789999999999 89999999999999999
Q ss_pred eEEEEeccCCCChhHHHHhhcCC-----------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCC
Q 003847 546 KLIIYDFVPNGSLANARYRKMGS-----------SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDME 614 (791)
Q Consensus 546 ~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~ 614 (791)
.++||||+++|+|.+++...... ....+++.++..++.||+.||+|||+.||+||||||+||+++.++.
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~~~ 175 (304)
T cd05101 96 LYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNV 175 (304)
T ss_pred eEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCCCc
Confidence 99999999999999999764321 1124888999999999999999999999999999999999999999
Q ss_pred eEEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchh
Q 003847 615 PKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWD 694 (791)
Q Consensus 615 ~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sD 694 (791)
+||+|||+++......... ......++..|+|||++.+..++.++|
T Consensus 176 ~kl~D~g~~~~~~~~~~~~----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~D 221 (304)
T cd05101 176 MKIADFGLARDVNNIDYYK----------------------------------KTTNGRLPVKWMAPEALFDRVYTHQSD 221 (304)
T ss_pred EEECCCccceecccccccc----------------------------------cccCCCCCceeeCchhhccCCCCchhh
Confidence 9999999998664321110 001123567799999999888999999
Q ss_pred hHHHHHHHHHHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 003847 695 VYSFGVILLELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEA 773 (791)
Q Consensus 695 vwSlGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 773 (791)
|||||+++|||++ |..||..... ............ .......+..+.+++.+||..+|++||++.|+
T Consensus 222 i~slG~~l~el~~~g~~p~~~~~~----------~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~ 289 (304)
T cd05101 222 VWSFGVLMWEIFTLGGSPYPGIPV----------EELFKLLKEGHR--MDKPANCTNELYMMMRDCWHAIPSHRPTFKQL 289 (304)
T ss_pred HHHHHHHHHHHHcCCCCCcccCCH----------HHHHHHHHcCCc--CCCCCCCCHHHHHHHHHHcccChhhCCCHHHH
Confidence 9999999999998 6777743211 011111111111 11112245678899999999999999999999
Q ss_pred HHHhccCCCC
Q 003847 774 LQALEKIPSS 783 (791)
Q Consensus 774 l~~L~~i~~~ 783 (791)
++.|++|...
T Consensus 290 l~~l~~~~~~ 299 (304)
T cd05101 290 VEDLDRILTL 299 (304)
T ss_pred HHHHHHHHHh
Confidence 9999887543
No 158
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.1e-36 Score=326.55 Aligned_cols=260 Identities=23% Similarity=0.315 Sum_probs=201.6
Q ss_pred hhcceeccccCceEEEEEEeC--------CCcEEEEEEcCCC-chhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCce
Q 003847 477 KASAYILGASGSSIMYKAVLE--------DGTALAVRRIGEN-SVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEK 546 (791)
Q Consensus 477 ~~~~~~lG~G~~g~Vy~~~~~--------~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~ 546 (791)
+...+.||+|+||.||+++.. ++..+|+|.++.. ......++..|+++++++ +|+||+++++++...+..
T Consensus 20 ~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 99 (307)
T cd05098 20 LVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL 99 (307)
T ss_pred eEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCce
Confidence 344578999999999999742 2357999999764 233456788899999999 799999999999999999
Q ss_pred EEEEeccCCCChhHHHHhhcCC-----------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCe
Q 003847 547 LIIYDFVPNGSLANARYRKMGS-----------SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP 615 (791)
Q Consensus 547 ~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~ 615 (791)
++||||+++|+|.+++...... ....+++.+++.++.|++.||+|||+.|++||||||+||+++.++.+
T Consensus 100 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~ 179 (307)
T cd05098 100 YVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVM 179 (307)
T ss_pred EEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCCCcE
Confidence 9999999999999999765321 11248999999999999999999999999999999999999999999
Q ss_pred EEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhh
Q 003847 616 KIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDV 695 (791)
Q Consensus 616 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDv 695 (791)
||+|||+++.......... .....++..|+|||++.+..++.++||
T Consensus 180 kL~dfg~a~~~~~~~~~~~----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv 225 (307)
T cd05098 180 KIADFGLARDIHHIDYYKK----------------------------------TTNGRLPVKWMAPEALFDRIYTHQSDV 225 (307)
T ss_pred EECCCcccccccccchhhc----------------------------------cccCCCccceeChHHhccCCCCcHHHH
Confidence 9999999876532111000 001124567999999998889999999
Q ss_pred HHHHHHHHHHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 003847 696 YSFGVILLELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEAL 774 (791)
Q Consensus 696 wSlGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 774 (791)
|||||++|||++ |+.||..... ............ .+........+.+++.+||..+|++||++.+++
T Consensus 226 wslG~~l~el~~~g~~p~~~~~~----------~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl 293 (307)
T cd05098 226 WSFGVLLWEIFTLGGSPYPGVPV----------EELFKLLKEGHR--MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 293 (307)
T ss_pred HHHHHHHHHHHcCCCCCCCcCCH----------HHHHHHHHcCCC--CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHH
Confidence 999999999998 7778753210 111111111111 112222456788999999999999999999999
Q ss_pred HHhccCCC
Q 003847 775 QALEKIPS 782 (791)
Q Consensus 775 ~~L~~i~~ 782 (791)
+.|+++..
T Consensus 294 ~~l~~~~~ 301 (307)
T cd05098 294 EDLDRILA 301 (307)
T ss_pred HHHHHHHH
Confidence 99988743
No 159
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.3e-36 Score=319.08 Aligned_cols=254 Identities=22% Similarity=0.339 Sum_probs=202.8
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCC---chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGEN---SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
.+.||+|++|.||++. ..+++.||||.+... ......++.+|+++++.++|+||+++++++..++..+++|||+++
T Consensus 7 ~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~ 86 (267)
T cd08229 7 EKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADA 86 (267)
T ss_pred hhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecCC
Confidence 4579999999999999 457999999988643 223346788999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
++|.+++...... ...+++..++.++.|++.||+|||+.|++|+||||+||+++.++.++|+|||++........
T Consensus 87 ~~L~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~---- 161 (267)
T cd08229 87 GDLSRMIKHFKKQ-KRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT---- 161 (267)
T ss_pred CCHHHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCc----
Confidence 9999988753321 12489999999999999999999999999999999999999999999999999876532111
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
......|+..|+|||.+.+..++.++||||||+++|||++|..||...
T Consensus 162 --------------------------------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 209 (267)
T cd08229 162 --------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 209 (267)
T ss_pred --------------------------------ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 011234788899999998888999999999999999999999998643
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCcc--chHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFE--GKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
... .............+ ........+.+++.+||+.||++|||+.+|+++++++.
T Consensus 210 ~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 210 KMN-----------LYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred cch-----------HHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 211 01111111111111 11224567899999999999999999999999998764
No 160
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.6e-36 Score=316.08 Aligned_cols=245 Identities=25% Similarity=0.316 Sum_probs=199.9
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
.+.||+|++|.||++.. .+++.|++|.+... .....+.+.+|++++++++||||+++++++.+.+..++||||++++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (256)
T cd08529 5 LNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENG 84 (256)
T ss_pred eEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCC
Confidence 46899999999999995 46899999998643 3344577899999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++...... .+++..+..++.|++.||.|||+.||+|+||||+||+++.++.+||+|||+++.+......
T Consensus 85 ~L~~~l~~~~~~---~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~---- 157 (256)
T cd08529 85 DLHKLLKMQRGR---PLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNF---- 157 (256)
T ss_pred cHHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccch----
Confidence 999998865322 4899999999999999999999999999999999999999999999999998865432110
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
.....|++.|+|||+..+..++.++|+||||+++|||++|+.||....
T Consensus 158 --------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 205 (256)
T cd08529 158 --------------------------------ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN 205 (256)
T ss_pred --------------------------------hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC
Confidence 112347888999999998889999999999999999999999985432
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCcc-chHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFE-GKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
. ............+ ........+.+++.+||+.+|++||++.++++.
T Consensus 206 ~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 206 Q-------------GALILKIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred H-------------HHHHHHHHcCCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 1 1111111111111 111355678999999999999999999999864
No 161
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.7e-36 Score=326.70 Aligned_cols=200 Identities=22% Similarity=0.339 Sum_probs=160.6
Q ss_pred ceeccccCceEEEEEEeC---CCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEc--cCceEEEEeccC
Q 003847 480 AYILGASGSSIMYKAVLE---DGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG--VDEKLIIYDFVP 554 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--~~~~~lv~e~~~ 554 (791)
+..||+|+||.||+|+.. ++..||+|.+..... ...+.+|++++++++||||+++++++.. +...++||||++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI--SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC--cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 458999999999999954 457899999876532 2467889999999999999999998854 456789999996
Q ss_pred CCChhHHHHhhcC----CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEe----cCCCCeEEeccCccccc
Q 003847 555 NGSLANARYRKMG----SSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLL----GNDMEPKIGDFGLERLV 626 (791)
Q Consensus 555 ~gsL~~~l~~~~~----~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl----~~~~~~kL~DFGla~~~ 626 (791)
++|.+++..... .....+++..++.++.||+.||+|||+.+|+||||||+|||+ +.++.+||+|||+++..
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~ 162 (317)
T cd07867 84 -HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 162 (317)
T ss_pred -CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceecc
Confidence 578777653321 112348899999999999999999999999999999999999 56678999999999866
Q ss_pred CCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHH
Q 003847 627 TGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLEL 705 (791)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~el 705 (791)
....... .......||+.|+|||++.+ ..++.++|||||||++|||
T Consensus 163 ~~~~~~~---------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el 209 (317)
T cd07867 163 NSPLKPL---------------------------------ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAEL 209 (317)
T ss_pred CCCcccc---------------------------------cccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHH
Confidence 4321100 01123458999999999876 4579999999999999999
Q ss_pred HhCCcchhcc
Q 003847 706 LTGKVIVVDE 715 (791)
Q Consensus 706 ltG~~pf~~~ 715 (791)
+||++||...
T Consensus 210 ~tg~~~f~~~ 219 (317)
T cd07867 210 LTSEPIFHCR 219 (317)
T ss_pred HhCCCCcccc
Confidence 9999998643
No 162
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.3e-36 Score=324.17 Aligned_cols=245 Identities=23% Similarity=0.339 Sum_probs=198.9
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
...||+|++|.||++.. .+++.||+|.+........+.+.+|+.+++.++|+||+++++++......++||||+++++|
T Consensus 25 ~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L 104 (296)
T cd06654 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104 (296)
T ss_pred EEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCH
Confidence 35799999999999984 57899999999876555567889999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++... .+++.++..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++.........
T Consensus 105 ~~~~~~~------~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~------ 172 (296)
T cd06654 105 TDVVTET------CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK------ 172 (296)
T ss_pred HHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccccc------
Confidence 9988643 2789999999999999999999999999999999999999999999999998764321110
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccccC
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQ 718 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~ 718 (791)
.....|++.|+|||.+.+..++.++|||||||++|+|++|+.||......
T Consensus 173 ------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~ 222 (296)
T cd06654 173 ------------------------------RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL 222 (296)
T ss_pred ------------------------------cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 11234788999999999888999999999999999999999999654221
Q ss_pred CCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 719 GNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
. ...... ................+.+++.+||..+|++||++.|+++.
T Consensus 223 ~---------~~~~~~-~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 223 R---------ALYLIA-TNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred H---------hHHHHh-cCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 0 000000 00011111222345678899999999999999999999974
No 163
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=2.7e-36 Score=316.45 Aligned_cols=254 Identities=23% Similarity=0.347 Sum_probs=204.0
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCC---chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGEN---SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
.+.||+|++|.||+|... +|+.||+|.++.. .....+.+.+|++++++++|+||+++++++...+..++||||+++
T Consensus 7 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (267)
T cd08224 7 EKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADA 86 (267)
T ss_pred eeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCCC
Confidence 468999999999999965 7999999988642 223356789999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
++|.+++...... ...+++..+..++.|++.||+|||+.||+||||||+||+++.++.++|+|||++.........
T Consensus 87 ~~L~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~--- 162 (267)
T cd08224 87 GDLSRMIKHFKKQ-KRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTA--- 162 (267)
T ss_pred CCHHHHHHHhccc-CCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCcc---
Confidence 9999988653321 124899999999999999999999999999999999999999999999999998765322110
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
.....|+..|+|||.+.+..++.++|||||||++|+|++|+.||...
T Consensus 163 ---------------------------------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 209 (267)
T cd08224 163 ---------------------------------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 209 (267)
T ss_pred ---------------------------------cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccC
Confidence 11234788899999999888999999999999999999999998543
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCcc-c-hHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFE-G-KEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
... ..+..+....+... . .......+.+++.+||..+|++||++.+|+++|+++.
T Consensus 210 ~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 210 KMN-----------LYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred Ccc-----------HHHHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 211 11111111111111 1 1134567889999999999999999999999999875
No 164
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-38 Score=332.02 Aligned_cols=245 Identities=21% Similarity=0.291 Sum_probs=203.8
Q ss_pred eccccCceEEEEEEeC-CCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCChhH
Q 003847 482 ILGASGSSIMYKAVLE-DGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN 560 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~ 560 (791)
-||.|+||.||+|..+ ++...|.|+|...+....++|.-|++||..++||+||++++.|+..+..+|+.|||.||-+..
T Consensus 39 ELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVDa 118 (1187)
T KOG0579|consen 39 ELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVDA 118 (1187)
T ss_pred hhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHhH
Confidence 3799999999999954 566677899988888888999999999999999999999999999999999999999999998
Q ss_pred HHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCCcc
Q 003847 561 ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSAR 640 (791)
Q Consensus 561 ~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~ 640 (791)
++-.-.. .+.+.++..+++|++.||.|||+++|||||||..|||++-+|.++|+|||.+......
T Consensus 119 imlEL~r----~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t----------- 183 (1187)
T KOG0579|consen 119 IMLELGR----VLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKST----------- 183 (1187)
T ss_pred HHHHhcc----ccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhH-----------
Confidence 8776554 4999999999999999999999999999999999999999999999999997654321
Q ss_pred ccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccc-----cCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 641 NFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESL-----RSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~-----~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
.....++.|||+|||||+. +..+|+.++||||||++|.||..+.+|..+-
T Consensus 184 -------------------------~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhel 238 (1187)
T KOG0579|consen 184 -------------------------RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHEL 238 (1187)
T ss_pred -------------------------HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCcccc
Confidence 1123456799999999987 4688999999999999999999999997653
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
. .++.+..+.... .+..-.+......+.+|+.+||..||..||++.++++.
T Consensus 239 n---------pMRVllKiaKSe-PPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 239 N---------PMRVLLKIAKSE-PPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred c---------hHHHHHHHhhcC-CCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 2 122222222211 22223344467789999999999999999999999864
No 165
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.6e-36 Score=317.26 Aligned_cols=250 Identities=24% Similarity=0.374 Sum_probs=200.7
Q ss_pred cceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 479 SAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
....||+|+||.||+|..++++.||||.+..... ..+++.+|+.++++++|+||+++++++......++||||+++++|
T Consensus 10 i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 88 (261)
T cd05034 10 LERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM-SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSL 88 (261)
T ss_pred eeeeeccCcceEEEEEEEcCCceEEEEEecCCcc-CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCCCH
Confidence 3468999999999999988889999999976543 346789999999999999999999999998999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++...... .+++..+..++.|++.||+|||+++++|+||||+||+++.++.+||+|||++..........
T Consensus 89 ~~~i~~~~~~---~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~----- 160 (261)
T cd05034 89 LDFLKSGEGK---KLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTA----- 160 (261)
T ss_pred HHHHhccccC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhhhh-----
Confidence 9998765422 38999999999999999999999999999999999999999999999999988654311100
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhcccc
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDELG 717 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~ 717 (791)
.....++..|+|||.+.+..++.++||||||+++|||++ |+.||.....
T Consensus 161 ------------------------------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~ 210 (261)
T cd05034 161 ------------------------------REGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN 210 (261)
T ss_pred ------------------------------hhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 001113457999999998889999999999999999999 8889854311
Q ss_pred CCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhcc
Q 003847 718 QGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779 (791)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 779 (791)
......+ ..... .......+..+.+++.+|+..+|++||+++++.+.|+.
T Consensus 211 ---------~~~~~~~-~~~~~--~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 211 ---------REVLEQV-ERGYR--MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred ---------HHHHHHH-HcCCC--CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 1111111 11111 11112235678899999999999999999999999975
No 166
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-37 Score=328.34 Aligned_cols=241 Identities=23% Similarity=0.369 Sum_probs=200.3
Q ss_pred eeccccCceEEEEEE-eCCCcEEEEEEcCC---CchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 481 YILGASGSSIMYKAV-LEDGTALAVRRIGE---NSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
.-||.|+||.||-|+ ..+.+.||||++.. .+.+.+.++..|++.|++++|||++.+.|+|..+...|+||||| -|
T Consensus 32 rEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYC-lG 110 (948)
T KOG0577|consen 32 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYC-LG 110 (948)
T ss_pred HHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHH-hc
Confidence 459999999999999 56789999999964 35566788999999999999999999999999999999999999 46
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+-.|++.-... ++.+.++..|+.+.+.||+|||+.+.||||||..|||+++.|.|||+|||.|....+
T Consensus 111 SAsDlleVhkK----plqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P-------- 178 (948)
T KOG0577|consen 111 SASDLLEVHKK----PLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP-------- 178 (948)
T ss_pred cHHHHHHHHhc----cchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCc--------
Confidence 88887765542 488999999999999999999999999999999999999999999999999886542
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc---CCCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR---SIKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~---~~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
..+++|||+|||||++. .+.|+-|+||||||++..||.-.++|+.
T Consensus 179 --------------------------------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlF 226 (948)
T KOG0577|consen 179 --------------------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 226 (948)
T ss_pred --------------------------------hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCcc
Confidence 23567999999999985 4789999999999999999999999864
Q ss_pred ccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHh
Q 003847 714 DELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQAL 777 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 777 (791)
.-. .+..++.+.... .+... ..+.+..+.+|+..||..-|.+|||.+++++.-
T Consensus 227 nMN---------AMSALYHIAQNe-sPtLq-s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~ 279 (948)
T KOG0577|consen 227 NMN---------AMSALYHIAQNE-SPTLQ-SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHR 279 (948)
T ss_pred Cch---------HHHHHHHHHhcC-CCCCC-CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcc
Confidence 321 111222222211 11222 234678889999999999999999999998753
No 167
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=2e-36 Score=315.55 Aligned_cols=245 Identities=24% Similarity=0.345 Sum_probs=195.3
Q ss_pred cceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEE-ccCceEEEEeccCCCC
Q 003847 479 SAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW-GVDEKLIIYDFVPNGS 557 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~-~~~~~~lv~e~~~~gs 557 (791)
..+.||+|+||.||++... |+.||+|.+..... .+.+.+|+.++++++|+|++++++++. ..+..++||||+++++
T Consensus 10 ~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~ 86 (256)
T cd05082 10 LLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 86 (256)
T ss_pred eeeeecccCCCeEEEEEEc-CCcEEEEEeCCCch--HHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCc
Confidence 3468999999999999864 78899999875432 467889999999999999999999765 4567899999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++...... .+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++.......
T Consensus 87 L~~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~------ 157 (256)
T cd05082 87 LVDYLRSRGRS---VLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD------ 157 (256)
T ss_pred HHHHHHhcCCC---CCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccCC------
Confidence 99998765432 388999999999999999999999999999999999999999999999999875432110
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDEL 716 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~ 716 (791)
...++..|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 158 ---------------------------------~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~ 204 (256)
T cd05082 158 ---------------------------------TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 204 (256)
T ss_pred ---------------------------------CCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC
Confidence 1124556999999998889999999999999999998 888885321
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
. ............. ......+..+.+++.+|++.+|++|||+.++++.|++|
T Consensus 205 ~----------~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 205 L----------KDVVPRVEKGYKM--DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred H----------HHHHHHHhcCCCC--CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 1 0111111111111 11122456788999999999999999999999999875
No 168
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.8e-36 Score=318.65 Aligned_cols=252 Identities=27% Similarity=0.380 Sum_probs=196.3
Q ss_pred eeccccCceEEEEEEeC-CCc--EEEEEEcCCC-chhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEeccCC
Q 003847 481 YILGASGSSIMYKAVLE-DGT--ALAVRRIGEN-SVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~-~g~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
++||+|+||.||+|..+ ++. .+|+|.++.. .....+.+.+|+++++++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 36899999999999964 343 5789988754 334456788999999999 799999999999999999999999999
Q ss_pred CChhHHHHhhcCC-----------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCccc
Q 003847 556 GSLANARYRKMGS-----------SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624 (791)
Q Consensus 556 gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~ 624 (791)
|+|.+++...... ....+++.++..++.|++.||+|||+.|++||||||+||++++++.+||+|||++.
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~ 160 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR 160 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCcc
Confidence 9999998764321 11248899999999999999999999999999999999999999999999999975
Q ss_pred ccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHH
Q 003847 625 LVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLE 704 (791)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~e 704 (791)
....... ......+..|+|||++....++.++|||||||++||
T Consensus 161 ~~~~~~~-------------------------------------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~e 203 (270)
T cd05047 161 GQEVYVK-------------------------------------KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 203 (270)
T ss_pred ccchhhh-------------------------------------ccCCCCccccCChHHHccCCCCchhhHHHHHHHHHH
Confidence 3211000 001123566999999988889999999999999999
Q ss_pred HHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 705 LLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 705 llt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
|++ |+.||...... ........... .+........+.+++.+||+.+|.+|||+.|+++.|++|.
T Consensus 204 l~~~g~~pf~~~~~~----------~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 204 IVSLGGTPYCGMTCA----------ELYEKLPQGYR--LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred HHcCCCCCccccCHH----------HHHHHHhCCCC--CCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 997 99998543110 11111111111 1111223457889999999999999999999999998763
No 169
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=8.4e-37 Score=320.53 Aligned_cols=248 Identities=22% Similarity=0.287 Sum_probs=196.3
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
...||+|+||.||+|+. .+++.||+|++..........+++|+.++++++||||+++++++..++..++||||+++++|
T Consensus 14 ~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L 93 (267)
T cd06646 14 IQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSL 93 (267)
T ss_pred hheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCcH
Confidence 45799999999999994 57899999999765544556788999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++.... .+++..+..++.|++.||+|||+.+|+||||||+||+++.++.+||+|||++..+.....
T Consensus 94 ~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~------- 161 (267)
T cd06646 94 QDIYHVTG-----PLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA------- 161 (267)
T ss_pred HHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeeccccc-------
Confidence 99886543 389999999999999999999999999999999999999999999999999986532110
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc---CCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR---SIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~---~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
......|+..|+|||.+. ...++.++|||||||++|||++|+.||...
T Consensus 162 -----------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~ 212 (267)
T cd06646 162 -----------------------------KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDL 212 (267)
T ss_pred -----------------------------ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCcccc
Confidence 011234788899999884 445788999999999999999999998543
Q ss_pred ccCCCCcchhchhHHHHHHHHhhh-cCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHh
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIR-ADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQAL 777 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 777 (791)
........+. ..... .........+..+.+++.+||..+|++||+++++++.|
T Consensus 213 ~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 213 HPMRALFLMS---------KSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred chhhhheeee---------cCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 2111000000 00000 00111112346788999999999999999999998754
No 170
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=2.2e-36 Score=318.20 Aligned_cols=254 Identities=24% Similarity=0.379 Sum_probs=198.7
Q ss_pred ceeccccCceEEEEEEeC-C---CcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccCc------eE
Q 003847 480 AYILGASGSSIMYKAVLE-D---GTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDE------KL 547 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~---g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~------~~ 547 (791)
.+.||+|+||.||+|... + +..||||+++.. .......+.+|+++++.++|+||+++++++...+. .+
T Consensus 4 ~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 83 (273)
T cd05035 4 GKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPM 83 (273)
T ss_pred ccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccE
Confidence 468999999999999853 2 478999998754 23345678999999999999999999998876554 68
Q ss_pred EEEeccCCCChhHHHHhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCccccc
Q 003847 548 IIYDFVPNGSLANARYRKMG-SSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLV 626 (791)
Q Consensus 548 lv~e~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 626 (791)
+||||+++|+|..++..... .....+++..+..++.|++.||+|||+.+|+||||||+||++++++.+||+|||+++..
T Consensus 84 ~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 163 (273)
T cd05035 84 VILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKI 163 (273)
T ss_pred EEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccceeec
Confidence 99999999999998865432 12235899999999999999999999999999999999999999999999999998865
Q ss_pred CCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHH
Q 003847 627 TGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELL 706 (791)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ell 706 (791)
....... ......++..|+|||.+.+..++.++|||||||++|||+
T Consensus 164 ~~~~~~~----------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~ 209 (273)
T cd05035 164 YSGDYYR----------------------------------QGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIA 209 (273)
T ss_pred ccccccc----------------------------------ccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHH
Confidence 4321110 000112456799999998888999999999999999999
Q ss_pred h-CCcchhccccCCCCcchhchhHHHHHHHHhhhc-CccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 707 T-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRA-DFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 707 t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
+ |..||.+... .+..+....+ ........+..+.+++.+||+.||++||++.|+++.|+++
T Consensus 210 ~~g~~p~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 210 TRGQTPYPGVEN-------------HEIYDYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred hCCCCCCCCCCH-------------HHHHHHHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 9 7888854311 1111111111 1111223556889999999999999999999999999875
No 171
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=2.4e-36 Score=318.99 Aligned_cols=254 Identities=23% Similarity=0.340 Sum_probs=198.0
Q ss_pred ceeccccCceEEEEEEeC------CCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEec
Q 003847 480 AYILGASGSSIMYKAVLE------DGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDF 552 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 552 (791)
.+.||+|++|.||+|... .+..||+|.+.... ......+.+|+.++++++|+||+++++++.+.+..++||||
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 90 (277)
T cd05036 11 LRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLEL 90 (277)
T ss_pred eeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEEec
Confidence 468999999999999964 36789999987543 33345789999999999999999999999999999999999
Q ss_pred cCCCChhHHHHhhcCC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCC---CeEEeccCcccccC
Q 003847 553 VPNGSLANARYRKMGS--SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDM---EPKIGDFGLERLVT 627 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~---~~kL~DFGla~~~~ 627 (791)
+++++|.+++...... ....+++..+++++.||+.||+|||+.+++||||||+||+++.++ .+||+|||+++.+.
T Consensus 91 ~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~ 170 (277)
T cd05036 91 MAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIY 170 (277)
T ss_pred CCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccccccC
Confidence 9999999998765421 122489999999999999999999999999999999999998654 58999999998763
Q ss_pred CCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh
Q 003847 628 GDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT 707 (791)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt 707 (791)
....... .....++..|+|||++.+..++.++|||||||++|||++
T Consensus 171 ~~~~~~~----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~ 216 (277)
T cd05036 171 RASYYRK----------------------------------GGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFS 216 (277)
T ss_pred Cccceec----------------------------------CCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHc
Confidence 2211000 001123456999999998899999999999999999997
Q ss_pred -CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhcc
Q 003847 708 -GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779 (791)
Q Consensus 708 -G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 779 (791)
|+.||...... .............. ....+..+.+++.+|++.+|++||++.+|++.|++
T Consensus 217 ~g~~pf~~~~~~----------~~~~~~~~~~~~~~--~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 217 LGYMPYPGRTNQ----------EVMEFVTGGGRLDP--PKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred CCCCCCCCCCHH----------HHHHHHHcCCcCCC--CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 88888643211 11111111111111 12245678899999999999999999999999863
No 172
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=2e-36 Score=319.40 Aligned_cols=255 Identities=23% Similarity=0.329 Sum_probs=200.6
Q ss_pred cceeccccCceEEEEEEeC------CCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEe
Q 003847 479 SAYILGASGSSIMYKAVLE------DGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYD 551 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 551 (791)
....||+|+||.||++... ++..||+|.+.... ......+.+|+.+++.++|+||+++++++......++|||
T Consensus 10 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 89 (277)
T cd05032 10 LIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVME 89 (277)
T ss_pred EEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEEe
Confidence 3578999999999999853 24789999987553 3344678899999999999999999999999999999999
Q ss_pred ccCCCChhHHHHhhcCCC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCccccc
Q 003847 552 FVPNGSLANARYRKMGSS-----PCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLV 626 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~-----~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 626 (791)
|+++++|.+++....... ...+++..+..++.|++.||+|||+.+|+||||||+||+++.++.+||+|||+++.+
T Consensus 90 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~ 169 (277)
T cd05032 90 LMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDI 169 (277)
T ss_pred cCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCcccchhh
Confidence 999999999987643211 124788999999999999999999999999999999999999999999999998865
Q ss_pred CCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHH
Q 003847 627 TGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELL 706 (791)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ell 706 (791)
....... ......++..|+|||.+.+..++.++|||||||++|||+
T Consensus 170 ~~~~~~~----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 215 (277)
T cd05032 170 YETDYYR----------------------------------KGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMA 215 (277)
T ss_pred ccCcccc----------------------------------cCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhh
Confidence 4321100 011223677899999998888999999999999999999
Q ss_pred h-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhcc
Q 003847 707 T-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779 (791)
Q Consensus 707 t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 779 (791)
+ |+.||...... ......... .....+...+..+.+++.+||+.+|++|||+.++++.|++
T Consensus 216 t~g~~p~~~~~~~----------~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 216 TLAEQPYQGLSNE----------EVLKFVIDG--GHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred ccCCCCCccCCHH----------HHHHHHhcC--CCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 8 88888542111 111111111 1111122245778999999999999999999999999874
No 173
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.4e-36 Score=321.76 Aligned_cols=253 Identities=21% Similarity=0.287 Sum_probs=198.2
Q ss_pred ceeccccCceEEEEEEeC------CCcEEEEEEcCCCchh-hHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEec
Q 003847 480 AYILGASGSSIMYKAVLE------DGTALAVRRIGENSVD-RFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDF 552 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 552 (791)
.+.||+|+||.||+|... +++.||||++...... ..+.+.+|+.++++++||||+++++++...+..++++||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e~ 89 (283)
T cd05091 10 MEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSY 89 (283)
T ss_pred HHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEEc
Confidence 457899999999999853 3578999999765332 346688999999999999999999999999999999999
Q ss_pred cCCCChhHHHHhhcC-----------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccC
Q 003847 553 VPNGSLANARYRKMG-----------SSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFG 621 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFG 621 (791)
+++++|.+++..... .....+++..+..++.|++.||+|||+.||+||||||+||++++++.+||+|||
T Consensus 90 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg 169 (283)
T cd05091 90 CSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLG 169 (283)
T ss_pred CCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceEecccc
Confidence 999999999864311 011248889999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHH
Q 003847 622 LERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVI 701 (791)
Q Consensus 622 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvi 701 (791)
+++......... ......+++.|+|||.+.+..++.++|||||||+
T Consensus 170 ~~~~~~~~~~~~----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~ 215 (283)
T cd05091 170 LFREVYAADYYK----------------------------------LMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVV 215 (283)
T ss_pred cccccccchhee----------------------------------eccCccCCccccCHHHHhcCCCCcchhHHHHHHH
Confidence 988653221100 0111235678999999988889999999999999
Q ss_pred HHHHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCc-cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhcc
Q 003847 702 LLELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADF-EGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779 (791)
Q Consensus 702 l~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 779 (791)
+|||++ |..||.+... .++.+....... +.....+..+.+++.+||+.+|++||++++|++.|+.
T Consensus 216 l~el~~~g~~p~~~~~~-------------~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 216 LWEVFSYGLQPYCGYSN-------------QDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHHcCCCCCCCCCCH-------------HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 999998 7778754311 111111111111 1122355678899999999999999999999999875
No 174
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=4e-37 Score=321.31 Aligned_cols=240 Identities=23% Similarity=0.326 Sum_probs=189.5
Q ss_pred eeccccCceEEEEEEeCC--------CcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEec
Q 003847 481 YILGASGSSIMYKAVLED--------GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDF 552 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 552 (791)
+.||+|+||.||+|.... ...||+|.+........+.+..|+.+++.++||||+++++++..++..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 368999999999998532 235889988766555567888999999999999999999999999999999999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCC--------eEEeccCccc
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDME--------PKIGDFGLER 624 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~--------~kL~DFGla~ 624 (791)
+++|+|.+++..... .+++..++.++.||+.||+|||+.||+||||||+||+++.++. ++++|||++.
T Consensus 81 ~~~g~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 81 VKFGSLDTYLKKNKN----LINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred CCCCcHHHHHhcCCC----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 999999999876543 3899999999999999999999999999999999999987765 5889999876
Q ss_pred ccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHH
Q 003847 625 LVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILL 703 (791)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~ 703 (791)
..... ....++..|+|||++.+ ..++.++|||||||++|
T Consensus 157 ~~~~~----------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~ 196 (258)
T cd05078 157 TVLPK----------------------------------------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLW 196 (258)
T ss_pred ccCCc----------------------------------------hhccccCCccCchhccCCCCCCchhhHHHHHHHHH
Confidence 43211 12337788999999986 45799999999999999
Q ss_pred HHHhCCc-chhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhc
Q 003847 704 ELLTGKV-IVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALE 778 (791)
Q Consensus 704 elltG~~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 778 (791)
||++|.. ||..... ......... ....+. .....+.+++.+||+.||++|||++++++.|+
T Consensus 197 ~l~~g~~~~~~~~~~----------~~~~~~~~~--~~~~~~--~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 197 EIFSGGDKPLSALDS----------QKKLQFYED--RHQLPA--PKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred HHHcCCCCChhhccH----------HHHHHHHHc--cccCCC--CCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 9999964 5533210 000111111 111111 13456889999999999999999999999874
No 175
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.5e-36 Score=323.96 Aligned_cols=258 Identities=26% Similarity=0.361 Sum_probs=199.5
Q ss_pred ceeccccCceEEEEEEeC-CC--cEEEEEEcCCC-chhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEeccC
Q 003847 480 AYILGASGSSIMYKAVLE-DG--TALAVRRIGEN-SVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g--~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
..+||+|+||.||+|..+ ++ ..+++|.++.. .....+.+.+|+++++++ +||||+++++++...+..++||||++
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~ 86 (297)
T cd05089 7 EDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAP 86 (297)
T ss_pred eeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecC
Confidence 458999999999999864 33 35789988753 333456789999999999 79999999999999999999999999
Q ss_pred CCChhHHHHhhcCC-----------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcc
Q 003847 555 NGSLANARYRKMGS-----------SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLE 623 (791)
Q Consensus 555 ~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla 623 (791)
+++|.+++...... ....+++..++.|+.|++.||+|||+.||+||||||+|||+++++.+||+|||++
T Consensus 87 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~ 166 (297)
T cd05089 87 YGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLS 166 (297)
T ss_pred CCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCcCCC
Confidence 99999998764311 1124889999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHH
Q 003847 624 RLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILL 703 (791)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ 703 (791)
........ ......+..|+|||++.+..++.++|||||||++|
T Consensus 167 ~~~~~~~~-------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ 209 (297)
T cd05089 167 RGEEVYVK-------------------------------------KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLW 209 (297)
T ss_pred ccccceec-------------------------------------cCCCCcCccccCchhhccCCCCchhhHHHHHHHHH
Confidence 64221100 00111345699999999888999999999999999
Q ss_pred HHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCC
Q 003847 704 ELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPS 782 (791)
Q Consensus 704 ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 782 (791)
||++ |+.||...... ............ .........+.+|+.+||+.+|.+||+++++++.|+.+..
T Consensus 210 el~t~g~~pf~~~~~~----------~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~ 277 (297)
T cd05089 210 EIVSLGGTPYCGMTCA----------ELYEKLPQGYRM--EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLE 277 (297)
T ss_pred HHHcCCCCCCCCCCHH----------HHHHHHhcCCCC--CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 9998 98998543211 111111111111 1112245678899999999999999999999999988765
Q ss_pred CCCC
Q 003847 783 SPSP 786 (791)
Q Consensus 783 ~~~p 786 (791)
...+
T Consensus 278 ~~~~ 281 (297)
T cd05089 278 ARKA 281 (297)
T ss_pred hhcc
Confidence 4443
No 176
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=2.6e-36 Score=315.17 Aligned_cols=252 Identities=30% Similarity=0.411 Sum_probs=201.9
Q ss_pred eeccccCceEEEEEEeCC----CcEEEEEEcCCCchh-hHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 481 YILGASGSSIMYKAVLED----GTALAVRRIGENSVD-RFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
+.||+|+||.||+|.... +..||+|.+...... ..+.+.+|+++++.++|+||+++++++......++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 368999999999999543 889999999875443 367899999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCC----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCC
Q 003847 556 GSLANARYRKMGS----SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTS 631 (791)
Q Consensus 556 gsL~~~l~~~~~~----~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 631 (791)
++|.+++...... ....+++..+..++.|++.||+|||+.+|+||||||+||+++.++.+||+|||.+........
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~ 160 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY 160 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccccc
Confidence 9999998875211 012489999999999999999999999999999999999999999999999999987653321
Q ss_pred CCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCc
Q 003847 632 SSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKV 710 (791)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~ 710 (791)
.. ......++..|+|||.+....++.++||||+|+++|||++ |..
T Consensus 161 ~~----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~ 206 (262)
T cd00192 161 YR----------------------------------KKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGAT 206 (262)
T ss_pred cc----------------------------------cccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCC
Confidence 00 0112336788999999988889999999999999999999 588
Q ss_pred chhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhc
Q 003847 711 IVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALE 778 (791)
Q Consensus 711 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 778 (791)
||...... .......+ ..........+.++.+++.+||..+|++||++.|+++.|+
T Consensus 207 p~~~~~~~---------~~~~~~~~---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 207 PYPGLSNE---------EVLEYLRK---GYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred CCCCCCHH---------HHHHHHHc---CCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 88654110 01111111 1111222234678899999999999999999999999874
No 177
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.9e-36 Score=321.15 Aligned_cols=248 Identities=18% Similarity=0.209 Sum_probs=195.3
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCch---hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSV---DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
...||+|+||+||++.. .+++.||+|.+..... .....+.+|++++++++|+||+++++++..++..++||||+++
T Consensus 5 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 84 (285)
T cd05632 5 YRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNG 84 (285)
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccC
Confidence 35799999999999985 5789999999865422 2234578899999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
++|.+++...... .+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++........
T Consensus 85 ~~L~~~~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~---- 157 (285)
T cd05632 85 GDLKFHIYNMGNP---GFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGES---- 157 (285)
T ss_pred ccHHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCc----
Confidence 9999888754322 389999999999999999999999999999999999999999999999999875432110
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
.....|+..|+|||++.+..++.++|+|||||++|||++|+.||...
T Consensus 158 ---------------------------------~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~ 204 (285)
T cd05632 158 ---------------------------------IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGR 204 (285)
T ss_pred ---------------------------------ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCC
Confidence 11234889999999999889999999999999999999999999643
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHHH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPS-----MKEALQA 776 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~~ 776 (791)
... .....+..................+.+|+.+|++.||++||+ +.++++.
T Consensus 205 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 205 KEK---------VKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred CHH---------HHHHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 110 000111111111111112224456789999999999999999 6677663
No 178
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.2e-36 Score=325.66 Aligned_cols=254 Identities=26% Similarity=0.377 Sum_probs=197.1
Q ss_pred ceeccccCceEEEEEEeC-CCc--EEEEEEcCCC-chhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEeccC
Q 003847 480 AYILGASGSSIMYKAVLE-DGT--ALAVRRIGEN-SVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~--~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
.+.||+|+||.||+|..+ ++. .+|+|.++.. .....+.+.+|++++.++ +|+||+++++++...+..++||||++
T Consensus 12 ~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 91 (303)
T cd05088 12 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 91 (303)
T ss_pred eeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCC
Confidence 468999999999999954 454 5688887653 334456788999999999 89999999999999999999999999
Q ss_pred CCChhHHHHhhcCC-----------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcc
Q 003847 555 NGSLANARYRKMGS-----------SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLE 623 (791)
Q Consensus 555 ~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla 623 (791)
+++|.+++...... ....+++.+++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++
T Consensus 92 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~ 171 (303)
T cd05088 92 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 171 (303)
T ss_pred CCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEEeCccccC
Confidence 99999998765321 1124889999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHH
Q 003847 624 RLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILL 703 (791)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ 703 (791)
........ .....++..|+|||++.+..++.++|||||||++|
T Consensus 172 ~~~~~~~~-------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 214 (303)
T cd05088 172 RGQEVYVK-------------------------------------KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLW 214 (303)
T ss_pred cccchhhh-------------------------------------cccCCCcccccCHHHHhccCCcccccchhhhhHHH
Confidence 63211000 00112456799999998888999999999999999
Q ss_pred HHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCC
Q 003847 704 ELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPS 782 (791)
Q Consensus 704 ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 782 (791)
||+| |..||...... ........... ..........+.+++.+||+.+|++||++.++++.|+++..
T Consensus 215 ellt~g~~p~~~~~~~----------~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~ 282 (303)
T cd05088 215 EIVSLGGTPYCGMTCA----------ELYEKLPQGYR--LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 282 (303)
T ss_pred HHHhcCCCCcccCChH----------HHHHHHhcCCc--CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 9998 99998543111 01111111111 11111234578899999999999999999999999887643
No 179
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=2.6e-36 Score=315.90 Aligned_cols=248 Identities=21% Similarity=0.289 Sum_probs=197.5
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc-----hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEecc
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS-----VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
.+.||+|++|.||++.. .+++.||+|.+.... ....+.+.+|++++++++||||+++++++.+.+..++|+||+
T Consensus 7 ~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 86 (263)
T cd06625 7 GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEYM 86 (263)
T ss_pred cceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEEEC
Confidence 56899999999999984 568999999986432 223457889999999999999999999999999999999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
++++|.+++.... .+++..+..++.|++.||+|||+.||+||||||+||+++.++.++|+|||+++.........
T Consensus 87 ~~~~l~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~ 161 (263)
T cd06625 87 PGGSVKDQLKAYG-----ALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSG 161 (263)
T ss_pred CCCcHHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccccc
Confidence 9999999887653 38899999999999999999999999999999999999999999999999987653211000
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
.......|+..|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 162 ---------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 208 (263)
T cd06625 162 ---------------------------------TGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWA 208 (263)
T ss_pred ---------------------------------ccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCcc
Confidence 00012347788999999999889999999999999999999999985
Q ss_pred ccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 714 DELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
.... ............. ...+......+.+++.+||..+|++|||+.|+++.
T Consensus 209 ~~~~---------~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 209 EFEA---------MAAIFKIATQPTN--PQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred ccch---------HHHHHHHhccCCC--CCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 4311 0011111111111 11122345678899999999999999999999864
No 180
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.8e-36 Score=351.86 Aligned_cols=275 Identities=21% Similarity=0.220 Sum_probs=203.0
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
.+.||+|+||.||+|.. .+|+.||||++.... ....+++.+|++++++++||||+++++++.+.+..++||||++|
T Consensus 7 i~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~eG 86 (932)
T PRK13184 7 IRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEG 86 (932)
T ss_pred EEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCCC
Confidence 46899999999999995 468999999997532 22346789999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCC------CCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCC
Q 003847 556 GSLANARYRKMGSS------PCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGD 629 (791)
Q Consensus 556 gsL~~~l~~~~~~~------~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 629 (791)
++|.+++....... ...+++..+..++.||++||+|||+.||+||||||+||+++.++.+||+|||+++.....
T Consensus 87 GSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~ 166 (932)
T PRK13184 87 YTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLE 166 (932)
T ss_pred CCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcceecccc
Confidence 99999887532111 123667888999999999999999999999999999999999999999999999876322
Q ss_pred CCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCC
Q 003847 630 TSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~ 709 (791)
.......... ..+............+||+.|+|||++.+..++.++|||||||++|||+||+
T Consensus 167 ~~~~~~l~~~------------------~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~ 228 (932)
T PRK13184 167 EEDLLDIDVD------------------ERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLS 228 (932)
T ss_pred cccccccccc------------------cccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCC
Confidence 1110000000 0000000111223456999999999999999999999999999999999999
Q ss_pred cchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHhccCCC
Q 003847 710 VIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRP-SMKEALQALEKIPS 782 (791)
Q Consensus 710 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~i~~ 782 (791)
.||......... . .....++. ......+.+..+.+++.+|++.||++|| +++++++.|+....
T Consensus 229 ~PF~~~~~~ki~----~---~~~i~~P~---~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 229 FPYRRKKGRKIS----Y---RDVILSPI---EVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred CCCCCcchhhhh----h---hhhccChh---hccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 999653211000 0 00000110 0011122456688999999999999995 67778787776543
No 181
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=2.4e-36 Score=319.39 Aligned_cols=258 Identities=20% Similarity=0.258 Sum_probs=202.4
Q ss_pred cceeccccCceEEEEEEeCC-----CcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEc-cCceEEEEe
Q 003847 479 SAYILGASGSSIMYKAVLED-----GTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG-VDEKLIIYD 551 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~-----g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-~~~~~lv~e 551 (791)
..++||+|+||.||+|...+ +..|++|++... .....+.+.+|+.++++++|+||+++++++.. ....++++|
T Consensus 10 ~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 89 (280)
T cd05043 10 LSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYP 89 (280)
T ss_pred EeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEE
Confidence 45789999999999999655 789999998754 33445678899999999999999999998776 467899999
Q ss_pred ccCCCChhHHHHhhcCC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCC
Q 003847 552 FVPNGSLANARYRKMGS---SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTG 628 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~---~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 628 (791)
|+++++|.+++...... ....+++.++..++.|++.||+|||+.+++||||||+||+++.++.+||+|||+++.+..
T Consensus 90 ~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~ 169 (280)
T cd05043 90 YMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFP 169 (280)
T ss_pred cCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCcccccC
Confidence 99999999998764322 112489999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-
Q 003847 629 DTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT- 707 (791)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt- 707 (791)
...... .....++..|+|||++.+..++.++||||||+++||+++
T Consensus 170 ~~~~~~----------------------------------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~ 215 (280)
T cd05043 170 MDYHCL----------------------------------GDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTL 215 (280)
T ss_pred CceEEe----------------------------------CCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcC
Confidence 221100 001225667999999998889999999999999999999
Q ss_pred CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCC
Q 003847 708 GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPS 782 (791)
Q Consensus 708 G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 782 (791)
|+.||...... ........... .......+..+.+++.+||..||++|||+.++++.|+.+..
T Consensus 216 g~~p~~~~~~~----------~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 216 GQTPYVEIDPF----------EMAAYLKDGYR--LAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred CCCCcCcCCHH----------HHHHHHHcCCC--CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 99998653111 11111111111 11111235678999999999999999999999999987653
No 182
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-36 Score=314.28 Aligned_cols=257 Identities=23% Similarity=0.325 Sum_probs=194.6
Q ss_pred eeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhc--cCCCCccceeeEEEccC----ceEEEEeccC
Q 003847 481 YILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAK--LVHPNLVRIRGFYWGVD----EKLIIYDFVP 554 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~~----~~~lv~e~~~ 554 (791)
++||+|+||.||||.+. ++.||||++.... .+.|+.|-+|.+. ++|+||+++++.-+... +++||+||.+
T Consensus 216 eli~~Grfg~V~KaqL~-~~~VAVKifp~~~---kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~ 291 (534)
T KOG3653|consen 216 ELIGRGRFGCVWKAQLD-NRLVAVKIFPEQE---KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHP 291 (534)
T ss_pred HHhhcCccceeehhhcc-CceeEEEecCHHH---HHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeecc
Confidence 47999999999999985 5999999997643 3567888777764 58999999999876655 7899999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc---------CCCeecCCCCCCeEecCCCCeEEeccCcccc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE---------KKHVHGNLKPRNVLLGNDMEPKIGDFGLERL 625 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~---------~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 625 (791)
.|+|.+|+..+- ++|....+|+.-+++||+|||+ ..|+|||||+.|||+..|++..|+|||+|..
T Consensus 292 kGsL~dyL~~nt------isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~ 365 (534)
T KOG3653|consen 292 KGSLCDYLKANT------ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALR 365 (534)
T ss_pred CCcHHHHHHhcc------ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEE
Confidence 999999999874 9999999999999999999997 4699999999999999999999999999998
Q ss_pred cCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCC------CCchhhHHHH
Q 003847 626 VTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKP------NPKWDVYSFG 699 (791)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~------~~~sDvwSlG 699 (791)
+....... .....+||..|||||++.+..- -.+.||||+|
T Consensus 366 ~~p~~~~~----------------------------------d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamg 411 (534)
T KOG3653|consen 366 LEPGKPQG----------------------------------DTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMG 411 (534)
T ss_pred ecCCCCCc----------------------------------chhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHH
Confidence 76432211 1223569999999999976321 1368999999
Q ss_pred HHHHHHHhCCcchh-cccc-------CCCCc--chhchhHHHHHHHHhhhcCccc---hHHHHHHHHHHHhhccCCCCCC
Q 003847 700 VILLELLTGKVIVV-DELG-------QGNGL--LVEDKNRAIRLADAAIRADFEG---KEEALLSCFKLGYSCASPLPQK 766 (791)
Q Consensus 700 vil~elltG~~pf~-~~~~-------~~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~ 766 (791)
.|+|||++.-.-+. +..+ ..+.. .+.+.+ ..++..+.++.++. ....+..+.+.+..||..||+.
T Consensus 412 LVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq--~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeA 489 (534)
T KOG3653|consen 412 LVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQ--ELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEA 489 (534)
T ss_pred HHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHH--HHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhh
Confidence 99999999654221 1111 11111 111111 12223333333221 1124567889999999999999
Q ss_pred CCCHHHHHHHhccCCCC
Q 003847 767 RPSMKEALQALEKIPSS 783 (791)
Q Consensus 767 RPs~~evl~~L~~i~~~ 783 (791)
|.|+.=|-+++.++...
T Consensus 490 RLTA~Cv~eR~~~l~~~ 506 (534)
T KOG3653|consen 490 RLTAGCVEERMAELMML 506 (534)
T ss_pred hhhhHHHHHHHHHHhcc
Confidence 99999888888776543
No 183
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=3.5e-36 Score=312.71 Aligned_cols=249 Identities=24% Similarity=0.369 Sum_probs=199.0
Q ss_pred eeccccCceEEEEEEeCCCcEEEEEEcCCCchh-hHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCChh
Q 003847 481 YILGASGSSIMYKAVLEDGTALAVRRIGENSVD-RFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLA 559 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 559 (791)
++||+|+||.||++...+++.||+|.+...... ..+.+.+|++++++++|+||+++++++...+..++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 368999999999999766999999998765433 4568999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCCc
Q 003847 560 NARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639 (791)
Q Consensus 560 ~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~ 639 (791)
+++..... .+++..+..++.|++.||+|||+++++||||||+||+++.++.+||+|||++...........
T Consensus 81 ~~l~~~~~----~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~----- 151 (251)
T cd05041 81 TFLRKKKN----RLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVS----- 151 (251)
T ss_pred HHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceec-----
Confidence 99866432 378999999999999999999999999999999999999999999999999876532110000
Q ss_pred cccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhccccC
Q 003847 640 RNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDELGQ 718 (791)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~ 718 (791)
.....++..|+|||.+.+..++.++|||||||++|||+| |..||......
T Consensus 152 -----------------------------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~ 202 (251)
T cd05041 152 -----------------------------DGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ 202 (251)
T ss_pred -----------------------------cccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH
Confidence 001123556999999988889999999999999999999 77787543110
Q ss_pred CCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhcc
Q 003847 719 GNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 779 (791)
.......... ........+..+.+++.+|+..+|++||++.|+++.|++
T Consensus 203 ----------~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 203 ----------QTRERIESGY--RMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred ----------HHHHHHhcCC--CCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 1111111111 111122345688999999999999999999999999863
No 184
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2.8e-36 Score=315.57 Aligned_cols=252 Identities=24% Similarity=0.354 Sum_probs=193.6
Q ss_pred eeccccCceEEEEEEeC----CCcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEc-cCceEEEEeccC
Q 003847 481 YILGASGSSIMYKAVLE----DGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG-VDEKLIIYDFVP 554 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-~~~~~lv~e~~~ 554 (791)
++||+|+||.||+|... ++..||+|++... .....+.+.+|+.+++.++||||+++++++.. ++..++||||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 36899999999999843 2468999998653 33445788899999999999999999998764 556789999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
+++|.+++..... ..++..+..++.|++.||+|||+.+++||||||+|||++.++.+||+|||+++.+........
T Consensus 81 ~~~L~~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 156 (262)
T cd05058 81 HGDLRNFIRSETH----NPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSV 156 (262)
T ss_pred CCCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceee
Confidence 9999999876432 267888899999999999999999999999999999999999999999999876542211000
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCc-chh
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKV-IVV 713 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~-pf~ 713 (791)
.......++..|+|||.+.+..++.++|||||||++|||++|+. ||.
T Consensus 157 --------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~ 204 (262)
T cd05058 157 --------------------------------HNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 204 (262)
T ss_pred --------------------------------cccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCC
Confidence 00112235677999999988889999999999999999999655 553
Q ss_pred ccccCCCCcchhchhHHHHHHHHhhhcC-ccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 714 DELGQGNGLLVEDKNRAIRLADAAIRAD-FEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
.... .+.......+. .......+..+.+++.+||..+|++||++.|+++.|+++.
T Consensus 205 ~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 205 DVDS-------------FDITVYLLQGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred CCCH-------------HHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 3210 01111111111 1111223467889999999999999999999999998764
No 185
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=8.1e-37 Score=335.57 Aligned_cols=249 Identities=17% Similarity=0.188 Sum_probs=192.6
Q ss_pred hcceeccccCceEEEEEEe-CCCcEEEEEEcCCC---chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEecc
Q 003847 478 ASAYILGASGSSIMYKAVL-EDGTALAVRRIGEN---SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
...+.||+|+||.||+++. .+++.||+|++... .....+.+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus 46 ~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~ 125 (371)
T cd05622 46 EVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYM 125 (371)
T ss_pred EEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCC
Confidence 3457899999999999995 46899999998642 2223356788999999999999999999999999999999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
++|+|.+++... .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.+......
T Consensus 126 ~gg~L~~~~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~- 198 (371)
T cd05622 126 PGGDLVNLMSNY------DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV- 198 (371)
T ss_pred CCCcHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcc-
Confidence 999999988653 2888999999999999999999999999999999999999999999999999865421110
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC----CCCCchhhHHHHHHHHHHHhCC
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI----KPNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~----~~~~~sDvwSlGvil~elltG~ 709 (791)
.....+||+.|+|||++.+. .++.++|||||||++|||++|+
T Consensus 199 ----------------------------------~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~ 244 (371)
T cd05622 199 ----------------------------------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGD 244 (371)
T ss_pred ----------------------------------cccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCC
Confidence 11234599999999998753 3789999999999999999999
Q ss_pred cchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 003847 710 VIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQK--RPSMKEALQA 776 (791)
Q Consensus 710 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 776 (791)
.||...... .....+........++........+.+++.+|+..++.+ |+++.|+++.
T Consensus 245 ~Pf~~~~~~---------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 245 TPFYADSLV---------GTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred CCCCCCCHH---------HHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 999653210 011111111101111222224567888999999844433 7799998875
No 186
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=2.7e-36 Score=316.73 Aligned_cols=252 Identities=21% Similarity=0.386 Sum_probs=199.1
Q ss_pred ceeccccCceEEEEEEeC----CCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccC
Q 003847 480 AYILGASGSSIMYKAVLE----DGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
.+.||+|+||.||+|... .+..+|+|.++... ....+.+.+|+.++++++||||+++++++...+..++||||++
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (267)
T cd05066 9 EKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYME 88 (267)
T ss_pred eeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCC
Confidence 568999999999999853 23479999987643 3345688999999999999999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
+++|.+++..... .+++.++..++.|++.||+|||+.+++||||||+||+++.++.+||+|||++..+........
T Consensus 89 ~~~L~~~~~~~~~----~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 164 (267)
T cd05066 89 NGSLDAFLRKHDG----QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAY 164 (267)
T ss_pred CCCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccccceee
Confidence 9999999876532 389999999999999999999999999999999999999999999999999987643211000
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchh
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVV 713 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~ 713 (791)
......++..|+|||.+.+..++.++|+||||+++||+++ |+.||.
T Consensus 165 ---------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~ 211 (267)
T cd05066 165 ---------------------------------TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYW 211 (267)
T ss_pred ---------------------------------ecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcc
Confidence 0011123567999999998889999999999999999887 999986
Q ss_pred ccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 714 DELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
+.... .....+.+. .. .+.....+..+.+++.+|++.+|.+||++.++++.|+++
T Consensus 212 ~~~~~---------~~~~~~~~~-~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 212 EMSNQ---------DVIKAIEEG-YR--LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred cCCHH---------HHHHHHhCC-Cc--CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 53211 001111110 00 111122456788999999999999999999999999875
No 187
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=3.5e-36 Score=316.21 Aligned_cols=253 Identities=21% Similarity=0.253 Sum_probs=190.3
Q ss_pred eccccCceEEEEEEeCC---CcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 482 ILGASGSSIMYKAVLED---GTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~~~~---g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
.||+|+||.||+|...+ +..+|+|.++... ......+.+|+.++++++||||+++++++.+....++||||+++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD 81 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence 58999999999998543 4679999987653 2334578899999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++...........++..+..++.|++.||+|||+.+++||||||+||+++.++.+||+|||+++........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~----- 156 (269)
T cd05087 82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYY----- 156 (269)
T ss_pred HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCccee-----
Confidence 999987654322224677888899999999999999999999999999999999999999999998653221100
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC-------CCCCchhhHHHHHHHHHHHh-CC
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI-------KPNPKWDVYSFGVILLELLT-GK 709 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-------~~~~~sDvwSlGvil~ellt-G~ 709 (791)
.......|+..|+|||++.+. .++.++||||||+++|||++ |+
T Consensus 157 -----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~ 207 (269)
T cd05087 157 -----------------------------VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGS 207 (269)
T ss_pred -----------------------------ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCC
Confidence 011123477889999998642 35789999999999999996 99
Q ss_pred cchhccccCCCCcchhchhHHHHHHHHh-hhc-CccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhc
Q 003847 710 VIVVDELGQGNGLLVEDKNRAIRLADAA-IRA-DFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALE 778 (791)
Q Consensus 710 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 778 (791)
.||...... .......... ... ...........+.+++.+|+ .+|++|||++||++.|+
T Consensus 208 ~p~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 208 QPYRHLSDE---------QVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCCCChH---------HHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 998542111 0000000000 000 00000113356778999998 68999999999999885
No 188
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=3.2e-37 Score=334.23 Aligned_cols=239 Identities=17% Similarity=0.198 Sum_probs=185.5
Q ss_pred ccccCceEEEEEEe-CCCcEEEEEEcCCCch---hhHHHHHHHHHHHhcc---CCCCccceeeEEEccCceEEEEeccCC
Q 003847 483 LGASGSSIMYKAVL-EDGTALAVRRIGENSV---DRFRDFETQVRVIAKL---VHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 483 lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
||+|+||+||+|+. .+++.||||++..... .....+..|..++.+. +||||+++++++...+..|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 79999999999995 4689999999865321 2223445566777655 699999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|+|.+++.... .+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 81 g~L~~~l~~~~-----~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~---- 151 (330)
T cd05586 81 GELFWHLQKEG-----RFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNK---- 151 (330)
T ss_pred ChHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCC----
Confidence 99998886543 389999999999999999999999999999999999999999999999999875321110
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC-CCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI-KPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
.....+||..|+|||++.+. .++.++|||||||++|||++|+.||..
T Consensus 152 --------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~ 199 (330)
T cd05586 152 --------------------------------TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYA 199 (330)
T ss_pred --------------------------------CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCC
Confidence 11234599999999998754 479999999999999999999999865
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccch-HHHHHHHHHHHhhccCCCCCCCC----CHHHHHH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGK-EEALLSCFKLGYSCASPLPQKRP----SMKEALQ 775 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RP----s~~evl~ 775 (791)
... .++......+..... ......+.+++.+||+.||++|| ++.++++
T Consensus 200 ~~~-------------~~~~~~i~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 200 EDT-------------QQMYRNIAFGKVRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred CCH-------------HHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 311 111111111111111 11346778999999999999998 4566554
No 189
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.8e-36 Score=323.48 Aligned_cols=258 Identities=23% Similarity=0.338 Sum_probs=200.1
Q ss_pred hcceeccccCceEEEEEEeC--------CCcEEEEEEcCCC-chhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceE
Q 003847 478 ASAYILGASGSSIMYKAVLE--------DGTALAVRRIGEN-SVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKL 547 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~~--------~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~ 547 (791)
.....||+|+||.||+++.. ....||+|.++.. .......+..|+++++++ +||||+++++++...+..+
T Consensus 15 ~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 94 (314)
T cd05099 15 VLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLY 94 (314)
T ss_pred eeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceE
Confidence 34678999999999999742 2467999998754 233456788999999999 6999999999999999999
Q ss_pred EEEeccCCCChhHHHHhhcCC-----------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeE
Q 003847 548 IIYDFVPNGSLANARYRKMGS-----------SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616 (791)
Q Consensus 548 lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~k 616 (791)
+||||+++|+|.+++...... ....+++.++..++.|++.||+|||++||+||||||+||+++.++.+|
T Consensus 95 lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~k 174 (314)
T cd05099 95 VIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMK 174 (314)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCCCcEE
Confidence 999999999999999764321 112489999999999999999999999999999999999999999999
Q ss_pred EeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhH
Q 003847 617 IGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVY 696 (791)
Q Consensus 617 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvw 696 (791)
|+|||+++.......... .....++..|+|||++.+..++.++|||
T Consensus 175 L~Dfg~~~~~~~~~~~~~----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Diw 220 (314)
T cd05099 175 IADFGLARGVHDIDYYKK----------------------------------TSNGRLPVKWMAPEALFDRVYTHQSDVW 220 (314)
T ss_pred Eccccccccccccccccc----------------------------------cccCCCCccccCHHHHccCCcCccchhh
Confidence 999999986542211000 0011244579999999988899999999
Q ss_pred HHHHHHHHHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 697 SFGVILLELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 697 SlGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
||||++|||++ |..||..... ............ .........++.+++.+||+.+|++||++.|+++
T Consensus 221 slG~~l~el~~~g~~p~~~~~~----------~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 221 SFGILMWEIFTLGGSPYPGIPV----------EELFKLLREGHR--MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred HHHHHHHHHHhCCCCCCCCCCH----------HHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 99999999999 7888754211 011111111111 1111224557889999999999999999999999
Q ss_pred HhccCC
Q 003847 776 ALEKIP 781 (791)
Q Consensus 776 ~L~~i~ 781 (791)
.|+++.
T Consensus 289 ~l~~~~ 294 (314)
T cd05099 289 ALDKVL 294 (314)
T ss_pred HHHHHH
Confidence 998875
No 190
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=2.8e-36 Score=317.16 Aligned_cols=254 Identities=22% Similarity=0.295 Sum_probs=200.0
Q ss_pred cceeccccCceEEEEEEeCC----CcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEecc
Q 003847 479 SAYILGASGSSIMYKAVLED----GTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~----g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
....||+|+||.||+|...+ ...||||...... ....+.+.+|+.++++++||||+++++++.+ +..++||||+
T Consensus 10 ~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e~~ 88 (270)
T cd05056 10 LGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVMELA 88 (270)
T ss_pred eeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEEcC
Confidence 45789999999999998543 3579999987654 4455689999999999999999999998865 5678999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
++++|.+++..... .+++..+..++.|++.||+|||+.+++||||||+||+++.++.+||+|||+++.........
T Consensus 89 ~~~~L~~~l~~~~~----~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~ 164 (270)
T cd05056 89 PLGELRSYLQVNKY----SLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYK 164 (270)
T ss_pred CCCcHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeeccccccee
Confidence 99999999876432 38999999999999999999999999999999999999999999999999988654321100
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcch
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIV 712 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf 712 (791)
.....++..|+|||.+....++.++||||||+++|||++ |+.||
T Consensus 165 -----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf 209 (270)
T cd05056 165 -----------------------------------ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPF 209 (270)
T ss_pred -----------------------------------cCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCC
Confidence 001124567999999988889999999999999999986 99998
Q ss_pred hccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCCC
Q 003847 713 VDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSSP 784 (791)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 784 (791)
...... .....+.. ..........+..+.+++.+|+..+|++|||+.++++.|+++....
T Consensus 210 ~~~~~~---------~~~~~~~~---~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~~ 269 (270)
T cd05056 210 QGVKNN---------DVIGRIEN---GERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQEE 269 (270)
T ss_pred CCCCHH---------HHHHHHHc---CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 553211 00111100 0011112224567889999999999999999999999999876543
No 191
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.3e-36 Score=334.86 Aligned_cols=256 Identities=20% Similarity=0.253 Sum_probs=191.9
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccC-----ceEEEEe
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVD-----EKLIIYD 551 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-----~~~lv~e 551 (791)
.+.||+|+||.||++.. .+|+.||||++... .....+.+.+|+++++.++|+||+++++++...+ ..|+|||
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 84 (372)
T cd07853 5 DRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTE 84 (372)
T ss_pred cceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEee
Confidence 46899999999999995 57899999998653 2334567889999999999999999999998776 7899999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTS 631 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 631 (791)
|+. ++|.+++.... .+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 85 ~~~-~~l~~~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~ 158 (372)
T cd07853 85 LMQ-SDLHKIIVSPQ-----PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDES 158 (372)
T ss_pred ccc-cCHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCcc
Confidence 996 57877765432 389999999999999999999999999999999999999999999999999886432211
Q ss_pred CCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC-CCCCchhhHHHHHHHHHHHhCCc
Q 003847 632 SSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI-KPNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~~sDvwSlGvil~elltG~~ 710 (791)
. ......+|+.|+|||++.+. .++.++|||||||++|||++|+.
T Consensus 159 ~-----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~ 203 (372)
T cd07853 159 K-----------------------------------HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRI 203 (372)
T ss_pred c-----------------------------------cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCC
Confidence 0 11123478889999998774 47999999999999999999999
Q ss_pred chhccccCCCCcch---------hchhHHH-HHHHHhhhcCc---------cchHHHHHHHHHHHhhccCCCCCCCCCHH
Q 003847 711 IVVDELGQGNGLLV---------EDKNRAI-RLADAAIRADF---------EGKEEALLSCFKLGYSCASPLPQKRPSMK 771 (791)
Q Consensus 711 pf~~~~~~~~~~~~---------~~~~~~~-~~~~~~~~~~~---------~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 771 (791)
||...........+ .+..... ........... .........+.+|+.+||+.||++|||+.
T Consensus 204 pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~ 283 (372)
T cd07853 204 LFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAA 283 (372)
T ss_pred CCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHH
Confidence 99653221000000 0000000 00000000000 00011245678999999999999999999
Q ss_pred HHHHH
Q 003847 772 EALQA 776 (791)
Q Consensus 772 evl~~ 776 (791)
|+++.
T Consensus 284 e~l~h 288 (372)
T cd07853 284 DALAH 288 (372)
T ss_pred HHhcC
Confidence 99874
No 192
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.4e-36 Score=317.21 Aligned_cols=249 Identities=29% Similarity=0.423 Sum_probs=196.0
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCchhhHH--HHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENSVDRFR--DFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~--~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
.+.||+|+||+||+++.. +++.||+|++......... ...+|+.++++++||||+++++++......++||||++++
T Consensus 4 ~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~~ 83 (260)
T PF00069_consen 4 VKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPGG 83 (260)
T ss_dssp EEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETTE
T ss_pred eEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccccccccc
Confidence 468999999999999954 5679999999876544322 3456999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++.... .+++..+..++.|+++||+|||+.+|+|+||||+||+++.++.++|+|||.+........
T Consensus 84 ~L~~~l~~~~-----~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~----- 153 (260)
T PF00069_consen 84 SLQDYLQKNK-----PLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNE----- 153 (260)
T ss_dssp BHHHHHHHHS-----SBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTS-----
T ss_pred cccccccccc-----cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-----
Confidence 9999998433 389999999999999999999999999999999999999999999999999876411110
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc-CCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR-SIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~-~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
......++..|+|||++. +..++.++||||+|+++|+|++|+.||...
T Consensus 154 -------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~ 202 (260)
T PF00069_consen 154 -------------------------------NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEES 202 (260)
T ss_dssp -------------------------------EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTS
T ss_pred -------------------------------ccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 112344888999999998 788999999999999999999999998653
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
. .............................+.+++.+||+.||++||++.++++
T Consensus 203 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 203 N------SDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp S------HHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred c------chhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0 00111111111111111111111112378899999999999999999999985
No 193
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2.5e-36 Score=319.22 Aligned_cols=246 Identities=22% Similarity=0.335 Sum_probs=194.0
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
.++||+|+||.||+|+. .+++.||+|.+... .....+.+.+|++++++++||||+++++++...+..++||||+++++
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 85 (279)
T cd06619 6 QEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGS 85 (279)
T ss_pred eeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCC
Confidence 35899999999999984 57899999998654 33445678899999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|..+. .+++..+..++.|++.||+|||+.||+|+||||+||+++.++.+||+|||++..+....
T Consensus 86 l~~~~---------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~------- 149 (279)
T cd06619 86 LDVYR---------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI------- 149 (279)
T ss_pred hHHhh---------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc-------
Confidence 96541 27888999999999999999999999999999999999999999999999987653211
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELG 717 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~ 717 (791)
.....||..|+|||++.+..++.++||||||+++|+|++|+.||.....
T Consensus 150 -------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~ 198 (279)
T cd06619 150 -------------------------------AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQK 198 (279)
T ss_pred -------------------------------ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcc
Confidence 1123588899999999988899999999999999999999999865322
Q ss_pred CCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 718 QGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
....... ........+. ...... ......++.+++.+|++.+|++||+++|+++.
T Consensus 199 ~~~~~~~--~~~~~~~~~~-~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 199 NQGSLMP--LQLLQCIVDE-DPPVLP-VGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred cccccch--HHHHHHHhcc-CCCCCC-CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 1111100 0000111111 111111 11234578899999999999999999999875
No 194
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=3.9e-36 Score=315.67 Aligned_cols=250 Identities=24% Similarity=0.330 Sum_probs=195.4
Q ss_pred cceeccccCceEEEEEE-eCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 479 SAYILGASGSSIMYKAV-LEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
...+||+|+||.||+|. ..+++.||+|.+........+.+.+|++++++++|+||+++++++...+..++|+||+++++
T Consensus 12 ~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 91 (268)
T cd06624 12 ERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGS 91 (268)
T ss_pred ceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCC
Confidence 34689999999999999 45678999999987766667789999999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecC-CCCeEEeccCcccccCCCCCCCcCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN-DMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~-~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
|.+++...... ...++..+..++.|++.||+|||+.||+||||||+||+++. ++.+||+|||++..+.....
T Consensus 92 L~~~l~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~----- 164 (268)
T cd06624 92 LSALLRSKWGP--LKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINP----- 164 (268)
T ss_pred HHHHHHHhccc--CCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCC-----
Confidence 99998764321 01278889999999999999999999999999999999986 67899999999876532110
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCC--CCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIK--PNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~--~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
......|+..|+|||++.+.. ++.++||||||+++|+|++|+.||..
T Consensus 165 -------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~ 213 (268)
T cd06624 165 -------------------------------CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIE 213 (268)
T ss_pred -------------------------------ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCcc
Confidence 011123788899999986543 78899999999999999999999854
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
...... ..... .........+......+.+++.+||+.+|++|||+.|+++.
T Consensus 214 ~~~~~~--------~~~~~--~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 214 LGEPQA--------AMFKV--GMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred ccChhh--------hHhhh--hhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 211000 00000 00001111122245678899999999999999999999863
No 195
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.4e-36 Score=326.97 Aligned_cols=271 Identities=20% Similarity=0.264 Sum_probs=196.0
Q ss_pred eecccc--CceEEEEEE-eCCCcEEEEEEcCCCc--hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 481 YILGAS--GSSIMYKAV-LEDGTALAVRRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 481 ~~lG~G--~~g~Vy~~~-~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
.+||+| +|++||++. ..+|+.||||++.... ....+.+++|+++++.++||||+++++++..++..++||||+++
T Consensus 4 ~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 83 (327)
T cd08227 4 TVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAY 83 (327)
T ss_pred hhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCC
Confidence 478999 788999998 4678999999997542 33345678899999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|+|.+++...... .+++..++.++.|++.||+|||+.+|+||||||+|||++.++.++++||+..............
T Consensus 84 ~~l~~~~~~~~~~---~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~ 160 (327)
T cd08227 84 GSAKDLICTHFMD---GMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRV 160 (327)
T ss_pred CcHHHHHHhhccC---CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccccccc
Confidence 9999998754322 3899999999999999999999999999999999999999999999999876543211100000
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC--CCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS--IKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~--~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
.........++..|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 161 -----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 211 (327)
T cd08227 161 -----------------------------VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK 211 (327)
T ss_pred -----------------------------cccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 0000112246778999999976 468999999999999999999999986
Q ss_pred ccccCCC---------Ccchhchh-HHHHHH--------HHhh---------hc------CccchHHHHHHHHHHHhhcc
Q 003847 714 DELGQGN---------GLLVEDKN-RAIRLA--------DAAI---------RA------DFEGKEEALLSCFKLGYSCA 760 (791)
Q Consensus 714 ~~~~~~~---------~~~~~~~~-~~~~~~--------~~~~---------~~------~~~~~~~~~~~l~~li~~cl 760 (791)
....... ........ ...+.. +... .. ..+........+.+++.+||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 291 (327)
T cd08227 212 DMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCL 291 (327)
T ss_pred CcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHH
Confidence 4211000 00000000 000000 0000 00 00011123457889999999
Q ss_pred CCCCCCCCCHHHHHHH--hccCCCC
Q 003847 761 SPLPQKRPSMKEALQA--LEKIPSS 783 (791)
Q Consensus 761 ~~dP~~RPs~~evl~~--L~~i~~~ 783 (791)
+.||++|||++|+++. ++++...
T Consensus 292 ~~dP~~Rpt~~ell~~p~f~~~~~~ 316 (327)
T cd08227 292 QRNPDARPSASTLLNHSFFKQIKRR 316 (327)
T ss_pred hhCchhcCCHHHHhcChhhhhcchh
Confidence 9999999999999873 4444433
No 196
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=3.6e-36 Score=320.75 Aligned_cols=257 Identities=22% Similarity=0.280 Sum_probs=198.2
Q ss_pred ceeccccCceEEEEEEeCC-----------------CcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEE
Q 003847 480 AYILGASGSSIMYKAVLED-----------------GTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~-----------------g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~ 541 (791)
.+.||+|+||.||+|...+ +..||+|.+.... ....+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~ 89 (296)
T cd05051 10 VEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCT 89 (296)
T ss_pred cccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence 4689999999999988532 3568999987653 344568899999999999999999999999
Q ss_pred ccCceEEEEeccCCCChhHHHHhhcCCC------CCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCe
Q 003847 542 GVDEKLIIYDFVPNGSLANARYRKMGSS------PCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP 615 (791)
Q Consensus 542 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~------~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~ 615 (791)
.++..++||||+++++|.+++....... ...+++..++.++.|++.||+|||+.+|+||||||+||+++.++.+
T Consensus 90 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~~~~ 169 (296)
T cd05051 90 VDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTI 169 (296)
T ss_pred cCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecCCCce
Confidence 9999999999999999999987654211 1248999999999999999999999999999999999999999999
Q ss_pred EEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhh
Q 003847 616 KIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDV 695 (791)
Q Consensus 616 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDv 695 (791)
+|+|||+++......... ......++..|+|||++.+..++.++||
T Consensus 170 ~l~dfg~~~~~~~~~~~~----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 215 (296)
T cd05051 170 KIADFGMSRNLYSSDYYR----------------------------------VQGRAPLPIRWMAWESVLLGKFTTKSDV 215 (296)
T ss_pred EEccccceeecccCccee----------------------------------ecCcCCCCceecCHHHhhcCCCCccchh
Confidence 999999987654221100 0112236778999999988889999999
Q ss_pred HHHHHHHHHHHh--CCcchhccccCCCCcchhchhHHHHHHHH----hhhcCccchHHHHHHHHHHHhhccCCCCCCCCC
Q 003847 696 YSFGVILLELLT--GKVIVVDELGQGNGLLVEDKNRAIRLADA----AIRADFEGKEEALLSCFKLGYSCASPLPQKRPS 769 (791)
Q Consensus 696 wSlGvil~ellt--G~~pf~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 769 (791)
|||||++|||++ |..||...... ......... ......+.....+.++.+++.+||+.||++|||
T Consensus 216 ~slG~~l~el~~~~~~~p~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt 286 (296)
T cd05051 216 WAFGVTLWEILTLCREQPYEHLTDQ---------QVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPT 286 (296)
T ss_pred hhhHHHHHHHHhcCCCCCCCCcChH---------HHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCC
Confidence 999999999998 55676432110 000111000 000001111123467899999999999999999
Q ss_pred HHHHHHHhcc
Q 003847 770 MKEALQALEK 779 (791)
Q Consensus 770 ~~evl~~L~~ 779 (791)
+.|+++.|++
T Consensus 287 ~~el~~~L~~ 296 (296)
T cd05051 287 FREIHLFLQR 296 (296)
T ss_pred HHHHHHHhcC
Confidence 9999999864
No 197
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.8e-36 Score=329.67 Aligned_cols=252 Identities=21% Similarity=0.251 Sum_probs=188.2
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccC------ceEEEE
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVD------EKLIIY 550 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~~~lv~ 550 (791)
.+.||+|+||.||++.. .+|+.||||++... .......+.+|+.+++.++||||+++++++...+ ..|+||
T Consensus 26 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~ 105 (359)
T cd07876 26 LKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVM 105 (359)
T ss_pred EEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEE
Confidence 46899999999999985 56899999999653 2334567889999999999999999999986543 469999
Q ss_pred eccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCC
Q 003847 551 DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 630 (791)
||+++ +|.+.+.. .+++..+..++.|++.||+|||+.||+||||||+|||++.++.+||+|||+++......
T Consensus 106 e~~~~-~l~~~~~~-------~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 177 (359)
T cd07876 106 ELMDA-NLCQVIHM-------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNF 177 (359)
T ss_pred eCCCc-CHHHHHhc-------cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccccCc
Confidence 99965 56665532 27889999999999999999999999999999999999999999999999987542211
Q ss_pred CCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCc
Q 003847 631 SSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~ 710 (791)
......||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 178 -------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~ 220 (359)
T cd07876 178 -------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSV 220 (359)
T ss_pred -------------------------------------cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCC
Confidence 0112348899999999999999999999999999999999999
Q ss_pred chhccccCCCCc-ch--------hchhHHHHHHHHhh--hcCcc------------------chHHHHHHHHHHHhhccC
Q 003847 711 IVVDELGQGNGL-LV--------EDKNRAIRLADAAI--RADFE------------------GKEEALLSCFKLGYSCAS 761 (791)
Q Consensus 711 pf~~~~~~~~~~-~~--------~~~~~~~~~~~~~~--~~~~~------------------~~~~~~~~l~~li~~cl~ 761 (791)
||.......... .. .-............ ..... ........+.+|+.+||.
T Consensus 221 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~ 300 (359)
T cd07876 221 IFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLV 300 (359)
T ss_pred CCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhc
Confidence 996532100000 00 00000000000000 00000 000123567899999999
Q ss_pred CCCCCCCCHHHHHHH
Q 003847 762 PLPQKRPSMKEALQA 776 (791)
Q Consensus 762 ~dP~~RPs~~evl~~ 776 (791)
.||++|||+.|+++.
T Consensus 301 ~dP~~R~t~~e~l~h 315 (359)
T cd07876 301 IDPDKRISVDEALRH 315 (359)
T ss_pred cCcccCCCHHHHhcC
Confidence 999999999999974
No 198
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=4.2e-36 Score=313.11 Aligned_cols=246 Identities=25% Similarity=0.412 Sum_probs=197.3
Q ss_pred ceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCChh
Q 003847 480 AYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLA 559 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 559 (791)
.+.||+|+||.||++...+++.+|+|.+...... ..++.+|++++++++||||+++++++......++||||+++++|.
T Consensus 9 ~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~ 87 (256)
T cd05112 9 VQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMS-EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLS 87 (256)
T ss_pred EeeecCcccceEEEEEEeCCCeEEEEECCCCCCC-HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHH
Confidence 4689999999999999777889999998754332 357889999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCCc
Q 003847 560 NARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639 (791)
Q Consensus 560 ~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~ 639 (791)
+++..... .++++.+..++.|++.||+|||+.+++||||||+||+++.++.+||+|||++..........
T Consensus 88 ~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~------ 157 (256)
T cd05112 88 DYLRAQRG----KFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTS------ 157 (256)
T ss_pred HHHHhCcc----CCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcccc------
Confidence 98875432 38899999999999999999999999999999999999999999999999987653221100
Q ss_pred cccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhccccC
Q 003847 640 RNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDELGQ 718 (791)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~ 718 (791)
.....++..|+|||.+.+..++.++||||||+++|||++ |+.||.....
T Consensus 158 -----------------------------~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~- 207 (256)
T cd05112 158 -----------------------------STGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN- 207 (256)
T ss_pred -----------------------------cCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH-
Confidence 011224567999999998889999999999999999998 8889854321
Q ss_pred CCCcchhchhHHHHHHHHhhhc-CccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhc
Q 003847 719 GNGLLVEDKNRAIRLADAAIRA-DFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALE 778 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 778 (791)
.++.+..... ........+..+.+|+.+||+.+|++||++.|+++.|.
T Consensus 208 ------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 208 ------------SEVVETINAGFRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred ------------HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 1111111100 00011113567899999999999999999999999874
No 199
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=2.7e-36 Score=321.70 Aligned_cols=260 Identities=22% Similarity=0.259 Sum_probs=195.7
Q ss_pred ceeccccCceEEEEEEeCC---------------CcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEcc
Q 003847 480 AYILGASGSSIMYKAVLED---------------GTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGV 543 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~---------------g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~ 543 (791)
.+.||+|+||.||+++.+. ...||+|.+... .......+.+|++++++++|+||+++++++...
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~ 89 (295)
T cd05097 10 KEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSD 89 (295)
T ss_pred hhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEcCC
Confidence 4579999999999987532 235999999765 333456799999999999999999999999999
Q ss_pred CceEEEEeccCCCChhHHHHhhcCC-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeE
Q 003847 544 DEKLIIYDFVPNGSLANARYRKMGS-------SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616 (791)
Q Consensus 544 ~~~~lv~e~~~~gsL~~~l~~~~~~-------~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~k 616 (791)
+..++||||+++++|.+++...... ....+++..++.++.|++.||+|||+.+++||||||+||+++.++.+|
T Consensus 90 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~~~~k 169 (295)
T cd05097 90 DPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIK 169 (295)
T ss_pred CccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCCCcEE
Confidence 9999999999999999998654211 011378899999999999999999999999999999999999999999
Q ss_pred EeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhH
Q 003847 617 IGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVY 696 (791)
Q Consensus 617 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvw 696 (791)
|+|||++.......... ......++..|+|||++.+..++.++|||
T Consensus 170 l~dfg~~~~~~~~~~~~----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw 215 (295)
T cd05097 170 IADFGMSRNLYSGDYYR----------------------------------IQGRAVLPIRWMAWESILLGKFTTASDVW 215 (295)
T ss_pred ecccccccccccCccee----------------------------------ccCcCcCceeecChhhhccCCcCchhhHH
Confidence 99999987653211100 00112356789999999888899999999
Q ss_pred HHHHHHHHHHh--CCcchhccccCCCCcchhchhHHHHHHHHhhhcC-ccchHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 003847 697 SFGVILLELLT--GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRAD-FEGKEEALLSCFKLGYSCASPLPQKRPSMKEA 773 (791)
Q Consensus 697 SlGvil~ellt--G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 773 (791)
||||++|||++ |..||....... .+.. ............ .......+..+.+|+.+||+.||++||++++|
T Consensus 216 SlG~~l~el~~~~~~~p~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i 289 (295)
T cd05097 216 AFGVTLWEMFTLCKEQPYSLLSDEQ---VIEN---TGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKI 289 (295)
T ss_pred HHHHHHHHHHHcCCCCCCcccChHH---HHHH---HHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHH
Confidence 99999999998 455664421100 0000 011111110000 01111234678999999999999999999999
Q ss_pred HHHhcc
Q 003847 774 LQALEK 779 (791)
Q Consensus 774 l~~L~~ 779 (791)
++.|++
T Consensus 290 ~~~l~~ 295 (295)
T cd05097 290 HHFLRE 295 (295)
T ss_pred HHHHhC
Confidence 999864
No 200
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=2.4e-36 Score=338.56 Aligned_cols=255 Identities=18% Similarity=0.282 Sum_probs=184.6
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEcc--------CceEEE
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGV--------DEKLII 549 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--------~~~~lv 549 (791)
..++||+|+||.||+|.. .+++.||||++.... ....+|+.++++++||||+++++++... ...++|
T Consensus 70 ~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lv 145 (440)
T PTZ00036 70 LGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVV 145 (440)
T ss_pred EeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEE
Confidence 457899999999999995 568999999986542 2345799999999999999999987542 135689
Q ss_pred EeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCC-CeEEeccCcccccCC
Q 003847 550 YDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDM-EPKIGDFGLERLVTG 628 (791)
Q Consensus 550 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~-~~kL~DFGla~~~~~ 628 (791)
|||++ ++|.+++...... ...+++..++.++.||+.||+|||+.+|+||||||+|||++.++ .+||+|||+++.+..
T Consensus 146 mE~~~-~~l~~~~~~~~~~-~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~ 223 (440)
T PTZ00036 146 MEFIP-QTVHKYMKHYARN-NHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLA 223 (440)
T ss_pred EecCC-ccHHHHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccchhccC
Confidence 99997 4777766543211 12489999999999999999999999999999999999999664 699999999986542
Q ss_pred CCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHh
Q 003847 629 DTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLT 707 (791)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~ellt 707 (791)
... .....||+.|+|||++.+ ..++.++|||||||++|||++
T Consensus 224 ~~~-------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ellt 266 (440)
T PTZ00036 224 GQR-------------------------------------SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMIL 266 (440)
T ss_pred CCC-------------------------------------cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHh
Confidence 111 112358899999999865 468999999999999999999
Q ss_pred CCcchhccccCCCCcch-h----chhHHHHHHHHhhh----cCcc-------chHHHHHHHHHHHhhccCCCCCCCCCHH
Q 003847 708 GKVIVVDELGQGNGLLV-E----DKNRAIRLADAAIR----ADFE-------GKEEALLSCFKLGYSCASPLPQKRPSMK 771 (791)
Q Consensus 708 G~~pf~~~~~~~~~~~~-~----~~~~~~~~~~~~~~----~~~~-------~~~~~~~~l~~li~~cl~~dP~~RPs~~ 771 (791)
|++||.+.........+ . ..........+... .... .+...+.++.+|+.+||..||.+|||+.
T Consensus 267 G~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~ 346 (440)
T PTZ00036 267 GYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPI 346 (440)
T ss_pred CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHH
Confidence 99999654221000000 0 00000000000000 0000 0011235788999999999999999999
Q ss_pred HHHHH
Q 003847 772 EALQA 776 (791)
Q Consensus 772 evl~~ 776 (791)
|+++.
T Consensus 347 e~l~h 351 (440)
T PTZ00036 347 EALAD 351 (440)
T ss_pred HHhCC
Confidence 99854
No 201
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.4e-36 Score=320.88 Aligned_cols=245 Identities=23% Similarity=0.352 Sum_probs=199.0
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
...||.|++|.||++. ..+++.||+|.+........+.+.+|+.+++.++|+||+++++++...+..++|+||+++++|
T Consensus 24 ~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 103 (296)
T cd06655 24 YEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSL 103 (296)
T ss_pred EEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCcH
Confidence 3579999999999998 467899999999766555567889999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++... .+++.++..++.|++.||+|||+.|++||||||+||+++.++.+||+|||++.........
T Consensus 104 ~~~~~~~------~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~------ 171 (296)
T cd06655 104 TDVVTET------CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSK------ 171 (296)
T ss_pred HHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhccccccc------
Confidence 9987643 3899999999999999999999999999999999999999999999999998765422110
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccccC
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQ 718 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~ 718 (791)
.....|+..|+|||.+.+..++.++|||||||++|+|++|+.||.....
T Consensus 172 ------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~- 220 (296)
T cd06655 172 ------------------------------RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP- 220 (296)
T ss_pred ------------------------------CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-
Confidence 1123478889999999988899999999999999999999999965321
Q ss_pred CCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 719 GNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
....... .................+.+++.+||..||++||++.++++.
T Consensus 221 --------~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 221 --------LRALYLI-ATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred --------HHHHHHH-HhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 0011111 111111111222345678899999999999999999999864
No 202
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.6e-36 Score=325.70 Aligned_cols=268 Identities=22% Similarity=0.307 Sum_probs=205.6
Q ss_pred ccchHHHhhhcceeccccCceEEEEEEeC--------CCcEEEEEEcCCCc-hhhHHHHHHHHHHHhcc-CCCCccceee
Q 003847 469 ELELETLLKASAYILGASGSSIMYKAVLE--------DGTALAVRRIGENS-VDRFRDFETQVRVIAKL-VHPNLVRIRG 538 (791)
Q Consensus 469 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~--------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~ 538 (791)
++++....+.....||+|+||.||+|... .+..||+|.++... ....+++.+|+++++++ +|+||+++++
T Consensus 6 ~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~ 85 (334)
T cd05100 6 KWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLG 85 (334)
T ss_pred ccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeE
Confidence 34444444555678999999999999732 12479999987543 33456889999999999 7999999999
Q ss_pred EEEccCceEEEEeccCCCChhHHHHhhcCC-----------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCe
Q 003847 539 FYWGVDEKLIIYDFVPNGSLANARYRKMGS-----------SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNV 607 (791)
Q Consensus 539 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NI 607 (791)
++...+..+++|||+++|+|.+++...... ....+++.++..++.|++.||+|||++||+||||||+||
T Consensus 86 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni 165 (334)
T cd05100 86 ACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNV 165 (334)
T ss_pred EEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceE
Confidence 999999999999999999999998764311 122488999999999999999999999999999999999
Q ss_pred EecCCCCeEEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC
Q 003847 608 LLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI 687 (791)
Q Consensus 608 Ll~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~ 687 (791)
+++.++.+||+|||+++......... ......++..|+|||++.+.
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~~----------------------------------~~~~~~~~~~y~aPE~~~~~ 211 (334)
T cd05100 166 LVTEDNVMKIADFGLARDVHNIDYYK----------------------------------KTTNGRLPVKWMAPEALFDR 211 (334)
T ss_pred EEcCCCcEEECCcccceecccccccc----------------------------------cccCCCcCceEcCHHHhccC
Confidence 99999999999999988654221100 00111245679999999998
Q ss_pred CCCCchhhHHHHHHHHHHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCC
Q 003847 688 KPNPKWDVYSFGVILLELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQK 766 (791)
Q Consensus 688 ~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 766 (791)
.++.++||||||+++|||++ |..||..... ............. +........+.+++.+||+.+|++
T Consensus 212 ~~~~~~Di~slG~il~el~~~g~~p~~~~~~----------~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~~p~~ 279 (334)
T cd05100 212 VYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV----------EELFKLLKEGHRM--DKPANCTHELYMIMRECWHAVPSQ 279 (334)
T ss_pred CcCchhhhHHHHHHHHHHHhcCCCCCCCCCH----------HHHHHHHHcCCCC--CCCCCCCHHHHHHHHHHcccChhh
Confidence 99999999999999999998 7778754211 1111111111111 111224567889999999999999
Q ss_pred CCCHHHHHHHhccCCC
Q 003847 767 RPSMKEALQALEKIPS 782 (791)
Q Consensus 767 RPs~~evl~~L~~i~~ 782 (791)
||++.|+++.|+++..
T Consensus 280 Rps~~ell~~l~~~~~ 295 (334)
T cd05100 280 RPTFKQLVEDLDRVLT 295 (334)
T ss_pred CcCHHHHHHHHHHHhh
Confidence 9999999999998863
No 203
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=5.4e-36 Score=317.15 Aligned_cols=247 Identities=21% Similarity=0.270 Sum_probs=196.4
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
...||+|+||.||++... ++..+|+|.+........+.+.+|+++++.++|+||+++++++...+..++||||+++++|
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l 89 (282)
T cd06643 10 IGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAV 89 (282)
T ss_pred HhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCcH
Confidence 356999999999999954 5789999999776666667889999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
..++..... ++++..+..++.|++.||+|||+.|++||||||+||+++.++.+||+|||++........
T Consensus 90 ~~~~~~~~~----~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~------- 158 (282)
T cd06643 90 DAVMLELER----PLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ------- 158 (282)
T ss_pred HHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccccc-------
Confidence 887765322 489999999999999999999999999999999999999999999999999875432110
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc-----CCCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR-----SIKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~-----~~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
......|+..|+|||++. +..++.++|||||||++|||++|+.||.
T Consensus 159 -----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~ 209 (282)
T cd06643 159 -----------------------------RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHH 209 (282)
T ss_pred -----------------------------ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCcc
Confidence 011234888999999983 4557889999999999999999999986
Q ss_pred ccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 714 DELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
.... .......... .......+......+.+++.+||+.||.+||++.++++.
T Consensus 210 ~~~~---------~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 210 ELNP---------MRVLLKIAKS-EPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred ccCH---------HHHHHHHhhc-CCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 4311 0111111110 011111122245678899999999999999999999864
No 204
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.8e-36 Score=322.36 Aligned_cols=245 Identities=21% Similarity=0.327 Sum_probs=198.2
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
...||+|+||.||++.. .++..||||.+........+.+.+|+.++++++|+||+++++.+...+..++||||+++++|
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L 106 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL 106 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcH
Confidence 35699999999999985 46899999999766555667789999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++... .+++.++..++.||+.||+|||+.+|+||||||+||+++.++.+||+|||++........
T Consensus 107 ~~~~~~~------~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~------- 173 (292)
T cd06658 107 TDIVTHT------RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP------- 173 (292)
T ss_pred HHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc-------
Confidence 9987542 388999999999999999999999999999999999999999999999999875432110
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccccC
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQ 718 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~ 718 (791)
......|+..|+|||.+.+..++.++||||||+++|||++|+.||......
T Consensus 174 -----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~ 224 (292)
T cd06658 174 -----------------------------KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL 224 (292)
T ss_pred -----------------------------cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 011234788999999998888999999999999999999999998643110
Q ss_pred CCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 719 GNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
.......................+.+++.+|+..||.+|||++|+++.
T Consensus 225 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 225 ----------QAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred ----------HHHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 001111111111111112244568889999999999999999999975
No 205
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=4.1e-36 Score=319.10 Aligned_cols=254 Identities=26% Similarity=0.394 Sum_probs=198.5
Q ss_pred ceeccccCceEEEEEEeC------CCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEec
Q 003847 480 AYILGASGSSIMYKAVLE------DGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDF 552 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 552 (791)
...||+|+||.||+|... ++..||+|++.... ....+++.+|+.++++++||||+++++++...+..++||||
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 89 (288)
T cd05050 10 VRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFEY 89 (288)
T ss_pred cccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEEEec
Confidence 457899999999999853 47899999997653 33456799999999999999999999999999999999999
Q ss_pred cCCCChhHHHHhhcC-----------------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCe
Q 003847 553 VPNGSLANARYRKMG-----------------SSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP 615 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~-----------------~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~ 615 (791)
+++++|.+++..... .....+++.+++.++.|++.||+|||+.+++||||||+||+++.++.+
T Consensus 90 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~ 169 (288)
T cd05050 90 MAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVV 169 (288)
T ss_pred CCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCCce
Confidence 999999999875421 111247889999999999999999999999999999999999999999
Q ss_pred EEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhh
Q 003847 616 KIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDV 695 (791)
Q Consensus 616 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDv 695 (791)
||+|||++..+........ .....++..|+|||.+.+..++.++||
T Consensus 170 ~l~dfg~~~~~~~~~~~~~----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv 215 (288)
T cd05050 170 KIADFGLSRNIYSADYYKA----------------------------------SENDAIPIRWMPPESIFYNRYTTESDV 215 (288)
T ss_pred EECccccceecccCccccc----------------------------------cCCCccChhhcCHHHHhcCCCCchhHH
Confidence 9999999876532211000 001124566999999998899999999
Q ss_pred HHHHHHHHHHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 003847 696 YSFGVILLELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEAL 774 (791)
Q Consensus 696 wSlGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 774 (791)
|||||++|||++ |..||.+.... .....+.+... .......+.++.+++.+||+.||++|||+.|++
T Consensus 216 ~slG~il~el~~~~~~p~~~~~~~---------~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~ 283 (288)
T cd05050 216 WAYGVVLWEIFSYGMQPYYGMAHE---------EVIYYVRDGNV---LSCPDNCPLELYNLMRLCWSKLPSDRPSFASIN 283 (288)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCHH---------HHHHHHhcCCC---CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHH
Confidence 999999999998 77787542110 01111111111 111222456789999999999999999999999
Q ss_pred HHhcc
Q 003847 775 QALEK 779 (791)
Q Consensus 775 ~~L~~ 779 (791)
+.|++
T Consensus 284 ~~l~~ 288 (288)
T cd05050 284 RILQR 288 (288)
T ss_pred HHhhC
Confidence 99974
No 206
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-37 Score=323.18 Aligned_cols=266 Identities=29% Similarity=0.411 Sum_probs=220.0
Q ss_pred cccchHHHhhhcceeccccCceEEEEEEeCC-CcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCce
Q 003847 468 KELELETLLKASAYILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEK 546 (791)
Q Consensus 468 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 546 (791)
..++++.--....+.||.|.||.||.|.++. .-.||||.++.+... .++|..|+.+|+.++|||+|+++|+|..+..+
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMe-veEFLkEAAvMKeikHpNLVqLLGVCT~EpPF 338 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF 338 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchh-HHHHHHHHHHHHhhcCccHHHHhhhhccCCCe
Confidence 3455555545567899999999999999654 678999999988664 58999999999999999999999999999999
Q ss_pred EEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCccccc
Q 003847 547 LIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLV 626 (791)
Q Consensus 547 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 626 (791)
|||+|||..|+|.+|+.+..... ++--..+.++.||..|++||..+++|||||...|.|+.++..||++|||+++++
T Consensus 339 YIiTEfM~yGNLLdYLRecnr~e---v~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlM 415 (1157)
T KOG4278|consen 339 YIITEFMCYGNLLDYLRECNRSE---VPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLM 415 (1157)
T ss_pred EEEEecccCccHHHHHHHhchhh---cchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhh
Confidence 99999999999999999876542 677788899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHH
Q 003847 627 TGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELL 706 (791)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ell 706 (791)
..+..+...+.. -.+.|.|||-+....++.|+|||+|||+|||+.
T Consensus 416 tgDTYTAHAGAK-----------------------------------FPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIA 460 (1157)
T KOG4278|consen 416 TGDTYTAHAGAK-----------------------------------FPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIA 460 (1157)
T ss_pred cCCceecccCcc-----------------------------------CcccccCcccccccccccchhhHHHHHHHHHHH
Confidence 876654433211 123499999999999999999999999999999
Q ss_pred h-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCCC
Q 003847 707 T-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSSP 784 (791)
Q Consensus 707 t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 784 (791)
| |..||.+..- ..+..+.....+ ++.++.++..+++|++.||+..|.+||++.|+-+.++.+-.+.
T Consensus 461 TYGMsPYPGidl----------SqVY~LLEkgyR--M~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~s 527 (1157)
T KOG4278|consen 461 TYGMSPYPGIDL----------SQVYGLLEKGYR--MDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSS 527 (1157)
T ss_pred hcCCCCCCCccH----------HHHHHHHhcccc--ccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhccc
Confidence 8 5558765321 123333333322 2344557889999999999999999999999999998875543
No 207
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=2.2e-36 Score=320.56 Aligned_cols=247 Identities=19% Similarity=0.240 Sum_probs=195.5
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
..+||+|+||.||++.. .+++.||||.+.... ....+.+.+|+.++++++|++|+++++.+...+..++||||+++
T Consensus 5 ~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g 84 (285)
T cd05630 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNG 84 (285)
T ss_pred eEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCC
Confidence 46799999999999994 578999999986532 22234577899999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
++|.+++...... .+++..+..++.|++.||+|||+.+|+||||||+||+++.++.++|+|||++........
T Consensus 85 ~~L~~~l~~~~~~---~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~---- 157 (285)
T cd05630 85 GDLKFHIYHMGEA---GFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT---- 157 (285)
T ss_pred CcHHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc----
Confidence 9999988654322 389999999999999999999999999999999999999999999999999875432110
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
.....|+..|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 158 ---------------------------------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~ 204 (285)
T cd05630 158 ---------------------------------IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQR 204 (285)
T ss_pred ---------------------------------ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCC
Confidence 11234899999999999989999999999999999999999999653
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPS-----MKEALQ 775 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 775 (791)
..... ........+.. ...+ .......+.+++.+||+.||++||| ++|+++
T Consensus 205 ~~~~~------~~~~~~~~~~~-~~~~--~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 205 KKKIK------REEVERLVKEV-QEEY--SEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred Cccch------HHHHHhhhhhh-hhhc--CccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 21100 00111111111 1111 1123456789999999999999999 888886
No 208
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.6e-37 Score=323.61 Aligned_cols=258 Identities=22% Similarity=0.268 Sum_probs=202.8
Q ss_pred cchHHHhhhcceeccccCceEEEEEEeCCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccC-CCCccceeeEEEccCce
Q 003847 470 LELETLLKASAYILGASGSSIMYKAVLEDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLV-HPNLVRIRGFYWGVDEK 546 (791)
Q Consensus 470 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~ 546 (791)
+.+..-.+..-+.||+||.+.||++...+.+.||+|++... .......|.+|+..|.+|+ |.+||++++|-..++..
T Consensus 356 i~Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~l 435 (677)
T KOG0596|consen 356 IKVKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYL 435 (677)
T ss_pred EEECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceE
Confidence 44444455556789999999999999888899999988543 4445678999999999995 99999999999999999
Q ss_pred EEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCccccc
Q 003847 547 LIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLV 626 (791)
Q Consensus 547 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 626 (791)
|+||||= ..+|..++..+... ++.-.++.+..||+.|+.++|..||||.||||.|+|+- +|.+||+|||+|..+
T Consensus 436 YmvmE~G-d~DL~kiL~k~~~~----~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI 509 (677)
T KOG0596|consen 436 YMVMECG-DIDLNKILKKKKSI----DPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAI 509 (677)
T ss_pred EEEeecc-cccHHHHHHhccCC----CchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhccc
Confidence 9999965 67999999877653 33237888999999999999999999999999999995 579999999999988
Q ss_pred CCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC-----------CCCCchhh
Q 003847 627 TGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI-----------KPNPKWDV 695 (791)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-----------~~~~~sDv 695 (791)
..+.... .....+||+.||+||.+... +.+.++||
T Consensus 510 ~~DTTsI----------------------------------~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDv 555 (677)
T KOG0596|consen 510 QPDTTSI----------------------------------VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDV 555 (677)
T ss_pred Cccccce----------------------------------eeccccCcccccCHHHHhhccccccCCCcceeecCccch
Confidence 7554322 12345799999999998532 25689999
Q ss_pred HHHHHHHHHHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 696 YSFGVILLELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 696 wSlGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
||+|||||+|+.|+.||..... ....+..+.++.-.-.++... ...++++++..||..||++||++.|+|+
T Consensus 556 WSLGCILYqMvYgktPf~~~~n--------~~aKl~aI~~P~~~Iefp~~~-~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 556 WSLGCILYQMVYGKTPFGQIIN--------QIAKLHAITDPNHEIEFPDIP-ENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred hhhhhHHHHHHhcCCchHHHHH--------HHHHHHhhcCCCccccccCCC-CchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 9999999999999999965321 112233344442222222221 2234899999999999999999999987
Q ss_pred H
Q 003847 776 A 776 (791)
Q Consensus 776 ~ 776 (791)
.
T Consensus 627 h 627 (677)
T KOG0596|consen 627 H 627 (677)
T ss_pred C
Confidence 4
No 209
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.5e-36 Score=325.93 Aligned_cols=255 Identities=19% Similarity=0.225 Sum_probs=190.7
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCch-hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSV-DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
.+.||+|+||.||+|+. .+++.||+|.++.... .....+.+|++++++++||||+++++++..++..++||||+++ +
T Consensus 11 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~ 89 (309)
T cd07872 11 LEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDK-D 89 (309)
T ss_pred EEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCCC-C
Confidence 46899999999999995 4688999999875422 2234677899999999999999999999999999999999975 8
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++..... .+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++.......
T Consensus 90 l~~~~~~~~~----~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~------ 159 (309)
T cd07872 90 LKQYMDDCGN----IMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK------ 159 (309)
T ss_pred HHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCcc------
Confidence 8887765432 378999999999999999999999999999999999999999999999999875432111
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
......+|+.|+|||++.+ ..++.++|||||||++|||+||+.||....
T Consensus 160 ------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~ 209 (309)
T cd07872 160 ------------------------------TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGST 209 (309)
T ss_pred ------------------------------ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 0112347888999999865 467999999999999999999999996532
Q ss_pred cCCCCcch--------hchhH----HHHHHHHhhhcC-----ccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 717 GQGNGLLV--------EDKNR----AIRLADAAIRAD-----FEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 717 ~~~~~~~~--------~~~~~----~~~~~~~~~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
.......+ .+.+. .....+...... ..........+.+++.+||+.||++|||+.|+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 210 VEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 21000000 00000 000000000000 0000113456789999999999999999999987
No 210
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.4e-36 Score=317.11 Aligned_cols=246 Identities=22% Similarity=0.286 Sum_probs=195.1
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
...||+|+||.||+|+. .+++.||+|.++.........+.+|+.+++.++||||+++++++...+..++||||+++++|
T Consensus 14 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L 93 (267)
T cd06645 14 IQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSL 93 (267)
T ss_pred HHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCcH
Confidence 45799999999999984 56899999998766555556788999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++.... .+++.+++.++.|++.||+|||+.|++|+||||+||+++.++.+||+|||++........
T Consensus 94 ~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~------- 161 (267)
T cd06645 94 QDIYHVTG-----PLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIA------- 161 (267)
T ss_pred HHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCccc-------
Confidence 99886543 389999999999999999999999999999999999999999999999999876532110
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc---CCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR---SIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~---~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
......|+..|+|||++. ...++.++|||||||++|||++|+.||...
T Consensus 162 -----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~ 212 (267)
T cd06645 162 -----------------------------KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDL 212 (267)
T ss_pred -----------------------------ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccc
Confidence 011234888999999974 456889999999999999999999998543
Q ss_pred ccCCCCcchhchhHHHHHHHHhhh-cCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIR-ADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
.... ........... ............+.+++.+||+.+|++||+++++++
T Consensus 213 ~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 213 HPMR---------ALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred cchh---------hHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 2110 00000000000 000001113356789999999999999999999875
No 211
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=9.5e-37 Score=334.46 Aligned_cols=276 Identities=18% Similarity=0.188 Sum_probs=196.0
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC---chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN---SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
.+.||+|+||.||+++. .+++.||||++... .......+.+|+.++.+++|+||+++++.+.+.+..|+||||+++
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~g 85 (360)
T cd05627 6 LKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPG 85 (360)
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCC
Confidence 46899999999999995 46899999999653 223346788899999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|+|.+++.... .+++..++.++.|++.||+|||+.||+||||||+|||++.++.+||+|||+++.+.........
T Consensus 86 g~L~~~l~~~~-----~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~ 160 (360)
T cd05627 86 GDMMTLLMKKD-----TLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFY 160 (360)
T ss_pred ccHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccc
Confidence 99999987643 3899999999999999999999999999999999999999999999999998865432111100
Q ss_pred CCCccccCCcccccccccccCCC-----CCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLG-----PGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~ 710 (791)
........ ...++.... ..............+||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 161 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~ 234 (360)
T cd05627 161 RNLTHNPP------SDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (360)
T ss_pred cccccCCc------ccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCC
Confidence 00000000 000000000 0000000111234579999999999999999999999999999999999999
Q ss_pred chhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCC---HHHHHHH
Q 003847 711 IVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPS---MKEALQA 776 (791)
Q Consensus 711 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~~ 776 (791)
||...... .....+........++........+.+++.+|+ .||.+|++ +.|+++.
T Consensus 235 Pf~~~~~~---------~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 235 PFCSETPQ---------ETYRKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCCCCCHH---------HHHHHHHcCCCceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcC
Confidence 99654211 011111110000111111113456778888876 49999985 5666543
No 212
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=7.4e-36 Score=317.09 Aligned_cols=255 Identities=21% Similarity=0.292 Sum_probs=198.0
Q ss_pred ceeccccCceEEEEEEeC------CCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEec
Q 003847 480 AYILGASGSSIMYKAVLE------DGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDF 552 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 552 (791)
...||+|+||.||+|..+ .+..||+|.+.... ......+.+|+.++++++|+||+++++++...+..++||||
T Consensus 11 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 90 (288)
T cd05061 11 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMEL 90 (288)
T ss_pred eeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEeC
Confidence 468999999999999743 25689999987543 23345678899999999999999999999999999999999
Q ss_pred cCCCChhHHHHhhcCC-----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccC
Q 003847 553 VPNGSLANARYRKMGS-----SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVT 627 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~ 627 (791)
+++|+|.+++...... .....++..+..++.|++.||+|||+++|+||||||+||+++.++.+||+|||+++.+.
T Consensus 91 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~ 170 (288)
T cd05061 91 MAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY 170 (288)
T ss_pred CCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcCCcccccc
Confidence 9999999999764321 11236778899999999999999999999999999999999999999999999988653
Q ss_pred CCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh
Q 003847 628 GDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT 707 (791)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt 707 (791)
...... ......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 171 ~~~~~~----------------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~ 216 (288)
T cd05061 171 ETDYYR----------------------------------KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 216 (288)
T ss_pred cccccc----------------------------------ccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHh
Confidence 221100 0011225667999999998889999999999999999999
Q ss_pred -CCcchhccccCCCCcchhchhHHHHHHHHhhhcC-ccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 708 -GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRAD-FEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 708 -G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
|+.||..... .++.+....+. ..........+.+++.+|++.||++|||+.++++.|++..
T Consensus 217 ~~~~p~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 217 LAEQPYQGLSN-------------EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred CCCCCCCCCCH-------------HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 6778754211 11111111111 1112223567899999999999999999999999998753
No 213
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=4.4e-36 Score=312.81 Aligned_cols=245 Identities=22% Similarity=0.295 Sum_probs=197.6
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
.+.||+|+||.||++.. .+++.||+|.++.. .....+.+.+|+.++++++|+||+++++.+...+..++||||+++++
T Consensus 5 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 84 (255)
T cd08219 5 LRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGD 84 (255)
T ss_pred EEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCCc
Confidence 46899999999999994 46899999998643 33345678899999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++...... .+++..+..++.|++.||+|||+.||+|+||||+||++++++.++++|||.+........
T Consensus 85 l~~~~~~~~~~---~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~------ 155 (255)
T cd08219 85 LMQKIKLQRGK---LFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA------ 155 (255)
T ss_pred HHHHHHhccCC---CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccccc------
Confidence 99988654322 378999999999999999999999999999999999999999999999999876532111
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELG 717 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~ 717 (791)
......|++.|+|||++.+..++.++|+||||+++|+|++|+.||.....
T Consensus 156 ------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~ 205 (255)
T cd08219 156 ------------------------------YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW 205 (255)
T ss_pred ------------------------------ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH
Confidence 01123478889999999988899999999999999999999999964311
Q ss_pred CCCCcchhchhHHHHHHHHhhhcCcc-chHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 718 QGNGLLVEDKNRAIRLADAAIRADFE-GKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
.........+... ........+.+++.+||+.||++||++.|++..
T Consensus 206 -------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 206 -------------KNLILKVCQGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred -------------HHHHHHHhcCCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 0111111111111 112245568899999999999999999999875
No 214
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=4.4e-36 Score=315.37 Aligned_cols=252 Identities=25% Similarity=0.369 Sum_probs=197.6
Q ss_pred eccccCceEEEEEEeCC-------CcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEecc
Q 003847 482 ILGASGSSIMYKAVLED-------GTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~~~~-------g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
.||+|+||.||+|+..+ ++.||||.+.... ......+.+|+.++++++||||+++++++...+..++||||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM 81 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence 68999999999998532 2689999986543 234567899999999999999999999999999999999999
Q ss_pred CCCChhHHHHhhcCC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCC-----CeEEeccCccccc
Q 003847 554 PNGSLANARYRKMGS--SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDM-----EPKIGDFGLERLV 626 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~-----~~kL~DFGla~~~ 626 (791)
++++|.+++...... ....+++.++..++.|++.||+|||+.+++|+||||+||+++.++ .+||+|||+++.+
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~ 161 (269)
T cd05044 82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDI 161 (269)
T ss_pred CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccccccc
Confidence 999999998754321 122478999999999999999999999999999999999999877 8999999998765
Q ss_pred CCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHH
Q 003847 627 TGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELL 706 (791)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ell 706 (791)
........ .....++..|+|||++.+..++.++|||||||++|||+
T Consensus 162 ~~~~~~~~----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ell 207 (269)
T cd05044 162 YKSDYYRK----------------------------------EGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEIL 207 (269)
T ss_pred cccccccc----------------------------------CcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHH
Confidence 42211000 01122567799999999989999999999999999999
Q ss_pred h-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhcc
Q 003847 707 T-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779 (791)
Q Consensus 707 t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 779 (791)
+ |+.||...... ......... .........+..+.+++.+||..+|++||+++++++.|++
T Consensus 208 t~g~~p~~~~~~~----------~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 208 TLGQQPYPALNNQ----------EVLQHVTAG--GRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred HcCCCCCcccCHH----------HHHHHHhcC--CccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 8 89888543110 111111111 1111222355678899999999999999999999999874
No 215
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=4.5e-36 Score=317.78 Aligned_cols=262 Identities=23% Similarity=0.339 Sum_probs=202.7
Q ss_pred eeccccCceEEEEEEeC-----CCcEEEEEEcCCCchh-hHHHHHHHHHHHhccCCCCccceeeEEEc--cCceEEEEec
Q 003847 481 YILGASGSSIMYKAVLE-----DGTALAVRRIGENSVD-RFRDFETQVRVIAKLVHPNLVRIRGFYWG--VDEKLIIYDF 552 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~-----~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--~~~~~lv~e~ 552 (791)
+.||+|+||.||+++.. +++.||||++...... ..+.+.+|++++++++|+||+++++++.. ....++||||
T Consensus 10 ~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 89 (284)
T cd05038 10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEY 89 (284)
T ss_pred eeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEec
Confidence 68999999999999853 3689999999866443 46789999999999999999999999887 5578999999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCC
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 632 (791)
+++++|.+++..... .+++..+..++.|++.||+|||+.|++||||||+||+++.++.+||+|||++.........
T Consensus 90 ~~~~~l~~~l~~~~~----~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 165 (284)
T cd05038 90 LPSGSLRDYLQRHRD----QINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDY 165 (284)
T ss_pred CCCCCHHHHHHhCcc----ccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCcc
Confidence 999999999876542 3899999999999999999999999999999999999999999999999999876532211
Q ss_pred CcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcch
Q 003847 633 SKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIV 712 (791)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf 712 (791)
... .....++..|+|||.+.+..++.++||||||+++|||++|+.|+
T Consensus 166 ~~~---------------------------------~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~ 212 (284)
T cd05038 166 YYV---------------------------------KEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPS 212 (284)
T ss_pred eec---------------------------------cCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCc
Confidence 000 00112455699999998888999999999999999999999987
Q ss_pred hccccCCCCcch-----hchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 713 VDELGQGNGLLV-----EDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 713 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
............ .......+....... .+.......++.+++.+||+.+|++||++.||+++|++|.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i~ 284 (284)
T cd05038 213 QSPPAEFLRMIGIAQGQMIVTRLLELLKEGER--LPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRLR 284 (284)
T ss_pred ccccchhccccccccccccHHHHHHHHHcCCc--CCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhcC
Confidence 553322111000 000111111111111 1112224467899999999999999999999999999874
No 216
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=7.2e-36 Score=313.85 Aligned_cols=255 Identities=23% Similarity=0.392 Sum_probs=199.2
Q ss_pred cceeccccCceEEEEEEeC-CC---cEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEecc
Q 003847 479 SAYILGASGSSIMYKAVLE-DG---TALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~-~g---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
..+.||+|+||.||+|... ++ ..||||.+... .....++|..|+.++++++||||+++++++...+..++||||+
T Consensus 8 ~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~ 87 (269)
T cd05065 8 IEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFM 87 (269)
T ss_pred EEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEecC
Confidence 3568999999999999954 33 36999999764 3444578999999999999999999999999999999999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
++++|.+++..... .+++.+++.++.|++.||+|||+.|++||||||+||+++.++.+||+|||++..........
T Consensus 88 ~~~~L~~~l~~~~~----~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~ 163 (269)
T cd05065 88 ENGALDSFLRQNDG----QFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP 163 (269)
T ss_pred CCCcHHHHHhhCCC----CCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCcccc
Confidence 99999998876432 38999999999999999999999999999999999999999999999999987654322110
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcch
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIV 712 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf 712 (791)
.. ........+..|+|||++.+..++.++|||||||++|||++ |..||
T Consensus 164 ~~-------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~ 212 (269)
T cd05065 164 TY-------------------------------TSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 212 (269)
T ss_pred cc-------------------------------ccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCC
Confidence 00 00001112456999999998899999999999999999886 99898
Q ss_pred hccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 713 VDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
...... .......... ..+...+.+..+.+++.+||+.+|.+||++.+++..|+++
T Consensus 213 ~~~~~~----------~~~~~i~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 213 WDMSNQ----------DVINAIEQDY--RLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred CCCCHH----------HHHHHHHcCC--cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 543110 1111111110 1111223456788999999999999999999999999864
No 217
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.9e-36 Score=320.59 Aligned_cols=244 Identities=23% Similarity=0.339 Sum_probs=198.2
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
.+.||+|+||.||++.. .+++.||+|.+........+.+.+|+.+++.++|+||+++++++...+..++||||+++++|
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 103 (297)
T cd06656 24 FEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 103 (297)
T ss_pred eeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCCCH
Confidence 46799999999999994 57999999999766555567788999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++... .+++..+..++.|++.||.|||+.||+||||||+||+++.++.+||+|||++.........
T Consensus 104 ~~~~~~~------~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~------ 171 (297)
T cd06656 104 TDVVTET------CMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK------ 171 (297)
T ss_pred HHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccC------
Confidence 9988643 2889999999999999999999999999999999999999999999999998765322110
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccccC
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQ 718 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~ 718 (791)
.....|++.|+|||.+.+..++.++|||||||++|+|++|+.||......
T Consensus 172 ------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~ 221 (297)
T cd06656 172 ------------------------------RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL 221 (297)
T ss_pred ------------------------------cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcc
Confidence 11234788899999999888999999999999999999999999654221
Q ss_pred CCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 719 GNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
........ ...............+.+++.+||..+|++||+++++++
T Consensus 222 ~~~~~~~~----------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 222 RALYLIAT----------NGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred hheeeecc----------CCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11000000 000011112224456788999999999999999999998
No 218
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=5e-36 Score=315.04 Aligned_cols=253 Identities=21% Similarity=0.245 Sum_probs=188.3
Q ss_pred eccccCceEEEEEEeCC---CcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 482 ILGASGSSIMYKAVLED---GTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~~~~---g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
.||+|+||.||+|...+ ...+|+|.+.... ......+.+|+++++.++|+||+++++++......++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999997433 4578999886543 3334678899999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++...........++.....++.||+.||+|||+.+|+||||||+|||++.++.+||+|||++..........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~---- 157 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI---- 157 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchhee----
Confidence 9999977543322235678889999999999999999999999999999999999999999999986543211000
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc-------CCCCCCchhhHHHHHHHHHHHh-CC
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR-------SIKPNPKWDVYSFGVILLELLT-GK 709 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~-------~~~~~~~sDvwSlGvil~ellt-G~ 709 (791)
......++..|+|||++. ...++.++|||||||++|||++ |.
T Consensus 158 ------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~ 207 (269)
T cd05042 158 ------------------------------TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAAD 207 (269)
T ss_pred ------------------------------ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCC
Confidence 001123567799999874 3456889999999999999999 67
Q ss_pred cchhccccCCCCcchhchhHHHHHHHHhh-h-cCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhc
Q 003847 710 VIVVDELGQGNGLLVEDKNRAIRLADAAI-R-ADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALE 778 (791)
Q Consensus 710 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 778 (791)
.||..... ............ . ............+.+++..|+ .||++||+++||++.|.
T Consensus 208 ~p~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 208 QPYPDLSD---------EQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCCCcCCH---------HHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 77754311 001111111000 0 000111123456677888888 59999999999999874
No 219
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-37 Score=322.79 Aligned_cols=265 Identities=23% Similarity=0.336 Sum_probs=218.1
Q ss_pred CCcccchHHHhhhcceeccccCceEEEEEEeCC---C--cEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeE
Q 003847 466 GDKELELETLLKASAYILGASGSSIMYKAVLED---G--TALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGF 539 (791)
Q Consensus 466 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~---g--~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~ 539 (791)
+...+++.......+.+||+|-||.||+|.+.+ | -.||||.-+.+ ..+..+.|..|..+|++++||||++++|+
T Consensus 380 ~~rnyel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv 459 (974)
T KOG4257|consen 380 TVRNYELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGV 459 (974)
T ss_pred CCCcceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeee
Confidence 334566665556667899999999999999532 3 46889988774 56667899999999999999999999999
Q ss_pred EEccCceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEec
Q 003847 540 YWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGD 619 (791)
Q Consensus 540 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~D 619 (791)
|.+ ...|||||.++-|.|..|++.+.. .++......++.||+.||+|||+.++|||||...|||+.....|||+|
T Consensus 460 ~~e-~P~WivmEL~~~GELr~yLq~nk~----sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaD 534 (974)
T KOG4257|consen 460 CVE-QPMWIVMELAPLGELREYLQQNKD----SLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLAD 534 (974)
T ss_pred eec-cceeEEEecccchhHHHHHHhccc----cchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecc
Confidence 965 578999999999999999988765 388999999999999999999999999999999999999999999999
Q ss_pred cCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHH
Q 003847 620 FGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFG 699 (791)
Q Consensus 620 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlG 699 (791)
||+++.+..+....... ..=...|||||.+.-.+++.++|||-||
T Consensus 535 FGLSR~~ed~~yYkaS~-----------------------------------~kLPIKWmaPESINfRrFTtASDVWMFg 579 (974)
T KOG4257|consen 535 FGLSRYLEDDAYYKASR-----------------------------------GKLPIKWMAPESINFRRFTTASDVWMFG 579 (974)
T ss_pred cchhhhccccchhhccc-----------------------------------cccceeecCccccchhcccchhhHHHHH
Confidence 99999987554322110 0012459999999999999999999999
Q ss_pred HHHHHHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhc
Q 003847 700 VILLELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALE 778 (791)
Q Consensus 700 vil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 778 (791)
|.+||++. |..||.+-....+-..++++.+ .+.++.++..++.|+.+||++||.+||++.|+...|.
T Consensus 580 VCmWEIl~lGvkPfqgvkNsDVI~~iEnGeR------------lP~P~nCPp~LYslmskcWayeP~kRPrftei~~~ls 647 (974)
T KOG4257|consen 580 VCMWEILSLGVKPFQGVKNSDVIGHIENGER------------LPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILS 647 (974)
T ss_pred HHHHHHHHhcCCccccccccceEEEecCCCC------------CCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHH
Confidence 99999977 7889987655544444444332 3445557889999999999999999999999999887
Q ss_pred cCCC
Q 003847 779 KIPS 782 (791)
Q Consensus 779 ~i~~ 782 (791)
++..
T Consensus 648 dv~q 651 (974)
T KOG4257|consen 648 DVLQ 651 (974)
T ss_pred HHHH
Confidence 7643
No 220
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=9.7e-36 Score=314.68 Aligned_cols=260 Identities=24% Similarity=0.361 Sum_probs=204.8
Q ss_pred cceeccccCceEEEEEEeC-CCc----EEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEec
Q 003847 479 SAYILGASGSSIMYKAVLE-DGT----ALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDF 552 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~-~g~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 552 (791)
..+.||+|+||.||+|... +|+ .||+|.+.... .....++.+|+.++++++|+||+++++++.. ...++||||
T Consensus 11 ~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~ 89 (279)
T cd05057 11 KIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLITQL 89 (279)
T ss_pred EcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEEEec
Confidence 3468999999999999853 333 69999987653 3345678999999999999999999999987 788999999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCC
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 632 (791)
+++|+|.+++..... .+++..+..++.|++.||+|||+.+|+||||||+||+++.++.+||+|||+++........
T Consensus 90 ~~~g~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~ 165 (279)
T cd05057 90 MPLGCLLDYVRNHKD----NIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKE 165 (279)
T ss_pred CCCCcHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCcccc
Confidence 999999999876533 3899999999999999999999999999999999999999999999999999876422111
Q ss_pred CcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcc
Q 003847 633 SKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVI 711 (791)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~p 711 (791)
.. .....++..|+|||.+....++.++|+||||+++||+++ |+.|
T Consensus 166 ~~----------------------------------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p 211 (279)
T cd05057 166 YH----------------------------------AEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKP 211 (279)
T ss_pred ee----------------------------------cCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCC
Confidence 00 001113567999999988889999999999999999998 9999
Q ss_pred hhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCCCCCCcC
Q 003847 712 VVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSSPSPYLY 789 (791)
Q Consensus 712 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~p~~~ 789 (791)
|...... .....+... .....+......+.+++.+||..+|.+||++.++++.|+++...+.-|+.
T Consensus 212 ~~~~~~~----------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~~~~~ 277 (279)
T cd05057 212 YEGIPAV----------EIPDLLEKG--ERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDPQRYLV 277 (279)
T ss_pred CCCCCHH----------HHHHHHhCC--CCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCCcceEe
Confidence 8653111 111111111 01111112345788999999999999999999999999998877776653
No 221
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5e-36 Score=334.70 Aligned_cols=251 Identities=17% Similarity=0.207 Sum_probs=189.5
Q ss_pred hcceeccccCceEEEEEEeC-CCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 478 ASAYILGASGSSIMYKAVLE-DGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
.....||+|+||.||++... +++.||||.... ..+.+|++++++++|+|||++++++...+..++|||++. +
T Consensus 172 ~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~ 244 (461)
T PHA03211 172 AIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-S 244 (461)
T ss_pred EEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-C
Confidence 34568999999999999954 578999996432 345789999999999999999999999999999999994 7
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++..... .+++.+++.|+.||+.||+|||+.||+||||||+|||++.++.+||+|||+++........
T Consensus 245 ~L~~~l~~~~~----~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~---- 316 (461)
T PHA03211 245 DLYTYLGARLR----PLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWST---- 316 (461)
T ss_pred CHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceeccccccc----
Confidence 88888765432 4899999999999999999999999999999999999999999999999999865321110
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
.......||..|+|||++.+..++.++|||||||++|||++|..++....
T Consensus 317 ------------------------------~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~ 366 (461)
T PHA03211 317 ------------------------------PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSAS 366 (461)
T ss_pred ------------------------------ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCC
Confidence 01123459999999999999999999999999999999999887543211
Q ss_pred -cCCCCcchhchhHHHHHHHH----------------------h----hhcC-----ccchHHHHHHHHHHHhhccCCCC
Q 003847 717 -GQGNGLLVEDKNRAIRLADA----------------------A----IRAD-----FEGKEEALLSCFKLGYSCASPLP 764 (791)
Q Consensus 717 -~~~~~~~~~~~~~~~~~~~~----------------------~----~~~~-----~~~~~~~~~~l~~li~~cl~~dP 764 (791)
......... .+.+++.. . .... +.........+.+|+.+||+.||
T Consensus 367 ~~~~~~~~~~---~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP 443 (461)
T PHA03211 367 RGDERRPYDA---QILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDG 443 (461)
T ss_pred cccccCCcHH---HHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccCh
Confidence 100000000 00000000 0 0000 00000122367889999999999
Q ss_pred CCCCCHHHHHHH
Q 003847 765 QKRPSMKEALQA 776 (791)
Q Consensus 765 ~~RPs~~evl~~ 776 (791)
++|||+.|+++.
T Consensus 444 ~~RPsa~elL~h 455 (461)
T PHA03211 444 ARRPSAAELLRL 455 (461)
T ss_pred hhCcCHHHHhhC
Confidence 999999999874
No 222
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.1e-35 Score=310.95 Aligned_cols=249 Identities=23% Similarity=0.392 Sum_probs=198.5
Q ss_pred ceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCChh
Q 003847 480 AYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLA 559 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 559 (791)
.+.||+|+||.||++...++..+|+|.+..... ..+.+.+|++++++++|+||+++++++.. ...+++|||+++++|.
T Consensus 11 ~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~ 88 (260)
T cd05073 11 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLL 88 (260)
T ss_pred EeEecCccceEEEEEEecCCccEEEEecCCChh-HHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCCCcHH
Confidence 468999999999999987788899999876432 34678899999999999999999999887 7789999999999999
Q ss_pred HHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCCc
Q 003847 560 NARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639 (791)
Q Consensus 560 ~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~ 639 (791)
+++..... ..+++..+..++.|++.||+|||+.|++||||||+||+++.++.+||+|||.+.........
T Consensus 89 ~~~~~~~~---~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~------- 158 (260)
T cd05073 89 DFLKSDEG---SKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT------- 158 (260)
T ss_pred HHHHhCCc---cccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcc-------
Confidence 99876432 24789999999999999999999999999999999999999999999999998765421110
Q ss_pred cccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhccccC
Q 003847 640 RNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDELGQ 718 (791)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~ 718 (791)
......++..|+|||++....++.++|+|||||++|++++ |+.||......
T Consensus 159 ----------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~ 210 (260)
T cd05073 159 ----------------------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP 210 (260)
T ss_pred ----------------------------cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH
Confidence 0011225567999999998889999999999999999999 88888543110
Q ss_pred CCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 719 GNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
.......... ..+.....+..+.+++.+|++.+|++||++.++++.|+.+
T Consensus 211 ----------~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~~ 260 (260)
T cd05073 211 ----------EVIRALERGY--RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 260 (260)
T ss_pred ----------HHHHHHhCCC--CCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhcC
Confidence 0111111110 1111223456788999999999999999999999999753
No 223
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=8.8e-36 Score=312.71 Aligned_cols=249 Identities=23% Similarity=0.351 Sum_probs=197.1
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCch---------hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEE
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSV---------DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLII 549 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~---------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 549 (791)
...||+|++|.||+|.. .+++.||+|.+..... ...+.+++|+.++++++||||+++++++...+..++|
T Consensus 5 ~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (267)
T cd06628 5 GALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLNIF 84 (267)
T ss_pred cceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEEE
Confidence 45899999999999985 4689999998865322 1235688999999999999999999999999999999
Q ss_pred EeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCC
Q 003847 550 YDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGD 629 (791)
Q Consensus 550 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 629 (791)
|||+++++|.+++.... .+++..+..++.|++.||+|||+.|++||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~e~~~~~~L~~~l~~~~-----~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06628 85 LEYVPGGSVAALLNNYG-----AFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEAN 159 (267)
T ss_pred EEecCCCCHHHHHHhcc-----CccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCcccccc
Confidence 99999999999987653 3889999999999999999999999999999999999999999999999999876532
Q ss_pred CCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCC
Q 003847 630 TSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~ 709 (791)
...... ........|+..|+|||.+.+..++.++|||||||++|+|++|+
T Consensus 160 ~~~~~~------------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~ 209 (267)
T cd06628 160 SLSTKT------------------------------NGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGK 209 (267)
T ss_pred cccCCc------------------------------cccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCC
Confidence 111000 00112244888999999999888999999999999999999999
Q ss_pred cchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 710 VIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 710 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
.||..... ......... .... .........+.+++.+||+.||.+||++.|+++
T Consensus 210 ~p~~~~~~---------~~~~~~~~~-~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 210 HPFPDCTQ---------LQAIFKIGE-NASP--EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred CCCCCccH---------HHHHHHHhc-cCCC--cCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 99964311 111111111 1111 111224567889999999999999999999986
No 224
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.2e-35 Score=316.30 Aligned_cols=247 Identities=22% Similarity=0.303 Sum_probs=196.3
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
...||+|+||.||+|+. .+++.||+|.+........+.+.+|++++++++|+||+++++++..++..++||||+++++|
T Consensus 17 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l 96 (292)
T cd06644 17 IGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAV 96 (292)
T ss_pred hheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCcH
Confidence 34799999999999995 45899999999877666678899999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
..++..... .+++..+..++.|++.||+|||+.+|+||||||+||+++.++.+||+|||++........
T Consensus 97 ~~~~~~~~~----~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~------- 165 (292)
T cd06644 97 DAIMLELDR----GLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQ------- 165 (292)
T ss_pred HHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccccc-------
Confidence 887765432 389999999999999999999999999999999999999999999999998865322110
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc-----CCCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR-----SIKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~-----~~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
......|+..|+|||++. ...++.++|||||||++|||++|+.||.
T Consensus 166 -----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~ 216 (292)
T cd06644 166 -----------------------------RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHH 216 (292)
T ss_pred -----------------------------ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCc
Confidence 011234788899999984 3456889999999999999999999985
Q ss_pred ccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 714 DELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
..... ......... ..............+.+++.+||..+|++||++.|+++.
T Consensus 217 ~~~~~---------~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 217 ELNPM---------RVLLKIAKS-EPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred cccHH---------HHHHHHhcC-CCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 43210 001111110 011111122244678899999999999999999999863
No 225
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=6.7e-36 Score=318.78 Aligned_cols=260 Identities=22% Similarity=0.283 Sum_probs=197.4
Q ss_pred ceeccccCceEEEEEEeC-----------------CCcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEE
Q 003847 480 AYILGASGSSIMYKAVLE-----------------DGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-----------------~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~ 541 (791)
.+.||+|+||.||++... ++..||+|++... .......+.+|++++++++|+||+++++++.
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~ 89 (296)
T cd05095 10 KEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCI 89 (296)
T ss_pred eeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence 468999999999998532 2457999999764 3334567899999999999999999999999
Q ss_pred ccCceEEEEeccCCCChhHHHHhhcCCC------CCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCe
Q 003847 542 GVDEKLIIYDFVPNGSLANARYRKMGSS------PCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP 615 (791)
Q Consensus 542 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~------~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~ 615 (791)
..+..++||||+++++|.+++....... ...+++.++..++.|++.||+|||+.||+||||||+||+++.++.+
T Consensus 90 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~~~~ 169 (296)
T cd05095 90 TSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTI 169 (296)
T ss_pred cCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCCCCE
Confidence 9999999999999999999987643221 1247888999999999999999999999999999999999999999
Q ss_pred EEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhh
Q 003847 616 KIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDV 695 (791)
Q Consensus 616 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDv 695 (791)
+|+|||+++.+....... ......++..|+|||...+..++.++||
T Consensus 170 ~l~dfg~~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Di 215 (296)
T cd05095 170 KIADFGMSRNLYSGDYYR----------------------------------IQGRAVLPIRWMSWESILLGKFTTASDV 215 (296)
T ss_pred EeccCcccccccCCccee----------------------------------ccCcCcCccccCCHHHHhcCCccchhhh
Confidence 999999988653221100 0011124567999999888889999999
Q ss_pred HHHHHHHHHHHh--CCcchhccccCCCCcchhchhHHHHHHHHhh-hcCccchHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 003847 696 YSFGVILLELLT--GKVIVVDELGQGNGLLVEDKNRAIRLADAAI-RADFEGKEEALLSCFKLGYSCASPLPQKRPSMKE 772 (791)
Q Consensus 696 wSlGvil~ellt--G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 772 (791)
|||||++|||++ |..||....... .+. .......... ....+.....+..+.+++.+||+.||++||++.|
T Consensus 216 wSlG~~l~el~~~~~~~p~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ 289 (296)
T cd05095 216 WAFGVTLWEILTLCKEQPYSQLSDEQ---VIE---NTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQE 289 (296)
T ss_pred hHHHHHHHHHHHhCCCCCccccChHH---HHH---HHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHH
Confidence 999999999998 666775421110 000 0111111110 0111111224567889999999999999999999
Q ss_pred HHHHhcc
Q 003847 773 ALQALEK 779 (791)
Q Consensus 773 vl~~L~~ 779 (791)
|++.|++
T Consensus 290 i~~~l~~ 296 (296)
T cd05095 290 IHATLLE 296 (296)
T ss_pred HHHHHhC
Confidence 9999874
No 226
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=8.6e-36 Score=312.49 Aligned_cols=250 Identities=23% Similarity=0.318 Sum_probs=197.5
Q ss_pred ceeccccCceEEEEEEeCCCcEEEEEEcCCCc------hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEecc
Q 003847 480 AYILGASGSSIMYKAVLEDGTALAVRRIGENS------VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
...||+|+||.||+|...+++.+|||.+.... ....+.+.+|++++++++|+||+++++++.+.+..++||||+
T Consensus 5 ~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 84 (265)
T cd06631 5 GEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFV 84 (265)
T ss_pred cceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEecC
Confidence 46899999999999998889999999986432 222356889999999999999999999999999999999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
++++|.+++.... ++++..+..++.|++.||+|||+.+|+|+||||+||+++.++.+||+|||++..........
T Consensus 85 ~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 159 (265)
T cd06631 85 PGGSISSILNRFG-----PLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHG 159 (265)
T ss_pred CCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccc
Confidence 9999999987643 38899999999999999999999999999999999999999999999999988653211110
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
. .........|+..|+|||++.+..++.++||||||+++|+|++|+.||.
T Consensus 160 ~------------------------------~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~ 209 (265)
T cd06631 160 T------------------------------HSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLA 209 (265)
T ss_pred c------------------------------ccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccc
Confidence 0 0001123348899999999998889999999999999999999999995
Q ss_pred ccccCCCCcchhchhHHHHHHHH-hhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 714 DELGQGNGLLVEDKNRAIRLADA-AIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
.... .......... .... .........+.+++.+||+.+|++||++.|+++
T Consensus 210 ~~~~---------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 210 SMDR---------LAAMFYIGAHRGLMP--RLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred cCCh---------HHHHHHhhhccCCCC--CCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 4210 0000111100 0001 111224567889999999999999999999875
No 227
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=5.7e-36 Score=325.93 Aligned_cols=260 Identities=23% Similarity=0.307 Sum_probs=197.4
Q ss_pred hcceeccccCceEEEEEEe------CCCcEEEEEEcCCCc-hhhHHHHHHHHHHHhcc-CCCCccceeeEEEcc-CceEE
Q 003847 478 ASAYILGASGSSIMYKAVL------EDGTALAVRRIGENS-VDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGV-DEKLI 548 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~-~~~~l 548 (791)
...+.||+|+||.||+|.. .+++.||||+++... ....+.+.+|+.++.++ +|+||+++++++... ...++
T Consensus 10 ~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~l 89 (343)
T cd05103 10 KLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMV 89 (343)
T ss_pred cccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEE
Confidence 3456899999999999973 357899999997643 33456788999999999 689999999988654 45789
Q ss_pred EEeccCCCChhHHHHhhcCCC-----------------------------------------------------------
Q 003847 549 IYDFVPNGSLANARYRKMGSS----------------------------------------------------------- 569 (791)
Q Consensus 549 v~e~~~~gsL~~~l~~~~~~~----------------------------------------------------------- 569 (791)
||||+++|+|.+++.......
T Consensus 90 v~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (343)
T cd05103 90 IVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQE 169 (343)
T ss_pred EEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhhh
Confidence 999999999999987532100
Q ss_pred ---CCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCCccccCCcc
Q 003847 570 ---PCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKR 646 (791)
Q Consensus 570 ---~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~ 646 (791)
...+++..+..++.|+++||+|||+.+|+||||||+||+++.++.+||+|||++...........
T Consensus 170 ~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~------------ 237 (343)
T cd05103 170 DLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVR------------ 237 (343)
T ss_pred hhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhh------------
Confidence 01368888999999999999999999999999999999999999999999999876532211000
Q ss_pred cccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhccccCCCCcchh
Q 003847 647 STASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDELGQGNGLLVE 725 (791)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~~~~~~~~ 725 (791)
.....++..|+|||.+.+..++.++||||||+++|||++ |..||......
T Consensus 238 ----------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~------- 288 (343)
T cd05103 238 ----------------------KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID------- 288 (343)
T ss_pred ----------------------cCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc-------
Confidence 011225667999999988889999999999999999997 88888542110
Q ss_pred chhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCC
Q 003847 726 DKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPS 782 (791)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 782 (791)
............. ..+......+.+++.+||+.||++||++.|+++.|+.+..
T Consensus 289 --~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 289 --EEFCRRLKEGTRM--RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred --HHHHHHHhccCCC--CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0011111111111 1111133568899999999999999999999999987653
No 228
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=8.6e-36 Score=319.71 Aligned_cols=255 Identities=22% Similarity=0.297 Sum_probs=196.9
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
..+.||+|+||.||++.. .++..+|+|.+... ......++.+|++++++++||||+++++++..++..++||||++++
T Consensus 5 ~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~ 84 (308)
T cd06615 5 KLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 84 (308)
T ss_pred EEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCC
Confidence 346899999999999994 46889999998754 3334466889999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE-KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
+|.+++.... ++++..+..++.|+++||+|||+ .+++||||||+||+++.++.+||+|||++.......
T Consensus 85 ~L~~~l~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~----- 154 (308)
T cd06615 85 SLDQVLKKAG-----RIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----- 154 (308)
T ss_pred cHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccccc-----
Confidence 9999987653 38999999999999999999997 699999999999999999999999999986542110
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
.....|+..|+|||.+.+..++.++||||||+++|||++|+.||...
T Consensus 155 ---------------------------------~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~ 201 (308)
T cd06615 155 ---------------------------------ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPP 201 (308)
T ss_pred ---------------------------------cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCc
Confidence 11234788999999998888999999999999999999999998532
Q ss_pred ccCCCCcchh-----------------------chhHHHHHHHHhhhcCccc--hHHHHHHHHHHHhhccCCCCCCCCCH
Q 003847 716 LGQGNGLLVE-----------------------DKNRAIRLADAAIRADFEG--KEEALLSCFKLGYSCASPLPQKRPSM 770 (791)
Q Consensus 716 ~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPs~ 770 (791)
.......... ......+..+.......+. .......+.+++.+||..+|++||++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~ 281 (308)
T cd06615 202 DAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADL 281 (308)
T ss_pred chhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCH
Confidence 2110000000 0000111111111110000 01134568899999999999999999
Q ss_pred HHHHHH
Q 003847 771 KEALQA 776 (791)
Q Consensus 771 ~evl~~ 776 (791)
.|+++.
T Consensus 282 ~~ll~~ 287 (308)
T cd06615 282 KELTKH 287 (308)
T ss_pred HHHhcC
Confidence 999876
No 229
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=3.5e-36 Score=314.12 Aligned_cols=238 Identities=26% Similarity=0.345 Sum_probs=189.1
Q ss_pred eeccccCceEEEEEEeCC-C----------cEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEE
Q 003847 481 YILGASGSSIMYKAVLED-G----------TALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLII 549 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~-g----------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 549 (791)
+.||+|+||.||+|...+ + ..|++|.+...... ...+.+|+.++++++||||+++++++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 368999999999999654 3 35888887665433 5788999999999999999999999988 788999
Q ss_pred EeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCC-------CeEEeccCc
Q 003847 550 YDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDM-------EPKIGDFGL 622 (791)
Q Consensus 550 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~-------~~kL~DFGl 622 (791)
|||+++|+|.+++..... .+++..+..++.||+.||+|||+.||+||||||+||+++.++ .+||+|||+
T Consensus 79 ~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 79 EEYVKFGPLDVFLHREKN----NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred EEcCCCCcHHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 999999999999876542 389999999999999999999999999999999999999887 799999999
Q ss_pred ccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC--CCCCchhhHHHHH
Q 003847 623 ERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI--KPNPKWDVYSFGV 700 (791)
Q Consensus 623 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~--~~~~~sDvwSlGv 700 (791)
+....... ...++..|+|||++.+. .++.++||||||+
T Consensus 155 a~~~~~~~----------------------------------------~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~ 194 (259)
T cd05037 155 PITVLSRE----------------------------------------ERVERIPWIAPECIRNGQASLTIAADKWSFGT 194 (259)
T ss_pred cccccccc----------------------------------------ccccCCCccChhhhcCCCCCcchhhHHHHHHH
Confidence 88653210 11256679999999876 7899999999999
Q ss_pred HHHHHHhC-CcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhc
Q 003847 701 ILLELLTG-KVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALE 778 (791)
Q Consensus 701 il~elltG-~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 778 (791)
++|||++| ..||...... +. ..... .....+.. ....+.+++.+||..+|.+||++.|+++.|+
T Consensus 195 ~~~~l~~~~~~p~~~~~~~-------~~---~~~~~--~~~~~~~~--~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 195 TLLEICSNGEEPLSTLSSS-------EK---ERFYQ--DQHRLPMP--DCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred HHHHHHhCCCCCcccCCch-------hH---HHHHh--cCCCCCCC--CchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 99999995 5566443110 00 01111 00111111 2267889999999999999999999999874
No 230
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=3.7e-36 Score=320.70 Aligned_cols=244 Identities=20% Similarity=0.313 Sum_probs=196.2
Q ss_pred eeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCChh
Q 003847 481 YILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLA 559 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 559 (791)
..||+|+||.||++.. .+++.||+|.+........+.+.+|+.+++.++||||+++++++...+..++||||+++++|.
T Consensus 27 ~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~ 106 (297)
T cd06659 27 IKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALT 106 (297)
T ss_pred hhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHH
Confidence 3699999999999985 478999999997654445567889999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCCc
Q 003847 560 NARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639 (791)
Q Consensus 560 ~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~ 639 (791)
+++... .+++..+..++.|++.||+|||+.+++||||||+||+++.++.+||+|||++........
T Consensus 107 ~~~~~~------~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~-------- 172 (297)
T cd06659 107 DIVSQT------RLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP-------- 172 (297)
T ss_pred HHHhhc------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccc--------
Confidence 876542 389999999999999999999999999999999999999999999999999875432110
Q ss_pred cccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccccCC
Q 003847 640 RNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQG 719 (791)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~ 719 (791)
......|+..|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 173 ----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~- 223 (297)
T cd06659 173 ----------------------------KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV- 223 (297)
T ss_pred ----------------------------cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-
Confidence 011234888999999999888999999999999999999999998643110
Q ss_pred CCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 720 NGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
.......................+.+++.+||+.+|++||++.++++.
T Consensus 224 ---------~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 224 ---------QAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred ---------HHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 001111111111111111234567899999999999999999999984
No 231
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=7.5e-36 Score=319.44 Aligned_cols=257 Identities=23% Similarity=0.370 Sum_probs=199.1
Q ss_pred ceeccccCceEEEEEEe-CCCc----EEEEEEcCCCch-hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEecc
Q 003847 480 AYILGASGSSIMYKAVL-EDGT----ALAVRRIGENSV-DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
.+.||+|+||.||+|.. .+|+ .||+|.+..... ....++.+|+.++++++||||+++++++... ..++++||+
T Consensus 12 ~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~e~~ 90 (303)
T cd05110 12 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLM 90 (303)
T ss_pred ccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cceeeehhc
Confidence 46899999999999984 3454 579998876532 3344788999999999999999999998754 567999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
++|+|.+++..... .+++..+..++.|++.||+|||+++|+||||||+||+++.++.+||+|||+++.........
T Consensus 91 ~~g~l~~~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~ 166 (303)
T cd05110 91 PHGCLLDYVHEHKD----NIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEY 166 (303)
T ss_pred CCCCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCccccc
Confidence 99999998876532 38899999999999999999999999999999999999999999999999998654221100
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcch
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIV 712 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf 712 (791)
......++..|+|||.+.+..++.++|||||||++|||++ |+.||
T Consensus 167 ----------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~ 212 (303)
T cd05110 167 ----------------------------------NADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPY 212 (303)
T ss_pred ----------------------------------ccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCC
Confidence 0011225677999999998899999999999999999998 88888
Q ss_pred hccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCCCCCC
Q 003847 713 VDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSSPSPY 787 (791)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~p~ 787 (791)
.+... ....+...... ..+........+.+++.+||..+|++||+++++++.|+++...+..|
T Consensus 213 ~~~~~----------~~~~~~~~~~~--~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~~~~ 275 (303)
T cd05110 213 DGIPT----------REIPDLLEKGE--RLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQRY 275 (303)
T ss_pred CCCCH----------HHHHHHHHCCC--CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhchhhh
Confidence 54311 11111211111 11111123457889999999999999999999999999876555443
No 232
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=6.5e-36 Score=327.38 Aligned_cols=252 Identities=19% Similarity=0.220 Sum_probs=188.4
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccC------ceEEEE
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVD------EKLIIY 550 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~~~lv~ 550 (791)
.+.||+|+||.||++.. .+++.||||++... .....+.+.+|+.+++.++||||+++++++.... ..++||
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~ 101 (355)
T cd07874 22 LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVM 101 (355)
T ss_pred EEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEh
Confidence 46899999999999984 46899999999753 2334467788999999999999999999886543 469999
Q ss_pred eccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCC
Q 003847 551 DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 630 (791)
||+++ +|.+.+.. .+++..+..++.|++.||+|||+.||+||||||+|||++.++.+||+|||+++......
T Consensus 102 e~~~~-~l~~~~~~-------~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~ 173 (355)
T cd07874 102 ELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF 173 (355)
T ss_pred hhhcc-cHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCCcc
Confidence 99965 66666543 28889999999999999999999999999999999999999999999999997543211
Q ss_pred CCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCc
Q 003847 631 SSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~ 710 (791)
......||..|+|||++.+..++.++|||||||++|||++|+.
T Consensus 174 -------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~ 216 (355)
T cd07874 174 -------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 216 (355)
T ss_pred -------------------------------------ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 0112358899999999999899999999999999999999999
Q ss_pred chhccccCCC------------Ccchhch-hHHHHHHHHh----------------hhcCccchHHHHHHHHHHHhhccC
Q 003847 711 IVVDELGQGN------------GLLVEDK-NRAIRLADAA----------------IRADFEGKEEALLSCFKLGYSCAS 761 (791)
Q Consensus 711 pf~~~~~~~~------------~~~~~~~-~~~~~~~~~~----------------~~~~~~~~~~~~~~l~~li~~cl~ 761 (791)
||........ ....... .......+.. ..............+.+++.+||.
T Consensus 217 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~ 296 (355)
T cd07874 217 LFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV 296 (355)
T ss_pred CCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhc
Confidence 9864321000 0000000 0000000000 000000011123467899999999
Q ss_pred CCCCCCCCHHHHHHH
Q 003847 762 PLPQKRPSMKEALQA 776 (791)
Q Consensus 762 ~dP~~RPs~~evl~~ 776 (791)
.||++|||+.|+++.
T Consensus 297 ~dP~~Rps~~ell~h 311 (355)
T cd07874 297 IDPAKRISVDEALQH 311 (355)
T ss_pred CCchhcCCHHHHhcC
Confidence 999999999999985
No 233
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.8e-36 Score=327.48 Aligned_cols=188 Identities=20% Similarity=0.303 Sum_probs=159.2
Q ss_pred hhcceeccccCceEEEEEEeC-CCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 477 KASAYILGASGSSIMYKAVLE-DGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 477 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
+.....||+|+||.||+|+.. +++.||+|..... ....|+.++++++|+||+++++++...+..++||||+.
T Consensus 68 y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~- 140 (357)
T PHA03209 68 YTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS- 140 (357)
T ss_pred cEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC-
Confidence 344578999999999999954 5789999986443 23468999999999999999999999999999999994
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
++|.+++..... .+++..++.|+.||+.||+|||+.||+||||||+|||++.++.+||+|||+++......
T Consensus 141 ~~l~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~----- 211 (357)
T PHA03209 141 SDLYTYLTKRSR----PLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP----- 211 (357)
T ss_pred CcHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccCc-----
Confidence 688888765432 48999999999999999999999999999999999999999999999999987432111
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcch
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIV 712 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf 712 (791)
......||..|+|||++.+..++.++|||||||++|||+++..++
T Consensus 212 --------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 212 --------------------------------AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred --------------------------------ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 011234899999999999999999999999999999999976654
No 234
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.4e-36 Score=333.54 Aligned_cols=253 Identities=16% Similarity=0.211 Sum_probs=192.0
Q ss_pred cceeccccCceEEEEEEeC---CCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 479 SAYILGASGSSIMYKAVLE---DGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
....||+|+||.||++... .++.||||.+... +...+|++++++++||||+++++++......++|||++.
T Consensus 96 i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~- 169 (392)
T PHA03207 96 ILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK- 169 (392)
T ss_pred EEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC-
Confidence 4568999999999999743 4678999998654 245689999999999999999999999999999999995
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
++|.+++.... .+++.+++.|+.||+.||+|||+.||+||||||+|||++.++.+||+|||+++........
T Consensus 170 ~~l~~~l~~~~-----~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~--- 241 (392)
T PHA03207 170 CDLFTYVDRSG-----PLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDT--- 241 (392)
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCccccc---
Confidence 68888874332 3899999999999999999999999999999999999999999999999998765432110
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.
T Consensus 242 -------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~ 290 (392)
T PHA03207 242 -------------------------------PQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGK 290 (392)
T ss_pred -------------------------------ccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 0112345899999999999989999999999999999999999998654
Q ss_pred ccCCCCcchhc----------------hhHHHHHH---HHhhhcCccch-----HHHHHHHHHHHhhccCCCCCCCCCHH
Q 003847 716 LGQGNGLLVED----------------KNRAIRLA---DAAIRADFEGK-----EEALLSCFKLGYSCASPLPQKRPSMK 771 (791)
Q Consensus 716 ~~~~~~~~~~~----------------~~~~~~~~---~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs~~ 771 (791)
........+.. .......+ ....+..+..+ ......+.+++.+||..||++||++.
T Consensus 291 ~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~ 370 (392)
T PHA03207 291 QVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQ 370 (392)
T ss_pred CCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHH
Confidence 32111000000 00000000 00001111100 01234678899999999999999999
Q ss_pred HHHHH
Q 003847 772 EALQA 776 (791)
Q Consensus 772 evl~~ 776 (791)
|++..
T Consensus 371 e~l~~ 375 (392)
T PHA03207 371 DILSL 375 (392)
T ss_pred HHhhC
Confidence 99875
No 235
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=2.1e-35 Score=308.73 Aligned_cols=247 Identities=24% Similarity=0.350 Sum_probs=199.2
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
.+.||.|+||.||+|.. .+++.+|+|.+........+.+.+|++++++++||||+++++++...+..+++|||+++++|
T Consensus 8 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l 87 (262)
T cd06613 8 IQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSL 87 (262)
T ss_pred EEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCcH
Confidence 46799999999999995 46789999999876555678899999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++..... .+++.++..++.|++.||+|||+.+|+|+||||+||+++.++.+||+|||++........
T Consensus 88 ~~~~~~~~~----~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~------- 156 (262)
T cd06613 88 QDIYQVTRG----PLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA------- 156 (262)
T ss_pred HHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhh-------
Confidence 998876522 389999999999999999999999999999999999999999999999999876542110
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC---CCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI---KPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~---~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
......|+..|+|||.+.+. .++.++||||||+++|||++|+.||...
T Consensus 157 -----------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~ 207 (262)
T cd06613 157 -----------------------------KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDL 207 (262)
T ss_pred -----------------------------ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 01123478889999999776 7899999999999999999999998653
Q ss_pred ccCCCCcchhchhHHHHHHHHhhh-cCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIR-ADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
... ............ .........+..+.+++.+||..+|.+|||+.+++.
T Consensus 208 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 208 HPM---------RALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred CHH---------HHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 210 111111111000 011112234567899999999999999999999975
No 236
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=8.2e-36 Score=316.70 Aligned_cols=246 Identities=24% Similarity=0.280 Sum_probs=185.9
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc--hhhHHHHHHHHHHHhcc---CCCCccceeeEEEcc-----CceEE
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS--VDRFRDFETQVRVIAKL---VHPNLVRIRGFYWGV-----DEKLI 548 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~~~-----~~~~l 548 (791)
...||+|+||.||+|+. .+++.||+|.++... ......+.+|+++++++ +||||+++++++... ...++
T Consensus 5 ~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~l 84 (288)
T cd07863 5 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTL 84 (288)
T ss_pred eeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEE
Confidence 45799999999999985 478999999986532 11223456677777665 799999999988642 35789
Q ss_pred EEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCC
Q 003847 549 IYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTG 628 (791)
Q Consensus 549 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 628 (791)
||||+. ++|.+++...... .+++..++.++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++....
T Consensus 85 v~e~~~-~~l~~~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd07863 85 VFEHVD-QDLRTYLDKVPPP---GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYSC 160 (288)
T ss_pred EEcccc-cCHHHHHHhcCCC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccccC
Confidence 999997 5888887654322 389999999999999999999999999999999999999999999999999876532
Q ss_pred CCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhC
Q 003847 629 DTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTG 708 (791)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG 708 (791)
... .....||..|+|||++.+..++.++||||+||++|||++|
T Consensus 161 ~~~-------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g 203 (288)
T cd07863 161 QMA-------------------------------------LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRR 203 (288)
T ss_pred ccc-------------------------------------CCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhC
Confidence 110 1123478899999999988999999999999999999999
Q ss_pred CcchhccccCCCCcchhchhHHHHHHHHh------------------hhcC-c----cchHHHHHHHHHHHhhccCCCCC
Q 003847 709 KVIVVDELGQGNGLLVEDKNRAIRLADAA------------------IRAD-F----EGKEEALLSCFKLGYSCASPLPQ 765 (791)
Q Consensus 709 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~-~----~~~~~~~~~l~~li~~cl~~dP~ 765 (791)
++||....... ....+.+.. .... . .........+.+++.+||+.||+
T Consensus 204 ~~~f~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 274 (288)
T cd07863 204 KPLFCGNSEAD---------QLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPH 274 (288)
T ss_pred CcCcCCCCHHH---------HHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcc
Confidence 99985432110 000000000 0000 0 00011345678999999999999
Q ss_pred CCCCHHHHHH
Q 003847 766 KRPSMKEALQ 775 (791)
Q Consensus 766 ~RPs~~evl~ 775 (791)
+|||+.|++.
T Consensus 275 ~R~t~~~~l~ 284 (288)
T cd07863 275 KRISAFRALQ 284 (288)
T ss_pred cCCCHHHHhc
Confidence 9999999985
No 237
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1e-35 Score=310.01 Aligned_cols=244 Identities=23% Similarity=0.356 Sum_probs=197.7
Q ss_pred ceeccccCceEEEEEEeCC-CcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 480 AYILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
...||+|+||.||++...+ ++.||+|.+..... .+++.+|++++++++|+||+++++++......|+++||+++++|
T Consensus 8 ~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L 85 (256)
T cd06612 8 LEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSV 85 (256)
T ss_pred hhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcH
Confidence 4579999999999999654 89999999876533 57899999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++..... .+++..+..++.|++.||+|||+.+++||||+|+||+++.++.+||+|||++.........
T Consensus 86 ~~~l~~~~~----~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~------ 155 (256)
T cd06612 86 SDIMKITNK----TLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAK------ 155 (256)
T ss_pred HHHHHhCcc----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCccc------
Confidence 999865432 3899999999999999999999999999999999999999999999999998876432110
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccccC
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQ 718 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~ 718 (791)
.....|+..|+|||++.+..++.++||||||+++|+|++|+.||......
T Consensus 156 ------------------------------~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~ 205 (256)
T cd06612 156 ------------------------------RNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPM 205 (256)
T ss_pred ------------------------------cccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchh
Confidence 11223778899999999889999999999999999999999998643211
Q ss_pred CCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 719 GNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
.. .....................+.+++.+||+.||++|||+.|+++
T Consensus 206 ~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 206 RA----------IFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred hh----------hhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 00 000000111111222224457889999999999999999999986
No 238
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.1e-35 Score=326.51 Aligned_cols=252 Identities=19% Similarity=0.214 Sum_probs=188.1
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEcc------CceEEEE
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGV------DEKLIIY 550 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~~~~lv~ 550 (791)
...||+|+||.||++.. ..++.||||++... .....+.+.+|+.+++.++||||+++++++... ...|+||
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~ 108 (364)
T cd07875 29 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 108 (364)
T ss_pred EEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEEE
Confidence 46899999999999994 46899999999753 233346788899999999999999999987643 3469999
Q ss_pred eccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCC
Q 003847 551 DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 630 (791)
||+++ +|.+++.. .+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 109 e~~~~-~l~~~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~ 180 (364)
T cd07875 109 ELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF 180 (364)
T ss_pred eCCCC-CHHHHHHh-------cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCCC
Confidence 99964 67766643 27889999999999999999999999999999999999999999999999997643211
Q ss_pred CCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCc
Q 003847 631 SSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~ 710 (791)
......||..|+|||++.+..++.++|||||||++|||++|+.
T Consensus 181 -------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~ 223 (364)
T cd07875 181 -------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 223 (364)
T ss_pred -------------------------------------cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCC
Confidence 0112358899999999999999999999999999999999999
Q ss_pred chhccccCCCC-cc-----------hhchhH-HHHHHHHh----------hhcC------ccchHHHHHHHHHHHhhccC
Q 003847 711 IVVDELGQGNG-LL-----------VEDKNR-AIRLADAA----------IRAD------FEGKEEALLSCFKLGYSCAS 761 (791)
Q Consensus 711 pf~~~~~~~~~-~~-----------~~~~~~-~~~~~~~~----------~~~~------~~~~~~~~~~l~~li~~cl~ 761 (791)
||......... .. ...... ........ +... ..........+.+++.+||.
T Consensus 224 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~ 303 (364)
T cd07875 224 LFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 303 (364)
T ss_pred CCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcC
Confidence 99643210000 00 000000 00000000 0000 00000123467899999999
Q ss_pred CCCCCCCCHHHHHHH
Q 003847 762 PLPQKRPSMKEALQA 776 (791)
Q Consensus 762 ~dP~~RPs~~evl~~ 776 (791)
.||++|||+.|+++.
T Consensus 304 ~dP~~R~t~~e~L~h 318 (364)
T cd07875 304 IDASKRISVDEALQH 318 (364)
T ss_pred cCcccCCCHHHHhcC
Confidence 999999999999884
No 239
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1e-35 Score=313.09 Aligned_cols=245 Identities=20% Similarity=0.311 Sum_probs=190.9
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhcc-CCCCccceeeEEEcc------CceEEEEe
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGV------DEKLIIYD 551 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~------~~~~lv~e 551 (791)
.+.||+|+||.||+|.. .+++.||+|++..... ....+.+|+.+++++ +|+||+++++++... ...|+|||
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e 89 (272)
T cd06637 11 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVME 89 (272)
T ss_pred HHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc-cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEE
Confidence 35799999999999984 4689999999865432 346788999999998 799999999998753 35789999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTS 631 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 631 (791)
|+++++|.+++...... .+++..+..++.|++.||+|||+.+|+||||||+||++++++.+||+|||++........
T Consensus 90 ~~~~~~L~~~l~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~ 166 (272)
T cd06637 90 FCGAGSVTDLIKNTKGN---TLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG 166 (272)
T ss_pred cCCCCcHHHHHHhccCC---CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceecccccc
Confidence 99999999988764322 489999999999999999999999999999999999999999999999999876532110
Q ss_pred CCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc-----CCCCCCchhhHHHHHHHHHHH
Q 003847 632 SSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR-----SIKPNPKWDVYSFGVILLELL 706 (791)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~-----~~~~~~~sDvwSlGvil~ell 706 (791)
......|+..|+|||++. +..++.++|||||||++|||+
T Consensus 167 ------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~ 210 (272)
T cd06637 167 ------------------------------------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMA 210 (272)
T ss_pred ------------------------------------cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHH
Confidence 011345888999999986 346788999999999999999
Q ss_pred hCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 707 TGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 707 tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
+|+.||.+.... ........ ...... .....+..+.+++.+||..+|.+|||+.|+++
T Consensus 211 ~g~~p~~~~~~~---------~~~~~~~~-~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 211 EGAPPLCDMHPM---------RALFLIPR-NPAPRL-KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred hCCCCccccCHH---------HHHHHHhc-CCCCCC-CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 999998543110 00010000 000000 11123457889999999999999999999975
No 240
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.2e-35 Score=336.58 Aligned_cols=252 Identities=19% Similarity=0.163 Sum_probs=183.6
Q ss_pred hcceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCC------CCccceeeEEEcc-CceEEE
Q 003847 478 ASAYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVH------PNLVRIRGFYWGV-DEKLII 549 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H------~nIv~l~~~~~~~-~~~~lv 549 (791)
...+.||+|+||+||+|.. .+++.||||+++.... ..+.+..|++++++++| .+++++++++... ++.++|
T Consensus 132 ~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv 210 (467)
T PTZ00284 132 KILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK-YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIV 210 (467)
T ss_pred EEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh-hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEE
Confidence 3457899999999999985 4688999999965322 23456667777777654 4588999988765 467899
Q ss_pred EeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCeecCCCCCCeEecCCC---------------
Q 003847 550 YDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE-KKHVHGNLKPRNVLLGNDM--------------- 613 (791)
Q Consensus 550 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~ivHrDlkp~NILl~~~~--------------- 613 (791)
||++ +++|.+++.... .+++..+..|+.||+.||+|||+ .|||||||||+|||++.++
T Consensus 211 ~~~~-g~~l~~~l~~~~-----~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~ 284 (467)
T PTZ00284 211 MPKY-GPCLLDWIMKHG-----PFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDP 284 (467)
T ss_pred Eecc-CCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCC
Confidence 9988 778988887643 38999999999999999999998 6999999999999998765
Q ss_pred -CeEEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCc
Q 003847 614 -EPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPK 692 (791)
Q Consensus 614 -~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~ 692 (791)
.+||+|||.+..... .....+||+.|+|||++.+..++.+
T Consensus 285 ~~vkl~DfG~~~~~~~---------------------------------------~~~~~~gt~~Y~APE~~~~~~~~~~ 325 (467)
T PTZ00284 285 CRVRICDLGGCCDERH---------------------------------------SRTAIVSTRHYRSPEVVLGLGWMYS 325 (467)
T ss_pred ceEEECCCCccccCcc---------------------------------------ccccccCCccccCcHHhhcCCCCcH
Confidence 499999998753211 1123468999999999999999999
Q ss_pred hhhHHHHHHHHHHHhCCcchhccccCCCCcchhc-------h-------hHHHHHHHHhh--hcCc-------------c
Q 003847 693 WDVYSFGVILLELLTGKVIVVDELGQGNGLLVED-------K-------NRAIRLADAAI--RADF-------------E 743 (791)
Q Consensus 693 sDvwSlGvil~elltG~~pf~~~~~~~~~~~~~~-------~-------~~~~~~~~~~~--~~~~-------------~ 743 (791)
+|||||||++|||++|+.||...........+.. . .....+++... .... .
T Consensus 326 ~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (467)
T PTZ00284 326 TDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPV 405 (467)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccch
Confidence 9999999999999999999964321100000000 0 00000000000 0000 0
Q ss_pred chHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 744 GKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 744 ~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
........+.+||.+||..||++|||++|+++
T Consensus 406 ~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 406 REVIRDDLLCDLIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred hhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence 00011345789999999999999999999997
No 241
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.9e-35 Score=308.25 Aligned_cols=245 Identities=25% Similarity=0.327 Sum_probs=195.6
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccC-ceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVD-EKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-~~~lv~e~~~~ 555 (791)
.+.||+|++|.||++.. .+++.||+|++... .....+.+.+|++++++++|+|++++++.+...+ ..++||||+++
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~ 84 (257)
T cd08223 5 VRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEG 84 (257)
T ss_pred EEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccCC
Confidence 46899999999999994 45789999998654 2334567889999999999999999999876544 57899999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
++|.+++...... .+++.+++.++.|++.||+|||+.||+||||||+||+++.++.++|+|||++........
T Consensus 85 ~~l~~~l~~~~~~---~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~---- 157 (257)
T cd08223 85 GDLYHKLKEQKGK---LLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD---- 157 (257)
T ss_pred CcHHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCC----
Confidence 9999988764322 389999999999999999999999999999999999999999999999999876532111
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
......|++.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 158 --------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~ 205 (257)
T cd08223 158 --------------------------------MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAK 205 (257)
T ss_pred --------------------------------ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence 011234788899999999989999999999999999999999998542
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCc-cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADF-EGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
.. .........+.. .........+.+++.+|++.+|++||++.++++.
T Consensus 206 ~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 206 DM-------------NSLVYRIIEGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred CH-------------HHHHHHHHhcCCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 10 011111111111 1122355778999999999999999999999864
No 242
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.1e-35 Score=314.47 Aligned_cols=247 Identities=23% Similarity=0.307 Sum_probs=197.7
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
...||.|+||.||++.. .+++.||+|.+........+.+.+|++++++++|+||+++++++..+...++||||+++++|
T Consensus 10 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 89 (280)
T cd06611 10 IGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGAL 89 (280)
T ss_pred HHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCcH
Confidence 34699999999999995 46899999999877666667899999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++..... .+++..++.++.|++.||+|||+.+|+|+||||+||+++.++.++|+|||++........
T Consensus 90 ~~~~~~~~~----~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~------- 158 (280)
T cd06611 90 DSIMLELER----GLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ------- 158 (280)
T ss_pred HHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhccccc-------
Confidence 998876432 389999999999999999999999999999999999999999999999998775432110
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc-----CCCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR-----SIKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~-----~~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
......|++.|+|||.+. ...++.++||||||+++|||++|+.||.
T Consensus 159 -----------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~ 209 (280)
T cd06611 159 -----------------------------KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHH 209 (280)
T ss_pred -----------------------------ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcc
Confidence 011234788899999974 3456789999999999999999999986
Q ss_pred ccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 714 DELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
..... .....+.. ...............+.+++.+||+.+|++||++.++++.
T Consensus 210 ~~~~~---------~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 210 ELNPM---------RVLLKILK-SEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred cCCHH---------HHHHHHhc-CCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 53110 01111111 0011111122245678899999999999999999999864
No 243
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.1e-35 Score=314.03 Aligned_cols=243 Identities=22% Similarity=0.323 Sum_probs=196.1
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
.+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|++++++++||||+++++++...+..++||||+++++
T Consensus 9 ~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 88 (277)
T cd06642 9 LERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGS 88 (277)
T ss_pred HHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCCCc
Confidence 35699999999999984 468899999987543 3445678999999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++... .+++..+..++.|++.||.|||+++++|+||+|+||++++++.++|+|||++..+.....
T Consensus 89 L~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~------ 156 (277)
T cd06642 89 ALDLLKPG------PLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI------ 156 (277)
T ss_pred HHHHhhcC------CCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcch------
Confidence 99987542 388999999999999999999999999999999999999999999999999876542110
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELG 717 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~ 717 (791)
......|+..|+|||++.+..++.++|||||||++|||++|+.||.+...
T Consensus 157 ------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~ 206 (277)
T cd06642 157 ------------------------------KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHP 206 (277)
T ss_pred ------------------------------hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccch
Confidence 01123478889999999988899999999999999999999999864321
Q ss_pred CCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 718 QGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
... ............ .......+.+++.+||+.+|++||++.++++.
T Consensus 207 ~~~----------~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 207 MRV----------LFLIPKNSPPTL--EGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred hhH----------HhhhhcCCCCCC--CcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 110 000111111111 11245678899999999999999999999973
No 244
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=7.6e-36 Score=323.31 Aligned_cols=249 Identities=16% Similarity=0.193 Sum_probs=190.6
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC---chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN---SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
...||+|+||.||+++. .+++.||||++.+. .....+.+.+|+.+++.++|+||+++++++.+.+..|+||||+++
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g 85 (331)
T cd05597 6 LKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVG 85 (331)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCC
Confidence 46899999999999995 46899999998652 222345688899999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|+|.+++..... .+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||++..+......
T Consensus 86 ~~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~--- 158 (331)
T cd05597 86 GDLLTLLSKFED----RLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTV--- 158 (331)
T ss_pred CcHHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCc---
Confidence 999999875432 3899999999999999999999999999999999999999999999999998765422110
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-----CCCCCchhhHHHHHHHHHHHhCCc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-----IKPNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-----~~~~~~sDvwSlGvil~elltG~~ 710 (791)
......||+.|+|||++.. ..++.++|||||||++|||++|+.
T Consensus 159 --------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~ 206 (331)
T cd05597 159 --------------------------------QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGET 206 (331)
T ss_pred --------------------------------cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCC
Confidence 0112348999999999863 457889999999999999999999
Q ss_pred chhccccCCCCcchhchhHHHHHHHHhhhcCcc-chHHHHHHHHHHHhhccCCCCC--CCCCHHHHHHH
Q 003847 711 IVVDELGQGNGLLVEDKNRAIRLADAAIRADFE-GKEEALLSCFKLGYSCASPLPQ--KRPSMKEALQA 776 (791)
Q Consensus 711 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~--~RPs~~evl~~ 776 (791)
||...... .....+.........+ .....+..+.+++.+|+..+++ .|++++++++.
T Consensus 207 Pf~~~~~~---------~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 207 PFYAESLV---------ETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred CCCCCCHH---------HHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 99653110 0011111100000111 1111355678888887765443 37899988876
No 245
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=2e-35 Score=307.72 Aligned_cols=243 Identities=28% Similarity=0.397 Sum_probs=193.8
Q ss_pred cceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 479 SAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
....||+|+||.||++.. +++.||+|.+..... .+.+.+|+.++++++||||+++++++.. +..++||||+++++|
T Consensus 10 ~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~~--~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L 85 (254)
T cd05083 10 LGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDVT--AQAFLEETAVMTKLHHKNLVRLLGVILH-NGLYIVMELMSKGNL 85 (254)
T ss_pred eeeeeccCCCCceEeccc-CCCceEEEeecCcch--HHHHHHHHHHHHhCCCCCcCeEEEEEcC-CCcEEEEECCCCCCH
Confidence 356899999999999975 678899999875432 3678899999999999999999999865 457999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++...... .+++..+..++.|++.||+|||+.|++||||||+||+++.++.+||+|||++........
T Consensus 86 ~~~l~~~~~~---~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~------- 155 (254)
T cd05083 86 VNFLRTRGRA---LVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVD------- 155 (254)
T ss_pred HHHHHhcCcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccccCC-------
Confidence 9998765322 388999999999999999999999999999999999999999999999999875421100
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhcccc
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDELG 717 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~ 717 (791)
....+..|+|||.+.+..++.++||||||+++|||++ |+.||.....
T Consensus 156 --------------------------------~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~ 203 (254)
T cd05083 156 --------------------------------NSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL 203 (254)
T ss_pred --------------------------------CCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH
Confidence 0113456999999988889999999999999999998 8888854311
Q ss_pred CCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhcc
Q 003847 718 QGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779 (791)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 779 (791)
. ............ ......+..+.+++.+||+.+|++||+++++++.|++
T Consensus 204 ~----------~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 204 K----------EVKECVEKGYRM--EPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred H----------HHHHHHhCCCCC--CCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 0 111111111111 1122245678899999999999999999999999874
No 246
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.2e-35 Score=323.69 Aligned_cols=251 Identities=22% Similarity=0.262 Sum_probs=186.9
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc--hhhHHHHHHHHHHHhccCCCCccceeeEEEcc------CceEEEE
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGV------DEKLIIY 550 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~~~~lv~ 550 (791)
...||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++++++|+||+++++++... ...|+++
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~ 99 (343)
T cd07878 20 LTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVT 99 (343)
T ss_pred heecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEe
Confidence 35899999999999984 578899999997542 22345677899999999999999999987543 3568999
Q ss_pred eccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCC
Q 003847 551 DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 630 (791)
|++ +++|.+++... .+++..+..++.||+.||+|||+.||+||||||+||+++.++.+||+|||+++.....
T Consensus 100 ~~~-~~~l~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~- 171 (343)
T cd07878 100 NLM-GADLNNIVKCQ------KLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDE- 171 (343)
T ss_pred ecC-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCCC-
Confidence 988 78998876532 3899999999999999999999999999999999999999999999999998764321
Q ss_pred CCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCC
Q 003847 631 SSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~ 709 (791)
.....||+.|+|||++.+ ..++.++|||||||++|||++|+
T Consensus 172 --------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~ 213 (343)
T cd07878 172 --------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGK 213 (343)
T ss_pred --------------------------------------cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCC
Confidence 112348889999999876 56899999999999999999999
Q ss_pred cchhccccCCCCcchh------chhHHHHH----HHHhhh--cCccch------HHHHHHHHHHHhhccCCCCCCCCCHH
Q 003847 710 VIVVDELGQGNGLLVE------DKNRAIRL----ADAAIR--ADFEGK------EEALLSCFKLGYSCASPLPQKRPSMK 771 (791)
Q Consensus 710 ~pf~~~~~~~~~~~~~------~~~~~~~~----~~~~~~--~~~~~~------~~~~~~l~~li~~cl~~dP~~RPs~~ 771 (791)
.||...........+. .......+ ...... ...+.. ......+.+++.+|+..||++|||+.
T Consensus 214 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ 293 (343)
T cd07878 214 ALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISAS 293 (343)
T ss_pred CCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHH
Confidence 9985432100000000 00000000 000000 000000 00123467999999999999999999
Q ss_pred HHHHH
Q 003847 772 EALQA 776 (791)
Q Consensus 772 evl~~ 776 (791)
|+++.
T Consensus 294 ell~h 298 (343)
T cd07878 294 EALAH 298 (343)
T ss_pred HHhcC
Confidence 99964
No 247
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=5.7e-36 Score=324.52 Aligned_cols=249 Identities=16% Similarity=0.196 Sum_probs=191.7
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCC---chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGEN---SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
.+.||+|+||.||+++.. +++.||+|++.+. .......+..|+.++..++|+||+++++++.+.+..++||||+++
T Consensus 6 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~ 85 (332)
T cd05623 6 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVG 85 (332)
T ss_pred EEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCC
Confidence 468999999999999954 5789999998653 122234578899999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|+|.+++..... .+++..++.++.||+.||+|||+.+|+||||||+|||++.++.+||+|||++.........
T Consensus 86 g~L~~~l~~~~~----~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~--- 158 (332)
T cd05623 86 GDLLTLLSKFED----RLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV--- 158 (332)
T ss_pred CcHHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCcc---
Confidence 999999876432 3899999999999999999999999999999999999999999999999998754321110
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc-----CCCCCCchhhHHHHHHHHHHHhCCc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR-----SIKPNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~-----~~~~~~~sDvwSlGvil~elltG~~ 710 (791)
.....+||+.|+|||++. ...++.++|||||||++|||++|+.
T Consensus 159 --------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~ 206 (332)
T cd05623 159 --------------------------------QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGET 206 (332)
T ss_pred --------------------------------eecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCC
Confidence 111245999999999986 3467899999999999999999999
Q ss_pred chhccccCCCCcchhchhHHHHHHHHhhhcCccc-hHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 003847 711 IVVDELGQGNGLLVEDKNRAIRLADAAIRADFEG-KEEALLSCFKLGYSCASPLPQK--RPSMKEALQA 776 (791)
Q Consensus 711 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 776 (791)
||...... .....+........++. .......+.+++.+|+..++++ |++++|+++.
T Consensus 207 Pf~~~~~~---------~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 207 PFYAESLV---------ETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred CCCCCCHH---------HHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 99653210 01111111110111111 1124567888999988665544 6899999876
No 248
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-37 Score=354.43 Aligned_cols=250 Identities=26% Similarity=0.320 Sum_probs=203.7
Q ss_pred cceeccccCceEEEEEE-eCCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 479 SAYILGASGSSIMYKAV-LEDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
.+..||.|.||.||.|. .++|+..|+|-++.. .....+...+|+.++..++|||+|+++|+-.+.+..+|.||||++
T Consensus 1239 rg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~ 1318 (1509)
T KOG4645|consen 1239 RGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEG 1318 (1509)
T ss_pred cccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhcc
Confidence 35789999999999999 778999999988654 233456788999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|+|.+.+...+. .++.....+..|++.|++|||+.|||||||||.||+++.+|.+|++|||.|..+........
T Consensus 1319 GsLa~ll~~gri-----~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~- 1392 (1509)
T KOG4645|consen 1319 GSLASLLEHGRI-----EDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMP- 1392 (1509)
T ss_pred CcHHHHHHhcch-----hhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcCC-
Confidence 999998876543 67777888999999999999999999999999999999999999999999998865421100
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC---CCCCchhhHHHHHHHHHHHhCCcch
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI---KPNPKWDVYSFGVILLELLTGKVIV 712 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~---~~~~~sDvwSlGvil~elltG~~pf 712 (791)
.......||+.|||||++.+. .-..++||||+|||+.||+||+.||
T Consensus 1393 -------------------------------~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW 1441 (1509)
T KOG4645|consen 1393 -------------------------------GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPW 1441 (1509)
T ss_pred -------------------------------HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCch
Confidence 122356799999999999763 3467899999999999999999999
Q ss_pred hccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 713 VDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
..-...|.-++ .+. . ....+.++....+-.+|+.+|+..||++|.++.|+++.
T Consensus 1442 ~~~dne~aIMy--------~V~-~--gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1442 AELDNEWAIMY--------HVA-A--GHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred hhccchhHHHh--------HHh-c--cCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 76544433221 111 1 11122333367788999999999999999999988764
No 249
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=5.3e-36 Score=324.55 Aligned_cols=249 Identities=16% Similarity=0.186 Sum_probs=192.0
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC---chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN---SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
.+.||+|+||.||+++. .+++.||+|++.+. .....+.+.+|+.++..++|+||+++++++.+.+..|+||||+++
T Consensus 6 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~g 85 (331)
T cd05624 6 IKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVG 85 (331)
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCC
Confidence 46899999999999995 46889999998653 222345578899999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|+|.+++..... .+++..+..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++.+......
T Consensus 86 g~L~~~l~~~~~----~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~--- 158 (331)
T cd05624 86 GDLLTLLSKFED----RLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTV--- 158 (331)
T ss_pred CcHHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCce---
Confidence 999999876432 3899999999999999999999999999999999999999999999999998765422110
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-----CCCCCchhhHHHHHHHHHHHhCCc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-----IKPNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-----~~~~~~sDvwSlGvil~elltG~~ 710 (791)
.....+||+.|+|||++.+ ..++.++|||||||++|||++|+.
T Consensus 159 --------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~ 206 (331)
T cd05624 159 --------------------------------QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGET 206 (331)
T ss_pred --------------------------------eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCC
Confidence 0112358999999999875 467899999999999999999999
Q ss_pred chhccccCCCCcchhchhHHHHHHHHhhhcCccc-hHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 003847 711 IVVDELGQGNGLLVEDKNRAIRLADAAIRADFEG-KEEALLSCFKLGYSCASPLPQK--RPSMKEALQA 776 (791)
Q Consensus 711 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 776 (791)
||...... .....+........++. ....+..+.+++.+|+..++++ |++++++++.
T Consensus 207 Pf~~~~~~---------~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 207 PFYAESLV---------ETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred CccCCCHH---------HHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 99643210 01111111110011111 1123567888999999876544 4688888754
No 250
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=3.2e-35 Score=306.44 Aligned_cols=247 Identities=22% Similarity=0.303 Sum_probs=200.2
Q ss_pred cceeccccCceEEEEEE-eCCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 479 SAYILGASGSSIMYKAV-LEDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
..++||+|+||.||.++ ..+++.+++|.+... .....+++.+|++++++++|+||+++++++.+.+..+++|||+++
T Consensus 4 ~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~ 83 (256)
T cd08221 4 PIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANG 83 (256)
T ss_pred EeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCC
Confidence 34689999999999998 456899999998643 344456788999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
++|.+++..... ..+++.++..++.|++.||+|||+.|++|+||||+||++++++.+||+|||++........
T Consensus 84 ~~L~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~---- 156 (256)
T cd08221 84 GTLYDKIVRQKG---QLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS---- 156 (256)
T ss_pred CcHHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccc----
Confidence 999999876532 2489999999999999999999999999999999999999999999999999886543221
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
......|++.|+|||.+.+..++.++||||||+++|||++|+.||...
T Consensus 157 --------------------------------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~ 204 (256)
T cd08221 157 --------------------------------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDAT 204 (256)
T ss_pred --------------------------------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCC
Confidence 011234788999999998888899999999999999999999998543
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCcc-chHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHh
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFE-GKEEALLSCFKLGYSCASPLPQKRPSMKEALQAL 777 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 777 (791)
.. .+.......+... ........+.+++.+||..+|++||+++|+++.+
T Consensus 205 ~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 205 NP-------------LNLVVKIVQGNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred CH-------------HHHHHHHHcCCCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 11 1111111112111 1122456788999999999999999999998763
No 251
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=2.5e-35 Score=310.75 Aligned_cols=253 Identities=23% Similarity=0.318 Sum_probs=197.9
Q ss_pred eeccccCceEEEEEEeC------CCcEEEEEEcCCCchh-hHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEecc
Q 003847 481 YILGASGSSIMYKAVLE------DGTALAVRRIGENSVD-RFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
..||+|+||.||+|+.+ +.+.|++|.+...... ..+.+.+|++++++++|+||+++++++.+.+..++||||+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 90 (275)
T cd05046 11 TTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYT 90 (275)
T ss_pred eeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEEec
Confidence 57999999999999853 3468999998765433 4578999999999999999999999999989999999999
Q ss_pred CCCChhHHHHhhcCCC----CCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCC
Q 003847 554 PNGSLANARYRKMGSS----PCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGD 629 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~----~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 629 (791)
++++|.+++....... ...+++..+..++.|++.||+|||+.+|+||||||+||+++.++.++++|||++......
T Consensus 91 ~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~ 170 (275)
T cd05046 91 DLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNS 170 (275)
T ss_pred CCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccccccccCcc
Confidence 9999999987654221 124899999999999999999999999999999999999999999999999998744221
Q ss_pred CCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-C
Q 003847 630 TSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-G 708 (791)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G 708 (791)
... ......++..|+|||.+.+..++.++||||||+++|+|++ |
T Consensus 171 ~~~-----------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~ 215 (275)
T cd05046 171 EYY-----------------------------------KLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQG 215 (275)
T ss_pred ccc-----------------------------------ccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCC
Confidence 100 0112235677999999988888999999999999999999 6
Q ss_pred CcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhcc
Q 003847 709 KVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779 (791)
Q Consensus 709 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 779 (791)
..||.+... ............. .......+..+.+++.+||+.+|++||++.|+++.|++
T Consensus 216 ~~p~~~~~~---------~~~~~~~~~~~~~--~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 216 ELPFYGLSD---------EEVLNRLQAGKLE--LPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred CCCccccch---------HHHHHHHHcCCcC--CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 778854211 0111111101110 11112245678899999999999999999999999864
No 252
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.3e-35 Score=345.94 Aligned_cols=250 Identities=21% Similarity=0.276 Sum_probs=191.9
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEcc--CceEEEEeccC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGV--DEKLIIYDFVP 554 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv~e~~~ 554 (791)
...||+|+||.||+|.. .+++.||+|.+... .......+..|+.++++++|||||+++++|... ...|+||||++
T Consensus 18 l~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~ 97 (1021)
T PTZ00266 18 IKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCD 97 (1021)
T ss_pred EEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCCC
Confidence 46899999999999995 46789999998653 233456789999999999999999999988654 46899999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-------CCeecCCCCCCeEecC----------------
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK-------KHVHGNLKPRNVLLGN---------------- 611 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~-------~ivHrDlkp~NILl~~---------------- 611 (791)
+|+|.+++...... ...+++..++.|+.||+.||+|||+. +||||||||+||||+.
T Consensus 98 gGSL~~lL~k~~~~-~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~n 176 (1021)
T PTZ00266 98 AGDLSRNIQKCYKM-FGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLN 176 (1021)
T ss_pred CCcHHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccC
Confidence 99999998764321 12499999999999999999999984 4999999999999964
Q ss_pred -CCCeEEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC--CC
Q 003847 612 -DMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS--IK 688 (791)
Q Consensus 612 -~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~--~~ 688 (791)
.+.+||+|||++..+..... .....||+.|+|||++.+ ..
T Consensus 177 g~~iVKLsDFGlAr~l~~~s~-------------------------------------~~s~vGTp~YmAPEvL~ge~~~ 219 (1021)
T PTZ00266 177 GRPIAKIGDFGLSKNIGIESM-------------------------------------AHSCVGTPYYWSPELLLHETKS 219 (1021)
T ss_pred CCCceEEccCCcccccccccc-------------------------------------ccccCCCccccCHHHHhccCCC
Confidence 23489999999976532110 112358999999999854 45
Q ss_pred CCCchhhHHHHHHHHHHHhCCcchhccccCCCCcchhchhHHHHHHHHhhh-cCccchHHHHHHHHHHHhhccCCCCCCC
Q 003847 689 PNPKWDVYSFGVILLELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIR-ADFEGKEEALLSCFKLGYSCASPLPQKR 767 (791)
Q Consensus 689 ~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~R 767 (791)
++.++||||||||+|||+||+.||..... ...+...... ...+ .......+.+||..||..+|.+|
T Consensus 220 ~s~KSDVWSLG~ILYELLTGk~PF~~~~~------------~~qli~~lk~~p~lp-i~~~S~eL~dLI~~~L~~dPeeR 286 (1021)
T PTZ00266 220 YDDKSDMWALGCIIYELCSGKTPFHKANN------------FSQLISELKRGPDLP-IKGKSKELNILIKNLLNLSAKER 286 (1021)
T ss_pred CCchhHHHHHHHHHHHHHHCCCCCCcCCc------------HHHHHHHHhcCCCCC-cCCCCHHHHHHHHHHhcCChhHC
Confidence 88999999999999999999999954211 0111111111 1111 11235678899999999999999
Q ss_pred CCHHHHHH--HhccC
Q 003847 768 PSMKEALQ--ALEKI 780 (791)
Q Consensus 768 Ps~~evl~--~L~~i 780 (791)
|++.|++. .+..+
T Consensus 287 PSa~QlL~h~~ik~i 301 (1021)
T PTZ00266 287 PSALQCLGYQIIKNV 301 (1021)
T ss_pred cCHHHHhccHHHhhc
Confidence 99999983 45443
No 253
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.2e-35 Score=314.79 Aligned_cols=256 Identities=20% Similarity=0.208 Sum_probs=191.1
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc--hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
.+.||+|++|.||+|+. .+++.||||++.... ....+.+.+|+.++++++||||+++++++..++..++||||++ +
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~ 83 (285)
T cd07861 5 IEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS-M 83 (285)
T ss_pred eeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-C
Confidence 35799999999999995 468999999986532 2234678899999999999999999999999999999999997 6
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++...... ..+++..++.++.|++.||+|||+.+|+||||||+||+++.++.+||+|||++........
T Consensus 84 ~l~~~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~----- 156 (285)
T cd07861 84 DLKKYLDSLPKG--QYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR----- 156 (285)
T ss_pred CHHHHHhcCCCC--CcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcc-----
Confidence 888887654321 2489999999999999999999999999999999999999999999999999875432110
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
......+++.|+|||++.+ ..++.++|||||||++|||+||+.||...
T Consensus 157 -------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~ 205 (285)
T cd07861 157 -------------------------------VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGD 205 (285)
T ss_pred -------------------------------cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 0112236788999998865 45789999999999999999999998653
Q ss_pred ccCCC------------CcchhchhHHHHHHHHhhhcCcc-----chHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 716 LGQGN------------GLLVEDKNRAIRLADAAIRADFE-----GKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 716 ~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
..... ............ .......... .......++.+++.+||+.||++|||+.++++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 206 SEIDQLFRIFRILGTPTEDVWPGVTSLPD-YKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred CHHHHHHHHHHHhCCCChhhhhcchhhHH-HHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 21000 000000000000 0000000000 00113456789999999999999999999975
No 254
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=3.2e-35 Score=308.39 Aligned_cols=247 Identities=21% Similarity=0.306 Sum_probs=190.6
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCC-----chhhHHHHHHHHHHHhccCCCCccceeeEEEcc--CceEEEE
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGEN-----SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGV--DEKLIIY 550 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv~ 550 (791)
..++||+|+||.||+|.. .+++.||+|++... .....+.+.+|+.++++++||||+++++++... ...++++
T Consensus 6 ~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~ 85 (266)
T cd06651 6 RGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFM 85 (266)
T ss_pred ccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEE
Confidence 356899999999999985 56899999998643 122345788999999999999999999988763 5678999
Q ss_pred eccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCC
Q 003847 551 DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 630 (791)
||+++++|.+++.... .+++..++.++.|++.||+|||+.+|+||||||+||+++.++.+||+|||+++.+....
T Consensus 86 e~~~~~~L~~~l~~~~-----~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~ 160 (266)
T cd06651 86 EYMPGGSVKDQLKAYG-----ALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC 160 (266)
T ss_pred eCCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccccccc
Confidence 9999999999887543 38899999999999999999999999999999999999999999999999987653211
Q ss_pred CCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCc
Q 003847 631 SSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~ 710 (791)
... .......|+..|+|||.+.+..++.++|||||||++|||++|+.
T Consensus 161 ~~~---------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~ 207 (266)
T cd06651 161 MSG---------------------------------TGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKP 207 (266)
T ss_pred ccC---------------------------------CccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCC
Confidence 000 00112347888999999998889999999999999999999999
Q ss_pred chhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 711 IVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 711 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
||..... .............. ..+......+.+++ +||..+|++||+++||++
T Consensus 208 pf~~~~~---------~~~~~~~~~~~~~~--~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 208 PWAEYEA---------MAAIFKIATQPTNP--QLPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred Cccccch---------HHHHHHHhcCCCCC--CCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 9864310 01111111000011 11222345566666 788899999999999975
No 255
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.9e-35 Score=308.11 Aligned_cols=245 Identities=22% Similarity=0.311 Sum_probs=199.2
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
.+.||+|+||.+|++.. .+|+.||+|.+... .....+++.+|++++++++|+||+++++++...+..++||||++++
T Consensus 5 ~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (256)
T cd08218 5 VKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGG 84 (256)
T ss_pred EEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCCC
Confidence 46899999999999994 56899999998643 2334567899999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++...... .+++.++..++.|++.||+|||+.+++|+||+|+||+++.++.++|+|||++.........
T Consensus 85 ~l~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~---- 157 (256)
T cd08218 85 DLYKKINAQRGV---LFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVEL---- 157 (256)
T ss_pred cHHHHHHhccCC---CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhh----
Confidence 999988764322 3789999999999999999999999999999999999999999999999998765422110
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
.....|++.|+|||+..+..++.++|+|||||++|+|++|+.||....
T Consensus 158 --------------------------------~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~ 205 (256)
T cd08218 158 --------------------------------ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN 205 (256)
T ss_pred --------------------------------hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC
Confidence 012237888999999998889999999999999999999999985421
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCcc-chHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFE-GKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
..+..+....+... ........+.+++.+||+.+|++||++.||++.
T Consensus 206 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 206 -------------MKNLVLKIIRGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred -------------HHHHHHHHhcCCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 11222222222221 122245678999999999999999999999873
No 256
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=4.9e-35 Score=308.93 Aligned_cols=243 Identities=21% Similarity=0.303 Sum_probs=197.5
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
...||+|+||.||+|.. .+++.||+|.+.... ......+.+|+.++++++|+||+++++++.+....++||||+++++
T Consensus 9 ~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 88 (277)
T cd06640 9 LERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGS 88 (277)
T ss_pred hhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCCc
Confidence 35799999999999995 468999999987542 3445788999999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++... ++++..+..++.|++.||+|||+.+++|+||+|+||+++.++.++|+|||++........
T Consensus 89 L~~~i~~~------~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~------ 156 (277)
T cd06640 89 ALDLLRAG------PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI------ 156 (277)
T ss_pred HHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCcc------
Confidence 99987642 388999999999999999999999999999999999999999999999999876542110
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELG 717 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~ 717 (791)
......++..|+|||++.+..++.++|+|||||++|||++|+.||.....
T Consensus 157 ------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~ 206 (277)
T cd06640 157 ------------------------------KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHP 206 (277)
T ss_pred ------------------------------ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcCh
Confidence 01123477889999999888899999999999999999999999865321
Q ss_pred CCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 718 QGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
... .......... ......+..+.+++.+||+.+|++||++.++++.
T Consensus 207 ~~~----------~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 207 MRV----------LFLIPKNNPP--TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred HhH----------hhhhhcCCCC--CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 100 1111111111 1122356778899999999999999999999765
No 257
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.2e-36 Score=322.75 Aligned_cols=242 Identities=21% Similarity=0.332 Sum_probs=206.6
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCCch--hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGENSV--DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
...||+|.|+.|..++ ..++..||||.+.+... ...+.+.+|+++|+.++|||||+++.+.......|+||||+.+|
T Consensus 61 ~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~g 140 (596)
T KOG0586|consen 61 IKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASGG 140 (596)
T ss_pred eeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccCc
Confidence 4579999999999999 45799999999987533 33456889999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
.+++++..... +.+..+..++.|+.+|++|||+++|||||||.+|||++.+.++||+|||++..+....
T Consensus 141 e~~~yl~~~gr-----~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~------ 209 (596)
T KOG0586|consen 141 ELFDYLVKHGR-----MKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGL------ 209 (596)
T ss_pred hhHHHHHhccc-----chhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeecccc------
Confidence 99999988764 6678899999999999999999999999999999999999999999999998775322
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCC-CCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKP-NPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~-~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
.....||++.|.|||++.+..| ++++|+||+|+++|-|+.|..||++.
T Consensus 210 -------------------------------~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~ 258 (596)
T KOG0586|consen 210 -------------------------------MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQ 258 (596)
T ss_pred -------------------------------cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCc
Confidence 2346789999999999999877 68999999999999999999999764
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
. +..+-++.+.+.+..+.-...++.+++++++..+|.+|++++++.+.
T Consensus 259 ~-------------lk~Lr~rvl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 259 N-------------LKELRPRVLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred c-------------cccccchheeeeecccceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence 2 22233334444444443356678899999999999999999999764
No 258
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.7e-35 Score=312.14 Aligned_cols=253 Identities=21% Similarity=0.301 Sum_probs=199.1
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
.+.||+|+||+||++.. ++|+.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++||||+++++
T Consensus 10 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 89 (284)
T cd06620 10 ISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGS 89 (284)
T ss_pred HHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCCC
Confidence 35799999999999995 468999999886543 3345678999999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE-KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
|.+++.... .+++..+..++.|++.||.|||+ .+++||||||+||+++.++.++|+|||++.......
T Consensus 90 L~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~------ 158 (284)
T cd06620 90 LDRIYKKGG-----PIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI------ 158 (284)
T ss_pred HHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc------
Confidence 999876643 38999999999999999999997 699999999999999999999999999976542111
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
.....|+..|+|||++.+..++.++|||||||++|+|++|+.||....
T Consensus 159 --------------------------------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~ 206 (284)
T cd06620 159 --------------------------------ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSN 206 (284)
T ss_pred --------------------------------cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccc
Confidence 012348889999999988889999999999999999999999997543
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCcc--chHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHh
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFE--GKEEALLSCFKLGYSCASPLPQKRPSMKEALQAL 777 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 777 (791)
...... .......+........... ........+.+++.+|++.||++||++.|+++..
T Consensus 207 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 207 IDDDGQ--DDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred hhhhhh--hhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 211100 0001111222222211111 0112446788999999999999999999999874
No 259
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=3.5e-35 Score=311.41 Aligned_cols=244 Identities=21% Similarity=0.332 Sum_probs=197.3
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
...||+|++|.||++.. .+++.||+|++........+.+.+|+.++++++|+||+++++++...+..++|+||+++++|
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L 103 (285)
T cd06648 24 FVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGAL 103 (285)
T ss_pred ceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCH
Confidence 36899999999999984 57899999998765555556788999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++... ++++..+..++.|++.||+|||+.||+||||||+||+++.++.++|+|||++........
T Consensus 104 ~~~~~~~------~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~------- 170 (285)
T cd06648 104 TDIVTHT------RMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP------- 170 (285)
T ss_pred HHHHHhC------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCc-------
Confidence 9988762 389999999999999999999999999999999999999999999999998775432110
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccccC
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQ 718 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~ 718 (791)
......|+..|+|||.+.+..++.++|||||||++|||++|+.||.....
T Consensus 171 -----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~- 220 (285)
T cd06648 171 -----------------------------RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP- 220 (285)
T ss_pred -----------------------------ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH-
Confidence 01123478889999999888899999999999999999999999864311
Q ss_pred CCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 719 GNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
......+ .................+.+++.+||+.+|++||++.++++
T Consensus 221 --------~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 221 --------LQAMKRI-RDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred --------HHHHHHH-HhcCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 0000111 11111111111114467899999999999999999999996
No 260
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.9e-35 Score=310.10 Aligned_cols=244 Identities=23% Similarity=0.345 Sum_probs=197.6
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
...||.|++|.||+|+. .+++.||+|.+.... ......+.+|++++++++|+||+++++++.+....++|+||+++++
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 85 (274)
T cd06609 6 LECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGS 85 (274)
T ss_pred hhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCCc
Confidence 35799999999999995 468999999987543 3445678999999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++... ++++..+..++.|++.||.|||+.+++||||+|+||++++++.++|+|||+++.+.....
T Consensus 86 L~~~~~~~------~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~------ 153 (274)
T cd06609 86 CLDLLKPG------KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS------ 153 (274)
T ss_pred HHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeeccccc------
Confidence 99988754 389999999999999999999999999999999999999999999999999987653211
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELG 717 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~ 717 (791)
......|+..|+|||.+.+..++.++||||||+++|||+||+.||.....
T Consensus 154 ------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~ 203 (274)
T cd06609 154 ------------------------------KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHP 203 (274)
T ss_pred ------------------------------ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCch
Confidence 01123478889999999988899999999999999999999999964321
Q ss_pred CCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 718 QGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
. .. ............... .....+.+++.+||..+|++||+++++++.
T Consensus 204 ~---------~~-~~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 204 M---------RV-LFLIPKNNPPSLEGN-KFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred H---------HH-HHHhhhcCCCCCccc-ccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 1 00 111111111111111 134578899999999999999999999873
No 261
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=5.3e-35 Score=304.79 Aligned_cols=248 Identities=28% Similarity=0.453 Sum_probs=198.1
Q ss_pred ceeccccCceEEEEEEeCC-----CcEEEEEEcCCCchh-hHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEecc
Q 003847 480 AYILGASGSSIMYKAVLED-----GTALAVRRIGENSVD-RFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~-----g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
.+.||.|+||.||++...+ +..||+|.+...... ..+.+..|++++++++|+||+++++++.+.+..+++|||+
T Consensus 4 ~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~ 83 (258)
T smart00219 4 GKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYM 83 (258)
T ss_pred cceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEecc
Confidence 3579999999999999543 488999999766443 5678999999999999999999999999999999999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
++++|.+++...... .+++..+..++.|++.||+|||+.+++||||||+||+++.++.++|+|||++..........
T Consensus 84 ~~~~l~~~~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 160 (258)
T smart00219 84 EGGDLLDYLRKNRPK---ELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYK 160 (258)
T ss_pred CCCCHHHHHHhhhhc---cCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccccccc
Confidence 999999998765432 18999999999999999999999999999999999999999999999999988765331100
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcch
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIV 712 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf 712 (791)
. ....++..|+|||.+.+..++.++||||+|+++|||++ |+.||
T Consensus 161 ~-----------------------------------~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~ 205 (258)
T smart00219 161 K-----------------------------------KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPY 205 (258)
T ss_pred c-----------------------------------ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCC
Confidence 0 01126778999999988889999999999999999998 77777
Q ss_pred hccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHh
Q 003847 713 VDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQAL 777 (791)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 777 (791)
..... ....+....... .......+.++.+++.+|+..||++|||+.|+++.|
T Consensus 206 ~~~~~----------~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 206 PGMSN----------EEVLEYLKKGYR--LPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred CCCCH----------HHHHHHHhcCCC--CCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 54211 111111111111 111222456788999999999999999999999875
No 262
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4e-35 Score=311.15 Aligned_cols=247 Identities=22% Similarity=0.355 Sum_probs=195.0
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
...||+|+||.||++... +++.||+|.+... .......+.+|++++++++|+||+++++++...+..++||||+++++
T Consensus 6 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 85 (286)
T cd06622 6 LDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGS 85 (286)
T ss_pred hhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCCC
Confidence 357999999999999964 7899999998754 33345678899999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE-KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
|..++...... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++..+.....
T Consensus 86 l~~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~----- 158 (286)
T cd06622 86 LDKLYAGGVAT--EGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLA----- 158 (286)
T ss_pred HHHHHHhcccc--CCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCcc-----
Confidence 99888764211 248999999999999999999997 6999999999999999999999999999876532110
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC------CCCCchhhHHHHHHHHHHHhCCc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI------KPNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~------~~~~~sDvwSlGvil~elltG~~ 710 (791)
....|+..|+|||.+.+. .++.++|||||||++|||++|+.
T Consensus 159 ---------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~ 205 (286)
T cd06622 159 ---------------------------------KTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRY 205 (286)
T ss_pred ---------------------------------ccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCC
Confidence 112377889999998553 34889999999999999999999
Q ss_pred chhccccCCCCcchhchhHHHHHHHHhhhcC-ccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 711 IVVDELGQGNGLLVEDKNRAIRLADAAIRAD-FEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 711 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
||...... ............. ..........+.+++.+||+.+|++||+++++++.
T Consensus 206 pf~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 206 PYPPETYA----------NIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred CCCCcchh----------hHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 98543111 0111111111111 11222356778899999999999999999999873
No 263
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=4.6e-35 Score=307.39 Aligned_cols=252 Identities=22% Similarity=0.343 Sum_probs=198.4
Q ss_pred cceeccccCceEEEEEE-eCCCcEEEEEEcCCCc------hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEe
Q 003847 479 SAYILGASGSSIMYKAV-LEDGTALAVRRIGENS------VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYD 551 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 551 (791)
....||+|++|.||++. ..+++.||+|.+.... ....+.+.+|++++++++|+||+++++++.+.+..++|||
T Consensus 4 ~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e 83 (268)
T cd06630 4 KGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVE 83 (268)
T ss_pred ccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEe
Confidence 34689999999999998 4678999999986532 1234678999999999999999999999999999999999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCC-CeEEeccCcccccCCCC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDM-EPKIGDFGLERLVTGDT 630 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~-~~kL~DFGla~~~~~~~ 630 (791)
|+++++|.+++.... ++++..+..++.|++.||+|||+.|++|+||||+||+++.++ .+||+|||.+.......
T Consensus 84 ~~~~~~L~~~l~~~~-----~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~ 158 (268)
T cd06630 84 WMAGGSVSHLLSKYG-----AFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKG 158 (268)
T ss_pred ccCCCcHHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccccc
Confidence 999999999987643 388999999999999999999999999999999999998776 59999999988765321
Q ss_pred CCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCc
Q 003847 631 SSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~ 710 (791)
.... .......|+..|+|||.+.+..++.++||||+|+++|+|++|+.
T Consensus 159 ~~~~--------------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~ 206 (268)
T cd06630 159 TGAG--------------------------------EFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKP 206 (268)
T ss_pred ccCC--------------------------------ccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCC
Confidence 1000 01112347889999999988889999999999999999999999
Q ss_pred chhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 711 IVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 711 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
||...... ............ ......+......+.+++.+|+..+|++||++.|+++
T Consensus 207 p~~~~~~~------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 207 PWNAEKHS------NHLALIFKIASA--TTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred CCCCCCCc------chHHHHHHHhcc--CCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 98543211 000011111110 1111222335678889999999999999999999985
No 264
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=3.1e-35 Score=312.67 Aligned_cols=239 Identities=22% Similarity=0.290 Sum_probs=195.2
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
.+.||+|++|.||++.. .+++.||+|.+.... ....+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 6 ~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 85 (290)
T cd05580 6 IKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPG 85 (290)
T ss_pred EEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCCC
Confidence 46899999999999995 468999999986532 23346788999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
++|.+++.... .+++..+..++.|++.||+|||+.||+||||+|+||+++.++.+||+|||++......
T Consensus 86 ~~L~~~~~~~~-----~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~------ 154 (290)
T cd05580 86 GELFSHLRKSG-----RFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR------ 154 (290)
T ss_pred CCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC------
Confidence 99999987653 3899999999999999999999999999999999999999999999999998765322
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
.....|++.|+|||.+.+..++.++||||||+++|+|++|+.||...
T Consensus 155 ---------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 201 (290)
T cd05580 155 ---------------------------------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDD 201 (290)
T ss_pred ---------------------------------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 01234788899999998888899999999999999999999998643
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRP-----SMKEALQ 775 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 775 (791)
.. .........+...........+.+++.+||..||.+|+ +++|+++
T Consensus 202 ~~-------------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 202 NP-------------IQIYEKILEGKVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred CH-------------HHHHHHHhcCCccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 20 01111111122222222456788999999999999999 6676653
No 265
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.4e-35 Score=317.13 Aligned_cols=255 Identities=18% Similarity=0.198 Sum_probs=190.0
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
...||+|+||.||+|+. .+++.||+|.+.... ......+.+|++++++++|+||+++++++..++..++||||++ ++
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~-~~ 89 (301)
T cd07873 11 LDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KD 89 (301)
T ss_pred eeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEeccc-cC
Confidence 45799999999999985 468999999986542 2223467789999999999999999999999999999999996 58
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++..... .+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++........
T Consensus 90 l~~~l~~~~~----~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~------ 159 (301)
T cd07873 90 LKQYLDDCGN----SINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK------ 159 (301)
T ss_pred HHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC------
Confidence 9888765432 388999999999999999999999999999999999999999999999999875432110
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
......+++.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 160 ------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~ 209 (301)
T cd07873 160 ------------------------------TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGST 209 (301)
T ss_pred ------------------------------cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 0112236788999999865 457889999999999999999999986532
Q ss_pred cCCCCcchh------chhHHHHHHHHhhhc--Ccc---------chHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 717 GQGNGLLVE------DKNRAIRLADAAIRA--DFE---------GKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 717 ~~~~~~~~~------~~~~~~~~~~~~~~~--~~~---------~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
.......+. .......+....... .++ ........+.+++.+|++.||.+|||++|+++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 210 VEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred HHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 110000000 000000000000000 000 00112446789999999999999999999987
No 266
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=6.2e-35 Score=306.05 Aligned_cols=246 Identities=21% Similarity=0.285 Sum_probs=191.7
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC-----chhhHHHHHHHHHHHhccCCCCccceeeEEEcc--CceEEEEe
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN-----SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGV--DEKLIIYD 551 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv~e 551 (791)
.++||+|+||.||++.. .+++.||||.+... .....+.+.+|++++++++||||+++++++.+. ...++|||
T Consensus 7 ~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e 86 (265)
T cd06652 7 GKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFME 86 (265)
T ss_pred eeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEE
Confidence 56899999999999995 56899999988532 122346788999999999999999999988764 45789999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTS 631 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 631 (791)
|+++++|.+++.... .+++..+..++.|++.||+|||+.+|+|+||||+||+++.++.+||+|||++........
T Consensus 87 ~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~ 161 (265)
T cd06652 87 HMPGGSIKDQLKSYG-----ALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICL 161 (265)
T ss_pred ecCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccccc
Confidence 999999999887543 278899999999999999999999999999999999999999999999999886532110
Q ss_pred CCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcc
Q 003847 632 SSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVI 711 (791)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~p 711 (791)
.. .......|+..|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 162 ~~---------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p 208 (265)
T cd06652 162 SG---------------------------------TGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPP 208 (265)
T ss_pred cc---------------------------------cccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCC
Confidence 00 011123488899999999888899999999999999999999999
Q ss_pred hhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 712 VVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 712 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
|.+... ............ ....+......+.+++.+|+. +|++||+++|+++
T Consensus 209 ~~~~~~---------~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 209 WAEFEA---------MAAIFKIATQPT--NPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred CCccch---------HHHHHHHhcCCC--CCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 854210 001111110000 111223355678889999995 9999999999975
No 267
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-36 Score=294.93 Aligned_cols=250 Identities=20% Similarity=0.219 Sum_probs=199.2
Q ss_pred HHHhhhcceeccccCceEEEEEE-eCCCcEEEEEEcCCCchhhHHHHHHHHHHHhcc-CCCCccceeeEEEc----cCce
Q 003847 473 ETLLKASAYILGASGSSIMYKAV-LEDGTALAVRRIGENSVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWG----VDEK 546 (791)
Q Consensus 473 ~~~~~~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~----~~~~ 546 (791)
.+-...+.++||-|-.|.|-.+. ..+|+.+|+|++... ...++|+++--.. .|||||.++++|++ ....
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL 134 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCL 134 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence 33344456799999999999998 557999999998654 4456778765554 69999999999875 3456
Q ss_pred EEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecC---CCCeEEeccCcc
Q 003847 547 LIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN---DMEPKIGDFGLE 623 (791)
Q Consensus 547 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~---~~~~kL~DFGla 623 (791)
.+|||.|+||.|...+..++.. .+++.++..|++||+.|+.|||+.+|.||||||+|+|... +-.+||+|||+|
T Consensus 135 LiVmE~meGGeLfsriq~~g~~---afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFA 211 (400)
T KOG0604|consen 135 LIVMECMEGGELFSRIQDRGDQ---AFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFA 211 (400)
T ss_pred EeeeecccchHHHHHHHHcccc---cchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccc
Confidence 7999999999999998887654 4999999999999999999999999999999999999964 456899999999
Q ss_pred cccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHH
Q 003847 624 RLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILL 703 (791)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ 703 (791)
+..... ......|-|++|.|||++...+|+..+|+||+||++|
T Consensus 212 K~t~~~-------------------------------------~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimY 254 (400)
T KOG0604|consen 212 KETQEP-------------------------------------GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMY 254 (400)
T ss_pred cccCCC-------------------------------------ccccCCcccccccCHHHhCchhcCCCCCccchhHHHH
Confidence 865421 1233456899999999999999999999999999999
Q ss_pred HHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccc----hHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 704 ELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEG----KEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 704 elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
-|++|.+||+...+.-. ..+ +......+.+.. +.+.+....++|+.+|..+|.+|.|+.|++..
T Consensus 255 IlLCGyPPFYS~hg~ai----spg-----Mk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 255 ILLCGYPPFYSNHGLAI----SPG-----MKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred HhhcCCCcccccCCccC----Chh-----HHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 99999999987654221 111 111222333332 33456778999999999999999999999863
No 268
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.1e-36 Score=320.79 Aligned_cols=240 Identities=24% Similarity=0.347 Sum_probs=196.5
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCC----CchhhHHHHHHHHHHHhccCCCCccceeeEEEccCc--eEEEEec
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGE----NSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDE--KLIIYDF 552 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~----~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~--~~lv~e~ 552 (791)
.++||+|+|-+||||.. .+|..||--.++. ......++|..|+.+|+.|+|+|||++|.+|.+... ..+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 46899999999999995 4577777433322 244456889999999999999999999999998765 6789999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc--CCCeecCCCCCCeEecC-CCCeEEeccCcccccCCC
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE--KKHVHGNLKPRNVLLGN-DMEPKIGDFGLERLVTGD 629 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~--~~ivHrDlkp~NILl~~-~~~~kL~DFGla~~~~~~ 629 (791)
+..|+|..|+.+.+. ++...++.|++||++||.|||+ ..|||||||-+||+|+. .|.|||+|+|+|......
T Consensus 125 ~TSGtLr~Y~kk~~~-----vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s 199 (632)
T KOG0584|consen 125 FTSGTLREYRKKHRR-----VNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS 199 (632)
T ss_pred ccCCcHHHHHHHhcc-----CCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcc
Confidence 999999999988764 8889999999999999999998 57999999999999975 589999999999987532
Q ss_pred CCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCC
Q 003847 630 TSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~ 709 (791)
. .....|||.|||||++. ..|++.+||||||+.++||+|+.
T Consensus 200 ~--------------------------------------aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~e 240 (632)
T KOG0584|consen 200 H--------------------------------------AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSE 240 (632)
T ss_pred c--------------------------------------cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhcc
Confidence 2 22467999999999998 58999999999999999999999
Q ss_pred cchhccccCCCCcchhchhHHHHHHHHhhhcCccchHH--HHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 710 VIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEE--ALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 710 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
.||..- ....+++.....+..+..-. ..+++.+||.+|+.. .++|||+.|+|+.
T Consensus 241 YPYsEC------------~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 241 YPYSEC------------TNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred CChhhh------------CCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 999542 22344555544443322111 235788999999999 8999999999874
No 269
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=4.9e-35 Score=309.21 Aligned_cols=242 Identities=20% Similarity=0.232 Sum_probs=186.1
Q ss_pred eccccCceEEEEEEe-CCCcEEEEEEcCCCch---hhHHHHHHHHHHH---hccCCCCccceeeEEEccCceEEEEeccC
Q 003847 482 ILGASGSSIMYKAVL-EDGTALAVRRIGENSV---DRFRDFETQVRVI---AKLVHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~---~~~~~~~~E~~~l---~~l~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
+||+|+||.||++.. .+++.||+|.+..... .....+.+|..++ ...+|+||+.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999995 5689999999865321 1122334444333 33479999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
+++|.+++.... .+++..+..++.|++.||+|||+.+|+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~L~~~i~~~~-----~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~---- 151 (279)
T cd05633 81 GGDLHYHLSQHG-----VFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---- 151 (279)
T ss_pred CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC----
Confidence 999999887543 38999999999999999999999999999999999999999999999999986543111
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc-CCCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR-SIKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~-~~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
.....||..|+|||.+. +..++.++||||+||++|||++|+.||.
T Consensus 152 ----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~ 197 (279)
T cd05633 152 ----------------------------------PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFR 197 (279)
T ss_pred ----------------------------------ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcC
Confidence 01124889999999986 4568999999999999999999999996
Q ss_pred ccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 003847 714 DELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRP-----SMKEALQA 776 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 776 (791)
...... ....... ...............+.+++.+||..||++|| +++|+++.
T Consensus 198 ~~~~~~-------~~~~~~~---~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 198 QHKTKD-------KHEIDRM---TLTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred CCCCcC-------HHHHHHH---hhcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 532210 0011111 11111112223556788999999999999999 69999874
No 270
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=5.5e-35 Score=310.86 Aligned_cols=244 Identities=21% Similarity=0.342 Sum_probs=197.4
Q ss_pred eeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCChh
Q 003847 481 YILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLA 559 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 559 (791)
..||+|+||.||++.. .+++.||||++..........+.+|+.++++++|+||+++++++...+..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 5799999999999985 578999999987655555677899999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCCc
Q 003847 560 NARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639 (791)
Q Consensus 560 ~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~ 639 (791)
+++... .+++..+..++.|++.||+|||+.|++||||||+||+++.++.++|+|||++........
T Consensus 106 ~~~~~~------~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~-------- 171 (292)
T cd06657 106 DIVTHT------RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-------- 171 (292)
T ss_pred HHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccc--------
Confidence 876542 388999999999999999999999999999999999999999999999998775432110
Q ss_pred cccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccccCC
Q 003847 640 RNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQG 719 (791)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~ 719 (791)
......|+..|+|||.+.+..++.++|+||+|+++|||++|+.||......
T Consensus 172 ----------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~- 222 (292)
T cd06657 172 ----------------------------RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL- 222 (292)
T ss_pred ----------------------------cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-
Confidence 011234788899999998888899999999999999999999998543110
Q ss_pred CCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 720 NGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
.......................+.+++.+||..+|.+||++.++++.
T Consensus 223 ---------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 223 ---------KAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred ---------HHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 111111112222221122245678899999999999999999999883
No 271
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=7.2e-35 Score=306.13 Aligned_cols=250 Identities=17% Similarity=0.224 Sum_probs=186.1
Q ss_pred eccccCceEEEEEEeCCC---cEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 482 ILGASGSSIMYKAVLEDG---TALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~~~~g---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
.||+|+||.||++...++ ..+++|.+.... ....+.+.+|+.+++.++||||+++++.+......++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 589999999999985433 456677776543 3345789999999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++...... ....++..++.++.||+.||+|||+.+++||||||+|||++.++.+||+|||++.........
T Consensus 82 L~~~l~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~----- 155 (268)
T cd05086 82 LKSYLSQEQWH-RRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYI----- 155 (268)
T ss_pred HHHHHHhhhcc-cccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhh-----
Confidence 99998765322 123677788899999999999999999999999999999999999999999997642211000
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-------CCCCCchhhHHHHHHHHHHHhC-C
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-------IKPNPKWDVYSFGVILLELLTG-K 709 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-------~~~~~~sDvwSlGvil~elltG-~ 709 (791)
.......|+..|+|||++.. ..++.++|||||||++|||+++ .
T Consensus 156 -----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~ 206 (268)
T cd05086 156 -----------------------------ETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAA 206 (268)
T ss_pred -----------------------------hcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCC
Confidence 00112347888999999743 2457899999999999999975 5
Q ss_pred cchhccccCCCCcchhchhHHHHHHHHhh----hcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhc
Q 003847 710 VIVVDELGQGNGLLVEDKNRAIRLADAAI----RADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALE 778 (791)
Q Consensus 710 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 778 (791)
.||..... ......+..... ..... ......+.+++..|| .+|++||++++|++.|.
T Consensus 207 ~p~~~~~~---------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 207 QPYSHLSD---------REVLNHVIKDQQVKLFKPQLE--LPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCCCCCCH---------HHHHHHHHhhcccccCCCccC--CCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 57743211 011111111110 01111 113456778888999 67999999999999874
No 272
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=6.7e-35 Score=307.10 Aligned_cols=255 Identities=22% Similarity=0.350 Sum_probs=195.5
Q ss_pred ceeccccCceEEEEEEeC----CCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccC------ceE
Q 003847 480 AYILGASGSSIMYKAVLE----DGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVD------EKL 547 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~~~ 547 (791)
.++||+|+||.||+|... +++.||||++... .....+++.+|++++++++||||+++++++...+ ..+
T Consensus 4 ~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 83 (273)
T cd05074 4 GRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPM 83 (273)
T ss_pred hhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceE
Confidence 457999999999999843 4689999998754 3344567889999999999999999999886543 237
Q ss_pred EEEeccCCCChhHHHHhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCccccc
Q 003847 548 IIYDFVPNGSLANARYRKMG-SSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLV 626 (791)
Q Consensus 548 lv~e~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 626 (791)
+++||+.+|+|.+++..... .....+++..++.++.|++.||+|||+.+|+||||||+||+++.++.+||+|||+++..
T Consensus 84 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~ 163 (273)
T cd05074 84 VILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKI 163 (273)
T ss_pred EEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccccccc
Confidence 89999999999988754321 22224789999999999999999999999999999999999999999999999998865
Q ss_pred CCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHH
Q 003847 627 TGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELL 706 (791)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ell 706 (791)
....... ......+++.|++||.+....++.++|||||||++|||+
T Consensus 164 ~~~~~~~----------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~ 209 (273)
T cd05074 164 YSGDYYR----------------------------------QGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIM 209 (273)
T ss_pred cCCccee----------------------------------cCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHh
Confidence 3221100 001122456799999998888999999999999999999
Q ss_pred h-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 707 T-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 707 t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
+ |+.||...... ......... ............+.+++.+||+.+|++||++.|+++.|+++
T Consensus 210 ~~g~~p~~~~~~~----------~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 210 TRGQTPYAGVENS----------EIYNYLIKG--NRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred hCCCCCCCCCCHH----------HHHHHHHcC--CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 9 78887543110 011111000 01111122456789999999999999999999999999876
No 273
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1e-34 Score=308.19 Aligned_cols=253 Identities=21% Similarity=0.283 Sum_probs=195.6
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEcc--CceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGV--DEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv~e~~~~ 555 (791)
.+.||.|++|.||++.. .+++.+|+|.+.... .....++.+|++++++++||||++++++|... +..++||||+++
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 85 (287)
T cd06621 6 LSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEG 85 (287)
T ss_pred EEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCC
Confidence 45899999999999996 468999999987542 23456789999999999999999999998654 367999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
++|.+++...... ...+++..+..++.|++.||+|||+.+++|+||+|+||+++.++.++|+|||++........
T Consensus 86 ~~L~~~l~~~~~~-~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~---- 160 (287)
T cd06621 86 GSLDSIYKKVKKR-GGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLA---- 160 (287)
T ss_pred CCHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccccccccc----
Confidence 9999987653321 22488999999999999999999999999999999999999999999999999875432110
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
....++..|+|||.+.+..++.++||||||+++|+|++|+.||...
T Consensus 161 ----------------------------------~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 206 (287)
T cd06621 161 ----------------------------------GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPE 206 (287)
T ss_pred ----------------------------------ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcc
Confidence 1123677899999999889999999999999999999999998654
Q ss_pred ccCCCCcchhchhHHHHHHH---HhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 716 LGQGNGLLVEDKNRAIRLAD---AAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
..... . .......+.. ..+.............+.+++.+||..+|++|||+.|+++
T Consensus 207 ~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 207 GEPPL-G---PIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred cCCCC-C---hHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 22100 0 0000111111 1111111111124567899999999999999999999998
No 274
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=7.8e-35 Score=303.35 Aligned_cols=245 Identities=22% Similarity=0.317 Sum_probs=196.9
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
....||+|+||.||++.. .+++.+|||.+... .....+.+.+|++++++++||||+++++.+...+..++||||+++
T Consensus 4 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd08220 4 KIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPG 83 (256)
T ss_pred EEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCC
Confidence 356899999999999984 57899999998654 233457889999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCC-CCeEEeccCcccccCCCCCCCc
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGND-MEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~-~~~kL~DFGla~~~~~~~~~~~ 634 (791)
++|.+++...... .+++..+..++.|++.||+|||++||+|+||||+||+++.+ +.+||+|||++........
T Consensus 84 ~~L~~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~--- 157 (256)
T cd08220 84 GTLAEYIQKRCNS---LLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK--- 157 (256)
T ss_pred CCHHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc---
Confidence 9999999765432 38999999999999999999999999999999999999855 4589999999886542211
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
.....|+..|+|||.+.+..++.++||||||+++|+|++|+.||..
T Consensus 158 ----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~ 203 (256)
T cd08220 158 ----------------------------------AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEA 203 (256)
T ss_pred ----------------------------------ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCccc
Confidence 1123478889999999988889999999999999999999999854
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCc-cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADF-EGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
.... ........... +........+.+++.+||..+|++|||+.|+++.
T Consensus 204 ~~~~-------------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 204 ANLP-------------ALVLKIMSGTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred CchH-------------HHHHHHHhcCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 3110 11111111111 1112245678899999999999999999999864
No 275
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-35 Score=286.28 Aligned_cols=254 Identities=20% Similarity=0.306 Sum_probs=198.8
Q ss_pred cchHHHhhhcceeccccCceEEEEEEe-CCCcEEEEEEcCCC-chhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCce
Q 003847 470 LELETLLKASAYILGASGSSIMYKAVL-EDGTALAVRRIGEN-SVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEK 546 (791)
Q Consensus 470 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~ 546 (791)
.++.++.. -..||.|..|.|++++. .+|..+|||.+.+. +.+..+++...++++.+- ++|+||+.+|||..+...
T Consensus 89 ~dindl~~--l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV 166 (391)
T KOG0983|consen 89 ADINDLEN--LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDV 166 (391)
T ss_pred cChHHhhh--HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchH
Confidence 34444443 34699999999999995 56899999999765 555567777888877665 599999999999999999
Q ss_pred EEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCeecCCCCCCeEecCCCCeEEeccCcccc
Q 003847 547 LIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE-KKHVHGNLKPRNVLLGNDMEPKIGDFGLERL 625 (791)
Q Consensus 547 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 625 (791)
++.||.| ...+..++.+-.+ ++++..+-++...+++||.||.+ ++|+|||+||+|||+|+.|++|+||||++..
T Consensus 167 ~IcMelM-s~C~ekLlkrik~----piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGr 241 (391)
T KOG0983|consen 167 FICMELM-STCAEKLLKRIKG----PIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGR 241 (391)
T ss_pred HHHHHHH-HHHHHHHHHHhcC----CchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccce
Confidence 9999998 3455555554432 48888888999999999999997 7999999999999999999999999999987
Q ss_pred cCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc---CCCCCCchhhHHHHHHH
Q 003847 626 VTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR---SIKPNPKWDVYSFGVIL 702 (791)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~---~~~~~~~sDvwSlGvil 702 (791)
+.+.. ..+...|.+.|||||.+. ...|+.++||||||+++
T Consensus 242 lvdSk-------------------------------------AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITl 284 (391)
T KOG0983|consen 242 LVDSK-------------------------------------AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITL 284 (391)
T ss_pred eeccc-------------------------------------ccccccCCccccCccccCCCCCCccchhhhhhhhccch
Confidence 65432 122345889999999985 35788999999999999
Q ss_pred HHHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 703 LELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 703 ~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
+||.||+.||.....+ -..+..+.+ ...+..+.....+..+++|+..||.+|+.+||...++++.
T Consensus 285 veLaTg~yPy~~c~td--------Fe~ltkvln-~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 285 VELATGQYPYKGCKTD--------FEVLTKVLN-EEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred hhhhcccCCCCCCCcc--------HHHHHHHHh-cCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 9999999999763211 112233333 2223333333366789999999999999999999998864
No 276
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=7.8e-35 Score=303.64 Aligned_cols=243 Identities=24% Similarity=0.368 Sum_probs=195.8
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCc-----hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEecc
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENS-----VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
.+.||+|++|.||+|... +++.|++|.+.... .+..+.+.+|++++++++|+||+++++++......++||||+
T Consensus 5 ~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (258)
T cd06632 5 GELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELV 84 (258)
T ss_pred cceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEec
Confidence 468999999999999965 78999999985432 234567899999999999999999999999999999999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
++++|.+++.... .+++..+..++.|++.||+|||+.||+|+||+|+||+++.++.+||+|||++........
T Consensus 85 ~~~~L~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~-- 157 (258)
T cd06632 85 PGGSLAKLLKKYG-----SFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSF-- 157 (258)
T ss_pred CCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceecccccc--
Confidence 9999999987543 388999999999999999999999999999999999999999999999999876532210
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCC-CCCchhhHHHHHHHHHHHhCCcch
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIK-PNPKWDVYSFGVILLELLTGKVIV 712 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~-~~~~sDvwSlGvil~elltG~~pf 712 (791)
.....|+..|+|||.+.... ++.++|+||||+++|+|++|+.||
T Consensus 158 -----------------------------------~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf 202 (258)
T cd06632 158 -----------------------------------AKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPW 202 (258)
T ss_pred -----------------------------------ccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCc
Confidence 11234788899999987766 899999999999999999999998
Q ss_pred hccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 713 VDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
..... ................ .......+.+++.+||+.+|++||++.++++
T Consensus 203 ~~~~~---------~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 203 SQLEG---------VAAVFKIGRSKELPPI--PDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred ccCcH---------HHHHHHHHhcccCCCc--CCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 55321 0111111110001111 1124567889999999999999999999975
No 277
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=6.8e-35 Score=309.32 Aligned_cols=249 Identities=20% Similarity=0.292 Sum_probs=190.1
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhcc-CCCCccceeeEEE-----ccCceEEEEec
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKL-VHPNLVRIRGFYW-----GVDEKLIIYDF 552 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~-----~~~~~~lv~e~ 552 (791)
...||+|+||.||++.. .+++.+|+|++..... ....+.+|+.+++++ +|+||+++++++. ..+..++||||
T Consensus 23 ~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~ 101 (286)
T cd06638 23 IETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD-IDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLEL 101 (286)
T ss_pred eeeeccCCCcEEEEEEECCCCceeEEEeeccccc-hHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEee
Confidence 35799999999999985 4689999998865322 235688899999999 6999999999884 33568999999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCC
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 632 (791)
+++++|.+++....... ..+++..+..++.|++.||.|||+.+|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 102 ~~~~~L~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~- 179 (286)
T cd06638 102 CNGGSVTDLVKGFLKRG-ERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRL- 179 (286)
T ss_pred cCCCCHHHHHHHhhccC-ccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCceeecccCCC-
Confidence 99999999876533221 2488999999999999999999999999999999999999999999999999886542111
Q ss_pred CcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc-----CCCCCCchhhHHHHHHHHHHHh
Q 003847 633 SKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR-----SIKPNPKWDVYSFGVILLELLT 707 (791)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~-----~~~~~~~sDvwSlGvil~ellt 707 (791)
......|++.|+|||++. +..++.++||||+||++|||++
T Consensus 180 -----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~ 224 (286)
T cd06638 180 -----------------------------------RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGD 224 (286)
T ss_pred -----------------------------------ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhc
Confidence 011224888999999975 3457889999999999999999
Q ss_pred CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 708 GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 708 G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
|+.||...... ....... ................+.+++.+||+.||++|||+.|+++.
T Consensus 225 g~~p~~~~~~~---------~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 225 GDPPLADLHPM---------RALFKIP-RNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred CCCCCCCCchh---------HHHhhcc-ccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 99998643210 0000000 00000000111123568899999999999999999999875
No 278
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1.4e-34 Score=304.12 Aligned_cols=251 Identities=24% Similarity=0.328 Sum_probs=196.4
Q ss_pred ceeccccCceEEEEEEeCC--CcEEEEEEcCCC----------chhhHHHHHHHHHHHhc-cCCCCccceeeEEEccCce
Q 003847 480 AYILGASGSSIMYKAVLED--GTALAVRRIGEN----------SVDRFRDFETQVRVIAK-LVHPNLVRIRGFYWGVDEK 546 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~--g~~vavK~~~~~----------~~~~~~~~~~E~~~l~~-l~H~nIv~l~~~~~~~~~~ 546 (791)
...||+|+||.||++.... ++.+|+|.+... ......++.+|+.++.+ ++|+||+++++++...+..
T Consensus 5 ~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 84 (269)
T cd08528 5 LEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDRL 84 (269)
T ss_pred hhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCeE
Confidence 4579999999999999654 789999988532 22234567788888875 7999999999999999999
Q ss_pred EEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCeecCCCCCCeEecCCCCeEEeccCcccc
Q 003847 547 LIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE-KKHVHGNLKPRNVLLGNDMEPKIGDFGLERL 625 (791)
Q Consensus 547 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 625 (791)
++||||+++++|.+++...... ...+++..++.++.|++.||.|||+ .+++|+||||+||+++.++.+||+|||.+..
T Consensus 85 ~lv~e~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~ 163 (269)
T cd08528 85 YIVMDLIEGAPLGEHFNSLKEK-KQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQ 163 (269)
T ss_pred EEEEecCCCCcHHHHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccceee
Confidence 9999999999999987543221 1248999999999999999999996 7899999999999999999999999999876
Q ss_pred cCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHH
Q 003847 626 VTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLEL 705 (791)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~el 705 (791)
..... ......|+..|+|||.+.+..++.++||||||+++|||
T Consensus 164 ~~~~~-------------------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l 206 (269)
T cd08528 164 KQPES-------------------------------------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQM 206 (269)
T ss_pred ccccc-------------------------------------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHH
Confidence 54221 01123478889999999988899999999999999999
Q ss_pred HhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhcc
Q 003847 706 LTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779 (791)
Q Consensus 706 ltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 779 (791)
++|+.||...... .......+...... . .......+.+++.+||+.||++||++.|+..++++
T Consensus 207 ~~g~~p~~~~~~~---------~~~~~~~~~~~~~~-~-~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 207 CTLQPPFYSTNML---------SLATKIVEAVYEPL-P-EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred HhCCCcccccCHH---------HHHHHHhhccCCcC-C-cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 9999998543110 01111111111110 1 11234678899999999999999999999999863
No 279
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=7e-35 Score=306.85 Aligned_cols=249 Identities=24% Similarity=0.350 Sum_probs=193.5
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCch----------hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEE
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSV----------DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLI 548 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~----------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~l 548 (791)
.+.||+|+||.||+|.. .+|+.||||.++.... ...+.+..|+.++++++|+||+++++++...+..++
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 85 (272)
T cd06629 6 GELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYLSI 85 (272)
T ss_pred cceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCceEE
Confidence 46899999999999984 4689999998853211 113467889999999999999999999999999999
Q ss_pred EEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCC
Q 003847 549 IYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTG 628 (791)
Q Consensus 549 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 628 (791)
||||+++++|.+++.... ++++..+..++.|++.||.|||+.+++||||||+||+++.++.++|+|||+++....
T Consensus 86 v~e~~~~~~L~~~l~~~~-----~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~ 160 (272)
T cd06629 86 FLEYVPGGSIGSCLRTYG-----RFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDD 160 (272)
T ss_pred EEecCCCCcHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccccc
Confidence 999999999999887652 389999999999999999999999999999999999999999999999999875432
Q ss_pred CCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCC--CCCchhhHHHHHHHHHHH
Q 003847 629 DTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIK--PNPKWDVYSFGVILLELL 706 (791)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~--~~~~sDvwSlGvil~ell 706 (791)
.... .......|+..|+|||.+.... ++.++|+||||+++||++
T Consensus 161 ~~~~----------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~ 206 (272)
T cd06629 161 IYDN----------------------------------DQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMF 206 (272)
T ss_pred cccc----------------------------------cccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHH
Confidence 1100 0011234788899999987654 789999999999999999
Q ss_pred hCCcchhccccCCCCcchhchhHHHHHHHHhhhcCcc--chHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 707 TGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFE--GKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 707 tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
+|+.||..... .....+..........+ ........+.+++.+||..+|++||++++|++.
T Consensus 207 ~g~~p~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 207 AGRRPWSDEEA---------IAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred hCCCCCcCcch---------HHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 99999853211 00011111111111111 111235678899999999999999999999863
No 280
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=7e-35 Score=307.79 Aligned_cols=244 Identities=20% Similarity=0.270 Sum_probs=192.4
Q ss_pred ccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 483 LGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 483 lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
||+|+||+||++.. .+|+.||+|.+.... ....+.+..|++++++++||||+++++++...+..|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 69999999999984 468999999986532 22234567899999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++...... .+++..+..++.|++.||.|||+.|++||||+|+||+++.++.+||+|||.+........
T Consensus 81 ~~~l~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~------- 150 (277)
T cd05577 81 KYHIYNVGEP---GFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKK------- 150 (277)
T ss_pred HHHHHHcCcC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCc-------
Confidence 9988765432 389999999999999999999999999999999999999999999999999876532110
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccccC
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQ 718 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~ 718 (791)
.....|+..|+|||++.+..++.++||||||+++|+|++|+.||......
T Consensus 151 ------------------------------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~ 200 (277)
T cd05577 151 ------------------------------IKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEK 200 (277)
T ss_pred ------------------------------cccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccc
Confidence 01123677899999998888999999999999999999999998653221
Q ss_pred CCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 003847 719 GNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRP-----SMKEALQ 775 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 775 (791)
.. . ..+..................+.+++.+||+.||++|| ++.++++
T Consensus 201 ~~------~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 201 VE------K---EELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred cc------H---HHHHhccccccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 00 0 11111111111112222456788999999999999999 6666764
No 281
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1e-34 Score=310.95 Aligned_cols=261 Identities=19% Similarity=0.232 Sum_probs=197.7
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
.+.||+|+||.||++.. .+++.||+|.+.... ....+.+.+|+++++.++||||+++++.+..++..++||||+++
T Consensus 6 ~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g 85 (305)
T cd05609 6 IKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEG 85 (305)
T ss_pred eeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCC
Confidence 46899999999999995 457899999987643 23345788999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
++|.+++.... .+++..+..++.|++.||+|||+.+++||||||+||+++.++.+||+|||+++...........
T Consensus 86 ~~L~~~l~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~ 160 (305)
T cd05609 86 GDCATLLKNIG-----ALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLY 160 (305)
T ss_pred CcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcccccc
Confidence 99999986643 3899999999999999999999999999999999999999999999999998742211110000
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
..... ............|+..|+|||.+.+..++.++|+|||||++|||++|+.||.+.
T Consensus 161 ~~~~~---------------------~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~ 219 (305)
T cd05609 161 EGHIE---------------------KDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD 219 (305)
T ss_pred ccccc---------------------cchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 00000 000000111245788999999998888999999999999999999999998643
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCc--c-chHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhcc
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADF--E-GKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 779 (791)
.. .++......... + .....+..+.+++.+||+.||++||++.++.+.|+.
T Consensus 220 ~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 220 TP-------------EELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred CH-------------HHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 11 111111111111 1 111245678899999999999999997777666654
No 282
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.7e-34 Score=310.88 Aligned_cols=275 Identities=21% Similarity=0.241 Sum_probs=201.7
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCchh---hHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENSVD---RFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
...||+|++|.||+|... +++.||+|.+...... ..+.+..|++++++++|+||+++++.+...+..++||||+.+
T Consensus 6 ~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 85 (316)
T cd05574 6 IKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPG 85 (316)
T ss_pred eeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCC
Confidence 457999999999999954 5899999999764322 456788999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
++|.+++..... ..+++..+..++.|++.||+|||+.|++||||||+||+++.++.++|+|||++............
T Consensus 86 ~~L~~~~~~~~~---~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 162 (316)
T cd05574 86 GELFRLLQRQPG---KCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSK 162 (316)
T ss_pred CCHHHHHHhCCC---CccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccccccc
Confidence 999998875432 24899999999999999999999999999999999999999999999999998865432211110
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
.... ...... .....................||..|+|||++.+..++.++||||||+++|+|++|+.||...
T Consensus 163 ~~~~-----~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~ 235 (316)
T cd05574 163 ALRK-----GSRRSS--VNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGS 235 (316)
T ss_pred cccc-----cccccc--ccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCC
Confidence 0000 000000 000000000001111223456899999999999888999999999999999999999998643
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCC----HHHHHH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPS----MKEALQ 775 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs----~~evl~ 775 (791)
... .....+..... .++........+.+++.+||..||++||+ ++|+++
T Consensus 236 ~~~---------~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 236 NRD---------ETFSNILKKEV--TFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred chH---------HHHHHHhcCCc--cCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 211 11111111111 11112124678899999999999999999 777766
No 283
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=7.1e-35 Score=310.29 Aligned_cols=245 Identities=23% Similarity=0.345 Sum_probs=198.0
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
.+.||+|+||.||++.. .+++.||+|.+........+.+.+|+.++++++||||+++++++...+..|+|+||+++++|
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L 103 (293)
T cd06647 24 FEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSL 103 (293)
T ss_pred eeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCCCcH
Confidence 45799999999999984 56889999998765555557789999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++... .+++..+..++.|++.||.|||+.|++||||||+||+++.++.+||+|||++........
T Consensus 104 ~~~~~~~------~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~------- 170 (293)
T cd06647 104 TDVVTET------CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS------- 170 (293)
T ss_pred HHHHhhc------CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc-------
Confidence 9988653 278999999999999999999999999999999999999999999999999875532111
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccccC
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQ 718 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~ 718 (791)
......|++.|+|||.+.+..++.++||||||+++|++++|+.||......
T Consensus 171 -----------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~ 221 (293)
T cd06647 171 -----------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL 221 (293)
T ss_pred -----------------------------ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChh
Confidence 011234788899999998888999999999999999999999999653221
Q ss_pred CCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 719 GNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
.....+. . ...............+.+++.+||..+|++||++.+++..
T Consensus 222 ~~~~~~~---------~-~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 222 RALYLIA---------T-NGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred hheeehh---------c-CCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1000000 0 0011111222244578899999999999999999999976
No 284
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=8e-35 Score=308.13 Aligned_cols=245 Identities=20% Similarity=0.305 Sum_probs=191.2
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhcc-CCCCccceeeEEEc------cCceEEEEe
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWG------VDEKLIIYD 551 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~------~~~~~lv~e 551 (791)
...||.|+||.||+|.. .+++.||+|++..... ...++..|+.+++++ +|+||+++++++.. ....+++||
T Consensus 21 ~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e 99 (282)
T cd06636 21 VEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTED-EEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVME 99 (282)
T ss_pred heeeccCCCeEEEEEEEcCCCcEEEEEEEecChH-HHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEE
Confidence 35899999999999995 5689999999865432 346788899999998 79999999999853 356799999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTS 631 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 631 (791)
|+++|+|.+++...... .+++..+..++.|++.||+|||+.+|+|+||||+||+++.++.++|+|||++........
T Consensus 100 ~~~~~~L~~~~~~~~~~---~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~ 176 (282)
T cd06636 100 FCGAGSVTDLVKNTKGN---ALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG 176 (282)
T ss_pred eCCCCcHHHHHHHccCC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhcccc
Confidence 99999999988764432 378888999999999999999999999999999999999999999999999876532110
Q ss_pred CCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc-----CCCCCCchhhHHHHHHHHHHH
Q 003847 632 SSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR-----SIKPNPKWDVYSFGVILLELL 706 (791)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~-----~~~~~~~sDvwSlGvil~ell 706 (791)
......|+..|+|||.+. +..++.++|||||||++|||+
T Consensus 177 ------------------------------------~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~ 220 (282)
T cd06636 177 ------------------------------------RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMA 220 (282)
T ss_pred ------------------------------------CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHH
Confidence 011234888999999985 356788999999999999999
Q ss_pred hCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 707 TGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 707 tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
+|+.||.+.... ...... ........ .....+..+.+++.+||..||.+||++.|+++
T Consensus 221 ~g~~p~~~~~~~---------~~~~~~-~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 221 EGAPPLCDMHPM---------RALFLI-PRNPPPKL-KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred hCCCCccccCHH---------hhhhhH-hhCCCCCC-cccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 999998653211 011111 11101111 11124567899999999999999999999975
No 285
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.7e-34 Score=306.16 Aligned_cols=255 Identities=21% Similarity=0.315 Sum_probs=191.4
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCc--hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
...||+|++|.||+|+.. +|+.||+|++.... ....+.+.+|++++++++|+||+++++++......++||||++++
T Consensus 6 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 85 (286)
T cd07847 6 LSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHT 85 (286)
T ss_pred eeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCcc
Confidence 357999999999999965 68999999986432 223356789999999999999999999999999999999999998
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|..++.... .+++..++.++.|++.||+|||+.|++||||||+||+++.++.+||+|||++.........
T Consensus 86 ~l~~~~~~~~-----~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~---- 156 (286)
T cd07847 86 VLNELEKNPR-----GVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDD---- 156 (286)
T ss_pred HHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCccc----
Confidence 8877654432 3899999999999999999999999999999999999999999999999999876432110
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
.....++..|+|||++.+ ..++.++||||||+++|||++|+.||.+.
T Consensus 157 --------------------------------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~ 204 (286)
T cd07847 157 --------------------------------YTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGK 204 (286)
T ss_pred --------------------------------ccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 012236778999999876 55789999999999999999999998653
Q ss_pred ccCCCCcchhc-----hhHHHHHHHH------hhhcCc---cc----hHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 716 LGQGNGLLVED-----KNRAIRLADA------AIRADF---EG----KEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 716 ~~~~~~~~~~~-----~~~~~~~~~~------~~~~~~---~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
........+.. ........+. ...... .. .......+.+++.+||+.+|++||++.|+++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 205 SDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred ChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 21100000000 0000000000 000000 00 0112456889999999999999999999875
No 286
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.7e-34 Score=302.32 Aligned_cols=250 Identities=25% Similarity=0.359 Sum_probs=197.7
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCch--hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSV--DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
.+.||+|+||.||++.. .+++.||+|.++.... ...+.+..|++++++++|+||+++++++...+..++|+||++++
T Consensus 5 ~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (264)
T cd06626 5 GNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGG 84 (264)
T ss_pred eeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCCC
Confidence 46899999999999985 4789999999876543 35678999999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++.... .+++..+..|+.|++.||+|||+.||+|+||+|+||++++++.+||+|||++............
T Consensus 85 ~L~~~~~~~~-----~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~- 158 (264)
T cd06626 85 TLEELLEHGR-----ILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGE- 158 (264)
T ss_pred cHHHHHhhcC-----CCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccc-
Confidence 9999887643 3788999999999999999999999999999999999999999999999998876432211000
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCC---CCCchhhHHHHHHHHHHHhCCcchh
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIK---PNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~---~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
......++..|+|||++.+.. ++.++||||||+++|||++|+.||.
T Consensus 159 -------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~ 207 (264)
T cd06626 159 -------------------------------EVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWS 207 (264)
T ss_pred -------------------------------cccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCcc
Confidence 011234788899999998766 8899999999999999999999996
Q ss_pred ccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 714 DELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
..... ....... ........+........+.+++.+||+.+|++||++.|++.
T Consensus 208 ~~~~~--------~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 208 ELDNE--------FQIMFHV-GAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred CCcch--------HHHHHHH-hcCCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 43111 0000010 00111111222123567789999999999999999999875
No 287
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-36 Score=324.87 Aligned_cols=260 Identities=25% Similarity=0.363 Sum_probs=212.6
Q ss_pred hcceeccccCceEEEEEEe-CCC----cEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEe
Q 003847 478 ASAYILGASGSSIMYKAVL-EDG----TALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYD 551 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~-~~g----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 551 (791)
....+||+|+||+||+|.+ ..| -+||+|++... ......++..|+-+|.+++|||++++++++.... ..||++
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence 3457899999999999983 333 47999998664 4455688999999999999999999999998765 789999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTS 631 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 631 (791)
||+.|+|.++++.++. .+-....+.|..|||+||.|||++++|||||-..|||+..-..+||.|||+++.+..+..
T Consensus 778 ~mP~G~LlDyvr~hr~----~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ 853 (1177)
T KOG1025|consen 778 LMPLGCLLDYVREHRD----NIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEK 853 (1177)
T ss_pred hcccchHHHHHHHhhc----cccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcccc
Confidence 9999999999988764 378889999999999999999999999999999999999999999999999999876654
Q ss_pred CCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCc
Q 003847 632 SSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKV 710 (791)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~ 710 (791)
....... .-.+.|||=|.+....|+.++|||||||++||++| |..
T Consensus 854 ey~~~~g----------------------------------K~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~ 899 (1177)
T KOG1025|consen 854 EYSAPGG----------------------------------KVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAK 899 (1177)
T ss_pred ccccccc----------------------------------ccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCC
Confidence 3222111 12345999999999999999999999999999998 888
Q ss_pred chhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCCCCCCc
Q 003847 711 IVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSSPSPYL 788 (791)
Q Consensus 711 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~p~~ 788 (791)
||.+...+.+...++... ..+.+.....+++.++.+||..|++.||+++++...+.++...|.-|+
T Consensus 900 Py~gi~~~eI~dlle~ge------------RLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardpqryl 965 (1177)
T KOG1025|consen 900 PYDGIPAEEIPDLLEKGE------------RLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDPQRYL 965 (1177)
T ss_pred ccCCCCHHHhhHHHhccc------------cCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCcceEe
Confidence 987653333322222221 133444477889999999999999999999999999998877765553
No 288
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=8.3e-35 Score=304.88 Aligned_cols=247 Identities=26% Similarity=0.366 Sum_probs=198.6
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
.+.||+|++|.||++... +++.||+|++.... ....+++.+|++++++++||||+++++++...+..++++||+++++
T Consensus 6 ~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 85 (265)
T cd06605 6 LGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGS 85 (265)
T ss_pred HHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCCc
Confidence 357999999999999964 68999999987653 3445678999999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE-KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
|.+++..... .+++..+..++.|++.||+|||+ .+++|+||||+||+++.++.+||+|||.+.........
T Consensus 86 L~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~---- 157 (265)
T cd06605 86 LDKILKEVQG----RIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAK---- 157 (265)
T ss_pred HHHHHHHccC----CCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhh----
Confidence 9999876531 48999999999999999999999 99999999999999999999999999998765321100
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
...|+..|+|||.+.+..++.++||||||+++|+|++|+.||....
T Consensus 158 ----------------------------------~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~ 203 (265)
T cd06605 158 ----------------------------------TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPEN 203 (265)
T ss_pred ----------------------------------cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccc
Confidence 1347788999999999899999999999999999999999986532
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCc-cchH-HHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADF-EGKE-EALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
.... ...+..+....... .... .....+.++|.+||..||++|||+.++++.
T Consensus 204 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 204 DPPD--------GIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred cccc--------cHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 1100 01111221111111 1111 145678899999999999999999999854
No 289
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.1e-34 Score=312.21 Aligned_cols=263 Identities=20% Similarity=0.247 Sum_probs=194.1
Q ss_pred ceeccccCceEEEEEEeC---CCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEcc--CceEEEEe
Q 003847 480 AYILGASGSSIMYKAVLE---DGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGV--DEKLIIYD 551 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv~e 551 (791)
...||+|++|.||+|... +++.||+|.+.... ....+.+.+|+.++++++||||+++++++.+. +..++|||
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 84 (316)
T cd07842 5 EGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFD 84 (316)
T ss_pred EEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEe
Confidence 357999999999999954 47999999997632 33346678899999999999999999999988 78999999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecC----CCCeEEeccCcccccC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN----DMEPKIGDFGLERLVT 627 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~----~~~~kL~DFGla~~~~ 627 (791)
|+++ +|.+++..........+++..++.++.|++.||+|||+.+|+||||||+||+++. ++.+||+|||++....
T Consensus 85 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~ 163 (316)
T cd07842 85 YAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFN 163 (316)
T ss_pred CCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccC
Confidence 9964 6777665443322235899999999999999999999999999999999999999 8999999999988654
Q ss_pred CCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHH
Q 003847 628 GDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELL 706 (791)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~ell 706 (791)
..... ........++..|+|||++.+ ..++.++|||||||++|||+
T Consensus 164 ~~~~~---------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~ 210 (316)
T cd07842 164 APLKP---------------------------------LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELL 210 (316)
T ss_pred CCccc---------------------------------ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 32110 001123457888999998866 45789999999999999999
Q ss_pred hCCcchhccccCCCCcchhchhHHHHHHH------------------------HhhhcCcc--chH-------HHHHHHH
Q 003847 707 TGKVIVVDELGQGNGLLVEDKNRAIRLAD------------------------AAIRADFE--GKE-------EALLSCF 753 (791)
Q Consensus 707 tG~~pf~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~--~~~-------~~~~~l~ 753 (791)
+|+.||....................++. ......++ ... .....+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (316)
T cd07842 211 TLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGF 290 (316)
T ss_pred hcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHH
Confidence 99999975433221000000000010000 00000000 000 1234688
Q ss_pred HHHhhccCCCCCCCCCHHHHHHH
Q 003847 754 KLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 754 ~li~~cl~~dP~~RPs~~evl~~ 776 (791)
+++.+|++.||++|||+.|+++.
T Consensus 291 ~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 291 DLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HHHHHHhcCCcccCcCHHHHhcC
Confidence 99999999999999999999853
No 290
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-35 Score=301.65 Aligned_cols=258 Identities=24% Similarity=0.325 Sum_probs=194.8
Q ss_pred ceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhc--cCCCCccceeeEEEccC----ceEEEEecc
Q 003847 480 AYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAK--LVHPNLVRIRGFYWGVD----EKLIIYDFV 553 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~~----~~~lv~e~~ 553 (791)
.+.||+|.||.||+|.++ |+.||||++..... +.+.+|.+|.+. |+|+||+.+++.-..++ +.|||++|.
T Consensus 216 ~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srdE---~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYH 291 (513)
T KOG2052|consen 216 QEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRDE---RSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYH 291 (513)
T ss_pred EEEecCccccceeecccc-CCceEEEEecccch---hhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecc
Confidence 468999999999999996 89999999976533 456777777775 59999999998755433 579999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc--------CCCeecCCCCCCeEecCCCCeEEeccCcccc
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE--------KKHVHGNLKPRNVLLGNDMEPKIGDFGLERL 625 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~--------~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 625 (791)
+.|||+||+.+.. ++.+..++++..+|.||+|||. ..|.|||||+.|||+..++.+.|+|+|+|..
T Consensus 292 e~GSL~DyL~r~t------v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~ 365 (513)
T KOG2052|consen 292 EHGSLYDYLNRNT------VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 365 (513)
T ss_pred cCCcHHHHHhhcc------CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEE
Confidence 9999999998853 8999999999999999999996 4699999999999999999999999999987
Q ss_pred cCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCC----C--CCchhhHHHH
Q 003847 626 VTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIK----P--NPKWDVYSFG 699 (791)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~----~--~~~sDvwSlG 699 (791)
...+...... .....+||..|||||++...- + -..+||||||
T Consensus 366 h~~~t~~idi--------------------------------~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafg 413 (513)
T KOG2052|consen 366 HDSDTDTIDI--------------------------------PPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFG 413 (513)
T ss_pred ecccCCcccC--------------------------------CCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHH
Confidence 6654322211 123456999999999996421 1 2368999999
Q ss_pred HHHHHHHhC----------CcchhccccCCCCcchhchhHHHHHHHHhhhcCcc---chHHHHHHHHHHHhhccCCCCCC
Q 003847 700 VILLELLTG----------KVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFE---GKEEALLSCFKLGYSCASPLPQK 766 (791)
Q Consensus 700 vil~elltG----------~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~ 766 (791)
.|+||+... +.||++-..... ..+++... +-...+++..+ ...+....+.++++.||..+|..
T Consensus 414 LVlWEiarRc~~ggi~eey~~Pyyd~Vp~DP--s~eeMrkV--VCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~a 489 (513)
T KOG2052|consen 414 LVLWEIARRCESGGIVEEYQLPYYDVVPSDP--SFEEMRKV--VCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAA 489 (513)
T ss_pred HHHHHHHHHhhcCCEehhhcCCcccCCCCCC--CHHHHhcc--eeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchh
Confidence 999998763 236655322211 11111110 11122222222 12336678899999999999999
Q ss_pred CCCHHHHHHHhccCCCC
Q 003847 767 RPSMKEALQALEKIPSS 783 (791)
Q Consensus 767 RPs~~evl~~L~~i~~~ 783 (791)
|.|+-.+.+.|.++..+
T Consensus 490 RltALriKKtl~~l~~~ 506 (513)
T KOG2052|consen 490 RLTALRIKKTLAKLSNS 506 (513)
T ss_pred hhHHHHHHHHHHHHhcC
Confidence 99999999999887643
No 291
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.9e-34 Score=306.80 Aligned_cols=249 Identities=22% Similarity=0.293 Sum_probs=191.4
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhcc-CCCCccceeeEEEccC-----ceEEEEec
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVD-----EKLIIYDF 552 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~-----~~~lv~e~ 552 (791)
...||+|+||.||++.. .+++.+|+|++..... ....+.+|+.+++++ +||||+++++++...+ ..++||||
T Consensus 27 ~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey 105 (291)
T cd06639 27 IETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD-VDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLEL 105 (291)
T ss_pred EEEeecCCCeEEEEEEECCCCCEEEEEEeccccc-HHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEE
Confidence 35799999999999995 5789999999865422 235678899999999 8999999999987543 57999999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCC
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 632 (791)
+++++|.+++...... ...+++..++.++.|++.||+|||+.+++||||||+||+++.++.+||+|||++.........
T Consensus 106 ~~~~sL~~~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~ 184 (291)
T cd06639 106 CNGGSVTELVKGLLIC-GQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLR 184 (291)
T ss_pred CCCCcHHHHHHHhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccchhccccccc
Confidence 9999999988653221 124899999999999999999999999999999999999999999999999998765421110
Q ss_pred CcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC-----CCCCchhhHHHHHHHHHHHh
Q 003847 633 SKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI-----KPNPKWDVYSFGVILLELLT 707 (791)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-----~~~~~sDvwSlGvil~ellt 707 (791)
.....|+..|+|||.+... .++.++|||||||++|||++
T Consensus 185 ------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~ 228 (291)
T cd06639 185 ------------------------------------RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGD 228 (291)
T ss_pred ------------------------------------ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhh
Confidence 0122478889999998543 36889999999999999999
Q ss_pred CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 708 GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 708 G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
|+.||..... .......... ..............+.+++.+||+.+|++||++.|+++.
T Consensus 229 g~~p~~~~~~---------~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 229 GDPPLFDMHP---------VKTLFKIPRN-PPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred CCCCCCCCcH---------HHHHHHHhcC-CCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 9999854311 0111111100 011111122244578899999999999999999999864
No 292
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2.6e-34 Score=300.69 Aligned_cols=248 Identities=22% Similarity=0.259 Sum_probs=196.9
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEc--cCceEEEEeccC
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG--VDEKLIIYDFVP 554 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--~~~~~lv~e~~~ 554 (791)
...||.|+||.||++. ..+++.||+|.+... .....+.+..|++++++++|+||+++++++.. ....+++|||++
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~ 84 (265)
T cd08217 5 LETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCE 84 (265)
T ss_pred eeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhcc
Confidence 3579999999999998 457899999998653 33345678899999999999999999998764 345789999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHh-----cCCCeecCCCCCCeEecCCCCeEEeccCcccccCCC
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLH-----EKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGD 629 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH-----~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 629 (791)
+++|.+++...... ..++++..++.++.|++.||+||| +.+|+|+||||+||+++.++.+||+|||++......
T Consensus 85 ~~~L~~~l~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~ 163 (265)
T cd08217 85 GGDLAQLIQKCKKE-RKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHD 163 (265)
T ss_pred CCCHHHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccCC
Confidence 99999998764321 225899999999999999999999 899999999999999999999999999998876432
Q ss_pred CCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCC
Q 003847 630 TSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~ 709 (791)
... .....|++.|+|||.+.+..++.++|+||||+++|+|++|+
T Consensus 164 ~~~------------------------------------~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~ 207 (265)
T cd08217 164 SSF------------------------------------AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALS 207 (265)
T ss_pred ccc------------------------------------ccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCC
Confidence 110 11234788899999999888999999999999999999999
Q ss_pred cchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 710 VIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 710 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
.||..... ....+......... ........+.+++.+|++.+|++||++++|++.
T Consensus 208 ~p~~~~~~----------~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 208 PPFTARNQ----------LQLASKIKEGKFRR--IPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred CcccCcCH----------HHHHHHHhcCCCCC--CccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 99865321 01111111111111 122355788999999999999999999999874
No 293
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.5e-34 Score=302.48 Aligned_cols=242 Identities=17% Similarity=0.220 Sum_probs=194.5
Q ss_pred ccccCceEEEEEEeC-CCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 483 LGASGSSIMYKAVLE-DGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 483 lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
||.|++|.||+++.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+++..++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999954 58999999986532 23446789999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++.... .+++..+..++.|++.||+|||+.+++|+||||+||+++.++.+||+|||++........
T Consensus 81 ~~~l~~~~-----~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~------- 148 (262)
T cd05572 81 WTILRDRG-----LFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQK------- 148 (262)
T ss_pred HHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccc-------
Confidence 99987653 289999999999999999999999999999999999999999999999999886643210
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccccC
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQ 718 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~ 718 (791)
.....|+..|+|||.+.+..++.++|+||+|+++|+|++|+.||.....+
T Consensus 149 ------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~ 198 (262)
T cd05572 149 ------------------------------TWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDED 198 (262)
T ss_pred ------------------------------cccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCC
Confidence 01224788899999998888999999999999999999999999654210
Q ss_pred CCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 003847 719 GNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPS-----MKEALQ 775 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 775 (791)
............ .....+......+.+++.+||..+|++||+ ++|+++
T Consensus 199 -------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 199 -------PMEIYNDILKGN--GKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred -------HHHHHHHHhccC--CCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 011111111111 111122223568899999999999999999 677665
No 294
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=5.8e-35 Score=309.53 Aligned_cols=253 Identities=21% Similarity=0.214 Sum_probs=188.8
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc--hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
...||+|+||.||+|+. .+|+.||+|++.... ......+.+|++++++++|+||+++++++.+.+..++|+||++ +
T Consensus 5 ~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~ 83 (284)
T cd07839 5 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCD-Q 83 (284)
T ss_pred EEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCC-C
Confidence 35799999999999995 478999999986532 2223567789999999999999999999999999999999996 5
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++..... .+++..++.++.||++||+|||+.+|+||||||+||+++.++.+||+|||+++........
T Consensus 84 ~l~~~~~~~~~----~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~---- 155 (284)
T cd07839 84 DLKKYFDSCNG----DIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRC---- 155 (284)
T ss_pred CHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCC----
Confidence 78877665332 3899999999999999999999999999999999999999999999999998755321110
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC-CCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI-KPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
.....++..|+|||++.+. .++.++|||||||++|||+||+.|+...
T Consensus 156 --------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~ 203 (284)
T cd07839 156 --------------------------------YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG 203 (284)
T ss_pred --------------------------------cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCC
Confidence 1122367889999998764 4689999999999999999999986432
Q ss_pred ccCCCCcchhc---------hh---HHHHHHHHhhhcCccc-------hHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 716 LGQGNGLLVED---------KN---RAIRLADAAIRADFEG-------KEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 716 ~~~~~~~~~~~---------~~---~~~~~~~~~~~~~~~~-------~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
.... ..... .. ......+......... .......+.+++.+||+.||.+|||++|+++
T Consensus 204 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 204 NDVD--DQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred CCHH--HHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 1100 00000 00 0000000000000000 0113456789999999999999999999976
No 295
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=3e-34 Score=302.97 Aligned_cols=244 Identities=21% Similarity=0.318 Sum_probs=196.1
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
....||+|+||.||+|.. .+++.||||.+.... ....+.+.+|++++++++||||+++++++..++..++||||++++
T Consensus 8 ~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 87 (277)
T cd06641 8 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGG 87 (277)
T ss_pred hheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCC
Confidence 345799999999999985 568999999986542 334567889999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++... .+++..+..++.|++.|++|||+.|++|+||||+||+++.++.++|+|||++..+.....
T Consensus 88 ~l~~~i~~~------~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~----- 156 (277)
T cd06641 88 SALDLLEPG------PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI----- 156 (277)
T ss_pred cHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchh-----
Confidence 999987642 389999999999999999999999999999999999999999999999999876532110
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
......|+..|+|||.+.+..++.++|+|||||++|+|++|..||....
T Consensus 157 -------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~ 205 (277)
T cd06641 157 -------------------------------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELH 205 (277)
T ss_pred -------------------------------hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccc
Confidence 0112347888999999988888999999999999999999999985421
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
.. ............. ........+.+++.+||..+|++||++.++++.
T Consensus 206 ~~----------~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 206 PM----------KVLFLIPKNNPPT--LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred hH----------HHHHHHhcCCCCC--CCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 10 0011111111111 112245678899999999999999999999984
No 296
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-36 Score=293.59 Aligned_cols=242 Identities=21% Similarity=0.253 Sum_probs=202.3
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
-.+||+|.||.|-.++ ..+|+.+|+|+++++. .+....-..|-++|+..+||.+..+.-.|+..+..|+||||..|
T Consensus 173 LKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeyanG 252 (516)
T KOG0690|consen 173 LKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYANG 252 (516)
T ss_pred HHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEEccC
Confidence 3589999999999999 6689999999998753 33344556788999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|.|.-++.+... +++...+-+-..|+.||.|||+++||.||||.+|.|+|.+|.+||+|||+++.--..
T Consensus 253 GeLf~HLsrer~-----FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~------ 321 (516)
T KOG0690|consen 253 GELFFHLSRERV-----FSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKY------ 321 (516)
T ss_pred ceEeeehhhhhc-----ccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcccc------
Confidence 999888776543 888888999999999999999999999999999999999999999999999853211
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
...++.+||||.|.|||++....|+.++|.|.+|||+|||++|+.||+..
T Consensus 322 ------------------------------g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~ 371 (516)
T KOG0690|consen 322 ------------------------------GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNK 371 (516)
T ss_pred ------------------------------cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCccccc
Confidence 12455789999999999999999999999999999999999999999754
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRP-----SMKEALQ 775 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 775 (791)
. . ..++.-.+......+.....+...|+..+|..||.+|. .++||.+
T Consensus 372 d----------h---~kLFeLIl~ed~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~ 423 (516)
T KOG0690|consen 372 D----------H---EKLFELILMEDLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMR 423 (516)
T ss_pred c----------h---hHHHHHHHhhhccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHh
Confidence 2 2 22333334444445555677888899999999999995 4555543
No 297
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.8e-34 Score=308.11 Aligned_cols=250 Identities=22% Similarity=0.248 Sum_probs=192.2
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchh-----hHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEecc
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVD-----RFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
...||+|++|.||+|.. .+|+.||||.+...... ....+..|++++++++|+||+++++++.+.+..++||||+
T Consensus 5 ~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (298)
T cd07841 5 GKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFM 84 (298)
T ss_pred eeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEccc
Confidence 45799999999999995 46899999999764322 2345778999999999999999999999999999999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
+++|.+++.... ..+++..+..++.||++||+|||+.||+|+||||+||+++.++.+||+|||+++........
T Consensus 85 -~~~L~~~i~~~~----~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~- 158 (298)
T cd07841 85 -ETDLEKVIKDKS----IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRK- 158 (298)
T ss_pred -CCCHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCcc-
Confidence 899999887643 13899999999999999999999999999999999999999999999999999876432110
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcch
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVIV 712 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~pf 712 (791)
.....++..|+|||.+.+ ..++.++|||||||++|||++|.++|
T Consensus 159 -----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~ 203 (298)
T cd07841 159 -----------------------------------MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFL 203 (298)
T ss_pred -----------------------------------ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccc
Confidence 011236778999998854 46789999999999999999997777
Q ss_pred hccccCCCCcchhchhHHHHHH---------------HHhh---hcCcc---chHHHHHHHHHHHhhccCCCCCCCCCHH
Q 003847 713 VDELGQGNGLLVEDKNRAIRLA---------------DAAI---RADFE---GKEEALLSCFKLGYSCASPLPQKRPSMK 771 (791)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~---------------~~~~---~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~ 771 (791)
....... ......... +... ....+ ........+.+++.+||+.||++|||++
T Consensus 204 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~ 277 (298)
T cd07841 204 PGDSDID------QLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITAR 277 (298)
T ss_pred cCCccHH------HHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHH
Confidence 5432100 000000000 0000 00000 0011346788999999999999999999
Q ss_pred HHHHH
Q 003847 772 EALQA 776 (791)
Q Consensus 772 evl~~ 776 (791)
|+++.
T Consensus 278 e~l~~ 282 (298)
T cd07841 278 QALEH 282 (298)
T ss_pred HHhhC
Confidence 99985
No 298
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2e-35 Score=335.77 Aligned_cols=263 Identities=25% Similarity=0.330 Sum_probs=189.4
Q ss_pred eeccccCceEEEEEE-eCCCcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEc----------------
Q 003847 481 YILGASGSSIMYKAV-LEDGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG---------------- 542 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~---------------- 542 (791)
.+||+||||.|||++ .-||+.||||+|.-. +......+.+|++.|.+|+|||||+++..|.+
T Consensus 485 ~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~~~~ 564 (1351)
T KOG1035|consen 485 ELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVASDSE 564 (1351)
T ss_pred HHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccccccchh
Confidence 489999999999999 448999999999765 33345678899999999999999999865420
Q ss_pred -------------------------------------------------c------------------------------
Q 003847 543 -------------------------------------------------V------------------------------ 543 (791)
Q Consensus 543 -------------------------------------------------~------------------------------ 543 (791)
.
T Consensus 565 ~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~~d~ 644 (1351)
T KOG1035|consen 565 SRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVILDD 644 (1351)
T ss_pred hhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCccccCc
Confidence 0
Q ss_pred ------------------------CceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCee
Q 003847 544 ------------------------DEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVH 599 (791)
Q Consensus 544 ------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivH 599 (791)
-..||-||||+..+|.+++.++... -.....++++++|++||.|+|+.||||
T Consensus 645 ~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~----~~~d~~wrLFreIlEGLaYIH~~giIH 720 (1351)
T KOG1035|consen 645 TSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN----SQRDEAWRLFREILEGLAYIHDQGIIH 720 (1351)
T ss_pred chhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc----hhhHHHHHHHHHHHHHHHHHHhCceee
Confidence 0137899999998888888776421 035678999999999999999999999
Q ss_pred cCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCccc
Q 003847 600 GNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYH 679 (791)
Q Consensus 600 rDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~ 679 (791)
|||||.||++|++..|||+|||+|+............. ..............+..+||..|+
T Consensus 721 RDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~------------------~~~~~~~g~~~~~~Ts~VGTalYv 782 (1351)
T KOG1035|consen 721 RDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDL------------------SFSTNRAGSNDGDLTSQVGTALYV 782 (1351)
T ss_pred ccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhcc------------------CccccccCCCCcccccccceeeee
Confidence 99999999999999999999999987431100000000 000001112223566788999999
Q ss_pred CcccccCC---CCCCchhhHHHHHHHHHHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHH
Q 003847 680 APESLRSI---KPNPKWDVYSFGVILLELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLG 756 (791)
Q Consensus 680 APE~~~~~---~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 756 (791)
|||++.+. .|+.|+|+||+|||++||+. ||...++ ....+..+-+..+........+....-.++|
T Consensus 783 APEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsME--------Ra~iL~~LR~g~iP~~~~f~~~~~~~e~slI 851 (1351)
T KOG1035|consen 783 APELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSME--------RASILTNLRKGSIPEPADFFDPEHPEEASLI 851 (1351)
T ss_pred cHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHH--------HHHHHHhcccCCCCCCcccccccchHHHHHH
Confidence 99999764 49999999999999999986 5644311 1111111112222111111122344556899
Q ss_pred hhccCCCCCCCCCHHHHHHH
Q 003847 757 YSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 757 ~~cl~~dP~~RPs~~evl~~ 776 (791)
+.|++.||.+||||.|+|+.
T Consensus 852 ~~Ll~hdP~kRPtA~eLL~s 871 (1351)
T KOG1035|consen 852 RWLLSHDPSKRPTATELLNS 871 (1351)
T ss_pred HHHhcCCCccCCCHHHHhhc
Confidence 99999999999999999863
No 299
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=2.4e-34 Score=305.01 Aligned_cols=257 Identities=24% Similarity=0.301 Sum_probs=193.9
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc--hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
...||+|++|.||+|.. .+|+.||||++.... ....+.+.+|+.++++++|+||+++++++......++||||+ ++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~~ 83 (286)
T cd07832 5 LGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-PS 83 (286)
T ss_pred EeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-CC
Confidence 46799999999999995 478999999987643 333467899999999999999999999999999999999999 99
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++..... .+++.+++.++.||+.||+|||+.|++|+||||+||+++.++.++|+|||++.........
T Consensus 84 ~L~~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~---- 155 (286)
T cd07832 84 DLSEVLRDEER----PLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPR---- 155 (286)
T ss_pred CHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCC----
Confidence 99998875442 4899999999999999999999999999999999999999999999999998865432110
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC-CCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI-KPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
......|+..|+|||.+.+. .++.++||||+|+++|||++|+++|...
T Consensus 156 -------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~ 204 (286)
T cd07832 156 -------------------------------LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGE 204 (286)
T ss_pred -------------------------------ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCC
Confidence 01123488889999998654 4689999999999999999998777543
Q ss_pred ccCCCCcch--------hchhH-HHHHHH--Hh-hhcCc-----cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 716 LGQGNGLLV--------EDKNR-AIRLAD--AA-IRADF-----EGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 716 ~~~~~~~~~--------~~~~~-~~~~~~--~~-~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
........+ ...+. ..++.+ .. ..... ....+....+.+++.+|+..+|++||+++++++.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 205 NDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred CHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 210000000 00000 000000 00 00000 0001134678899999999999999999999864
No 300
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=1e-34 Score=303.78 Aligned_cols=250 Identities=20% Similarity=0.279 Sum_probs=197.4
Q ss_pred ccccCceEEEEEEeC-CCcEEEEEEcCCCch---hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 483 LGASGSSIMYKAVLE-DGTALAVRRIGENSV---DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 483 lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
||+|+||.||+++.. +|+.||+|.+..... ...+.+.+|++++++++|+||+++++.+......|+||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999965 499999999976533 3456788999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++.... .+++..+..++.||+.||+|||+.+++||||+|+||+++.++.+||+|||++...........
T Consensus 81 ~~~l~~~~-----~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~---- 151 (265)
T cd05579 81 ASLLENVG-----SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINL---- 151 (265)
T ss_pred HHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccc----
Confidence 99987643 389999999999999999999999999999999999999999999999999875432211000
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccccC
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQ 718 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~ 718 (791)
...........++..|+|||......++.++||||||+++|||++|+.||.....
T Consensus 152 ------------------------~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~- 206 (265)
T cd05579 152 ------------------------NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP- 206 (265)
T ss_pred ------------------------ccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH-
Confidence 0000111234477889999999888889999999999999999999999854321
Q ss_pred CCCcchhchhHHHHHHHHhhhcCccchHHH--HHHHHHHHhhccCCCCCCCCCHHHHHHHhc
Q 003847 719 GNGLLVEDKNRAIRLADAAIRADFEGKEEA--LLSCFKLGYSCASPLPQKRPSMKEALQALE 778 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 778 (791)
.................. ...+.+++.+||+.+|++|||+.++.+.|+
T Consensus 207 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 207 ------------EEIFQNILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred ------------HHHHHHHhcCCcCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 111111111122222212 577899999999999999999966666554
No 301
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=2.8e-34 Score=301.10 Aligned_cols=252 Identities=23% Similarity=0.362 Sum_probs=199.1
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
.+.||.|+||.||+|.. .++..+|+|++.... ....+.+.+|+++++.++|+||+++++.+...+..++||||+++++
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~ 85 (267)
T cd06610 6 IEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGS 85 (267)
T ss_pred eeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCCc
Confidence 46799999999999994 468899999997542 3355789999999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++....... .+++..+..++.|++.||+|||+.||+||||||+||++++++.+||+|||++..+........
T Consensus 86 l~~~~~~~~~~~--~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~--- 160 (267)
T cd06610 86 LLDIMKSSYPRG--GLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTR--- 160 (267)
T ss_pred HHHHHHHhcccC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccc---
Confidence 999987653211 389999999999999999999999999999999999999999999999999887653321100
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC-CCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI-KPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
.......|+..|+|||++... .++.++|+|||||++|||++|+.||....
T Consensus 161 -----------------------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~ 211 (267)
T cd06610 161 -----------------------------KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYP 211 (267)
T ss_pred -----------------------------cccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccC
Confidence 011234588899999998776 78999999999999999999999996532
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCccc---hHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFEG---KEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
... ........ ....... .......+.+++.+||..||++||++.++++
T Consensus 212 ~~~---------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 212 PMK---------VLMLTLQN-DPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred hhh---------hHHHHhcC-CCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 210 00111110 0001111 1124567889999999999999999999986
No 302
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=2.5e-34 Score=302.68 Aligned_cols=248 Identities=22% Similarity=0.320 Sum_probs=193.4
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhcc-CCCCccceeeEEEccC------ceEEEEe
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVD------EKLIIYD 551 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~------~~~lv~e 551 (791)
...||+|++|.||+|.. .+++.+++|++..... ..+.+.+|+++++++ +|+||+++++++.... ..++|||
T Consensus 11 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e 89 (275)
T cd06608 11 VEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVME 89 (275)
T ss_pred eeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEE
Confidence 46899999999999996 4678999999876543 346789999999999 7999999999997654 4799999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTS 631 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 631 (791)
|+++++|.+++...... ...+++..+..++.|++.||+|||+.+++|+||+|+||+++.++.+||+|||++........
T Consensus 90 ~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~ 168 (275)
T cd06608 90 LCGGGSVTDLVKGLRKK-GKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLG 168 (275)
T ss_pred cCCCCcHHHHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccceecccchh
Confidence 99999999988754311 12489999999999999999999999999999999999999999999999999876532111
Q ss_pred CCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-----CCCCCchhhHHHHHHHHHHH
Q 003847 632 SSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-----IKPNPKWDVYSFGVILLELL 706 (791)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-----~~~~~~sDvwSlGvil~ell 706 (791)
......|+..|+|||++.. ..++.++|||||||++|+|+
T Consensus 169 ------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~ 212 (275)
T cd06608 169 ------------------------------------RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELA 212 (275)
T ss_pred ------------------------------------hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHH
Confidence 0112348889999998753 34678999999999999999
Q ss_pred hCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 707 TGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 707 tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
+|+.||.+... ......+.. ...............+.+++.+||..||++|||+.|+++
T Consensus 213 ~g~~p~~~~~~---------~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 213 DGKPPLCDMHP---------MRALFKIPR-NPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred hCCCCccccch---------HHHHHHhhc-cCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 99999964311 011111111 111111222224567889999999999999999999986
No 303
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-35 Score=304.72 Aligned_cols=241 Identities=19% Similarity=0.231 Sum_probs=197.5
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCCch---hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGENSV---DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
-.+||+||||.||-++ ..+|+.+|.|.+.+... ....-..+|-.+|.++..+.||.+--.|+.++..++|+..|.|
T Consensus 190 ~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNG 269 (591)
T KOG0986|consen 190 YRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNG 269 (591)
T ss_pred eEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecC
Confidence 3699999999999998 45799999999865422 2234567889999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|+|.-+|+..+.. .+++..++-++.+|+.||++||+.+||.||+||+|||+|+.|+++|+|+|+|..+.....
T Consensus 270 GDLkfHiyn~g~~---gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~---- 342 (591)
T KOG0986|consen 270 GDLKFHIYNHGNP---GFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKP---- 342 (591)
T ss_pred CceeEEeeccCCC---CCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCCCc----
Confidence 9999888877643 399999999999999999999999999999999999999999999999999998764321
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
....+||.+|||||++....|+...|.||+||++|||+.|+.||...
T Consensus 343 ---------------------------------~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~ 389 (591)
T KOG0986|consen 343 ---------------------------------IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQR 389 (591)
T ss_pred ---------------------------------cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhh
Confidence 22346999999999999999999999999999999999999999653
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCC
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPS 769 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 769 (791)
-.. ....++-...+.......+..+.+..+|.+..|..||++|.-
T Consensus 390 KeK---------vk~eEvdrr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLG 434 (591)
T KOG0986|consen 390 KEK---------VKREEVDRRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLG 434 (591)
T ss_pred hhh---------hhHHHHHHHHhcchhhcccccCHHHHHHHHHHHccCHHHhcc
Confidence 111 111122222222222233446678889999999999999963
No 304
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=3.5e-34 Score=299.77 Aligned_cols=246 Identities=24% Similarity=0.380 Sum_probs=200.6
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCch-hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENSV-DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
.+.||+|++|.||+|... +++.||||++..... ...+.+.+|++.+.+++|+||+++++++...+..++||||+++++
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 85 (264)
T cd06623 6 VKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGS 85 (264)
T ss_pred eeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCCc
Confidence 468999999999999965 599999999876543 446789999999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE-KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
|.+++.... .+++..+..++.|+++||+|||+ .+++||||+|+||+++.++.++|+|||++.........
T Consensus 86 L~~~l~~~~-----~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~---- 156 (264)
T cd06623 86 LADLLKKVG-----KIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ---- 156 (264)
T ss_pred HHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCc----
Confidence 999987652 38999999999999999999999 99999999999999999999999999998866432211
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
.....++..|+|||.+.+..++.++||||||+++|+|++|+.||....
T Consensus 157 --------------------------------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~ 204 (264)
T cd06623 157 --------------------------------CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPG 204 (264)
T ss_pred --------------------------------ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence 012337788999999998889999999999999999999999986542
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcC-ccchHH-HHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRAD-FEGKEE-ALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
.. . ..+......... ...... .+..+.+++.+||+.+|++||++.|+++.
T Consensus 205 ~~-------~---~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 205 QP-------S---FFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred cc-------C---HHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 10 0 011111111111 111122 45678999999999999999999999874
No 305
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=2.2e-34 Score=309.76 Aligned_cols=262 Identities=20% Similarity=0.219 Sum_probs=190.8
Q ss_pred eccccCceEEEEEEeCCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCChh
Q 003847 482 ILGASGSSIMYKAVLEDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLA 559 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 559 (791)
.+|.|+++.||++.. +++.||||++... .....+.+++|++++++++|+||+++++++...+..+++|||+++++|.
T Consensus 9 ~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 87 (314)
T cd08216 9 CFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCE 87 (314)
T ss_pred hhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHH
Confidence 344555555555544 6899999998754 3445678999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCCc
Q 003847 560 NARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639 (791)
Q Consensus 560 ~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~ 639 (791)
+++...... .+++..+..++.|++.||+|||+.+|+||||||+||+++.++.+||+|||.+............
T Consensus 88 ~~l~~~~~~---~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~---- 160 (314)
T cd08216 88 DLLKTHFPE---GLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRV---- 160 (314)
T ss_pred HHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccccc----
Confidence 998865332 3889999999999999999999999999999999999999999999999998765422111000
Q ss_pred cccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC--CCCCCchhhHHHHHHHHHHHhCCcchhcccc
Q 003847 640 RNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS--IKPNPKWDVYSFGVILLELLTGKVIVVDELG 717 (791)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~--~~~~~~sDvwSlGvil~elltG~~pf~~~~~ 717 (791)
.........++..|+|||++.. ..++.++|||||||++|||++|+.||.+...
T Consensus 161 -------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~ 215 (314)
T cd08216 161 -------------------------VHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPA 215 (314)
T ss_pred -------------------------cccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 0011123347788999999875 4588999999999999999999999964311
Q ss_pred CCC---------CcchhchhHHHH----------HHHH--hhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 718 QGN---------GLLVEDKNRAIR----------LADA--AIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 718 ~~~---------~~~~~~~~~~~~----------~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
... ...+........ ..+. ...............+.+++.+||..||++|||++++++.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 216 TQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred HHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 000 000000000000 0000 0000111122244678899999999999999999999874
No 306
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=2.4e-34 Score=304.80 Aligned_cols=256 Identities=21% Similarity=0.252 Sum_probs=190.2
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc--hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
...||.|++|.||+|+. .+|+.||||++.... ......+.+|++++++++||||+++++++.+.+..++||||+. +
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~ 83 (284)
T cd07860 5 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-Q 83 (284)
T ss_pred eeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-c
Confidence 45789999999999985 468999999987542 2233578899999999999999999999999999999999995 6
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++...... .+++..+..++.|++.||+|||+.+++||||+|+||+++.++.+||+|||++.........
T Consensus 84 ~l~~~~~~~~~~---~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~---- 156 (284)
T cd07860 84 DLKKFMDASPLS---GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT---- 156 (284)
T ss_pred CHHHHHHhCCCC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccc----
Confidence 898887654322 4899999999999999999999999999999999999999999999999998765321110
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCC-CCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIK-PNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~-~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
.....++..|+|||++.+.. ++.++||||||+++|||+||+.||...
T Consensus 157 --------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~ 204 (284)
T cd07860 157 --------------------------------YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 204 (284)
T ss_pred --------------------------------cccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 11123678899999887644 588999999999999999999998543
Q ss_pred ccCCCC-cchh-------chh-HHHHHHH--Hhhhc-Cccc----hHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 716 LGQGNG-LLVE-------DKN-RAIRLAD--AAIRA-DFEG----KEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 716 ~~~~~~-~~~~-------~~~-~~~~~~~--~~~~~-~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
...... .... ... ......+ ..... .... .......+.+++.+||+.||++||+++++++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 205 SEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred CHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 210000 0000 000 0000000 00000 0000 0012356778999999999999999999985
No 307
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=2e-34 Score=304.28 Aligned_cols=244 Identities=22% Similarity=0.322 Sum_probs=194.2
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC-chhhHHHHHHHHHHHhccC---CCCccceeeEEEccCceEEEEeccC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN-SVDRFRDFETQVRVIAKLV---HPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
.+.||+|+||.||+|.. .+++.||+|.+... .....+++.+|+.++++++ |||++++++++......++||||++
T Consensus 6 ~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06917 6 LELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAE 85 (277)
T ss_pred hhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCC
Confidence 45799999999999994 67899999998754 3334567889999999996 9999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
+++|.+++... .+++..+..++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||++.........
T Consensus 86 ~~~L~~~~~~~------~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~-- 157 (277)
T cd06917 86 GGSVRTLMKAG------PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSK-- 157 (277)
T ss_pred CCcHHHHHHcc------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccc--
Confidence 99999987543 3899999999999999999999999999999999999999999999999998866432210
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
.....|+..|+|||.+.+ ..++.++|||||||++|+|++|+.||.
T Consensus 158 ----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~ 203 (277)
T cd06917 158 ----------------------------------RSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYS 203 (277)
T ss_pred ----------------------------------cccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCC
Confidence 112348888999999865 456899999999999999999999996
Q ss_pred ccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 714 DELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
......... ............ ......+.+++.+||+.||++||++.|+++.
T Consensus 204 ~~~~~~~~~----------~~~~~~~~~~~~-~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 204 DVDAFRAMM----------LIPKSKPPRLED-NGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred CCChhhhhh----------ccccCCCCCCCc-ccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 532111000 000000011111 1144678899999999999999999999863
No 308
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=2.6e-34 Score=304.31 Aligned_cols=247 Identities=22% Similarity=0.319 Sum_probs=188.7
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc-hhhHHHHHHHHHH-HhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS-VDRFRDFETQVRV-IAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
.+.||+|+||.||+++. .+|+.||+|+++... .....++..|+.+ ++.++||||+++++++..++..++||||++ |
T Consensus 6 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~ 84 (283)
T cd06617 6 IEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMD-T 84 (283)
T ss_pred EEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhc-c
Confidence 45799999999999995 469999999987642 2233455556665 566789999999999999999999999996 6
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK-KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~-~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
+|.+++....... ..+++..++.++.|++.||+|||++ +++||||||+||+++.++.+||+|||++........
T Consensus 85 ~l~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~---- 159 (283)
T cd06617 85 SLDKFYKKVYDKG-LTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVA---- 159 (283)
T ss_pred cHHHHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccccc----
Confidence 8888876543222 3589999999999999999999997 999999999999999999999999999876532110
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC----CCCCCchhhHHHHHHHHHHHhCCcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS----IKPNPKWDVYSFGVILLELLTGKVI 711 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~----~~~~~~sDvwSlGvil~elltG~~p 711 (791)
.....|+..|+|||.+.+ ..++.++|+|||||++|||++|+.|
T Consensus 160 ---------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p 206 (283)
T cd06617 160 ---------------------------------KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFP 206 (283)
T ss_pred ---------------------------------cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCC
Confidence 011237888999998864 4568899999999999999999999
Q ss_pred hhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 712 VVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 712 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
|..... ........... .....+ ....+..+.+++.+||..+|++||++.++++
T Consensus 207 ~~~~~~--------~~~~~~~~~~~-~~~~~~-~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 207 YDSWKT--------PFQQLKQVVEE-PSPQLP-AEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred CCcccc--------CHHHHHHHHhc-CCCCCC-ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 853211 00111111111 111111 1124567889999999999999999999987
No 309
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=2.6e-34 Score=303.60 Aligned_cols=241 Identities=19% Similarity=0.225 Sum_probs=185.7
Q ss_pred eccccCceEEEEEEe-CCCcEEEEEEcCCCch---hhHHHHHHHH---HHHhccCCCCccceeeEEEccCceEEEEeccC
Q 003847 482 ILGASGSSIMYKAVL-EDGTALAVRRIGENSV---DRFRDFETQV---RVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~---~~~~~~~~E~---~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
+||+|+||.||++.. .+++.||+|.+..... .....+..|. +.++...||+|+++++++...+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999985 5689999999865321 1112233343 34445689999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
+++|.+++.... .+++..++.|+.|++.||+|||+.+|+||||||+||+++.++.+||+|||++.......
T Consensus 81 g~~L~~~l~~~~-----~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~---- 151 (278)
T cd05606 81 GGDLHYHLSQHG-----VFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---- 151 (278)
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC----
Confidence 999998876542 38999999999999999999999999999999999999999999999999987543110
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
.....|+..|+|||.+.+ ..++.++||||+||++|||++|+.||.
T Consensus 152 ----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~ 197 (278)
T cd05606 152 ----------------------------------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFR 197 (278)
T ss_pred ----------------------------------CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCC
Confidence 012248889999999875 468999999999999999999999996
Q ss_pred ccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 003847 714 DELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRP-----SMKEALQ 775 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 775 (791)
+...... ..............+...+..+.+++.+|+..+|.+|| ++.++++
T Consensus 198 ~~~~~~~----------~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 198 QHKTKDK----------HEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred CCCccch----------HHHHHHhhccCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 5422110 00101111111111222456788999999999999999 9999985
No 310
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=4.4e-34 Score=306.41 Aligned_cols=241 Identities=24% Similarity=0.362 Sum_probs=190.7
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC---chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN---SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
...||+|+||.||+|.. .+++.||+|.+... .....+.+.+|+++++.++||||+++++++...+..++||||++
T Consensus 20 ~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~- 98 (307)
T cd06607 20 LREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCL- 98 (307)
T ss_pred heeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhC-
Confidence 46799999999999995 46899999998643 23344678899999999999999999999999999999999996
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|++.+++..... .+++..+..++.|++.||.|||+.+|+||||+|+||+++.++.+||+|||++......
T Consensus 99 g~l~~~~~~~~~----~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~------ 168 (307)
T cd06607 99 GSASDILEVHKK----PLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA------ 168 (307)
T ss_pred CCHHHHHHHccc----CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCC------
Confidence 577776654332 3899999999999999999999999999999999999999999999999998754311
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc---CCCCCCchhhHHHHHHHHHHHhCCcch
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR---SIKPNPKWDVYSFGVILLELLTGKVIV 712 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~---~~~~~~~sDvwSlGvil~elltG~~pf 712 (791)
....|+..|+|||++. ...++.++||||||+++|||++|+.||
T Consensus 169 ----------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~ 214 (307)
T cd06607 169 ----------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 214 (307)
T ss_pred ----------------------------------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCC
Confidence 1123777899999874 456889999999999999999999998
Q ss_pred hccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 713 VDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
...... ......... ..... ........+.+++.+||+.+|++||++.+++..
T Consensus 215 ~~~~~~---------~~~~~~~~~-~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 215 FNMNAM---------SALYHIAQN-DSPTL-SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred CCccHH---------HHHHHHhcC-CCCCC-CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 543110 001111100 00111 112245678999999999999999999999874
No 311
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=7e-34 Score=306.24 Aligned_cols=249 Identities=22% Similarity=0.341 Sum_probs=195.3
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC---chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN---SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
...||+|+||.||+++. .+++.||+|++... .....+.+.+|++++++++|+|++++++++...+..++||||+.
T Consensus 30 ~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~- 108 (317)
T cd06635 30 LREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCL- 108 (317)
T ss_pred hheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCC-
Confidence 45799999999999994 56899999998643 23344678899999999999999999999999999999999996
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|+|.+.+..... ++++.++..++.|++.||.|||+.+|+||||+|+||+++.++.+||+|||++......
T Consensus 109 g~l~~~~~~~~~----~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~------ 178 (317)
T cd06635 109 GSASDLLEVHKK----PLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA------ 178 (317)
T ss_pred CCHHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCCc------
Confidence 578777654432 3899999999999999999999999999999999999999999999999987653211
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc---CCCCCCchhhHHHHHHHHHHHhCCcch
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR---SIKPNPKWDVYSFGVILLELLTGKVIV 712 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~---~~~~~~~sDvwSlGvil~elltG~~pf 712 (791)
....|+..|+|||++. ...++.++|||||||++|||++|+.||
T Consensus 179 ----------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~ 224 (317)
T cd06635 179 ----------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 224 (317)
T ss_pred ----------------------------------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCC
Confidence 1123788899999973 456889999999999999999999998
Q ss_pred hccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCCC
Q 003847 713 VDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSSP 784 (791)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 784 (791)
.... .......+...... . .........+.+++.+||+.+|.+||++.++++.+-.+...+
T Consensus 225 ~~~~---------~~~~~~~~~~~~~~-~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 285 (317)
T cd06635 225 FNMN---------AMSALYHIAQNESP-T-LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERP 285 (317)
T ss_pred CCcc---------HHHHHHHHHhccCC-C-CCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCc
Confidence 5431 01111111111111 1 111224567889999999999999999999998765444433
No 312
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=4.9e-34 Score=303.59 Aligned_cols=252 Identities=19% Similarity=0.259 Sum_probs=188.4
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCchh-hHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENSVD-RFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
...||+|++|.||+|..+ +++.||||.+...... ....+.+|++++++++|+||+++++++.+.+..++||||+. ++
T Consensus 10 ~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~ 88 (291)
T cd07844 10 LDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLD-TD 88 (291)
T ss_pred EEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCC-CC
Confidence 468999999999999954 6899999998654221 22456789999999999999999999999999999999997 48
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++..... .+++..++.++.|++.||+|||+.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 89 L~~~~~~~~~----~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~------ 158 (291)
T cd07844 89 LKQYMDDCGG----GLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK------ 158 (291)
T ss_pred HHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCc------
Confidence 9988875432 389999999999999999999999999999999999999999999999999865321110
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
......++..|+|||++.+ ..++.++||||+|+++|||++|+.||.+..
T Consensus 159 ------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~ 208 (291)
T cd07844 159 ------------------------------TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGST 208 (291)
T ss_pred ------------------------------cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCc
Confidence 0011236778999999875 457899999999999999999999985432
Q ss_pred cCCCCcchhc---------hhHHHHHH--------------HHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 003847 717 GQGNGLLVED---------KNRAIRLA--------------DAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEA 773 (791)
Q Consensus 717 ~~~~~~~~~~---------~~~~~~~~--------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 773 (791)
... ..+.. ........ ...+....... .....+.+++.+|++.+|++||++.|+
T Consensus 209 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~~p~~Rps~~e~ 285 (291)
T cd07844 209 DVE--DQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRL-DRIPHGEELALKFLQYEPKKRISAAEA 285 (291)
T ss_pred cHH--HHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCC-CCchhHHHHHHHHhccCcccccCHHHH
Confidence 100 00000 00000000 00000000000 012567899999999999999999998
Q ss_pred HH
Q 003847 774 LQ 775 (791)
Q Consensus 774 l~ 775 (791)
++
T Consensus 286 l~ 287 (291)
T cd07844 286 MK 287 (291)
T ss_pred hc
Confidence 75
No 313
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=4.5e-34 Score=303.08 Aligned_cols=246 Identities=24% Similarity=0.374 Sum_probs=198.5
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
...||+|++|.||++... +++.||+|++..... ..+.+.+|++++++++|+||+++++++...+..++|+||+++++|
T Consensus 24 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 102 (286)
T cd06614 24 LEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSL 102 (286)
T ss_pred hHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCCCcH
Confidence 357999999999999965 689999999976544 457788999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++..... .+++..+..++.|++.||+|||+.||+|+||||+||+++.++.++|+|||++........
T Consensus 103 ~~~l~~~~~----~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~------- 171 (286)
T cd06614 103 TDIITQNFV----RMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS------- 171 (286)
T ss_pred HHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchh-------
Confidence 999987641 389999999999999999999999999999999999999999999999999865432110
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccccC
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQ 718 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~ 718 (791)
......++..|+|||++.+..++.++|||||||++|+|++|+.||......
T Consensus 172 -----------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~ 222 (286)
T cd06614 172 -----------------------------KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL 222 (286)
T ss_pred -----------------------------hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH
Confidence 011223778899999998888999999999999999999999998542110
Q ss_pred CCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 719 GNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
........... ............+.+++.+||+.+|.+||++.++++.
T Consensus 223 ---------~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 223 ---------RALFLITTKGI-PPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred ---------HHHHHHHhcCC-CCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 01111111111 1111122245678899999999999999999999863
No 314
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1e-34 Score=330.44 Aligned_cols=262 Identities=18% Similarity=0.163 Sum_probs=181.7
Q ss_pred cceeccccCceEEEEEEeCC--CcEEEEEEc--------------C---CCchhhHHHHHHHHHHHhccCCCCccceeeE
Q 003847 479 SAYILGASGSSIMYKAVLED--GTALAVRRI--------------G---ENSVDRFRDFETQVRVIAKLVHPNLVRIRGF 539 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~--g~~vavK~~--------------~---~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~ 539 (791)
....||+|+||.||++..+. +..+++|.+ . .........+++|++++++++|+||++++++
T Consensus 152 ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~ 231 (501)
T PHA03210 152 VIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILKIEEI 231 (501)
T ss_pred EEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCcEeEE
Confidence 34689999999999987432 222222211 0 0112234568899999999999999999999
Q ss_pred EEccCceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEec
Q 003847 540 YWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGD 619 (791)
Q Consensus 540 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~D 619 (791)
+...+..|+|+|++. ++|.+++...............++.|+.||+.||+|||++|||||||||+|||++.++.+||+|
T Consensus 232 ~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~vkL~D 310 (501)
T PHA03210 232 LRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIVLGD 310 (501)
T ss_pred EEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEe
Confidence 999999999999994 6777776544322111244667888999999999999999999999999999999999999999
Q ss_pred cCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHH
Q 003847 620 FGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFG 699 (791)
Q Consensus 620 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlG 699 (791)
||+++.+...... ......||..|+|||++.+..++.++||||||
T Consensus 311 FGla~~~~~~~~~-----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 355 (501)
T PHA03210 311 FGTAMPFEKEREA-----------------------------------FDYGWVGTVATNSPEILAGDGYCEITDIWSCG 355 (501)
T ss_pred CCCceecCccccc-----------------------------------ccccccCCcCCCCchhhcCCCCCcHHHHHHHH
Confidence 9999866422110 01134589999999999999999999999999
Q ss_pred HHHHHHHhCCcc-hhccccCCCCcch--------------hchhHHHHHHHHhhhc-CccchH------HHHHHHHHHHh
Q 003847 700 VILLELLTGKVI-VVDELGQGNGLLV--------------EDKNRAIRLADAAIRA-DFEGKE------EALLSCFKLGY 757 (791)
Q Consensus 700 vil~elltG~~p-f~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~-~~~~~~------~~~~~l~~li~ 757 (791)
|++|||++|+.+ |............ .........++..... ...... .....+.+++.
T Consensus 356 vil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 435 (501)
T PHA03210 356 LILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLV 435 (501)
T ss_pred HHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHH
Confidence 999999999864 4322111000000 0000011111100000 000000 01235677899
Q ss_pred hccCCCCCCCCCHHHHHHH
Q 003847 758 SCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 758 ~cl~~dP~~RPs~~evl~~ 776 (791)
+||+.||++|||+.|+++.
T Consensus 436 kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 436 KMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HHhccCcccCcCHHHHhhC
Confidence 9999999999999999864
No 315
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.6e-34 Score=306.77 Aligned_cols=248 Identities=23% Similarity=0.307 Sum_probs=189.0
Q ss_pred eeccccCceEEEEEEe-CCCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccC-CCCccceeeEEEccCceEEEEeccCCCC
Q 003847 481 YILGASGSSIMYKAVL-EDGTALAVRRIGENS-VDRFRDFETQVRVIAKLV-HPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
..||+|+||.||++.. .+++.||+|.+.... ......+.+|+.++.++. |+||+++++++..++..+++|||+. ++
T Consensus 10 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~-~~ 88 (288)
T cd06616 10 GEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMD-IS 88 (288)
T ss_pred HHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEeccc-CC
Confidence 5799999999999994 468999999987542 334567889999999996 9999999999999999999999985 46
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE-KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+.++...........+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.......
T Consensus 89 l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~----- 163 (288)
T cd06616 89 LDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIA----- 163 (288)
T ss_pred HHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCc-----
Confidence 5554322111111248999999999999999999997 5999999999999999999999999999876532111
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC---CCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI---KPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~---~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
.....|+..|+|||++.+. .++.++|||||||++|||++|+.||.
T Consensus 164 --------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 211 (288)
T cd06616 164 --------------------------------KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYP 211 (288)
T ss_pred --------------------------------cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCch
Confidence 0122378889999999765 68999999999999999999999986
Q ss_pred ccccCCCCcchhchhHHHHHHH---HhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 714 DELGQGNGLLVEDKNRAIRLAD---AAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
.... . .....+... +.+.. ......+..+.+|+.+||+.+|++|||+++|++.
T Consensus 212 ~~~~-----~---~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 212 KWNS-----V---FDQLTQVVKGDPPILSN--SEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred hcch-----H---HHHHhhhcCCCCCcCCC--cCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 4310 0 000111110 01111 1111245678999999999999999999999874
No 316
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=2.9e-34 Score=299.97 Aligned_cols=243 Identities=19% Similarity=0.228 Sum_probs=187.7
Q ss_pred eccccCceEEEEEEe-CCCcEEEEEEcCCCch---hhHHHHHHHHHHH-hccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 482 ILGASGSSIMYKAVL-EDGTALAVRRIGENSV---DRFRDFETQVRVI-AKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~---~~~~~~~~E~~~l-~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
.||+|+||.||+|.. .+++.||||.+..... .....+..|..++ ...+|+||+++++++...+..|+|+||++++
T Consensus 3 ~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 82 (260)
T cd05611 3 PISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGG 82 (260)
T ss_pred cCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCCC
Confidence 589999999999985 4689999999875432 2223445555544 4558999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++.... .+++..+..++.|++.||.|||+.+++||||+|+||+++.++.+||+|||+++.....
T Consensus 83 ~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~------- 150 (260)
T cd05611 83 DCASLIKTLG-----GLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLEN------- 150 (260)
T ss_pred CHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceecccc-------
Confidence 9999887643 3899999999999999999999999999999999999999999999999998753210
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
....|+..|+|||.+.+..++.++||||||+++|||++|..||....
T Consensus 151 ---------------------------------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 197 (260)
T cd05611 151 ---------------------------------KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAET 197 (260)
T ss_pred ---------------------------------ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCC
Confidence 01237778999999988888999999999999999999999985431
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhc
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALE 778 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 778 (791)
.. ........................+.+++.+||+.+|++||++.++.+.|+
T Consensus 198 ~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~ 250 (260)
T cd05611 198 PD---------AVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKS 250 (260)
T ss_pred HH---------HHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence 10 000111110100000111124567899999999999999998876666554
No 317
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1.4e-34 Score=302.06 Aligned_cols=244 Identities=22% Similarity=0.235 Sum_probs=197.0
Q ss_pred cceeccccCceEEEEEEeC-CCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccC
Q 003847 479 SAYILGASGSSIMYKAVLE-DGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
..+.||.|+||.||++... +++.||+|.+.... ....+.+.+|++++++++||||+++++++.+.+..++|+||++
T Consensus 4 ~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 83 (258)
T cd05578 4 LLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLL 83 (258)
T ss_pred EEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCC
Confidence 3568999999999999964 68999999997542 2345788999999999999999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
+++|.+++.... ++++..+..++.|+++||+|||+.+++|+||||+||++++++.++|+|||++........
T Consensus 84 ~~~L~~~l~~~~-----~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~--- 155 (258)
T cd05578 84 GGDLRYHLSQKV-----KFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTL--- 155 (258)
T ss_pred CCCHHHHHHhcC-----CcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCcc---
Confidence 999999887652 389999999999999999999999999999999999999999999999999876542210
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
.....|+..|+|||.+.+..++.++|+||||+++|+|++|+.||..
T Consensus 156 ----------------------------------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 201 (258)
T cd05578 156 ----------------------------------TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRG 201 (258)
T ss_pred ----------------------------------ccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCC
Confidence 0122377889999999888899999999999999999999999865
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCH--HHHH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSM--KEAL 774 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~--~evl 774 (791)
..... .......... .....+...+..+.+++.+||..||.+||++ +|++
T Consensus 202 ~~~~~-------~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 202 HSRTI-------RDQIRAKQET---ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred CCccH-------HHHHHHHhcc---ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 43210 0011111110 1112222355788999999999999999999 5554
No 318
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=6.3e-34 Score=295.18 Aligned_cols=246 Identities=24% Similarity=0.367 Sum_probs=200.1
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
.+.||+|++|.||++... +++.+++|++........+.+.+|++++++++|+||+++++++...+..++++||+++++|
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L 84 (253)
T cd05122 5 LEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSL 84 (253)
T ss_pred eeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcH
Confidence 468999999999999964 6899999999876555667899999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++..... .+++..+..++.|++.||+|||+.|++||||+|+||+++.++.++|+|||.+........
T Consensus 85 ~~~~~~~~~----~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~------- 153 (253)
T cd05122 85 KDLLKSTNQ----TLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA------- 153 (253)
T ss_pred HHHHhhcCC----CCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccc-------
Confidence 998876531 389999999999999999999999999999999999999999999999999876643211
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccccC
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQ 718 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~ 718 (791)
.....|+..|+|||.+.+..++.++||||||+++|+|++|+.||.....
T Consensus 154 ------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~- 202 (253)
T cd05122 154 ------------------------------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPP- 202 (253)
T ss_pred ------------------------------ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCch-
Confidence 1123478889999999888899999999999999999999999854311
Q ss_pred CCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 719 GNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
....... .................+.+++.+||+.||++|||+.|+++.
T Consensus 203 --------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 203 --------MKALFKI-ATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred --------HHHHHHH-HhcCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0011111 111111111111125678999999999999999999999863
No 319
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=3e-34 Score=299.18 Aligned_cols=246 Identities=22% Similarity=0.300 Sum_probs=195.2
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc--hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
.+.||+|+||.||++.. .+|..||+|.+.... ....+.+.+|++++++++|+||+++++.+...+..++|+||++++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (257)
T cd08225 5 IKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGG 84 (257)
T ss_pred EEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCC
Confidence 46899999999999995 468999999986532 233467889999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCC-CeEEeccCcccccCCCCCCCcC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDM-EPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~-~~kL~DFGla~~~~~~~~~~~~ 635 (791)
+|.+++...... .+++..+..++.|++.||+|||+.+++|+||||+||++++++ .+||+|||.+.........
T Consensus 85 ~L~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~--- 158 (257)
T cd08225 85 DLMKRINRQRGV---LFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMEL--- 158 (257)
T ss_pred cHHHHHHhccCC---CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCccc---
Confidence 999988764322 379999999999999999999999999999999999999875 4699999998765422110
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
.....|++.|+|||+..+..++.++||||||+++|||++|+.||...
T Consensus 159 ---------------------------------~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 205 (257)
T cd08225 159 ---------------------------------AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGN 205 (257)
T ss_pred ---------------------------------ccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 11234788899999998888999999999999999999999998542
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
.. .............. ........+.+++.+|+..+|++|||+.|+++.
T Consensus 206 ~~---------~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 206 NL---------HQLVLKICQGYFAP---ISPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred cH---------HHHHHHHhcccCCC---CCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 10 00111111111111 111234578899999999999999999999864
No 320
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2.5e-34 Score=304.94 Aligned_cols=255 Identities=20% Similarity=0.299 Sum_probs=191.8
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCc--hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
.+.||+|+||.||+|..+ +++.||+|++.... ....+.+.+|++++++++||||+++++++..++..++||||++++
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 85 (286)
T cd07846 6 LGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHT 85 (286)
T ss_pred eeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCcc
Confidence 468999999999999965 58999999986532 223457889999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.++..... .+++..++.++.|++.||+|||+.+++||||+|+||++++++.++|+|||++..+.....
T Consensus 86 ~l~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~----- 155 (286)
T cd07846 86 VLDDLEKYPN-----GLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE----- 155 (286)
T ss_pred HHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcc-----
Confidence 8887655432 389999999999999999999999999999999999999999999999999876532211
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
......|+..|+|||++.+ ..++.++||||||+++|||++|+.||...
T Consensus 156 -------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~ 204 (286)
T cd07846 156 -------------------------------VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGD 204 (286)
T ss_pred -------------------------------ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCC
Confidence 0112347888999999875 45788999999999999999999888543
Q ss_pred ccCC--------CCcchhchhHHH---HHHHHhhhcCcc-------chHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 716 LGQG--------NGLLVEDKNRAI---RLADAAIRADFE-------GKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 716 ~~~~--------~~~~~~~~~~~~---~~~~~~~~~~~~-------~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
.... ............ .+.+........ ........+.+++.+||+.+|++||++.++++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 205 SDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred chHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 2100 000000000000 000000000000 00113467889999999999999999999875
No 321
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=7.2e-34 Score=307.69 Aligned_cols=263 Identities=21% Similarity=0.252 Sum_probs=191.3
Q ss_pred ecccc--CceEEEEEEe-CCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 482 ILGAS--GSSIMYKAVL-EDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 482 ~lG~G--~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
.||+| +||+||++.. .+|+.||+|++... .....+.+++|+.+++.++||||+++++++..++..++|+||+.++
T Consensus 5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~ 84 (328)
T cd08226 5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG 84 (328)
T ss_pred HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence 45666 8999999995 57999999998753 2334577899999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++...... .+++..+..++.|++.||+|||+.||+||||||+||+++.++.+|++||+.+............
T Consensus 85 ~l~~~l~~~~~~---~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~- 160 (328)
T cd08226 85 SANSLLKTYFPE---GMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV- 160 (328)
T ss_pred CHHHHHHhhccc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc-
Confidence 999988765432 3899999999999999999999999999999999999999999999999876543221110000
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC--CCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS--IKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~--~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
.........++..|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 161 ----------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~ 212 (328)
T cd08226 161 ----------------------------VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQD 212 (328)
T ss_pred ----------------------------cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 0000011225667999999976 3478999999999999999999999864
Q ss_pred cccCCCC--------------cchhchhHHH-----H----HHHHhhh-----------cCccchHHHHHHHHHHHhhcc
Q 003847 715 ELGQGNG--------------LLVEDKNRAI-----R----LADAAIR-----------ADFEGKEEALLSCFKLGYSCA 760 (791)
Q Consensus 715 ~~~~~~~--------------~~~~~~~~~~-----~----~~~~~~~-----------~~~~~~~~~~~~l~~li~~cl 760 (791)
....... .......... . +.+.... ...+........+.+|+.+||
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 292 (328)
T cd08226 213 MLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCL 292 (328)
T ss_pred cChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHc
Confidence 3210000 0000000000 0 0000000 001112235567899999999
Q ss_pred CCCCCCCCCHHHHHHH
Q 003847 761 SPLPQKRPSMKEALQA 776 (791)
Q Consensus 761 ~~dP~~RPs~~evl~~ 776 (791)
..||++|||++|+++.
T Consensus 293 ~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 293 QQDPEKRPSASSLLSH 308 (328)
T ss_pred cCCcccCCCHHHHhhC
Confidence 9999999999999853
No 322
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-35 Score=321.29 Aligned_cols=196 Identities=27% Similarity=0.380 Sum_probs=168.4
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccC------ceEEEEe
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVD------EKLIIYD 551 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~~~lv~e 551 (791)
.+.||+|+||.||+++ .++|+.||||.+.... ....+..-+|+++|++++|+|||+++++-++.. ...+|||
T Consensus 18 ~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmE 97 (732)
T KOG4250|consen 18 DERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVME 97 (732)
T ss_pred hhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEe
Confidence 3589999999999999 6789999999998753 333466789999999999999999999865544 4589999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEec--CCC--CeEEeccCcccccC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLG--NDM--EPKIGDFGLERLVT 627 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~--~~~--~~kL~DFGla~~~~ 627 (791)
||.+|+|...+..-.+.. .+++.+.+.++.+++.||.|||++|||||||||.||++- ++| ..||+|||.|+.+.
T Consensus 98 yC~gGsL~~~L~~PEN~~--GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~ 175 (732)
T KOG4250|consen 98 YCSGGSLRKVLNSPENAY--GLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELD 175 (732)
T ss_pred ecCCCcHHHHhcCccccc--CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCC
Confidence 999999999987654433 499999999999999999999999999999999999983 334 36999999999876
Q ss_pred CCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc-CCCCCCchhhHHHHHHHHHHH
Q 003847 628 GDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR-SIKPNPKWDVYSFGVILLELL 706 (791)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~-~~~~~~~sDvwSlGvil~ell 706 (791)
++. ...+++||..|.+||.+. .+.|+..+|.|||||++||.+
T Consensus 176 d~s-------------------------------------~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~ca 218 (732)
T KOG4250|consen 176 DNS-------------------------------------LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECA 218 (732)
T ss_pred CCC-------------------------------------eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHh
Confidence 433 234567999999999998 488999999999999999999
Q ss_pred hCCcchhc
Q 003847 707 TGKVIVVD 714 (791)
Q Consensus 707 tG~~pf~~ 714 (791)
||..||..
T Consensus 219 TG~lPF~p 226 (732)
T KOG4250|consen 219 TGELPFIP 226 (732)
T ss_pred ccCCCCCc
Confidence 99999854
No 323
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=5.9e-34 Score=303.32 Aligned_cols=259 Identities=13% Similarity=0.118 Sum_probs=181.4
Q ss_pred ceeccccCceEEEEEEeCC----CcEEEEEEcCCCchhhH-----------HHHHHHHHHHhccCCCCccceeeEEEccC
Q 003847 480 AYILGASGSSIMYKAVLED----GTALAVRRIGENSVDRF-----------RDFETQVRVIAKLVHPNLVRIRGFYWGVD 544 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~----g~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~H~nIv~l~~~~~~~~ 544 (791)
.++||+|+||.||+|...+ +..+|+|+......... .....+...+..++|+||+++++++....
T Consensus 17 ~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~ 96 (294)
T PHA02882 17 DKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCGSFKR 96 (294)
T ss_pred eeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEeeeEec
Confidence 4689999999999999543 45667776433221110 11223344556778999999999766543
Q ss_pred ----ceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEecc
Q 003847 545 ----EKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDF 620 (791)
Q Consensus 545 ----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DF 620 (791)
..++++|++. .++.+.+.... ..++..+..|+.|++.||+|||+.+|+||||||+|||++.++.+||+||
T Consensus 97 ~~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DF 170 (294)
T PHA02882 97 CRMYYRFILLEKLV-ENTKEIFKRIK-----CKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDY 170 (294)
T ss_pred CCceEEEEEEehhc-cCHHHHHHhhc-----cCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEc
Confidence 3467888874 46666655432 2678889999999999999999999999999999999999999999999
Q ss_pred CcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHH
Q 003847 621 GLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGV 700 (791)
Q Consensus 621 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGv 700 (791)
|+++........... .........||+.|+|||+..+..++.++|||||||
T Consensus 171 Gla~~~~~~~~~~~~-----------------------------~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~ 221 (294)
T PHA02882 171 GIASHFIIHGKHIEY-----------------------------SKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGY 221 (294)
T ss_pred CCceeeccCCccccc-----------------------------ccccccccCCCccccCHHHhCCCCCCcHHHHHHHHH
Confidence 999876432111000 001112345999999999999999999999999999
Q ss_pred HHHHHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhc
Q 003847 701 ILLELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALE 778 (791)
Q Consensus 701 il~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~ 778 (791)
++|||++|+.||........ .+... ..++......+.... ...+..+.+++..|+..+|++||++.++++.|+
T Consensus 222 ~l~el~~g~~P~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 222 CMLKWAGIKLPWKGFGHNGN--LIHAA--KCDFIKRLHEGKIKI-KNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HHHHHHhCCCCCCccccchH--HHHHh--HHHHHHHhhhhhhcc-CCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 99999999999965422111 00000 011111111111111 113467889999999999999999999998774
No 324
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-35 Score=312.70 Aligned_cols=249 Identities=24% Similarity=0.363 Sum_probs=201.6
Q ss_pred ceeccccCceEEEEEEeC--CC--cEEEEEEcCCCchh-hHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccC
Q 003847 480 AYILGASGSSIMYKAVLE--DG--TALAVRRIGENSVD-RFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~--~g--~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
.++||+|.||+|++|.+. +| ..||||.++.+... ...+|.+|+.+|.+|+|+|+++|||+..+ ....+|||+++
T Consensus 115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELap 193 (1039)
T KOG0199|consen 115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAP 193 (1039)
T ss_pred HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhcc
Confidence 358999999999999964 23 57999999876544 67899999999999999999999999887 67889999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
.|+|.+.++... +. .|.......++.|||.|+.||.++++|||||-..|+|+-....+||+|||+.+-+...+....
T Consensus 194 lGSLldrLrka~-~~--~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yv 270 (1039)
T KOG0199|consen 194 LGSLLDRLRKAK-KA--ILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYV 270 (1039)
T ss_pred cchHHHHHhhcc-cc--ceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCCcceE
Confidence 999999998732 22 488889999999999999999999999999999999999888999999999998876554322
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhC-Ccchh
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTG-KVIVV 713 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG-~~pf~ 713 (791)
.... ..-...|.|||.++...++.++|||+|||++|||+|+ ..||.
T Consensus 271 m~p~---------------------------------rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~ 317 (1039)
T KOG0199|consen 271 MAPQ---------------------------------RKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWV 317 (1039)
T ss_pred ecCC---------------------------------CcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCC
Confidence 1111 0123459999999999999999999999999999994 45876
Q ss_pred ccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHh
Q 003847 714 DELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQAL 777 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 777 (791)
+-.+. .+.+.+|. ....+.++.++.++++++..||..+|++|||+..|.+.+
T Consensus 318 G~~g~----------qIL~~iD~--~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 318 GCRGI----------QILKNIDA--GERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred CCCHH----------HHHHhccc--cccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 54221 12222331 122344455788999999999999999999999997543
No 325
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=5.8e-34 Score=303.63 Aligned_cols=260 Identities=19% Similarity=0.191 Sum_probs=189.6
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCc--hhhHHHHHHHHHHHhccC-CCCccceeeEEEccCc-----eEEE
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENS--VDRFRDFETQVRVIAKLV-HPNLVRIRGFYWGVDE-----KLII 549 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~-----~~lv 549 (791)
....||+|+||.||+|.. .+++.||||++.... ......+.+|+.++++++ |+||+++++++...+. .|+|
T Consensus 5 ~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv 84 (295)
T cd07837 5 KLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLV 84 (295)
T ss_pred EeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEE
Confidence 346899999999999995 468999999986542 223357888999999995 6999999999987666 7999
Q ss_pred EeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecC-CCCeEEeccCcccccCC
Q 003847 550 YDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN-DMEPKIGDFGLERLVTG 628 (791)
Q Consensus 550 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~-~~~~kL~DFGla~~~~~ 628 (791)
|||+++ +|.+++..........+++..++.++.||+.||+|||+.+|+||||||+||+++. ++.+||+|||+++....
T Consensus 85 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~ 163 (295)
T cd07837 85 FEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSI 163 (295)
T ss_pred eeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccceecCC
Confidence 999975 8988887654322235899999999999999999999999999999999999998 88999999999875532
Q ss_pred CCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHh
Q 003847 629 DTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLT 707 (791)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~ellt 707 (791)
... ......+++.|+|||++.+ ..++.++||||||+++|||++
T Consensus 164 ~~~------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~ 207 (295)
T cd07837 164 PVK------------------------------------SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSR 207 (295)
T ss_pred Ccc------------------------------------ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHc
Confidence 110 0111236778999998865 457899999999999999999
Q ss_pred CCcchhccccCCCCc-chh-----chh---HHHHHHHHhhhcCcc------chHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 003847 708 GKVIVVDELGQGNGL-LVE-----DKN---RAIRLADAAIRADFE------GKEEALLSCFKLGYSCASPLPQKRPSMKE 772 (791)
Q Consensus 708 G~~pf~~~~~~~~~~-~~~-----~~~---~~~~~~~~~~~~~~~------~~~~~~~~l~~li~~cl~~dP~~RPs~~e 772 (791)
|+.||.......... ... ... ......+........ ........+.++|.+||..||.+||+++|
T Consensus 208 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~e 287 (295)
T cd07837 208 KQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKA 287 (295)
T ss_pred CCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHH
Confidence 999986432100000 000 000 000000000000000 00123466889999999999999999999
Q ss_pred HHH
Q 003847 773 ALQ 775 (791)
Q Consensus 773 vl~ 775 (791)
++.
T Consensus 288 il~ 290 (295)
T cd07837 288 ALT 290 (295)
T ss_pred Hhc
Confidence 975
No 326
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=5.2e-34 Score=303.40 Aligned_cols=253 Identities=20% Similarity=0.219 Sum_probs=187.2
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchh-hHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVD-RFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
.+.||+|+||.||+|.. .+|+.||+|++...... ....+.+|++++++++|+||+++++++...+..++||||+. ++
T Consensus 10 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-~~ 88 (291)
T cd07870 10 LEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-TD 88 (291)
T ss_pred EEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc-CC
Confidence 35799999999999984 56899999998654322 23467789999999999999999999999999999999995 67
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++..... .+++..+..++.|++.||+|||+.+|+|+||||+||+++.++.+||+|||+++.......
T Consensus 89 l~~~~~~~~~----~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~------ 158 (291)
T cd07870 89 LAQYMIQHPG----GLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQ------ 158 (291)
T ss_pred HHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCC------
Confidence 7776654322 378888999999999999999999999999999999999999999999999875432110
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
......++..|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 159 ------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~ 208 (291)
T cd07870 159 ------------------------------TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVS 208 (291)
T ss_pred ------------------------------CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCch
Confidence 0112236788999999875 357889999999999999999999986432
Q ss_pred cCCCCcchhchhH---------------HHHHHHHhhhcCccc-------hHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 003847 717 GQGNGLLVEDKNR---------------AIRLADAAIRADFEG-------KEEALLSCFKLGYSCASPLPQKRPSMKEAL 774 (791)
Q Consensus 717 ~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~-------~~~~~~~l~~li~~cl~~dP~~RPs~~evl 774 (791)
.. ...+.+... ............... .......+.+++.+|+..||++|||++|++
T Consensus 209 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l 286 (291)
T cd07870 209 DV--FEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDAL 286 (291)
T ss_pred hH--HHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHh
Confidence 10 000000000 000000000000000 001235678899999999999999999987
Q ss_pred H
Q 003847 775 Q 775 (791)
Q Consensus 775 ~ 775 (791)
.
T Consensus 287 ~ 287 (291)
T cd07870 287 L 287 (291)
T ss_pred c
Confidence 5
No 327
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=6.7e-35 Score=286.32 Aligned_cols=263 Identities=21% Similarity=0.257 Sum_probs=194.2
Q ss_pred ceeccccCceEEEEEEeCC-----CcEEEEEEcCCCch--hhHHHHHHHHHHHhccCCCCccceeeEEEc-cCceEEEEe
Q 003847 480 AYILGASGSSIMYKAVLED-----GTALAVRRIGENSV--DRFRDFETQVRVIAKLVHPNLVRIRGFYWG-VDEKLIIYD 551 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~-----g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-~~~~~lv~e 551 (791)
...||+|.||.||+|...+ ...+|+|+++.... .......+|+.+++.++||||+.+..+|.. +...++++|
T Consensus 29 ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fd 108 (438)
T KOG0666|consen 29 IGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWLLFD 108 (438)
T ss_pred cceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEeh
Confidence 3469999999999996322 24799999976421 123457889999999999999999999887 778899999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCC----CCeEEeccCcccccC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGND----MEPKIGDFGLERLVT 627 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~----~~~kL~DFGla~~~~ 627 (791)
|.+. +|.+.++.........++...++.|+.||+.|+.|||++=|+||||||.|||+..+ |.|||+|||+++.+.
T Consensus 109 YAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~ 187 (438)
T KOG0666|consen 109 YAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFN 187 (438)
T ss_pred hhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhh
Confidence 9975 89998887665554579999999999999999999999999999999999999877 999999999999886
Q ss_pred CCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHH
Q 003847 628 GDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELL 706 (791)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~ell 706 (791)
....... .....+-|.-|+|||.+.+ ..||++.||||+|||+.||+
T Consensus 188 ~plkpl~---------------------------------s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElL 234 (438)
T KOG0666|consen 188 NPLKPLA---------------------------------SLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELL 234 (438)
T ss_pred ccccccc---------------------------------cCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHH
Confidence 4432111 1223457888999999987 56899999999999999999
Q ss_pred hCCcchhccccCCCCc---chhchhHHHHHH---------------------HHhhhcCccc---------hHHHHHHHH
Q 003847 707 TGKVIVVDELGQGNGL---LVEDKNRAIRLA---------------------DAAIRADFEG---------KEEALLSCF 753 (791)
Q Consensus 707 tG~~pf~~~~~~~~~~---~~~~~~~~~~~~---------------------~~~~~~~~~~---------~~~~~~~l~ 753 (791)
|-++.|.......... ......++.++. .......+.. .........
T Consensus 235 tl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~ 314 (438)
T KOG0666|consen 235 TLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSAL 314 (438)
T ss_pred ccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHH
Confidence 9998876533211111 011111111110 0000000000 000112367
Q ss_pred HHHhhccCCCCCCCCCHHHHHHH
Q 003847 754 KLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 754 ~li~~cl~~dP~~RPs~~evl~~ 776 (791)
+|+.++|..||.+|.|+++.++.
T Consensus 315 ~LL~klL~yDP~kRIta~qAleh 337 (438)
T KOG0666|consen 315 DLLQKLLTYDPIKRITAEQALEH 337 (438)
T ss_pred HHHHHHhccCchhhccHHHHhcc
Confidence 89999999999999999999875
No 328
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-36 Score=288.52 Aligned_cols=256 Identities=21% Similarity=0.286 Sum_probs=194.4
Q ss_pred ccchHHHhhhcceeccccCceEEEEEE-eCCCcEEEEEEcCCCch-hhHHHHHHHHHHHhcc-CCCCccceeeEEEccCc
Q 003847 469 ELELETLLKASAYILGASGSSIMYKAV-LEDGTALAVRRIGENSV-DRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDE 545 (791)
Q Consensus 469 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 545 (791)
.|+-+++.. ...||.|+||+|+|.. .+.|+.+|||++..... ...+++..|.+...+- +.||||++||.+..++.
T Consensus 60 ~F~~~~Lqd--lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGd 137 (361)
T KOG1006|consen 60 TFTSDNLQD--LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGD 137 (361)
T ss_pred ccccchHHH--HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCc
Confidence 344444433 3469999999999998 45799999999987644 4567788888865554 79999999999999999
Q ss_pred eEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCeecCCCCCCeEecCCCCeEEeccCccc
Q 003847 546 KLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE-KKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624 (791)
Q Consensus 546 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~ivHrDlkp~NILl~~~~~~kL~DFGla~ 624 (791)
.|+.||+| ..+|..+-..........+++...-.|..-.+.||+||-+ ..||||||||+|||+|..|.+||||||++.
T Consensus 138 cWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcG 216 (361)
T KOG1006|consen 138 CWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICG 216 (361)
T ss_pred eeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchH
Confidence 99999999 4576554332211112248999999999999999999997 799999999999999999999999999998
Q ss_pred ccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc--CCCCCCchhhHHHHHHH
Q 003847 625 LVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR--SIKPNPKWDVYSFGVIL 702 (791)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~--~~~~~~~sDvwSlGvil 702 (791)
.+..... .+...|...|||||.+. +..|+-++||||||++|
T Consensus 217 qLv~SiA-------------------------------------kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL 259 (361)
T KOG1006|consen 217 QLVDSIA-------------------------------------KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITL 259 (361)
T ss_pred hHHHHHH-------------------------------------hhhccCCccccChhccCCccCCcchhhhhhhhcceE
Confidence 7653321 22334788899999995 34589999999999999
Q ss_pred HHHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCcc---ch---HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 703 LELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFE---GK---EEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 703 ~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
||+.||+.||..- . ...+-+.....++.+ .. .+....+.+++..|+.+|-..||...++++.
T Consensus 260 ~EvAtG~fPyr~w----~--------svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 260 YEVATGNFPYRKW----D--------SVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred eeeecCCCCcchH----H--------HHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 9999999998542 1 111111111222211 11 2256788999999999999999999998764
No 329
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=9.2e-34 Score=297.47 Aligned_cols=234 Identities=17% Similarity=0.212 Sum_probs=183.5
Q ss_pred ccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEeccCCCChhH
Q 003847 483 LGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN 560 (791)
Q Consensus 483 lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~ 560 (791)
||+|+||.||++.. .+++.+|+|.+....... . |+.....+ +|+||+++++++...+..++||||+++++|.+
T Consensus 24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~---~--e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~ 98 (267)
T PHA03390 24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA---I--EPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFD 98 (267)
T ss_pred ecCCCceEEEEEEEcCCCcEEEEEEEehhhcch---h--hHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHH
Confidence 79999999999994 578999999986542221 1 22222222 79999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCC-CeEEeccCcccccCCCCCCCcCCCCc
Q 003847 561 ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDM-EPKIGDFGLERLVTGDTSSSKAGGSA 639 (791)
Q Consensus 561 ~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~-~~kL~DFGla~~~~~~~~~~~~~~~~ 639 (791)
++.... .+++.++..++.|+++||+|||+.|++||||||+||+++.++ .++|+|||+++......
T Consensus 99 ~l~~~~-----~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~--------- 164 (267)
T PHA03390 99 LLKKEG-----KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPS--------- 164 (267)
T ss_pred HHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCCc---------
Confidence 987653 389999999999999999999999999999999999999988 99999999987653211
Q ss_pred cccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccccCC
Q 003847 640 RNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQG 719 (791)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~ 719 (791)
...|+..|+|||++.+..++.++||||+|+++|||++|+.||.......
T Consensus 165 -------------------------------~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~ 213 (267)
T PHA03390 165 -------------------------------CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE 213 (267)
T ss_pred -------------------------------cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch
Confidence 1237888999999998889999999999999999999999996432211
Q ss_pred CCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCC-HHHHHH
Q 003847 720 NGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPS-MKEALQ 775 (791)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~ 775 (791)
.. ...+.. ...............+.+++.+||+.+|.+||+ ++|+++
T Consensus 214 ~~--------~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 214 LD--------LESLLK-RQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred hh--------HHHHHH-hhcccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 00 011111 111111222235678899999999999999996 588874
No 330
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.3e-33 Score=293.47 Aligned_cols=243 Identities=24% Similarity=0.352 Sum_probs=198.2
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCch--hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENSV--DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
...||+|++|.||++... +++.||+|.+..... ...+.+.+|++++++++|+|++++++++.+.+..++||||++++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 84 (254)
T cd06627 5 GDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENG 84 (254)
T ss_pred eeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCCC
Confidence 468999999999999854 688999999977643 45578999999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++.... .+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++.........
T Consensus 85 ~L~~~~~~~~-----~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~---- 155 (254)
T cd06627 85 SLRQIIKKFG-----PFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD---- 155 (254)
T ss_pred cHHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccc----
Confidence 9999887652 3899999999999999999999999999999999999999999999999999876532210
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
.....|+..|+|||...+..++.++||||+|+++|+|++|+.||....
T Consensus 156 --------------------------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~ 203 (254)
T cd06627 156 --------------------------------DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLN 203 (254)
T ss_pred --------------------------------ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCcc
Confidence 112347888999999988888999999999999999999999985431
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
. ........ ..............+.+++.+||..+|++||++.|++.
T Consensus 204 ~---------~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 204 P---------MAALFRIV---QDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred H---------HHHHHHHh---ccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 1 01111111 11111112224567889999999999999999999985
No 331
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.2e-33 Score=300.96 Aligned_cols=254 Identities=23% Similarity=0.248 Sum_probs=189.7
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCch--hhHHHHHHHHHHHhccCCCCccceeeEEEcc--CceEEEEeccC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENSV--DRFRDFETQVRVIAKLVHPNLVRIRGFYWGV--DEKLIIYDFVP 554 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv~e~~~ 554 (791)
.+.||.|+||.||+|... +++.||+|.++.... .....+.+|+.++++++||||+++++++... +..|+||||++
T Consensus 10 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~ 89 (293)
T cd07843 10 LNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVE 89 (293)
T ss_pred hhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcC
Confidence 468999999999999964 689999999965422 2234567899999999999999999998877 88999999996
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
++|.+++..... .+++..++.++.|++.||+|||+.+++|+||||+||+++.++.+||+|||++........
T Consensus 90 -~~L~~~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~--- 161 (293)
T cd07843 90 -HDLKSLMETMKQ----PFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLK--- 161 (293)
T ss_pred -cCHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCcc---
Confidence 599888776432 389999999999999999999999999999999999999999999999999886543210
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC-CCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI-KPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
......+++.|+|||.+.+. .++.++|+||||+++|||++|+.||.
T Consensus 162 ---------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~ 208 (293)
T cd07843 162 ---------------------------------PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFP 208 (293)
T ss_pred ---------------------------------ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCC
Confidence 01122367889999998764 46899999999999999999999986
Q ss_pred ccccCCCCcch--------hchhHHH-H-----------HHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 003847 714 DELGQGNGLLV--------EDKNRAI-R-----------LADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEA 773 (791)
Q Consensus 714 ~~~~~~~~~~~--------~~~~~~~-~-----------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 773 (791)
..........+ ...+... . .....+...++.. .....+.+++.+||+.||++|||+.|+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~~p~~R~t~~el 287 (293)
T cd07843 209 GKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPAL-SLSDNGFDLLNRLLTYDPAKRISAEDA 287 (293)
T ss_pred CCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhcccccc-CCChHHHHHHHHHhccCccccCCHHHH
Confidence 43211000000 0000000 0 0000000111100 024567899999999999999999999
Q ss_pred HH
Q 003847 774 LQ 775 (791)
Q Consensus 774 l~ 775 (791)
++
T Consensus 288 l~ 289 (293)
T cd07843 288 LK 289 (293)
T ss_pred hc
Confidence 85
No 332
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=6.5e-34 Score=301.98 Aligned_cols=255 Identities=20% Similarity=0.295 Sum_probs=192.4
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
...||+|++|.||+|... +++.||||+++.. .....+.+.+|++++++++|+||+++++++...+..++||||++++
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~ 85 (288)
T cd07833 6 LGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERT 85 (288)
T ss_pred EEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCCC
Confidence 468999999999999954 6889999998653 2333467899999999999999999999999999999999999987
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
.+..+..... .+++..+..++.||+.||+|||+.+++||||+|+||++++++.+||+|||++.........
T Consensus 86 ~l~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~---- 156 (288)
T cd07833 86 LLELLEASPG-----GLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPAS---- 156 (288)
T ss_pred HHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccc----
Confidence 7765543322 3899999999999999999999999999999999999999999999999998876432210
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC-CCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI-KPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
......++..|+|||++.+. .++.++||||||+++|+|++|+.||...
T Consensus 157 -------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~ 205 (288)
T cd07833 157 -------------------------------PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGD 205 (288)
T ss_pred -------------------------------cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 11123478889999999887 7899999999999999999999988643
Q ss_pred ccCCCCc--------chhchhHHHHHHHHhhhc----Cc--------cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 716 LGQGNGL--------LVEDKNRAIRLADAAIRA----DF--------EGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 716 ~~~~~~~--------~~~~~~~~~~~~~~~~~~----~~--------~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
....... ......... ..+....+ .. .........+.+++.+||..+|++||+++++++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 206 SDIDQLYLIQKCLGPLPPSHQELF-SSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred CHHHHHHHHHHHhCCCCHHHhhhc-ccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 1100000 000000000 00000000 00 000112567899999999999999999999975
No 333
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1.8e-33 Score=297.70 Aligned_cols=254 Identities=17% Similarity=0.216 Sum_probs=186.9
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccC-CCCccceeeEEEcc--CceEEEEeccC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS-VDRFRDFETQVRVIAKLV-HPNLVRIRGFYWGV--DEKLIIYDFVP 554 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~--~~~~lv~e~~~ 554 (791)
...||+|+||.||+|.. .+++.||+|+++... ........+|+.+++++. |+||+++++++.+. +..++||||++
T Consensus 4 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~ 83 (282)
T cd07831 4 LGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMD 83 (282)
T ss_pred EeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCC
Confidence 45799999999999994 568999999987642 222234457888899885 99999999999987 88999999996
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
++|.+++..... .+++.++..++.|++.||+|||+.|++||||||+||+++. +.+||+|||+++.+.....
T Consensus 84 -~~l~~~l~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~--- 154 (282)
T cd07831 84 -MNLYELIKGRKR----PLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP--- 154 (282)
T ss_pred -ccHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCCC---
Confidence 588877765432 3899999999999999999999999999999999999999 9999999999876532111
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc-CCCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR-SIKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~-~~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
.....++..|+|||.+. +..++.++|||||||++|||++|+.||.
T Consensus 155 ----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~ 200 (282)
T cd07831 155 ----------------------------------YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFP 200 (282)
T ss_pred ----------------------------------cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCC
Confidence 01223778899999764 4557899999999999999999999996
Q ss_pred ccccCCCCcch-----hchhHHHHHHHHhhhcCcc-----------chHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 714 DELGQGNGLLV-----EDKNRAIRLADAAIRADFE-----------GKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 714 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
........... .................+. .....+..+.+++.+||+.+|++||+++++++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 201 GTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred CCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 43211000000 0000000000000000000 011235788999999999999999999999863
No 334
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.6e-33 Score=295.11 Aligned_cols=247 Identities=19% Similarity=0.288 Sum_probs=192.9
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCC-----chhhHHHHHHHHHHHhccCCCCccceeeEEEcc--CceEEEE
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGEN-----SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGV--DEKLIIY 550 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv~ 550 (791)
..+.||+|+||.||+|.. .+++.||+|.+... .....+.+++|++++++++|+||+++++++.+. +..++|+
T Consensus 6 ~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~ 85 (264)
T cd06653 6 LGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFV 85 (264)
T ss_pred eeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEE
Confidence 356899999999999994 56899999987432 233456789999999999999999999998764 4578999
Q ss_pred eccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCC
Q 003847 551 DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 630 (791)
||+++++|.+++.... .+++..+..++.|++.||+|||+.|++|+||||+||+++.++.++|+|||+++......
T Consensus 86 e~~~~~~L~~~~~~~~-----~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 160 (264)
T cd06653 86 EYMPGGSIKDQLKAYG-----ALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTIC 160 (264)
T ss_pred EeCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcccccccccccc
Confidence 9999999999887543 38899999999999999999999999999999999999999999999999988653211
Q ss_pred CCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCc
Q 003847 631 SSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~ 710 (791)
.. ........|+..|+|||.+.+..++.++|+|||||++|||++|+.
T Consensus 161 ~~---------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~ 207 (264)
T cd06653 161 MS---------------------------------GTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKP 207 (264)
T ss_pred cc---------------------------------CccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCC
Confidence 00 001123448889999999998889999999999999999999999
Q ss_pred chhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 711 IVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 711 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
||.+.. ............... ..+......+.+++.+|+. +|.+||++.+++.
T Consensus 208 p~~~~~---------~~~~~~~~~~~~~~~--~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 208 PWAEYE---------AMAAIFKIATQPTKP--MLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred CCCccC---------HHHHHHHHHcCCCCC--CCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 986421 011111111111111 1123355678999999999 5799999998875
No 335
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.4e-33 Score=308.65 Aligned_cols=252 Identities=19% Similarity=0.252 Sum_probs=188.6
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccC------ceEEEE
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVD------EKLIIY 550 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~~~lv~ 550 (791)
...||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.++++++|+||+++++++.... ..|+||
T Consensus 21 ~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 100 (353)
T cd07850 21 LKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVM 100 (353)
T ss_pred EEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEE
Confidence 46899999999999994 57899999998653 2333456778999999999999999999886443 469999
Q ss_pred eccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCC
Q 003847 551 DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 630 (791)
||+. ++|.+.+... +++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++......
T Consensus 101 e~~~-~~l~~~~~~~-------l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~ 172 (353)
T cd07850 101 ELMD-ANLCQVIQMD-------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF 172 (353)
T ss_pred eccC-CCHHHHHhhc-------CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCCC
Confidence 9995 5888776532 7889999999999999999999999999999999999999999999999997653211
Q ss_pred CCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCc
Q 003847 631 SSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~ 710 (791)
. .....|+..|+|||.+.+..++.++|||||||++|+|++|+.
T Consensus 173 ~-------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~ 215 (353)
T cd07850 173 M-------------------------------------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTV 215 (353)
T ss_pred C-------------------------------------CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCC
Confidence 0 112347888999999999999999999999999999999999
Q ss_pred chhccccCCCC-cch----hchhHHHHHH----HHhhhcC----------------ccc-----hHHHHHHHHHHHhhcc
Q 003847 711 IVVDELGQGNG-LLV----EDKNRAIRLA----DAAIRAD----------------FEG-----KEEALLSCFKLGYSCA 760 (791)
Q Consensus 711 pf~~~~~~~~~-~~~----~~~~~~~~~~----~~~~~~~----------------~~~-----~~~~~~~l~~li~~cl 760 (791)
||......... ... .......... ....... ++. .......+.+++.+||
T Consensus 216 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L 295 (353)
T cd07850 216 LFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKML 295 (353)
T ss_pred CCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHc
Confidence 98543210000 000 0000000000 0000000 000 1113456789999999
Q ss_pred CCCCCCCCCHHHHHHH
Q 003847 761 SPLPQKRPSMKEALQA 776 (791)
Q Consensus 761 ~~dP~~RPs~~evl~~ 776 (791)
+.||++|||+.|+++.
T Consensus 296 ~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 296 VIDPEKRISVDDALQH 311 (353)
T ss_pred CCChhhCcCHHHHhcC
Confidence 9999999999999865
No 336
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=3e-34 Score=303.90 Aligned_cols=256 Identities=20% Similarity=0.212 Sum_probs=190.9
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc--hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
.+.||.|++|.||+|.. .+|+.||+|++.... ....+.+.+|++++++++|+||+++++++.+.+..+++|||++ +
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~-~ 82 (283)
T cd07835 4 VEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD-L 82 (283)
T ss_pred heEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-c
Confidence 45799999999999985 479999999986543 2223568889999999999999999999999999999999995 6
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++..... ..+++..+..++.|+++||+|||+.+++||||+|+||+++.++.++|+|||++.........
T Consensus 83 ~l~~~~~~~~~---~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~---- 155 (283)
T cd07835 83 DLKKYMDSSPL---TGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRT---- 155 (283)
T ss_pred CHHHHHhhCCC---CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccc----
Confidence 89998876542 23899999999999999999999999999999999999999999999999998754321100
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC-CCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI-KPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
.....++..|+|||++.+. .++.++||||||+++|||++|+.||...
T Consensus 156 --------------------------------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 203 (283)
T cd07835 156 --------------------------------YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGD 203 (283)
T ss_pred --------------------------------cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 0112367789999988664 5689999999999999999999998543
Q ss_pred ccCCC-Ccchh-------chh----HHHHHHHHhhhcCccc----hHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 716 LGQGN-GLLVE-------DKN----RAIRLADAAIRADFEG----KEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 716 ~~~~~-~~~~~-------~~~----~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
..... ....+ ... ...+............ .......+.+++.+|++.||++||+++|+++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 204 SEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred CHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 21000 00000 000 0000000000000000 0112356889999999999999999999985
No 337
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.6e-33 Score=298.41 Aligned_cols=257 Identities=21% Similarity=0.262 Sum_probs=192.2
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCch-hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSV-DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
.+.||.|++|.||+|+. .+|+.||||.+..... ...+.+.+|++++++++|+||+++++++...+..++||||+++ +
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~ 83 (284)
T cd07836 5 LEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDK-D 83 (284)
T ss_pred eeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCCc-c
Confidence 46899999999999996 4689999999876432 2345677899999999999999999999999999999999975 8
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++...... ..+++..+..++.|++.||+|||+.|++||||||+||++++++.+||+|||++........
T Consensus 84 l~~~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~------ 155 (284)
T cd07836 84 LKKYMDTHGVR--GALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN------ 155 (284)
T ss_pred HHHHHHhcCCC--CCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc------
Confidence 88887654422 2489999999999999999999999999999999999999999999999999875432110
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
......++..|+|||++.+ ..++.++|||||||++|+|++|+.||.+..
T Consensus 156 ------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~ 205 (284)
T cd07836 156 ------------------------------TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTN 205 (284)
T ss_pred ------------------------------ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 0112236788999998865 456889999999999999999999986542
Q ss_pred cCCCCcchhc------hhHHHHHHH-HhhhcCcc---------chHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 717 GQGNGLLVED------KNRAIRLAD-AAIRADFE---------GKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 717 ~~~~~~~~~~------~~~~~~~~~-~~~~~~~~---------~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
.......+.+ ......+.+ +.....++ ........+.+++.+|++.||.+||++.|+++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 206 NEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred cHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 2100000000 000000000 00000000 00113456789999999999999999999985
No 338
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=2.1e-33 Score=292.45 Aligned_cols=247 Identities=25% Similarity=0.366 Sum_probs=200.0
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCch--hhHHHHHHHHHHHhccCCCCccceeeEEEcc--CceEEEEeccC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENSV--DRFRDFETQVRVIAKLVHPNLVRIRGFYWGV--DEKLIIYDFVP 554 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv~e~~~ 554 (791)
.+.||+|++|.||+|... +++.|++|++..... ...+.+.+|++++++++|+||+++++.+... +..++|+||++
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~ 84 (260)
T cd06606 5 GELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVS 84 (260)
T ss_pred eeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecC
Confidence 468999999999999965 789999999876542 4567899999999999999999999999988 88999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
+++|.+++.... .+++..+..++.|++.||+|||+.+++|+||+|+||+++.++.++|+|||.+.........
T Consensus 85 ~~~L~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-- 157 (260)
T cd06606 85 GGSLSSLLKKFG-----KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG-- 157 (260)
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccc--
Confidence 999999987654 3899999999999999999999999999999999999999999999999998876543210
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
.......++..|+|||.+.+..++.++||||||+++|+|++|+.||..
T Consensus 158 --------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 205 (260)
T cd06606 158 --------------------------------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSE 205 (260)
T ss_pred --------------------------------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 001123478889999999888899999999999999999999999865
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
... ............... ..+......+.+++.+|++.+|++||++.|+++
T Consensus 206 ~~~--------~~~~~~~~~~~~~~~--~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 206 LGN--------PMAALYKIGSSGEPP--EIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred CCc--------hHHHHHhccccCCCc--CCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 420 000111111101111 112224678899999999999999999999986
No 339
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=9.6e-34 Score=307.77 Aligned_cols=261 Identities=20% Similarity=0.267 Sum_probs=191.1
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEccC-----ceEEEEec
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVD-----EKLIIYDF 552 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-----~~~lv~e~ 552 (791)
.+.||+|+||.||+|. ..+|+.||||.+... .......+.+|+.++++++|+||+++++++.... ..++|+||
T Consensus 10 ~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 89 (336)
T cd07849 10 LSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQEL 89 (336)
T ss_pred EEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehh
Confidence 4689999999999998 457899999998643 2233466888999999999999999999876543 47999999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCC
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 632 (791)
++ ++|.+++... .+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++.........
T Consensus 90 ~~-~~l~~~~~~~------~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~ 162 (336)
T cd07849 90 ME-TDLYKLIKTQ------HLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDH 162 (336)
T ss_pred cc-cCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccccccc
Confidence 96 5787766543 3899999999999999999999999999999999999999999999999998865432110
Q ss_pred CcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcc
Q 003847 633 SKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVI 711 (791)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~p 711 (791)
. .......||..|+|||.+.+ ..++.++||||+||++|+|++|+.|
T Consensus 163 ~---------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~ 209 (336)
T cd07849 163 T---------------------------------GFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPL 209 (336)
T ss_pred c---------------------------------CCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 0 01123458899999998754 5689999999999999999999999
Q ss_pred hhccccCCCCcch------hchhHHHHHHHHh----h---hcCccc-----hHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 003847 712 VVDELGQGNGLLV------EDKNRAIRLADAA----I---RADFEG-----KEEALLSCFKLGYSCASPLPQKRPSMKEA 773 (791)
Q Consensus 712 f~~~~~~~~~~~~------~~~~~~~~~~~~~----~---~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~ev 773 (791)
|.+.........+ ........+.+.. . ...... ......++.+++.+||+.||++|||+.|+
T Consensus 210 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~ 289 (336)
T cd07849 210 FPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEA 289 (336)
T ss_pred CCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHH
Confidence 8543210000000 0000000000000 0 000000 01124568899999999999999999999
Q ss_pred HHH--hccC
Q 003847 774 LQA--LEKI 780 (791)
Q Consensus 774 l~~--L~~i 780 (791)
++. ++..
T Consensus 290 l~hp~~~~~ 298 (336)
T cd07849 290 LAHPYLEQY 298 (336)
T ss_pred hcCcccccc
Confidence 986 5444
No 340
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=9.1e-34 Score=301.04 Aligned_cols=252 Identities=19% Similarity=0.235 Sum_probs=196.8
Q ss_pred ceeccccCceEEEEEEe----CCCcEEEEEEcCCCc----hhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEE
Q 003847 480 AYILGASGSSIMYKAVL----EDGTALAVRRIGENS----VDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIY 550 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~----~~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~ 550 (791)
.+.||+|++|.||+++. .+++.||||.++... ....+.+.+|+++++++ +|+||+++++.+...+..++||
T Consensus 5 ~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 84 (288)
T cd05583 5 LRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLIL 84 (288)
T ss_pred EEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEE
Confidence 46899999999999984 357899999987532 22345688999999999 5999999999999999999999
Q ss_pred eccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCC
Q 003847 551 DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 630 (791)
||+++++|.+++.... .+++..+..++.|+++||+|||+.+++||||||+||+++.++.++|+|||+++......
T Consensus 85 e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 159 (288)
T cd05583 85 DYVNGGELFTHLYQRE-----HFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEE 159 (288)
T ss_pred ecCCCCcHHHHHhhcC-----CcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECcccccccccc
Confidence 9999999999886542 38899999999999999999999999999999999999999999999999987653221
Q ss_pred CCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCC--CCCchhhHHHHHHHHHHHhC
Q 003847 631 SSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIK--PNPKWDVYSFGVILLELLTG 708 (791)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~--~~~~sDvwSlGvil~elltG 708 (791)
.. ......|+..|+|||.+.+.. .+.++||||||+++|||++|
T Consensus 160 ~~-----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg 204 (288)
T cd05583 160 EE-----------------------------------RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTG 204 (288)
T ss_pred cc-----------------------------------ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhC
Confidence 10 011234788899999987654 78899999999999999999
Q ss_pred CcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 709 KVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 709 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
+.||....... ...++.........+........+.+++.+||+.||++|||+.++.+.|+..
T Consensus 205 ~~p~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 205 ASPFTVDGEQN---------SQSEISRRILKSKPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred CCCcccCcccc---------hHHHHHHHHHccCCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 99985421110 0011111111222222222456788999999999999999999888877653
No 341
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.5e-33 Score=293.48 Aligned_cols=245 Identities=24% Similarity=0.318 Sum_probs=198.4
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
.+.||+|+||.||+++ ..+++.+|+|.+... .......+.+|++++++++|+||+++++++......++||||++++
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 84 (256)
T cd08530 5 LKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFG 84 (256)
T ss_pred eeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCCC
Confidence 4689999999999998 457899999998753 2334567788999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++...... ...+++..+..++.|++.||+|||+.|++|+||+|+||+++.++.+||+|||++........
T Consensus 85 ~L~~~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~----- 158 (256)
T cd08530 85 DLSKAISKRKKK-RKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMA----- 158 (256)
T ss_pred CHHHHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccCCc-----
Confidence 999988764321 12489999999999999999999999999999999999999999999999999877643210
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
....|+..|+|||.+.+..++.++|+||||+++|||++|+.||....
T Consensus 159 ---------------------------------~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~ 205 (256)
T cd08530 159 ---------------------------------KTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARS 205 (256)
T ss_pred ---------------------------------ccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 11237788999999999889999999999999999999999985432
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCcc-chHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFE-GKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
. .++........++ .......++.+++.+|++.+|++||++.|+++.
T Consensus 206 ~-------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 206 M-------------QDLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred H-------------HHHHHHHhcCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 1 0111111111111 122356778999999999999999999999863
No 342
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.4e-33 Score=299.85 Aligned_cols=248 Identities=19% Similarity=0.242 Sum_probs=193.3
Q ss_pred ceeccccCceEEEEEEe----CCCcEEEEEEcCCCc----hhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEE
Q 003847 480 AYILGASGSSIMYKAVL----EDGTALAVRRIGENS----VDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIY 550 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~----~~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~ 550 (791)
...||+|+||.||++.. .+|+.||+|++.... ....+.+.+|+++++++ +|+||+++++++..+...++||
T Consensus 5 ~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (290)
T cd05613 5 LKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLIL 84 (290)
T ss_pred eeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEE
Confidence 46899999999999985 478999999987532 22345678899999999 5999999999999999999999
Q ss_pred eccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCC
Q 003847 551 DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 630 (791)
||+++++|.+++.... ++++..+..++.|++.||+|||+.|++||||||+|||++.++.+||+|||++.......
T Consensus 85 e~~~~~~L~~~l~~~~-----~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 159 (290)
T cd05613 85 DYINGGELFTHLSQRE-----RFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDE 159 (290)
T ss_pred ecCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceeccccc
Confidence 9999999999887643 38899999999999999999999999999999999999999999999999987653221
Q ss_pred CCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC--CCCCCchhhHHHHHHHHHHHhC
Q 003847 631 SSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS--IKPNPKWDVYSFGVILLELLTG 708 (791)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~--~~~~~~sDvwSlGvil~elltG 708 (791)
.. ......|+..|+|||.+.+ ..++.++||||||+++|+|++|
T Consensus 160 ~~-----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g 204 (290)
T cd05613 160 VE-----------------------------------RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTG 204 (290)
T ss_pred cc-----------------------------------ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcC
Confidence 10 0112347888999999875 3467899999999999999999
Q ss_pred CcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 003847 709 KVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRP-----SMKEALQA 776 (791)
Q Consensus 709 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 776 (791)
+.||...... ....++.+.......+........+.+++.+||+.||++|| ++.++++.
T Consensus 205 ~~p~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 205 ASPFTVDGEK---------NSQAEISRRILKSEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred CCCCCcCCcc---------ccHHHHHHHhhccCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 9998532111 01112222222222222222456788999999999999997 67777653
No 343
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=2.2e-33 Score=297.59 Aligned_cols=254 Identities=24% Similarity=0.283 Sum_probs=191.1
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCc--hhhHHHHHHHHHHHhccCCCCccceeeEEEcc--CceEEEEeccC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGV--DEKLIIYDFVP 554 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv~e~~~ 554 (791)
...||+|++|.||+|+.. +++.||+|++.... ....+.+.+|++++++++|+|++++++++... +..++||||++
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~ 83 (287)
T cd07840 4 IAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMD 83 (287)
T ss_pred eEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEecccc
Confidence 457999999999999954 58999999997653 33345788999999999999999999999988 78999999997
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
++|.+++.... ..+++..++.++.|++.||+|||+.|++|+||||+||++++++.+||+|||++.........
T Consensus 84 -~~l~~~~~~~~----~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~-- 156 (287)
T cd07840 84 -HDLTGLLDSPE----VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSA-- 156 (287)
T ss_pred -ccHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcc--
Confidence 48888876542 14899999999999999999999999999999999999999999999999998866432210
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
......++..|+|||.+.+ ..++.++||||||+++|||++|+.||.
T Consensus 157 ---------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~ 203 (287)
T cd07840 157 ---------------------------------DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQ 203 (287)
T ss_pred ---------------------------------cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCC
Confidence 0111236778999998764 457899999999999999999999986
Q ss_pred ccccCCCCcchhc--------hh----HH--H------HHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 003847 714 DELGQGNGLLVED--------KN----RA--I------RLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEA 773 (791)
Q Consensus 714 ~~~~~~~~~~~~~--------~~----~~--~------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 773 (791)
..........+.. .. .. . ......+...+. ......+.+++.+||..+|++||+++++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~l~~~P~~Rp~~~~~ 281 (287)
T cd07840 204 GSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFK--HLIDPSALDLLDKLLTLDPKKRISADQA 281 (287)
T ss_pred CCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhc--ccCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 4321100000000 00 00 0 000000000000 0025678899999999999999999999
Q ss_pred HH
Q 003847 774 LQ 775 (791)
Q Consensus 774 l~ 775 (791)
++
T Consensus 282 l~ 283 (287)
T cd07840 282 LQ 283 (287)
T ss_pred hh
Confidence 76
No 344
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=2.3e-33 Score=292.16 Aligned_cols=247 Identities=23% Similarity=0.338 Sum_probs=199.5
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCch--hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENSV--DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
.+.||.|+||.||++... +++.||+|++..... ...+.+.+|++++++++|+|++++++.+...+..++|+||++++
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~ 84 (258)
T cd08215 5 IKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGG 84 (258)
T ss_pred EeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCCC
Confidence 467999999999999954 689999999976533 45577899999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++...... ...+++..+..++.|++.||+|||+.|++|+||+|+||+++.++.++|+|||++........
T Consensus 85 ~L~~~l~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~----- 158 (258)
T cd08215 85 DLSQKIKKQKKE-GKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVD----- 158 (258)
T ss_pred cHHHHHHHhhcc-CCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCcc-----
Confidence 999988775311 12489999999999999999999999999999999999999999999999999876543210
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
......|++.|+|||...+..++.++||||+|+++++|++|+.||....
T Consensus 159 -------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~ 207 (258)
T cd08215 159 -------------------------------LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN 207 (258)
T ss_pred -------------------------------eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc
Confidence 0112347888999999988889999999999999999999999985431
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCc-cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADF-EGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
. .++......... .........+.+++.+||..+|++||++.|+++.
T Consensus 208 ~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 208 L-------------LELALKILKGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred H-------------HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 111111111111 1111245678899999999999999999999863
No 345
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=4.7e-33 Score=299.19 Aligned_cols=242 Identities=23% Similarity=0.344 Sum_probs=189.6
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCC---chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccC
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGEN---SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
..+.||+|+||.||+|+. .+++.||+|++... .....+.+.+|++++++++|+|++++++++.+....|+||||+.
T Consensus 25 ~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 104 (313)
T cd06633 25 GLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL 104 (313)
T ss_pred cceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC
Confidence 345799999999999985 56899999998643 23344678899999999999999999999999999999999995
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
|++.+++..... ++++.++..++.|++.||+|||+.|++|+||||+||+++.++.+||+|||++.....
T Consensus 105 -~~l~~~l~~~~~----~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~------ 173 (313)
T cd06633 105 -GSASDLLEVHKK----PLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP------ 173 (313)
T ss_pred -CCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCC------
Confidence 577777665432 389999999999999999999999999999999999999999999999998753211
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc---CCCCCCchhhHHHHHHHHHHHhCCcc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR---SIKPNPKWDVYSFGVILLELLTGKVI 711 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~---~~~~~~~sDvwSlGvil~elltG~~p 711 (791)
.....|+..|+|||++. ...++.++|||||||++|||++|+.|
T Consensus 174 ----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p 219 (313)
T cd06633 174 ----------------------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 219 (313)
T ss_pred ----------------------------------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 01234788899999984 45688899999999999999999999
Q ss_pred hhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 712 VVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 712 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
|..... ............ ... ........+.+++.+||+.+|.+||++.++++.
T Consensus 220 ~~~~~~---------~~~~~~~~~~~~-~~~-~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 220 LFNMNA---------MSALYHIAQNDS-PTL-QSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred CCCCCh---------HHHHHHHHhcCC-CCC-CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 855311 000111110000 000 111133568899999999999999999999864
No 346
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=2.2e-33 Score=301.32 Aligned_cols=256 Identities=22% Similarity=0.249 Sum_probs=188.0
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCch--hhHHHHHHHHHHHhccCCCCccceeeEEEcc--CceEEEEeccC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSV--DRFRDFETQVRVIAKLVHPNLVRIRGFYWGV--DEKLIIYDFVP 554 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv~e~~~ 554 (791)
.+.||+|+||.||+|.. .+|+.||+|.++.... .....+.+|++++++++|+||+++++++... +..++||||++
T Consensus 12 ~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~ 91 (309)
T cd07845 12 LNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCE 91 (309)
T ss_pred eeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCC
Confidence 45799999999999995 4689999999864322 1223566899999999999999999998765 46799999996
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
++|.+++..... .+++.++..++.|++.||+|||+.|++||||||+||+++.++.+||+|||++.........
T Consensus 92 -~~l~~~l~~~~~----~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~-- 164 (309)
T cd07845 92 -QDLASLLDNMPT----PFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKP-- 164 (309)
T ss_pred -CCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCccCC--
Confidence 588888765432 4899999999999999999999999999999999999999999999999998876432100
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
.....++..|+|||.+.+ ..++.++||||+||++|||++|+.||.
T Consensus 165 ----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~ 210 (309)
T cd07845 165 ----------------------------------MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLP 210 (309)
T ss_pred ----------------------------------CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCC
Confidence 011225677999999865 457899999999999999999999986
Q ss_pred ccccCCCCcchhch-----hHH-HHHHH------Hhhhc-Cccch----HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 714 DELGQGNGLLVEDK-----NRA-IRLAD------AAIRA-DFEGK----EEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 714 ~~~~~~~~~~~~~~-----~~~-~~~~~------~~~~~-~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
..........+... ... ..... ..... ..... ......+.+++.+|++.||++|||++|+++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 211 GKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred CCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 43221000000000 000 00000 00000 00000 0124567899999999999999999999863
No 347
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-35 Score=302.93 Aligned_cols=254 Identities=23% Similarity=0.326 Sum_probs=201.4
Q ss_pred cchHHHhhhc-ceeccccCceEEEEEE-eCCCcEEEEEEcCCCc--hhhHHHHHHHHHHHhccCCCCccceeeEEEccCc
Q 003847 470 LELETLLKAS-AYILGASGSSIMYKAV-LEDGTALAVRRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDE 545 (791)
Q Consensus 470 ~~~~~~~~~~-~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 545 (791)
.++..+.... .++||.|.||+||-|+ .++|+.||||++.+.. ......+++|+.||++++||.||.+...|+..+.
T Consensus 558 vd~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~er 637 (888)
T KOG4236|consen 558 VDISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPER 637 (888)
T ss_pred hhHHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCce
Confidence 4444444443 5899999999999999 5689999999997642 2234678999999999999999999999999999
Q ss_pred eEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCC---CCeEEeccCc
Q 003847 546 KLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGND---MEPKIGDFGL 622 (791)
Q Consensus 546 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~---~~~kL~DFGl 622 (791)
.++|||-+.|.-|.-++....+ ++++...+-++.||+.||.|||.++|||+||||+|||+... -++||||||+
T Consensus 638 vFVVMEKl~GDMLEMILSsEkg----RL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGf 713 (888)
T KOG4236|consen 638 VFVVMEKLHGDMLEMILSSEKG----RLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGF 713 (888)
T ss_pred EEEEehhhcchHHHHHHHhhcc----cchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccc
Confidence 9999999955444444444333 39999999999999999999999999999999999999643 4699999999
Q ss_pred ccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHH
Q 003847 623 ERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVIL 702 (791)
Q Consensus 623 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil 702 (791)
|+.+.+.. ...+.+||+.|.|||+++...|+..-|+||+|||+
T Consensus 714 ARiIgEks-------------------------------------FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIi 756 (888)
T KOG4236|consen 714 ARIIGEKS-------------------------------------FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVII 756 (888)
T ss_pred eeecchhh-------------------------------------hhhhhcCCccccCHHHHhhccccccccceeeeEEE
Confidence 99986432 23356799999999999999999999999999999
Q ss_pred HHHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 703 LELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 703 ~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
|--++|..||..+.+ .. .++......-....+.+.....++||..+|+..-.+|-+.++.+.
T Consensus 757 YVsLSGTFPFNEdEd--In---------dQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~ls 818 (888)
T KOG4236|consen 757 YVSLSGTFPFNEDED--IN---------DQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLS 818 (888)
T ss_pred EEEecccccCCCccc--hh---------HHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence 999999999965421 10 111111122222345567778899999999999999999887653
No 348
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=4e-33 Score=299.09 Aligned_cols=244 Identities=23% Similarity=0.340 Sum_probs=191.6
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC---chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN---SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
...||+|+||.||+|+. .+++.||+|.+... .....+++.+|+++++.++|+|++++++++......++||||+.
T Consensus 20 ~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~- 98 (308)
T cd06634 20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL- 98 (308)
T ss_pred HHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccC-
Confidence 45799999999999995 46889999998642 23345678889999999999999999999999999999999996
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|++.+++..... ++++.++..++.|++.||.|||+.+++||||||+||+++.++.+||+|||++......
T Consensus 99 ~~l~~~~~~~~~----~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~------ 168 (308)
T cd06634 99 GSASDLLEVHKK----PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA------ 168 (308)
T ss_pred CCHHHHHHHcCC----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCc------
Confidence 688777654332 3889999999999999999999999999999999999999999999999998754321
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc---CCCCCCchhhHHHHHHHHHHHhCCcch
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR---SIKPNPKWDVYSFGVILLELLTGKVIV 712 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~---~~~~~~~sDvwSlGvil~elltG~~pf 712 (791)
....|+..|+|||.+. ...++.++|||||||++|||++|+.||
T Consensus 169 ----------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~ 214 (308)
T cd06634 169 ----------------------------------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 214 (308)
T ss_pred ----------------------------------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCC
Confidence 1123778899999974 356788999999999999999999998
Q ss_pred hccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhcc
Q 003847 713 VDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779 (791)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 779 (791)
..... ........... .... ........+.+++.+||..+|++||++.++++.---
T Consensus 215 ~~~~~---------~~~~~~~~~~~-~~~~-~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~ 270 (308)
T cd06634 215 FNMNA---------MSALYHIAQNE-SPAL-QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 270 (308)
T ss_pred ccccH---------HHHHHHHhhcC-CCCc-CcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccc
Confidence 54211 00111111111 1111 111245678899999999999999999999977443
No 349
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=3.1e-33 Score=297.91 Aligned_cols=256 Identities=18% Similarity=0.192 Sum_probs=187.6
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCch--hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENSV--DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
...||+|++|.||+|... +|+.||+|.+..... ...+.+.+|++++++++|+||+++++++...+..++||||++ +
T Consensus 7 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~ 85 (294)
T PLN00009 7 VEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLD-L 85 (294)
T ss_pred EEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEeccc-c
Confidence 468999999999999954 789999999865422 234568889999999999999999999999999999999995 5
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecC-CCCeEEeccCcccccCCCCCCCcC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN-DMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~-~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
+|.+++..... ..+++..+..++.||+.||+|||+++++||||||+||+++. ++.+||+|||++........
T Consensus 86 ~l~~~~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~---- 158 (294)
T PLN00009 86 DLKKHMDSSPD---FAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVR---- 158 (294)
T ss_pred cHHHHHHhCCC---CCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCcc----
Confidence 78777654332 13678889999999999999999999999999999999985 55799999999976532110
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
......|++.|+|||++.+ ..++.++||||+||++|+|+||+.||..
T Consensus 159 --------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~ 206 (294)
T PLN00009 159 --------------------------------TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPG 206 (294)
T ss_pred --------------------------------ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 0112236788999998866 4578999999999999999999999864
Q ss_pred cccCCCCc------------chhchhHHHHHHHH--hhhcCc--cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 715 ELGQGNGL------------LVEDKNRAIRLADA--AIRADF--EGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 715 ~~~~~~~~------------~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
........ .............. ...... .........+.+++.+|++.+|++||++.++++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 207 DSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred CCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 32100000 00000000000000 000000 000113456789999999999999999999986
No 350
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=2.6e-33 Score=298.76 Aligned_cols=248 Identities=21% Similarity=0.338 Sum_probs=189.3
Q ss_pred hcceeccccCceEEEEEEeCC-CcEEEEEEcCCCc-hhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEeccC
Q 003847 478 ASAYILGASGSSIMYKAVLED-GTALAVRRIGENS-VDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
...+.||+|++|.||+|...+ ++.||||+++... ......+..|+.++.+. .|+||+++++++......|+||||++
T Consensus 18 ~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 97 (296)
T cd06618 18 ENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMS 97 (296)
T ss_pred eeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccC
Confidence 345799999999999999754 8999999997542 23345666777777666 59999999999999999999999985
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE-KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
++|.+++..... .+++..+..++.|++.||+|||+ .||+||||+|+||++++++.+||+|||++..+.....
T Consensus 98 -~~l~~l~~~~~~----~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~-- 170 (296)
T cd06618 98 -TCLDKLLKRIQG----PIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA-- 170 (296)
T ss_pred -cCHHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCc--
Confidence 577777655332 48999999999999999999997 6999999999999999999999999999876532111
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCC----CCCchhhHHHHHHHHHHHhCC
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIK----PNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~----~~~~sDvwSlGvil~elltG~ 709 (791)
.....|+..|+|||.+.+.. ++.++||||||+++|||++|+
T Consensus 171 -----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~ 215 (296)
T cd06618 171 -----------------------------------KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQ 215 (296)
T ss_pred -----------------------------------ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCC
Confidence 01123677899999987543 788999999999999999999
Q ss_pred cchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 710 VIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 710 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
.||..... ............. ...+.......++.+++.+||..||++||++.++++.
T Consensus 216 ~p~~~~~~--------~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 216 FPYKNCKT--------EFEVLTKILQEEP-PSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred CCCCcchh--------HHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 99854210 0011111111110 1111111245678999999999999999999999865
No 351
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=4e-33 Score=302.89 Aligned_cols=260 Identities=23% Similarity=0.213 Sum_probs=192.2
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhh--------------HHHHHHHHHHHhccCCCCccceeeEEEccC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDR--------------FRDFETQVRVIAKLVHPNLVRIRGFYWGVD 544 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~ 544 (791)
..+||+|+||.||+|.. .+++.||||.+....... ...+.+|++++++++|+||+++++++...+
T Consensus 14 ~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 93 (335)
T PTZ00024 14 GAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGD 93 (335)
T ss_pred hhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCC
Confidence 45799999999999994 468999999986542211 124778999999999999999999999999
Q ss_pred ceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCccc
Q 003847 545 EKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624 (791)
Q Consensus 545 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~ 624 (791)
..++||||+. ++|.+++.... .+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++.
T Consensus 94 ~~~lv~e~~~-~~l~~~l~~~~-----~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~ 167 (335)
T PTZ00024 94 FINLVMDIMA-SDLKKVVDRKI-----RLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLAR 167 (335)
T ss_pred cEEEEEeccc-cCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCcccee
Confidence 9999999996 68988886543 38999999999999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC-CCCCchhhHHHHHHHH
Q 003847 625 LVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI-KPNPKWDVYSFGVILL 703 (791)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~~sDvwSlGvil~ 703 (791)
............... ............++..|+|||.+.+. .++.++|||||||++|
T Consensus 168 ~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~ 225 (335)
T PTZ00024 168 RYGYPPYSDTLSKDE----------------------TMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFA 225 (335)
T ss_pred ecccccccccccccc----------------------cccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHH
Confidence 765322111000000 00000111223478889999998764 4689999999999999
Q ss_pred HHHhCCcchhccccCCCCcchhchhHHHHHHHHhh--------------------hcCcc----chHHHHHHHHHHHhhc
Q 003847 704 ELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAI--------------------RADFE----GKEEALLSCFKLGYSC 759 (791)
Q Consensus 704 elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~----~~~~~~~~l~~li~~c 759 (791)
||++|+.||....... ....+..... ..... ........+.+++.+|
T Consensus 226 el~tg~~p~~~~~~~~---------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 296 (335)
T PTZ00024 226 ELLTGKPLFPGENEID---------QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSL 296 (335)
T ss_pred HHHhCCCCCCCCCHHH---------HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHH
Confidence 9999999986542110 0000000000 00000 0011245678999999
Q ss_pred cCCCCCCCCCHHHHHHH
Q 003847 760 ASPLPQKRPSMKEALQA 776 (791)
Q Consensus 760 l~~dP~~RPs~~evl~~ 776 (791)
|+.+|++||+++|++..
T Consensus 297 l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 297 LKLNPLERISAKEALKH 313 (335)
T ss_pred cCCCchhccCHHHHhcC
Confidence 99999999999999863
No 352
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=2.9e-33 Score=290.43 Aligned_cols=236 Identities=22% Similarity=0.296 Sum_probs=192.8
Q ss_pred ccccCceEEEEEEeC-CCcEEEEEEcCCCch---hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 483 LGASGSSIMYKAVLE-DGTALAVRRIGENSV---DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 483 lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
||+|+||.||++... +++.||+|.+..... .....+..|++++++++|+||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999954 589999999876432 2456789999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++.... .+++..+..++.|++.||.|||+.+++|+||||+||+++.++.++|+|||++........
T Consensus 81 ~~~l~~~~-----~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~------- 148 (250)
T cd05123 81 FSHLSKEG-----RFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS------- 148 (250)
T ss_pred HHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCC-------
Confidence 99987653 389999999999999999999999999999999999999999999999999876543210
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccccC
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQ 718 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~ 718 (791)
......|+..|+|||...+...+.++|+||||+++|+|++|+.||.....
T Consensus 149 -----------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~- 198 (250)
T cd05123 149 -----------------------------RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR- 198 (250)
T ss_pred -----------------------------cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-
Confidence 01123478889999999888889999999999999999999999854311
Q ss_pred CCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 003847 719 GNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKE 772 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 772 (791)
..............+......+.+++.+||..||++||++.+
T Consensus 199 ------------~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 199 ------------KEIYEKILKDPLRFPEFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred ------------HHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 111111111222222224567889999999999999999954
No 353
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=2.4e-33 Score=296.80 Aligned_cols=255 Identities=20% Similarity=0.246 Sum_probs=193.0
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCch--hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSV--DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
...||.|++|.||++.. .+++.+|+|.+..... .....+.+|++++++++|+||+++++++..++..++|+||+++
T Consensus 4 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~- 82 (283)
T cd05118 4 LGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT- 82 (283)
T ss_pred ceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCC-
Confidence 35799999999999995 4789999999876432 2456788999999999999999999999999999999999975
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++..... .+++..+..++.|++.||+|||+.+|+|+||||+||+++.++.+||+|||.+........
T Consensus 83 ~l~~~l~~~~~----~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~----- 153 (283)
T cd05118 83 DLYKLIKDRQR----GLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVR----- 153 (283)
T ss_pred CHHHHHHhhcc----cCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc-----
Confidence 88887766432 389999999999999999999999999999999999999999999999999876643220
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC-CCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI-KPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
......++..|+|||.+.+. .++.++||||||+++|+|++|+.||...
T Consensus 154 -------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~ 202 (283)
T cd05118 154 -------------------------------PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGK 202 (283)
T ss_pred -------------------------------cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 00112367789999998776 7899999999999999999999988543
Q ss_pred ccCCC------------CcchhchhHHHHHHHHhhhcC-----ccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 716 LGQGN------------GLLVEDKNRAIRLADAAIRAD-----FEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 716 ~~~~~------------~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
..... ..................... ..........+.+++.+||+.||.+||++.+++.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 203 SEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred CHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 21000 000000000000000000000 0011224567899999999999999999999985
No 354
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=8.3e-33 Score=293.28 Aligned_cols=246 Identities=26% Similarity=0.313 Sum_probs=189.2
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCch--hhHHHHHHHHHHHhcc---CCCCccceeeEEEccCc-----eEE
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENSV--DRFRDFETQVRVIAKL---VHPNLVRIRGFYWGVDE-----KLI 548 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~~~~~-----~~l 548 (791)
...||+|+||.||+|+.+ +++.||+|+++.... .....+.+|+.+++++ +|+||+++++++...+. .++
T Consensus 4 ~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l 83 (287)
T cd07838 4 LAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTL 83 (287)
T ss_pred EEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEE
Confidence 468999999999999965 589999999974322 2234566787777665 69999999999988776 899
Q ss_pred EEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCC
Q 003847 549 IYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTG 628 (791)
Q Consensus 549 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 628 (791)
+|||+. ++|.+++...... .+++..++.++.|++.||+|||+.+++|+||+|+||+++.++.+||+|||++.....
T Consensus 84 ~~e~~~-~~l~~~l~~~~~~---~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~ 159 (287)
T cd07838 84 VFEHVD-QDLATYLSKCPKP---GLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSF 159 (287)
T ss_pred Eehhcc-cCHHHHHHHccCC---CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccC
Confidence 999996 5898888764322 489999999999999999999999999999999999999999999999999876532
Q ss_pred CCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhC
Q 003847 629 DTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTG 708 (791)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG 708 (791)
... .....++..|+|||++.+..++.++|||||||++|||++|
T Consensus 160 ~~~-------------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~ 202 (287)
T cd07838 160 EMA-------------------------------------LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRR 202 (287)
T ss_pred Ccc-------------------------------------cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhC
Confidence 211 0112367889999999998899999999999999999999
Q ss_pred CcchhccccCCCCcchhchhHHHHHHHHh----------------------hhcCc-cchHHHHHHHHHHHhhccCCCCC
Q 003847 709 KVIVVDELGQGNGLLVEDKNRAIRLADAA----------------------IRADF-EGKEEALLSCFKLGYSCASPLPQ 765 (791)
Q Consensus 709 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~-~~~~~~~~~l~~li~~cl~~dP~ 765 (791)
++||.+..... ....+.+.. ..... .........+.+++.+||+.||+
T Consensus 203 ~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~ 273 (287)
T cd07838 203 RPLFRGTSEAD---------QLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPH 273 (287)
T ss_pred CCcccCCChHH---------HHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCc
Confidence 98886532110 011111100 00000 00112346778999999999999
Q ss_pred CCCCHHHHHH
Q 003847 766 KRPSMKEALQ 775 (791)
Q Consensus 766 ~RPs~~evl~ 775 (791)
+||+++|+++
T Consensus 274 ~Rp~~~~il~ 283 (287)
T cd07838 274 KRISAFEALQ 283 (287)
T ss_pred cCCCHHHHhc
Confidence 9999999984
No 355
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=5.6e-33 Score=298.15 Aligned_cols=258 Identities=19% Similarity=0.212 Sum_probs=186.0
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc--hhhHHHHHHHHHHHhccCCCCccceeeEEEccCc--------eEE
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDE--------KLI 548 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~--------~~l 548 (791)
...||+|+||.||+|.. .+++.||||.+.... ......+.+|++++++++||||+++++++...+. .++
T Consensus 17 ~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~l 96 (310)
T cd07865 17 LAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYL 96 (310)
T ss_pred EEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEE
Confidence 46799999999999995 468999999986432 2223456789999999999999999999876543 499
Q ss_pred EEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCC
Q 003847 549 IYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTG 628 (791)
Q Consensus 549 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 628 (791)
||||+. ++|.+++..... .+++.+++.++.|++.||+|||+.|++|+||||+||+++.++.+||+|||++.....
T Consensus 97 v~e~~~-~~l~~~l~~~~~----~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 171 (310)
T cd07865 97 VFEFCE-HDLAGLLSNKNV----KFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAFSL 171 (310)
T ss_pred EEcCCC-cCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcccccC
Confidence 999996 578877755432 389999999999999999999999999999999999999999999999999986643
Q ss_pred CCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC-CCCCchhhHHHHHHHHHHHh
Q 003847 629 DTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI-KPNPKWDVYSFGVILLELLT 707 (791)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~~sDvwSlGvil~ellt 707 (791)
...... .......++..|+|||.+.+. .++.++||||||+++|||++
T Consensus 172 ~~~~~~--------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t 219 (310)
T cd07865 172 SKNSKP--------------------------------NRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWT 219 (310)
T ss_pred CcccCC--------------------------------CCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHh
Confidence 221100 011123477889999988664 46889999999999999999
Q ss_pred CCcchhccccCCCCcchh------------chhHHHHHHHHh-hhcCcc-c------hHHHHHHHHHHHhhccCCCCCCC
Q 003847 708 GKVIVVDELGQGNGLLVE------------DKNRAIRLADAA-IRADFE-G------KEEALLSCFKLGYSCASPLPQKR 767 (791)
Q Consensus 708 G~~pf~~~~~~~~~~~~~------------~~~~~~~~~~~~-~~~~~~-~------~~~~~~~l~~li~~cl~~dP~~R 767 (791)
|+.||...........+. .... ....+.. ...... . .......+.+++.+||..||++|
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R 298 (310)
T cd07865 220 RSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDK-LELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKR 298 (310)
T ss_pred CCCCCCCCCHHHHHHHHHHHhCCCChhhcccccc-hhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhc
Confidence 999885432110000000 0000 0000000 000000 0 00012456789999999999999
Q ss_pred CCHHHHHH
Q 003847 768 PSMKEALQ 775 (791)
Q Consensus 768 Ps~~evl~ 775 (791)
||++|+++
T Consensus 299 ~t~~e~l~ 306 (310)
T cd07865 299 IDADTALN 306 (310)
T ss_pred cCHHHHhc
Confidence 99999985
No 356
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=3.6e-33 Score=294.80 Aligned_cols=262 Identities=21% Similarity=0.295 Sum_probs=200.5
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC---chhhHHHHHHHHHHHhccC-CCCccceeeEEEccCceEEEEeccC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN---SVDRFRDFETQVRVIAKLV-HPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
...||+|+||.||++.. .+++.||+|++... .....+.+..|++++++++ |+||+++++++...+..++||||++
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~ 85 (280)
T cd05581 6 GKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAP 85 (280)
T ss_pred eeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCC
Confidence 45799999999999995 47999999998753 2233467889999999998 9999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
+++|.+++.... .+++..+..|+.|++.||+|||+.|++|+||||+||+++.++.++|+|||++...........
T Consensus 86 ~~~L~~~l~~~~-----~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~ 160 (280)
T cd05581 86 NGELLQYIRKYG-----SLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPES 160 (280)
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCcccccc
Confidence 999999887653 399999999999999999999999999999999999999999999999999887654322111
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
...... .................|+..|+|||+..+..++.++||||||++++++++|+.||..
T Consensus 161 ~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 224 (280)
T cd05581 161 NKGDAT----------------NIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRG 224 (280)
T ss_pred CCCCCc----------------cccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCC
Confidence 000000 0000000111223345588899999999888899999999999999999999999864
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCH----HHHHH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSM----KEALQ 775 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~----~evl~ 775 (791)
.. ........ ..............+.+++.+||+.+|++||++ +|+++
T Consensus 225 ~~---------~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 225 SN---------EYLTFQKI----LKLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred cc---------HHHHHHHH----HhcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 32 01111111 112222222345678899999999999999999 77654
No 357
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=2.1e-33 Score=304.81 Aligned_cols=259 Identities=20% Similarity=0.281 Sum_probs=191.4
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEc----cCceEEEEec
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG----VDEKLIIYDF 552 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----~~~~~lv~e~ 552 (791)
.+.||+|++|.||+|.. .+|+.||+|++... .....+.+.+|+.++++++||||+++++++.. ....++||||
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~ 89 (334)
T cd07855 10 IENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDL 89 (334)
T ss_pred eeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEeh
Confidence 45799999999999994 56999999998754 22334677889999999999999999998764 3467999999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCC
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 632 (791)
+. ++|.+++.... .+++..+..++.||+.||+|||+.+|+||||||+||+++.++.+||+|||++.........
T Consensus 90 ~~-~~l~~~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 163 (334)
T cd07855 90 ME-SDLHHIIHSDQ-----PLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTE 163 (334)
T ss_pred hh-hhHHHHhccCC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcC
Confidence 95 68888876543 3899999999999999999999999999999999999999999999999998765432111
Q ss_pred CcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcc
Q 003847 633 SKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVI 711 (791)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~p 711 (791)
. ........|+..|+|||.+.+ ..++.++|||||||++|||++|+.|
T Consensus 164 ~--------------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~p 211 (334)
T cd07855 164 H--------------------------------KYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQL 211 (334)
T ss_pred C--------------------------------CcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCc
Confidence 0 001123358888999999865 4689999999999999999999999
Q ss_pred hhccccCCC------------Ccchhc--hhHHHHHHHHhh-hcCccc---hHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 003847 712 VVDELGQGN------------GLLVED--KNRAIRLADAAI-RADFEG---KEEALLSCFKLGYSCASPLPQKRPSMKEA 773 (791)
Q Consensus 712 f~~~~~~~~------------~~~~~~--~~~~~~~~~~~~-~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~ev 773 (791)
|.+...... ...... .....+..+... ...... .......+.+++.+||+.+|++||++.++
T Consensus 212 f~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~ 291 (334)
T cd07855 212 FPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQA 291 (334)
T ss_pred cCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 955321000 000000 000001111000 000000 01235678999999999999999999999
Q ss_pred HHH
Q 003847 774 LQA 776 (791)
Q Consensus 774 l~~ 776 (791)
+..
T Consensus 292 l~~ 294 (334)
T cd07855 292 LQH 294 (334)
T ss_pred HhC
Confidence 874
No 358
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=7.4e-33 Score=293.16 Aligned_cols=256 Identities=23% Similarity=0.280 Sum_probs=190.3
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCch-hhHHHHHHHHHHHhccC-CCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENSV-DRFRDFETQVRVIAKLV-HPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
.+.||+|++|.||+|... +++.||||++..... .......+|+..+++++ |+||+++++++..++..++||||+ +|
T Consensus 4 ~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~ 82 (283)
T cd07830 4 IKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-EG 82 (283)
T ss_pred heeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-CC
Confidence 457999999999999964 588999999865422 22234567899999998 999999999999999999999999 88
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++..... ..+++..+..++.|++.||+|||+.+++|+||||+||+++.++.++|+|||++........
T Consensus 83 ~l~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~----- 154 (283)
T cd07830 83 NLYQLMKDRKG---KPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP----- 154 (283)
T ss_pred CHHHHHHhccc---ccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCC-----
Confidence 99988876542 1389999999999999999999999999999999999999999999999999876532111
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc-CCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR-SIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~-~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
.....|+..|+|||++. ...++.++|+||||++++||++|+.||...
T Consensus 155 --------------------------------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~ 202 (283)
T cd07830 155 --------------------------------YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGS 202 (283)
T ss_pred --------------------------------cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCC
Confidence 11234778899999875 455789999999999999999999988543
Q ss_pred ccCCC--------Ccc----hhchhHHHHHHHHhhhcCccc-----hHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 716 LGQGN--------GLL----VEDKNRAIRLADAAIRADFEG-----KEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 716 ~~~~~--------~~~----~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
..... ... ..+........+......... .......+.+++.+||+.||++||+++|++..
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 203 SEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred ChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 21000 000 000000000000000000000 00123568899999999999999999999753
No 359
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=4.5e-33 Score=302.70 Aligned_cols=259 Identities=22% Similarity=0.275 Sum_probs=190.1
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCC--chhhHHHHHHHHHHHhcc-CCCCccceeeEEEccC--ceEEEEecc
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGEN--SVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVD--EKLIIYDFV 553 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~--~~~lv~e~~ 553 (791)
.+.||+|+||.||+|... +|+.||||++... .......+.+|+.+++++ +|+||+++++++...+ ..++||||+
T Consensus 12 ~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~ 91 (337)
T cd07852 12 LQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYM 91 (337)
T ss_pred hHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEeccc
Confidence 467999999999999954 6899999988542 233345677899999999 9999999999986543 579999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
+ ++|.+++... .+++..+..++.||+.||+|||+.||+||||||+||+++.++.+||+|||++..........
T Consensus 92 ~-~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~ 164 (337)
T cd07852 92 E-TDLHAVIRAN------ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENP 164 (337)
T ss_pred c-cCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccccc
Confidence 6 5998887654 28899999999999999999999999999999999999999999999999998664322110
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcch
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVIV 712 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~pf 712 (791)
.........||..|+|||.+.+ ..++.++||||||+++|||++|+.||
T Consensus 165 -------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf 213 (337)
T cd07852 165 -------------------------------ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLF 213 (337)
T ss_pred -------------------------------cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCC
Confidence 0011123458899999998754 45788999999999999999999998
Q ss_pred hccccCCCCcc--------hhc-h-----hHHHHHHHHhhhcCccc----hHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 003847 713 VDELGQGNGLL--------VED-K-----NRAIRLADAAIRADFEG----KEEALLSCFKLGYSCASPLPQKRPSMKEAL 774 (791)
Q Consensus 713 ~~~~~~~~~~~--------~~~-~-----~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl 774 (791)
........... ... . .....+.+......... .......+.+++.+||+.||++|||+.+++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il 293 (337)
T cd07852 214 PGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEAL 293 (337)
T ss_pred CCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHh
Confidence 54321100000 000 0 00000011000000000 011245788999999999999999999999
Q ss_pred HH
Q 003847 775 QA 776 (791)
Q Consensus 775 ~~ 776 (791)
+.
T Consensus 294 ~~ 295 (337)
T cd07852 294 EH 295 (337)
T ss_pred hC
Confidence 75
No 360
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=2e-33 Score=305.85 Aligned_cols=261 Identities=24% Similarity=0.293 Sum_probs=189.4
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEcc--------------C
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGV--------------D 544 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--------------~ 544 (791)
.+.||.|+||.||+|.. .+|+.||+|.+........+.+.+|++++++++||||+++++++... .
T Consensus 10 ~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (342)
T cd07854 10 LRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELN 89 (342)
T ss_pred EEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccc
Confidence 46899999999999995 56899999999776555667889999999999999999999876654 3
Q ss_pred ceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecC-CCCeEEeccCcc
Q 003847 545 EKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN-DMEPKIGDFGLE 623 (791)
Q Consensus 545 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~-~~~~kL~DFGla 623 (791)
..++||||++ ++|.+++... .+++..++.++.||+.||+|||+.||+||||||+||+++. ++.+||+|||++
T Consensus 90 ~~~lv~e~~~-~~L~~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~ 162 (342)
T cd07854 90 SVYIVQEYME-TDLANVLEQG------PLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLA 162 (342)
T ss_pred eEEEEeeccc-ccHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcccc
Confidence 4689999996 5888877532 3899999999999999999999999999999999999974 557899999998
Q ss_pred cccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHH
Q 003847 624 RLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVIL 702 (791)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil 702 (791)
+.+....... .......|+..|+|||.+.+ ..++.++|||||||++
T Consensus 163 ~~~~~~~~~~---------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil 209 (342)
T cd07854 163 RIVDPHYSHK---------------------------------GYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIF 209 (342)
T ss_pred eecCCccccc---------------------------------cccccccccccccCHHHHhCccccCchhhHHHHHHHH
Confidence 7653211100 00112247888999998754 5678899999999999
Q ss_pred HHHHhCCcchhccccCCCCcc---------hhchhHHHHHHHHhhh-----cCccc---hHHHHHHHHHHHhhccCCCCC
Q 003847 703 LELLTGKVIVVDELGQGNGLL---------VEDKNRAIRLADAAIR-----ADFEG---KEEALLSCFKLGYSCASPLPQ 765 (791)
Q Consensus 703 ~elltG~~pf~~~~~~~~~~~---------~~~~~~~~~~~~~~~~-----~~~~~---~~~~~~~l~~li~~cl~~dP~ 765 (791)
|||++|+.||........... ..+............. ...+. .......+.+++.+||..||+
T Consensus 210 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 289 (342)
T cd07854 210 AEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPM 289 (342)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCch
Confidence 999999999964321000000 0000000000000000 00000 011335678999999999999
Q ss_pred CCCCHHHHHH--HhccC
Q 003847 766 KRPSMKEALQ--ALEKI 780 (791)
Q Consensus 766 ~RPs~~evl~--~L~~i 780 (791)
+|||+.|+++ .++.+
T Consensus 290 ~R~t~~ell~h~~~~~~ 306 (342)
T cd07854 290 DRLTAEEALMHPYMSCY 306 (342)
T ss_pred hccCHHHHhCCCccccc
Confidence 9999999984 35543
No 361
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1e-32 Score=295.10 Aligned_cols=250 Identities=23% Similarity=0.288 Sum_probs=187.1
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCc--hhhHHHHHHHHHHHhccCCCCccceeeEEEccC----------ce
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVD----------EK 546 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~----------~~ 546 (791)
...||+|+||.||+|... +|+.||||+++... ......+.+|++++++++||||+++++++.+.. ..
T Consensus 12 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~ 91 (302)
T cd07864 12 IGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAF 91 (302)
T ss_pred eeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcE
Confidence 468999999999999964 68999999996532 223356788999999999999999999987655 78
Q ss_pred EEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCccccc
Q 003847 547 LIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLV 626 (791)
Q Consensus 547 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 626 (791)
++|+||+++ ++.+.+..... .+++..+..++.|++.||+|||+.||+||||||+||++++++.+||+|||++...
T Consensus 92 ~lv~e~~~~-~l~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~ 166 (302)
T cd07864 92 YLVFEYMDH-DLMGLLESGLV----HFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLY 166 (302)
T ss_pred EEEEcccCc-cHHHHHhcCCC----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccccccc
Confidence 999999975 77776654321 4899999999999999999999999999999999999999999999999998866
Q ss_pred CCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHH
Q 003847 627 TGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLEL 705 (791)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~el 705 (791)
...... ......++..|+|||.+.+ ..++.++|||||||++|||
T Consensus 167 ~~~~~~-----------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el 211 (302)
T cd07864 167 NSEESR-----------------------------------PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL 211 (302)
T ss_pred cCCccc-----------------------------------ccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHH
Confidence 432210 0011225677999998864 4568999999999999999
Q ss_pred HhCCcchhccccCCCCcchhchhHHHHHHHHh---hhcC--------------------ccchHHHHHHHHHHHhhccCC
Q 003847 706 LTGKVIVVDELGQGNGLLVEDKNRAIRLADAA---IRAD--------------------FEGKEEALLSCFKLGYSCASP 762 (791)
Q Consensus 706 ltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--------------------~~~~~~~~~~l~~li~~cl~~ 762 (791)
++|+.||...... .......+..... .... .......+..+.+++.+||..
T Consensus 212 ~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 285 (302)
T cd07864 212 FTKKPIFQANQEL------AQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTL 285 (302)
T ss_pred HhCCCCCCCCChH------HHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccC
Confidence 9999998643210 0000000000000 0000 000001245788999999999
Q ss_pred CCCCCCCHHHHHH
Q 003847 763 LPQKRPSMKEALQ 775 (791)
Q Consensus 763 dP~~RPs~~evl~ 775 (791)
||.+||+++++++
T Consensus 286 ~P~~Rp~~~~il~ 298 (302)
T cd07864 286 DPSKRCTAEEALN 298 (302)
T ss_pred ChhhCCCHHHHhc
Confidence 9999999999975
No 362
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=6.8e-33 Score=301.17 Aligned_cols=258 Identities=22% Similarity=0.252 Sum_probs=191.5
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEcc-----CceEEEEe
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGV-----DEKLIIYD 551 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~~~~lv~e 551 (791)
...||+|+||+||+++. .+++.||||.+... .......+.+|+.+++.++|+||+++++++... ...++|||
T Consensus 10 ~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e 89 (337)
T cd07858 10 IKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYE 89 (337)
T ss_pred EEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEe
Confidence 45899999999999994 57899999998653 222345677899999999999999999988654 34799999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTS 631 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 631 (791)
|+. ++|.+++.... ++++..+..++.|++.||+|||+.+++||||||+||+++.++.+||+|||+++.......
T Consensus 90 ~~~-~~L~~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~ 163 (337)
T cd07858 90 LMD-TDLHQIIRSSQ-----TLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGD 163 (337)
T ss_pred CCC-CCHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCcc
Confidence 995 68888876543 389999999999999999999999999999999999999999999999999876542210
Q ss_pred CCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCc
Q 003847 632 SSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~ 710 (791)
......|+..|+|||.+.+ ..++.++|||||||++|+|++|+.
T Consensus 164 ------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~ 207 (337)
T cd07858 164 ------------------------------------FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKP 207 (337)
T ss_pred ------------------------------------cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCC
Confidence 0112347788999998864 468899999999999999999999
Q ss_pred chhccccCC---------------CCcchhchhHHHHHHHHhhhcC-c---cchHHHHHHHHHHHhhccCCCCCCCCCHH
Q 003847 711 IVVDELGQG---------------NGLLVEDKNRAIRLADAAIRAD-F---EGKEEALLSCFKLGYSCASPLPQKRPSMK 771 (791)
Q Consensus 711 pf~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 771 (791)
||....... ....+... ............. . .........+.+++.+||+.+|++|||++
T Consensus 208 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ 286 (337)
T cd07858 208 LFPGKDYVHQLKLITELLGSPSEEDLGFIRNE-KARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVE 286 (337)
T ss_pred CCCCCChHHHHHHHHHHhCCCChHHhhhcCch-hhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHH
Confidence 985431100 00000000 0000000000000 0 00112346788999999999999999999
Q ss_pred HHHHH--hccC
Q 003847 772 EALQA--LEKI 780 (791)
Q Consensus 772 evl~~--L~~i 780 (791)
|+++. ++.+
T Consensus 287 ell~h~~~~~~ 297 (337)
T cd07858 287 EALAHPYLASL 297 (337)
T ss_pred HHHcCcchhhh
Confidence 99977 5544
No 363
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=7.5e-33 Score=300.09 Aligned_cols=265 Identities=22% Similarity=0.249 Sum_probs=198.6
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCc--hhhHHHHHHHHHHHhccCCCCccceeeEEEccC-----ceEEEEe
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVD-----EKLIIYD 551 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-----~~~lv~e 551 (791)
...||.|++|.||+|+.. +++.||||++.... ....+.+.+|+++++.++|+||+++++++...+ ..|+|||
T Consensus 5 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e 84 (330)
T cd07834 5 LKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTE 84 (330)
T ss_pred eeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEec
Confidence 468999999999999954 58999999997643 444567899999999999999999999988775 7899999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTS 631 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 631 (791)
|++ ++|.+++.... .+++..++.++.|++.||+|||+.||+||||||+||+++.++.++|+|||++........
T Consensus 85 ~~~-~~l~~~l~~~~-----~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~ 158 (330)
T cd07834 85 LME-TDLHKVIKSPQ-----PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDED 158 (330)
T ss_pred chh-hhHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccccc
Confidence 997 58888876543 389999999999999999999999999999999999999999999999999987653221
Q ss_pred CCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC-CCCCchhhHHHHHHHHHHHhCCc
Q 003847 632 SSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI-KPNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~~sDvwSlGvil~elltG~~ 710 (791)
.. .......++..|+|||++.+. .++.++||||||+++|+|++|+.
T Consensus 159 ~~---------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~ 205 (330)
T cd07834 159 EK---------------------------------GFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKP 205 (330)
T ss_pred cc---------------------------------ccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCC
Confidence 00 011123478889999999887 78999999999999999999999
Q ss_pred chhccccCCC------------Ccchh--chhHHHHHHHHhhhc-Ccc---chHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 003847 711 IVVDELGQGN------------GLLVE--DKNRAIRLADAAIRA-DFE---GKEEALLSCFKLGYSCASPLPQKRPSMKE 772 (791)
Q Consensus 711 pf~~~~~~~~------------~~~~~--~~~~~~~~~~~~~~~-~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~e 772 (791)
||........ ..... ............... ... ........+.+++.+||+.+|++||++.+
T Consensus 206 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ 285 (330)
T cd07834 206 LFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADE 285 (330)
T ss_pred CcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHH
Confidence 9865421100 00000 000000000000000 000 00113456889999999999999999999
Q ss_pred HHHH--hccCCCC
Q 003847 773 ALQA--LEKIPSS 783 (791)
Q Consensus 773 vl~~--L~~i~~~ 783 (791)
+++. ++.+...
T Consensus 286 ll~~~~~~~~~~~ 298 (330)
T cd07834 286 ALAHPYLAQLHDP 298 (330)
T ss_pred HHhCccHHhhccc
Confidence 9985 5655443
No 364
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=9.1e-33 Score=288.70 Aligned_cols=246 Identities=21% Similarity=0.265 Sum_probs=190.0
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCC-----chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEecc
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGEN-----SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
.+.||+|+||.||+++.. .+..+++|.++.. .......+..|+.++++++||||+++++++.+.+..++||||+
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (260)
T cd08222 5 QQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEYC 84 (260)
T ss_pred eeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEEEeC
Confidence 468999999999999854 3455666665432 2223345778999999999999999999999999999999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
++++|.+++....... ..+++..++.++.|++.||+|||+.|++|+||||+||+++. +.+||+|||++.........
T Consensus 85 ~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~~~- 161 (260)
T cd08222 85 EGRDLDCKLEELKHTG-KTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSCDL- 161 (260)
T ss_pred CCCCHHHHHHHHhhcc-cccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCCccc-
Confidence 9999999887533221 24899999999999999999999999999999999999975 56999999998765322110
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
.....|+..|+|||.+.+..++.++|+||||+++|+|++|..||.
T Consensus 162 -----------------------------------~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~ 206 (260)
T cd08222 162 -----------------------------------ATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFE 206 (260)
T ss_pred -----------------------------------ccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 112337888999999988888999999999999999999999985
Q ss_pred ccccCCCCcchhchhHHHHHHHHhhhcCc-cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 714 DELGQGNGLLVEDKNRAIRLADAAIRADF-EGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
.... .........+.. .........+.+++.+||..+|++||++.|+++.
T Consensus 207 ~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 207 GQNF-------------LSVVLRIVEGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred CccH-------------HHHHHHHHcCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 3210 011111111111 1122355688899999999999999999999863
No 365
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.4e-32 Score=297.21 Aligned_cols=257 Identities=22% Similarity=0.300 Sum_probs=190.3
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEc-cCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG-VDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-~~~~~lv~e~~~~ 555 (791)
...||.|+||.||++. ..+++.||||++... .....+.+.+|++++++++||||+++++++.. .+..++|+||+ +
T Consensus 15 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~-~ 93 (328)
T cd07856 15 LQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELL-G 93 (328)
T ss_pred EEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeehh-c
Confidence 4689999999999998 447999999988643 22234678889999999999999999999876 45789999999 5
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
++|.+++... .+++..+..++.|+++||+|||+.+|+||||||+||+++.++.+||+|||++.......
T Consensus 94 ~~L~~~~~~~------~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~----- 162 (328)
T cd07856 94 TDLHRLLTSR------PLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQM----- 162 (328)
T ss_pred cCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCCCc-----
Confidence 6888877543 37888899999999999999999999999999999999999999999999987542110
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
....++..|+|||.+.+ ..++.++||||||+++|||++|+.||..
T Consensus 163 ----------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~ 208 (328)
T cd07856 163 ----------------------------------TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPG 208 (328)
T ss_pred ----------------------------------CCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 11236778999998765 5689999999999999999999999854
Q ss_pred cccCCCCcchh--------c------hhHHHHHHHHh-hhcCccch---HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 715 ELGQGNGLLVE--------D------KNRAIRLADAA-IRADFEGK---EEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 715 ~~~~~~~~~~~--------~------~~~~~~~~~~~-~~~~~~~~---~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
.........+. + .....++.... .....+.. ......+.+++.+||+.+|++||++.+++..
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 209 KDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred CCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 32100000000 0 00000000000 00000100 0123678899999999999999999999876
Q ss_pred --hccCCC
Q 003847 777 --LEKIPS 782 (791)
Q Consensus 777 --L~~i~~ 782 (791)
++....
T Consensus 289 ~~~~~~~~ 296 (328)
T cd07856 289 PYLAPYHD 296 (328)
T ss_pred CccccccC
Confidence 544443
No 366
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=2.2e-32 Score=297.69 Aligned_cols=250 Identities=20% Similarity=0.253 Sum_probs=186.2
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccC------ceEEEE
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVD------EKLIIY 550 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~~~lv~ 550 (791)
...||+|+||.||++. ..+++.||||++... .....+.+.+|++++++++|+||+++++++.... ..++||
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 99 (343)
T cd07880 20 LKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVM 99 (343)
T ss_pred EEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEEE
Confidence 4579999999999998 557999999998653 2223456889999999999999999999987654 358999
Q ss_pred eccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCC
Q 003847 551 DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 630 (791)
||+ +++|.+++... .+++..++.++.|++.||+|||+.||+||||||+||+++.++.+||+|||++.......
T Consensus 100 e~~-~~~l~~~~~~~------~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~ 172 (343)
T cd07880 100 PFM-GTDLGKLMKHE------KLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSEM 172 (343)
T ss_pred ecC-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccccCc
Confidence 999 77998877542 38999999999999999999999999999999999999999999999999987543211
Q ss_pred CCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCC
Q 003847 631 SSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~ 709 (791)
....+++.|+|||.+.+ ..++.++|+||||+++|+|++|+
T Consensus 173 ---------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~ 213 (343)
T cd07880 173 ---------------------------------------TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGK 213 (343)
T ss_pred ---------------------------------------cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 11236788999999876 45789999999999999999999
Q ss_pred cchhccccCCCC-cchh-----chhH--------HHHHHHHhhhc---Cc-cchHHHHHHHHHHHhhccCCCCCCCCCHH
Q 003847 710 VIVVDELGQGNG-LLVE-----DKNR--------AIRLADAAIRA---DF-EGKEEALLSCFKLGYSCASPLPQKRPSMK 771 (791)
Q Consensus 710 ~pf~~~~~~~~~-~~~~-----~~~~--------~~~~~~~~~~~---~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 771 (791)
.||......... .... .... ........... .+ .........+.+++.+|++.||++|||+.
T Consensus 214 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~ 293 (343)
T cd07880 214 PLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAA 293 (343)
T ss_pred CCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHH
Confidence 998643210000 0000 0000 00000000000 00 00011234678999999999999999999
Q ss_pred HHHH
Q 003847 772 EALQ 775 (791)
Q Consensus 772 evl~ 775 (791)
++++
T Consensus 294 ~~l~ 297 (343)
T cd07880 294 EALA 297 (343)
T ss_pred HHhc
Confidence 9984
No 367
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=7e-33 Score=285.37 Aligned_cols=220 Identities=20% Similarity=0.196 Sum_probs=175.9
Q ss_pred cCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCChhHHHHh
Q 003847 486 SGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYR 564 (791)
Q Consensus 486 G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 564 (791)
|.+|.||+++. .+++.||+|++.... .+.+|...+....||||+++++++.+.+..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 88999999994 578999999997653 233455555666799999999999999999999999999999998876
Q ss_pred hcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCCccccCC
Q 003847 565 KMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644 (791)
Q Consensus 565 ~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~ 644 (791)
.. .+++..+..++.|++.||+|||+.||+||||||+||+++.++.++++|||.+.......
T Consensus 79 ~~-----~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~-------------- 139 (237)
T cd05576 79 FL-----NIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC-------------- 139 (237)
T ss_pred hc-----CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhcccccc--------------
Confidence 53 38999999999999999999999999999999999999999999999999876543211
Q ss_pred cccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccccCCCCcch
Q 003847 645 KRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQGNGLLV 724 (791)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~~~~ 724 (791)
....++..|+|||.+.+..++.++||||+|+++|||++|+.|+........
T Consensus 140 -------------------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~---- 190 (237)
T cd05576 140 -------------------------DGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGIN---- 190 (237)
T ss_pred -------------------------ccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc----
Confidence 011256679999999888899999999999999999999988743211100
Q ss_pred hchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHH
Q 003847 725 EDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMK 771 (791)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 771 (791)
.. .....+......+.+++.+|++.||++||++.
T Consensus 191 -~~------------~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 191 -TH------------TTLNIPEWVSEEARSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred -cc------------cccCCcccCCHHHHHHHHHHccCCHHHhcCCC
Confidence 00 00011112345678899999999999999973
No 368
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=2.8e-32 Score=319.88 Aligned_cols=142 Identities=18% Similarity=0.275 Sum_probs=127.3
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
...||+|+||.||+|... +++.||||+++... ......+..|+.+++.++|+||+++++++...+..|+||||+.+
T Consensus 9 ~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g 88 (669)
T cd05610 9 VKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIG 88 (669)
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCCC
Confidence 468999999999999954 68999999997532 23346788999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCccccc
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLV 626 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 626 (791)
++|.+++.... .+++..++.|+.||+.||+|||+.+||||||||+|||++.++.+||+|||+++..
T Consensus 89 ~~L~~li~~~~-----~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~~ 154 (669)
T cd05610 89 GDVKSLLHIYG-----YFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVT 154 (669)
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCccc
Confidence 99999987643 3889999999999999999999999999999999999999999999999998744
No 369
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-33 Score=286.33 Aligned_cols=235 Identities=23% Similarity=0.267 Sum_probs=194.3
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCch---hhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEeccC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENSV---DRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
-.+||+|+||.|..|..+ +.+.+|||+++++.. +..+--..|-++|..- +-|.+++++.+|+..+..|+||||+.
T Consensus 354 l~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvn 433 (683)
T KOG0696|consen 354 LMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVN 433 (683)
T ss_pred EEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEEEEec
Confidence 468999999999999854 578999999987522 2223334566667655 57889999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
||+|--.+++.+. +.+..+.-+|..||-||-+||++|||.||||.+|||+|.+|.+||+|||+++.---+
T Consensus 434 GGDLMyhiQQ~Gk-----FKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~----- 503 (683)
T KOG0696|consen 434 GGDLMYHIQQVGK-----FKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFD----- 503 (683)
T ss_pred CchhhhHHHHhcc-----cCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccC-----
Confidence 9999888877653 888899999999999999999999999999999999999999999999999853211
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
..++..+|||+.|+|||++..++|+..+|.|||||+||||+.|++||.+
T Consensus 504 -------------------------------~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdG 552 (683)
T KOG0696|consen 504 -------------------------------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDG 552 (683)
T ss_pred -------------------------------CcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCC
Confidence 1234578999999999999999999999999999999999999999987
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCC
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRP 768 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 768 (791)
+.. .+++..........+...+.+...+....+...|.+|.
T Consensus 553 eDE-------------~elF~aI~ehnvsyPKslSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 553 EDE-------------DELFQAIMEHNVSYPKSLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred CCH-------------HHHHHHHHHccCcCcccccHHHHHHHHHHhhcCCcccc
Confidence 532 23444444444455555777888899999999999995
No 370
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=4e-33 Score=303.56 Aligned_cols=255 Identities=19% Similarity=0.259 Sum_probs=186.3
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc--hhhHHHHHHHHHHHhccCCCCccceeeEEEccC------ceEEEE
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVD------EKLIIY 550 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~~~lv~ 550 (791)
...||+|+||.||+|+. .+|+.||||++.... ......+.+|+.++++++|+||+++++++.... ..++|+
T Consensus 20 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~ 99 (342)
T cd07879 20 LKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVM 99 (342)
T ss_pred EEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEEe
Confidence 46899999999999994 578999999986532 222356789999999999999999999987543 468999
Q ss_pred eccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCC
Q 003847 551 DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 630 (791)
||+. .+|..++.. .+++..+..++.|++.||+|||+.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 100 e~~~-~~l~~~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~- 170 (342)
T cd07879 100 PYMQ-TDLQKIMGH-------PLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAE- 170 (342)
T ss_pred cccc-cCHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC-
Confidence 9996 467654321 3899999999999999999999999999999999999999999999999998754211
Q ss_pred CCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCC
Q 003847 631 SSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~ 709 (791)
.....|+..|+|||.+.+ ..++.++|||||||++|||++|+
T Consensus 171 --------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~ 212 (342)
T cd07879 171 --------------------------------------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGK 212 (342)
T ss_pred --------------------------------------CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCC
Confidence 012236788999999876 46889999999999999999999
Q ss_pred cchhccccCCCCc-chh----chhHHHHHHH----Hh-h--hcCccch------HHHHHHHHHHHhhccCCCCCCCCCHH
Q 003847 710 VIVVDELGQGNGL-LVE----DKNRAIRLAD----AA-I--RADFEGK------EEALLSCFKLGYSCASPLPQKRPSMK 771 (791)
Q Consensus 710 ~pf~~~~~~~~~~-~~~----~~~~~~~~~~----~~-~--~~~~~~~------~~~~~~l~~li~~cl~~dP~~RPs~~ 771 (791)
.||.......... ... .......... .. . ....... ......+.+++.+||+.||++||++.
T Consensus 213 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~ 292 (342)
T cd07879 213 TLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTAT 292 (342)
T ss_pred CCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHH
Confidence 9996532100000 000 0000000000 00 0 0000000 01234678999999999999999999
Q ss_pred HHHHH--hccCC
Q 003847 772 EALQA--LEKIP 781 (791)
Q Consensus 772 evl~~--L~~i~ 781 (791)
|++.. ++.++
T Consensus 293 e~l~h~~f~~~~ 304 (342)
T cd07879 293 EALEHPYFDSFR 304 (342)
T ss_pred HHhcCcchhhcc
Confidence 99854 55543
No 371
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=2.8e-32 Score=292.90 Aligned_cols=266 Identities=20% Similarity=0.226 Sum_probs=187.4
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCch--hhHHHHHHHHHHHhccCCCCccceeeEEEccC--------ceEE
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSV--DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVD--------EKLI 548 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~--------~~~l 548 (791)
...||+|+||.||+|.. .+++.||||++..... .....+.+|++++++++|+||+++++++.... ..++
T Consensus 13 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~l 92 (311)
T cd07866 13 LGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYM 92 (311)
T ss_pred EEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCceEEE
Confidence 45799999999999995 4689999999854322 12345778999999999999999999876543 3599
Q ss_pred EEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCC
Q 003847 549 IYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTG 628 (791)
Q Consensus 549 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 628 (791)
||||+.+ +|.+.+..... .+++..+..++.|+++||+|||+.||+||||||+||++++++.+||+|||+++....
T Consensus 93 v~~~~~~-~l~~~~~~~~~----~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 167 (311)
T cd07866 93 VTPYMDH-DLSGLLENPSV----KLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYDG 167 (311)
T ss_pred EEecCCc-CHHHHHhcccc----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhccC
Confidence 9999964 67666654321 499999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHh
Q 003847 629 DTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLT 707 (791)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~ellt 707 (791)
......... ...........|++.|+|||.+.+ ..++.++|||||||++|||++
T Consensus 168 ~~~~~~~~~-------------------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~ 222 (311)
T cd07866 168 PPPNPKGGG-------------------------GGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFT 222 (311)
T ss_pred CCcccccCC-------------------------cccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHh
Confidence 221111000 001112234567889999998765 457899999999999999999
Q ss_pred CCcchhccccCCCCcchh------------chhHHHHHHHHhhhcCccc-----hHHHHHHHHHHHhhccCCCCCCCCCH
Q 003847 708 GKVIVVDELGQGNGLLVE------------DKNRAIRLADAAIRADFEG-----KEEALLSCFKLGYSCASPLPQKRPSM 770 (791)
Q Consensus 708 G~~pf~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPs~ 770 (791)
|++||.+.........+. .........+.......+. .......+.+++.+|++.||++|||+
T Consensus 223 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~ 302 (311)
T cd07866 223 RRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTA 302 (311)
T ss_pred CCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCH
Confidence 999986432210000000 0000000000000000000 00122567899999999999999999
Q ss_pred HHHHH
Q 003847 771 KEALQ 775 (791)
Q Consensus 771 ~evl~ 775 (791)
.|++.
T Consensus 303 ~ell~ 307 (311)
T cd07866 303 SDALE 307 (311)
T ss_pred HHHhc
Confidence 99875
No 372
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=3.6e-32 Score=294.86 Aligned_cols=259 Identities=22% Similarity=0.220 Sum_probs=187.0
Q ss_pred ceeccccCceEEEEEEeC-C--CcEEEEEEcCCC--chhhHHHHHHHHHHHhcc-CCCCccceeeEEEcc----CceEEE
Q 003847 480 AYILGASGSSIMYKAVLE-D--GTALAVRRIGEN--SVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGV----DEKLII 549 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~--g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~----~~~~lv 549 (791)
...||+|+||.||++... + +..||+|++... .....+.+.+|+++++++ +||||+++++++... ...+++
T Consensus 5 ~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~ 84 (332)
T cd07857 5 IKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLY 84 (332)
T ss_pred EEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEE
Confidence 468999999999999953 4 789999998653 222346778899999999 599999999875432 457889
Q ss_pred EeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCC
Q 003847 550 YDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGD 629 (791)
Q Consensus 550 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 629 (791)
+||+. ++|.+++.... .+++..++.++.||+.||+|||+.||+||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~e~~~-~~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~ 158 (332)
T cd07857 85 EELME-ADLHQIIRSGQ-----PLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSEN 158 (332)
T ss_pred Eeccc-CCHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccc
Confidence 99885 68988876433 3899999999999999999999999999999999999999999999999999865432
Q ss_pred CCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhC
Q 003847 630 TSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTG 708 (791)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG 708 (791)
.... ........||..|+|||++.+ ..++.++||||+||++|+|++|
T Consensus 159 ~~~~--------------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g 206 (332)
T cd07857 159 PGEN--------------------------------AGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGR 206 (332)
T ss_pred cccc--------------------------------cccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhC
Confidence 1110 001123458999999998765 5689999999999999999999
Q ss_pred CcchhccccCCCCcc-h-----hchhHHHHHHHHh-------h--h--cCcc-chHHHHHHHHHHHhhccCCCCCCCCCH
Q 003847 709 KVIVVDELGQGNGLL-V-----EDKNRAIRLADAA-------I--R--ADFE-GKEEALLSCFKLGYSCASPLPQKRPSM 770 (791)
Q Consensus 709 ~~pf~~~~~~~~~~~-~-----~~~~~~~~~~~~~-------~--~--~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~ 770 (791)
+.||........... + ........+.... . . ..+. ........+.+++.+|++.||++|||+
T Consensus 207 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~ 286 (332)
T cd07857 207 KPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISV 286 (332)
T ss_pred CcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCH
Confidence 999864321000000 0 0000000000000 0 0 0000 000123568899999999999999999
Q ss_pred HHHHHH
Q 003847 771 KEALQA 776 (791)
Q Consensus 771 ~evl~~ 776 (791)
.|+++.
T Consensus 287 ~~ll~~ 292 (332)
T cd07857 287 EEALEH 292 (332)
T ss_pred HHHhcC
Confidence 998753
No 373
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=7.8e-33 Score=292.70 Aligned_cols=255 Identities=22% Similarity=0.264 Sum_probs=192.4
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCc--hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
...||+|++|.||+|+.. +++.||+|.+.... ....+.+..|++++++++|+||+++++++.+.+..++||||++ +
T Consensus 4 ~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~ 82 (282)
T cd07829 4 LEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD-M 82 (282)
T ss_pred ehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC-c
Confidence 357999999999999954 58999999997653 2334677889999999999999999999999999999999997 5
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++..... .+++..+..++.|++.||+|||+.||+||||+|+||++++++.+||+|||++........
T Consensus 83 ~l~~~i~~~~~----~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~----- 153 (282)
T cd07829 83 DLKKYLDKRPG----PLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR----- 153 (282)
T ss_pred CHHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc-----
Confidence 89999887531 389999999999999999999999999999999999999999999999999876542211
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC-CCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI-KPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
......++..|+|||.+.+. .++.++|||||||++|||++|+.||...
T Consensus 154 -------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~ 202 (282)
T cd07829 154 -------------------------------TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGD 202 (282)
T ss_pred -------------------------------ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCc
Confidence 01112356779999998766 7899999999999999999999998553
Q ss_pred ccCCCCcchh------chhHHHHH-----HHHhhhcC----c-cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 716 LGQGNGLLVE------DKNRAIRL-----ADAAIRAD----F-EGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 716 ~~~~~~~~~~------~~~~~~~~-----~~~~~~~~----~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
........+. .......+ .+...... . .........+.+++.+||..||++||++.+++.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 203 SEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred cHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 2100000000 00000000 00000000 0 000012457899999999999999999999975
No 374
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=2.7e-32 Score=297.31 Aligned_cols=251 Identities=20% Similarity=0.262 Sum_probs=185.3
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCCc--hhhHHHHHHHHHHHhccCCCCccceeeEEEcc------CceEEEE
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGV------DEKLIIY 550 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~~~~lv~ 550 (791)
...||+|+||.||++. ..+++.||+|++.... ....+.+.+|++++++++|+||+++++++... ...++++
T Consensus 22 ~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 101 (345)
T cd07877 22 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 101 (345)
T ss_pred EEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEEEEe
Confidence 3579999999999998 4578999999997532 22345678899999999999999999988643 3467888
Q ss_pred eccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCC
Q 003847 551 DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 630 (791)
+++ +++|.+++... .+++..+..++.|+++||+|||+.||+||||||+||+++.++.+||+|||+++.....
T Consensus 102 ~~~-~~~L~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~- 173 (345)
T cd07877 102 HLM-GADLNNIVKCQ------KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE- 173 (345)
T ss_pred hhc-ccCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccccccccccc-
Confidence 877 78998877543 2899999999999999999999999999999999999999999999999998754211
Q ss_pred CCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCC
Q 003847 631 SSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~ 709 (791)
.....|+..|+|||.+.+ ..++.++|||||||++|||++|+
T Consensus 174 --------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~ 215 (345)
T cd07877 174 --------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 215 (345)
T ss_pred --------------------------------------ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCC
Confidence 012247888999999866 56789999999999999999999
Q ss_pred cchhccccCCCCcch-h-----chhHHHHH-------HHHhhhc--Cccc---hHHHHHHHHHHHhhccCCCCCCCCCHH
Q 003847 710 VIVVDELGQGNGLLV-E-----DKNRAIRL-------ADAAIRA--DFEG---KEEALLSCFKLGYSCASPLPQKRPSMK 771 (791)
Q Consensus 710 ~pf~~~~~~~~~~~~-~-----~~~~~~~~-------~~~~~~~--~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~ 771 (791)
.||...........+ . .......+ .-..+.. .... .......+.+++.+|++.||.+||++.
T Consensus 216 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~ 295 (345)
T cd07877 216 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA 295 (345)
T ss_pred CCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHH
Confidence 998542110000000 0 00000000 0000000 0000 001234678999999999999999999
Q ss_pred HHHHH
Q 003847 772 EALQA 776 (791)
Q Consensus 772 evl~~ 776 (791)
+++..
T Consensus 296 e~l~h 300 (345)
T cd07877 296 QALAH 300 (345)
T ss_pred HHhcC
Confidence 99865
No 375
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=1.7e-32 Score=298.74 Aligned_cols=250 Identities=22% Similarity=0.285 Sum_probs=187.9
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccCc------eEEEE
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDE------KLIIY 550 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~------~~lv~ 550 (791)
...||+|++|.||+|+.. +++.||||++... .....+.+.+|+.++++++|+||+++++++...+. .++|+
T Consensus 20 ~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 99 (343)
T cd07851 20 LSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVT 99 (343)
T ss_pred EEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEEE
Confidence 468999999999999954 6899999998653 22334567789999999999999999998876654 89999
Q ss_pred eccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCC
Q 003847 551 DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 630 (791)
||+ +++|.+++... ++++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++......
T Consensus 100 e~~-~~~L~~~~~~~------~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~- 171 (343)
T cd07851 100 HLM-GADLNNIVKCQ------KLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE- 171 (343)
T ss_pred ecC-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccccc-
Confidence 999 67999887652 3899999999999999999999999999999999999999999999999998765321
Q ss_pred CCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCC
Q 003847 631 SSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~ 709 (791)
.....++..|+|||.+.+ ..++.++|||||||++|||++|+
T Consensus 172 --------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~ 213 (343)
T cd07851 172 --------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGK 213 (343)
T ss_pred --------------------------------------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCC
Confidence 012236778999999865 46789999999999999999999
Q ss_pred cchhccccCCCCcchhc------hh--------HHHHHHHHhhhc---Ccc-chHHHHHHHHHHHhhccCCCCCCCCCHH
Q 003847 710 VIVVDELGQGNGLLVED------KN--------RAIRLADAAIRA---DFE-GKEEALLSCFKLGYSCASPLPQKRPSMK 771 (791)
Q Consensus 710 ~pf~~~~~~~~~~~~~~------~~--------~~~~~~~~~~~~---~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~ 771 (791)
.||...........+.+ .. ............ .+. ........+.+++.+||+.||++|||+.
T Consensus 214 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ 293 (343)
T cd07851 214 TLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAA 293 (343)
T ss_pred CCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHH
Confidence 99854321100000000 00 000000000000 000 0001246788999999999999999999
Q ss_pred HHHH
Q 003847 772 EALQ 775 (791)
Q Consensus 772 evl~ 775 (791)
||++
T Consensus 294 ell~ 297 (343)
T cd07851 294 EALA 297 (343)
T ss_pred HHhc
Confidence 9986
No 376
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-33 Score=316.61 Aligned_cols=259 Identities=17% Similarity=0.189 Sum_probs=208.5
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC---chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN---SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
-.+||+|+||.|..++. .+++.||.|++.+- ......-|..|-++|..-+.+-|+.++-.|.++.+.|+|||||+|
T Consensus 80 lKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMdY~pG 159 (1317)
T KOG0612|consen 80 LKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMDYMPG 159 (1317)
T ss_pred HHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEecccC
Confidence 35899999999999995 57899999999772 223345688899999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|+|..++.... ++++..++.++..|+.||+-||+.|+|||||||+|||+|..|++||+|||.|-.+..+...
T Consensus 160 GDlltLlSk~~-----~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V--- 231 (1317)
T KOG0612|consen 160 GDLLTLLSKFD-----RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTV--- 231 (1317)
T ss_pred chHHHHHhhcC-----CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCCCcE---
Confidence 99999988765 3999999999999999999999999999999999999999999999999999888754321
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc----C-CCCCCchhhHHHHHHHHHHHhCCc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR----S-IKPNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~----~-~~~~~~sDvwSlGvil~elltG~~ 710 (791)
.....+|||-|++||++. + +.|++.+|.||+||++|||+.|..
T Consensus 232 --------------------------------~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~T 279 (1317)
T KOG0612|consen 232 --------------------------------RSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGET 279 (1317)
T ss_pred --------------------------------EeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCC
Confidence 123456999999999985 3 678999999999999999999999
Q ss_pred chhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCC---HHHHHHH-------hccC
Q 003847 711 IVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPS---MKEALQA-------LEKI 780 (791)
Q Consensus 711 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs---~~evl~~-------L~~i 780 (791)
||+.+.-. .....+.+..-.-.++...+.+....+||.+.+. +|+.|.. ++|+... ...|
T Consensus 280 PFYadslv---------eTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W~~i 349 (1317)
T KOG0612|consen 280 PFYADSLV---------ETYGKIMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDWDNI 349 (1317)
T ss_pred cchHHHHH---------HHHHHHhchhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCChhhh
Confidence 99764211 1122233322222344334467788888888764 5888887 8887654 3567
Q ss_pred CCCCCCCc
Q 003847 781 PSSPSPYL 788 (791)
Q Consensus 781 ~~~~~p~~ 788 (791)
+....||.
T Consensus 350 R~~~pP~v 357 (1317)
T KOG0612|consen 350 RESVPPVV 357 (1317)
T ss_pred hhcCCCCC
Confidence 77777775
No 377
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-33 Score=300.36 Aligned_cols=232 Identities=22% Similarity=0.255 Sum_probs=190.1
Q ss_pred eeccccCceEEEEEE-eCCCcEEEEEEcCCCchhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 481 YILGASGSSIMYKAV-LEDGTALAVRRIGENSVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
.-+|.|+|+.|-.+. ..+++..+||++.+.. .+..+|+.++... +||||+++.+.+.+..+.|+|||++.|+-+
T Consensus 328 ~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~el 403 (612)
T KOG0603|consen 328 EELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGEL 403 (612)
T ss_pred cccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeehhccccHH
Confidence 349999999999998 5678999999997762 2345677676666 799999999999999999999999999988
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEe-cCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLL-GNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl-~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
.+.+.... .....+..|+.+|+.|+.|||++|||||||||+|||+ +..++++|+|||.++.......
T Consensus 404 l~ri~~~~------~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~------ 471 (612)
T KOG0603|consen 404 LRRIRSKP------EFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCD------ 471 (612)
T ss_pred HHHHHhcc------hhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchhhc------
Confidence 88776554 2336777899999999999999999999999999999 6899999999999998764311
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELG 717 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~ 717 (791)
..+=|..|.|||+.....|++++|+||||++||+|++|+.||.....
T Consensus 472 ---------------------------------tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~ 518 (612)
T KOG0603|consen 472 ---------------------------------TPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPA 518 (612)
T ss_pred ---------------------------------ccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCc
Confidence 12356779999999999999999999999999999999999965422
Q ss_pred CCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 718 QGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
+ .++......+.+. ...+....+|+.+||+.||.+||+|.++..
T Consensus 519 ~------------~ei~~~i~~~~~s--~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 519 G------------IEIHTRIQMPKFS--ECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred h------------HHHHHhhcCCccc--cccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 2 2222223333332 446778899999999999999999999875
No 378
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-32 Score=303.60 Aligned_cols=244 Identities=22% Similarity=0.322 Sum_probs=200.8
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCCchhhHHHHHHHHHHHhcc-CCCCccceeeEEEc-----cCceEEEEec
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGENSVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWG-----VDEKLIIYDF 552 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~-----~~~~~lv~e~ 552 (791)
.++||.|.+|.||+++ .++++..|||++..... ..++++.|.++++.+ .|||++.++|+|.. ++..||||||
T Consensus 24 ~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEf 102 (953)
T KOG0587|consen 24 IEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEF 102 (953)
T ss_pred EEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeec
Confidence 3689999999999999 67899999999876533 347788899999988 69999999999874 4678999999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCC
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 632 (791)
|.+|+..|+++...+. .+.|+.+..|++.++.||.+||...++|||||-.|||++.++.|||+|||.+..+....
T Consensus 103 C~gGSVTDLVKn~~g~---rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~-- 177 (953)
T KOG0587|consen 103 CGGGSVTDLVKNTKGN---RLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTV-- 177 (953)
T ss_pred cCCccHHHHHhhhccc---chhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeeeeccc--
Confidence 9999999999877633 49999999999999999999999999999999999999999999999999998765321
Q ss_pred CcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc-----CCCCCCchhhHHHHHHHHHHHh
Q 003847 633 SKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR-----SIKPNPKWDVYSFGVILLELLT 707 (791)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~-----~~~~~~~sDvwSlGvil~ellt 707 (791)
.......||++|||||++. ...|+..+|+||||++..||.-
T Consensus 178 ----------------------------------grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIElad 223 (953)
T KOG0587|consen 178 ----------------------------------GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAE 223 (953)
T ss_pred ----------------------------------ccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcC
Confidence 1223456999999999994 3457889999999999999999
Q ss_pred CCcchhccccCCCCcchhchhHHHHHHH--HhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 708 GKVIVVDELGQGNGLLVEDKNRAIRLAD--AAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 708 G~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
|.+|+.+-... ..++. +.-.+....++....++.++|..||..|-++||++.++++
T Consensus 224 G~PPl~DmHPm------------raLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 224 GAPPLCDMHPM------------RALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred CCCCccCcchh------------hhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 99998764321 11111 1111222334557789999999999999999999998875
No 379
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-33 Score=282.30 Aligned_cols=250 Identities=20% Similarity=0.264 Sum_probs=190.2
Q ss_pred eeccccCceEEEEEE-eCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccC-C-C----CccceeeEEEccCceEEEEecc
Q 003847 481 YILGASGSSIMYKAV-LEDGTALAVRRIGENSVDRFRDFETQVRVIAKLV-H-P----NLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H-~----nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
..+|+|.||.|-++. .+++..||||+++..... .+...-|+++|+++. + | -+|.+.+||.-.++.+||+|.+
T Consensus 95 ~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kY-reAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfell 173 (415)
T KOG0671|consen 95 DLLGEGTFGKVVECWDRETKEHVALKIIKNVDKY-REAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELL 173 (415)
T ss_pred hhhcCCcccceEEEeecCCCceehHHHHHHHHHH-hhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEecc
Confidence 479999999999998 455899999999765443 255677999999993 2 2 3899999999999999999998
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecC--------------------CC
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN--------------------DM 613 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~--------------------~~ 613 (791)
|-++.+++..+.-. +++...++.|+.|++++++|||+.+++|-||||+|||+.. +-
T Consensus 174 -G~S~~dFlk~N~y~---~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~ 249 (415)
T KOG0671|consen 174 -GLSTFDFLKENNYI---PFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKST 249 (415)
T ss_pred -ChhHHHHhccCCcc---ccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCc
Confidence 77999999876543 5899999999999999999999999999999999999931 23
Q ss_pred CeEEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCch
Q 003847 614 EPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKW 693 (791)
Q Consensus 614 ~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~s 693 (791)
.+||+|||.|....+.. +..+.|..|+|||++.+-.++.++
T Consensus 250 ~I~vIDFGsAtf~~e~h---------------------------------------s~iVsTRHYRAPEViLgLGwS~pC 290 (415)
T KOG0671|consen 250 AIKVIDFGSATFDHEHH---------------------------------------STIVSTRHYRAPEVILGLGWSQPC 290 (415)
T ss_pred ceEEEecCCcceeccCc---------------------------------------ceeeeccccCCchheeccCcCCcc
Confidence 48999999998755332 234578889999999999999999
Q ss_pred hhHHHHHHHHHHHhCCcchhccccCC------------CCcchhchhHHHHHHHHh----------------------hh
Q 003847 694 DVYSFGVILLELLTGKVIVVDELGQG------------NGLLVEDKNRAIRLADAA----------------------IR 739 (791)
Q Consensus 694 DvwSlGvil~elltG~~pf~~~~~~~------------~~~~~~~~~~~~~~~~~~----------------------~~ 739 (791)
||||+||||+|+.||...|..-.... ...++.... ....+... +.
T Consensus 291 DvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~-~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~ 369 (415)
T KOG0671|consen 291 DVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTR-KEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLK 369 (415)
T ss_pred CceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhh-hHhhhhcccccCccccccccchhhhcCCccHH
Confidence 99999999999999999886532110 000000000 00000000 00
Q ss_pred cCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 740 ADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 740 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
........+..++++|+++||..||.+|+|+.|++.
T Consensus 370 ~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 370 KYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred HHhccCcHHHhHHHHHHHHHHccCccccccHHHHhc
Confidence 001112234567999999999999999999999986
No 380
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-32 Score=312.80 Aligned_cols=257 Identities=27% Similarity=0.343 Sum_probs=203.1
Q ss_pred hcceeccccCceEEEEEEeC--------CCcEEEEEEcCCC-chhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceE
Q 003847 478 ASAYILGASGSSIMYKAVLE--------DGTALAVRRIGEN-SVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKL 547 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~~--------~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~ 547 (791)
...+.||+|.||.|++|... ....||||.++.. .....+.+..|+++|+.+ +|+||+.++|++...+..+
T Consensus 299 ~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~ 378 (609)
T KOG0200|consen 299 KLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLY 378 (609)
T ss_pred cccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceE
Confidence 44559999999999999832 1468999999865 334567899999999999 6999999999999999999
Q ss_pred EEEeccCCCChhHHHHhhc---------CCCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeE
Q 003847 548 IIYDFVPNGSLANARYRKM---------GSSPC--HLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPK 616 (791)
Q Consensus 548 lv~e~~~~gsL~~~l~~~~---------~~~~~--~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~k 616 (791)
+|+||++.|+|.+++...+ ..... .++..+...++.|||.|++||++.++|||||-..|||+.++..+|
T Consensus 379 ~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~k 458 (609)
T KOG0200|consen 379 VIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNKVIK 458 (609)
T ss_pred EEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCEEE
Confidence 9999999999999998876 11111 288999999999999999999999999999999999999999999
Q ss_pred EeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCC--CcccCcccccCCCCCCchh
Q 003847 617 IGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGI--SPYHAPESLRSIKPNPKWD 694 (791)
Q Consensus 617 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt--~~y~APE~~~~~~~~~~sD 694 (791)
|+|||+|+........... .-.|+ ..|||||.+....|+.|+|
T Consensus 459 IaDFGlar~~~~~~~y~~~-----------------------------------~~~~~LP~kWmApEsl~~~~ft~kSD 503 (609)
T KOG0200|consen 459 IADFGLARDHYNKDYYRTK-----------------------------------SSAGTLPVKWMAPESLFDRVFTSKSD 503 (609)
T ss_pred EccccceeccCCCCceEec-----------------------------------CCCCccceeecCHHHhccCcccccch
Confidence 9999999976543322110 00122 2399999999999999999
Q ss_pred hHHHHHHHHHHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 003847 695 VYSFGVILLELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEA 773 (791)
Q Consensus 695 vwSlGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 773 (791)
||||||++|||+| |..||.+- .....+.+...... ....+.....+++++++.||+.+|++||++.++
T Consensus 504 VWSfGI~L~EifsLG~~PYp~~---------~~~~~l~~~l~~G~--r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~ 572 (609)
T KOG0200|consen 504 VWSFGILLWEIFTLGGTPYPGI---------PPTEELLEFLKEGN--RMEQPEHCSDEIYDLMKSCWNADPEDRPTFSEC 572 (609)
T ss_pred hhHHHHHHHHHhhCCCCCCCCC---------CcHHHHHHHHhcCC--CCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHH
Confidence 9999999999999 56687541 10011111111111 123334457889999999999999999999999
Q ss_pred HHHhccC
Q 003847 774 LQALEKI 780 (791)
Q Consensus 774 l~~L~~i 780 (791)
.+.++..
T Consensus 573 ~~~~~~~ 579 (609)
T KOG0200|consen 573 VEFFEKH 579 (609)
T ss_pred HHHHHHH
Confidence 9999873
No 381
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.98 E-value=7.1e-34 Score=271.33 Aligned_cols=260 Identities=20% Similarity=0.265 Sum_probs=190.5
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCCc-hhh-HHHHHHHHHHHhccCCCCccceeeEEEcc--------CceEE
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGENS-VDR-FRDFETQVRVIAKLVHPNLVRIRGFYWGV--------DEKLI 548 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~-~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--------~~~~l 548 (791)
-..||+|.||.||+|+ ..+|+.||+|++-.+. ... -....+|+++|..++|+|++.+++.|... ...|+
T Consensus 22 ~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~yl 101 (376)
T KOG0669|consen 22 LAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYL 101 (376)
T ss_pred HHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeee
Confidence 4579999999999999 4568889998764321 111 23567899999999999999999988643 34799
Q ss_pred EEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCC
Q 003847 549 IYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTG 628 (791)
Q Consensus 549 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 628 (791)
||++|+. +|..++..... +++..++.+++.+++.||.|+|+..|+|||+|+.|+||+.+|.+||+|||+++.+..
T Consensus 102 Vf~~ceh-DLaGlLsn~~v----r~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs~ 176 (376)
T KOG0669|consen 102 VFDFCEH-DLAGLLSNRKV----RFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFST 176 (376)
T ss_pred eHHHhhh-hHHHHhcCccc----cccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccceec
Confidence 9999964 78877765432 489999999999999999999999999999999999999999999999999987654
Q ss_pred CCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHh
Q 003847 629 DTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLT 707 (791)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~ellt 707 (791)
...... ...+..+-|.-|++||.+.+ ..|+++.|||..|||+.||+|
T Consensus 177 ~~n~~k--------------------------------prytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwt 224 (376)
T KOG0669|consen 177 SKNVVK--------------------------------PRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWT 224 (376)
T ss_pred ccccCC--------------------------------CCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHc
Confidence 332211 11334456889999999876 678999999999999999999
Q ss_pred CCcchhccccCC------------CCcchhchhH--HHHHH--HHhhhcCccchHHHH------HHHHHHHhhccCCCCC
Q 003847 708 GKVIVVDELGQG------------NGLLVEDKNR--AIRLA--DAAIRADFEGKEEAL------LSCFKLGYSCASPLPQ 765 (791)
Q Consensus 708 G~~pf~~~~~~~------------~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~------~~l~~li~~cl~~dP~ 765 (791)
|.+.+.+..... ....+.+... +...+ .+...+.+...++.. ....+++..++..||.
T Consensus 225 rspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~ 304 (376)
T KOG0669|consen 225 RSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPT 304 (376)
T ss_pred cCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcc
Confidence 999886643311 1111111110 11111 001111111111122 2667899999999999
Q ss_pred CCCCHHHHHHH
Q 003847 766 KRPSMKEALQA 776 (791)
Q Consensus 766 ~RPs~~evl~~ 776 (791)
+|+++++++..
T Consensus 305 kR~~ad~alnh 315 (376)
T KOG0669|consen 305 KRIDADQALNH 315 (376)
T ss_pred cCcchHhhhch
Confidence 99999998764
No 382
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=2.6e-33 Score=290.94 Aligned_cols=241 Identities=16% Similarity=0.189 Sum_probs=197.9
Q ss_pred eccccCceEEEEEEeCCC-cEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 482 ILGASGSSIMYKAVLEDG-TALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~~~~g-~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
-||-||||.|-.+..... ..+|+|++++.. ....+.+..|-++|...+.|.||++|..|.+....|++||-|-||.
T Consensus 427 TLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClGGE 506 (732)
T KOG0614|consen 427 TLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLGGE 506 (732)
T ss_pred hcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcCch
Confidence 589999999999986543 359999997642 2334567789999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|+..+..++. ++..+.+-++..+++|++|||++|||.|||||+|.++|.+|.+||.|||+|+.+....
T Consensus 507 lWTiLrdRg~-----Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~------- 574 (732)
T KOG0614|consen 507 LWTILRDRGS-----FDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR------- 574 (732)
T ss_pred hhhhhhhcCC-----cccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCC-------
Confidence 9999887653 8999999999999999999999999999999999999999999999999999886432
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELG 717 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~ 717 (791)
.+-.+|||+.|.|||++.....+.++|.||||+++|||++|++||.....
T Consensus 575 ------------------------------KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dp 624 (732)
T KOG0614|consen 575 ------------------------------KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDP 624 (732)
T ss_pred ------------------------------ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCch
Confidence 23467899999999999999999999999999999999999999976532
Q ss_pred CCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 003847 718 QGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPS-----MKEALQ 775 (791)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 775 (791)
. .....+....-.- ..+........++++++...+|.+|.- +.||-+
T Consensus 625 m---------ktYn~ILkGid~i--~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkk 676 (732)
T KOG0614|consen 625 M---------KTYNLILKGIDKI--EFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKK 676 (732)
T ss_pred H---------HHHHHHHhhhhhh--hcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHh
Confidence 2 1111111111111 222335667788999999999999974 555544
No 383
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=3.5e-32 Score=246.99 Aligned_cols=255 Identities=22% Similarity=0.246 Sum_probs=188.2
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCCc--hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
-+.||+|.||+||+|+ .++++.||+|++.-+. ...-....+|+-+++.++|.|||+++++...+...-+|+||| ..
T Consensus 7 mekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~c-dq 85 (292)
T KOG0662|consen 7 MEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC-DQ 85 (292)
T ss_pred HHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHh-hH
Confidence 4689999999999999 5678999999986542 222346789999999999999999999999999999999999 56
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|..+.....+ .++.+.++.++.|+++||.|+|++++.|||+||.|.|++.+|++|++|||+++..+-...
T Consensus 86 dlkkyfdslng----~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvr----- 156 (292)
T KOG0662|consen 86 DLKKYFDSLNG----DLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR----- 156 (292)
T ss_pred HHHHHHHhcCC----cCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceE-----
Confidence 88887766544 389999999999999999999999999999999999999999999999999987652211
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC-CCCCchhhHHHHHHHHHHHh-CCcchhc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI-KPNPKWDVYSFGVILLELLT-GKVIVVD 714 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~~sDvwSlGvil~ellt-G~~pf~~ 714 (791)
-.+..+-|.-|++|.++.+. -|++..|+||.|||+.|+.. |++.|.+
T Consensus 157 -------------------------------cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg 205 (292)
T KOG0662|consen 157 -------------------------------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG 205 (292)
T ss_pred -------------------------------eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCC
Confidence 11223467789999999875 47999999999999999987 5554543
Q ss_pred cccCCCC--------cchhchh-HHHHHHHHhhhcCccc---hHHHH----HHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 715 ELGQGNG--------LLVEDKN-RAIRLADAAIRADFEG---KEEAL----LSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 715 ~~~~~~~--------~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~----~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
...+... ...++.+ .+..+.|...-+.++. ..+.. ..-.+++.+.+.-+|.+|.++++.++
T Consensus 206 ~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 206 NDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 2110000 0000000 0011111111111111 11111 23357888899999999999999876
No 384
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=3.7e-32 Score=252.69 Aligned_cols=206 Identities=24% Similarity=0.349 Sum_probs=168.6
Q ss_pred cchHHHhhhcceeccccCceEEEEEE-eCCCcEEEEEEcCCC-chhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCce
Q 003847 470 LELETLLKASAYILGASGSSIMYKAV-LEDGTALAVRRIGEN-SVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEK 546 (791)
Q Consensus 470 ~~~~~~~~~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~ 546 (791)
|++.+-.-....-||+|+||.|-+.+ ..+|+..|+|++... ..+..++..+|+.+..+. .+|.+|.+||.+......
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdv 120 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDV 120 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccE
Confidence 44444444455679999999999998 568999999999765 344556788888876655 799999999999999999
Q ss_pred EEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCeecCCCCCCeEecCCCCeEEeccCcccc
Q 003847 547 LIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE-KKHVHGNLKPRNVLLGNDMEPKIGDFGLERL 625 (791)
Q Consensus 547 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 625 (791)
++.||.| ..+|..+-.+.... ...+++...-+|+..+.+||.|||+ ..++|||+||+|||++.+|++|+||||.+..
T Consensus 121 wIcME~M-~tSldkfy~~v~~~-g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~ 198 (282)
T KOG0984|consen 121 WICMELM-DTSLDKFYRKVLKK-GGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGY 198 (282)
T ss_pred EEeHHHh-hhhHHHHHHHHHhc-CCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEccccccee
Confidence 9999999 45787765543322 2358999999999999999999998 6899999999999999999999999999987
Q ss_pred cCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc----CCCCCCchhhHHHHHH
Q 003847 626 VTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR----SIKPNPKWDVYSFGVI 701 (791)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~----~~~~~~~sDvwSlGvi 701 (791)
+..... .+...|...|||||.+. ...|+-|+||||||++
T Consensus 199 L~dSiA-------------------------------------kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGIt 241 (282)
T KOG0984|consen 199 LVDSIA-------------------------------------KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGIT 241 (282)
T ss_pred ehhhhH-------------------------------------HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhh
Confidence 754322 11234778899999984 3478999999999999
Q ss_pred HHHHHhCCcchhc
Q 003847 702 LLELLTGKVIVVD 714 (791)
Q Consensus 702 l~elltG~~pf~~ 714 (791)
+.||.+++.||..
T Consensus 242 miElA~lr~PY~~ 254 (282)
T KOG0984|consen 242 MIEMAILRFPYES 254 (282)
T ss_pred hhhhhhccccccc
Confidence 9999999999853
No 385
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=6.5e-33 Score=304.95 Aligned_cols=249 Identities=28% Similarity=0.396 Sum_probs=190.0
Q ss_pred hhhcceeccccCce-EEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEecc
Q 003847 476 LKASAYILGASGSS-IMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 476 ~~~~~~~lG~G~~g-~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
.....+++|.|..| .||+|..+ |+.||||++-... ..-.++|+..|+.- +|||||++++.-.++...||..|.|
T Consensus 510 ~~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC 585 (903)
T KOG1027|consen 510 FFSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC 585 (903)
T ss_pred eeccHHHcccCCCCcEEEEEeeC-CceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence 34456789999876 68999985 7899999986543 34578899999887 6999999999988999999999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecC---C--CCeEEeccCcccccCC
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN---D--MEPKIGDFGLERLVTG 628 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~---~--~~~kL~DFGla~~~~~ 628 (791)
..+|.+++... ............+.++.|+++||++||+.+||||||||.||||+. + .+++|+|||+++.+..
T Consensus 586 -~~sL~dlie~~-~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~ 663 (903)
T KOG1027|consen 586 -ACSLQDLIESS-GLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAG 663 (903)
T ss_pred -hhhHHHHHhcc-ccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCC
Confidence 56999999874 111111121455788999999999999999999999999999975 3 4689999999998875
Q ss_pred CCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhC
Q 003847 629 DTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTG 708 (791)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG 708 (791)
+..... ......||-+|+|||++....-+.++||||+|||+|+.++|
T Consensus 664 ~~sS~~---------------------------------r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltg 710 (903)
T KOG1027|consen 664 GKSSFS---------------------------------RLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTG 710 (903)
T ss_pred Ccchhh---------------------------------cccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecC
Confidence 443211 13345699999999999998888999999999999999997
Q ss_pred -CcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 709 -KVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 709 -~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
.+||.+...+.......+. . + .......+. ...+||.+|+++||..||+|.+|+.
T Consensus 711 G~HpFGd~~~R~~NIl~~~~-~--------L-~~L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 711 GSHPFGDSLERQANILTGNY-T--------L-VHLEPLPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred CccCCCchHHhhhhhhcCcc-c--------e-eeeccCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 7799775433221111100 0 0 001111112 6789999999999999999999974
No 386
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=6.3e-32 Score=286.71 Aligned_cols=239 Identities=18% Similarity=0.223 Sum_probs=180.9
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCCchh---hHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGENSVD---RFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
-.-||-|+||.|.+++ .++...||.|.+.+...- ....++.|-+||...+.+-||+||-.|.+++..|+||||++|
T Consensus 634 ik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPG 713 (1034)
T KOG0608|consen 634 IKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPG 713 (1034)
T ss_pred EeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCC
Confidence 3569999999999998 556788999998764322 234577899999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|++-.+|-+.+- +++..++.++..+..|+++.|..|+|||||||+|||||.+|.+||+|||+|.-+.-.....+.
T Consensus 714 GDmMSLLIrmgI-----FeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYY 788 (1034)
T KOG0608|consen 714 GDMMSLLIRMGI-----FEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY 788 (1034)
T ss_pred ccHHHHHHHhcc-----CHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceeccccccc
Confidence 999998887653 888899999999999999999999999999999999999999999999998755432222211
Q ss_pred CCCccccCCcccccc-cccccCCCCCCC-------C-CCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHH
Q 003847 636 GGSARNFGSKRSTAS-RDSFQDLGPGPS-------P-SPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELL 706 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~-------~-~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ell 706 (791)
... .+.+..... .....+.+...- . .........+||+.|+|||++....|+..+|.||.|||||||+
T Consensus 789 q~g---dH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~ 865 (1034)
T KOG0608|consen 789 QEG---DHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEML 865 (1034)
T ss_pred cCC---CccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHh
Confidence 100 000000000 000000000000 0 0011234578999999999999999999999999999999999
Q ss_pred hCCcchhccccCCCCcchhc
Q 003847 707 TGKVIVVDELGQGNGLLVED 726 (791)
Q Consensus 707 tG~~pf~~~~~~~~~~~~~~ 726 (791)
.|+.||.++........+.+
T Consensus 866 ~g~~pf~~~tp~~tq~kv~n 885 (1034)
T KOG0608|consen 866 VGQPPFLADTPGETQYKVIN 885 (1034)
T ss_pred hCCCCccCCCCCcceeeeee
Confidence 99999988766544444433
No 387
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=6e-32 Score=267.32 Aligned_cols=243 Identities=20% Similarity=0.258 Sum_probs=195.9
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCC---chhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEeccC
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGEN---SVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
-.+||+|+|+.|..++ .++.+.+|+|++++. ..+...=.+.|-.+..+. +||.+|.++.+|..+...++|.||++
T Consensus 255 l~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvieyv~ 334 (593)
T KOG0695|consen 255 LRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYVN 334 (593)
T ss_pred eeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEec
Confidence 3589999999999999 567899999999874 222334466777777766 79999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
||+|--.+++++ +++++.++-+...|..||.|||++|||.||||.+|+|+|..|.+||+|+|+++.--.
T Consensus 335 ggdlmfhmqrqr-----klpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~------ 403 (593)
T KOG0695|consen 335 GGDLMFHMQRQR-----KLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG------ 403 (593)
T ss_pred Ccceeeehhhhh-----cCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCC------
Confidence 999977666554 399999999999999999999999999999999999999999999999999985321
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
+...++.+|||+.|+|||++++..|+..+|.|++||+++||+.|+.||.-
T Consensus 404 ------------------------------~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdi 453 (593)
T KOG0695|consen 404 ------------------------------PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 453 (593)
T ss_pred ------------------------------CCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcce
Confidence 22345678999999999999999999999999999999999999999953
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCC
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRP 768 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 768 (791)
--.+.. +...-..++.-.+......+...+.....++..-+++||.+|.
T Consensus 454 vgm~n~-----d~ntedylfqvilekqiriprslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 454 VGMDNP-----DMNTEDYLFQVILEKQIRIPRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred ecCCCc-----ccchhHHHHHHHhhhcccccceeehhhHHHHHHhhcCCcHHhc
Confidence 221111 1111223333344444444444566677888899999999985
No 388
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.2e-32 Score=278.12 Aligned_cols=255 Identities=24% Similarity=0.284 Sum_probs=195.3
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCC--chh-----hHHHHHHHHHHHhccCCCCccceeeEEEcc-CceEEEE
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGEN--SVD-----RFRDFETQVRVIAKLVHPNLVRIRGFYWGV-DEKLIIY 550 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~--~~~-----~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-~~~~lv~ 550 (791)
-++||+|||+.||+|. +...+.||||+-.-. -.+ -.+...+|.+|-+.|+||.||++|++|.-+ +.+|-|+
T Consensus 468 LhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVL 547 (775)
T KOG1151|consen 468 LHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVL 547 (775)
T ss_pred HHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccceeee
Confidence 3689999999999998 566899999986432 111 123466899999999999999999999754 5678999
Q ss_pred eccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc--CCCeecCCCCCCeEec---CCCCeEEeccCcccc
Q 003847 551 DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE--KKHVHGNLKPRNVLLG---NDMEPKIGDFGLERL 625 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~--~~ivHrDlkp~NILl~---~~~~~kL~DFGla~~ 625 (791)
|||+|.+|.-+++.+.. +++.+++.|+.||+.||.||.+ ..|||-||||.|||+- ..|.+||.|||+++.
T Consensus 548 EYceGNDLDFYLKQhkl-----mSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKI 622 (775)
T KOG1151|consen 548 EYCEGNDLDFYLKQHKL-----MSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKI 622 (775)
T ss_pred eecCCCchhHHHHhhhh-----hhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhh
Confidence 99999999999988764 8999999999999999999998 6899999999999994 457899999999999
Q ss_pred cCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC----CCCCCchhhHHHHHH
Q 003847 626 VTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS----IKPNPKWDVYSFGVI 701 (791)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~----~~~~~~sDvwSlGvi 701 (791)
+..+......+. ...+...||.-|++||.+.- .+.+.|+||||+|||
T Consensus 623 MdddSy~~vdGm-----------------------------eLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVI 673 (775)
T KOG1151|consen 623 MDDDSYNSVDGM-----------------------------ELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVI 673 (775)
T ss_pred ccCCccCcccce-----------------------------eeecccCceeeecCcceeecCCCCCccccceeeEeeehh
Confidence 876554333221 12334569999999999843 346889999999999
Q ss_pred HHHHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 702 LLELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 702 l~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
+|..+.|+.||..+..+. ..++ ... ++.. ..-.++.......+...||++||++--++|....++..
T Consensus 674 FyQClYGrKPFGhnqsQQ--dILq-eNT---IlkA-tEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 674 FYQCLYGRKPFGHNQSQQ--DILQ-ENT---ILKA-TEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred hhhhhccCCCCCCchhHH--HHHh-hhc---hhcc-eeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 999999999996542210 0111 111 1111 11123333345677889999999999999988877754
No 389
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=8.5e-31 Score=269.72 Aligned_cols=235 Identities=26% Similarity=0.353 Sum_probs=192.1
Q ss_pred CceEEEEEEeC-CCcEEEEEEcCCCchhh-HHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCChhHHHHh
Q 003847 487 GSSIMYKAVLE-DGTALAVRRIGENSVDR-FRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYR 564 (791)
Q Consensus 487 ~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 564 (791)
+||.||++... +|+.+|+|++....... .+.+.+|++.+++++|+||+++++++......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999965 58999999997764443 67899999999999999999999999999999999999999999998876
Q ss_pred hcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCCccccCC
Q 003847 565 KMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGS 644 (791)
Q Consensus 565 ~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~ 644 (791)
... +++..+..++.+++.+++|||+.+++|+||+|+||+++.++.++|+|||.+........
T Consensus 81 ~~~-----~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~------------- 142 (244)
T smart00220 81 RGR-----LSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGL------------- 142 (244)
T ss_pred ccC-----CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeeccccc-------------
Confidence 432 78999999999999999999999999999999999999999999999999987653210
Q ss_pred cccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccccCCCCcch
Q 003847 645 KRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQGNGLLV 724 (791)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~~~~ 724 (791)
.....++..|++||...+..++.++||||||+++++|++|..||....
T Consensus 143 ------------------------~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~-------- 190 (244)
T smart00220 143 ------------------------LTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDD-------- 190 (244)
T ss_pred ------------------------cccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------
Confidence 112347788999999988888999999999999999999999985420
Q ss_pred hchhHHHHHHHHhhhcCccchHH---HHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 725 EDKNRAIRLADAAIRADFEGKEE---ALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
+. ....+............ ....+.+++.+|+..+|++||++.++++
T Consensus 191 -~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 191 -QL---LELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred -cH---HHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 11 11111111111111111 4467889999999999999999999987
No 390
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=9e-31 Score=291.76 Aligned_cols=260 Identities=19% Similarity=0.222 Sum_probs=176.8
Q ss_pred cceeccccCceEEEEEEe-----------------CCCcEEEEEEcCCCchhhHHH--------------HHHHHHHHhc
Q 003847 479 SAYILGASGSSIMYKAVL-----------------EDGTALAVRRIGENSVDRFRD--------------FETQVRVIAK 527 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-----------------~~g~~vavK~~~~~~~~~~~~--------------~~~E~~~l~~ 527 (791)
..++||+|+||+||+|.. .+++.||||++........++ ...|+.++.+
T Consensus 149 i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~l~~ 228 (507)
T PLN03224 149 LRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYMCAK 228 (507)
T ss_pred EeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHHHHH
Confidence 357899999999999963 245789999987543322233 3346777777
Q ss_pred cCCCC-----ccceeeEEEc--------cCceEEEEeccCCCChhHHHHhhcCC-------------------CCCCCCH
Q 003847 528 LVHPN-----LVRIRGFYWG--------VDEKLIIYDFVPNGSLANARYRKMGS-------------------SPCHLPW 575 (791)
Q Consensus 528 l~H~n-----Iv~l~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~~~-------------------~~~~l~~ 575 (791)
++|.+ +++++++|.. .+..++||||+++++|.++++..... ....+++
T Consensus 229 l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~ 308 (507)
T PLN03224 229 IKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDI 308 (507)
T ss_pred hhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCH
Confidence 76655 4777887753 35689999999999999998753211 0123577
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCCccccCCccccccccccc
Q 003847 576 EARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQ 655 (791)
Q Consensus 576 ~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (791)
..++.++.|++.||+|||+.+|+||||||+|||++.++.+||+|||++..+......
T Consensus 309 ~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~----------------------- 365 (507)
T PLN03224 309 NVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINF----------------------- 365 (507)
T ss_pred HHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCcc-----------------------
Confidence 889999999999999999999999999999999999999999999998754321100
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcccCcccccCCC--------------------C--CCchhhHHHHHHHHHHHhCCc-ch
Q 003847 656 DLGPGPSPSPSPSPSSLGGISPYHAPESLRSIK--------------------P--NPKWDVYSFGVILLELLTGKV-IV 712 (791)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~--------------------~--~~~sDvwSlGvil~elltG~~-pf 712 (791)
......+|+.|+|||.+.... + ..+.||||+||++|+|++|.. ||
T Consensus 366 ------------~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~ 433 (507)
T PLN03224 366 ------------NPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPV 433 (507)
T ss_pred ------------CccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCc
Confidence 001112578899999875422 1 234799999999999999986 66
Q ss_pred hccccCCCCcchhc-hhHHHHHHH-HhhhcCccchHHHHHHHHHHHhhccCCCC---CCCCCHHHHHH
Q 003847 713 VDELGQGNGLLVED-KNRAIRLAD-AAIRADFEGKEEALLSCFKLGYSCASPLP---QKRPSMKEALQ 775 (791)
Q Consensus 713 ~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP---~~RPs~~evl~ 775 (791)
.+...... .... ......+.. ......++..........+++.+||..+| .+|+|++|+++
T Consensus 434 ~~~~~f~~--~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 434 ANIRLFNT--ELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred cchhhhhh--HHhhccchHHHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 43211000 0000 000000000 00011222222345678899999999866 68999999986
No 391
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=6.6e-31 Score=300.61 Aligned_cols=259 Identities=19% Similarity=0.155 Sum_probs=163.2
Q ss_pred cceeccccCceEEEEEEeC-C----CcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeE------EEccCceE
Q 003847 479 SAYILGASGSSIMYKAVLE-D----GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGF------YWGVDEKL 547 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~-~----g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~------~~~~~~~~ 547 (791)
..+.||+|+||.||+|+.. + +..||||++...... +....| .++...+.+++.++.. .......+
T Consensus 136 l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (566)
T PLN03225 136 LGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSKKEDEYW 211 (566)
T ss_pred EeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccccCCceE
Confidence 3578999999999999954 4 689999998654321 111111 1222223333333222 23456789
Q ss_pred EEEeccCCCChhHHHHhhcCCC---------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecC-
Q 003847 548 IIYDFVPNGSLANARYRKMGSS---------------PCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN- 611 (791)
Q Consensus 548 lv~e~~~~gsL~~~l~~~~~~~---------------~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~- 611 (791)
+||||+++++|.+++....... ........+..|+.|++.||+|||+++|+||||||+|||++.
T Consensus 212 LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~~~ 291 (566)
T PLN03225 212 LVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSEG 291 (566)
T ss_pred EEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEeCC
Confidence 9999999999999887542100 001123456689999999999999999999999999999986
Q ss_pred CCCeEEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC----
Q 003847 612 DMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI---- 687 (791)
Q Consensus 612 ~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~---- 687 (791)
++.+||+|||+++.+...... ......||+.|+|||.+...
T Consensus 292 ~~~~KL~DFGlA~~l~~~~~~-----------------------------------~~~~~~~t~~Y~APE~~~~~~~~~ 336 (566)
T PLN03225 292 SGSFKIIDLGAAADLRVGINY-----------------------------------IPKEFLLDPRYAAPEQYIMSTQTP 336 (566)
T ss_pred CCcEEEEeCCCcccccccccc-----------------------------------CCcccccCCCccChHHhhccCCCC
Confidence 578999999999865322110 11234588999999965321
Q ss_pred ------------------CCCCchhhHHHHHHHHHHHhCCcchhccccCCCCcchhchhHHHHH---HHHhh----hcCc
Q 003847 688 ------------------KPNPKWDVYSFGVILLELLTGKVIVVDELGQGNGLLVEDKNRAIRL---ADAAI----RADF 742 (791)
Q Consensus 688 ------------------~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~----~~~~ 742 (791)
.++.++|||||||++|||+++..++....................+ ..... ...+
T Consensus 337 ~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (566)
T PLN03225 337 SAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGF 416 (566)
T ss_pred CCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhh
Confidence 2345679999999999999987664332110000000000000000 00000 0000
Q ss_pred cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 743 EGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 743 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
...........+|+.+||+.||++|||++|+++.
T Consensus 417 ~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~H 450 (566)
T PLN03225 417 EVLDLDGGAGWELLKSMMRFKGRQRISAKAALAH 450 (566)
T ss_pred hhccccchHHHHHHHHHccCCcccCCCHHHHhCC
Confidence 0000012235689999999999999999999874
No 392
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-30 Score=263.87 Aligned_cols=258 Identities=19% Similarity=0.263 Sum_probs=200.0
Q ss_pred ceeccccCceEEEEEEeC------CCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEcc-CceEEEEe
Q 003847 480 AYILGASGSSIMYKAVLE------DGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGV-DEKLIIYD 551 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-~~~~lv~e 551 (791)
..++-+|.||.||.|.+. +.+.|-||.++... .-....+..|...+..+.|||+.++.+++.++ +..+++|.
T Consensus 289 ~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~ 368 (563)
T KOG1024|consen 289 SCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYP 368 (563)
T ss_pred hhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEEe
Confidence 456789999999999643 34667788876653 33345688899999999999999999998765 45689999
Q ss_pred ccCCCChhHHHHhhcCCC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCC
Q 003847 552 FVPNGSLANARYRKMGSS---PCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTG 628 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~---~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 628 (791)
++.-|+|..++...++.. ...++-.+...++.|++.|++|||+.||||.||...|.++|+.-++||+|=.+++.+-+
T Consensus 369 ~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP 448 (563)
T KOG1024|consen 369 ATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFP 448 (563)
T ss_pred ccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccchhccccCc
Confidence 999999999998554432 23466677888999999999999999999999999999999999999999999998765
Q ss_pred CCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-
Q 003847 629 DTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT- 707 (791)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt- 707 (791)
.+...-.... .....||+||.+....|+.++|||||||++|||+|
T Consensus 449 ~DYhcLGDnE----------------------------------nRPvkWMslEal~n~~yssasDvWsfGVllWELmtl 494 (563)
T KOG1024|consen 449 GDYHCLGDNE----------------------------------NRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTL 494 (563)
T ss_pred ccccccCCCC----------------------------------CCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhc
Confidence 4432211110 02334999999999999999999999999999998
Q ss_pred CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCC
Q 003847 708 GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSS 783 (791)
Q Consensus 708 G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 783 (791)
|+.||.+..+.++..++.++.+ ...+.+++++++.++.-||..+|++||+.+|+..-|.+....
T Consensus 495 g~~PyaeIDPfEm~~ylkdGyR------------laQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~q 558 (563)
T KOG1024|consen 495 GKLPYAEIDPFEMEHYLKDGYR------------LAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQ 558 (563)
T ss_pred CCCCccccCHHHHHHHHhccce------------ecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHH
Confidence 7789866433222222222211 122334778899999999999999999999999998876443
No 393
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4e-31 Score=255.03 Aligned_cols=256 Identities=20% Similarity=0.273 Sum_probs=187.7
Q ss_pred eeccccCceEEEEEE-eCCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccC-----ceEEEEec
Q 003847 481 YILGASGSSIMYKAV-LEDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVD-----EKLIIYDF 552 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-----~~~lv~e~ 552 (791)
.-||.|+||+||.+. -++|+.||+|++... +....+++-+|+++|..++|.|++..+++..-.. +.|+++|.
T Consensus 59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TEL 138 (449)
T KOG0664|consen 59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTEL 138 (449)
T ss_pred CcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHH
Confidence 468999999999998 457999999998653 3344578889999999999999999999876543 56889998
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCC
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 632 (791)
| ..+|..++-. +.+++-..++.+++||++||+|||+.+|.||||||.|.|++.+-.+||+|||+++....+...
T Consensus 139 m-QSDLHKIIVS-----PQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~ 212 (449)
T KOG0664|consen 139 M-QSDLHKIIVS-----PQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRL 212 (449)
T ss_pred H-Hhhhhheecc-----CCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhhh
Confidence 8 4577665543 235889999999999999999999999999999999999999999999999999976543321
Q ss_pred CcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcc
Q 003847 633 SKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVI 711 (791)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~p 711 (791)
.++..+-|.+|+|||++.+ ..|+.+.||||+|||+.|++-.+..
T Consensus 213 -----------------------------------hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrIL 257 (449)
T KOG0664|consen 213 -----------------------------------NMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKIL 257 (449)
T ss_pred -----------------------------------hhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhh
Confidence 1223346788999999987 5689999999999999999988887
Q ss_pred hhccccCCCCcc---------hhchhHHHHH-HHHhhhcCc-----------cchHHHHHHHHHHHhhccCCCCCCCCCH
Q 003847 712 VVDELGQGNGLL---------VEDKNRAIRL-ADAAIRADF-----------EGKEEALLSCFKLGYSCASPLPQKRPSM 770 (791)
Q Consensus 712 f~~~~~~~~~~~---------~~~~~~~~~~-~~~~~~~~~-----------~~~~~~~~~l~~li~~cl~~dP~~RPs~ 770 (791)
|.....-....+ .+.++..-+- ....+++.. ........+..++...++..||++|.+.
T Consensus 258 FQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~ 337 (449)
T KOG0664|consen 258 FQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISV 337 (449)
T ss_pred hhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccH
Confidence 754322110000 0111111000 011111111 0111122345678889999999999999
Q ss_pred HHHHHHh
Q 003847 771 KEALQAL 777 (791)
Q Consensus 771 ~evl~~L 777 (791)
.+.+..+
T Consensus 338 ~~A~~~~ 344 (449)
T KOG0664|consen 338 EEALQHR 344 (449)
T ss_pred hhhcccc
Confidence 9887654
No 394
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.96 E-value=2.8e-29 Score=310.47 Aligned_cols=224 Identities=39% Similarity=0.719 Sum_probs=153.8
Q ss_pred CChhhHHHHHHHHhhccCCCCCccCCCCCCCCCCceeeeeeeCCCCCCCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCE
Q 003847 30 GLNTDGVLLLSFKYSVLSDPLGVLGSWNYNDENPCSWNGVTCASPGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQY 109 (791)
Q Consensus 30 ~~~~~~~~ll~~k~~~~~~~~~~l~sw~~~~~~~c~w~gv~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~ 109 (791)
..+.|..+|++||.++ .+|.+.+.+|+. +.+||.|.||+|+. .++|+.|+|++|++.|.++..|..+++|+.
T Consensus 26 ~~~~~~~~l~~~~~~~-~~~~~~~~~w~~-~~~~c~w~gv~c~~------~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~ 97 (968)
T PLN00113 26 LHAEELELLLSFKSSI-NDPLKYLSNWNS-SADVCLWQGITCNN------SSRVVSIDLSGKNISGKISSAIFRLPYIQT 97 (968)
T ss_pred CCHHHHHHHHHHHHhC-CCCcccCCCCCC-CCCCCcCcceecCC------CCcEEEEEecCCCccccCChHHhCCCCCCE
Confidence 4557899999999998 578888999974 45899999999972 468999999999999999989999999999
Q ss_pred EeCcCCCCCCCCccccc-CCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCc
Q 003847 110 LDLSNNSLNGSLSFSLF-NASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNY 188 (791)
Q Consensus 110 L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 188 (791)
|+|++|++.+.+|..+. ++++|++|+|++|+++|.+|. +.+++|++|+|++|.+++.+|..+.++++|++|+|++|.
T Consensus 98 L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~ 175 (968)
T PLN00113 98 INLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNV 175 (968)
T ss_pred EECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCc
Confidence 99999999888887655 777777777777777765554 345556666666666655555555555666666666665
Q ss_pred CCCCCCCCC---cccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCC
Q 003847 189 FSDGLPSKF---NSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPE 264 (791)
Q Consensus 189 l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~ 264 (791)
+.+.+|..+ ++|++|+|++|.+++.+|..++. .+|++|+|++|++++.+|..+.. +++|++|+|++|++++.+|.
T Consensus 176 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~-l~~L~~L~L~~n~l~~~~p~ 254 (968)
T PLN00113 176 LVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGG-LTSLNHLDLVYNNLTGPIPS 254 (968)
T ss_pred ccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhc-CCCCCEEECcCceeccccCh
Confidence 555555433 45555555555555555555544 34555555555555555555544 55555555555555554443
No 395
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.96 E-value=3.3e-30 Score=268.62 Aligned_cols=266 Identities=18% Similarity=0.206 Sum_probs=201.6
Q ss_pred CcccchHHHhhhcc---eeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccC------CCCccce
Q 003847 467 DKELELETLLKASA---YILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLV------HPNLVRI 536 (791)
Q Consensus 467 ~~~~~~~~~~~~~~---~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------H~nIv~l 536 (791)
...+.+.+++...- -..|+|-|++|..|.. ..|..||||+|..... ..+.-..|+++|++|+ -.|+++|
T Consensus 421 YYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hclrl 499 (752)
T KOG0670|consen 421 YYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHCLRL 499 (752)
T ss_pred eEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHHHHH
Confidence 34566666665433 3568999999999994 4588999999976533 3456678999999995 4589999
Q ss_pred eeEEEccCceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCC-CCe
Q 003847 537 RGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGND-MEP 615 (791)
Q Consensus 537 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~-~~~ 615 (791)
+..|...++.|||+|-+ ..+|.+++...+..- .|....+..++.|+.-||..|-..||+|.||||+|||+++. ..+
T Consensus 500 ~r~F~hknHLClVFE~L-slNLRevLKKyG~nv--GL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iL 576 (752)
T KOG0670|consen 500 FRHFKHKNHLCLVFEPL-SLNLREVLKKYGRNV--GLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNIL 576 (752)
T ss_pred HHHhhhcceeEEEehhh-hchHHHHHHHhCccc--ceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCccee
Confidence 99999999999999988 579999998876544 38889999999999999999999999999999999999875 457
Q ss_pred EEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhh
Q 003847 616 KIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDV 695 (791)
Q Consensus 616 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDv 695 (791)
||||||.|........+++ .-+..|+|||++.+..|+...|+
T Consensus 577 KLCDfGSA~~~~eneitPY--------------------------------------LVSRFYRaPEIiLG~~yd~~iD~ 618 (752)
T KOG0670|consen 577 KLCDFGSASFASENEITPY--------------------------------------LVSRFYRAPEIILGLPYDYPIDT 618 (752)
T ss_pred eeccCccccccccccccHH--------------------------------------HHHHhccCcceeecCcccCCccc
Confidence 9999999988765544322 24556999999999999999999
Q ss_pred HHHHHHHHHHHhCCcchhccccC------------CCCcchhchh---------------------------------HH
Q 003847 696 YSFGVILLELLTGKVIVVDELGQ------------GNGLLVEDKN---------------------------------RA 730 (791)
Q Consensus 696 wSlGvil~elltG~~pf~~~~~~------------~~~~~~~~~~---------------------------------~~ 730 (791)
||+||+||||.||+..|.+.... ....++.... ..
T Consensus 619 WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPt 698 (752)
T KOG0670|consen 619 WSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPT 698 (752)
T ss_pred eeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcc
Confidence 99999999999999887542220 0001111100 00
Q ss_pred HHHHHHhhhcC--c-cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 731 IRLADAAIRAD--F-EGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 731 ~~~~~~~~~~~--~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
.++ ...+.+. + ........++.+|+..|+..||++|.|..++|+
T Consensus 699 kdl-~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~ 745 (752)
T KOG0670|consen 699 KDL-GSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALK 745 (752)
T ss_pred hhH-HHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 111 1111111 1 122335567889999999999999999999886
No 396
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.5e-28 Score=255.51 Aligned_cols=126 Identities=18% Similarity=0.266 Sum_probs=108.2
Q ss_pred cceeccccCceEEEEEE-eCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccC-----C---CCccceeeEEEcc----Cc
Q 003847 479 SAYILGASGSSIMYKAV-LEDGTALAVRRIGENSVDRFRDFETQVRVIAKLV-----H---PNLVRIRGFYWGV----DE 545 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----H---~nIv~l~~~~~~~----~~ 545 (791)
....||-|.|++||++. .++.+.||+|+.+.... -.+....||++|++++ | .+||+|+++|... .+
T Consensus 82 v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqh-YtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~H 160 (590)
T KOG1290|consen 82 VQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQH-YTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQH 160 (590)
T ss_pred EEEeccccccceeEEEeeccCCeEEEEEEEehhhH-HHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcE
Confidence 35789999999999998 56789999999876433 2356788999999983 3 3699999999854 47
Q ss_pred eEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCeecCCCCCCeEe
Q 003847 546 KLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE-KKHVHGNLKPRNVLL 609 (791)
Q Consensus 546 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~ivHrDlkp~NILl 609 (791)
.++|+|++ |.+|..+|.....++ ++...+++|++||+.||.|||+ .||||-||||+|||+
T Consensus 161 VCMVfEvL-GdnLLklI~~s~YrG---lpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl 221 (590)
T KOG1290|consen 161 VCMVFEVL-GDNLLKLIKYSNYRG---LPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLL 221 (590)
T ss_pred EEEEehhh-hhHHHHHHHHhCCCC---CcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeee
Confidence 89999999 789999988776554 9999999999999999999998 799999999999999
No 397
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.96 E-value=8.4e-30 Score=252.46 Aligned_cols=249 Identities=22% Similarity=0.302 Sum_probs=184.8
Q ss_pred eccccCceEEEEEE-eCCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccC------ceEEEEec
Q 003847 482 ILGASGSSIMYKAV-LEDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVD------EKLIIYDF 552 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~~~lv~e~ 552 (791)
-+|.|.. .|..|. .-.++.||+|++... .....++..+|..++..++|+||++++.+|.-.. +.|+||||
T Consensus 24 p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~ 102 (369)
T KOG0665|consen 24 PIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMEL 102 (369)
T ss_pred ccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHh
Confidence 4566666 444444 235899999998553 2334567889999999999999999999986443 57999999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCC
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 632 (791)
| ..+|.+.+... ++-+.+..|..|++.|++|||+.||+||||||+||++..+..+||.|||+|+....+
T Consensus 103 m-~~nl~~vi~~e-------lDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~--- 171 (369)
T KOG0665|consen 103 M-DANLCQVILME-------LDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD--- 171 (369)
T ss_pred h-hhHHHHHHHHh-------cchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCcc---
Confidence 9 57999888732 777899999999999999999999999999999999999999999999999865422
Q ss_pred CcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcch
Q 003847 633 SKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIV 712 (791)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf 712 (791)
...+.++.|..|+|||++.+..|.+.+||||+||++.||++|+..|
T Consensus 172 ----------------------------------~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf 217 (369)
T KOG0665|consen 172 ----------------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLF 217 (369)
T ss_pred ----------------------------------cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEe
Confidence 1244567899999999999988999999999999999999999877
Q ss_pred hccc--cCCCCc----------chhchhHHHHHH-----------------HHhhhcCccchHHHHHHHHHHHhhccCCC
Q 003847 713 VDEL--GQGNGL----------LVEDKNRAIRLA-----------------DAAIRADFEGKEEALLSCFKLGYSCASPL 763 (791)
Q Consensus 713 ~~~~--~~~~~~----------~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~l~~li~~cl~~d 763 (791)
.+.. ++|... ...+.....+.+ |.......+........+.+++.+||..|
T Consensus 218 ~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~ 297 (369)
T KOG0665|consen 218 PGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVID 297 (369)
T ss_pred cCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccC
Confidence 5421 111111 000000000000 01111111112123345678999999999
Q ss_pred CCCCCCHHHHHHH
Q 003847 764 PQKRPSMKEALQA 776 (791)
Q Consensus 764 P~~RPs~~evl~~ 776 (791)
|++|.+++++|+.
T Consensus 298 pe~Risv~daL~H 310 (369)
T KOG0665|consen 298 PEKRISVDDALRH 310 (369)
T ss_pred hhhcccHHHHhcC
Confidence 9999999999974
No 398
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=1.4e-29 Score=238.79 Aligned_cols=247 Identities=15% Similarity=0.228 Sum_probs=184.6
Q ss_pred eeccccCceEEEEEE-eCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccC-CCCccceeeEEEccC--ceEEEEeccCCC
Q 003847 481 YILGASGSSIMYKAV-LEDGTALAVRRIGENSVDRFRDFETQVRVIAKLV-HPNLVRIRGFYWGVD--EKLIIYDFVPNG 556 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~--~~~lv~e~~~~g 556 (791)
..+|+|-|+.||.|. ..+++.++||+++.. ..+.+.+|+.||+.|. ||||++++++..++. ...+|+||+.+.
T Consensus 44 rk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~ 120 (338)
T KOG0668|consen 44 RKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNT 120 (338)
T ss_pred HHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhccc
Confidence 479999999999999 567899999999864 3478899999999997 999999999988765 457999999988
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCC-CCeEEeccCcccccCCCCCCCcC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGND-MEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~-~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
+...+.. .++..+++.++.+++.||.|+|+.||+|||+||.|+++|.. -.++|+|+|+|....+.....
T Consensus 121 Dfk~ly~--------tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYn-- 190 (338)
T KOG0668|consen 121 DFKQLYP--------TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN-- 190 (338)
T ss_pred cHHHHhh--------hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCCceee--
Confidence 7765432 27888999999999999999999999999999999999965 458999999999876543221
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
..+.+..|.-||.+-. ..|+..-|+|||||++..|+..+.||..
T Consensus 191 -----------------------------------VRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFh 235 (338)
T KOG0668|consen 191 -----------------------------------VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 235 (338)
T ss_pred -----------------------------------eeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccC
Confidence 2235666899999865 5678999999999999999999999854
Q ss_pred cccCCCCcc-hhc---hhHH---------------HHHHHHhhhcCc------cchHHHHHHHHHHHhhccCCCCCCCCC
Q 003847 715 ELGQGNGLL-VED---KNRA---------------IRLADAAIRADF------EGKEEALLSCFKLGYSCASPLPQKRPS 769 (791)
Q Consensus 715 ~~~~~~~~~-~~~---~~~~---------------~~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~dP~~RPs 769 (791)
......... +.. ...+ ..+.....+..+ ....-..++.++++.+.|..|..+|+|
T Consensus 236 G~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlT 315 (338)
T KOG0668|consen 236 GHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLT 315 (338)
T ss_pred CCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccc
Confidence 322110000 000 0000 000100000000 000112357889999999999999999
Q ss_pred HHHHHH
Q 003847 770 MKEALQ 775 (791)
Q Consensus 770 ~~evl~ 775 (791)
++|.+.
T Consensus 316 akEam~ 321 (338)
T KOG0668|consen 316 AKEAMA 321 (338)
T ss_pred hHHHhc
Confidence 999875
No 399
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-29 Score=267.89 Aligned_cols=193 Identities=19% Similarity=0.259 Sum_probs=166.0
Q ss_pred cceeccccCceEEEEEEeC-CCcEEEEEEcCCCchh--------hHHHHHHHHHHHhccC---CCCccceeeEEEccCce
Q 003847 479 SAYILGASGSSIMYKAVLE-DGTALAVRRIGENSVD--------RFRDFETQVRVIAKLV---HPNLVRIRGFYWGVDEK 546 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~~~ 546 (791)
+-..+|+|+||.|+.|.++ +...|+||.+.+...- ....+-.|+.||..++ |+||++++++|++++.+
T Consensus 565 tlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd~y 644 (772)
T KOG1152|consen 565 TLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDDYY 644 (772)
T ss_pred eeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCCee
Confidence 3467999999999999954 5678999998764221 1223567999999997 99999999999999999
Q ss_pred EEEEecc-CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccc
Q 003847 547 LIIYDFV-PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERL 625 (791)
Q Consensus 547 ~lv~e~~-~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 625 (791)
||+||-- ++.+|.+++..+.. +++.++..|++||+.|+++||+.||||||||-+||.++.+|-+||+|||.+.+
T Consensus 645 yl~te~hg~gIDLFd~IE~kp~-----m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~ 719 (772)
T KOG1152|consen 645 YLETEVHGEGIDLFDFIEFKPR-----MDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAY 719 (772)
T ss_pred EEEecCCCCCcchhhhhhccCc-----cchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccchhh
Confidence 9999964 56799999988764 99999999999999999999999999999999999999999999999999987
Q ss_pred cCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCC-CCchhhHHHHHHHHH
Q 003847 626 VTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKP-NPKWDVYSFGVILLE 704 (791)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~-~~~sDvwSlGvil~e 704 (791)
..... ...++||..|.|||++.+.+| +..-|||++|++||.
T Consensus 720 ~ksgp--------------------------------------fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillyt 761 (772)
T KOG1152|consen 720 TKSGP--------------------------------------FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYT 761 (772)
T ss_pred hcCCC--------------------------------------cceeeeeccccchhhhCCCccCCCcchhhhhhheeeE
Confidence 65322 124569999999999999888 667999999999999
Q ss_pred HHhCCcchhc
Q 003847 705 LLTGKVIVVD 714 (791)
Q Consensus 705 lltG~~pf~~ 714 (791)
++....||+.
T Consensus 762 ivykenpyyn 771 (772)
T KOG1152|consen 762 IVYKENPYYN 771 (772)
T ss_pred EEeccCCCcC
Confidence 9998888853
No 400
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.96 E-value=9.6e-28 Score=240.87 Aligned_cols=211 Identities=31% Similarity=0.498 Sum_probs=182.1
Q ss_pred ccccCceEEEEEEeC-CCcEEEEEEcCCCchh-hHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCChhH
Q 003847 483 LGASGSSIMYKAVLE-DGTALAVRRIGENSVD-RFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLAN 560 (791)
Q Consensus 483 lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~ 560 (791)
||+|++|.||++... +++.+++|++...... ..+.+.+|++.++.++|++|+++++++......++++||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 689999999999965 4899999999876442 34679999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecC-CCCeEEeccCcccccCCCCCCCcCCCCc
Q 003847 561 ARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN-DMEPKIGDFGLERLVTGDTSSSKAGGSA 639 (791)
Q Consensus 561 ~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~-~~~~kL~DFGla~~~~~~~~~~~~~~~~ 639 (791)
++.... ..+++..+..++.+++++|+|||+.|++|+||+|.||+++. ++.++|+|||.+........
T Consensus 81 ~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-------- 148 (215)
T cd00180 81 LLKENE----GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-------- 148 (215)
T ss_pred HHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--------
Confidence 987653 13889999999999999999999999999999999999999 89999999999886643211
Q ss_pred cccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC-CCCCchhhHHHHHHHHHHHhCCcchhccccC
Q 003847 640 RNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI-KPNPKWDVYSFGVILLELLTGKVIVVDELGQ 718 (791)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~~sDvwSlGvil~elltG~~pf~~~~~~ 718 (791)
......+...|++||..... .++.+.|+|++|+++++|
T Consensus 149 ----------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------- 187 (215)
T cd00180 149 ----------------------------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------- 187 (215)
T ss_pred ----------------------------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------
Confidence 01112366779999999877 788999999999999998
Q ss_pred CCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHh
Q 003847 719 GNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQAL 777 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 777 (791)
..+.+++.+|++.+|++||++.++++.+
T Consensus 188 -------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 -------------------------------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred -------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 4567889999999999999999998753
No 401
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=5.6e-30 Score=274.73 Aligned_cols=245 Identities=22% Similarity=0.313 Sum_probs=198.9
Q ss_pred eeccccCceEEEEEE-eCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCChh
Q 003847 481 YILGASGSSIMYKAV-LEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLA 559 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 559 (791)
..+|.|.||.|||++ ..+++..|||+++-...+.+...++|+-+++..+|+|||.+++.|...+..++.||||.+|+|+
T Consensus 21 qrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycgggslQ 100 (829)
T KOG0576|consen 21 QRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQ 100 (829)
T ss_pred eeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCccc
Confidence 479999999999999 5679999999999887777888999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCCc
Q 003847 560 NARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSA 639 (791)
Q Consensus 560 ~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~ 639 (791)
+.-+..+ ++++.++...++..++||+|||+.|-+|||||-.||++++.|.+|++|||.+..+.....
T Consensus 101 diy~~Tg-----plselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~-------- 167 (829)
T KOG0576|consen 101 DIYHVTG-----PLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIA-------- 167 (829)
T ss_pred ceeeecc-----cchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhhh--------
Confidence 8655443 499999999999999999999999999999999999999999999999999887653211
Q ss_pred cccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccc---cCCCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 640 RNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESL---RSIKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~---~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
...++.||++|||||+. +.+.|..++|||++|+...|+---++|..+-.
T Consensus 168 ----------------------------KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlh 219 (829)
T KOG0576|consen 168 ----------------------------KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLH 219 (829)
T ss_pred ----------------------------hhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccc
Confidence 23356799999999987 45789999999999999999988777754432
Q ss_pred cCCCCcchhchhHHHHHHHHhhh-cCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIR-ADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
.. +...-+...... ............+.+|++.|+..+|++||+++.++.
T Consensus 220 pm---------r~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 220 PM---------RALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred hH---------HHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 21 111111111110 111122235567889999999999999999987653
No 402
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.95 E-value=1.7e-28 Score=252.52 Aligned_cols=225 Identities=21% Similarity=0.304 Sum_probs=166.6
Q ss_pred ceeccccCceEEEEEEeC----CCcEEEEEEcCCCchhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEeccC
Q 003847 480 AYILGASGSSIMYKAVLE----DGTALAVRRIGENSVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
.+.||+|.|++||++... .++.||+|.+...+.. ..+.+|+++|..+ -+.||+++.+++..++...+|+||++
T Consensus 41 v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p--~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~ 118 (418)
T KOG1167|consen 41 VNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP--SRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFE 118 (418)
T ss_pred hccccccchhhhhhhhHhhhccccceEeeeecccccCc--hHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecccC
Confidence 468999999999999843 4789999999765433 5688999999999 59999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecC-CCCeEEeccCcccccCCCCCCC
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN-DMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~-~~~~kL~DFGla~~~~~~~~~~ 633 (791)
.....++... ++..++..+++.++.||+++|.+|||||||||+|+|.+. .+.-.|+|||+|..........
T Consensus 119 H~~f~~l~~~--------l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~ 190 (418)
T KOG1167|consen 119 HDRFRDLYRS--------LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTE 190 (418)
T ss_pred ccCHHHHHhc--------CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHhhhhhh
Confidence 9888776553 778999999999999999999999999999999999984 4678999999998432211110
Q ss_pred cCCC----Cccc-cCCcccccc-cccccCCCCCC--CCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHH
Q 003847 634 KAGG----SARN-FGSKRSTAS-RDSFQDLGPGP--SPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLE 704 (791)
Q Consensus 634 ~~~~----~~~~-~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~e 704 (791)
.... .... -+....... ...-...++.. ............||++|+|||++.. ...++++||||.|||++.
T Consensus 191 ~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Ls 270 (418)
T KOG1167|consen 191 HSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLS 270 (418)
T ss_pred hhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeeh
Confidence 0000 0000 000000000 00001112222 1223334556789999999999865 456889999999999999
Q ss_pred HHhCCcchhc
Q 003847 705 LLTGKVIVVD 714 (791)
Q Consensus 705 lltG~~pf~~ 714 (791)
+++++.||..
T Consensus 271 lls~~~PFf~ 280 (418)
T KOG1167|consen 271 LLSRRYPFFK 280 (418)
T ss_pred hhcccccccc
Confidence 9999999854
No 403
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=3e-26 Score=233.30 Aligned_cols=196 Identities=30% Similarity=0.460 Sum_probs=169.4
Q ss_pred ceeccccCceEEEEEEeCC-CcEEEEEEcCCCchh-hHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 480 AYILGASGSSIMYKAVLED-GTALAVRRIGENSVD-RFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
...||.|++|.||++...+ ++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++......++++||+++++
T Consensus 4 ~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~ 83 (225)
T smart00221 4 GKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGD 83 (225)
T ss_pred eeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCC
Confidence 4679999999999999764 899999999876544 56789999999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++..... .+++..+..++.+++.++.|||+.+++|+||+|+||+++.++.++|+|||.+.........
T Consensus 84 L~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~----- 154 (225)
T smart00221 84 LFDYLRKKGG----KLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA----- 154 (225)
T ss_pred HHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc-----
Confidence 9999876542 1788999999999999999999999999999999999999999999999998876533200
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccc-cCCCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESL-RSIKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~-~~~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
......++..|++||.. ....++.++|||+||++++||++|+.||..
T Consensus 155 ------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 155 ------------------------------LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ------------------------------cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 01123467779999998 667788899999999999999999999954
No 404
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=3.6e-27 Score=228.08 Aligned_cols=256 Identities=21% Similarity=0.235 Sum_probs=182.2
Q ss_pred cchHHHhhhcceeccccCceEEEEEEeC-CCcEEEEEEcCCCchhhHHHHHHHHHHHhcc-CCCCccceeeE-EEccCce
Q 003847 470 LELETLLKASAYILGASGSSIMYKAVLE-DGTALAVRRIGENSVDRFRDFETQVRVIAKL-VHPNLVRIRGF-YWGVDEK 546 (791)
Q Consensus 470 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~-~~~~~~~ 546 (791)
+++++. +.....+|+|.||.+-.++++ +.+.+|+|.+..... ..++|.+|..---.| .|.||+.-|++ |+..+.+
T Consensus 20 v~l~d~-y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t-t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Y 97 (378)
T KOG1345|consen 20 VDLEDV-YTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT-TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAY 97 (378)
T ss_pred cchhhh-hhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh-hHHHHHHHhccceeeccchhhhHHHHHHhhcCceE
Confidence 444443 334568999999999999954 578999999976533 357899888765555 59999988775 5666778
Q ss_pred EEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEe-c-CCCCeEEeccCccc
Q 003847 547 LIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLL-G-NDMEPKIGDFGLER 624 (791)
Q Consensus 547 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl-~-~~~~~kL~DFGla~ 624 (791)
++++||++.|+|..-+...+ +-+...++++.|+++||.|||+.++||||||.+|||+ + +..++||||||..+
T Consensus 98 vF~qE~aP~gdL~snv~~~G------igE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~ 171 (378)
T KOG1345|consen 98 VFVQEFAPRGDLRSNVEAAG------IGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTR 171 (378)
T ss_pred EEeeccCccchhhhhcCccc------ccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeeccccc
Confidence 89999999999987665533 7888999999999999999999999999999999999 3 34579999999988
Q ss_pred ccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-----CCCCCchhhHHHH
Q 003847 625 LVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-----IKPNPKWDVYSFG 699 (791)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-----~~~~~~sDvwSlG 699 (791)
..+.... ...-+..|.|||.... -...+.+|||.||
T Consensus 172 k~g~tV~---------------------------------------~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfG 212 (378)
T KOG1345|consen 172 KVGTTVK---------------------------------------YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFG 212 (378)
T ss_pred ccCceeh---------------------------------------hhhhhcccCCcHHHhhccccceEecccccchhee
Confidence 6542211 1113556999998743 2347889999999
Q ss_pred HHHHHHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHh
Q 003847 700 VILLELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQAL 777 (791)
Q Consensus 700 vil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 777 (791)
+++|.++||+.||......... . ........................+.++.++-+..+|++|-...++.++.
T Consensus 213 Ii~f~cltG~~PWQka~~~d~~-Y----~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~r 285 (378)
T KOG1345|consen 213 IIFFYCLTGKFPWQKASIMDKP-Y----WEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMR 285 (378)
T ss_pred eeeeeeecCCCcchhhhccCch-H----HHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHH
Confidence 9999999999999743221111 1 11111111111111111112345677788899999999996555555543
No 405
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.93 E-value=5.9e-26 Score=273.19 Aligned_cols=227 Identities=18% Similarity=0.131 Sum_probs=147.0
Q ss_pred ccCC-CCccceeeEE-------EccCceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCe
Q 003847 527 KLVH-PNLVRIRGFY-------WGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHV 598 (791)
Q Consensus 527 ~l~H-~nIv~l~~~~-------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~iv 598 (791)
.++| +||++++++| ...+..++++||+ +++|.+++.... ..+++.+++.|+.||++||+|||++||+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~----~~~~~~~~~~i~~qi~~al~~lH~~gIv 102 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD----RSVDAFECFHVFRQIVEIVNAAHSQGIV 102 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc----ccccHHHHHHHHHHHHHHHHHHHhCCee
Confidence 4455 5888888887 2334567788887 669999987532 1389999999999999999999999999
Q ss_pred ecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCCccccCCcccccc--cccccCCCCCCCCCC-CCCCCCCCCC
Q 003847 599 HGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTAS--RDSFQDLGPGPSPSP-SPSPSSLGGI 675 (791)
Q Consensus 599 HrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~gt 675 (791)
||||||+||||+..+.+|++|||++.....+..... ....|+..+.... ........ .....+ .......+||
T Consensus 103 HrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~---ki~DfG~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~gt 178 (793)
T PLN00181 103 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATT---KSREIGSSRREEILSERRIEKLE-EVKKQPFPMKQILAMEM 178 (793)
T ss_pred eccCCchhEEEcccCcEEEeeccccCcccccccCcc---cccccccccccccccccchhhhh-ccccCCCcccccccCCC
Confidence 999999999998888888888887765432211000 0001111100000 00000000 000000 0111234689
Q ss_pred CcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHH
Q 003847 676 SPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKL 755 (791)
Q Consensus 676 ~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 755 (791)
+.|||||++.+..|+.++|||||||++|||++|..|+.... .....+....... ..........++
T Consensus 179 ~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~-----------~~~~~~~~~~~~~---~~~~~~~~~~~~ 244 (793)
T PLN00181 179 SWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS-----------RTMSSLRHRVLPP---QILLNWPKEASF 244 (793)
T ss_pred cceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH-----------HHHHHHHHhhcCh---hhhhcCHHHHHH
Confidence 99999999999999999999999999999999988764321 0011111111111 011123445688
Q ss_pred HhhccCCCCCCCCCHHHHHHH
Q 003847 756 GYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 756 i~~cl~~dP~~RPs~~evl~~ 776 (791)
+.+||+.+|.+||++.|+++.
T Consensus 245 ~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 245 CLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred HHHhCCCChhhCcChHHHhhc
Confidence 889999999999999999863
No 406
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.92 E-value=7.5e-25 Score=214.51 Aligned_cols=164 Identities=25% Similarity=0.191 Sum_probs=124.9
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|+|.+++..... ++++.+++.|+.|++.||+|||+.+ ||+|||++.++.+|+ ||+++......
T Consensus 1 GsL~~~l~~~~~----~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~----- 63 (176)
T smart00750 1 VSLADILEVRGR----PLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPEQ----- 63 (176)
T ss_pred CcHHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecccc-----
Confidence 689998876432 3999999999999999999999998 999999999999999 99987653210
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
..||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 64 ------------------------------------~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~ 107 (176)
T smart00750 64 ------------------------------------SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEE 107 (176)
T ss_pred ------------------------------------CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCcccc
Confidence 13788999999999999999999999999999999999998543
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhc---CccchHHHHH--HHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRA---DFEGKEEALL--SCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
... ......+....... .......... .+.+++.+||+.+|++||++.|+++.+..+
T Consensus 108 ~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 108 REL--------SAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred chh--------cHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 210 00111111111111 0011122222 689999999999999999999999987654
No 407
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.90 E-value=3.4e-23 Score=221.67 Aligned_cols=133 Identities=22% Similarity=0.204 Sum_probs=108.6
Q ss_pred ceeccccCceEEEEEEeC--CCcEEEEEEcCCC-----chhhHHHHHHHHHHHhccCCCCccc-eeeEEEccCceEEEEe
Q 003847 480 AYILGASGSSIMYKAVLE--DGTALAVRRIGEN-----SVDRFRDFETQVRVIAKLVHPNLVR-IRGFYWGVDEKLIIYD 551 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~--~g~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~nIv~-l~~~~~~~~~~~lv~e 551 (791)
...||+|+||+||+|... +++.||||++... .....+.+.+|+++|++++|+||++ +++ .+..|+|||
T Consensus 23 ~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~----~~~~~LVmE 98 (365)
T PRK09188 23 TAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA----TGKDGLVRG 98 (365)
T ss_pred ccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE----cCCcEEEEE
Confidence 468999999999999854 5788899987533 1223467999999999999999985 443 246899999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCC-CCCCeEecCCCCeEEeccCcccccCC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL-KPRNVLLGNDMEPKIGDFGLERLVTG 628 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDl-kp~NILl~~~~~~kL~DFGla~~~~~ 628 (791)
|++|++|... . . .. ...++.|+++||+|||+.||+|||| ||+|||++.++.+||+|||+|+.+..
T Consensus 99 ~~~G~~L~~~-~--~------~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~ 164 (365)
T PRK09188 99 WTEGVPLHLA-R--P------HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRR 164 (365)
T ss_pred ccCCCCHHHh-C--c------cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceeccc
Confidence 9999999621 1 0 11 1467899999999999999999999 99999999999999999999998754
No 408
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=2.8e-22 Score=215.50 Aligned_cols=261 Identities=19% Similarity=0.193 Sum_probs=188.9
Q ss_pred cceeccccCceEEEEEEeCC--CcEEEEEEcCCCchhhHHHHHHHHHHHhccCC----CCccceeeEE-EccCceEEEEe
Q 003847 479 SAYILGASGSSIMYKAVLED--GTALAVRRIGENSVDRFRDFETQVRVIAKLVH----PNLVRIRGFY-WGVDEKLIIYD 551 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~--g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H----~nIv~l~~~~-~~~~~~~lv~e 551 (791)
....||+|+||.||.+.... ...+|+|............+..|+.++..+.. +++..+++.. ......|+||+
T Consensus 22 i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~ 101 (322)
T KOG1164|consen 22 LGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMS 101 (322)
T ss_pred EeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEe
Confidence 34689999999999999554 35899998766433322367888999988863 6899999998 47778899999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCC-----CCeEEeccCccccc
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGND-----MEPKIGDFGLERLV 626 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~-----~~~kL~DFGla~~~ 626 (791)
.+ |.+|.++...... ..++..++.+|+.|++.+|++||+.|++||||||+|++++.. ..+.|.|||+++..
T Consensus 102 l~-G~sL~dl~~~~~~---~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~ 177 (322)
T KOG1164|consen 102 LL-GPSLEDLRKRNPP---GRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRF 177 (322)
T ss_pred cc-CccHHHHHHhCCC---CCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccc
Confidence 88 8899998765542 249999999999999999999999999999999999999865 35899999999833
Q ss_pred C--CCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCC-CCCCCCCCcccCcccccCCCCCCchhhHHHHHHHH
Q 003847 627 T--GDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPS-PSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILL 703 (791)
Q Consensus 627 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ 703 (791)
. ...... .. +... .....||..|.++.+..+...+.+.|+||++.++.
T Consensus 178 ~~~~~~~~~--~~---------------------------~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~ 228 (322)
T KOG1164|consen 178 KYVGDSGGN--LR---------------------------PPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLL 228 (322)
T ss_pred cccCCCCcc--cc---------------------------cCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHH
Confidence 2 111100 00 0011 23456999999999999999999999999999999
Q ss_pred HHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 704 ELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 704 elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
|++.|..||........ ............... ........+.++...+-..+..++|....+...|+..
T Consensus 229 el~~g~LPW~~~~~~~~------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~ 297 (322)
T KOG1164|consen 229 ELLKGSLPWEALEMTDL------KSKFEKDPRKLLTDR--FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDV 297 (322)
T ss_pred HHhcCCCCCccccccch------HHHHHHHhhhhcccc--ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHH
Confidence 99999999854322111 111111111111110 0011223455555556668899999999999887665
No 409
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=2.1e-22 Score=200.61 Aligned_cols=204 Identities=17% Similarity=0.212 Sum_probs=172.5
Q ss_pred hhcceeccccCceEEEEEE-eCCCcEEEEEEcCCCchhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEeccC
Q 003847 477 KASAYILGASGSSIMYKAV-LEDGTALAVRRIGENSVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 477 ~~~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
+..+..||+|.||+++.|+ +-+++.||||.-...+. ..++..|.+..+.| ..++|...|-+..+..+-.+|+|++
T Consensus 30 yrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~--APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL- 106 (449)
T KOG1165|consen 30 YRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE--APQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL- 106 (449)
T ss_pred ceeccccccCcceeeecccccccCceEEEEeccccCC--cchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-
Confidence 3446789999999999999 66899999998765433 25788899988888 4789999988888888889999998
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCC-----CeEEeccCcccccCCC
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDM-----EPKIGDFGLERLVTGD 629 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~-----~~kL~DFGla~~~~~~ 629 (791)
|.+|.|+..-... .++..++..||.|++.-++|+|++.+|.|||||+|+||...+ .+.|+|||+|+.+.+.
T Consensus 107 GPSLEDLFD~CgR----~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp 182 (449)
T KOG1165|consen 107 GPSLEDLFDLCGR----RFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDP 182 (449)
T ss_pred CcCHHHHHHHhcC----cccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCc
Confidence 8999998877665 399999999999999999999999999999999999997543 4899999999988755
Q ss_pred CCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCC
Q 003847 630 TSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~ 709 (791)
...... +.....+..||..||+-....+..-+.+.|+-|+|-++.+.+-|.
T Consensus 183 ~TkqHI-----------------------------PYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGs 233 (449)
T KOG1165|consen 183 KTKQHI-----------------------------PYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGS 233 (449)
T ss_pred cccccC-----------------------------ccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCC
Confidence 443322 233455677999999999999988999999999999999999999
Q ss_pred cchhccc
Q 003847 710 VIVVDEL 716 (791)
Q Consensus 710 ~pf~~~~ 716 (791)
.||.+--
T Consensus 234 LPWQGLK 240 (449)
T KOG1165|consen 234 LPWQGLK 240 (449)
T ss_pred Ccccccc
Confidence 9997743
No 410
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.88 E-value=1.5e-23 Score=239.09 Aligned_cols=257 Identities=19% Similarity=0.211 Sum_probs=187.7
Q ss_pred hcceeccccCceEEEEEEe-CCCcEEEEEEcC----C-Cchhh-HHHHHHHHHHHhccCCCCccceeeEEEccCceEEEE
Q 003847 478 ASAYILGASGSSIMYKAVL-EDGTALAVRRIG----E-NSVDR-FRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIY 550 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~----~-~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 550 (791)
....++|.|++|.|+.+.. .....++.|... . ..... ...+..|+.+-..+.|+|++..+..+.+....+-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 4567999999998887763 334444444432 1 11111 122667787888899999999888887777776679
Q ss_pred eccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCC
Q 003847 551 DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 630 (791)
|||++ +|..++.... .+...++..++.|++.|++|+|+.||.|||+|++|++++.+|.+||+|||.+.....+.
T Consensus 401 E~~~~-Dlf~~~~~~~-----~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~ 474 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSNG-----KLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPW 474 (601)
T ss_pred hcccH-HHHHHHhccc-----ccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCc
Confidence 99999 9999887752 27888999999999999999999999999999999999999999999999987654322
Q ss_pred CCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCC-chhhHHHHHHHHHHHhCC
Q 003847 631 SSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNP-KWDVYSFGVILLELLTGK 709 (791)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~-~sDvwSlGvil~elltG~ 709 (791)
.. ........+|+.+|+|||++.+..|.+ ..||||.|+++..|++|+
T Consensus 475 e~--------------------------------~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~ 522 (601)
T KOG0590|consen 475 EK--------------------------------NIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGR 522 (601)
T ss_pred ch--------------------------------hhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCC
Confidence 21 112344677999999999999999976 689999999999999999
Q ss_pred cchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 710 VIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 710 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
.||...........-.... . -.....+........+.....++.+||+.||.+|.|+++|++.
T Consensus 523 ~~Wk~a~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 523 FPWKVAKKSDNSFKTNNYS--D--QRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred Cccccccccccchhhhccc--c--ccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 9986543322211000000 0 0000111112223345667889999999999999999999864
No 411
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=7.3e-22 Score=188.39 Aligned_cols=200 Identities=18% Similarity=0.252 Sum_probs=164.6
Q ss_pred eeccccCceEEEEEE-eCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccC-CCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 481 YILGASGSSIMYKAV-LEDGTALAVRRIGENSVDRFRDFETQVRVIAKLV-HPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
..||.|+||.+|.|. ..+|+.||||.-..... ..++..|.++.+.|+ ...|..+..+..+.....+|||.+ |.+|
T Consensus 21 rkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL-GPsL 97 (341)
T KOG1163|consen 21 RKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL-GPSL 97 (341)
T ss_pred EeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc-CccH
Confidence 579999999999999 67899999998765433 256778899999886 467888888888889999999998 8999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecC---CCCeEEeccCcccccCCCCCCCcC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN---DMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~---~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
.++..-... .++..+++.++-|++.-++|+|.+++|||||||+|+|+.- ...+.++|||+|+...+.......
T Consensus 98 EdLfnfC~R----~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HI 173 (341)
T KOG1163|consen 98 EDLFNFCSR----RFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHI 173 (341)
T ss_pred HHHHHHHhh----hhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhccccccccC
Confidence 998765543 3899999999999999999999999999999999999963 356899999999987643322211
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
+...-....||..|.+-....+...+.+.|+-|+|.++....-|..||.+-
T Consensus 174 -----------------------------pyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQgl 224 (341)
T KOG1163|consen 174 -----------------------------PYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGL 224 (341)
T ss_pred -----------------------------ccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCccccc
Confidence 122334566999999988777777788999999999999999999999774
Q ss_pred c
Q 003847 716 L 716 (791)
Q Consensus 716 ~ 716 (791)
.
T Consensus 225 k 225 (341)
T KOG1163|consen 225 K 225 (341)
T ss_pred c
Confidence 3
No 412
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.87 E-value=1.1e-22 Score=196.68 Aligned_cols=242 Identities=24% Similarity=0.338 Sum_probs=184.5
Q ss_pred eccccCceEEEEEEeCCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCChh
Q 003847 482 ILGASGSSIMYKAVLEDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLA 559 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 559 (791)
.|.+...|..|+|+++ |..+++|++.-. .....++|..|.-.|+-+.||||+.+++.|..+.+..++..||+.|+|+
T Consensus 197 kl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gsly 275 (448)
T KOG0195|consen 197 KLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLY 275 (448)
T ss_pred hhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHHH
Confidence 5777889999999986 556677877543 3344578999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-C-CeecCCCCCCeEecCCCCeEEe--ccCcccccCCCCCCCcC
Q 003847 560 NARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK-K-HVHGNLKPRNVLLGNDMEPKIG--DFGLERLVTGDTSSSKA 635 (791)
Q Consensus 560 ~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~-~-ivHrDlkp~NILl~~~~~~kL~--DFGla~~~~~~~~~~~~ 635 (791)
+.+++...- ..+..++.+++.+|++|++|||+. . |..--|.+..+++|++.+++|+ |--++.
T Consensus 276 nvlhe~t~v---vvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsf----------- 341 (448)
T KOG0195|consen 276 NVLHEQTSV---VVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSF----------- 341 (448)
T ss_pred HHHhcCccE---EEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeee-----------
Confidence 999986542 367788999999999999999993 3 4455688999999999887764 221111
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCC---CCchhhHHHHHHHHHHHhCCcch
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKP---NPKWDVYSFGVILLELLTGKVIV 712 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~---~~~sDvwSlGvil~elltG~~pf 712 (791)
|.. ...-.+.||+||.+...+- -.++|+|||.+++||+.|...||
T Consensus 342 -------------------qe~-------------gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpf 389 (448)
T KOG0195|consen 342 -------------------QEV-------------GRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPF 389 (448)
T ss_pred -------------------ecc-------------ccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhcccccc
Confidence 111 1113566999999976543 35799999999999999999999
Q ss_pred hccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 713 VDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
.+-......+. +.-..++...+ ......+.+++.-|++.||.+||.++.|+-.||++.
T Consensus 390 adlspmecgmk---------ialeglrv~ip--pgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 390 ADLSPMECGMK---------IALEGLRVHIP--PGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred ccCCchhhhhh---------hhhccccccCC--CCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 77543322221 11122222222 225567788999999999999999999999998864
No 413
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.87 E-value=1e-20 Score=203.68 Aligned_cols=257 Identities=24% Similarity=0.318 Sum_probs=193.0
Q ss_pred ceeccccCceEEEEEEeCCCcEEEEEEcCCCchh---hHHHHHHHHHHHhccCCC-CccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVLEDGTALAVRRIGENSVD---RFRDFETQVRVIAKLVHP-NLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~H~-nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
...||.|+|+.||++... ..+++|.+...... ....+.+|+.+++.+.|+ +|+++++++......+++++|+.+
T Consensus 5 ~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 82 (384)
T COG0515 5 LRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDG 82 (384)
T ss_pred EEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCCC
Confidence 457899999999999976 88999999765332 367899999999999988 799999999777778999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCC-CeEEeccCcccccCCCCCCCc
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDM-EPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~-~~kL~DFGla~~~~~~~~~~~ 634 (791)
+++.+++...... ..+.......++.|++.+++|+|+.+++|||+||+||+++..+ .++++|||.++..........
T Consensus 83 ~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (384)
T COG0515 83 GSLEDLLKKIGRK--GPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSS 160 (384)
T ss_pred CcHHHHHHhcccc--cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcccc
Confidence 9999766554311 1388899999999999999999999999999999999999988 799999999985543221110
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC---CCCCCchhhHHHHHHHHHHHhCCcc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS---IKPNPKWDVYSFGVILLELLTGKVI 711 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~---~~~~~~sDvwSlGvil~elltG~~p 711 (791)
.. .......||..|+|||.+.+ ..++...|+||+|++++++++|..|
T Consensus 161 ~~------------------------------~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p 210 (384)
T COG0515 161 IP------------------------------ALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPP 210 (384)
T ss_pred cc------------------------------ccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCC
Confidence 00 12234569999999999987 5789999999999999999999999
Q ss_pred hhccccCCCCcchhchhHHHHHHHHhhhc--CccchH----HHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 712 VVDELGQGNGLLVEDKNRAIRLADAAIRA--DFEGKE----EALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 712 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
|...... ................ ...... .....+.+++..|+..+|..|.++.+....
T Consensus 211 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 211 FEGEKNS------SATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred CCCCCcc------ccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 6443211 0001111111111111 000110 112467889999999999999998887664
No 414
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.85 E-value=1.9e-21 Score=191.64 Aligned_cols=139 Identities=16% Similarity=0.180 Sum_probs=109.2
Q ss_pred eeccccCceEEEEEEeCCCcEEEEEEcCCCchh--h------------------------HHHHHHHHHHHhccCCCCcc
Q 003847 481 YILGASGSSIMYKAVLEDGTALAVRRIGENSVD--R------------------------FRDFETQVRVIAKLVHPNLV 534 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~--~------------------------~~~~~~E~~~l~~l~H~nIv 534 (791)
..||+|++|.||+|...+|+.||||+++..... . ....+.|++++.++.++++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~ 82 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIP 82 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 479999999999999878999999999654211 0 01224599999999888775
Q ss_pred ceeeEEEccCceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHH-hcCCCeecCCCCCCeEecCCC
Q 003847 535 RIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFL-HEKKHVHGNLKPRNVLLGNDM 613 (791)
Q Consensus 535 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yL-H~~~ivHrDlkp~NILl~~~~ 613 (791)
....+.. ...++||||++++++........ .+++.++..++.|++.+|+|+ |+.||+||||||+|||++ ++
T Consensus 83 ~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~~-----~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~ 154 (190)
T cd05147 83 CPEPILL--KSHVLVMEFIGDDGWAAPRLKDA-----PLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DG 154 (190)
T ss_pred CCcEEEe--cCCEEEEEEeCCCCCcchhhhcC-----CCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CC
Confidence 4443322 23489999999887765432221 388999999999999999999 689999999999999998 47
Q ss_pred CeEEeccCcccccC
Q 003847 614 EPKIGDFGLERLVT 627 (791)
Q Consensus 614 ~~kL~DFGla~~~~ 627 (791)
.++|+|||+|....
T Consensus 155 ~v~LiDFG~a~~~~ 168 (190)
T cd05147 155 KLYIIDVSQSVEHD 168 (190)
T ss_pred cEEEEEccccccCC
Confidence 89999999998654
No 415
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.85 E-value=4.6e-22 Score=224.86 Aligned_cols=250 Identities=19% Similarity=0.167 Sum_probs=177.1
Q ss_pred cceeccccCceEEEEEEeCCCcEEEEEEcCCCc-hhhHHHHHHHHHH--HhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 479 SAYILGASGSSIMYKAVLEDGTALAVRRIGENS-VDRFRDFETQVRV--IAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~--l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
..+.||.+.|=+|.+|+.+.|. |+||++-+.. .-..+.|.++++- ...++|||++++.-+-..+...|+|-+|+.
T Consensus 27 ~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqyvk- 104 (1431)
T KOG1240|consen 27 YVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQYVK- 104 (1431)
T ss_pred eecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHHHh-
Confidence 4568999999999999988887 8999985542 2223344433333 445689999999888777788899999994
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
-+|+|.+..+. .+...+.+-|+.|++.||..+|+.||+|||||.+|||++.-..+.|+||..-+..--..+....
T Consensus 105 hnLyDRlSTRP-----FL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPad 179 (1431)
T KOG1240|consen 105 HNLYDRLSTRP-----FLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPAD 179 (1431)
T ss_pred hhhhhhhccch-----HHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCccc
Confidence 58988876654 3778888999999999999999999999999999999999999999999876532211111110
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC----------C-CCCchhhHHHHHHHHH
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI----------K-PNPKWDVYSFGVILLE 704 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~----------~-~~~~sDvwSlGvil~e 704 (791)
+.+-+.+. ..-.+|.|||.+... . .+++.||||+||+++|
T Consensus 180 -----------------------f~fFFDTS------rRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaE 230 (1431)
T KOG1240|consen 180 -----------------------FTFFFDTS------RRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAE 230 (1431)
T ss_pred -----------------------ceEEEecC------CceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHH
Confidence 00001111 122459999988431 1 5789999999999999
Q ss_pred HHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccch----HHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhcc
Q 003847 705 LLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGK----EEALLSCFKLGYSCASPLPQKRPSMKEALQALEK 779 (791)
Q Consensus 705 llt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~ 779 (791)
|++ |+++|.-. +++..+-.+..... .-+...+.+++..|++.||++|.++++.|+.-..
T Consensus 231 Lf~Eg~PlF~LS----------------QL~aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG 294 (1431)
T KOG1240|consen 231 LFLEGRPLFTLS----------------QLLAYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQKYRG 294 (1431)
T ss_pred HHhcCCCcccHH----------------HHHhHhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence 988 57777432 11111111100000 0012357789999999999999999999998554
Q ss_pred C
Q 003847 780 I 780 (791)
Q Consensus 780 i 780 (791)
+
T Consensus 295 ~ 295 (1431)
T KOG1240|consen 295 L 295 (1431)
T ss_pred c
Confidence 3
No 416
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.84 E-value=6.7e-21 Score=189.50 Aligned_cols=133 Identities=11% Similarity=0.181 Sum_probs=109.1
Q ss_pred cceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHH---H------HHHHHHHHhccCCCCccceeeEEEcc------
Q 003847 479 SAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFR---D------FETQVRVIAKLVHPNLVRIRGFYWGV------ 543 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~---~------~~~E~~~l~~l~H~nIv~l~~~~~~~------ 543 (791)
..+++|.|+||.||.+.. ++..+|||.+........+ . +++|++.+.++.|++|..+.+++...
T Consensus 35 ~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~ 113 (232)
T PRK10359 35 TIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLR 113 (232)
T ss_pred EEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeeccccccc
Confidence 357999999999999766 5778999999764332222 2 68999999999999999999987643
Q ss_pred --CceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccC
Q 003847 544 --DEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFG 621 (791)
Q Consensus 544 --~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFG 621 (791)
+..++||||++|.+|.++.. ++. ....+++.+|..+|+.|++|||+||+||+++.++ ++|+|||
T Consensus 114 ~~~~~~lvmEyi~G~tL~~~~~---------~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liDfg 179 (232)
T PRK10359 114 YAHTYIMLIEYIEGVELNDMPE---------ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIIDLS 179 (232)
T ss_pred ccCCeEEEEEEECCccHHHhhh---------ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEECC
Confidence 35789999999999987621 333 2456999999999999999999999999999988 9999999
Q ss_pred ccccc
Q 003847 622 LERLV 626 (791)
Q Consensus 622 la~~~ 626 (791)
.....
T Consensus 180 ~~~~~ 184 (232)
T PRK10359 180 GKRCT 184 (232)
T ss_pred Ccccc
Confidence 87654
No 417
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.84 E-value=2.2e-22 Score=213.29 Aligned_cols=200 Identities=25% Similarity=0.233 Sum_probs=142.6
Q ss_pred cCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCC
Q 003847 88 LPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAG 167 (791)
Q Consensus 88 L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 167 (791)
|..|++...-.+.|-.|.++++|+|+.|++...-.+.+.+|+.|+.||||+|.|..+-++.+.-.++|++|+|++|+|+.
T Consensus 252 lqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~ 331 (873)
T KOG4194|consen 252 LQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITR 331 (873)
T ss_pred hhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEecccccccc
Confidence 33344433334445555555566666666655555556666666666666666665556666666666666666666665
Q ss_pred CCccccCCCCCCCEEeCCCCcCCCCCCCC---CcccceeccccccccccCCCCcC---C-ccccEEEccCCcCcccCchh
Q 003847 168 KLPVSLTTLQSLTIVSLKNNYFSDGLPSK---FNSVQVLDLSSNLINGSLPPDIG---G-YSLRYLNLSYNRLSGEIPPQ 240 (791)
Q Consensus 168 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~---l~~L~~L~ls~N~l~~~~p~~~~---~-~~L~~L~l~~N~l~g~ip~~ 240 (791)
..+..|..|..|++|+|++|.+....-.. +++|+.|||++|.|++.+.+.-. + .+|+.|+|.+|+|. .||..
T Consensus 332 l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk-~I~kr 410 (873)
T KOG4194|consen 332 LDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLK-SIPKR 410 (873)
T ss_pred CChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceee-ecchh
Confidence 55666666666666666666655433222 37899999999999987776432 2 48999999999999 99999
Q ss_pred HhhcCCCCcEEEcccCcCcccCCCCCcccccccccccCCCCCCCCCCC
Q 003847 241 FGEKIPVNATIDLSFNNLTGEIPESNVFMNQESSSFSGNLDLCGQPTK 288 (791)
Q Consensus 241 ~~~~l~~l~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~ 288 (791)
.+..+++|+.|||.+|.+...-|....-+++..+.+.....+|+|.+.
T Consensus 411 Afsgl~~LE~LdL~~NaiaSIq~nAFe~m~Lk~Lv~nSssflCDCql~ 458 (873)
T KOG4194|consen 411 AFSGLEALEHLDLGDNAIASIQPNAFEPMELKELVMNSSSFLCDCQLK 458 (873)
T ss_pred hhccCcccceecCCCCcceeecccccccchhhhhhhcccceEEeccHH
Confidence 888899999999999999999998888889999999999999999865
No 418
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.83 E-value=3e-20 Score=183.83 Aligned_cols=140 Identities=19% Similarity=0.254 Sum_probs=111.8
Q ss_pred eeccccCceEEEEEEeCCCcEEEEEEcCCCchh--------------------------hHHHHHHHHHHHhccCCCCcc
Q 003847 481 YILGASGSSIMYKAVLEDGTALAVRRIGENSVD--------------------------RFRDFETQVRVIAKLVHPNLV 534 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~--------------------------~~~~~~~E~~~l~~l~H~nIv 534 (791)
..||+|++|.||+|...+|+.||||++...... ....++.|.+.+.++.|++|.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 82 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVP 82 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 479999999999999778999999998754210 012246789999999999886
Q ss_pred ceeeEEEccCceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCeecCCCCCCeEecCCC
Q 003847 535 RIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE-KKHVHGNLKPRNVLLGNDM 613 (791)
Q Consensus 535 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~ivHrDlkp~NILl~~~~ 613 (791)
....+... ..++||||++++++........ .++..+...++.|++.++.++|+ .||+||||||+||+++ ++
T Consensus 83 ~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~~-----~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~ 154 (190)
T cd05145 83 VPEPILLK--KNVLVMEFIGDDGSPAPRLKDV-----PLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DG 154 (190)
T ss_pred CceEEEec--CCEEEEEEecCCCchhhhhhhc-----cCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CC
Confidence 55544433 3489999999886544322221 37888999999999999999999 9999999999999999 88
Q ss_pred CeEEeccCcccccCC
Q 003847 614 EPKIGDFGLERLVTG 628 (791)
Q Consensus 614 ~~kL~DFGla~~~~~ 628 (791)
.++|+|||++..+..
T Consensus 155 ~~~liDFG~a~~~~~ 169 (190)
T cd05145 155 KPYIIDVSQAVELDH 169 (190)
T ss_pred CEEEEEcccceecCC
Confidence 999999999987654
No 419
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.83 E-value=7.1e-21 Score=194.95 Aligned_cols=230 Identities=20% Similarity=0.218 Sum_probs=147.6
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCC---CchhhHHHHHHHHHHHhccCC----------CCccceeeEEEcc--
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGE---NSVDRFRDFETQVRVIAKLVH----------PNLVRIRGFYWGV-- 543 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~---~~~~~~~~~~~E~~~l~~l~H----------~nIv~l~~~~~~~-- 543 (791)
+.+||.|+++.||.++. ++|+.+|||++.. ......+++++|.-....+.+ -.++..++.....
T Consensus 17 ~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~ 96 (288)
T PF14531_consen 17 GRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGK 96 (288)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS
T ss_pred ccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCC
Confidence 56899999999999995 5699999998743 233456777777755555432 2333333332211
Q ss_pred -------C--------ceEEEEeccCCCChhHHHHh---hcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCC
Q 003847 544 -------D--------EKLIIYDFVPNGSLANARYR---KMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPR 605 (791)
Q Consensus 544 -------~--------~~~lv~e~~~~gsL~~~l~~---~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~ 605 (791)
. ..+++|+-+ .++|.+++.. .... ...+....+..+..|+++.+++||+.|+||+||||+
T Consensus 97 ~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~-~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~~ 174 (288)
T PF14531_consen 97 PPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQT-HSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIKPE 174 (288)
T ss_dssp -SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTT-SHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-SGG
T ss_pred CcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccc-cchhHHHHHHHHHHHHHHHHHHHhhcceEeccccee
Confidence 1 236788887 5688887553 2211 112444566778899999999999999999999999
Q ss_pred CeEecCCCCeEEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc
Q 003847 606 NVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR 685 (791)
Q Consensus 606 NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~ 685 (791)
|++++++|.++|+||+.....+..... ...+..|.+||...
T Consensus 175 nfll~~~G~v~Lg~F~~~~r~g~~~~~---------------------------------------~~~~~~~~PPe~~~ 215 (288)
T PF14531_consen 175 NFLLDQDGGVFLGDFSSLVRAGTRYRC---------------------------------------SEFPVAFTPPELES 215 (288)
T ss_dssp GEEE-TTS-EEE--GGGEEETTEEEEG---------------------------------------GGS-TTTS-HHHHH
T ss_pred eEEEcCCCCEEEcChHHHeecCceeec---------------------------------------cCCCcccCChhhhh
Confidence 999999999999999887655421110 01345689999874
Q ss_pred C--------CCCCCchhhHHHHHHHHHHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHh
Q 003847 686 S--------IKPNPKWDVYSFGVILLELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGY 757 (791)
Q Consensus 686 ~--------~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 757 (791)
. ..++.+.|.|++|+++|.|++|+.||........... .+....+.+..+.+||.
T Consensus 216 ~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~-----------------~f~~C~~~Pe~v~~LI~ 278 (288)
T PF14531_consen 216 CAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW-----------------DFSRCRDMPEPVQFLIR 278 (288)
T ss_dssp HHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG-----------------GGTTSS---HHHHHHHH
T ss_pred hhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc-----------------cchhcCCcCHHHHHHHH
Confidence 3 3478899999999999999999999965432221111 11111246778899999
Q ss_pred hccCCCCCCC
Q 003847 758 SCASPLPQKR 767 (791)
Q Consensus 758 ~cl~~dP~~R 767 (791)
.+|+.+|.+|
T Consensus 279 ~lL~~~~~~R 288 (288)
T PF14531_consen 279 GLLQRNPEDR 288 (288)
T ss_dssp HHT-SSGGGS
T ss_pred HHccCCcccC
Confidence 9999999988
No 420
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.82 E-value=1.6e-19 Score=175.61 Aligned_cols=196 Identities=15% Similarity=0.101 Sum_probs=139.2
Q ss_pred ceeccccCceEEEEEEeCCCcEEEEEEcCCCchhh----HHHHHHHHHHHhccC-CCCccceeeEEEccCceEEEEeccC
Q 003847 480 AYILGASGSSIMYKAVLEDGTALAVRRIGENSVDR----FRDFETQVRVIAKLV-HPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~----~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
...|++|+||+||.+.. .+++++.+.+.....-. ...+++|+++|++|. |++|++++++ +..+++|||+.
T Consensus 7 ~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~ 81 (218)
T PRK12274 7 NEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLA 81 (218)
T ss_pred ceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeec
Confidence 46899999999997766 68889888887653311 225889999999995 5889999886 45799999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCC-CCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNL-KPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDl-kp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
|.+|.+.... . ...++.|++.+|+++|+.||+|||| ||+|||++.++.++|+|||++..........
T Consensus 82 G~~L~~~~~~-----------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~ 149 (218)
T PRK12274 82 GAAMYQRPPR-----------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWM 149 (218)
T ss_pred CccHHhhhhh-----------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHH
Confidence 9998643211 1 1357889999999999999999999 7999999999999999999998544221100
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC-CCC-CchhhHHHHHHHHHHHhCCcc
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI-KPN-PKWDVYSFGVILLELLTGKVI 711 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~-~~sDvwSlGvil~elltG~~p 711 (791)
.. ...++- ..........++.|++|+...-. ..+ ...+.++.|.-+|.++|++.+
T Consensus 150 r~------------L~~rDl-----------~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~ 206 (218)
T PRK12274 150 RL------------LAREDL-----------RHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVL 206 (218)
T ss_pred HH------------HHHHHH-----------HHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCC
Confidence 00 000000 00000001156678888765432 233 567888999999999999997
Q ss_pred hhcc
Q 003847 712 VVDE 715 (791)
Q Consensus 712 f~~~ 715 (791)
+..+
T Consensus 207 ~~~~ 210 (218)
T PRK12274 207 HWED 210 (218)
T ss_pred cccc
Confidence 6443
No 421
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.81 E-value=3.5e-21 Score=208.61 Aligned_cols=225 Identities=21% Similarity=0.241 Sum_probs=182.0
Q ss_pred eccccCceEEEEEE----eCCCcEEEEEEcCCCchhh--HHHHHHHHHHHhccC-CCCccceeeEEEccCceEEEEeccC
Q 003847 482 ILGASGSSIMYKAV----LEDGTALAVRRIGENSVDR--FRDFETQVRVIAKLV-HPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~----~~~g~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
++|+|.||.|+.++ .+.|..+|.|++++..... ......|..++..++ ||.+|++.-.++.+...+++++|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 47999999999886 3447889999886642211 114556777888886 9999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
+|.|...+.... .+.+.....+...++-|++++|+.+|+|||+|++||+++.+|.+|+.|||+++..-...
T Consensus 81 gg~lft~l~~~~-----~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~---- 151 (612)
T KOG0603|consen 81 GGDLFTRLSKEV-----MFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK---- 151 (612)
T ss_pred cchhhhccccCC-----chHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhh----
Confidence 999987665543 27778888899999999999999999999999999999999999999999998653211
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
..|||..|||||++. ....++|.||||++++||+||..||..
T Consensus 152 ------------------------------------~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 152 ------------------------------------IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred ------------------------------------hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 127999999999998 467899999999999999999999954
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSM 770 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 770 (791)
+.....+......+.+......+++..++..+|..|.-.
T Consensus 194 -----------------~~~~~Il~~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 194 -----------------DTMKRILKAELEMPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred -----------------HHHHHHhhhccCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 222333333445556677778889999999999999644
No 422
>PRK10345 hypothetical protein; Provisional
Probab=99.81 E-value=2.1e-19 Score=178.63 Aligned_cols=136 Identities=18% Similarity=0.192 Sum_probs=107.0
Q ss_pred cceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhcc-----CCCCccceeeEEEccC---ceE-EE
Q 003847 479 SAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKL-----VHPNLVRIRGFYWGVD---EKL-II 549 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~H~nIv~l~~~~~~~~---~~~-lv 549 (791)
...+||+|+||.||. .-+++.. +||++........+.+.+|+++++++ +||||++++|+++++. ..+ +|
T Consensus 6 ~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I 83 (210)
T PRK10345 6 EQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI 83 (210)
T ss_pred CcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence 356899999999996 3234444 79998765444567899999999999 5799999999998874 333 78
Q ss_pred Eec--cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHH-HHHhcCCCeecCCCCCCeEecC----CCCeEEeccCc
Q 003847 550 YDF--VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGL-AFLHEKKHVHGNLKPRNVLLGN----DMEPKIGDFGL 622 (791)
Q Consensus 550 ~e~--~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL-~yLH~~~ivHrDlkp~NILl~~----~~~~kL~DFGl 622 (791)
+|| +.+++|.+++.+.. +++. ..++.|++.++ +|||+++|+||||||+|||++. ++.++|+||+.
T Consensus 84 ~e~~G~~~~tL~~~l~~~~------~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G 155 (210)
T PRK10345 84 ADFDGKPSITLTEFAEQCR------YEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIG 155 (210)
T ss_pred ecCCCCcchhHHHHHHccc------ccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCC
Confidence 999 55799999996532 5555 35678888888 9999999999999999999974 34799999544
Q ss_pred cc
Q 003847 623 ER 624 (791)
Q Consensus 623 a~ 624 (791)
+.
T Consensus 156 ~~ 157 (210)
T PRK10345 156 ES 157 (210)
T ss_pred Cc
Confidence 43
No 423
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.80 E-value=4.4e-21 Score=203.52 Aligned_cols=211 Identities=23% Similarity=0.203 Sum_probs=134.7
Q ss_pred eeeCCCCCCCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccc
Q 003847 69 VTCASPGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPET 148 (791)
Q Consensus 69 v~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 148 (791)
|+-...+.|+++..+..|.|+.|+++...+..|.+|++|+.|+|..|+|.-.---.|.+|++|+.|.|..|.|+..-...
T Consensus 185 It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~ 264 (873)
T KOG4194|consen 185 ITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGA 264 (873)
T ss_pred ccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcc
Confidence 33333444555555555555555555444445555555555555555555322334555555555555555555444555
Q ss_pred cCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC---cccceeccccccccccCCCCcCCc-ccc
Q 003847 149 MGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLINGSLPPDIGGY-SLR 224 (791)
Q Consensus 149 ~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~~~~~-~L~ 224 (791)
|-.|.++++|+|+.|+++..-.+++.+|++|+.|+|++|.|..+-++.+ .+|++|+||+|+|+...+.+|..+ .|+
T Consensus 265 Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le 344 (873)
T KOG4194|consen 265 FYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLE 344 (873)
T ss_pred eeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhh
Confidence 6666667777777777776666677777777777777777777666654 578888888888876666666553 678
Q ss_pred EEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCC----CcccccccccccCCC
Q 003847 225 YLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPES----NVFMNQESSSFSGNL 280 (791)
Q Consensus 225 ~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~----~~~~~~~~~~~~~n~ 280 (791)
+|+|++|+++ .+-+..+..+.+|+.|||+.|.|+..|.+. ..+..+..+.+.||.
T Consensus 345 ~LnLs~Nsi~-~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNq 403 (873)
T KOG4194|consen 345 ELNLSHNSID-HLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQ 403 (873)
T ss_pred hhcccccchH-HHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCce
Confidence 8888888887 677777777888888888888888777654 234455556666664
No 424
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.79 E-value=1.7e-19 Score=196.20 Aligned_cols=216 Identities=26% Similarity=0.360 Sum_probs=162.7
Q ss_pred HhccCCCCccceeeEEEccCceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-eecCCC
Q 003847 525 IAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKH-VHGNLK 603 (791)
Q Consensus 525 l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~i-vHrDlk 603 (791)
|+.+.|.|+.+++|.+.+....++|.+||..|+|.|.+..... .+++.-...++++|+.||+|||...| .|+.++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~----~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~ 76 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDI----KLDYFFILSFIRDISKGLAYLHNSPIGYHGALK 76 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcccc----CccHHHHHHHHHHHHHHHHHHhcCcceeeeeec
Confidence 4678999999999999999999999999999999999887432 48999999999999999999999766 999999
Q ss_pred CCCeEecCCCCeEEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccc
Q 003847 604 PRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPES 683 (791)
Q Consensus 604 p~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~ 683 (791)
+.|.++|....+||+|||+............ .....-..-|.|||.
T Consensus 77 s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~----------------------------------~~~~~~~~lw~aPel 122 (484)
T KOG1023|consen 77 SSNCLVDSRWVLKLTDFGLNSLLEETAEPEA----------------------------------HHPIRKALLWTAPEL 122 (484)
T ss_pred cccceeeeeEEEEechhhhcccccccccccc----------------------------------cchhHHHHhccCHHH
Confidence 9999999999999999999876643100000 000012344999999
Q ss_pred ccCC-------CCCCchhhHHHHHHHHHHHhCCcchhccccCCCCcchhchhHHHHHHH---HhhhcCccchHHHHHHHH
Q 003847 684 LRSI-------KPNPKWDVYSFGVILLELLTGKVIVVDELGQGNGLLVEDKNRAIRLAD---AAIRADFEGKEEALLSCF 753 (791)
Q Consensus 684 ~~~~-------~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~ 753 (791)
+.+. ..+.+.||||||++++|+++.+.||......... .+....+.+ ...++......+....+.
T Consensus 123 lr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~-----~eii~~~~~~~~~~~rP~i~~~~e~~~~l~ 197 (484)
T KOG1023|consen 123 LRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDP-----DEIILRVKKGGSNPFRPSIELLNELPPELL 197 (484)
T ss_pred hcccccccccccccccCCeehHHHHHHHHHhccCccccccccCCh-----HHHHHHHHhcCCCCcCcchhhhhhcchHHH
Confidence 9763 1467899999999999999999999764322211 111111111 112222221223445789
Q ss_pred HHHhhccCCCCCCCCCHHHHHHHhccCCCC
Q 003847 754 KLGYSCASPLPQKRPSMKEALQALEKIPSS 783 (791)
Q Consensus 754 ~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 783 (791)
.++.+||..+|++||++++|-..++.+...
T Consensus 198 ~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 198 LLVARCWEEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred HHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence 999999999999999999999999887654
No 425
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.79 E-value=2.3e-19 Score=208.16 Aligned_cols=203 Identities=16% Similarity=0.181 Sum_probs=159.5
Q ss_pred CcccchHHHhhhcceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccC---CCCccceeeEEEcc
Q 003847 467 DKELELETLLKASAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLV---HPNLVRIRGFYWGV 543 (791)
Q Consensus 467 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~ 543 (791)
...+++....+.....||+|+||+||+|...+|+.||+|+-+....- +|---.+++.+|+ -+-|+.+...+...
T Consensus 690 ~~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~ 766 (974)
T KOG1166|consen 690 NTEFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQ 766 (974)
T ss_pred cceeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccC
Confidence 34455555555667889999999999999888999999997664332 1111223444444 34566666667778
Q ss_pred CceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEec-------CCCCeE
Q 003847 544 DEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLG-------NDMEPK 616 (791)
Q Consensus 544 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~-------~~~~~k 616 (791)
+..++|+||.+.|+|.+++.... .++|..+..++.|++..+++||..+|||+||||+|+||. ....++
T Consensus 767 ~~S~lv~ey~~~Gtlld~~N~~~-----~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~ 841 (974)
T KOG1166|consen 767 NASVLVSEYSPYGTLLDLINTNK-----VMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLY 841 (974)
T ss_pred CcceeeeeccccccHHHhhccCC-----CCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceE
Confidence 88899999999999999988433 399999999999999999999999999999999999994 234589
Q ss_pred EeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhH
Q 003847 617 IGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVY 696 (791)
Q Consensus 617 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvw 696 (791)
|+|||.+-.+.--. ..+.....++|-.+-.+|+..+..++..+|.|
T Consensus 842 lIDfG~siDm~lfp----------------------------------~~~~F~~~~~td~f~C~EM~~grpWtYq~Dyf 887 (974)
T KOG1166|consen 842 LIDFGRSIDMKLFP----------------------------------DGTKFKAVWHTDLFDCIEMREGRPWTYQIDYF 887 (974)
T ss_pred EEecccceeeeEcC----------------------------------CCcEEeeeeccccchhHHHhcCCCCchhhhhH
Confidence 99999987654211 11223455688889999999999999999999
Q ss_pred HHHHHHHHHHhCCcc
Q 003847 697 SFGVILLELLTGKVI 711 (791)
Q Consensus 697 SlGvil~elltG~~p 711 (791)
.++.+++-|+.|+..
T Consensus 888 GlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 888 GLAATVHVMLFGKYM 902 (974)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999874
No 426
>PLN03150 hypothetical protein; Provisional
Probab=99.79 E-value=1.5e-18 Score=201.24 Aligned_cols=135 Identities=37% Similarity=0.613 Sum_probs=82.1
Q ss_pred CCChhhHHHHHHHHhhccCCCCCccCCCCCCCCCCc-----eeeeeeeCCCCCCCCCCcEEEEEcCCCCCccCCCcCCCC
Q 003847 29 LGLNTDGVLLLSFKYSVLSDPLGVLGSWNYNDENPC-----SWNGVTCASPGEGNNDSRVIGLALPNSQLLGSIPADLGM 103 (791)
Q Consensus 29 ~~~~~~~~~ll~~k~~~~~~~~~~l~sw~~~~~~~c-----~w~gv~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~~~~ 103 (791)
.....|..+|+.+|..+. ++.. .+|+. +|| .|.||.|..... .....|+.|+|++|++.|.+|..|+.
T Consensus 368 ~t~~~~~~aL~~~k~~~~-~~~~--~~W~g---~~C~p~~~~w~Gv~C~~~~~-~~~~~v~~L~L~~n~L~g~ip~~i~~ 440 (623)
T PLN03150 368 KTLLEEVSALQTLKSSLG-LPLR--FGWNG---DPCVPQQHPWSGADCQFDST-KGKWFIDGLGLDNQGLRGFIPNDISK 440 (623)
T ss_pred ccCchHHHHHHHHHHhcC-Cccc--CCCCC---CCCCCcccccccceeeccCC-CCceEEEEEECCCCCccccCCHHHhC
Confidence 456678999999999873 4432 48963 455 799999962111 11224677777777776666666666
Q ss_pred CCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCCc
Q 003847 104 IEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLP 170 (791)
Q Consensus 104 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 170 (791)
|++|+.|+|++|+|.|.+|..+.++++|+.|+|++|+|+|.+|+.+++|++|+.|+|++|+|+|.+|
T Consensus 441 L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP 507 (623)
T PLN03150 441 LRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVP 507 (623)
T ss_pred CCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCC
Confidence 6666666666666666555555555555555555555555555555555555555444444444333
No 427
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.76 E-value=2.7e-18 Score=175.05 Aligned_cols=201 Identities=19% Similarity=0.230 Sum_probs=138.8
Q ss_pred CCCCccceeeEEEcc---------------------------CceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHH
Q 003847 529 VHPNLVRIRGFYWGV---------------------------DEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKI 581 (791)
Q Consensus 529 ~H~nIv~l~~~~~~~---------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i 581 (791)
+|||||++.++|.+. ...|+||.-++ .+|.+++..+. .+......|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~------~s~r~~~~~ 346 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRH------RSYRTGRVI 346 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCC------CchHHHHHH
Confidence 599999999887531 24689999884 58999887654 566677889
Q ss_pred HHHHHHHHHHHhcCCCeecCCCCCCeEe--cCCC--CeEEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCC
Q 003847 582 AKGVARGLAFLHEKKHVHGNLKPRNVLL--GNDM--EPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDL 657 (791)
Q Consensus 582 ~~qi~~gL~yLH~~~ivHrDlkp~NILl--~~~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (791)
+.|+++|+.|||++||.|||+|++|||+ |+|+ .+.|+|||++---..-.-... +.
T Consensus 347 laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlp-------y~-------------- 405 (598)
T KOG4158|consen 347 LAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLP-------YE-------------- 405 (598)
T ss_pred HHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccc-------cc--------------
Confidence 9999999999999999999999999998 4444 368999998753221000000 00
Q ss_pred CCCCCCCCCCCCCCCCCCCcccCcccccCCC-----C-CCchhhHHHHHHHHHHHhCCcchhccccCCCCcchhchhHHH
Q 003847 658 GPGPSPSPSPSPSSLGGISPYHAPESLRSIK-----P-NPKWDVYSFGVILLELLTGKVIVVDELGQGNGLLVEDKNRAI 731 (791)
Q Consensus 658 ~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~-----~-~~~sDvwSlGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~ 731 (791)
...-...|...-||||+....+ . -.|+|.|+.|.+.||++....||+..-.. .+ +...
T Consensus 406 ---------S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem----~L-~~r~-- 469 (598)
T KOG4158|consen 406 ---------SDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEM----LL-DTRT-- 469 (598)
T ss_pred ---------cccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchh----ee-chhh--
Confidence 0011234777899999986432 1 24899999999999999999999763111 11 1111
Q ss_pred HHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHh
Q 003847 732 RLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQAL 777 (791)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 777 (791)
+.....+. .++..+..+.+++...++.||.+|++..-....|
T Consensus 470 --Yqe~qLPa--lp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 470 --YQESQLPA--LPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred --hhhhhCCC--CcccCChHHHHHHHHHhcCCccccCCccHHHhHH
Confidence 11111111 1223556788999999999999999876555544
No 428
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.75 E-value=4.1e-20 Score=197.03 Aligned_cols=196 Identities=30% Similarity=0.365 Sum_probs=148.8
Q ss_pred CCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEE
Q 003847 79 NDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLL 158 (791)
Q Consensus 79 ~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 158 (791)
.+..++.|||++|+|. ..|..+..-.++-.|+||+|+|..+...-|.+|+.|-+||||+|+|. .+|..+.+|.+|+.|
T Consensus 101 ~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL 178 (1255)
T KOG0444|consen 101 RLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTL 178 (1255)
T ss_pred ccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhh
Confidence 4567888888888886 56777777888888888888888544455678888888888888887 777778888888888
Q ss_pred eCcCCcCC-------------------------CCCccccCCCCCCCEEeCCCCcCCCCCCCCC---cccceeccccccc
Q 003847 159 NLSDNALA-------------------------GKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLI 210 (791)
Q Consensus 159 ~ls~N~l~-------------------------~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l 210 (791)
.|++|.|. .-+|.++..|.+|..+|||.|.|.- +|+.+ .+|+.|+||+|+|
T Consensus 179 ~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp~-vPecly~l~~LrrLNLS~N~i 257 (1255)
T KOG0444|consen 179 KLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLPI-VPECLYKLRNLRRLNLSGNKI 257 (1255)
T ss_pred hcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCCc-chHHHhhhhhhheeccCcCce
Confidence 88888764 2356677777788888888888765 55543 7888889999998
Q ss_pred cccCCCCcCC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCc-ccCCCC-CcccccccccccCCC
Q 003847 211 NGSLPPDIGG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLT-GEIPES-NVFMNQESSSFSGNL 280 (791)
Q Consensus 211 ~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~-~~~p~~-~~~~~~~~~~~~~n~ 280 (791)
+ .+....+. .+|++|+||.|+|+ .+|+.+.+ |++|+.|.+.+|+|+ .-+|+. +.+..++.+...+|.
T Consensus 258 t-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcK-L~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~ 327 (1255)
T KOG0444|consen 258 T-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCK-LTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNK 327 (1255)
T ss_pred e-eeeccHHHHhhhhhhccccchhc-cchHHHhh-hHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccc
Confidence 8 44444444 37999999999999 99999987 999999999999986 234443 556666666666665
No 429
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.75 E-value=1.1e-19 Score=185.35 Aligned_cols=221 Identities=23% Similarity=0.232 Sum_probs=169.4
Q ss_pred eeeeeCCCCC----CCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccC-CcC
Q 003847 67 NGVTCASPGE----GNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSN-NLI 141 (791)
Q Consensus 67 ~gv~C~~~~~----~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l 141 (791)
.-|.|...+- -+-+...+.|+|..|+|+.+.+.+|+.+++|+.||||+|.|+.+-|..|.+|.+|..|-|.+ |+|
T Consensus 49 ~~VdCr~~GL~eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI 128 (498)
T KOG4237|consen 49 GIVDCRGKGLTEVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKI 128 (498)
T ss_pred ceEEccCCCcccCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCch
Confidence 3467763321 12345788999999999988889999999999999999999988999999999887776655 899
Q ss_pred CCCCccccCCCCCCCEEeCcCCcCCCCCcc------------------------ccCCCCCCCEEeCCCCcCCC------
Q 003847 142 SGHLPETMGSLHNLQLLNLSDNALAGKLPV------------------------SLTTLQSLTIVSLKNNYFSD------ 191 (791)
Q Consensus 142 ~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~------------------------~~~~l~~L~~L~L~~N~l~~------ 191 (791)
+...-..|++|.+|+.|.+.-|++.-.... .|..+.+++.+.|..|.+..
T Consensus 129 ~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~w 208 (498)
T KOG4237|consen 129 TDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPW 208 (498)
T ss_pred hhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccch
Confidence 855555677777777666666666533333 45555566666666665210
Q ss_pred -----------------CCC------------------------C------------------CCcccceeccccccccc
Q 003847 192 -----------------GLP------------------------S------------------KFNSVQVLDLSSNLING 212 (791)
Q Consensus 192 -----------------~~p------------------------~------------------~l~~L~~L~ls~N~l~~ 212 (791)
..| + .+++|+.|+|++|+|++
T Consensus 209 la~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~ 288 (498)
T KOG4237|consen 209 LADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITR 288 (498)
T ss_pred hhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccch
Confidence 000 0 13689999999999998
Q ss_pred cCCCCcCC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCCC-cccccccccccCCCCCCCCCCC
Q 003847 213 SLPPDIGG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPESN-VFMNQESSSFSGNLDLCGQPTK 288 (791)
Q Consensus 213 ~~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~~-~~~~~~~~~~~~n~~lc~~~~~ 288 (791)
.-+.+|.. ..|++|.|..|+|. .+....++.+..|+.|+|.+|+++..-|-.. ....+..+.+.+|||.|+|.+.
T Consensus 289 i~~~aFe~~a~l~eL~L~~N~l~-~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~ 365 (498)
T KOG4237|consen 289 IEDGAFEGAAELQELYLTRNKLE-FVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLA 365 (498)
T ss_pred hhhhhhcchhhhhhhhcCcchHH-HHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchH
Confidence 88888877 48999999999999 8888888899999999999999999888664 3446677889999999998764
No 430
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.75 E-value=5.3e-20 Score=166.88 Aligned_cols=176 Identities=28% Similarity=0.429 Sum_probs=96.6
Q ss_pred CCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEe
Q 003847 80 DSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLN 159 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 159 (791)
...++.|.|++|.++ .+|+.++.|.+|+.|++++|+|+ .+|..++.+++|+.|+++-|++. .+|..|+.++.|+.||
T Consensus 32 ~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levld 108 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLD 108 (264)
T ss_pred hhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhh
Confidence 344555555555554 34444555555555555555555 44555555555555555555554 4555555555555555
Q ss_pred CcCCcCC-CCCccccCCCCCCCEEeCCCCcCCCCCCCCCcccceeccccccccccCCCCcCC-ccccEEEccCCcCcccC
Q 003847 160 LSDNALA-GKLPVSLTTLQSLTIVSLKNNYFSDGLPSKFNSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEI 237 (791)
Q Consensus 160 ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~i 237 (791)
|++|+++ ..+|+.|..|+. |+-|+|+.|.+. .+|..++. .+|+.|.+.+|.|- ++
T Consensus 109 ltynnl~e~~lpgnff~m~t---------------------lralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~l 165 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTT---------------------LRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SL 165 (264)
T ss_pred ccccccccccCCcchhHHHH---------------------HHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hC
Confidence 5555553 234444444444 455555555554 55656655 46777777777766 67
Q ss_pred chhHhhcCCCCcEEEcccCcCcccCCCCCccc---ccccccccCCCCC
Q 003847 238 PPQFGEKIPVNATIDLSFNNLTGEIPESNVFM---NQESSSFSGNLDL 282 (791)
Q Consensus 238 p~~~~~~l~~l~~l~l~~N~l~~~~p~~~~~~---~~~~~~~~~n~~l 282 (791)
|.+++. +..|+.|.+.+|+|+-..|+...+. +........|||.
T Consensus 166 pkeig~-lt~lrelhiqgnrl~vlppel~~l~l~~~k~v~r~E~NPwv 212 (264)
T KOG0617|consen 166 PKEIGD-LTRLRELHIQGNRLTVLPPELANLDLVGNKQVMRMEENPWV 212 (264)
T ss_pred cHHHHH-HHHHHHHhcccceeeecChhhhhhhhhhhHHHHhhhhCCCC
Confidence 777766 7777777777777776555542221 1222344566663
No 431
>smart00090 RIO RIO-like kinase.
Probab=99.75 E-value=7e-18 Score=172.00 Aligned_cols=140 Identities=16% Similarity=0.219 Sum_probs=109.2
Q ss_pred cceeccccCceEEEEEE--eCCCcEEEEEEcCCCchh------------------------hHHHHHHHHHHHhccCCCC
Q 003847 479 SAYILGASGSSIMYKAV--LEDGTALAVRRIGENSVD------------------------RFRDFETQVRVIAKLVHPN 532 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~--~~~g~~vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~H~n 532 (791)
..+.||+|++|.||+|. ..+|+.||||++...... ....++.|+++++++.+..
T Consensus 32 i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~~ 111 (237)
T smart00090 32 IGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEAG 111 (237)
T ss_pred hCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 35689999999999998 568999999998643210 1123678999999997533
Q ss_pred --ccceeeEEEccCceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-CeecCCCCCCeEe
Q 003847 533 --LVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKK-HVHGNLKPRNVLL 609 (791)
Q Consensus 533 --Iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~-ivHrDlkp~NILl 609 (791)
+.+++++ ...++||||+++++|........ .+...+...++.|++.+|+|||+.| |+||||||+||++
T Consensus 112 i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli 182 (237)
T smart00090 112 VPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDV-----EPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILV 182 (237)
T ss_pred CCCCeeeEe----cCceEEEEEecCCcccccccccC-----CcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEE
Confidence 3444432 24589999999988876542221 2556677899999999999999999 9999999999999
Q ss_pred cCCCCeEEeccCcccccCC
Q 003847 610 GNDMEPKIGDFGLERLVTG 628 (791)
Q Consensus 610 ~~~~~~kL~DFGla~~~~~ 628 (791)
+ ++.++|+|||.+.....
T Consensus 183 ~-~~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 183 H-DGKVVIIDVSQSVELDH 200 (237)
T ss_pred E-CCCEEEEEChhhhccCC
Confidence 9 88999999999886553
No 432
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.73 E-value=1.4e-19 Score=192.90 Aligned_cols=179 Identities=32% Similarity=0.432 Sum_probs=131.9
Q ss_pred CCcEEEEEcCCCCCc-cCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccc-cCCCCCCCE
Q 003847 80 DSRVIGLALPNSQLL-GSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPET-MGSLHNLQL 157 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~ 157 (791)
++++.++.+.+|+|. .-+|..+..|..|+.||||+|+++ ..|..+....++..|+||+|+|. .||.. |.+|+-|-.
T Consensus 77 Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLf 154 (1255)
T KOG0444|consen 77 LPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLF 154 (1255)
T ss_pred chhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhh
Confidence 566777778888874 346778888888888888888888 77888888888888888888887 45544 678888888
Q ss_pred EeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCC----CCC---------------------CC---Ccccceecccccc
Q 003847 158 LNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSD----GLP---------------------SK---FNSVQVLDLSSNL 209 (791)
Q Consensus 158 L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~----~~p---------------------~~---l~~L~~L~ls~N~ 209 (791)
||||+|+|. .+|+.+..|..|++|.|++|.|.. .+| .. +.+|..+|||.|.
T Consensus 155 LDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~ 233 (1255)
T KOG0444|consen 155 LDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENN 233 (1255)
T ss_pred hccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccC
Confidence 888888888 778888888888888888886552 122 22 2466777777777
Q ss_pred ccccCCCCcCC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCC
Q 003847 210 INGSLPPDIGG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPES 265 (791)
Q Consensus 210 l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~ 265 (791)
|. .+|+.+.. .+|+.|+||+|+|+ .+...... +.+|+.|+||.|+|+ .+|+.
T Consensus 234 Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~-W~~lEtLNlSrNQLt-~LP~a 286 (1255)
T KOG0444|consen 234 LP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGE-WENLETLNLSRNQLT-VLPDA 286 (1255)
T ss_pred CC-cchHHHhhhhhhheeccCcCcee-eeeccHHH-Hhhhhhhccccchhc-cchHH
Confidence 76 66666555 47777777777777 55555555 667777777777777 44544
No 433
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.73 E-value=3.9e-20 Score=167.69 Aligned_cols=146 Identities=28% Similarity=0.426 Sum_probs=118.7
Q ss_pred eeeeeCCCCCCCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCC-CCC
Q 003847 67 NGVTCASPGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLIS-GHL 145 (791)
Q Consensus 67 ~gv~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~ 145 (791)
+-++.. |.....+.++..|+|.+|++. .+|..++.|+.|+.|+++-|++. ..|..|+.++.|+.|||.+|+++ ..+
T Consensus 43 NKl~~v-ppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldltynnl~e~~l 119 (264)
T KOG0617|consen 43 NKLTVV-PPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSL 119 (264)
T ss_pred Cceeec-CCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhccccccccccC
Confidence 334443 444566788999999999997 78999999999999999999998 89999999999999999999998 468
Q ss_pred ccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC---cccceeccccccccccCCCCc
Q 003847 146 PETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLINGSLPPDI 218 (791)
Q Consensus 146 p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~~ 218 (791)
|..|-.++.|+.|+|++|.|. .+|..+++|++|+.|.|..|.+-. +|..+ ..|+.|.+.+|+++ .+|+.+
T Consensus 120 pgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll~-lpkeig~lt~lrelhiqgnrl~-vlppel 192 (264)
T KOG0617|consen 120 PGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLLS-LPKEIGDLTRLRELHIQGNRLT-VLPPEL 192 (264)
T ss_pred CcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchhh-CcHHHHHHHHHHHHhcccceee-ecChhh
Confidence 999999999999999999999 999999999999999999998864 33322 44444555555554 333333
No 434
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.73 E-value=2.6e-17 Score=166.16 Aligned_cols=134 Identities=14% Similarity=0.259 Sum_probs=114.2
Q ss_pred eeccccCceEEEEEEeCCCcEEEEEEcCCCch--------hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEec
Q 003847 481 YILGASGSSIMYKAVLEDGTALAVRRIGENSV--------DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDF 552 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 552 (791)
..||+|++|.||+|.. +|..|+||+...... .....+.+|++++..++|++|.....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 3689999999999987 678899998654321 1124578899999999999998888887778889999999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccc
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERL 625 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 625 (791)
++|++|.+++... .. .+..++.+++.+|.++|+.+++|||++|.|||++ ++.++|+|||.+..
T Consensus 81 ~~G~~L~~~~~~~--------~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSN--------GM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhc--------cH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999987542 12 7889999999999999999999999999999999 78999999999875
No 435
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.73 E-value=2.2e-17 Score=165.09 Aligned_cols=130 Identities=18% Similarity=0.278 Sum_probs=107.6
Q ss_pred eccccCceEEEEEEeCCCcEEEEEEcCCCch--------hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEecc
Q 003847 482 ILGASGSSIMYKAVLEDGTALAVRRIGENSV--------DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
+||+|++|.||++.. +|..|++|+...... ....++.+|+++++.++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999985 578899998654211 11356788999999999887766666666677789999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccc
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERL 625 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 625 (791)
+|++|.+++.... . .++.|++.+|.+||+.|++|||++|.||+++ ++.++++|||++..
T Consensus 80 ~g~~l~~~~~~~~------~------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGN------D------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcH------H------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999988764421 1 7899999999999999999999999999999 78999999999875
No 436
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.72 E-value=3.4e-18 Score=182.11 Aligned_cols=180 Identities=27% Similarity=0.395 Sum_probs=130.5
Q ss_pred ceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCccc
Q 003847 545 EKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624 (791)
Q Consensus 545 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~ 624 (791)
..||.|++|...+|.+|+.+..... ..++...+.++.|++.|++| ++.+|||+||.||++..+..+||.|||+..
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e--~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~t 404 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGE--ERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVT 404 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCccc--ccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhhee
Confidence 4689999999999999997654432 37888999999999999999 999999999999999999999999999987
Q ss_pred ccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHH
Q 003847 625 LVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLE 704 (791)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~e 704 (791)
......... ......+...||.-||+||.+.+..|+.|+||||||++++|
T Consensus 405 s~~~~~~~~------------------------------~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~E 454 (516)
T KOG1033|consen 405 SQDKDETVA------------------------------PAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAE 454 (516)
T ss_pred ecccCCccc------------------------------chhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHH
Confidence 765433100 01123445669999999999999999999999999999999
Q ss_pred HHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 003847 705 LLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEA 773 (791)
Q Consensus 705 lltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 773 (791)
+++ +|... .+......++-+..+.+.+ ....+.-..|+.+++...|.+||++.++
T Consensus 455 L~~---~f~T~--------~er~~t~~d~r~g~ip~~~---~~d~p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 455 LLI---QFSTQ--------FERIATLTDIRDGIIPPEF---LQDYPEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred HHH---HhccH--------HHHHHhhhhhhcCCCChHH---hhcCcHHHHHHHHhcCCCcccCchHHHH
Confidence 987 12111 0111111222222221111 1111233568889999999999955443
No 437
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.71 E-value=5.5e-17 Score=161.90 Aligned_cols=137 Identities=14% Similarity=0.164 Sum_probs=107.9
Q ss_pred hhcceeccccCceEEEEEEeCCCcEEEEEEcCCCchh----------------------hHHHHHHHHHHHhccCCCC--
Q 003847 477 KASAYILGASGSSIMYKAVLEDGTALAVRRIGENSVD----------------------RFRDFETQVRVIAKLVHPN-- 532 (791)
Q Consensus 477 ~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~~l~H~n-- 532 (791)
+...+.||+|+||.||++..++|+.||||++...... ....+..|+.++.++.|++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 3345789999999999999888999999987542200 1123677899999998774
Q ss_pred ccceeeEEEccCceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCC
Q 003847 533 LVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGND 612 (791)
Q Consensus 533 Iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~ 612 (791)
++..++ ....++||||+++++|.+.... .....++.+++.++.++|+.||+||||||+||+++++
T Consensus 97 v~~~~~----~~~~~lv~e~~~g~~L~~~~~~-----------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~ 161 (198)
T cd05144 97 VPKPID----WNRHAVVMEYIDGVELYRVRVL-----------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDD 161 (198)
T ss_pred CCceee----cCCceEEEEEeCCcchhhcccc-----------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCC
Confidence 444443 2456899999999998764220 2346788999999999999999999999999999999
Q ss_pred CCeEEeccCcccccCC
Q 003847 613 MEPKIGDFGLERLVTG 628 (791)
Q Consensus 613 ~~~kL~DFGla~~~~~ 628 (791)
+.++|+|||++.....
T Consensus 162 ~~~~liDfg~~~~~~~ 177 (198)
T cd05144 162 EKIYIIDWPQMVSTDH 177 (198)
T ss_pred CcEEEEECCccccCCC
Confidence 9999999999976543
No 438
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.69 E-value=1.3e-16 Score=183.39 Aligned_cols=133 Identities=17% Similarity=0.247 Sum_probs=109.1
Q ss_pred cceeccccCceEEEEEEeCCCcEEEEEE-cCCC-c------hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEE
Q 003847 479 SAYILGASGSSIMYKAVLEDGTALAVRR-IGEN-S------VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIY 550 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~-~~~~-~------~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 550 (791)
..++||+|+||.||++...... +++|+ +.+. . ....+.+.+|++++++++|++++..+.++......++||
T Consensus 337 ~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~ 415 (535)
T PRK09605 337 PDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVM 415 (535)
T ss_pred ccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEE
Confidence 3578999999999999875443 44443 2221 1 112356889999999999999998888888878889999
Q ss_pred eccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCccccc
Q 003847 551 DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLV 626 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 626 (791)
||+++++|.+++. ....++.|++++|.|||+.|++||||||+|||+ .++.++|+|||+++..
T Consensus 416 E~~~g~~L~~~l~-------------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 416 EYIGGKDLKDVLE-------------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred EecCCCcHHHHHH-------------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 9999999988764 246789999999999999999999999999999 5779999999999864
No 439
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.68 E-value=3.6e-19 Score=181.52 Aligned_cols=192 Identities=29% Similarity=0.389 Sum_probs=144.8
Q ss_pred CCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEe
Q 003847 80 DSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLN 159 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 159 (791)
..++..|+.+.|.+. .+|+.++.+..|..|+..+|+++ ..|..++++.+|..|++.+|.+.. +|+..-++++|++||
T Consensus 113 ~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~-l~~~~i~m~~L~~ld 189 (565)
T KOG0472|consen 113 LISLVKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKA-LPENHIAMKRLKHLD 189 (565)
T ss_pred hhhhhhhhcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhh-CCHHHHHHHHHHhcc
Confidence 445566666666665 45566667777777777777776 566677777777777777777773 333344477788888
Q ss_pred CcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC---cccceeccccccccccCCCCcCC--ccccEEEccCCcCc
Q 003847 160 LSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLINGSLPPDIGG--YSLRYLNLSYNRLS 234 (791)
Q Consensus 160 ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~~~~--~~L~~L~l~~N~l~ 234 (791)
...|.++ .+|..++.|.+|+.|+|.+|+|.. +| .| +.|+.|+++.|+|. .+|..... .+|..|||.+|+|+
T Consensus 190 ~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~~-lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk 265 (565)
T KOG0472|consen 190 CNSNLLE-TLPPELGGLESLELLYLRRNKIRF-LP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK 265 (565)
T ss_pred cchhhhh-cCChhhcchhhhHHHHhhhccccc-CC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc
Confidence 8888777 788888888888888888888875 44 44 56888899999887 77777653 47899999999999
Q ss_pred ccCchhHhhcCCCCcEEEcccCcCcccCCCCCcccccccccccCCCC
Q 003847 235 GEIPPQFGEKIPVNATIDLSFNNLTGEIPESNVFMNQESSSFSGNLD 281 (791)
Q Consensus 235 g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~ 281 (791)
++|+++.. +.+|.+||||+|.+++..++-+.+ .+..+.+.|||-
T Consensus 266 -e~Pde~cl-LrsL~rLDlSNN~is~Lp~sLgnl-hL~~L~leGNPl 309 (565)
T KOG0472|consen 266 -EVPDEICL-LRSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPL 309 (565)
T ss_pred -cCchHHHH-hhhhhhhcccCCccccCCcccccc-eeeehhhcCCch
Confidence 89999887 888999999999999777666555 777788888864
No 440
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.67 E-value=4.2e-17 Score=185.27 Aligned_cols=212 Identities=21% Similarity=0.257 Sum_probs=140.0
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
-.+|..|+||.||.++++ +.+.+|.|+ .++.. +.+- ++.....|.+| |+-
T Consensus 88 IklisngAygavylvrh~~trqrfa~ki-Nkq~l-----ilRn--ilt~a~npfvv---------------------gDc 138 (1205)
T KOG0606|consen 88 IKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNL-----ILRN--ILTFAGNPFVV---------------------GDC 138 (1205)
T ss_pred eEeeccCCCCceeeeeccccccchhhcc-cccch-----hhhc--cccccCCccee---------------------chh
Confidence 358899999999999854 467888843 32211 0000 22222333333 333
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCC-CcCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS-SKAGG 637 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~~ 637 (791)
...++.-+ +++.. ++.+++|||+.||+|||+||+|.+|+.-|.+|+.|||+++........ .+.+.
T Consensus 139 ~tllk~~g-----~lPvd--------mvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~ 205 (1205)
T KOG0606|consen 139 ATLLKNIG-----PLPVD--------MVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGH 205 (1205)
T ss_pred hhhcccCC-----CCcch--------hhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcc
Confidence 33332221 23332 278999999999999999999999999999999999998864332211 11111
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELG 717 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~ 717 (791)
... ......-...|||+.|+|||++..+.|+..+|.|++|+|+||.+.|..||.++..
T Consensus 206 I~k----------------------~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtp 263 (1205)
T KOG0606|consen 206 IEK----------------------DTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP 263 (1205)
T ss_pred hHH----------------------HHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCH
Confidence 100 1112223456899999999999999999999999999999999999999987633
Q ss_pred CCCCcchhchhHHHHHHHHhhhcCc---cchHHHHHHHHHHHhhccCCCCCCCC
Q 003847 718 QGNGLLVEDKNRAIRLADAAIRADF---EGKEEALLSCFKLGYSCASPLPQKRP 768 (791)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RP 768 (791)
+ ++++..+.... +..+....+..+++.++|..+|..|-
T Consensus 264 e-------------elfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 264 E-------------ELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred H-------------HHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhc
Confidence 2 12221111111 11222456788899999999999995
No 441
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.66 E-value=8.2e-16 Score=157.16 Aligned_cols=140 Identities=19% Similarity=0.162 Sum_probs=109.6
Q ss_pred hhhcceecc-ccCceEEEEEEeCCCcEEEEEEcCCCc-------------hhhHHHHHHHHHHHhccCCCCc--cceeeE
Q 003847 476 LKASAYILG-ASGSSIMYKAVLEDGTALAVRRIGENS-------------VDRFRDFETQVRVIAKLVHPNL--VRIRGF 539 (791)
Q Consensus 476 ~~~~~~~lG-~G~~g~Vy~~~~~~g~~vavK~~~~~~-------------~~~~~~~~~E~~~l~~l~H~nI--v~l~~~ 539 (791)
....+.+|| .||.|+||.+... +..++||++.... ......+.+|++++.+++|++| ++.+++
T Consensus 32 ~~~~~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~ 110 (239)
T PRK01723 32 WQQQARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAA 110 (239)
T ss_pred HhhcCceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEee
Confidence 344567898 8999999999875 7789999885321 1223567889999999998875 677776
Q ss_pred EEccCc----eEEEEeccCC-CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCC
Q 003847 540 YWGVDE----KLIIYDFVPN-GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDME 614 (791)
Q Consensus 540 ~~~~~~----~~lv~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~ 614 (791)
...... .++||||++| .+|.+++... .++.. .+.|++.+|.+||+.||+||||||.|||++.++.
T Consensus 111 ~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~------~l~~~----~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~ 180 (239)
T PRK01723 111 RVVRHGLFYRADILIERIEGARDLVALLQEA------PLSEE----QWQAIGQLIARFHDAGVYHADLNAHNILLDPDGK 180 (239)
T ss_pred eeeecCcceeeeEEEEecCCCCCHHHHHhcC------CCCHH----HHHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCC
Confidence 544322 2599999997 6898877542 24543 3578999999999999999999999999999889
Q ss_pred eEEeccCccccc
Q 003847 615 PKIGDFGLERLV 626 (791)
Q Consensus 615 ~kL~DFGla~~~ 626 (791)
++|+|||.+...
T Consensus 181 v~LIDfg~~~~~ 192 (239)
T PRK01723 181 FWLIDFDRGELR 192 (239)
T ss_pred EEEEECCCcccC
Confidence 999999998764
No 442
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.63 E-value=1.4e-15 Score=150.32 Aligned_cols=136 Identities=17% Similarity=0.215 Sum_probs=99.8
Q ss_pred eeccccCceEEEEEEeCCCcEEEEEEcCCCchh--hHHH----------------------HHHHHHHHhccCCCC--cc
Q 003847 481 YILGASGSSIMYKAVLEDGTALAVRRIGENSVD--RFRD----------------------FETQVRVIAKLVHPN--LV 534 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~--~~~~----------------------~~~E~~~l~~l~H~n--Iv 534 (791)
..||+|+||.||+|...+|+.||||++...... .... ...|.+.+.++.+.. +.
T Consensus 3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~ 82 (187)
T cd05119 3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPVP 82 (187)
T ss_pred cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCCC
Confidence 479999999999999888999999998653211 1111 135666666664432 44
Q ss_pred ceeeEEEccCceEEEEeccCCCChhHH-HHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCeecCCCCCCeEecCC
Q 003847 535 RIRGFYWGVDEKLIIYDFVPNGSLANA-RYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE-KKHVHGNLKPRNVLLGND 612 (791)
Q Consensus 535 ~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~ivHrDlkp~NILl~~~ 612 (791)
+.+++ ...++||||++++.+... +.... .. .....++.+++.++.++|. .+|+||||||+||+++ +
T Consensus 83 ~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~------~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~ 150 (187)
T cd05119 83 KPIDL----NRHVLVMEFIGGDGIPAPRLKDVR------LL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-D 150 (187)
T ss_pred ceEec----CCCEEEEEEeCCCCccChhhhhhh------hc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-C
Confidence 55443 246899999998654321 11111 11 5678899999999999999 9999999999999999 8
Q ss_pred CCeEEeccCcccccCC
Q 003847 613 MEPKIGDFGLERLVTG 628 (791)
Q Consensus 613 ~~~kL~DFGla~~~~~ 628 (791)
+.++|+|||.+.....
T Consensus 151 ~~~~liDfg~a~~~~~ 166 (187)
T cd05119 151 GKVYIIDVPQAVEIDH 166 (187)
T ss_pred CcEEEEECcccccccC
Confidence 8999999999976654
No 443
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.61 E-value=2e-15 Score=174.70 Aligned_cols=157 Identities=31% Similarity=0.342 Sum_probs=90.0
Q ss_pred CCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCcc---ccCC-------------C-CCCCEEeCcCCcCCCC
Q 003847 106 FLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPE---TMGS-------------L-HNLQLLNLSDNALAGK 168 (791)
Q Consensus 106 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~---~~~~-------------l-~~L~~L~ls~N~l~~~ 168 (791)
.|+.|+|++|+|+ .+|. .+++|+.|+|++|+|++ +|. .+.. + .+|+.|+|++|+|+ .
T Consensus 283 ~L~~L~Ls~N~Lt-~LP~---~p~~L~~LdLS~N~L~~-Lp~lp~~L~~L~Ls~N~L~~LP~lp~~Lq~LdLS~N~Ls-~ 356 (788)
T PRK15387 283 GLCKLWIFGNQLT-SLPV---LPPGLQELSVSDNQLAS-LPALPSELCKLWAYNNQLTSLPTLPSGLQELSVSDNQLA-S 356 (788)
T ss_pred hcCEEECcCCccc-cccc---cccccceeECCCCcccc-CCCCcccccccccccCccccccccccccceEecCCCccC-C
Confidence 3555556666555 2332 12456666666666653 222 1111 1 36788888888888 4
Q ss_pred CccccCCCCCCCEEeCCCCcCCCCCCCCCcccceeccccccccccCCCCcCCccccEEEccCCcCcccCchhHhhcCCCC
Q 003847 169 LPVSLTTLQSLTIVSLKNNYFSDGLPSKFNSVQVLDLSSNLINGSLPPDIGGYSLRYLNLSYNRLSGEIPPQFGEKIPVN 248 (791)
Q Consensus 169 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~ls~N~l~~~~p~~~~~~~L~~L~l~~N~l~g~ip~~~~~~l~~l 248 (791)
+|.. ..+|+.|++++|+|++ +|....+|+.|+|++|+|+ .+|... .+|+.|+|++|+|+ .+|.. ..+|
T Consensus 357 LP~l---p~~L~~L~Ls~N~L~~-LP~l~~~L~~LdLs~N~Lt-~LP~l~--s~L~~LdLS~N~Ls-sIP~l----~~~L 424 (788)
T PRK15387 357 LPTL---PSELYKLWAYNNRLTS-LPALPSGLKELIVSGNRLT-SLPVLP--SELKELMVSGNRLT-SLPML----PSGL 424 (788)
T ss_pred CCCC---Ccccceehhhcccccc-CcccccccceEEecCCccc-CCCCcc--cCCCEEEccCCcCC-CCCcc----hhhh
Confidence 5543 2456667777777765 5555566777777777776 344332 35777777777776 46642 2345
Q ss_pred cEEEcccCcCcccCCCC-CcccccccccccCCCC
Q 003847 249 ATIDLSFNNLTGEIPES-NVFMNQESSSFSGNLD 281 (791)
Q Consensus 249 ~~l~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~ 281 (791)
+.|+|++|+|+ .+|.. ..+..+..+.+.+|+.
T Consensus 425 ~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~L 457 (788)
T PRK15387 425 LSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPL 457 (788)
T ss_pred hhhhhccCccc-ccChHHhhccCCCeEECCCCCC
Confidence 66777777776 44543 2344455555666653
No 444
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.59 E-value=5.3e-15 Score=172.39 Aligned_cols=138 Identities=29% Similarity=0.453 Sum_probs=66.9
Q ss_pred CCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCC
Q 003847 106 FLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLK 185 (791)
Q Consensus 106 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~ 185 (791)
+|+.|+|++|+|+ .+|..+. .+|+.|+|++|+|. .+|..+. .+|+.|+|++|+|+ .+|..+. ++|+.|+|+
T Consensus 221 nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls 291 (754)
T PRK15370 221 NIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVY 291 (754)
T ss_pred CCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECC
Confidence 4444444444444 2333221 23445555555544 3444332 24555555555555 3444332 355555555
Q ss_pred CCcCCCCCCCCC-cccceeccccccccccCCCCcCCccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCc
Q 003847 186 NNYFSDGLPSKF-NSVQVLDLSSNLINGSLPPDIGGYSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLT 259 (791)
Q Consensus 186 ~N~l~~~~p~~l-~~L~~L~ls~N~l~~~~p~~~~~~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~ 259 (791)
+|+|++ +|..+ ++|+.|+|++|+|+ .+|..+. .+|++|++++|.|+ .+|..+ .++|+.|+|++|+|+
T Consensus 292 ~N~Lt~-LP~~lp~sL~~L~Ls~N~Lt-~LP~~l~-~sL~~L~Ls~N~Lt-~LP~~l---~~sL~~L~Ls~N~L~ 359 (754)
T PRK15370 292 DNSIRT-LPAHLPSGITHLNVQSNSLT-ALPETLP-PGLKTLEAGENALT-SLPASL---PPELQVLDVSKNQIT 359 (754)
T ss_pred CCcccc-CcccchhhHHHHHhcCCccc-cCCcccc-ccceeccccCCccc-cCChhh---cCcccEEECCCCCCC
Confidence 555554 23222 34555555555555 2333221 35666666666665 455544 245666666666665
No 445
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.58 E-value=1.2e-14 Score=137.76 Aligned_cols=131 Identities=18% Similarity=0.184 Sum_probs=112.4
Q ss_pred eeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCC--CCccceeeEEEccCceEEEEeccCCCCh
Q 003847 481 YILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVH--PNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H--~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
..||+|.++.||++...+ ..++||....... ...+.+|+.+++.++| .+++++++++...+..+++|||++++.+
T Consensus 4 ~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~ 80 (155)
T cd05120 4 KLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETL 80 (155)
T ss_pred eecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeec
Confidence 468999999999999754 7899999876543 4678899999999976 5899999988888889999999988877
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC---CCeecCCCCCCeEecCCCCeEEeccCccccc
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK---KHVHGNLKPRNVLLGNDMEPKIGDFGLERLV 626 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~---~ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 626 (791)
..+ +......++.+++++|+++|.. +++|+|++|+||++++.+.++++|||.+...
T Consensus 81 ~~~------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 81 DEV------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred ccC------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 543 4456678899999999999984 7999999999999999899999999998754
No 446
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.58 E-value=7.3e-15 Score=170.09 Aligned_cols=178 Identities=30% Similarity=0.322 Sum_probs=117.4
Q ss_pred CcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccC-----------------CCCccEEEccCCcCCC
Q 003847 81 SRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFN-----------------ASQLRNLDLSNNLISG 143 (791)
Q Consensus 81 ~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-----------------l~~L~~L~L~~N~l~~ 143 (791)
.+++.|+|.+|+|+. +|. .+++|++|+|++|+|+. +|..+.+ ..+|+.|+|++|+|+
T Consensus 222 ~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lts-LP~lp~sL~~L~Ls~N~L~~Lp~lp~~L~~L~Ls~N~Lt- 295 (788)
T PRK15387 222 AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTS-LPVLPPGLLELSIFSNPLTHLPALPSGLCKLWIFGNQLT- 295 (788)
T ss_pred cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccCc-ccCcccccceeeccCCchhhhhhchhhcCEEECcCCccc-
Confidence 356777777777764 443 24677777777777773 3432111 134555666666666
Q ss_pred CCccccCCCCCCCEEeCcCCcCCCCCccc---cC----------CC----CCCCEEeCCCCcCCCCCCCCCcccceeccc
Q 003847 144 HLPETMGSLHNLQLLNLSDNALAGKLPVS---LT----------TL----QSLTIVSLKNNYFSDGLPSKFNSVQVLDLS 206 (791)
Q Consensus 144 ~~p~~~~~l~~L~~L~ls~N~l~~~~p~~---~~----------~l----~~L~~L~L~~N~l~~~~p~~l~~L~~L~ls 206 (791)
.+|. .+++|+.|+|++|+|++ +|.. +. .+ .+|+.|+|++|+|++ +|....+|+.|+++
T Consensus 296 ~LP~---~p~~L~~LdLS~N~L~~-Lp~lp~~L~~L~Ls~N~L~~LP~lp~~Lq~LdLS~N~Ls~-LP~lp~~L~~L~Ls 370 (788)
T PRK15387 296 SLPV---LPPGLQELSVSDNQLAS-LPALPSELCKLWAYNNQLTSLPTLPSGLQELSVSDNQLAS-LPTLPSELYKLWAY 370 (788)
T ss_pred cccc---cccccceeECCCCcccc-CCCCcccccccccccCccccccccccccceEecCCCccCC-CCCCCcccceehhh
Confidence 3443 23689999999999985 3431 11 11 267788888888876 55555778888888
Q ss_pred cccccccCCCCcCCccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCCCcccccccccccCCC
Q 003847 207 SNLINGSLPPDIGGYSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPESNVFMNQESSSFSGNL 280 (791)
Q Consensus 207 ~N~l~~~~p~~~~~~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 280 (791)
+|+|+ .+|... .+|+.|+|++|+|+ .+|.. .++|+.|+|++|+|++ +|.. ..++..+.+.+|.
T Consensus 371 ~N~L~-~LP~l~--~~L~~LdLs~N~Lt-~LP~l----~s~L~~LdLS~N~Lss-IP~l--~~~L~~L~Ls~Nq 433 (788)
T PRK15387 371 NNRLT-SLPALP--SGLKELIVSGNRLT-SLPVL----PSELKELMVSGNRLTS-LPML--PSGLLSLSVYRNQ 433 (788)
T ss_pred ccccc-cCcccc--cccceEEecCCccc-CCCCc----ccCCCEEEccCCcCCC-CCcc--hhhhhhhhhccCc
Confidence 88887 466433 47999999999999 67753 4679999999999986 5643 2234445555543
No 447
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.57 E-value=1.7e-16 Score=181.49 Aligned_cols=249 Identities=22% Similarity=0.224 Sum_probs=183.9
Q ss_pred eccccCceEEEEEEeC--CCcEEEEEEcCCCc--hhhHHHHHHHHHHHhccC-CCCccceeeEEEccCceEEEEeccCCC
Q 003847 482 ILGASGSSIMYKAVLE--DGTALAVRRIGENS--VDRFRDFETQVRVIAKLV-HPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~~~--~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
-||+|.|+.|-..... ....+|+|.+.... ....+....|..+-+.+. |+|++.+++.....+..+++++|..++
T Consensus 27 ~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s~g~ 106 (601)
T KOG0590|consen 27 SIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYSDGG 106 (601)
T ss_pred cccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccccCccccc
Confidence 3889999999888753 34567777775543 333345556777777776 999999999999999999999999999
Q ss_pred ChhHHHH-hhcCCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCCeecCCCCCCeEecCCC-CeEEeccCcccccCCCCCCC
Q 003847 557 SLANARY-RKMGSSPCHLPWEARLKIAKGVARGLAFLH-EKKHVHGNLKPRNVLLGNDM-EPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 557 sL~~~l~-~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH-~~~ivHrDlkp~NILl~~~~-~~kL~DFGla~~~~~~~~~~ 633 (791)
++.+.+. ... . ..+......++.|+..++.|+| ..++.||||||+|.+++..+ ..|++|||+|........
T Consensus 107 ~~f~~i~~~~~-~---~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g-- 180 (601)
T KOG0590|consen 107 SLFSKISHPDS-T---GTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNG-- 180 (601)
T ss_pred ccccccccCCc-c---CCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccccCC--
Confidence 9988773 222 0 2666778889999999999999 99999999999999999999 999999999987654110
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCC-CCcccCcccccCC-CCCCchhhHHHHHHHHHHHhCCcc
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGG-ISPYHAPESLRSI-KPNPKWDVYSFGVILLELLTGKVI 711 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-t~~y~APE~~~~~-~~~~~sDvwSlGvil~elltG~~p 711 (791)
........+| ++.|+|||...+. ...+..|+||.|+++.-+++|..|
T Consensus 181 -------------------------------~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p 229 (601)
T KOG0590|consen 181 -------------------------------AERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELP 229 (601)
T ss_pred -------------------------------cceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCC
Confidence 0112234457 9999999999884 457889999999999999999999
Q ss_pred hhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 712 VVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 712 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
+.......... ..+....................+++.+++..+|..|.+.+++..
T Consensus 230 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 230 WDFPSRKDGRY--------SSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred ccccccccccc--------eeecccccccccCccccCChhhhhcccccccCCchhccccccccc
Confidence 86543322111 111111111111222234556778888999999999999887643
No 448
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.57 E-value=3.5e-17 Score=167.21 Aligned_cols=193 Identities=27% Similarity=0.421 Sum_probs=141.3
Q ss_pred CCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEE
Q 003847 79 NDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLL 158 (791)
Q Consensus 79 ~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 158 (791)
++..++.|++.+|+++ .+|++++.+..++.|+.++|++. .+|.+++.+.+|..|+.++|.+. .+|+.++.+..|+.|
T Consensus 66 nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl 142 (565)
T KOG0472|consen 66 NLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDL 142 (565)
T ss_pred cccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhh
Confidence 4566788888888887 56777888888888888888887 67777777777777777777776 666667777777777
Q ss_pred eCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCC----------------------CC---Ccccceecccccccccc
Q 003847 159 NLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLP----------------------SK---FNSVQVLDLSSNLINGS 213 (791)
Q Consensus 159 ~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p----------------------~~---l~~L~~L~ls~N~l~~~ 213 (791)
+..+|+++ ..|+.+.++.+|..|++.+|++....| .. +.+|..|+|..|+|. .
T Consensus 143 ~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~tlP~~lg~l~~L~~LyL~~Nki~-~ 220 (565)
T KOG0472|consen 143 DATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLETLPPELGGLESLELLYLRRNKIR-F 220 (565)
T ss_pred hccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHHHHHHHhcccchhhhhcCChhhcchhhhHHHHhhhcccc-c
Confidence 77777777 566666555555555555555554333 22 256777778888887 6
Q ss_pred CCCCcCC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCCCcccc-cccccccCC
Q 003847 214 LPPDIGG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPESNVFMN-QESSSFSGN 279 (791)
Q Consensus 214 ~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~~~~~~-~~~~~~~~n 279 (791)
+| .|.+ ..|++|+++.|+|+ .+|.+....++++.+|||.+|+++ .+|+..+..+ +..+.+.+|
T Consensus 221 lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN 285 (565)
T KOG0472|consen 221 LP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNN 285 (565)
T ss_pred CC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCC
Confidence 66 4444 56888888888888 889998878999999999999998 5676655554 666666665
No 449
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.56 E-value=4.9e-15 Score=172.64 Aligned_cols=178 Identities=30% Similarity=0.418 Sum_probs=134.8
Q ss_pred cEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCc
Q 003847 82 RVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLS 161 (791)
Q Consensus 82 ~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls 161 (791)
+++.|+|++|+|+ .+|..+. .+|+.|+|++|+|. .+|..+. ++|+.|+|++|+|+ .+|..+. .+|+.|+|+
T Consensus 221 nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls 291 (754)
T PRK15370 221 NIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVY 291 (754)
T ss_pred CCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECC
Confidence 4566666666665 3454443 47999999999998 6777664 58999999999999 6787664 589999999
Q ss_pred CCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCCcccceeccccccccccCCCCcCCccccEEEccCCcCcccCchhH
Q 003847 162 DNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKFNSVQVLDLSSNLINGSLPPDIGGYSLRYLNLSYNRLSGEIPPQF 241 (791)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~ls~N~l~~~~p~~~~~~~L~~L~l~~N~l~g~ip~~~ 241 (791)
+|+|+ .+|..+. ++|+.|+|++|+|+...+...++|+.|++++|.|++ +|..+. .+|+.|+|++|+|+ .+|..+
T Consensus 292 ~N~Lt-~LP~~lp--~sL~~L~Ls~N~Lt~LP~~l~~sL~~L~Ls~N~Lt~-LP~~l~-~sL~~L~Ls~N~L~-~LP~~l 365 (754)
T PRK15370 292 DNSIR-TLPAHLP--SGITHLNVQSNSLTALPETLPPGLKTLEAGENALTS-LPASLP-PELQVLDVSKNQIT-VLPETL 365 (754)
T ss_pred CCccc-cCcccch--hhHHHHHhcCCccccCCccccccceeccccCCcccc-CChhhc-CcccEEECCCCCCC-cCChhh
Confidence 99999 4666553 579999999999997433344789999999999984 676554 58999999999998 788766
Q ss_pred hhcCCCCcEEEcccCcCcccCCCCCcccccccccccCC
Q 003847 242 GEKIPVNATIDLSFNNLTGEIPESNVFMNQESSSFSGN 279 (791)
Q Consensus 242 ~~~l~~l~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n 279 (791)
.++|+.|+|++|+|+. +|.... ..+..+.+.+|
T Consensus 366 ---p~~L~~LdLs~N~Lt~-LP~~l~-~sL~~LdLs~N 398 (754)
T PRK15370 366 ---PPTITTLDVSRNALTN-LPENLP-AALQIMQASRN 398 (754)
T ss_pred ---cCCcCEEECCCCcCCC-CCHhHH-HHHHHHhhccC
Confidence 4689999999999985 454321 23444445554
No 450
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.54 E-value=2.8e-16 Score=160.58 Aligned_cols=197 Identities=21% Similarity=0.208 Sum_probs=150.4
Q ss_pred eeeeeeCCCCCCCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcC-CCCCCCCcccccCCCCccEEEccCCcCCCC
Q 003847 66 WNGVTCASPGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSN-NSLNGSLSFSLFNASQLRNLDLSNNLISGH 144 (791)
Q Consensus 66 w~gv~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 144 (791)
-++|+-..++.|..+.++..|||++|+|+.+-|.+|..|..|..|-|.+ |+|+......|.+|..|+.|.|.-|++.-.
T Consensus 76 qN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~Ci 155 (498)
T KOG4237|consen 76 QNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINCI 155 (498)
T ss_pred cCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcch
Confidence 5788888889999999999999999999999999999999988887666 899866556666666665555555555443
Q ss_pred Ccc------------------------ccCCCCCCCEEeCcCCcCC----------------------------------
Q 003847 145 LPE------------------------TMGSLHNLQLLNLSDNALA---------------------------------- 166 (791)
Q Consensus 145 ~p~------------------------~~~~l~~L~~L~ls~N~l~---------------------------------- 166 (791)
..+ +|..+.+++.+.+..|.+-
T Consensus 156 r~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~R 235 (498)
T KOG4237|consen 156 RQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKR 235 (498)
T ss_pred hHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecchHHHHHHH
Confidence 333 4555555555555555421
Q ss_pred ---------------------------CCCc-cccCCCCCCCEEeCCCCcCCCCCCCCC---cccceeccccccccccCC
Q 003847 167 ---------------------------GKLP-VSLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLINGSLP 215 (791)
Q Consensus 167 ---------------------------~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p 215 (791)
+.-| ..|..|++|+.|+|++|+|+++-+..| ..|+.|.|..|+|...-.
T Consensus 236 i~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~ 315 (498)
T KOG4237|consen 236 INQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSS 315 (498)
T ss_pred hcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHH
Confidence 0000 136688999999999999999888777 689999999999985555
Q ss_pred CCcCC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCC
Q 003847 216 PDIGG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIP 263 (791)
Q Consensus 216 ~~~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p 263 (791)
..|.+ ..|+.|+|.+|+|+ .+-...|+.+.+|..|+|-.|++.+..-
T Consensus 316 ~~f~~ls~L~tL~L~~N~it-~~~~~aF~~~~~l~~l~l~~Np~~CnC~ 363 (498)
T KOG4237|consen 316 GMFQGLSGLKTLSLYDNQIT-TVAPGAFQTLFSLSTLNLLSNPFNCNCR 363 (498)
T ss_pred HhhhccccceeeeecCCeeE-EEecccccccceeeeeehccCcccCccc
Confidence 55655 47999999999999 5555556669999999999999986654
No 451
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.53 E-value=7.2e-16 Score=172.87 Aligned_cols=196 Identities=26% Similarity=0.379 Sum_probs=134.7
Q ss_pred CCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEe
Q 003847 80 DSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLN 159 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 159 (791)
...++.++++.|++++. |.+++.+.+|+.|+..+|+|. .+|..+...++|+.|++.+|.++ .+|....+++.|++|+
T Consensus 240 p~nl~~~dis~n~l~~l-p~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLd 316 (1081)
T KOG0618|consen 240 PLNLQYLDISHNNLSNL-PEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLD 316 (1081)
T ss_pred cccceeeecchhhhhcc-hHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeee
Confidence 45678888888888854 488899999999999999985 66666666666666666666666 5666666666666666
Q ss_pred CcCCcCC-------------------------------------------------CCCccccCCCCCCCEEeCCCCcCC
Q 003847 160 LSDNALA-------------------------------------------------GKLPVSLTTLQSLTIVSLKNNYFS 190 (791)
Q Consensus 160 ls~N~l~-------------------------------------------------~~~p~~~~~l~~L~~L~L~~N~l~ 190 (791)
|..|+|. ...-+.|.+.++|+.|+|++|+|.
T Consensus 317 L~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~ 396 (1081)
T KOG0618|consen 317 LQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLN 396 (1081)
T ss_pred ehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccc
Confidence 6666665 222223345556666666666665
Q ss_pred CCCCC----CCcccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCc-ccCCC
Q 003847 191 DGLPS----KFNSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLT-GEIPE 264 (791)
Q Consensus 191 ~~~p~----~l~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~-~~~p~ 264 (791)
. +|+ .|..|+.|+||+|+|+ .+|..+.. ..|++|...+|+|. ..| ++.+ ++.|+++|||.|+|+ ..+|.
T Consensus 397 ~-fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~-l~qL~~lDlS~N~L~~~~l~~ 471 (1081)
T KOG0618|consen 397 S-FPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQ-LPQLKVLDLSCNNLSEVTLPE 471 (1081)
T ss_pred c-CCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhh-cCcceEEecccchhhhhhhhh
Confidence 4 332 2345666666666666 55555544 35666666666666 666 5555 899999999999997 45566
Q ss_pred CCcccccccccccCCCCCC
Q 003847 265 SNVFMNQESSSFSGNLDLC 283 (791)
Q Consensus 265 ~~~~~~~~~~~~~~n~~lc 283 (791)
...+.+++.+.+.||.|+-
T Consensus 472 ~~p~p~LkyLdlSGN~~l~ 490 (1081)
T KOG0618|consen 472 ALPSPNLKYLDLSGNTRLV 490 (1081)
T ss_pred hCCCcccceeeccCCcccc
Confidence 5566888999999999743
No 452
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.51 E-value=1.8e-13 Score=170.57 Aligned_cols=198 Identities=21% Similarity=0.230 Sum_probs=157.3
Q ss_pred CCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEE
Q 003847 79 NDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLL 158 (791)
Q Consensus 79 ~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 158 (791)
...+++.|+|.+|++. .++..+..+++|+.|+|++|...+.+| .+..+++|+.|+|++|..-..+|..++++++|+.|
T Consensus 609 ~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L 686 (1153)
T PLN03210 609 RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDL 686 (1153)
T ss_pred CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEE
Confidence 3567888999998886 567778889999999999876555777 48889999999999887666889999999999999
Q ss_pred eCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCCcccceeccccccccccCCCCcC-------------------
Q 003847 159 NLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKFNSVQVLDLSSNLINGSLPPDIG------------------- 219 (791)
Q Consensus 159 ~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~ls~N~l~~~~p~~~~------------------- 219 (791)
+|++|..-..+|..+ ++++|+.|+|++|...+.+|....+|+.|+|++|.++ .+|..+.
T Consensus 687 ~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~~~nL~~L~L~~n~i~-~lP~~~~l~~L~~L~l~~~~~~~l~~ 764 (1153)
T PLN03210 687 DMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDISTNISWLDLDETAIE-EFPSNLRLENLDELILCEMKSEKLWE 764 (1153)
T ss_pred eCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccccCCcCeeecCCCccc-cccccccccccccccccccchhhccc
Confidence 999875545777766 7899999999998777777777788999999999886 5554321
Q ss_pred ------------CccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCCCcccccccccccCCCC
Q 003847 220 ------------GYSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPESNVFMNQESSSFSGNLD 281 (791)
Q Consensus 220 ------------~~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~ 281 (791)
..+|+.|+|++|...+.+|..+.. +++|+.|+|++|+..+.+|....+..+..+.+.++..
T Consensus 765 ~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~-L~~L~~L~Ls~C~~L~~LP~~~~L~sL~~L~Ls~c~~ 837 (1153)
T PLN03210 765 RVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQN-LHKLEHLEIENCINLETLPTGINLESLESLDLSGCSR 837 (1153)
T ss_pred cccccchhhhhccccchheeCCCCCCccccChhhhC-CCCCCEEECCCCCCcCeeCCCCCccccCEEECCCCCc
Confidence 126888899988877789998876 9999999999987666778776666677777776544
No 453
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.49 E-value=9.3e-16 Score=163.46 Aligned_cols=174 Identities=25% Similarity=0.369 Sum_probs=157.7
Q ss_pred CCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEe
Q 003847 80 DSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLN 159 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 159 (791)
+...+.+||+.|++. .+|.++..+..|+.|.|+.|.|. .+|..+.+|..|++|||+.|+++ .+|..++.|+ |+.|-
T Consensus 74 ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli 149 (722)
T KOG0532|consen 74 LTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLI 149 (722)
T ss_pred ccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEE
Confidence 456678899999997 78889999999999999999999 89999999999999999999999 8999899887 99999
Q ss_pred CcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCC--CCcccceeccccccccccCCCCcCCccccEEEccCCcCcccC
Q 003847 160 LSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPS--KFNSVQVLDLSSNLINGSLPPDIGGYSLRYLNLSYNRLSGEI 237 (791)
Q Consensus 160 ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~--~l~~L~~L~ls~N~l~~~~p~~~~~~~L~~L~l~~N~l~g~i 237 (791)
+++|+++ .+|..++.+..|..|+.+.|.+....+. .+.+|+.|++..|++. .+|..+..+.|..||+|+|+++ .|
T Consensus 150 ~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~slpsql~~l~slr~l~vrRn~l~-~lp~El~~LpLi~lDfScNkis-~i 226 (722)
T KOG0532|consen 150 VSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQSLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSLPLIRLDFSCNKIS-YL 226 (722)
T ss_pred EecCccc-cCCcccccchhHHHhhhhhhhhhhchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCCceeeeecccCcee-ec
Confidence 9999999 8999999999999999999999874433 2478999999999998 7787887889999999999999 99
Q ss_pred chhHhhcCCCCcEEEcccCcCccc
Q 003847 238 PPQFGEKIPVNATIDLSFNNLTGE 261 (791)
Q Consensus 238 p~~~~~~l~~l~~l~l~~N~l~~~ 261 (791)
|..|.+ |..|++|-|.+|+|+..
T Consensus 227 Pv~fr~-m~~Lq~l~LenNPLqSP 249 (722)
T KOG0532|consen 227 PVDFRK-MRHLQVLQLENNPLQSP 249 (722)
T ss_pred chhhhh-hhhheeeeeccCCCCCC
Confidence 999988 99999999999999843
No 454
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.48 E-value=1.4e-13 Score=153.05 Aligned_cols=141 Identities=21% Similarity=0.289 Sum_probs=102.0
Q ss_pred eeccccCceEEEEEEeCCCcEEEEEEcCCCchhhH----------------------------------------HHHHH
Q 003847 481 YILGASGSSIMYKAVLEDGTALAVRRIGENSVDRF----------------------------------------RDFET 520 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~----------------------------------------~~~~~ 520 (791)
+-||+|++|.||+|++++|+.||||+.+....... -+|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 57999999999999999999999999865321110 02445
Q ss_pred HHHHHhccC----CCCccceeeEEE-ccCceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHH-HHHHHhc
Q 003847 521 QVRVIAKLV----HPNLVRIRGFYW-GVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVAR-GLAFLHE 594 (791)
Q Consensus 521 E~~~l~~l~----H~nIv~l~~~~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~-gL~yLH~ 594 (791)
|++.+.+++ |.+-+.+-.++. ..+..++||||++|++|.++....... . ....++.+++. .+..+|.
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~----~---~~~~ia~~~~~~~l~ql~~ 275 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAG----L---DRKALAENLARSFLNQVLR 275 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcC----C---CHHHHHHHHHHHHHHHHHh
Confidence 666555552 332233323332 234679999999999999876543211 2 23456666666 4788999
Q ss_pred CCCeecCCCCCCeEecCCCCeEEeccCcccccCC
Q 003847 595 KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTG 628 (791)
Q Consensus 595 ~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 628 (791)
.|++|+|+||.||+++.++.++++|||++..+..
T Consensus 276 ~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 276 DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred CCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 9999999999999999999999999999987753
No 455
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.44 E-value=1e-12 Score=163.79 Aligned_cols=59 Identities=32% Similarity=0.333 Sum_probs=28.7
Q ss_pred CCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCC
Q 003847 80 DSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNN 139 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 139 (791)
..+++.|+|++++..+.+| .++.+++|+.|+|++|.....+|..+.++++|+.|+|++|
T Consensus 633 l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c 691 (1153)
T PLN03210 633 LTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRC 691 (1153)
T ss_pred CCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCC
Confidence 3445555555544333443 2445555555555554433344555555555555555543
No 456
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.44 E-value=1.4e-13 Score=150.08 Aligned_cols=257 Identities=19% Similarity=0.130 Sum_probs=182.3
Q ss_pred ccchHHHhhhcceeccc--cCceEEEEEEe---CCCcEEEEEEcCC--CchhhHHHHHHHHHHHhccC-CCCccceeeEE
Q 003847 469 ELELETLLKASAYILGA--SGSSIMYKAVL---EDGTALAVRRIGE--NSVDRFRDFETQVRVIAKLV-HPNLVRIRGFY 540 (791)
Q Consensus 469 ~~~~~~~~~~~~~~lG~--G~~g~Vy~~~~---~~g~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~ 540 (791)
.+++.+.......-+|. |.+|.||.+.. +++..+|+|+-+. ........=.+|+...++++ |+|.++.+..+
T Consensus 108 ~~s~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~ 187 (524)
T KOG0601|consen 108 FDSFFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAW 187 (524)
T ss_pred ccchhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCccc
Confidence 34445555555677899 99999999985 5688999998433 22222233345666666664 99999999999
Q ss_pred EccCceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHH----HHHHHhcCCCeecCCCCCCeEecCC-CCe
Q 003847 541 WGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVAR----GLAFLHEKKHVHGNLKPRNVLLGND-MEP 615 (791)
Q Consensus 541 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~----gL~yLH~~~ivHrDlkp~NILl~~~-~~~ 615 (791)
...+..++-+|++ +.+|..+.+.... .++....+.+..+..+ ||.++|+.+++|-|+||.||+...+ ...
T Consensus 188 e~~~~lfiqtE~~-~~sl~~~~~~~~~----~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~ 262 (524)
T KOG0601|consen 188 EGSGILFIQTELC-GESLQSYCHTPCN----FLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSC 262 (524)
T ss_pred ccCCcceeeeccc-cchhHHhhhcccc----cCCchhhhhHHhhhhhcccccccccCCCcccccccchhheeccccccee
Confidence 9999999999998 5788888776543 3777788888888888 9999999999999999999999998 889
Q ss_pred EEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhh
Q 003847 616 KIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDV 695 (791)
Q Consensus 616 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDv 695 (791)
+++|||+...+........... .....|...|++||...+ -++.+.|+
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~-------------------------------~~r~~~~~~Y~~ke~~~~-l~~~~~di 310 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKV-------------------------------SKRPEGDCIYAAKELLNG-LATFASDI 310 (524)
T ss_pred ecCCcceeEEccCCccccceee-------------------------------eecCCCCceEeChhhhcc-ccchHhhh
Confidence 9999999988865442211100 011135666999999876 67899999
Q ss_pred HHHHHHHHHHHhCCcchhcc-ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 003847 696 YSFGVILLELLTGKVIVVDE-LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEAL 774 (791)
Q Consensus 696 wSlGvil~elltG~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 774 (791)
|++|.++.+..++...+... ...|...- ... +-+... ..-..++...+..|++.+|..|++.+.+.
T Consensus 311 ~sl~ev~l~~~l~~~~~~~g~~~~W~~~r--~~~----ip~e~~-------~~~s~~l~~~~~~~~d~~~~~~~~~q~~~ 377 (524)
T KOG0601|consen 311 FSLGEVILEAILGSHLPSVGKNSSWSQLR--QGY----IPLEFC-------EGGSSSLRSVTSQMLDEDPRLRLTAQILT 377 (524)
T ss_pred cchhhhhHhhHhhcccccCCCCCCccccc--ccc----Cchhhh-------cCcchhhhhHHHHhcCcchhhhhHHHHHh
Confidence 99999999999988754322 22222110 000 000011 01123334478899999999999888765
Q ss_pred H
Q 003847 775 Q 775 (791)
Q Consensus 775 ~ 775 (791)
.
T Consensus 378 ~ 378 (524)
T KOG0601|consen 378 A 378 (524)
T ss_pred c
Confidence 4
No 457
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.43 E-value=1.1e-14 Score=156.94 Aligned_cols=182 Identities=26% Similarity=0.312 Sum_probs=135.6
Q ss_pred CCCcEEEEEcCCCCCccCCCcCCCCCCC---CCEEeCcCCCCCC----CCcccccCC-CCccEEEccCCcCCCC----Cc
Q 003847 79 NDSRVIGLALPNSQLLGSIPADLGMIEF---LQYLDLSNNSLNG----SLSFSLFNA-SQLRNLDLSNNLISGH----LP 146 (791)
Q Consensus 79 ~~~~v~~L~L~~~~l~~~~~~~~~~l~~---L~~L~L~~N~l~~----~~p~~~~~l-~~L~~L~L~~N~l~~~----~p 146 (791)
...+++.|+|++|.+.+..+..+..+.. |++|+|++|++++ .+...+..+ ++|+.|+|++|.|++. ++
T Consensus 79 ~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~ 158 (319)
T cd00116 79 KGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALA 158 (319)
T ss_pred hcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHH
Confidence 3668999999999998777776666666 9999999999883 233455666 8999999999999843 34
Q ss_pred cccCCCCCCCEEeCcCCcCCCC----CccccCCCCCCCEEeCCCCcCCCCCC-------CCCcccceeccccccccccCC
Q 003847 147 ETMGSLHNLQLLNLSDNALAGK----LPVSLTTLQSLTIVSLKNNYFSDGLP-------SKFNSVQVLDLSSNLINGSLP 215 (791)
Q Consensus 147 ~~~~~l~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p-------~~l~~L~~L~ls~N~l~~~~p 215 (791)
..+..+.+|+.|+|++|.+++. ++..+..+++|+.|+|++|.+++... ..+++|++|++++|.+++...
T Consensus 159 ~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~ 238 (319)
T cd00116 159 KALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGA 238 (319)
T ss_pred HHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHH
Confidence 4577788999999999999842 34456667899999999999875332 234789999999999875222
Q ss_pred CCcC------CccccEEEccCCcCcc----cCchhHhhcCCCCcEEEcccCcCccc
Q 003847 216 PDIG------GYSLRYLNLSYNRLSG----EIPPQFGEKIPVNATIDLSFNNLTGE 261 (791)
Q Consensus 216 ~~~~------~~~L~~L~l~~N~l~g----~ip~~~~~~l~~l~~l~l~~N~l~~~ 261 (791)
..+. ...|++|++++|.++. .+...+.. +++|++|++++|.++..
T Consensus 239 ~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~-~~~L~~l~l~~N~l~~~ 293 (319)
T cd00116 239 AALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAE-KESLLELDLRGNKFGEE 293 (319)
T ss_pred HHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhc-CCCccEEECCCCCCcHH
Confidence 2211 2479999999999972 23444444 68899999999999744
No 458
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.40 E-value=1.6e-14 Score=162.30 Aligned_cols=199 Identities=26% Similarity=0.263 Sum_probs=159.6
Q ss_pred CCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEe
Q 003847 80 DSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLN 159 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 159 (791)
..+++.|+.++|-+....+.. .-.+|+++++++|+++ .+|..+..+.+|+.|+..+|+|+ .+|..+...++|+.|.
T Consensus 218 g~~l~~L~a~~n~l~~~~~~p--~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~ 293 (1081)
T KOG0618|consen 218 GPSLTALYADHNPLTTLDVHP--VPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLS 293 (1081)
T ss_pred CcchheeeeccCcceeecccc--ccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHH
Confidence 357788888888887443322 2357999999999999 56799999999999999999997 8999999999999999
Q ss_pred CcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCC----------------------------Ccccceecccccccc
Q 003847 160 LSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSK----------------------------FNSVQVLDLSSNLIN 211 (791)
Q Consensus 160 ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~----------------------------l~~L~~L~ls~N~l~ 211 (791)
+.+|.++ -+|.....+++|++|+|..|+|....+.. ++.|+.|.|.+|.|+
T Consensus 294 ~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Lt 372 (1081)
T KOG0618|consen 294 AAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLT 372 (1081)
T ss_pred hhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCccc
Confidence 9999999 78888999999999999999998633211 145788999999997
Q ss_pred ccCCCCcCC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCC-CcccccccccccCCCCCCCC
Q 003847 212 GSLPPDIGG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPES-NVFMNQESSSFSGNLDLCGQ 285 (791)
Q Consensus 212 ~~~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~lc~~ 285 (791)
...-+.+.+ ..|+.|+|++|+|. ++|.....++..|+.|+||+|+|+.. |++ ..+..+..+...+|.-+|-+
T Consensus 373 d~c~p~l~~~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~~L-p~tva~~~~L~tL~ahsN~l~~fP 446 (1081)
T KOG0618|consen 373 DSCFPVLVNFKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLTTL-PDTVANLGRLHTLRAHSNQLLSFP 446 (1081)
T ss_pred ccchhhhccccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhhhh-hHHHHhhhhhHHHhhcCCceeech
Confidence 644444444 68999999999998 99999998899999999999999854 444 44445555556666666643
No 459
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.37 E-value=4.7e-14 Score=152.02 Aligned_cols=180 Identities=28% Similarity=0.280 Sum_probs=135.8
Q ss_pred CCcEEEEEcCCCCCcc------CCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCC---ccEEEccCCcCCC----CCc
Q 003847 80 DSRVIGLALPNSQLLG------SIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQ---LRNLDLSNNLISG----HLP 146 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~------~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~L~~N~l~~----~~p 146 (791)
...++.|+++++.+.+ .++..|..+++|+.|+|++|.+.+..+..+..+.+ |++|+|++|++++ .+.
T Consensus 50 ~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~ 129 (319)
T cd00116 50 QPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLA 129 (319)
T ss_pred CCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHH
Confidence 4458888888888762 33456778899999999999998777777766666 9999999999983 344
Q ss_pred cccCCC-CCCCEEeCcCCcCCCC----CccccCCCCCCCEEeCCCCcCCCC----CCCCC---cccceeccccccccccC
Q 003847 147 ETMGSL-HNLQLLNLSDNALAGK----LPVSLTTLQSLTIVSLKNNYFSDG----LPSKF---NSVQVLDLSSNLINGSL 214 (791)
Q Consensus 147 ~~~~~l-~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~l---~~L~~L~ls~N~l~~~~ 214 (791)
..+..+ ++|+.|+|++|.+++. ++..+..+++|++|+|++|.+++. ++..+ ++|+.|+|++|.+++..
T Consensus 130 ~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~ 209 (319)
T cd00116 130 KGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEG 209 (319)
T ss_pred HHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHH
Confidence 556677 8999999999999843 344667788999999999999852 22223 58999999999987433
Q ss_pred CC----CcCC-ccccEEEccCCcCcccCchhHhhc----CCCCcEEEcccCcCc
Q 003847 215 PP----DIGG-YSLRYLNLSYNRLSGEIPPQFGEK----IPVNATIDLSFNNLT 259 (791)
Q Consensus 215 p~----~~~~-~~L~~L~l~~N~l~g~ip~~~~~~----l~~l~~l~l~~N~l~ 259 (791)
.. .+.. .+|++|++++|.+++.....+... .+.|+.|++++|.++
T Consensus 210 ~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~ 263 (319)
T cd00116 210 ASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDIT 263 (319)
T ss_pred HHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCC
Confidence 22 2222 479999999999986444444443 378999999999987
No 460
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.34 E-value=1.7e-12 Score=130.22 Aligned_cols=206 Identities=21% Similarity=0.244 Sum_probs=140.2
Q ss_pred HHHHhccCCCCccceeeEEEccC-----ceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc--
Q 003847 522 VRVIAKLVHPNLVRIRGFYWGVD-----EKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE-- 594 (791)
Q Consensus 522 ~~~l~~l~H~nIv~l~~~~~~~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~-- 594 (791)
...|-++.|.|||+++.|+.+.. ...+++|||+.|++..++++..... ..+......+|+-||+.||.|||+
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~-~a~~~~~wkkw~tqIlsal~yLhs~~ 196 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQ-KALFQKAWKKWCTQILSALSYLHSCD 196 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhh-hhhhHHHHHHHHHHHHhhhhhhhccC
Confidence 44556678999999999987543 4688999999999999998754322 247888899999999999999998
Q ss_pred CCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCC
Q 003847 595 KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGG 674 (791)
Q Consensus 595 ~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 674 (791)
..|+|+++.-+-|++..+|-+|+.----.. ....... . .....+...|
T Consensus 197 PpiihgnlTc~tifiq~ngLIkig~~ap~s-~h~s~~~---~----------------------------~~~Ek~~~~~ 244 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKIGSVAPDS-THPSVNS---T----------------------------REAEKSVNTS 244 (458)
T ss_pred CccccCCcchhheeecCCceEEecccCccc-cchhhhh---h----------------------------hHhhhhcccc
Confidence 689999999999999998888874221110 0000000 0 0001112236
Q ss_pred CCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcc-hhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHH
Q 003847 675 ISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVI-VVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCF 753 (791)
Q Consensus 675 t~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~p-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 753 (791)
-++|.|||.=.....+.++|||+||...+||..+..- -..... . .. .+.....+.+.-+ ..=.
T Consensus 245 ~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~-----~-~~----ee~ia~~i~~len------~lqr 308 (458)
T KOG1266|consen 245 LPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESK-----V-EV----EENIANVIIGLEN------GLQR 308 (458)
T ss_pred CCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcce-----e-eh----hhhhhhheeeccC------cccc
Confidence 7889999987777778899999999999999887652 111100 0 00 0111111111111 1113
Q ss_pred HHHhhccCCCCCCCCCHHHHHHH
Q 003847 754 KLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 754 ~li~~cl~~dP~~RPs~~evl~~ 776 (791)
+++..|++..|..||+|++++..
T Consensus 309 ~~i~kcl~~eP~~rp~ar~llfH 331 (458)
T KOG1266|consen 309 GSITKCLEGEPNGRPDARLLLFH 331 (458)
T ss_pred CcCcccccCCCCCCcchhhhhcC
Confidence 57889999999999999998754
No 461
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.33 E-value=6e-12 Score=122.16 Aligned_cols=127 Identities=17% Similarity=0.204 Sum_probs=97.1
Q ss_pred eeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCcc-ceeeEEEccCceEEEEeccCCCChh
Q 003847 481 YILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLV-RIRGFYWGVDEKLIIYDFVPNGSLA 559 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv-~l~~~~~~~~~~~lv~e~~~~gsL~ 559 (791)
+.++.|.++.||++... ++.|++|....... ....+++|+++++.+.+.+++ +++.+. ....++||||++|.++.
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~ 79 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELL 79 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCccc
Confidence 35788999999999875 78899999865532 123568899999988655544 455443 33468999999998876
Q ss_pred HHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-----eecCCCCCCeEecCCCCeEEeccCcccc
Q 003847 560 NARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKH-----VHGNLKPRNVLLGNDMEPKIGDFGLERL 625 (791)
Q Consensus 560 ~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~i-----vHrDlkp~NILl~~~~~~kL~DFGla~~ 625 (791)
+. . . ....++.+++++|+.||+.++ +|+|++|.||+++ ++.++++|||.+..
T Consensus 80 ~~----~------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 80 TE----D------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cc----c------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 42 0 1 113457899999999999875 9999999999999 66899999999875
No 462
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.31 E-value=3.7e-11 Score=132.38 Aligned_cols=166 Identities=21% Similarity=0.244 Sum_probs=127.2
Q ss_pred eCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCChhHHHHhhcCCCCCCCCH
Q 003847 496 LEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPW 575 (791)
Q Consensus 496 ~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~ 575 (791)
..++.+|.|+..+...........+-++.|+.++||||+++++.++..+..|+|+|-+. .|..++.+ +..
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~--------l~~ 103 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE--------LGK 103 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH--------hHH
Confidence 55788888888877655445567778899999999999999999999999999999984 56666665 345
Q ss_pred HHHHHHHHHHHHHHHHHhc-CCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCCccccCCcccccccccc
Q 003847 576 EARLKIAKGVARGLAFLHE-KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSF 654 (791)
Q Consensus 576 ~~~~~i~~qi~~gL~yLH~-~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (791)
..+.-.+.||+.||.|||+ .+++|++|.-+.|+++..|..||++|.++..........
T Consensus 104 ~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~--------------------- 162 (690)
T KOG1243|consen 104 EEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPA--------------------- 162 (690)
T ss_pred HHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCccc---------------------
Confidence 6677789999999999985 889999999999999999999999999876543211100
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCC
Q 003847 655 QDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~ 709 (791)
....--..|..|+.+.... -..|.|-||++++|++.|.
T Consensus 163 ---------------~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 163 ---------------KSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred ---------------ccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCcc
Confidence 0000111256666543322 3569999999999999993
No 463
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.30 E-value=3.2e-12 Score=143.47 Aligned_cols=141 Identities=14% Similarity=0.229 Sum_probs=92.1
Q ss_pred eeccccCceEEEEEEeCC-CcEEEEEEcCCCchhh----------------------------------HH------HHH
Q 003847 481 YILGASGSSIMYKAVLED-GTALAVRRIGENSVDR----------------------------------FR------DFE 519 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~----------------------------------~~------~~~ 519 (791)
+-||+|++|.||+|++++ |+.||||+.+..-... .+ ++.
T Consensus 125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~ 204 (537)
T PRK04750 125 KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLM 204 (537)
T ss_pred hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHH
Confidence 579999999999999877 9999999997541100 01 133
Q ss_pred HHHHHHhccC----CCCccceeeEEEc-cCceEEEEeccCCCChhHHHHhh-cCCCCCCCCHHHHHHHHHHHHHHHHHHh
Q 003847 520 TQVRVIAKLV----HPNLVRIRGFYWG-VDEKLIIYDFVPNGSLANARYRK-MGSSPCHLPWEARLKIAKGVARGLAFLH 593 (791)
Q Consensus 520 ~E~~~l~~l~----H~nIv~l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~l~~~~~~~i~~qi~~gL~yLH 593 (791)
+|+..+.+++ +...+.+-.+|.+ ....++||||++|+.+.++-.-. .+.....+....+..++.| ++
T Consensus 205 ~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q-------if 277 (537)
T PRK04750 205 REAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ-------VF 277 (537)
T ss_pred HHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH-------HH
Confidence 4444444442 3333433343433 34678999999999998743211 1100001222233333333 44
Q ss_pred cCCCeecCCCCCCeEecCCC----CeEEeccCcccccCC
Q 003847 594 EKKHVHGNLKPRNVLLGNDM----EPKIGDFGLERLVTG 628 (791)
Q Consensus 594 ~~~ivHrDlkp~NILl~~~~----~~kL~DFGla~~~~~ 628 (791)
..|++|+|+||.||+++.++ .++++|||++..+..
T Consensus 278 ~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 278 RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 69999999999999999888 999999999987754
No 464
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.28 E-value=3e-11 Score=117.96 Aligned_cols=136 Identities=14% Similarity=0.103 Sum_probs=100.3
Q ss_pred eeccccCceEEEEEEeCC-------CcEEEEEEcCCC-------------c---------hhhHHHH----HHHHHHHhc
Q 003847 481 YILGASGSSIMYKAVLED-------GTALAVRRIGEN-------------S---------VDRFRDF----ETQVRVIAK 527 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~-------g~~vavK~~~~~-------------~---------~~~~~~~----~~E~~~l~~ 527 (791)
..||.|--+.||.|...+ +..+|||+.+.. . ....+.+ ++|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 368999999999998543 579999987421 0 0112223 389999999
Q ss_pred cCC--CCccceeeEEEccCceEEEEeccCCCChhH-HHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHH-hcCCCeecCCC
Q 003847 528 LVH--PNLVRIRGFYWGVDEKLIIYDFVPNGSLAN-ARYRKMGSSPCHLPWEARLKIAKGVARGLAFL-HEKKHVHGNLK 603 (791)
Q Consensus 528 l~H--~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yL-H~~~ivHrDlk 603 (791)
+.. -++.+.+++ ...++||||+.++.+.. .+... .++..+...+..+++.+|.+| |+.||||+||+
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~------~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs 152 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA------KLNDEEMKNAYYQVLSMMKQLYKECNLVHADLS 152 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc------ccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 853 466677764 56789999997654432 12211 255566778899999999999 89999999999
Q ss_pred CCCeEecCCCCeEEeccCcccccC
Q 003847 604 PRNVLLGNDMEPKIGDFGLERLVT 627 (791)
Q Consensus 604 p~NILl~~~~~~kL~DFGla~~~~ 627 (791)
+.||+++ ++.++|+|||.+....
T Consensus 153 ~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 153 EYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred HHHEEEE-CCcEEEEECCCceeCC
Confidence 9999997 4689999999987664
No 465
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.25 E-value=4.8e-12 Score=140.64 Aligned_cols=177 Identities=36% Similarity=0.539 Sum_probs=109.9
Q ss_pred CcEEEEEcCCCCCccCCCcCCCCCC-CCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEe
Q 003847 81 SRVIGLALPNSQLLGSIPADLGMIE-FLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLN 159 (791)
Q Consensus 81 ~~v~~L~L~~~~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 159 (791)
..++.|++.+|+++ .+++..+.+. +|+.|++++|++. .+|..+.++++|+.|++++|+++ .+|...+.+++|+.|+
T Consensus 116 ~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ 192 (394)
T COG4886 116 TNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLD 192 (394)
T ss_pred cceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhhee
Confidence 34666777777665 4455555553 6777777777776 45555666777777777777776 5555555666777777
Q ss_pred CcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCC--CCCcccceeccccccccccCCCCcCC-ccccEEEccCCcCccc
Q 003847 160 LSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLP--SKFNSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGE 236 (791)
Q Consensus 160 ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p--~~l~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ 236 (791)
+++|+++ .+|.....+..|++|.+++|.+...+. ..+.++..|.+++|++. .++..++. .+|++|++++|+++ .
T Consensus 193 ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~-~ 269 (394)
T COG4886 193 LSGNKIS-DLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQIS-S 269 (394)
T ss_pred ccCCccc-cCchhhhhhhhhhhhhhcCCcceecchhhhhcccccccccCCceee-eccchhccccccceecccccccc-c
Confidence 7777776 566555555567777777774322111 23356666667777765 33444444 35777777777777 5
Q ss_pred CchhHhhcCCCCcEEEcccCcCcccCCCC
Q 003847 237 IPPQFGEKIPVNATIDLSFNNLTGEIPES 265 (791)
Q Consensus 237 ip~~~~~~l~~l~~l~l~~N~l~~~~p~~ 265 (791)
++. ++. +.+++.|++++|.++..+|..
T Consensus 270 i~~-~~~-~~~l~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 270 ISS-LGS-LTNLRELDLSGNSLSNALPLI 296 (394)
T ss_pred ccc-ccc-cCccCEEeccCccccccchhh
Confidence 555 433 677777777777776655543
No 466
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.18 E-value=9.8e-12 Score=135.89 Aligned_cols=241 Identities=22% Similarity=0.178 Sum_probs=171.9
Q ss_pred eeccccCceEEEEEEe--CCCcEEEEEEcCCCchhhHH--HHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEeccCC
Q 003847 481 YILGASGSSIMYKAVL--EDGTALAVRRIGENSVDRFR--DFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~--~~g~~vavK~~~~~~~~~~~--~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
..||.|.|+.||+... .++..|++|.+......... .-..|+.+...+ .|.++++++..|......|+--|||++
T Consensus 271 ~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~ 350 (524)
T KOG0601|consen 271 SKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEG 350 (524)
T ss_pred EEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhhcC
Confidence 4789999999999873 46889999998765322222 223466666655 599999999888888888999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCC-CCeEEeccCcccccCCCCCCCc
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGND-MEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~-~~~kL~DFGla~~~~~~~~~~~ 634 (791)
+++...+.... .+.+..++++..|++.++.++|+..++|+|+||+||++..+ +..++.|||.+..+.-....
T Consensus 351 ~s~~l~~~~~~-----~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~~-- 423 (524)
T KOG0601|consen 351 GSSSLRSVTSQ-----MLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSSGV-- 423 (524)
T ss_pred cchhhhhHHHH-----hcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccccceeccc--
Confidence 99877653222 27778899999999999999999999999999999999876 77899999998643211000
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcc-cCcccccCCCCCCchhhHHHHHHHHHHHhCCcc-h
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPY-HAPESLRSIKPNPKWDVYSFGVILLELLTGKVI-V 712 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y-~APE~~~~~~~~~~sDvwSlGvil~elltG~~p-f 712 (791)
...++..| .+++......+..+.|+||||..+.|.++|... .
T Consensus 424 ------------------------------------~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~ 467 (524)
T KOG0601|consen 424 ------------------------------------FHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSE 467 (524)
T ss_pred ------------------------------------ccccccccccchhhccccccccccccccccccccccccCcccCc
Confidence 00123334 356666677788999999999999999998762 2
Q ss_pred hccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 713 VDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
... .|.. +. .+..+........+..+...++..++..||.+.++....+.+.
T Consensus 468 ~~~--~~~~--i~-------------~~~~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 468 SGV--QSLT--IR-------------SGDTPNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred ccc--ccee--ee-------------cccccCCCchHHhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence 111 1110 00 1111111123356677888999999999999998877655443
No 467
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.17 E-value=2.5e-10 Score=107.19 Aligned_cols=131 Identities=22% Similarity=0.310 Sum_probs=100.5
Q ss_pred eccccCceEEEEEEeCCCcEEEEEE-cCCC--ch-----hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEecc
Q 003847 482 ILGASGSSIMYKAVLEDGTALAVRR-IGEN--SV-----DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~~~~g~~vavK~-~~~~--~~-----~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
++++|+-+.+|.+.+. |..+++|. +++. .+ -..++-.+|++++.+++--.|.-.+=+..+.+...|+|||+
T Consensus 3 ~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 5789999999999764 44466664 3332 11 12345678999999987666665555666888889999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCccccc
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLV 626 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 626 (791)
+|..|.+.+... ...++..+-.-+.-||..||||+||.++||++..+. +.++|||++..-
T Consensus 82 ~G~~lkd~l~~~------------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 82 EGELLKDALEEA------------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred CChhHHHHHHhc------------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCccccc
Confidence 999998887654 245677788888999999999999999999997664 999999998753
No 468
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.17 E-value=1.3e-12 Score=139.85 Aligned_cols=186 Identities=30% Similarity=0.401 Sum_probs=150.6
Q ss_pred EEcCCCCCccCCC-cCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCc
Q 003847 86 LALPNSQLLGSIP-ADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNA 164 (791)
Q Consensus 86 L~L~~~~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~ 164 (791)
|.|++-.+....- .+=-.|+.-...||+.|++. .+|.++..+..|+.|.|++|.|. .+|..+++|..|++|||+.|+
T Consensus 55 l~Ls~rrlk~fpr~a~~~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~Nq 132 (722)
T KOG0532|consen 55 LLLSGRRLKEFPRGAASYDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQ 132 (722)
T ss_pred cccccchhhcCCCccccccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccch
Confidence 4555555543322 22245677788999999999 89999999999999999999998 899999999999999999999
Q ss_pred CCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC---cccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCchh
Q 003847 165 LAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIPPQ 240 (791)
Q Consensus 165 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~~ 240 (791)
++ .+|..+..|+ |+.|.+++|+++. +|..+ ..|..||.+.|.|. .+|..++. .+|+.|++..|++. .+|++
T Consensus 133 lS-~lp~~lC~lp-Lkvli~sNNkl~~-lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~E 207 (722)
T KOG0532|consen 133 LS-HLPDGLCDLP-LKVLIVSNNKLTS-LPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEE 207 (722)
T ss_pred hh-cCChhhhcCc-ceeEEEecCcccc-CCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHH
Confidence 99 8888887774 8999999999986 44433 78999999999998 67777666 59999999999999 89999
Q ss_pred HhhcCCCCcEEEcccCcCcccCCCCC-cccccccccccCCCC
Q 003847 241 FGEKIPVNATIDLSFNNLTGEIPESN-VFMNQESSSFSGNLD 281 (791)
Q Consensus 241 ~~~~l~~l~~l~l~~N~l~~~~p~~~-~~~~~~~~~~~~n~~ 281 (791)
+.. |+ |..||+|.|+++ .+|-.. .+..+..+.+.+||.
T Consensus 208 l~~-Lp-Li~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPL 246 (722)
T KOG0532|consen 208 LCS-LP-LIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPL 246 (722)
T ss_pred HhC-Cc-eeeeecccCcee-ecchhhhhhhhheeeeeccCCC
Confidence 883 64 778999999998 456554 444556666667764
No 469
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.15 E-value=5e-10 Score=104.48 Aligned_cols=143 Identities=17% Similarity=0.276 Sum_probs=107.4
Q ss_pred eeccccCceEEEEEEeCCCcEEEEEE-cCCC-------chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEec
Q 003847 481 YILGASGSSIMYKAVLEDGTALAVRR-IGEN-------SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDF 552 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~g~~vavK~-~~~~-------~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 552 (791)
.++-+|+-+.|+++... |+...||. +.+. ..-..++..+|+++|.++.--.|.-..=++.+...-.|+|||
T Consensus 13 ~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~ 91 (229)
T KOG3087|consen 13 ELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEF 91 (229)
T ss_pred eeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEe
Confidence 57889999999999875 77777764 3221 111235677899999998765665555566677777899999
Q ss_pred cCC-CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCC---eEEeccCcccccC
Q 003847 553 VPN-GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDME---PKIGDFGLERLVT 627 (791)
Q Consensus 553 ~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~---~kL~DFGla~~~~ 627 (791)
++| .++.+++....... ...+....++.+|-+.+.-||..+|+|+||..+||++..++. +.++|||++..-.
T Consensus 92 ~~g~~~vk~~i~~~~~~~---~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s~ 167 (229)
T KOG3087|consen 92 IDGASTVKDFILSTMEDE---SEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVSR 167 (229)
T ss_pred ccchhHHHHHHHHHccCc---ccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhccc
Confidence 976 48888887765432 233334788999999999999999999999999999965543 5899999987643
No 470
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.13 E-value=2.8e-10 Score=115.65 Aligned_cols=139 Identities=23% Similarity=0.278 Sum_probs=108.3
Q ss_pred eeccccCceEEEEEEeCCCcEEEEEEcCCCch-hhHHHHHHHHHHHhccCCC--CccceeeEEEccC---ceEEEEeccC
Q 003847 481 YILGASGSSIMYKAVLEDGTALAVRRIGENSV-DRFRDFETQVRVIAKLVHP--NLVRIRGFYWGVD---EKLIIYDFVP 554 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~H~--nIv~l~~~~~~~~---~~~lv~e~~~ 554 (791)
+.||.|..+.||++...+|+.+++|....... .....+..|+++++.+.+. .+.+++.+..... ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 46889999999999987778999999865432 1345789999999999753 4577777766542 5689999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc----------------------------------------
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE---------------------------------------- 594 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~---------------------------------------- 594 (791)
|.++.+.+.. . .++..+...++.+++++|.+||+
T Consensus 84 G~~l~~~~~~-~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 84 GRVLRDRLLR-P-----ELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred CEecCCCCCC-C-----CCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 9988765431 1 26777788888888888888884
Q ss_pred ----------------CCCeecCCCCCCeEecC--CCCeEEeccCcccc
Q 003847 595 ----------------KKHVHGNLKPRNVLLGN--DMEPKIGDFGLERL 625 (791)
Q Consensus 595 ----------------~~ivHrDlkp~NILl~~--~~~~kL~DFGla~~ 625 (791)
..++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 23589999999999998 56689999998874
No 471
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.12 E-value=4.9e-11 Score=132.57 Aligned_cols=189 Identities=33% Similarity=0.418 Sum_probs=151.5
Q ss_pred EEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCC-CccEEEccCCcCCCCCccccCCCCCCCEEeCcCC
Q 003847 85 GLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNAS-QLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDN 163 (791)
Q Consensus 85 ~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 163 (791)
.|.+..+.+...+ ..+..++.++.|++.+|.++ .+|.....+. +|+.|++++|++. .+|..++.+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~~~-~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSNI-SELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccCc-hhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 5788888774333 34556689999999999999 6777777775 9999999999998 78788999999999999999
Q ss_pred cCCCCCccccCCCCCCCEEeCCCCcCCCCCCC--CCcccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCchh
Q 003847 164 ALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPS--KFNSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIPPQ 240 (791)
Q Consensus 164 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~--~l~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~~ 240 (791)
+++ .+|.....+++|+.|++++|+++...+. ....|++|++++|.+. .++..+.. .++..|.+.+|++. .++..
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~ 250 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKISDLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPES 250 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccccCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccch
Confidence 999 7777777899999999999999985554 3356999999999654 44444544 57889999999998 55666
Q ss_pred HhhcCCCCcEEEcccCcCcccCCCCCcccccccccccCCCC
Q 003847 241 FGEKIPVNATIDLSFNNLTGEIPESNVFMNQESSSFSGNLD 281 (791)
Q Consensus 241 ~~~~l~~l~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~ 281 (791)
+.. +++++.|++++|+++...+ .....++..+.+.+|..
T Consensus 251 ~~~-l~~l~~L~~s~n~i~~i~~-~~~~~~l~~L~~s~n~~ 289 (394)
T COG4886 251 IGN-LSNLETLDLSNNQISSISS-LGSLTNLRELDLSGNSL 289 (394)
T ss_pred hcc-ccccceecccccccccccc-ccccCccCEEeccCccc
Confidence 665 8899999999999985544 55566666677767653
No 472
>PLN03150 hypothetical protein; Provisional
Probab=99.11 E-value=7.2e-11 Score=137.44 Aligned_cols=89 Identities=33% Similarity=0.671 Sum_probs=58.8
Q ss_pred ccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC---cccceecccc
Q 003847 131 LRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSS 207 (791)
Q Consensus 131 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~ 207 (791)
++.|+|++|.|+|.+|..++.|++|+.|+|++|+|.|.+|..+..+++|+.|+|++|+|+|.+|..+ ++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 5566666666666666666666666666666666666666666666666666666666666666543 5666667777
Q ss_pred ccccccCCCCcC
Q 003847 208 NLINGSLPPDIG 219 (791)
Q Consensus 208 N~l~~~~p~~~~ 219 (791)
|+|+|.+|..++
T Consensus 500 N~l~g~iP~~l~ 511 (623)
T PLN03150 500 NSLSGRVPAALG 511 (623)
T ss_pred CcccccCChHHh
Confidence 777777776654
No 473
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.10 E-value=1.6e-09 Score=112.01 Aligned_cols=149 Identities=14% Similarity=0.072 Sum_probs=106.4
Q ss_pred HHHhhhcceeccccCceEEEEEEeCCCcEEEEEEcCCCchh-hHH----------HHHHHHHHHhccCCCCc--cceeeE
Q 003847 473 ETLLKASAYILGASGSSIMYKAVLEDGTALAVRRIGENSVD-RFR----------DFETQVRVIAKLVHPNL--VRIRGF 539 (791)
Q Consensus 473 ~~~~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-~~~----------~~~~E~~~l~~l~H~nI--v~l~~~ 539 (791)
+.+.....+++-.-....|+++.. +|+.|.||+....... ..+ .+.+|.+.+.++...+| ++.+++
T Consensus 20 ~~~~~~~~e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~ 98 (268)
T PRK15123 20 EEVKTLQGEVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAF 98 (268)
T ss_pred HHHHhcCCcEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEE
Confidence 344444445555555555777766 5788999987543321 111 47789999988854443 445555
Q ss_pred EEc-----cCceEEEEeccCCC-ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecC--
Q 003847 540 YWG-----VDEKLIIYDFVPNG-SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN-- 611 (791)
Q Consensus 540 ~~~-----~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~-- 611 (791)
.+. ....++|||++++. +|.+++...... +.+...+..++.+++..+.-||..||+|+|+++.|||++.
T Consensus 99 ~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~---~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~ 175 (268)
T PRK15123 99 GERGSNPATRTSFIITEDLAPTISLEDYCADWATN---PPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPF 175 (268)
T ss_pred EEecCCCccceeEEEEeeCCCCccHHHHHHhhccc---CCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccc
Confidence 543 23478999999876 898887543221 2566778899999999999999999999999999999975
Q ss_pred -----CCCeEEeccCcccc
Q 003847 612 -----DMEPKIGDFGLERL 625 (791)
Q Consensus 612 -----~~~~kL~DFGla~~ 625 (791)
++.+.++||+.+..
T Consensus 176 ~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 176 PGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred cCCCCCceEEEEECCcccc
Confidence 46799999998864
No 474
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.04 E-value=1.2e-10 Score=111.41 Aligned_cols=104 Identities=37% Similarity=0.481 Sum_probs=25.1
Q ss_pred cEEEEEcCCCCCccCCCcCCC-CCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCcccc-CCCCCCCEEe
Q 003847 82 RVIGLALPNSQLLGSIPADLG-MIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETM-GSLHNLQLLN 159 (791)
Q Consensus 82 ~v~~L~L~~~~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~ 159 (791)
+++.|+|.+|+|+.+ +.++ .|.+|+.|+|++|.|+. ++ .+..+++|++|+|++|+|+ .+.+.+ ..+++|++|+
T Consensus 20 ~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 20 KLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQELY 94 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT--EEE
T ss_pred ccccccccccccccc--cchhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCC-ccccchHHhCCcCCEEE
Confidence 445555555555432 2343 35555555555555552 22 2444555555555555555 232222 2355555555
Q ss_pred CcCCcCCCCC-ccccCCCCCCCEEeCCCCcCC
Q 003847 160 LSDNALAGKL-PVSLTTLQSLTIVSLKNNYFS 190 (791)
Q Consensus 160 ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~ 190 (791)
|++|+|...- -..+..+++|+.|+|.+|.++
T Consensus 95 L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 95 LSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp -TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 5555554211 123444555555555555554
No 475
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.04 E-value=7.5e-11 Score=135.18 Aligned_cols=266 Identities=21% Similarity=0.237 Sum_probs=164.4
Q ss_pred ccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 483 LGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 483 lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
+-+|.++.++.+.- ..|...+.|...... ..+.+....+-.++-..+||-+++..-.+......+++++|+.+++|
T Consensus 812 ~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~~~~~~~~~ 891 (1205)
T KOG0606|consen 812 SQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVGHYLNGGDL 891 (1205)
T ss_pred ccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhhHHhccCCc
Confidence 44566676666652 224334444432211 11112222222222233456666555545556788999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
...++.... .+.+-.+.....+..+++|||...++|||++|.|++...++..++.|||......--.......+.
T Consensus 892 ~Skl~~~~~-----~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~ 966 (1205)
T KOG0606|consen 892 PSKLHNSGC-----LSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGP 966 (1205)
T ss_pred hhhhhcCCC-----cccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccCcCCcccc
Confidence 988876552 455556667778889999999999999999999999999999999999965543322111111000
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccccC
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQ 718 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~ 718 (791)
. +.+..+.... ..+. ...............||+.|.+||...+......+|.|++|++++|.++|.+||.....+
T Consensus 967 ~-~~~~~~~~~~--~~~~--~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq 1041 (1205)
T KOG0606|consen 967 S-SSGTPRRLSR--SERR--PQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQ 1041 (1205)
T ss_pred c-ccCccccccc--cccc--cccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchh
Confidence 0 0000000000 0000 000000112234567999999999999999999999999999999999999999765332
Q ss_pred CCCcchhchhHHHHHHHHhhhcCc---cchHHHHHHHHHHHhhccCCCCCCCCCHH
Q 003847 719 GNGLLVEDKNRAIRLADAAIRADF---EGKEEALLSCFKLGYSCASPLPQKRPSMK 771 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 771 (791)
++++....+.. ....+......+++...+..+|.+|-.|.
T Consensus 1042 -------------~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1042 -------------QIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred -------------hhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 22232222222 12333556778888899999999997765
No 476
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.02 E-value=2.2e-11 Score=120.59 Aligned_cols=129 Identities=31% Similarity=0.502 Sum_probs=102.8
Q ss_pred CCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCC--CCCCcccceec
Q 003847 127 NASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGL--PSKFNSVQVLD 204 (791)
Q Consensus 127 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--p~~l~~L~~L~ 204 (791)
....|++||||+|.|+ .+.+++.-++.++.|++|+|.|. .+- .++.|.+|+.|||++|.++... -..+.+.++|.
T Consensus 282 TWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~-nLa~L~~L~~LDLS~N~Ls~~~Gwh~KLGNIKtL~ 358 (490)
T KOG1259|consen 282 TWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQ-NLAELPQLQLLDLSGNLLAECVGWHLKLGNIKTLK 358 (490)
T ss_pred hHhhhhhccccccchh-hhhhhhhhccceeEEecccccee-eeh-hhhhcccceEeecccchhHhhhhhHhhhcCEeeee
Confidence 3467999999999998 88888888999999999999998 343 4889999999999999988633 34568899999
Q ss_pred cccccccccCCCCcCC-ccccEEEccCCcCcccCch--hHhhcCCCCcEEEcccCcCcccC
Q 003847 205 LSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIPP--QFGEKIPVNATIDLSFNNLTGEI 262 (791)
Q Consensus 205 ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~--~~~~~l~~l~~l~l~~N~l~~~~ 262 (791)
|+.|.|. .+. .++. .+|.+||+++|+|. .+.. .+++ +|.|+.|.|.+|+|.+.+
T Consensus 359 La~N~iE-~LS-GL~KLYSLvnLDl~~N~Ie-~ldeV~~IG~-LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 359 LAQNKIE-TLS-GLRKLYSLVNLDLSSNQIE-ELDEVNHIGN-LPCLETLRLTGNPLAGSV 415 (490)
T ss_pred hhhhhHh-hhh-hhHhhhhheeccccccchh-hHHHhccccc-ccHHHHHhhcCCCccccc
Confidence 9999986 222 1222 48999999999997 4332 3455 899999999999998654
No 477
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.01 E-value=2.1e-09 Score=104.73 Aligned_cols=126 Identities=19% Similarity=0.251 Sum_probs=85.6
Q ss_pred EEEEEEeCCCcEEEEEEcCCC---------------c------h-----hhHHHHHHHHHHHhccCCC--CccceeeEEE
Q 003847 490 IMYKAVLEDGTALAVRRIGEN---------------S------V-----DRFRDFETQVRVIAKLVHP--NLVRIRGFYW 541 (791)
Q Consensus 490 ~Vy~~~~~~g~~vavK~~~~~---------------~------~-----~~~~~~~~E~~~l~~l~H~--nIv~l~~~~~ 541 (791)
.||.|...+|..+|||+.+.. . . ......++|++.|.++..- ++.+.+++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 389999888999999987421 0 0 0123467899999999765 566776542
Q ss_pred ccCceEEEEeccC--CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHH-HhcCCCeecCCCCCCeEecCCCCeEEe
Q 003847 542 GVDEKLIIYDFVP--NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAF-LHEKKHVHGNLKPRNVLLGNDMEPKIG 618 (791)
Q Consensus 542 ~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~y-LH~~~ivHrDlkp~NILl~~~~~~kL~ 618 (791)
..++||||++ |..+..+.... ++.+....++.+++..+.. +|..||+|+||.+.||+++++ .+.++
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~-------~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iI 148 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD-------LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYII 148 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG-------GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE-
T ss_pred ---CCEEEEEecCCCccchhhHHhcc-------ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEE
Confidence 4579999998 65565443322 2234456778888886655 579999999999999999887 99999
Q ss_pred ccCcccccC
Q 003847 619 DFGLERLVT 627 (791)
Q Consensus 619 DFGla~~~~ 627 (791)
|||.+....
T Consensus 149 Df~qav~~~ 157 (188)
T PF01163_consen 149 DFGQAVDSS 157 (188)
T ss_dssp -GTTEEETT
T ss_pred ecCcceecC
Confidence 999987654
No 478
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.99 E-value=7.7e-09 Score=110.67 Aligned_cols=140 Identities=20% Similarity=0.283 Sum_probs=109.6
Q ss_pred ceEEEEEE-eCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEc----cCceEEEEeccCC-CChhHH
Q 003847 488 SSIMYKAV-LEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG----VDEKLIIYDFVPN-GSLANA 561 (791)
Q Consensus 488 ~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----~~~~~lv~e~~~~-gsL~~~ 561 (791)
-.+.||+. ..||..|++|+++.........-..-+++++++.|.|||++.++|.. +...++||+|.++ ++|.++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 45789998 56899999999954433222233445789999999999999998873 3467899999875 577775
Q ss_pred HHhhcCC----------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccC
Q 003847 562 RYRKMGS----------SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVT 627 (791)
Q Consensus 562 l~~~~~~----------~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~ 627 (791)
-...... .+...++...+.++.|+..||.++|+.|+.-+-|.|.+|+++.+.+++|+..|....+.
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~ 444 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQ 444 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeec
Confidence 4332211 12357889999999999999999999999999999999999999999999888876554
No 479
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.97 E-value=2.6e-10 Score=109.21 Aligned_cols=86 Identities=33% Similarity=0.414 Sum_probs=24.8
Q ss_pred CCCCCCCCEEeCcCCCCCCCCccccc-CCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCCcccc-CCCCC
Q 003847 101 LGMIEFLQYLDLSNNSLNGSLSFSLF-NASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSL-TTLQS 178 (791)
Q Consensus 101 ~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~-~~l~~ 178 (791)
+.+...+++|+|++|+|+. +. .++ .+.+|+.|||++|.|+ .++ .+..+++|+.|+|++|+|+. +...+ ..+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~-Ie-~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIST-IE-NLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRISS-ISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-TT
T ss_pred ccccccccccccccccccc-cc-chhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCCc-cccchHHhCCc
Confidence 4555677888888888873 32 354 4678888888888887 343 36777888888888888874 43333 35778
Q ss_pred CCEEeCCCCcCCC
Q 003847 179 LTIVSLKNNYFSD 191 (791)
Q Consensus 179 L~~L~L~~N~l~~ 191 (791)
|++|+|++|+|..
T Consensus 90 L~~L~L~~N~I~~ 102 (175)
T PF14580_consen 90 LQELYLSNNKISD 102 (175)
T ss_dssp --EEE-TTS---S
T ss_pred CCEEECcCCcCCC
Confidence 8888888887765
No 480
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.93 E-value=9.3e-11 Score=116.21 Aligned_cols=134 Identities=33% Similarity=0.276 Sum_probs=107.8
Q ss_pred CCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCE
Q 003847 102 GMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTI 181 (791)
Q Consensus 102 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~ 181 (791)
..-..|++||||+|.|+ .+..+..-+++++.|+||+|.|. .+.. +..|++|+.||||+|.++ .+.++-..|.+.+.
T Consensus 281 dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~n-La~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKt 356 (490)
T KOG1259|consen 281 DTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQN-LAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKT 356 (490)
T ss_pred chHhhhhhccccccchh-hhhhhhhhccceeEEecccccee-eehh-hhhcccceEeecccchhH-hhhhhHhhhcCEee
Confidence 33456999999999998 67777888899999999999998 4444 889999999999999999 66677778899999
Q ss_pred EeCCCCcCCCC-CCCCCcccceeccccccccccC-CCCcCC-ccccEEEccCCcCcccCchh
Q 003847 182 VSLKNNYFSDG-LPSKFNSVQVLDLSSNLINGSL-PPDIGG-YSLRYLNLSYNRLSGEIPPQ 240 (791)
Q Consensus 182 L~L~~N~l~~~-~p~~l~~L~~L~ls~N~l~~~~-p~~~~~-~~L~~L~l~~N~l~g~ip~~ 240 (791)
|.|+.|.|... -...+-+|..||+++|+|.... -..++. +.|++|.|.+|.|. .+|+.
T Consensus 357 L~La~N~iE~LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~-~~vdY 417 (490)
T KOG1259|consen 357 LKLAQNKIETLSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLA-GSVDY 417 (490)
T ss_pred eehhhhhHhhhhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcc-ccchH
Confidence 99999988752 1234578999999999997321 234555 57999999999999 44443
No 481
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.89 E-value=2.4e-10 Score=119.33 Aligned_cols=180 Identities=23% Similarity=0.178 Sum_probs=113.5
Q ss_pred CCcEEEEEcCCCCCccCCC-cCCCCCCCCCEEeCcCCCCCCCCc--ccccCCCCccEEEccCCcCCCCCccc-cCCCCCC
Q 003847 80 DSRVIGLALPNSQLLGSIP-ADLGMIEFLQYLDLSNNSLNGSLS--FSLFNASQLRNLDLSNNLISGHLPET-MGSLHNL 155 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L 155 (791)
...+..+.|.+....-... .....|++++.||||.|-|....| .....|++|+.|+|+.|+|.-..... -..++.|
T Consensus 120 ~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~l 199 (505)
T KOG3207|consen 120 LKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHL 199 (505)
T ss_pred HHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhh
Confidence 4566667777666532111 356678888888888888874432 33457888888888888887333222 2356778
Q ss_pred CEEeCcCCcCCCC-CccccCCCCCCCEEeCCCCcCCC--CCCC-CCcccceeccccccccccC--CCCcCCccccEEEcc
Q 003847 156 QLLNLSDNALAGK-LPVSLTTLQSLTIVSLKNNYFSD--GLPS-KFNSVQVLDLSSNLINGSL--PPDIGGYSLRYLNLS 229 (791)
Q Consensus 156 ~~L~ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~--~~p~-~l~~L~~L~ls~N~l~~~~--p~~~~~~~L~~L~l~ 229 (791)
+.|.|+.+.|+-. +-..+..+++|+.|+|..|.... ..+. .+..|+.|||++|++-... +.....+.|+.|+++
T Consensus 200 K~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls 279 (505)
T KOG3207|consen 200 KQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLS 279 (505)
T ss_pred heEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhcc
Confidence 8888888888722 12234467888888888885221 1222 2367888888888876322 111122467888888
Q ss_pred CCcCccc-Cchh----HhhcCCCCcEEEcccCcCc
Q 003847 230 YNRLSGE-IPPQ----FGEKIPVNATIDLSFNNLT 259 (791)
Q Consensus 230 ~N~l~g~-ip~~----~~~~l~~l~~l~l~~N~l~ 259 (791)
.+.++.. +|+. ....+++|++|+++.|++.
T Consensus 280 ~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~ 314 (505)
T KOG3207|consen 280 STGIASIAEPDVESLDKTHTFPKLEYLNISENNIR 314 (505)
T ss_pred ccCcchhcCCCccchhhhcccccceeeecccCccc
Confidence 8877621 2332 1234788889999998884
No 482
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.84 E-value=1.5e-09 Score=85.48 Aligned_cols=59 Identities=42% Similarity=0.524 Sum_probs=26.7
Q ss_pred CCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCc
Q 003847 106 FLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNA 164 (791)
Q Consensus 106 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~ 164 (791)
+|++|+|++|+|+...+..|.++++|++|+|++|+|+...|..|.++++|++|+|++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34444444444443333444444444444444444443333444444444444444443
No 483
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.82 E-value=2.1e-09 Score=84.55 Aligned_cols=61 Identities=36% Similarity=0.561 Sum_probs=55.6
Q ss_pred CCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcC
Q 003847 129 SQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYF 189 (791)
Q Consensus 129 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 189 (791)
++|++|+|++|+|+...+..|.++++|++|+|++|+++...|..|.++++|++|+|++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 5799999999999977778899999999999999999988888999999999999999975
No 484
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.82 E-value=9e-10 Score=122.73 Aligned_cols=172 Identities=30% Similarity=0.273 Sum_probs=106.5
Q ss_pred CCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEe
Q 003847 80 DSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLN 159 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 159 (791)
...+..|+|.+|+|..+.. .+..+++|++|+|++|.|+...+ +..++.|+.|++++|.|+ .+. .+..+.+|+.++
T Consensus 94 ~~~l~~l~l~~n~i~~i~~-~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~l~~N~i~-~~~-~~~~l~~L~~l~ 168 (414)
T KOG0531|consen 94 LKSLEALDLYDNKIEKIEN-LLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKELNLSGNLIS-DIS-GLESLKSLKLLD 168 (414)
T ss_pred ccceeeeeccccchhhccc-chhhhhcchheeccccccccccc--hhhccchhhheeccCcch-hcc-CCccchhhhccc
Confidence 4567777777777764432 25667777777777777764433 455666777777777776 222 244567777777
Q ss_pred CcCCcCCCCCc-cccCCCCCCCEEeCCCCcCCCCCCC-CCcccceeccccccccccCCCCcCCcc--ccEEEccCCcCcc
Q 003847 160 LSDNALAGKLP-VSLTTLQSLTIVSLKNNYFSDGLPS-KFNSVQVLDLSSNLINGSLPPDIGGYS--LRYLNLSYNRLSG 235 (791)
Q Consensus 160 ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~-~l~~L~~L~ls~N~l~~~~p~~~~~~~--L~~L~l~~N~l~g 235 (791)
+++|++...-+ . +..+.+|+.+++.+|.+...-.- .+..+..+++..|.++. +-....... |+.+++++|.+.
T Consensus 169 l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i~~~~~~~~l~~~~l~~n~i~~-~~~l~~~~~~~L~~l~l~~n~i~- 245 (414)
T KOG0531|consen 169 LSYNRIVDIENDE-LSELISLEELDLGGNSIREIEGLDLLKKLVLLSLLDNKISK-LEGLNELVMLHLRELYLSGNRIS- 245 (414)
T ss_pred CCcchhhhhhhhh-hhhccchHHHhccCCchhcccchHHHHHHHHhhccccccee-ccCcccchhHHHHHHhcccCccc-
Confidence 77777773333 2 45667777777777776643322 22455555777777762 222222222 778888888887
Q ss_pred cCchhHhhcCCCCcEEEcccCcCcc
Q 003847 236 EIPPQFGEKIPVNATIDLSFNNLTG 260 (791)
Q Consensus 236 ~ip~~~~~~l~~l~~l~l~~N~l~~ 260 (791)
.++..+.. +..+..|++.+|++..
T Consensus 246 ~~~~~~~~-~~~l~~l~~~~n~~~~ 269 (414)
T KOG0531|consen 246 RSPEGLEN-LKNLPVLDLSSNRISN 269 (414)
T ss_pred cccccccc-cccccccchhhccccc
Confidence 55444443 7777788888887763
No 485
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.81 E-value=3.6e-08 Score=98.40 Aligned_cols=138 Identities=17% Similarity=0.203 Sum_probs=104.4
Q ss_pred hhhcceeccccCceEEEEEEeCCCcEEEEEEcCCC--------------------c--hhhHHHHHHHHHHHhccCCC--
Q 003847 476 LKASAYILGASGSSIMYKAVLEDGTALAVRRIGEN--------------------S--VDRFRDFETQVRVIAKLVHP-- 531 (791)
Q Consensus 476 ~~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~--------------------~--~~~~~~~~~E~~~l~~l~H~-- 531 (791)
..+.+..||-|--+.||.|....|.++|||.-+.. + .......++|.++|.+|.-.
T Consensus 92 ve~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 92 VEAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HHhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 44567899999999999999999999999974211 0 00123467899999999654
Q ss_pred CccceeeEEEccCceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecC
Q 003847 532 NLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN 611 (791)
Q Consensus 532 nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~ 611 (791)
.+.+.+++ +...+||||++|--|...- ++.+....|+..|++-+.-+-..||||+|+.+-||++++
T Consensus 172 ~VP~P~~~----nRHaVvMe~ieG~eL~~~r----------~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~ 237 (304)
T COG0478 172 KVPKPIAW----NRHAVVMEYIEGVELYRLR----------LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTE 237 (304)
T ss_pred CCCCcccc----ccceeeeehcccceeeccc----------CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEec
Confidence 67777654 4668999999987765421 223444556666666666666899999999999999999
Q ss_pred CCCeEEeccCcccccC
Q 003847 612 DMEPKIGDFGLERLVT 627 (791)
Q Consensus 612 ~~~~kL~DFGla~~~~ 627 (791)
+|.+.++||-.+....
T Consensus 238 dg~~~vIDwPQ~v~~~ 253 (304)
T COG0478 238 DGDIVVIDWPQAVPIS 253 (304)
T ss_pred CCCEEEEeCcccccCC
Confidence 9999999998877654
No 486
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.78 E-value=8e-10 Score=115.43 Aligned_cols=155 Identities=26% Similarity=0.225 Sum_probs=81.8
Q ss_pred CCcEEEEEcCCCCCccCCC--cCCCCCCCCCEEeCcCCCCCCCCcccc-cCCCCccEEEccCCcCCC-CCccccCCCCCC
Q 003847 80 DSRVIGLALPNSQLLGSIP--ADLGMIEFLQYLDLSNNSLNGSLSFSL-FNASQLRNLDLSNNLISG-HLPETMGSLHNL 155 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~~~--~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L 155 (791)
..+|+.|||+.|-+....+ .-...|++|+.|+|+.|++.-...... ..+++|+.|.|+.+.|+- .+-..+..+++|
T Consensus 145 ~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl 224 (505)
T KOG3207|consen 145 LPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSL 224 (505)
T ss_pred CCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcH
Confidence 4566666666665544322 234556666666666666652222111 235666666666666651 122334456666
Q ss_pred CEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCC----CCCCcccceeccccccccc-cCCCC------cCCcccc
Q 003847 156 QLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGL----PSKFNSVQVLDLSSNLING-SLPPD------IGGYSLR 224 (791)
Q Consensus 156 ~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~----p~~l~~L~~L~ls~N~l~~-~~p~~------~~~~~L~ 224 (791)
+.|+|..|..-+.--.....+..|++|+|++|++-... -..|+.|+.|+++.+.+.. .+|+. ....+|+
T Consensus 225 ~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~ 304 (505)
T KOG3207|consen 225 EVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLE 304 (505)
T ss_pred HHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccce
Confidence 66666666432233334445566666666666665422 1234666666666666653 12222 1113566
Q ss_pred EEEccCCcCc
Q 003847 225 YLNLSYNRLS 234 (791)
Q Consensus 225 ~L~l~~N~l~ 234 (791)
+|+++.|++.
T Consensus 305 ~L~i~~N~I~ 314 (505)
T KOG3207|consen 305 YLNISENNIR 314 (505)
T ss_pred eeecccCccc
Confidence 6666666664
No 487
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.78 E-value=5.4e-09 Score=75.40 Aligned_cols=41 Identities=56% Similarity=1.052 Sum_probs=31.3
Q ss_pred hhhHHHHHHHHhhccCCCCCccCCCCCCC-CCCceeeeeeeC
Q 003847 32 NTDGVLLLSFKYSVLSDPLGVLGSWNYND-ENPCSWNGVTCA 72 (791)
Q Consensus 32 ~~~~~~ll~~k~~~~~~~~~~l~sw~~~~-~~~c~w~gv~C~ 72 (791)
+.|.++|++||.++..+|.+.+.+|+... .+||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 57899999999999878889999999764 799999999995
No 488
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.72 E-value=9.9e-08 Score=95.50 Aligned_cols=106 Identities=20% Similarity=0.217 Sum_probs=84.7
Q ss_pred HHHHHHHHHHhccCCC--CccceeeEEEccC----ceEEEEeccCCC-ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHH
Q 003847 516 RDFETQVRVIAKLVHP--NLVRIRGFYWGVD----EKLIIYDFVPNG-SLANARYRKMGSSPCHLPWEARLKIAKGVARG 588 (791)
Q Consensus 516 ~~~~~E~~~l~~l~H~--nIv~l~~~~~~~~----~~~lv~e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~g 588 (791)
....+|.+.+.++... .+.+.+++.+... ..++|+|++++. +|.+++..... .+......++.+++..
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~-----~~~~~~~~ll~~l~~~ 130 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ-----LDPSQRRELLRALARL 130 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc-----cchhhHHHHHHHHHHH
Confidence 4677888888887533 3556666665532 358999999874 79888876432 4566788999999999
Q ss_pred HHHHhcCCCeecCCCCCCeEecCCC---CeEEeccCccccc
Q 003847 589 LAFLHEKKHVHGNLKPRNVLLGNDM---EPKIGDFGLERLV 626 (791)
Q Consensus 589 L~yLH~~~ivHrDlkp~NILl~~~~---~~kL~DFGla~~~ 626 (791)
++-||+.||+|+|+++.|||++.++ .+.++||+-++..
T Consensus 131 i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 131 IAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 9999999999999999999999887 7999999988764
No 489
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.66 E-value=2.5e-09 Score=119.16 Aligned_cols=172 Identities=27% Similarity=0.263 Sum_probs=127.0
Q ss_pred CCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEe
Q 003847 80 DSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLN 159 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 159 (791)
...+..++|..|.+.. +-..+..+++|+.|+|.+|+|.+ +...+..+++|++|+|++|+|+...+ +..++.|+.|+
T Consensus 71 l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~ 146 (414)
T KOG0531|consen 71 LTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLDLSFNKITKLEG--LSTLTLLKELN 146 (414)
T ss_pred hHhHHhhccchhhhhh-hhcccccccceeeeeccccchhh-cccchhhhhcchheeccccccccccc--hhhccchhhhe
Confidence 3456666677777764 44557888999999999999984 33337788999999999999984433 66777799999
Q ss_pred CcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCC---CCCcccceeccccccccccCCCCcCCccccEEEccCCcCccc
Q 003847 160 LSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLP---SKFNSVQVLDLSSNLINGSLPPDIGGYSLRYLNLSYNRLSGE 236 (791)
Q Consensus 160 ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~L~~L~ls~N~l~~~~p~~~~~~~L~~L~l~~N~l~g~ 236 (791)
+++|.|+ .+ ..+..+++|+.++|++|++...-+ ..+.+|+.+++++|.+. .+...-....+..+++..|.++ .
T Consensus 147 l~~N~i~-~~-~~~~~l~~L~~l~l~~n~i~~ie~~~~~~~~~l~~l~l~~n~i~-~i~~~~~~~~l~~~~l~~n~i~-~ 222 (414)
T KOG0531|consen 147 LSGNLIS-DI-SGLESLKSLKLLDLSYNRIVDIENDELSELISLEELDLGGNSIR-EIEGLDLLKKLVLLSLLDNKIS-K 222 (414)
T ss_pred eccCcch-hc-cCCccchhhhcccCCcchhhhhhhhhhhhccchHHHhccCCchh-cccchHHHHHHHHhhcccccce-e
Confidence 9999998 33 345668999999999999998777 67789999999999987 2222222235666689999987 3
Q ss_pred CchhHhhcCCC--CcEEEcccCcCccc
Q 003847 237 IPPQFGEKIPV--NATIDLSFNNLTGE 261 (791)
Q Consensus 237 ip~~~~~~l~~--l~~l~l~~N~l~~~ 261 (791)
+-... . +.. |+.+++++|++.-.
T Consensus 223 ~~~l~-~-~~~~~L~~l~l~~n~i~~~ 247 (414)
T KOG0531|consen 223 LEGLN-E-LVMLHLRELYLSGNRISRS 247 (414)
T ss_pred ccCcc-c-chhHHHHHHhcccCccccc
Confidence 32211 1 333 78899999999743
No 490
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.65 E-value=6.8e-09 Score=115.26 Aligned_cols=158 Identities=26% Similarity=0.324 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHhc-CCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCC
Q 003847 582 AKGVARGLAFLHE-KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPG 660 (791)
Q Consensus 582 ~~qi~~gL~yLH~-~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (791)
+.+++.|+.|+|. .++||++|.|++|.++..+..||+.|+++...............
T Consensus 105 l~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd---------------------- 162 (700)
T KOG2137|consen 105 LGNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYD---------------------- 162 (700)
T ss_pred hhcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCC----------------------
Confidence 3455599999997 78999999999999999999999999998766543221110000
Q ss_pred CCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHH-hCCcchhccccCCCCcchhchhHHHHHHHHhhh
Q 003847 661 PSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELL-TGKVIVVDELGQGNGLLVEDKNRAIRLADAAIR 739 (791)
Q Consensus 661 ~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ell-tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (791)
.....-..-...|.|||++.....+.++|+||+||++|.+. .|+..+.............. ..+..
T Consensus 163 -----~~lp~~~~~~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~------~~~~~-- 229 (700)
T KOG2137|consen 163 -----PPLPLLLQPHLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRN------LLNAG-- 229 (700)
T ss_pred -----CCCChhhccCcccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhc------ccccc--
Confidence 00001112345699999999988899999999999999999 45554433211111110000 00000
Q ss_pred cCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 740 ADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 740 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
.+-...+.+.++.+=+.+++..++..||++.++..
T Consensus 230 -~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 230 -AFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLS 264 (700)
T ss_pred -cccccccCcHHHHHHHHHHhcCCcccCcchhhhhc
Confidence 00111235567777788999999999997776644
No 491
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.65 E-value=5e-07 Score=94.60 Aligned_cols=260 Identities=17% Similarity=0.128 Sum_probs=156.0
Q ss_pred ceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhcc-CCCCccceeeE----EE--ccC-ceEEEEe
Q 003847 480 AYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKL-VHPNLVRIRGF----YW--GVD-EKLIIYD 551 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~----~~--~~~-~~~lv~e 551 (791)
+.-||+|+-+.+|-.--- ..-+.|++.........+. +..|... .||-+-.-+.+ .+ +.+ ..-++|+
T Consensus 16 gr~LgqGgea~ly~l~e~--~d~VAKIYh~Pppa~~aqk---~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflmP 90 (637)
T COG4248 16 GRPLGQGGEADLYTLGEV--RDQVAKIYHAPPPAAQAQK---VAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLMP 90 (637)
T ss_pred CccccCCccceeeecchh--hchhheeecCCCchHHHHH---HHHhccCCCCcchhhhhcccHHHhhCCCccceeEEecc
Confidence 456899999999976421 2234577766544322222 2233333 56644331111 11 112 2567888
Q ss_pred ccCCCC-hhHHHH-hhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCC
Q 003847 552 FVPNGS-LANARY-RKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGD 629 (791)
Q Consensus 552 ~~~~gs-L~~~l~-~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 629 (791)
.+++.- +..+.. ..+.+......|.-.++.++.++.+.+.||+.|.+-+|+.++|+|+++++.+.|.|-..-.....+
T Consensus 91 ~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~ng 170 (637)
T COG4248 91 KVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQINANG 170 (637)
T ss_pred cCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccceeeccCC
Confidence 877652 112111 111222335899999999999999999999999999999999999999999999986543332111
Q ss_pred CCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc-----CCCCCCchhhHHHHHHHHH
Q 003847 630 TSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR-----SIKPNPKWDVYSFGVILLE 704 (791)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~-----~~~~~~~sDvwSlGvil~e 704 (791)
. .....+|...|.+||.-. +..-+...|.|.||+++++
T Consensus 171 ~-------------------------------------~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~ 213 (637)
T COG4248 171 T-------------------------------------LHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFH 213 (637)
T ss_pred c-------------------------------------eEecccCccccCCHHHhccccccccCCCccccchhHHHHHHH
Confidence 1 111234788899999864 3445778999999999999
Q ss_pred HHhC-CcchhccccCCCCc-----chhchhHHHHHHHHhhhcCc-----cchHHHHHHHHHHHhhccCCC--CCCCCCHH
Q 003847 705 LLTG-KVIVVDELGQGNGL-----LVEDKNRAIRLADAAIRADF-----EGKEEALLSCFKLGYSCASPL--PQKRPSMK 771 (791)
Q Consensus 705 lltG-~~pf~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~d--P~~RPs~~ 771 (791)
++.| ++||.+.......- -+..... ....+ ...+.. ....-....+.-+..+|+..- +.-|||++
T Consensus 214 lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f-~ya~~-~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~ 291 (637)
T COG4248 214 LLFGGRHPYSGIPLISDAPNPLETDIAHGRF-AYASD-QRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAK 291 (637)
T ss_pred HHhcCCCCCCcccccCCCCCcchhhhhccee-eechh-ccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHH
Confidence 9987 88997632211000 0000000 00000 001111 111223455666777887654 56899999
Q ss_pred HHHHHhccCCCC
Q 003847 772 EALQALEKIPSS 783 (791)
Q Consensus 772 evl~~L~~i~~~ 783 (791)
..+..|.++..+
T Consensus 292 aW~aAl~al~~~ 303 (637)
T COG4248 292 AWVAALDALRQQ 303 (637)
T ss_pred HHHHHHHHHHHh
Confidence 998888765444
No 492
>PRK09902 hypothetical protein; Provisional
Probab=98.59 E-value=9.8e-07 Score=86.45 Aligned_cols=137 Identities=20% Similarity=0.140 Sum_probs=102.4
Q ss_pred cccCceEEEEEEeCCCcEEEEEEcCCC---c---hhhHHHHHHHHHHHhccCCCC--ccceeeEEE-cc----CceEEEE
Q 003847 484 GASGSSIMYKAVLEDGTALAVRRIGEN---S---VDRFRDFETQVRVIAKLVHPN--LVRIRGFYW-GV----DEKLIIY 550 (791)
Q Consensus 484 G~G~~g~Vy~~~~~~g~~vavK~~~~~---~---~~~~~~~~~E~~~l~~l~H~n--Iv~l~~~~~-~~----~~~~lv~ 550 (791)
|+||.+-|++..++ |..+-||+-... + +.....|.+|+..+.+|...+ +.+.. ++. .. -..+||+
T Consensus 27 ~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 27 RRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLVT 104 (216)
T ss_pred CCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEEE
Confidence 67888899998775 447888986521 1 334578999999999985333 44444 332 11 1357999
Q ss_pred eccCC-CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCC--eEEeccCcccc
Q 003847 551 DFVPN-GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDME--PKIGDFGLERL 625 (791)
Q Consensus 551 e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~--~kL~DFGla~~ 625 (791)
|-++| .+|.+++...... +.+...+..++.+++..+.-||+.|+.|+|+-+.||+++.++. ++++||.-++.
T Consensus 105 e~L~g~~~L~~~l~~~~~~---~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 105 EDMAGFISIADWYAQHAVS---PYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EeCCCCccHHHHHhcCCcC---CcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 97753 5888887554322 3677888999999999999999999999999999999986667 99999987764
No 493
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.54 E-value=5.6e-07 Score=100.82 Aligned_cols=150 Identities=17% Similarity=0.309 Sum_probs=101.0
Q ss_pred chHHHhhhcc-eeccccCceEEEEEEeCCCcEEEEEEcCCCchhh------------------------------H----
Q 003847 471 ELETLLKASA-YILGASGSSIMYKAVLEDGTALAVRRIGENSVDR------------------------------F---- 515 (791)
Q Consensus 471 ~~~~~~~~~~-~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~------------------------------~---- 515 (791)
.++++....+ +-|+.++-|.||+|++++|+.||||+.+..-... .
T Consensus 120 ~iee~F~eF~~~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~ 199 (517)
T COG0661 120 PIEELFSEFEPEPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFE 199 (517)
T ss_pred CHHHHHHHcCCCchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHH
Confidence 4556666655 7899999999999999999999999975421110 0
Q ss_pred ------HHHHHHHHHHhccC-----CCCccceeeEEE-ccCceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHH
Q 003847 516 ------RDFETQVRVIAKLV-----HPNLVRIRGFYW-GVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAK 583 (791)
Q Consensus 516 ------~~~~~E~~~l~~l~-----H~nIv~l~~~~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~ 583 (791)
-++.+|...+.+++ .+++ ++=.+|+ -.+...++|||++|-.+.+....... + .+. ..++.
T Consensus 200 ~~l~~ElDy~~EA~n~~~~~~nf~~~~~v-~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~-g---~d~---k~ia~ 271 (517)
T COG0661 200 KRLREELDYRREAANAERFRENFKDDPDV-YVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSA-G---IDR---KELAE 271 (517)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHcCCCCCe-EeceeehhccCCcEEEEEeeCCEecccHHHHHhc-C---CCH---HHHHH
Confidence 02344555555542 2332 2222333 34677899999999999887433321 1 442 33333
Q ss_pred HHHHH-HHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCC
Q 003847 584 GVARG-LAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTG 628 (791)
Q Consensus 584 qi~~g-L~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 628 (791)
.++++ +..+-..|+.|.|..|.||+++.+|.+.+.|||+...+.+
T Consensus 272 ~~~~~f~~q~~~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 272 LLVRAFLRQLLRDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred HHHHHHHHHHHhcCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 33332 3444558999999999999999999999999999887654
No 494
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.49 E-value=4.7e-09 Score=115.64 Aligned_cols=128 Identities=26% Similarity=0.197 Sum_probs=85.3
Q ss_pred CCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC--cccceeccc
Q 003847 129 SQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF--NSVQVLDLS 206 (791)
Q Consensus 129 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l--~~L~~L~ls 206 (791)
..|.+.+.++|.|. ....++.-++.|+.|||++|+++... .+..|+.|++|||+.|.|....--.. ..|..|.|+
T Consensus 164 n~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~L~~L~lr 240 (1096)
T KOG1859|consen 164 NKLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGCKLQLLNLR 240 (1096)
T ss_pred hhHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhhhheeeeec
Confidence 35777777888887 67777777788888888888887433 67778888888888888775322222 347888888
Q ss_pred cccccccCCCCcCCccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcc
Q 003847 207 SNLINGSLPPDIGGYSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTG 260 (791)
Q Consensus 207 ~N~l~~~~p~~~~~~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~ 260 (791)
+|.++ .+-..-...+|+.|||++|-|++.-.-.....|..|..|+|.+|+|.+
T Consensus 241 nN~l~-tL~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 241 NNALT-TLRGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred ccHHH-hhhhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 88776 222211224677888888877754333333336677778888888754
No 495
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.46 E-value=1.8e-08 Score=102.82 Aligned_cols=176 Identities=22% Similarity=0.241 Sum_probs=97.8
Q ss_pred cEEEEEcCCCCCccCCCcC----CCCCCCCCEEeCcCCCCCCC-------------CcccccCCCCccEEEccCCcCCCC
Q 003847 82 RVIGLALPNSQLLGSIPAD----LGMIEFLQYLDLSNNSLNGS-------------LSFSLFNASQLRNLDLSNNLISGH 144 (791)
Q Consensus 82 ~v~~L~L~~~~l~~~~~~~----~~~l~~L~~L~L~~N~l~~~-------------~p~~~~~l~~L~~L~L~~N~l~~~ 144 (791)
+++.|+|++|-+.-.-++. +.+++.|++|+|.||.+.-. ...-...-++|+++..++|++...
T Consensus 93 ~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ 172 (382)
T KOG1909|consen 93 KLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENG 172 (382)
T ss_pred ceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccc
Confidence 6777777777665433332 44566777777777766511 111223345677777777776521
Q ss_pred ----CccccCCCCCCCEEeCcCCcCCCC----CccccCCCCCCCEEeCCCCcCCCC-------CCCCCcccceecccccc
Q 003847 145 ----LPETMGSLHNLQLLNLSDNALAGK----LPVSLTTLQSLTIVSLKNNYFSDG-------LPSKFNSVQVLDLSSNL 209 (791)
Q Consensus 145 ----~p~~~~~l~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~-------~p~~l~~L~~L~ls~N~ 209 (791)
+...|...+.|+.+.++.|.|... +-..|..+++|+.|||..|.|+.. ....|++|+.|+++.+.
T Consensus 173 ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcl 252 (382)
T KOG1909|consen 173 GATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCL 252 (382)
T ss_pred cHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccc
Confidence 233455666777777777766511 123456677777777777776631 22344566777777776
Q ss_pred ccccCCCCc----C--CccccEEEccCCcCccc----CchhHhhcCCCCcEEEcccCcC
Q 003847 210 INGSLPPDI----G--GYSLRYLNLSYNRLSGE----IPPQFGEKIPVNATIDLSFNNL 258 (791)
Q Consensus 210 l~~~~p~~~----~--~~~L~~L~l~~N~l~g~----ip~~~~~~l~~l~~l~l~~N~l 258 (791)
++..-...+ . .++|+.|.|.+|.++-. +-..+.. .+.|..|+|++|.|
T Consensus 253 l~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~e-k~dL~kLnLngN~l 310 (382)
T KOG1909|consen 253 LENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAE-KPDLEKLNLNGNRL 310 (382)
T ss_pred cccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhc-chhhHHhcCCcccc
Confidence 653222222 1 13566777777766421 1122222 55666666666666
No 496
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.41 E-value=8.9e-09 Score=91.10 Aligned_cols=128 Identities=23% Similarity=0.263 Sum_probs=89.8
Q ss_pred CcEEEEEcCCCCCccCCC---cCCCCCCCCCEEeCcCCCCCCCCccccc-CCCCccEEEccCCcCCCCCccccCCCCCCC
Q 003847 81 SRVIGLALPNSQLLGSIP---ADLGMIEFLQYLDLSNNSLNGSLSFSLF-NASQLRNLDLSNNLISGHLPETMGSLHNLQ 156 (791)
Q Consensus 81 ~~v~~L~L~~~~l~~~~~---~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 156 (791)
..+-.++|++++|. .++ ..+.....|+..+|++|.|. ..|..|. .++.++.|+|++|.|+ .+|.++..++.|+
T Consensus 27 kE~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr 103 (177)
T KOG4579|consen 27 KELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALR 103 (177)
T ss_pred HHhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhh
Confidence 34556777777764 333 34555667777889999888 4555554 4568888999999998 7888888899999
Q ss_pred EEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC--cccceeccccccccc
Q 003847 157 LLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF--NSVQVLDLSSNLING 212 (791)
Q Consensus 157 ~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l--~~L~~L~ls~N~l~~ 212 (791)
.|+++.|.|. ..|..+..|.+|..|+..+|.+....-+.| +.+-..++.+|.+.+
T Consensus 104 ~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~eid~dl~~s~~~al~~lgnepl~~ 160 (177)
T KOG4579|consen 104 SLNLRFNPLN-AEPRVIAPLIKLDMLDSPENARAEIDVDLFYSSLPALIKLGNEPLGD 160 (177)
T ss_pred hcccccCccc-cchHHHHHHHhHHHhcCCCCccccCcHHHhccccHHHHHhcCCcccc
Confidence 9999999988 777777778888888888888765333322 223334455555554
No 497
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.39 E-value=1.7e-08 Score=111.32 Aligned_cols=180 Identities=23% Similarity=0.291 Sum_probs=122.6
Q ss_pred CcCCCCCCCCCEEeCcCCCCCCCCcccccCC-CCccEEEccCCcCCC---CCc---cccCC---CCCCCEEeCcCCcCCC
Q 003847 98 PADLGMIEFLQYLDLSNNSLNGSLSFSLFNA-SQLRNLDLSNNLISG---HLP---ETMGS---LHNLQLLNLSDNALAG 167 (791)
Q Consensus 98 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~---~~p---~~~~~---l~~L~~L~ls~N~l~~ 167 (791)
|-.|..+.+|+.|.|.+..|... ..+..+ .+|+.| +-+|.+.. .+. ..+.+ .-.|...+.++|+|.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~~--~GL~~lr~qLe~L-IC~~Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~- 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLSTA--KGLQELRHQLEKL-ICHNSLDALRHVFASCGGDISNSPVWNKLATASFSYNRLV- 177 (1096)
T ss_pred CceeccccceeeEEecCcchhhh--hhhHHHHHhhhhh-hhhccHHHHHHHHHHhccccccchhhhhHhhhhcchhhHH-
Confidence 55567778888888888877631 111111 223332 22333220 000 11111 235788899999998
Q ss_pred CCccccCCCCCCCEEeCCCCcCCCCC-CCCCcccceeccccccccccCCC-CcCCccccEEEccCCcCcccCchhHhhcC
Q 003847 168 KLPVSLTTLQSLTIVSLKNNYFSDGL-PSKFNSVQVLDLSSNLINGSLPP-DIGGYSLRYLNLSYNRLSGEIPPQFGEKI 245 (791)
Q Consensus 168 ~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~l~~L~~L~ls~N~l~~~~p~-~~~~~~L~~L~l~~N~l~g~ip~~~~~~l 245 (791)
....++.-++.|+.|+|++|+++... ...++.|++|||+.|.|+ .+|. ......|+.|+|++|.++ ++- .+.+ |
T Consensus 178 ~mD~SLqll~ale~LnLshNk~~~v~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~L~~L~lrnN~l~-tL~-gie~-L 253 (1096)
T KOG1859|consen 178 LMDESLQLLPALESLNLSHNKFTKVDNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCKLQLLNLRNNALT-TLR-GIEN-L 253 (1096)
T ss_pred hHHHHHHHHHHhhhhccchhhhhhhHHHHhcccccccccccchhc-cccccchhhhhheeeeecccHHH-hhh-hHHh-h
Confidence 77788888999999999999999754 234589999999999998 4442 233357999999999998 432 3444 9
Q ss_pred CCCcEEEcccCcCcccCC--CCCcccccccccccCCCCCCCC
Q 003847 246 PVNATIDLSFNNLTGEIP--ESNVFMNQESSSFSGNLDLCGQ 285 (791)
Q Consensus 246 ~~l~~l~l~~N~l~~~~p--~~~~~~~~~~~~~~~n~~lc~~ 285 (791)
.+|..|||++|-|.+.-- ....++.+..+.+.|||--|..
T Consensus 254 ksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~p 295 (1096)
T KOG1859|consen 254 KSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCAP 295 (1096)
T ss_pred hhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccCH
Confidence 999999999999975432 2255667778889999987753
No 498
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.36 E-value=4.9e-06 Score=84.38 Aligned_cols=139 Identities=14% Similarity=0.117 Sum_probs=85.9
Q ss_pred eeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCC--ccceeeEEEccCceEEEEeccCCCC-
Q 003847 481 YILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPN--LVRIRGFYWGVDEKLIIYDFVPNGS- 557 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~l~~~~~~~~~~~lv~e~~~~gs- 557 (791)
..||+|..+.||+. .|..+++|...... ......+|.++++.+..-. +.+.+++....+...+|||+++|.+
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~ 81 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRS 81 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccc
Confidence 46899999999984 25567889887643 2345788999999886443 4677888777777889999998863
Q ss_pred hhHH--------------HHh---hcCCC-CCCCCHHHHH-HHHH----------HHHH-HHHHHhc----CCCeecCCC
Q 003847 558 LANA--------------RYR---KMGSS-PCHLPWEARL-KIAK----------GVAR-GLAFLHE----KKHVHGNLK 603 (791)
Q Consensus 558 L~~~--------------l~~---~~~~~-~~~l~~~~~~-~i~~----------qi~~-gL~yLH~----~~ivHrDlk 603 (791)
+... +-+ ....- .......... ++-. .+.. ..++|.. ..++|+|+.
T Consensus 82 ~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~ 161 (226)
T TIGR02172 82 FSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQ 161 (226)
T ss_pred hhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCC
Confidence 1111 000 00000 0011111111 0100 0111 1222221 357899999
Q ss_pred CCCeEecCCCCeEEeccCcccc
Q 003847 604 PRNVLLGNDMEPKIGDFGLERL 625 (791)
Q Consensus 604 p~NILl~~~~~~kL~DFGla~~ 625 (791)
|.||++++++ +.++||+.+..
T Consensus 162 ~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 162 IGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred CCcEEEcCCC-cEEEechhcCc
Confidence 9999999887 99999998763
No 499
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.33 E-value=4.8e-06 Score=82.70 Aligned_cols=137 Identities=19% Similarity=0.225 Sum_probs=96.0
Q ss_pred eccccCceEEEEEEeCCCcEEEEEEcCCCchhh-------------------HHH-----HHHHHHHHhccC--CCCccc
Q 003847 482 ILGASGSSIMYKAVLEDGTALAVRRIGENSVDR-------------------FRD-----FETQVRVIAKLV--HPNLVR 535 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~-------------------~~~-----~~~E~~~l~~l~--H~nIv~ 535 (791)
.|..|--+.||+|...++..+|||+++...... .++ .++|+.-|+++. +=.+.+
T Consensus 55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~ 134 (268)
T COG1718 55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPE 134 (268)
T ss_pred eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 677888899999998889999999985421111 000 245777777763 445555
Q ss_pred eeeEEEccCceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCeecCCCCCCeEecCCCC
Q 003847 536 IRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE-KKHVHGNLKPRNVLLGNDME 614 (791)
Q Consensus 536 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~ivHrDlkp~NILl~~~~~ 614 (791)
.+++. ...|||||+..... ....-...++...+...+..++++.+.-|-. .++||+||..-|||+. ++.
T Consensus 135 Pi~~~----~nVLvMEfIg~~g~-----pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~~ 204 (268)
T COG1718 135 PIAFR----NNVLVMEFIGDDGL-----PAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-DGE 204 (268)
T ss_pred ceeec----CCeEEEEeccCCCC-----CCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-CCe
Confidence 55544 34699999954311 0000001123344677888899999988887 9999999999999999 889
Q ss_pred eEEeccCcccccCC
Q 003847 615 PKIGDFGLERLVTG 628 (791)
Q Consensus 615 ~kL~DFGla~~~~~ 628 (791)
+.|+|||.|.....
T Consensus 205 p~iID~~QaV~~~h 218 (268)
T COG1718 205 PYIIDVSQAVTIDH 218 (268)
T ss_pred EEEEECccccccCC
Confidence 99999999887653
No 500
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.28 E-value=7.4e-06 Score=80.63 Aligned_cols=130 Identities=15% Similarity=0.200 Sum_probs=82.9
Q ss_pred eeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHH---------HHHHHHHhccCCC---CccceeeEEEc-----c
Q 003847 481 YILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDF---------ETQVRVIAKLVHP---NLVRIRGFYWG-----V 543 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~---------~~E~~~l~~l~H~---nIv~l~~~~~~-----~ 543 (791)
+++-......|.+... +|+.+++|..........+.| .+++..+.+++.. ..+.++...+- .
T Consensus 37 kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ekk~~~~~ 115 (229)
T PF06176_consen 37 KVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAEKKIFRYT 115 (229)
T ss_pred EeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeeeeeeccce
Confidence 3444444555555555 478899998876533322222 3344444444332 22332222221 2
Q ss_pred CceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcc
Q 003847 544 DEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLE 623 (791)
Q Consensus 544 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla 623 (791)
...+++|||++|..|.+... +++ .++..+.+++.-||+.|++|+|..|.|++++.+ .++++||+..
T Consensus 116 ~~~~ll~EYIeG~~l~d~~~---------i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~-~i~iID~~~k 181 (229)
T PF06176_consen 116 SSYVLLMEYIEGVELNDIED---------IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNN-GIRIIDTQGK 181 (229)
T ss_pred eEEEEEEEEecCeecccchh---------cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEECC-cEEEEECccc
Confidence 34568999999988866421 332 245667788999999999999999999999865 5999999876
Q ss_pred cc
Q 003847 624 RL 625 (791)
Q Consensus 624 ~~ 625 (791)
+.
T Consensus 182 ~~ 183 (229)
T PF06176_consen 182 RM 183 (229)
T ss_pred cc
Confidence 54
Done!